locus-tag class description LPH39_00020 PF00448 SRP54-type protein, GTPase domain LPH39_00020 PF02881 SRP54-type protein, helical bundle domain LPH39_00025 PF00633 Helix-hairpin-helix motif LPH39_00025 PF00730 HhH-GPD superfamily base excision DNA repair protein LPH39_00025 PF14815 NUDIX domain LPH39_00030 PF04362 Bacterial Fe(2+) trafficking LPH39_00040 PF01709 Transcriptional regulator LPH39_00045 PF02075 Crossover junction endodeoxyribonuclease RuvC LPH39_00050 PF07499 RuvA, C-terminal domain LPH39_00050 PF01330 RuvA N terminal domain LPH39_00055 PF02705 K+ potassium transporter LPH39_00060 PF05496 Holliday junction DNA helicase RuvB P-loop domain LPH39_00060 PF05491 RuvB C-terminal winged helix domain LPH39_00060 PF17864 RuvB AAA lid domain LPH39_00065 PF03061 Thioesterase superfamily LPH39_00070 PF01618 MotA/TolQ/ExbB proton channel family LPH39_00075 PF02472 Biopolymer transport protein ExbD/TolR LPH39_00085 PF07676 WD40-like Beta Propeller Repeat LPH39_00085 PF04052 TolB amino-terminal domain LPH39_00090 PF00691 OmpA family LPH39_00100 PF04055 Radical SAM superfamily LPH39_00105 PF00300 Histidine phosphatase superfamily (branch 1) LPH39_00110 PF04493 Endonuclease V LPH39_00115 PF00854 POT family LPH39_00120 PF00255 Glutathione peroxidase LPH39_00125 PF00175 Oxidoreductase NAD-binding domain LPH39_00125 PF00970 Oxidoreductase FAD-binding domain LPH39_00130 PF13667 ThiC-associated domain LPH39_00130 PF01964 Radical SAM ThiC family LPH39_00135 PF10459 Peptidase S46 LPH39_00140 PF00300 Histidine phosphatase superfamily (branch 1) LPH39_00150 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ LPH39_00155 PF04221 RelB antitoxin LPH39_00230 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system LPH39_00285 PF06508 Queuosine biosynthesis protein QueC LPH39_00290 PF02938 GAD domain LPH39_00290 PF00152 tRNA synthetases class II (D, K and N) LPH39_00290 PF01336 OB-fold nucleic acid binding domain LPH39_00310 PF05683 Fumarase C-terminus LPH39_00310 PF05681 Fumarate hydratase (Fumerase) LPH39_00330 PF01648 4'-phosphopantetheinyl transferase superfamily LPH39_00335 PF02527 rRNA small subunit methyltransferase G LPH39_00340 PF02779 Transketolase, pyrimidine binding domain LPH39_00340 PF02780 Transketolase, C-terminal domain LPH39_00340 PF00456 Transketolase, thiamine diphosphate binding domain LPH39_00345 PF00375 Sodium:dicarboxylate symporter family LPH39_00355 PF01625 Peptide methionine sulfoxide reductase LPH39_00370 PF01432 Peptidase family M3 LPH39_00375 PF06903 VirK protein LPH39_00380 PF02875 Mur ligase family, glutamate ligase domain LPH39_00380 PF08245 Mur ligase middle domain LPH39_00395 PF00156 Phosphoribosyl transferase domain LPH39_00405 PF00072 Response regulator receiver domain LPH39_00405 PF01339 CheB methylesterase LPH39_00410 PF01584 CheW-like domain LPH39_00410 PF02895 Signal transducing histidine kinase, homodimeric domain LPH39_00410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH39_00410 PF01627 Hpt domain LPH39_00410 PF00072 Response regulator receiver domain LPH39_00415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LPH39_00415 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LPH39_00420 PF01584 CheW-like domain LPH39_00425 PF00072 Response regulator receiver domain LPH39_00430 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain LPH39_00430 PF02951 Prokaryotic glutathione synthetase, N-terminal domain LPH39_00445 PF02092 Glycyl-tRNA synthetase beta subunit LPH39_00445 PF05746 DALR anticodon binding domain LPH39_00450 PF02091 Glycyl-tRNA synthetase alpha subunit LPH39_00455 PF00795 Carbon-nitrogen hydrolase LPH39_00455 PF02540 NAD synthase LPH39_00475 PF03692 Putative zinc- or iron-chelating domain LPH39_00490 PF00561 alpha/beta hydrolase fold LPH39_00500 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LPH39_00500 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LPH39_00510 PF00588 SpoU rRNA Methylase family LPH39_00520 PF01808 AICARFT/IMPCHase bienzyme LPH39_00520 PF02142 MGS-like domain LPH39_00525 PF02843 Phosphoribosylglycinamide synthetase, C domain LPH39_00525 PF02844 Phosphoribosylglycinamide synthetase, N domain LPH39_00525 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LPH39_00545 PF12805 FUSC-like inner membrane protein yccS LPH39_00555 PF03186 CobD/Cbib protein LPH39_00560 PF03895 YadA-like membrane anchor domain LPH39_00560 PF05658 Head domain of trimeric autotransporter adhesin LPH39_00560 PF05662 Coiled stalk of trimeric autotransporter adhesin LPH39_00565 PF01227 GTP cyclohydrolase I LPH39_00575 PF00132 Bacterial transferase hexapeptide (six repeats) LPH39_00580 PF00588 SpoU rRNA Methylase family LPH39_00580 PF08032 RNA 2'-O ribose methyltransferase substrate binding LPH39_00585 PF00773 RNB domain LPH39_00585 PF00575 S1 RNA binding domain LPH39_00585 PF17876 Cold shock domain LPH39_00585 PF08461 Ribonuclease R winged-helix domain LPH39_00585 PF08206 Ribonuclease B OB domain LPH39_00595 PF00959 Phage lysozyme LPH39_00665 PF02129 X-Pro dipeptidyl-peptidase (S15 family) LPH39_00670 PF07690 Major Facilitator Superfamily LPH39_00675 PF03466 LysR substrate binding domain LPH39_00675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH39_00690 PF01161 Phosphatidylethanolamine-binding protein LPH39_00695 PF00719 Inorganic pyrophosphatase LPH39_00705 PF00085 Thioredoxin LPH39_00715 PF13603 Leucyl-tRNA synthetase, Domain 2 LPH39_00715 PF00133 tRNA synthetases class I (I, L, M and V) LPH39_00715 PF08264 Anticodon-binding domain of tRNA LPH39_00730 PF01467 Cytidylyltransferase-like LPH39_00745 PF13406 Transglycosylase SLT domain LPH39_00750 PF03330 Lytic transglycolase LPH39_00750 PF05036 Sporulation related domain LPH39_00855 PF13332 Hemagglutinin repeat LPH39_00855 PF05860 haemagglutination activity domain LPH39_00855 PF15605 Bacterial toxin 28 LPH39_00855 PF04829 Pre-toxin domain with VENN motif LPH39_00885 PF04829 Pre-toxin domain with VENN motif LPH39_00885 PF05860 haemagglutination activity domain LPH39_00885 PF13332 Hemagglutinin repeat LPH39_00890 PF05860 haemagglutination activity domain LPH39_00890 PF04829 Pre-toxin domain with VENN motif LPH39_00890 PF13018 Extended Signal Peptide of Type V secretion system LPH39_00890 PF13332 Hemagglutinin repeat LPH39_00985 PF13332 Hemagglutinin repeat LPH39_00985 PF05860 haemagglutination activity domain LPH39_00985 PF15605 Bacterial toxin 28 LPH39_00985 PF04829 Pre-toxin domain with VENN motif LPH39_00985 PF05860 haemagglutination activity domain LPH39_00985 PF13332 Hemagglutinin repeat LPH39_00985 PF15605 Bacterial toxin 28 LPH39_00985 PF04829 Pre-toxin domain with VENN motif LPH39_00990 PF13332 Hemagglutinin repeat LPH39_00990 PF13018 Extended Signal Peptide of Type V secretion system LPH39_00990 PF05860 haemagglutination activity domain LPH39_00990 PF04829 Pre-toxin domain with VENN motif LPH39_01005 PF01810 LysE type translocator LPH39_01025 PF01132 Elongation factor P (EF-P) OB domain LPH39_01025 PF09285 Elongation factor P, C-terminal LPH39_01025 PF08207 Elongation factor P (EF-P) KOW-like domain LPH39_01030 PF01565 FAD binding domain LPH39_01030 PF02913 FAD linked oxidases, C-terminal domain LPH39_01035 PF01842 ACT domain LPH39_01035 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LPH39_01035 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LPH39_01040 PF13520 Amino acid permease LPH39_01045 PF13520 Amino acid permease LPH39_01050 PF00596 Class II Aldolase and Adducin N-terminal domain LPH39_01055 PF03079 ARD/ARD' family LPH39_01085 PF01502 Phosphoribosyl-AMP cyclohydrolase LPH39_01085 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LPH39_01090 PF00977 Histidine biosynthesis protein LPH39_01095 PF00977 Histidine biosynthesis protein LPH39_01100 PF00117 Glutamine amidotransferase class-I LPH39_01105 PF00475 Imidazoleglycerol-phosphate dehydratase LPH39_01110 PF00155 Aminotransferase class I and II LPH39_01115 PF00815 Histidinol dehydrogenase LPH39_01120 PF08029 HisG, C-terminal domain LPH39_01120 PF01634 ATP phosphoribosyltransferase LPH39_01135 PF13393 Histidyl-tRNA synthetase LPH39_01135 PF03129 Anticodon binding domain LPH39_01140 PF14821 Threonine synthase N terminus LPH39_01140 PF00291 Pyridoxal-phosphate dependent enzyme LPH39_01145 PF00288 GHMP kinases N terminal domain LPH39_01145 PF08544 GHMP kinases C terminal LPH39_01150 PF03447 Homoserine dehydrogenase, NAD binding domain LPH39_01150 PF13840 ACT domain LPH39_01150 PF00742 Homoserine dehydrogenase LPH39_01150 PF01842 ACT domain LPH39_01150 PF00696 Amino acid kinase family LPH39_01160 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LPH39_01160 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LPH39_01165 PF03652 Holliday junction resolvase LPH39_01170 PF02622 Uncharacterized ACR, COG1678 LPH39_01175 PF00768 D-alanyl-D-alanine carboxypeptidase LPH39_01175 PF07943 Penicillin-binding protein 5, C-terminal domain LPH39_01180 PF00141 Peroxidase LPH39_01185 PF01556 DnaJ C terminal domain LPH39_01185 PF00226 DnaJ domain LPH39_01195 PF00905 Penicillin binding protein transpeptidase domain LPH39_01195 PF00912 Transglycosylase LPH39_01195 PF06832 Penicillin-Binding Protein C-terminus Family LPH39_01200 PF00593 TonB dependent receptor LPH39_01200 PF07715 TonB-dependent Receptor Plug Domain LPH39_01220 PF04542 Sigma-70 region 2 LPH39_01220 PF08281 Sigma-70, region 4 LPH39_01230 PF13180 PDZ domain LPH39_01235 PF00009 Elongation factor Tu GTP binding domain LPH39_01235 PF03144 Elongation factor Tu domain 2 LPH39_01235 PF06421 GTP-binding protein LepA C-terminus LPH39_01235 PF00679 Elongation factor G C-terminus LPH39_01240 PF10502 Signal peptidase, peptidase S26 LPH39_01250 PF00035 Double-stranded RNA binding motif LPH39_01250 PF14622 Ribonuclease-III-like LPH39_01255 PF01926 50S ribosome-binding GTPase LPH39_01255 PF07650 KH domain LPH39_01260 PF11967 Recombination protein O N terminal LPH39_01260 PF02565 Recombination protein O C terminal LPH39_01265 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LPH39_01265 PF02780 Transketolase, C-terminal domain LPH39_01265 PF02779 Transketolase, pyrimidine binding domain LPH39_01275 PF00474 Sodium:solute symporter family LPH39_01285 PF16177 Acetyl-coenzyme A synthetase N-terminus LPH39_01285 PF00501 AMP-binding enzyme LPH39_01285 PF13193 AMP-binding enzyme C-terminal domain LPH39_01290 PF02659 Putative manganese efflux pump LPH39_01295 PF00106 short chain dehydrogenase LPH39_01310 PF13360 PQQ-like domain LPH39_01315 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region LPH39_01315 PF07676 WD40-like Beta Propeller Repeat LPH39_01315 PF00326 Prolyl oligopeptidase family LPH39_01320 PF03169 OPT oligopeptide transporter protein LPH39_01325 PF01266 FAD dependent oxidoreductase LPH39_01325 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LPH39_01330 PF00230 Major intrinsic protein LPH39_01335 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LPH39_01335 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LPH39_01350 PF08267 Cobalamin-independent synthase, N-terminal domain LPH39_01350 PF01717 Cobalamin-independent synthase, Catalytic domain LPH39_01355 PF02677 Epoxyqueuosine reductase QueH LPH39_01365 PF00501 AMP-binding enzyme LPH39_01375 PF00535 Glycosyl transferase family 2 LPH39_01380 PF01370 NAD dependent epimerase/dehydratase family LPH39_01385 PF02195 ParB-like nuclease domain LPH39_01385 PF17762 HTH domain found in ParB protein LPH39_01390 PF13614 AAA domain LPH39_01405 PF02403 Seryl-tRNA synthetase N-terminal domain LPH39_01405 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LPH39_01410 PF03544 Gram-negative bacterial TonB protein C-terminal LPH39_01415 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LPH39_01420 PF01817 Chorismate mutase type II LPH39_01420 PF00800 Prephenate dehydratase LPH39_01420 PF01842 ACT domain LPH39_01425 PF00266 Aminotransferase class-V LPH39_01435 PF12679 ABC-2 family transporter protein LPH39_01440 PF00005 ABC transporter LPH39_01470 PF00440 Bacterial regulatory proteins, tetR family LPH39_01475 PF01209 ubiE/COQ5 methyltransferase family LPH39_01485 PF00294 pfkB family carbohydrate kinase LPH39_01490 PF07690 Major Facilitator Superfamily LPH39_01500 PF04102 SlyX LPH39_01505 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LPH39_01505 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LPH39_01505 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LPH39_01510 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LPH39_01510 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LPH39_01515 PF00255 Glutathione peroxidase LPH39_01525 PF00005 ABC transporter LPH39_01540 PF00206 Lyase LPH39_01540 PF10415 Fumarase C C-terminus LPH39_01545 PF08328 Adenylosuccinate lyase C-terminal LPH39_01545 PF00206 Lyase LPH39_01550 PF08007 Cupin superfamily protein LPH39_01555 PF16078 2-oxoglutarate dehydrogenase N-terminus LPH39_01555 PF00676 Dehydrogenase E1 component LPH39_01555 PF16870 2-oxoglutarate dehydrogenase C-terminal LPH39_01555 PF02779 Transketolase, pyrimidine binding domain LPH39_01560 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LPH39_01560 PF00364 Biotin-requiring enzyme LPH39_01560 PF02817 e3 binding domain LPH39_01570 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LPH39_01570 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPH39_01580 PF00899 ThiF family LPH39_01595 PF00325 Bacterial regulatory proteins, crp family LPH39_01595 PF00027 Cyclic nucleotide-binding domain LPH39_01600 PF02675 S-adenosylmethionine decarboxylase LPH39_01605 PF03232 Ubiquinone biosynthesis protein COQ7 LPH39_01610 PF00572 Ribosomal protein L13 LPH39_01615 PF00380 Ribosomal protein S9/S16 LPH39_01620 PF00285 Citrate synthase, C-terminal domain LPH39_01625 PF01197 Ribosomal protein L31 LPH39_01630 PF00814 Glycoprotease family LPH39_01635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH39_01635 PF03466 LysR substrate binding domain LPH39_01640 PF13192 Thioredoxin domain LPH39_01640 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPH39_01645 PF10417 C-terminal domain of 1-Cys peroxiredoxin LPH39_01645 PF00578 AhpC/TSA family LPH39_01650 PF05658 Head domain of trimeric autotransporter adhesin LPH39_01650 PF03895 YadA-like membrane anchor domain LPH39_01650 PF05662 Coiled stalk of trimeric autotransporter adhesin LPH39_01650 PF13018 Extended Signal Peptide of Type V secretion system LPH39_01655 PF03958 Bacterial type II/III secretion system short domain LPH39_01655 PF00263 Bacterial type II and III secretion system protein LPH39_01665 PF10741 Type II secretion system (T2SS), protein M subtype b LPH39_01670 PF05137 Fimbrial assembly protein (PilN) LPH39_01675 PF03934 Type II secretion system (T2SS), protein K LPH39_01685 PF03934 Type II secretion system (T2SS), protein K LPH39_01695 PF07963 Prokaryotic N-terminal methylation motif LPH39_01700 PF12019 Type II transport protein GspH LPH39_01705 PF08334 Type II secretion system (T2SS), protein G LPH39_01710 PF00482 Type II secretion system (T2SS), protein F LPH39_01715 PF00437 Type II/IV secretion system protein LPH39_01715 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LPH39_01735 PF17827 PrmC N-terminal domain LPH39_01735 PF05175 Methyltransferase small domain LPH39_01745 PF00561 alpha/beta hydrolase fold LPH39_01760 PF04055 Radical SAM superfamily LPH39_01760 PF06969 HemN C-terminal domain LPH39_01765 PF01725 Ham1 family LPH39_01770 PF03725 3' exoribonuclease family, domain 2 LPH39_01770 PF01138 3' exoribonuclease family, domain 1 LPH39_01775 PF03755 YicC-like family, N-terminal region LPH39_01775 PF08340 Domain of unknown function (DUF1732) LPH39_01780 PF00625 Guanylate kinase LPH39_01785 PF01192 RNA polymerase Rpb6 LPH39_01790 PF00009 Elongation factor Tu GTP binding domain LPH39_01795 PF01507 Phosphoadenosine phosphosulfate reductase family LPH39_01800 PF00258 Flavodoxin LPH39_01800 PF00175 Oxidoreductase NAD-binding domain LPH39_01800 PF00667 FAD binding domain LPH39_01805 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LPH39_01805 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LPH39_01810 PF01507 Phosphoadenosine phosphosulfate reductase family LPH39_01835 PF13369 Transglutaminase-like superfamily LPH39_01870 PF11838 ERAP1-like C-terminal domain LPH39_01870 PF01433 Peptidase family M1 domain LPH39_01875 PF01209 ubiE/COQ5 methyltransferase family LPH39_01885 PF00004 ATPase family associated with various cellular activities (AAA) LPH39_01885 PF07724 AAA domain (Cdc48 subfamily) LPH39_01885 PF10431 C-terminal, D2-small domain, of ClpB protein LPH39_01890 PF00227 Proteasome subunit LPH39_01900 PF02899 Phage integrase, N-terminal SAM-like domain LPH39_01900 PF00589 Phage integrase family LPH39_01910 PF01678 Diaminopimelate epimerase LPH39_01920 PF00326 Prolyl oligopeptidase family LPH39_01920 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LPH39_01930 PF02082 Transcriptional regulator LPH39_01935 PF01458 Uncharacterized protein family (UPF0051) LPH39_01940 PF00005 ABC transporter LPH39_01945 PF01458 Uncharacterized protein family (UPF0051) LPH39_01950 PF00266 Aminotransferase class-V LPH39_01955 PF00355 Rieske [2Fe-2S] domain LPH39_01960 PF00534 Glycosyl transferases group 1 LPH39_01960 PF13439 Glycosyltransferase Family 4 LPH39_01965 PF01522 Polysaccharide deacetylase LPH39_01970 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LPH39_01970 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LPH39_01970 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LPH39_01970 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LPH39_01975 PF01039 Carboxyl transferase domain LPH39_01975 PF17848 Acetyl-coA carboxylase zinc finger domain LPH39_01995 PF01979 Amidohydrolase family LPH39_02000 PF01380 SIS domain LPH39_02010 PF07690 Major Facilitator Superfamily LPH39_02020 PF02685 Glucokinase LPH39_02045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH39_02045 PF00512 His Kinase A (phospho-acceptor) domain LPH39_02060 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LPH39_02065 PF00004 ATPase family associated with various cellular activities (AAA) LPH39_02065 PF16193 AAA C-terminal domain LPH39_02065 PF12002 MgsA AAA+ ATPase C terminal LPH39_02070 PF03548 Outer membrane lipoprotein carrier protein LolA LPH39_02085 PF17854 FtsK alpha domain LPH39_02085 PF09397 Ftsk gamma domain LPH39_02085 PF01580 FtsK/SpoIIIE family LPH39_02085 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LPH39_02090 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPH39_02100 PF03588 Leucyl/phenylalanyl-tRNA protein transferase LPH39_02105 PF01176 Translation initiation factor 1A / IF-1 LPH39_02110 PF00004 ATPase family associated with various cellular activities (AAA) LPH39_02110 PF07724 AAA domain (Cdc48 subfamily) LPH39_02110 PF17871 AAA lid domain LPH39_02110 PF02861 Clp amino terminal domain, pathogenicity island component LPH39_02110 PF10431 C-terminal, D2-small domain, of ClpB protein LPH39_02115 PF02617 ATP-dependent Clp protease adaptor protein ClpS LPH39_02120 PF00293 NUDIX domain LPH39_02130 PF04356 Protein of unknown function (DUF489) LPH39_02145 PF01323 DSBA-like thioredoxin domain LPH39_02155 PF01926 50S ribosome-binding GTPase LPH39_02160 PF04107 Glutamate-cysteine ligase family 2(GCS2) LPH39_02170 PF00202 Aminotransferase class-III LPH39_02175 PF00027 Cyclic nucleotide-binding domain LPH39_02175 PF00520 Ion transport protein LPH39_02180 PF02899 Phage integrase, N-terminal SAM-like domain LPH39_02180 PF00589 Phage integrase family LPH39_02185 PF13098 Thioredoxin-like domain LPH39_02185 PF10411 Disulfide bond isomerase protein N-terminus LPH39_02190 PF02769 AIR synthase related protein, C-terminal domain LPH39_02190 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal LPH39_02190 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LPH39_02200 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LPH39_02210 PF01380 SIS domain LPH39_02210 PF00571 CBS domain LPH39_02230 PF12399 Branched-chain amino acid ATP-binding cassette transporter LPH39_02230 PF00005 ABC transporter LPH39_02235 PF04963 Sigma-54 factor, core binding domain LPH39_02235 PF00309 Sigma-54 factor, Activator interacting domain (AID) LPH39_02235 PF04552 Sigma-54, DNA binding domain LPH39_02240 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LPH39_02245 PF02603 HPr Serine kinase N terminus LPH39_02245 PF07475 HPr Serine kinase C-terminal domain LPH39_02250 PF03668 P-loop ATPase protein family LPH39_02260 PF00381 PTS HPr component phosphorylation site LPH39_02265 PF02896 PEP-utilising enzyme, TIM barrel domain LPH39_02265 PF00391 PEP-utilising enzyme, mobile domain LPH39_02265 PF05524 PEP-utilising enzyme, N-terminal LPH39_02270 PF03448 MgtE intracellular N domain LPH39_02270 PF01769 Divalent cation transporter LPH39_02270 PF00571 CBS domain LPH39_02275 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LPH39_02315 PF08281 Sigma-70, region 4 LPH39_02315 PF04542 Sigma-70 region 2 LPH39_02325 PF00082 Subtilase family LPH39_02330 PF00436 Single-strand binding protein family LPH39_02335 PF00348 Polyprenyl synthetase LPH39_02340 PF06481 COX Aromatic Rich Motif LPH39_02340 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LPH39_02345 PF00115 Cytochrome C and Quinol oxidase polypeptide I LPH39_02350 PF00510 Cytochrome c oxidase subunit III LPH39_02355 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LPH39_02360 PF02347 Glycine cleavage system P-protein LPH39_02370 PF04408 Helicase associated domain (HA2) LPH39_02370 PF00270 DEAD/DEAH box helicase LPH39_02370 PF11898 Domain of unknown function (DUF3418) LPH39_02370 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LPH39_02370 PF00271 Helicase conserved C-terminal domain LPH39_02375 PF00210 Ferritin-like domain LPH39_02380 PF00270 DEAD/DEAH box helicase LPH39_02380 PF00271 Helicase conserved C-terminal domain LPH39_02380 PF00570 HRDC domain LPH39_02380 PF16124 RecQ zinc-binding LPH39_02380 PF09382 RQC domain LPH39_02400 PF00296 Luciferase-like monooxygenase LPH39_02405 PF18073 Rubredoxin metal binding domain LPH39_02415 PF00290 Tryptophan synthase alpha chain LPH39_02420 PF00291 Pyridoxal-phosphate dependent enzyme LPH39_02425 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LPH39_02430 PF01416 tRNA pseudouridine synthase LPH39_02440 PF01118 Semialdehyde dehydrogenase, NAD binding domain LPH39_02440 PF02774 Semialdehyde dehydrogenase, dimerisation domain LPH39_02450 PF01264 Chorismate synthase LPH39_02455 PF05175 Methyltransferase small domain LPH39_02465 PF06594 Haemolysin-type calcium binding protein related domain LPH39_02465 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) LPH39_02520 PF00348 Polyprenyl synthetase LPH39_02525 PF02609 Exonuclease VII small subunit LPH39_02530 PF11734 TilS substrate C-terminal domain LPH39_02530 PF01171 PP-loop family LPH39_02530 PF09179 TilS substrate binding domain LPH39_02540 PF00375 Sodium:dicarboxylate symporter family LPH39_02545 PF00877 NlpC/P60 family LPH39_02550 PF00877 NlpC/P60 family LPH39_02555 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LPH39_02560 PF04235 Protein of unknown function (DUF418) LPH39_02585 PF10576 Iron-sulfur binding domain of endonuclease III LPH39_02585 PF00633 Helix-hairpin-helix motif LPH39_02585 PF00730 HhH-GPD superfamily base excision DNA repair protein LPH39_02600 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LPH39_02600 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LPH39_02605 PF00293 NUDIX domain LPH39_02630 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LPH39_02630 PF01488 Shikimate / quinate 5-dehydrogenase LPH39_02630 PF08501 Shikimate dehydrogenase substrate binding domain LPH39_02635 PF08543 Phosphomethylpyrimidine kinase LPH39_02635 PF02581 Thiamine monophosphate synthase LPH39_02655 PF02683 Cytochrome C biogenesis protein transmembrane region LPH39_02655 PF11412 Disulphide bond corrector protein DsbC LPH39_02660 PF03091 CutA1 divalent ion tolerance protein LPH39_02665 PF00166 Chaperonin 10 Kd subunit LPH39_02670 PF00118 TCP-1/cpn60 chaperonin family LPH39_02695 PF01370 NAD dependent epimerase/dehydratase family LPH39_02700 PF01370 NAD dependent epimerase/dehydratase family LPH39_02705 PF16363 GDP-mannose 4,6 dehydratase LPH39_02720 PF00291 Pyridoxal-phosphate dependent enzyme LPH39_02740 PF00593 TonB dependent receptor LPH39_02740 PF07715 TonB-dependent Receptor Plug Domain LPH39_02745 PF18331 PKHD-type hydroxylase C-terminal domain LPH39_02745 PF13640 2OG-Fe(II) oxygenase superfamily LPH39_02765 PF02424 ApbE family LPH39_02770 PF00175 Oxidoreductase NAD-binding domain LPH39_02770 PF00667 FAD binding domain LPH39_02770 PF00258 Flavodoxin LPH39_02785 PF01636 Phosphotransferase enzyme family LPH39_02790 PF00483 Nucleotidyl transferase LPH39_02795 PF00308 Bacterial dnaA protein LPH39_02800 PF01594 AI-2E family transporter LPH39_02810 PF02769 AIR synthase related protein, C-terminal domain LPH39_02810 PF00586 AIR synthase related protein, N-terminal domain LPH39_02815 PF00551 Formyl transferase LPH39_02830 PF02223 Thymidylate kinase LPH39_02835 PF05649 Peptidase family M13 LPH39_02835 PF01431 Peptidase family M13 LPH39_02840 PF07977 FabA-like domain LPH39_02845 PF01171 PP-loop family LPH39_02850 PF04381 Putative exonuclease, RdgC LPH39_02860 PF00762 Ferrochelatase LPH39_02870 PF02416 mttA/Hcf106 family LPH39_02875 PF02416 mttA/Hcf106 family LPH39_02880 PF00902 Sec-independent protein translocase protein (TatC) LPH39_02890 PF00117 Glutamine amidotransferase class-I LPH39_02890 PF00958 GMP synthase C terminal domain LPH39_02890 PF02540 NAD synthase LPH39_02895 PF00127 Copper binding proteins, plastocyanin/azurin family LPH39_02900 PF03193 RsgA GTPase LPH39_02905 PF02021 Uncharacterised protein family UPF0102 LPH39_02910 PF04348 LppC putative lipoprotein LPH39_02915 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LPH39_02920 PF07715 TonB-dependent Receptor Plug Domain LPH39_02920 PF00593 TonB dependent receptor LPH39_02925 PF09334 tRNA synthetases class I (M) LPH39_02925 PF01588 Putative tRNA binding domain LPH39_02935 PF04060 Putative Fe-S cluster LPH39_02980 PF07687 Peptidase dimerisation domain LPH39_02980 PF01546 Peptidase family M20/M25/M40 LPH39_03005 PF05567 Neisseria PilC beta-propeller domain LPH39_03030 PF11892 Domain of unknown function (DUF3412) LPH39_03030 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases LPH39_03030 PF03641 Possible lysine decarboxylase LPH39_03035 PF00563 EAL domain LPH39_03035 PF12792 CSS motif domain associated with EAL LPH39_03045 PF00899 ThiF family LPH39_03050 PF01926 50S ribosome-binding GTPase LPH39_03050 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LPH39_03055 PF13360 PQQ-like domain LPH39_03055 PF01011 PQQ enzyme repeat LPH39_03075 PF04055 Radical SAM superfamily LPH39_03080 PF00334 Nucleoside diphosphate kinase LPH39_03085 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LPH39_03085 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LPH39_03090 PF00709 Adenylosuccinate synthetase LPH39_03100 PF01145 SPFH domain / Band 7 family LPH39_03105 PF01145 SPFH domain / Band 7 family LPH39_03105 PF12221 Bacterial membrane protein N terminal LPH39_03110 PF08240 Alcohol dehydrogenase GroES-like domain LPH39_03110 PF00107 Zinc-binding dehydrogenase LPH39_03115 PF00072 Response regulator receiver domain LPH39_03130 PF03129 Anticodon binding domain LPH39_03130 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LPH39_03130 PF04073 Aminoacyl-tRNA editing domain LPH39_03140 PF01066 CDP-alcohol phosphatidyltransferase LPH39_03150 PF00583 Acetyltransferase (GNAT) family LPH39_03165 PF00933 Glycosyl hydrolase family 3 N terminal domain LPH39_03165 PF01915 Glycosyl hydrolase family 3 C-terminal domain LPH39_03165 PF14310 Fibronectin type III-like domain LPH39_03170 PF00924 Mechanosensitive ion channel LPH39_03175 PF02152 Dihydroneopterin aldolase LPH39_03180 PF00814 Glycoprotease family LPH39_03185 PF01165 Ribosomal protein S21 LPH39_03190 PF09424 Yqey-like protein LPH39_03195 PF03631 Virulence factor BrkB LPH39_03200 PF08278 DNA primase DnaG DnaB-binding LPH39_03200 PF08275 DNA primase catalytic core, N-terminal domain LPH39_03200 PF01807 CHC2 zinc finger LPH39_03200 PF10410 DnaB-helicase binding domain of primase LPH39_03210 PF00579 tRNA synthetases class I (W and Y) LPH39_03215 PF13538 UvrD-like helicase C-terminal domain LPH39_03220 PF12705 PD-(D/E)XK nuclease superfamily LPH39_03220 PF00580 UvrD/REP helicase N-terminal domain LPH39_03220 PF13361 UvrD-like helicase C-terminal domain LPH39_03225 PF17946 RecC C-terminal domain LPH39_03230 PF00005 ABC transporter LPH39_03235 PF02405 Permease MlaE LPH39_03240 PF02470 MlaD protein LPH39_03245 PF05494 MlaC protein LPH39_03255 PF04333 MlaA lipoprotein LPH39_03260 PF02646 RmuC family LPH39_03265 PF00005 ABC transporter LPH39_03280 PF13520 Amino acid permease LPH39_03290 PF17785 PUA-like domain LPH39_03290 PF10672 S-adenosylmethionine-dependent methyltransferase LPH39_03295 PF03741 Integral membrane protein TerC family LPH39_03310 PF01521 Iron-sulphur cluster biosynthesis LPH39_03325 PF00072 Response regulator receiver domain LPH39_03325 PF00486 Transcriptional regulatory protein, C terminal LPH39_03330 PF00672 HAMP domain LPH39_03330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH39_03330 PF00512 His Kinase A (phospho-acceptor) domain LPH39_03330 PF01627 Hpt domain LPH39_03330 PF00072 Response regulator receiver domain LPH39_03330 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LPH39_03335 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LPH39_03335 PF01627 Hpt domain LPH39_03335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH39_03335 PF00672 HAMP domain LPH39_03335 PF00512 His Kinase A (phospho-acceptor) domain LPH39_03335 PF00072 Response regulator receiver domain LPH39_03340 PF00210 Ferritin-like domain LPH39_03365 PF02773 S-adenosylmethionine synthetase, C-terminal domain LPH39_03365 PF02772 S-adenosylmethionine synthetase, central domain LPH39_03365 PF00438 S-adenosylmethionine synthetase, N-terminal domain LPH39_03375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH39_03380 PF00486 Transcriptional regulatory protein, C terminal LPH39_03380 PF00072 Response regulator receiver domain LPH39_03390 PF01207 Dihydrouridine synthase (Dus) LPH39_03395 PF00593 TonB dependent receptor LPH39_03395 PF07715 TonB-dependent Receptor Plug Domain LPH39_03410 PF07724 AAA domain (Cdc48 subfamily) LPH39_03410 PF17871 AAA lid domain LPH39_03410 PF00004 ATPase family associated with various cellular activities (AAA) LPH39_03410 PF02861 Clp amino terminal domain, pathogenicity island component LPH39_03410 PF10431 C-terminal, D2-small domain, of ClpB protein LPH39_03420 PF00301 Rubredoxin LPH39_03425 PF02581 Thiamine monophosphate synthase LPH39_03440 PF00067 Cytochrome P450 LPH39_03470 PF03796 DnaB-like helicase C terminal domain LPH39_03470 PF00772 DnaB-like helicase N terminal domain LPH39_03475 PF00691 OmpA family LPH39_03475 PF05736 OprF membrane domain LPH39_03485 PF00248 Aldo/keto reductase family LPH39_03490 PF00905 Penicillin binding protein transpeptidase domain LPH39_03490 PF00912 Transglycosylase LPH39_03490 PF17092 Penicillin-binding protein OB-like domain LPH39_03495 PF11104 Type IV pilus assembly protein PilM; LPH39_03500 PF05137 Fimbrial assembly protein (PilN) LPH39_03505 PF04350 Pilus assembly protein, PilO LPH39_03510 PF04351 Pilus assembly protein, PilP LPH39_03515 PF11741 AMIN domain LPH39_03515 PF00263 Bacterial type II and III secretion system protein LPH39_03515 PF03958 Bacterial type II/III secretion system short domain LPH39_03515 PF07660 Secretin and TonB N terminus short domain LPH39_03525 PF00884 Sulfatase LPH39_03525 PF08019 Phosphoethanolamine transferase EptA/EptB LPH39_03530 PF00067 Cytochrome P450 LPH39_03535 PF00270 DEAD/DEAH box helicase LPH39_03535 PF00271 Helicase conserved C-terminal domain LPH39_03535 PF17191 RecG wedge domain LPH39_03540 PF01042 Endoribonuclease L-PSP LPH39_03545 PF13291 ACT domain LPH39_03545 PF04607 Region found in RelA / SpoT proteins LPH39_03545 PF02824 TGS domain LPH39_03555 PF01565 FAD binding domain LPH39_03555 PF02913 FAD linked oxidases, C-terminal domain LPH39_03560 PF05736 OprF membrane domain LPH39_03560 PF00691 OmpA family LPH39_03565 PF02600 Disulfide bond formation protein DsbB LPH39_03570 PF07715 TonB-dependent Receptor Plug Domain LPH39_03570 PF00593 TonB dependent receptor LPH39_03575 PF02590 Predicted SPOUT methyltransferase LPH39_03590 PF04851 Type III restriction enzyme, res subunit LPH39_03590 PF02151 UvrB/uvrC motif LPH39_03590 PF12344 Ultra-violet resistance protein B LPH39_03590 PF17757 UvrB interaction domain LPH39_03590 PF00271 Helicase conserved C-terminal domain LPH39_03605 PF00701 Dihydrodipicolinate synthetase family LPH39_03615 PF00578 AhpC/TSA family LPH39_03620 PF13638 PIN domain LPH39_03620 PF02562 PhoH-like protein LPH39_03640 PF02769 AIR synthase related protein, C-terminal domain LPH39_03640 PF00586 AIR synthase related protein, N-terminal domain LPH39_03645 PF01029 NusB family LPH39_03650 PF00885 6,7-dimethyl-8-ribityllumazine synthase LPH39_03655 PF00925 GTP cyclohydrolase II LPH39_03655 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LPH39_03660 PF00677 Lumazine binding domain LPH39_03665 PF01872 RibD C-terminal domain LPH39_03665 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LPH39_03675 PF03477 ATP cone domain LPH39_03685 PF00464 Serine hydroxymethyltransferase LPH39_03690 PF12848 ABC transporter LPH39_03690 PF00005 ABC transporter LPH39_03695 PF06039 Malate:quinone oxidoreductase (Mqo) LPH39_03700 PF04134 Protein of unknown function, DUF393 LPH39_03705 PF02578 Multi-copper polyphenol oxidoreductase laccase LPH39_03710 PF01479 S4 domain LPH39_03710 PF00849 RNA pseudouridylate synthase LPH39_03715 PF13525 Outer membrane lipoprotein LPH39_03725 PF07670 Nucleoside recognition LPH39_03725 PF02421 Ferrous iron transport protein B LPH39_03725 PF07664 Ferrous iron transport protein B C terminus LPH39_03740 PF04386 Stringent starvation protein B LPH39_03745 PF02798 Glutathione S-transferase, N-terminal domain LPH39_03745 PF00043 Glutathione S-transferase, C-terminal domain LPH39_03765 PF01464 Transglycosylase SLT domain LPH39_03770 PF00919 Uncharacterized protein family UPF0004 LPH39_03770 PF01938 TRAM domain LPH39_03770 PF04055 Radical SAM superfamily LPH39_03775 PF02562 PhoH-like protein LPH39_03780 PF02130 Uncharacterized protein family UPF0054 LPH39_03790 PF03471 Transporter associated domain LPH39_03790 PF00571 CBS domain LPH39_03820 PF13332 Hemagglutinin repeat LPH39_03820 PF05860 haemagglutination activity domain LPH39_03820 PF04829 Pre-toxin domain with VENN motif LPH39_03825 PF04829 Pre-toxin domain with VENN motif LPH39_03825 PF13018 Extended Signal Peptide of Type V secretion system LPH39_03825 PF13332 Hemagglutinin repeat LPH39_03825 PF05860 haemagglutination activity domain LPH39_03830 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB LPH39_03830 PF08479 POTRA domain, ShlB-type LPH39_03830 PF17287 POTRA domain LPH39_03840 PF00521 DNA gyrase/topoisomerase IV, subunit A LPH39_03840 PF03989 DNA gyrase C-terminal domain, beta-propeller LPH39_03845 PF01008 Initiation factor 2 subunit family LPH39_03855 PF00152 tRNA synthetases class II (D, K and N) LPH39_03860 PF00583 Acetyltransferase (GNAT) family LPH39_03865 PF00533 BRCA1 C Terminus (BRCT) domain LPH39_03865 PF01653 NAD-dependent DNA ligase adenylation domain LPH39_03865 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LPH39_03865 PF12826 Helix-hairpin-helix motif LPH39_03865 PF03120 NAD-dependent DNA ligase OB-fold domain LPH39_03875 PF04354 ZipA, C-terminal FtsZ-binding domain LPH39_03880 PF02463 RecF/RecN/SMC N terminal domain LPH39_03885 PF01281 Ribosomal protein L9, N-terminal domain LPH39_03885 PF03948 Ribosomal protein L9, C-terminal domain LPH39_03890 PF01084 Ribosomal protein S18 LPH39_03895 PF01250 Ribosomal protein S6 LPH39_03900 PF01521 Iron-sulphur cluster biosynthesis LPH39_03905 PF00152 tRNA synthetases class II (D, K and N) LPH39_03905 PF01336 OB-fold nucleic acid binding domain LPH39_03910 PF01061 ABC-2 type transporter LPH39_03915 PF00005 ABC transporter LPH39_03925 PF01180 Dihydroorotate dehydrogenase LPH39_03930 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LPH39_03930 PF01565 FAD binding domain LPH39_03935 PF00892 EamA-like transporter family LPH39_03940 PF01569 PAP2 superfamily LPH39_03945 PF04551 GcpE protein LPH39_03955 PF00072 Response regulator receiver domain LPH39_03960 PF00889 Elongation factor TS LPH39_03965 PF00318 Ribosomal protein S2 LPH39_03980 PF00664 ABC transporter transmembrane region LPH39_03980 PF00005 ABC transporter LPH39_04000 PF02321 Outer membrane efflux protein LPH39_04005 PF12850 Calcineurin-like phosphoesterase superfamily domain LPH39_04010 PF02541 Ppx/GppA phosphatase family LPH39_04015 PF02503 Polyphosphate kinase middle domain LPH39_04015 PF13090 Polyphosphate kinase C-terminal domain 2 LPH39_04015 PF17941 Polyphosphate kinase C-terminal domain 1 LPH39_04015 PF13089 Polyphosphate kinase N-terminal domain LPH39_04020 PF00512 His Kinase A (phospho-acceptor) domain LPH39_04020 PF00989 PAS fold LPH39_04020 PF11808 Phosphate regulon sensor protein PhoR LPH39_04020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH39_04025 PF00486 Transcriptional regulatory protein, C terminal LPH39_04025 PF00072 Response regulator receiver domain LPH39_04030 PF01435 Peptidase family M48 LPH39_04030 PF13181 Tetratricopeptide repeat LPH39_04035 PF00462 Glutaredoxin LPH39_04040 PF00180 Isocitrate/isopropylmalate dehydrogenase LPH39_04050 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LPH39_04050 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LPH39_04060 PF00037 4Fe-4S binding domain LPH39_04060 PF11953 Domain of unknown function (DUF3470) LPH39_04070 PF01106 NifU-like domain LPH39_04075 PF01329 Pterin 4 alpha carbinolamine dehydratase LPH39_04090 PF01479 S4 domain LPH39_04090 PF00849 RNA pseudouridylate synthase LPH39_04095 PF12111 Polyribonucleotide phosphorylase C terminal LPH39_04095 PF00575 S1 RNA binding domain LPH39_04095 PF10150 Ribonuclease E/G family LPH39_04100 PF00196 Bacterial regulatory proteins, luxR family LPH39_04100 PF00072 Response regulator receiver domain LPH39_04105 PF17773 UPF0176 acylphosphatase like domain LPH39_04115 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LPH39_04115 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LPH39_04120 PF00545 ribonuclease LPH39_04130 PF00005 ABC transporter LPH39_04130 PF16326 ABC transporter C-terminal domain LPH39_04130 PF12848 ABC transporter LPH39_04135 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LPH39_04140 PF00313 'Cold-shock' DNA-binding domain LPH39_04150 PF01435 Peptidase family M48 LPH39_04155 PF03144 Elongation factor Tu domain 2 LPH39_04155 PF03143 Elongation factor Tu C-terminal domain LPH39_04155 PF00009 Elongation factor Tu GTP binding domain LPH39_04160 PF00679 Elongation factor G C-terminus LPH39_04160 PF14492 Elongation Factor G, domain II LPH39_04160 PF00009 Elongation factor Tu GTP binding domain LPH39_04160 PF03144 Elongation factor Tu domain 2 LPH39_04160 PF03764 Elongation factor G, domain IV LPH39_04165 PF00177 Ribosomal protein S7p/S5e LPH39_04170 PF00164 Ribosomal protein S12/S23 LPH39_04175 PF04998 RNA polymerase Rpb1, domain 5 LPH39_04175 PF05000 RNA polymerase Rpb1, domain 4 LPH39_04175 PF04983 RNA polymerase Rpb1, domain 3 LPH39_04175 PF00623 RNA polymerase Rpb1, domain 2 LPH39_04175 PF04997 RNA polymerase Rpb1, domain 1 LPH39_04180 PF04563 RNA polymerase beta subunit LPH39_04180 PF04560 RNA polymerase Rpb2, domain 7 LPH39_04180 PF00562 RNA polymerase Rpb2, domain 6 LPH39_04180 PF10385 RNA polymerase beta subunit external 1 domain LPH39_04180 PF04565 RNA polymerase Rpb2, domain 3 LPH39_04180 PF04561 RNA polymerase Rpb2, domain 2 LPH39_04185 PF16320 Ribosomal protein L7/L12 dimerisation domain LPH39_04185 PF00542 Ribosomal protein L7/L12 C-terminal domain LPH39_04190 PF00466 Ribosomal protein L10 LPH39_04195 PF00687 Ribosomal protein L1p/L10e family LPH39_04200 PF00298 Ribosomal protein L11, RNA binding domain LPH39_04200 PF03946 Ribosomal protein L11, N-terminal domain LPH39_04205 PF00467 KOW motif LPH39_04205 PF02357 Transcription termination factor nusG LPH39_04210 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LPH39_04220 PF03143 Elongation factor Tu C-terminal domain LPH39_04220 PF03144 Elongation factor Tu domain 2 LPH39_04220 PF00009 Elongation factor Tu GTP binding domain LPH39_04240 PF01926 50S ribosome-binding GTPase LPH39_04240 PF06071 Protein of unknown function (DUF933) LPH39_04245 PF01195 Peptidyl-tRNA hydrolase LPH39_04250 PF01386 Ribosomal L25p family LPH39_04250 PF14693 Ribosomal protein TL5, C-terminal domain LPH39_04255 PF14572 Phosphoribosyl synthetase-associated domain LPH39_04255 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LPH39_04265 PF08544 GHMP kinases C terminal LPH39_04265 PF00288 GHMP kinases N terminal domain LPH39_04270 PF03550 Outer membrane lipoprotein LolB LPH39_04280 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LPH39_04280 PF01488 Shikimate / quinate 5-dehydrogenase LPH39_04280 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LPH39_04285 PF03462 PCRF domain LPH39_04285 PF00472 RF-1 domain LPH39_04295 PF01170 Putative RNA methylase family UPF0020 LPH39_04295 PF02926 THUMP domain LPH39_04295 PF10672 S-adenosylmethionine-dependent methyltransferase LPH39_04355 PF00497 Bacterial extracellular solute-binding proteins, family 3 LPH39_04360 PF00528 Binding-protein-dependent transport system inner membrane component LPH39_04365 PF00005 ABC transporter LPH39_04370 PF00528 Binding-protein-dependent transport system inner membrane component LPH39_04375 PF13361 UvrD-like helicase C-terminal domain LPH39_04375 PF00580 UvrD/REP helicase N-terminal domain LPH39_04375 PF12705 PD-(D/E)XK nuclease superfamily LPH39_04385 PF01914 MarC family integral membrane protein LPH39_04390 PF00462 Glutaredoxin LPH39_04395 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LPH39_04395 PF02222 ATP-grasp domain LPH39_04400 PF00731 AIR carboxylase LPH39_04420 PF07731 Multicopper oxidase LPH39_04420 PF07732 Multicopper oxidase LPH39_04430 PF00580 UvrD/REP helicase N-terminal domain LPH39_04430 PF13361 UvrD-like helicase C-terminal domain LPH39_04440 PF04349 Periplasmic glucan biosynthesis protein, MdoG LPH39_04445 PF01343 Peptidase family S49 LPH39_04450 PF01554 MatE LPH39_04465 PF00270 DEAD/DEAH box helicase LPH39_04465 PF00271 Helicase conserved C-terminal domain LPH39_04465 PF17764 3′ DNA-binding domain (3′BD) LPH39_04465 PF18074 Primosomal protein N C-terminal domain LPH39_04465 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LPH39_04470 PF00140 Sigma-70 factor, region 1.2 LPH39_04470 PF04542 Sigma-70 region 2 LPH39_04470 PF04545 Sigma-70, region 4 LPH39_04475 PF03167 Uracil DNA glycosylase superfamily LPH39_04480 PF00072 Response regulator receiver domain LPH39_04480 PF01339 CheB methylesterase LPH39_04485 PF18075 FtsX extracellular domain LPH39_04490 PF00005 ABC transporter LPH39_04495 PF00270 DEAD/DEAH box helicase LPH39_04495 PF00271 Helicase conserved C-terminal domain LPH39_04495 PF12300 ATP-dependent RNA helicase RhlB LPH39_04500 PF00085 Thioredoxin LPH39_04505 PF07497 Rho termination factor, RNA-binding domain LPH39_04505 PF07498 Rho termination factor, N-terminal domain LPH39_04505 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LPH39_04510 PF03971 Monomeric isocitrate dehydrogenase LPH39_04515 PF09704 CRISPR-associated protein (Cas_Cas5) LPH39_04530 PF03572 Peptidase family S41 LPH39_04530 PF13180 PDZ domain LPH39_04535 PF01551 Peptidase family M23 LPH39_04545 PF00150 Cellulase (glycosyl hydrolase family 5) LPH39_04565 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LPH39_04565 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPH39_04570 PF00310 Glutamine amidotransferases class-II LPH39_04570 PF04898 Glutamate synthase central domain LPH39_04570 PF01645 Conserved region in glutamate synthase LPH39_04570 PF01493 GXGXG motif LPH39_04580 PF14748 Pyrroline-5-carboxylate reductase dimerisation LPH39_04580 PF03807 NADP oxidoreductase coenzyme F420-dependent LPH39_04665 PF13332 Hemagglutinin repeat LPH39_04665 PF05860 haemagglutination activity domain LPH39_04665 PF04829 Pre-toxin domain with VENN motif LPH39_04670 PF13018 Extended Signal Peptide of Type V secretion system LPH39_04670 PF13332 Hemagglutinin repeat LPH39_04670 PF05860 haemagglutination activity domain LPH39_04670 PF04829 Pre-toxin domain with VENN motif LPH39_04710 PF12008 Type I restriction and modification enzyme - subunit R C terminal LPH39_04710 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LPH39_04710 PF18766 SWI2/SNF2 ATPase LPH39_04715 PF01420 Type I restriction modification DNA specificity domain LPH39_04725 PF12161 HsdM N-terminal domain LPH39_04725 PF02384 N-6 DNA Methylase LPH39_04815 PF11867 Domain of unknown function (DUF3387) LPH39_04815 PF18766 SWI2/SNF2 ATPase LPH39_04815 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LPH39_04820 PF01420 Type I restriction modification DNA specificity domain LPH39_04825 PF02384 N-6 DNA Methylase LPH39_04830 PF02384 N-6 DNA Methylase LPH39_04940 PF01638 HxlR-like helix-turn-helix LPH39_04945 PF00106 short chain dehydrogenase LPH39_04965 PF00905 Penicillin binding protein transpeptidase domain LPH39_04965 PF00912 Transglycosylase LPH39_04965 PF14814 Bifunctional transglycosylase second domain LPH39_04975 PF04851 Type III restriction enzyme, res subunit LPH39_04975 PF13307 Helicase C-terminal domain LPH39_04985 PF00484 Carbonic anhydrase LPH39_04990 PF00534 Glycosyl transferases group 1 LPH39_04995 PF01522 Polysaccharide deacetylase LPH39_05005 PF00005 ABC transporter LPH39_05005 PF09383 NIL domain LPH39_05010 PF00528 Binding-protein-dependent transport system inner membrane component LPH39_05015 PF03180 NLPA lipoprotein LPH39_05030 PF02817 e3 binding domain LPH39_05030 PF00364 Biotin-requiring enzyme LPH39_05030 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LPH39_05035 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LPH39_05035 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPH39_05045 PF01545 Cation efflux family LPH39_05055 PF01053 Cys/Met metabolism PLP-dependent enzyme LPH39_05060 PF00561 alpha/beta hydrolase fold LPH39_05065 PF01551 Peptidase family M23 LPH39_05075 PF01975 Survival protein SurE LPH39_05090 PF01551 Peptidase family M23 LPH39_05090 PF01476 LysM domain LPH39_05105 PF01168 Alanine racemase, N-terminal domain LPH39_05105 PF00842 Alanine racemase, C-terminal domain LPH39_05110 PF01266 FAD dependent oxidoreductase LPH39_05120 PF01641 SelR domain LPH39_05130 PF00728 Glycosyl hydrolase family 20, catalytic domain LPH39_05130 PF02838 Glycosyl hydrolase family 20, domain 2 LPH39_05130 PF07691 PA14 domain LPH39_05140 PF07691 PA14 domain LPH39_05140 PF01915 Glycosyl hydrolase family 3 C-terminal domain LPH39_05140 PF00933 Glycosyl hydrolase family 3 N terminal domain LPH39_05140 PF14310 Fibronectin type III-like domain LPH39_05155 PF17678 Glycosyl hydrolase family 92 N-terminal domain LPH39_05155 PF07971 Glycosyl hydrolase family 92 LPH39_05160 PF01301 Glycosyl hydrolases family 35 LPH39_05165 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LPH39_05170 PF00639 PPIC-type PPIASE domain LPH39_05170 PF09312 SurA N-terminal domain LPH39_05175 PF04453 LPS transport system D LPH39_05185 PF01494 FAD binding domain LPH39_05190 PF01494 FAD binding domain LPH39_05195 PF06719 AraC-type transcriptional regulator N-terminus LPH39_05195 PF12833 Helix-turn-helix domain LPH39_05200 PF02525 Flavodoxin-like fold LPH39_05210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH39_05210 PF03466 LysR substrate binding domain LPH39_05215 PF10414 Sirohaem synthase dimerisation region LPH39_05215 PF14824 Sirohaem biosynthesis protein central LPH39_05215 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LPH39_05220 PF00291 Pyridoxal-phosphate dependent enzyme LPH39_05230 PF00274 Fructose-bisphosphate aldolase class-I LPH39_05245 PF02887 Pyruvate kinase, alpha/beta domain LPH39_05245 PF00224 Pyruvate kinase, barrel domain LPH39_05250 PF00162 Phosphoglycerate kinase LPH39_05265 PF00749 tRNA synthetases class I (E and Q), catalytic domain LPH39_05270 PF01475 Ferric uptake regulator family LPH39_05285 PF00553 Cellulose binding domain LPH39_05285 PF00150 Cellulase (glycosyl hydrolase family 5) LPH39_05295 PF00675 Insulinase (Peptidase family M16) LPH39_05295 PF05193 Peptidase M16 inactive domain LPH39_05310 PF03330 Lytic transglycolase LPH39_05315 PF07516 SecA Wing and Scaffold domain LPH39_05315 PF01043 SecA preprotein cross-linking domain LPH39_05315 PF07517 SecA DEAD-like domain LPH39_05315 PF02810 SEC-C motif LPH39_05320 PF01551 Peptidase family M23 LPH39_05320 PF08525 Opacity-associated protein A N-terminal motif LPH39_05320 PF01476 LysM domain LPH39_05330 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LPH39_05335 PF00091 Tubulin/FtsZ family, GTPase domain LPH39_05335 PF12327 FtsZ family, C-terminal domain LPH39_05340 PF02491 SHS2 domain inserted in FTSA LPH39_05345 PF03799 Cell division protein FtsQ LPH39_05345 PF08478 POTRA domain, FtsQ-type LPH39_05350 PF07478 D-ala D-ala ligase C-terminus LPH39_05355 PF01225 Mur ligase family, catalytic domain LPH39_05355 PF02875 Mur ligase family, glutamate ligase domain LPH39_05355 PF08245 Mur ligase middle domain LPH39_05360 PF04101 Glycosyltransferase family 28 C-terminal domain LPH39_05360 PF03033 Glycosyltransferase family 28 N-terminal domain LPH39_05365 PF01098 Cell cycle protein LPH39_05370 PF00953 Glycosyl transferase family 4 LPH39_05375 PF08245 Mur ligase middle domain LPH39_05375 PF02875 Mur ligase family, glutamate ligase domain LPH39_05375 PF01225 Mur ligase family, catalytic domain LPH39_05380 PF01225 Mur ligase family, catalytic domain LPH39_05380 PF08245 Mur ligase middle domain LPH39_05380 PF02875 Mur ligase family, glutamate ligase domain LPH39_05385 PF03717 Penicillin-binding Protein dimerisation domain LPH39_05385 PF00905 Penicillin binding protein transpeptidase domain LPH39_05390 PF04999 Cell division protein FtsL LPH39_05395 PF01795 MraW methylase family LPH39_05400 PF02381 MraZ protein, putative antitoxin-like LPH39_05405 PF02080 TrkA-C domain LPH39_05405 PF03600 Citrate transporter LPH39_05410 PF02390 Putative methyltransferase LPH39_05415 PF05690 Thiazole biosynthesis protein ThiG LPH39_05425 PF03797 Autotransporter beta-domain LPH39_05425 PF00657 GDSL-like Lipase/Acylhydrolase LPH39_05455 PF07977 FabA-like domain LPH39_05480 PF00692 dUTPase LPH39_05490 PF01119 DNA mismatch repair protein, C-terminal domain LPH39_05490 PF08676 MutL C terminal dimerisation domain LPH39_05495 PF01520 N-acetylmuramoyl-L-alanine amidase LPH39_05495 PF11741 AMIN domain LPH39_05500 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LPH39_05505 PF03853 YjeF-related protein N-terminus LPH39_05505 PF01256 Carbohydrate kinase LPH39_05510 PF13742 OB-fold nucleic acid binding domain LPH39_05510 PF02601 Exonuclease VII, large subunit LPH39_05525 PF01612 3'-5' exonuclease LPH39_05525 PF00570 HRDC domain LPH39_05555 PF00216 Bacterial DNA-binding protein LPH39_05560 PF03147 Ferredoxin-fold anticodon binding domain LPH39_05560 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LPH39_05560 PF01588 Putative tRNA binding domain LPH39_05560 PF03484 tRNA synthetase B5 domain LPH39_05560 PF03483 B3/4 domain LPH39_05565 PF01409 tRNA synthetases class II core domain (F) LPH39_05565 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LPH39_05570 PF00453 Ribosomal protein L20 LPH39_05575 PF01632 Ribosomal protein L35 LPH39_05580 PF00707 Translation initiation factor IF-3, C-terminal domain LPH39_05580 PF05198 Translation initiation factor IF-3, N-terminal domain LPH39_05585 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LPH39_05585 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LPH39_05585 PF02824 TGS domain LPH39_05585 PF03129 Anticodon binding domain LPH39_05595 PF18030 RimK PreATP-grasp domain LPH39_05595 PF08443 RimK-like ATP-grasp domain LPH39_05600 PF00486 Transcriptional regulatory protein, C terminal LPH39_05600 PF00072 Response regulator receiver domain LPH39_05605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH39_05605 PF00512 His Kinase A (phospho-acceptor) domain LPH39_05605 PF00989 PAS fold LPH39_05605 PF11808 Phosphate regulon sensor protein PhoR LPH39_05610 PF01121 Dephospho-CoA kinase LPH39_05615 PF06750 Bacterial Peptidase A24 N-terminal domain LPH39_05615 PF01478 Type IV leader peptidase family LPH39_05620 PF00482 Type II secretion system (T2SS), protein F LPH39_05625 PF00114 Pilin (bacterial filament) LPH39_05625 PF07963 Prokaryotic N-terminal methylation motif LPH39_05635 PF07963 Prokaryotic N-terminal methylation motif LPH39_05635 PF00114 Pilin (bacterial filament) LPH39_05640 PF00114 Pilin (bacterial filament) LPH39_05640 PF07963 Prokaryotic N-terminal methylation motif LPH39_05650 PF00437 Type II/IV secretion system protein LPH39_05650 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LPH39_05655 PF02954 Bacterial regulatory protein, Fis family LPH39_05655 PF00072 Response regulator receiver domain LPH39_05655 PF00158 Sigma-54 interaction domain LPH39_05660 PF00512 His Kinase A (phospho-acceptor) domain LPH39_05660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH39_05665 PF00549 CoA-ligase LPH39_05665 PF08442 ATP-grasp domain LPH39_05670 PF00549 CoA-ligase LPH39_05670 PF02629 CoA binding domain LPH39_05675 PF01926 50S ribosome-binding GTPase LPH39_05675 PF12631 MnmE helical domain LPH39_05675 PF10396 GTP-binding protein TrmE N-terminus LPH39_05685 PF02096 60Kd inner membrane protein LPH39_05685 PF14849 YidC periplasmic domain LPH39_05690 PF00825 Ribonuclease P LPH39_05695 PF00468 Ribosomal protein L34 LPH39_05700 PF00308 Bacterial dnaA protein LPH39_05700 PF08299 Bacterial dnaA protein helix-turn-helix LPH39_05700 PF11638 DnaA N-terminal domain LPH39_05705 PF02767 DNA polymerase III beta subunit, central domain LPH39_05705 PF00712 DNA polymerase III beta subunit, N-terminal domain LPH39_05705 PF02768 DNA polymerase III beta subunit, C-terminal domain LPH39_05710 PF02463 RecF/RecN/SMC N terminal domain LPH39_05715 PF00204 DNA gyrase B LPH39_05715 PF00986 DNA gyrase B subunit, carboxyl terminus LPH39_05715 PF18053 DNA gyrase B subunit insert domain LPH39_05715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH39_05715 PF01751 Toprim domain LPH39_05725 PF01435 Peptidase family M48 LPH39_05735 PF03544 Gram-negative bacterial TonB protein C-terminal LPH39_05740 PF01618 MotA/TolQ/ExbB proton channel family LPH39_05745 PF02472 Biopolymer transport protein ExbD/TolR LPH39_05750 PF02472 Biopolymer transport protein ExbD/TolR LPH39_05770 PF01218 Coproporphyrinogen III oxidase LPH39_05795 PF00793 DAHP synthetase I family LPH39_05800 PF07963 Prokaryotic N-terminal methylation motif LPH39_05800 PF00114 Pilin (bacterial filament) LPH39_05820 PF05567 Neisseria PilC beta-propeller domain LPH39_05825 PF00114 Pilin (bacterial filament) LPH39_05825 PF07963 Prokaryotic N-terminal methylation motif LPH39_05830 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LPH39_05835 PF00155 Aminotransferase class I and II LPH39_05840 PF01741 Large-conductance mechanosensitive channel, MscL LPH39_05865 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ LPH39_05875 PF17757 UvrB interaction domain LPH39_05875 PF03461 TRCF domain LPH39_05875 PF00271 Helicase conserved C-terminal domain LPH39_05875 PF00270 DEAD/DEAH box helicase LPH39_05875 PF02559 CarD-like/TRCF domain LPH39_05880 PF01220 Dehydroquinase class II LPH39_05885 PF00364 Biotin-requiring enzyme LPH39_05890 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LPH39_05890 PF00289 Biotin carboxylase, N-terminal domain LPH39_05890 PF02785 Biotin carboxylase C-terminal domain LPH39_05895 PF13361 UvrD-like helicase C-terminal domain LPH39_05895 PF00580 UvrD/REP helicase N-terminal domain LPH39_05905 PF00970 Oxidoreductase FAD-binding domain LPH39_05905 PF00175 Oxidoreductase NAD-binding domain LPH39_05905 PF00042 Globin LPH39_05915 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ LPH39_05920 PF08535 KorB domain LPH39_05920 PF06613 KorB C-terminal beta-barrel domain LPH39_05920 PF02195 ParB-like nuclease domain LPH39_05935 PF06968 Biotin and Thiamin Synthesis associated domain LPH39_05935 PF04055 Radical SAM superfamily LPH39_05940 PF01734 Patatin-like phospholipase LPH39_05945 PF01040 UbiA prenyltransferase family LPH39_05965 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family LPH39_06000 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LPH39_06000 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LPH39_06010 PF02881 SRP54-type protein, helical bundle domain LPH39_06010 PF02978 Signal peptide binding domain LPH39_06010 PF00448 SRP54-type protein, GTPase domain LPH39_06030 PF00577 Outer membrane usher protein LPH39_06030 PF13954 PapC N-terminal domain LPH39_06030 PF13953 PapC C-terminal domain LPH39_06035 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LPH39_06035 PF02753 Pili assembly chaperone PapD, C-terminal domain LPH39_06040 PF16970 Type-1 fimbrial protein, A LPH39_06045 PF02464 Competence-damaged protein LPH39_06050 PF00083 Sugar (and other) transporter LPH39_06055 PF01926 50S ribosome-binding GTPase LPH39_06055 PF13167 GTP-binding GTPase N-terminal LPH39_06055 PF16360 GTP-binding GTPase Middle Region LPH39_06060 PF17209 Hfq protein LPH39_06070 PF00809 Pterin binding enzyme LPH39_06075 PF00004 ATPase family associated with various cellular activities (AAA) LPH39_06075 PF06480 FtsH Extracellular LPH39_06075 PF01434 Peptidase family M41 LPH39_06075 PF17862 AAA+ lid domain LPH39_06080 PF01728 FtsJ-like methyltransferase LPH39_06085 PF01985 CRS1 / YhbY (CRM) domain LPH39_06100 PF00920 Dehydratase family LPH39_06130 PF03279 Bacterial lipid A biosynthesis acyltransferase LPH39_06135 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) LPH39_06150 PF00886 Ribosomal protein S16 LPH39_06155 PF01782 RimM N-terminal domain LPH39_06155 PF05239 PRC-barrel domain LPH39_06160 PF01746 tRNA (Guanine-1)-methyltransferase LPH39_06165 PF01245 Ribosomal protein L19 LPH39_06170 PF00557 Metallopeptidase family M24 LPH39_06180 PF14602 Hexapeptide repeat of succinyl-transferase LPH39_06180 PF00132 Bacterial transferase hexapeptide (six repeats) LPH39_06180 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal LPH39_06185 PF03960 ArsC family LPH39_06190 PF01546 Peptidase family M20/M25/M40 LPH39_06190 PF07687 Peptidase dimerisation domain LPH39_06195 PF13537 Glutamine amidotransferase domain LPH39_06195 PF00733 Asparagine synthase LPH39_06205 PF03060 Nitronate monooxygenase LPH39_06215 PF00717 Peptidase S24-like LPH39_06215 PF01726 LexA DNA binding domain LPH39_06220 PF00154 recA bacterial DNA recombination protein LPH39_06225 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LPH39_06225 PF01411 tRNA synthetases class II (A) LPH39_06225 PF02272 DHHA1 domain LPH39_06230 PF02599 Global regulator protein family LPH39_06240 PF01432 Peptidase family M3 LPH39_06255 PF07731 Multicopper oxidase LPH39_06255 PF07732 Multicopper oxidase LPH39_06255 PF00394 Multicopper oxidase LPH39_06260 PF05275 Copper resistance protein B precursor (CopB) LPH39_06265 PF08264 Anticodon-binding domain of tRNA LPH39_06265 PF00133 tRNA synthetases class I (I, L, M and V) LPH39_06265 PF10458 Valyl tRNA synthetase tRNA binding arm LPH39_06285 PF00883 Cytosol aminopeptidase family, catalytic domain LPH39_06285 PF02789 Cytosol aminopeptidase family, N-terminal domain LPH39_06305 PF01380 SIS domain LPH39_06320 PF17284 Spermidine synthase tetramerisation domain LPH39_06325 PF17810 Arginine decarboxylase helical bundle domain LPH39_06325 PF17944 Arginine decarboxylase C-terminal helical extension LPH39_06325 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LPH39_06330 PF00106 short chain dehydrogenase LPH39_06340 PF03485 Arginyl tRNA synthetase N terminal domain LPH39_06340 PF00750 tRNA synthetases class I (R) LPH39_06340 PF05746 DALR anticodon binding domain LPH39_06345 PF04002 RadC-like JAB domain LPH39_06350 PF04127 DNA / pantothenate metabolism flavoprotein LPH39_06350 PF02441 Flavoprotein LPH39_06355 PF00692 dUTPase LPH39_06360 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LPH39_06360 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LPH39_06360 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LPH39_06360 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LPH39_06370 PF00156 Phosphoribosyl transferase domain LPH39_06425 PF07690 Major Facilitator Superfamily LPH39_06430 PF03702 Anhydro-N-acetylmuramic acid kinase LPH39_06435 PF04225 Opacity-associated protein A LysM-like domain LPH39_06435 PF01551 Peptidase family M23 LPH39_06440 PF00579 tRNA synthetases class I (W and Y) LPH39_06470 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LPH39_06470 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LPH39_06500 PF16658 Class II release factor RF3, C-terminal domain LPH39_06500 PF00009 Elongation factor Tu GTP binding domain LPH39_06505 PF03006 Haemolysin-III related LPH39_06510 PF00535 Glycosyl transferase family 2 LPH39_06515 PF01026 TatD related DNase LPH39_06530 PF01597 Glycine cleavage H-protein LPH39_06535 PF08669 Glycine cleavage T-protein C-terminal barrel domain LPH39_06535 PF01571 Aminomethyltransferase folate-binding domain LPH39_06545 PF16200 C-terminal region of band_7 LPH39_06545 PF01145 SPFH domain / Band 7 family LPH39_06550 PF03819 MazG nucleotide pyrophosphohydrolase domain LPH39_06555 PF00459 Inositol monophosphatase family LPH39_06560 PF00293 NUDIX domain LPH39_06565 PF00202 Aminotransferase class-III LPH39_06570 PF04452 RNA methyltransferase LPH39_06580 PF00271 Helicase conserved C-terminal domain LPH39_06580 PF00270 DEAD/DEAH box helicase LPH39_06585 PF01242 6-pyruvoyl tetrahydropterin synthase LPH39_06610 PF03653 Uncharacterised protein family (UPF0093) LPH39_06615 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LPH39_06620 PF14579 Helix-hairpin-helix motif LPH39_06620 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LPH39_06620 PF07733 Bacterial DNA polymerase III alpha NTPase domain LPH39_06620 PF01336 OB-fold nucleic acid binding domain LPH39_06620 PF02811 PHP domain LPH39_06625 PF01259 SAICAR synthetase LPH39_06630 PF05099 Tellurite resistance protein TerB LPH39_06630 PF00226 DnaJ domain LPH39_06635 PF00834 Ribulose-phosphate 3 epimerase family LPH39_06645 PF00425 chorismate binding enzyme LPH39_06645 PF04715 Anthranilate synthase component I, N terminal region LPH39_06650 PF00117 Glutamine amidotransferase class-I LPH39_06655 PF00591 Glycosyl transferase family, a/b domain LPH39_06655 PF02885 Glycosyl transferase family, helical bundle domain LPH39_06660 PF00218 Indole-3-glycerol phosphate synthase LPH39_06675 PF12849 PBP superfamily domain LPH39_06695 PF01321 Creatinase/Prolidase N-terminal domain LPH39_06695 PF00557 Metallopeptidase family M24 LPH39_06710 PF01702 Queuine tRNA-ribosyltransferase LPH39_06715 PF02699 Preprotein translocase subunit LPH39_06720 PF07549 SecD/SecF GG Motif LPH39_06720 PF13721 SecD export protein N-terminal TM region LPH39_06720 PF02355 Protein export membrane protein LPH39_06725 PF07549 SecD/SecF GG Motif LPH39_06725 PF02355 Protein export membrane protein LPH39_06735 PF01743 Poly A polymerase head domain LPH39_06735 PF12626 Polymerase A arginine-rich C-terminus LPH39_06735 PF12627 Probable RNA and SrmB- binding site of polymerase A LPH39_06740 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LPH39_06745 PF02548 Ketopantoate hydroxymethyltransferase LPH39_06750 PF02569 Pantoate-beta-alanine ligase LPH39_06755 PF02261 Aspartate decarboxylase LPH39_06760 PF00342 Phosphoglucose isomerase LPH39_06770 PF17384 RimP C-terminal SH3 domain LPH39_06770 PF02576 RimP N-terminal domain LPH39_06775 PF00575 S1 RNA binding domain LPH39_06775 PF13184 NusA-like KH domain LPH39_06775 PF08529 NusA N-terminal domain LPH39_06780 PF00009 Elongation factor Tu GTP binding domain LPH39_06780 PF11987 Translation-initiation factor 2 LPH39_06780 PF08364 Bacterial translation initiation factor IF-2 associated region LPH39_06780 PF04760 Translation initiation factor IF-2, N-terminal region LPH39_06785 PF02033 Ribosome-binding factor A LPH39_06790 PF16198 tRNA pseudouridylate synthase B C-terminal domain LPH39_06790 PF01509 TruB family pseudouridylate synthase (N terminal domain) LPH39_06790 PF09157 Pseudouridine synthase II TruB, C-terminal LPH39_06795 PF00312 Ribosomal protein S15 LPH39_06800 PF00013 KH domain LPH39_06800 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LPH39_06800 PF01138 3' exoribonuclease family, domain 1 LPH39_06800 PF03725 3' exoribonuclease family, domain 2 LPH39_06800 PF00575 S1 RNA binding domain LPH39_06805 PF01638 HxlR-like helix-turn-helix LPH39_06810 PF05368 NmrA-like family LPH39_06815 PF00873 AcrB/AcrD/AcrF family LPH39_06825 PF00999 Sodium/hydrogen exchanger family LPH39_06845 PF00271 Helicase conserved C-terminal domain LPH39_06845 PF00270 DEAD/DEAH box helicase LPH39_06845 PF03880 DbpA RNA binding domain LPH39_06850 PF00766 Electron transfer flavoprotein FAD-binding domain LPH39_06850 PF01012 Electron transfer flavoprotein domain LPH39_06855 PF01012 Electron transfer flavoprotein domain LPH39_06860 PF16363 GDP-mannose 4,6 dehydratase LPH39_06865 PF00483 Nucleotidyl transferase LPH39_06870 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LPH39_06875 PF04321 RmlD substrate binding domain LPH39_06880 PF01050 Mannose-6-phosphate isomerase LPH39_06880 PF00483 Nucleotidyl transferase LPH39_06885 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LPH39_06885 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LPH39_06885 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LPH39_06885 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LPH39_06925 PF00082 Subtilase family LPH39_06925 PF03797 Autotransporter beta-domain LPH39_06925 PF12951 Passenger-associated-transport-repeat LPH39_06930 PF00082 Subtilase family LPH39_06930 PF12951 Passenger-associated-transport-repeat LPH39_06930 PF03797 Autotransporter beta-domain LPH39_06935 PF06779 Uncharacterised MFS-type transporter YbfB LPH39_06940 PF07669 Eco57I restriction-modification methylase LPH39_06950 PF00365 Phosphofructokinase LPH39_06960 PF08245 Mur ligase middle domain LPH39_06960 PF02875 Mur ligase family, glutamate ligase domain LPH39_06960 PF01225 Mur ligase family, catalytic domain LPH39_06965 PF01569 PAP2 superfamily LPH39_06985 PF00892 EamA-like transporter family LPH39_06990 PF02789 Cytosol aminopeptidase family, N-terminal domain LPH39_06990 PF00883 Cytosol aminopeptidase family, catalytic domain LPH39_07000 PF01594 AI-2E family transporter LPH39_07020 PF00595 PDZ domain LPH39_07025 PF01370 NAD dependent epimerase/dehydratase family LPH39_07025 PF08338 Domain of unknown function (DUF1731) LPH39_07030 PF13193 AMP-binding enzyme C-terminal domain LPH39_07030 PF00501 AMP-binding enzyme LPH39_07035 PF00694 Aconitase C-terminal domain LPH39_07035 PF00330 Aconitase family (aconitate hydratase) LPH39_07050 PF11791 Aconitate B N-terminal domain LPH39_07050 PF06434 Aconitate hydratase 2 N-terminus LPH39_07050 PF00330 Aconitase family (aconitate hydratase) LPH39_07065 PF02384 N-6 DNA Methylase LPH39_07070 PF01420 Type I restriction modification DNA specificity domain LPH39_07085 PF18766 SWI2/SNF2 ATPase LPH39_07085 PF11867 Domain of unknown function (DUF3387) LPH39_07085 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LPH39_07105 PF00121 Triosephosphate isomerase LPH39_07120 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LPH39_07125 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LPH39_07130 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LPH39_07135 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LPH39_07145 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LPH39_07145 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LPH39_07145 PF10531 SLBB domain LPH39_07150 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal LPH39_07150 PF00384 Molybdopterin oxidoreductase LPH39_07150 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LPH39_07155 PF00146 NADH dehydrogenase LPH39_07160 PF12838 4Fe-4S dicluster domain LPH39_07165 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LPH39_07170 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LPH39_07175 PF00361 Proton-conducting membrane transporter LPH39_07175 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LPH39_07180 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus LPH39_07180 PF00361 Proton-conducting membrane transporter LPH39_07185 PF00361 Proton-conducting membrane transporter LPH39_07190 PF00106 short chain dehydrogenase LPH39_07195 PF03600 Citrate transporter LPH39_07205 PF00486 Transcriptional regulatory protein, C terminal LPH39_07205 PF00072 Response regulator receiver domain LPH39_07210 PF08521 Two-component sensor kinase N-terminal LPH39_07210 PF00512 His Kinase A (phospho-acceptor) domain LPH39_07210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH39_07220 PF00196 Bacterial regulatory proteins, luxR family LPH39_07220 PF00072 Response regulator receiver domain LPH39_07225 PF00672 HAMP domain LPH39_07225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH39_07225 PF00512 His Kinase A (phospho-acceptor) domain LPH39_07225 PF00072 Response regulator receiver domain LPH39_07225 PF01627 Hpt domain LPH39_07235 PF00375 Sodium:dicarboxylate symporter family LPH39_07240 PF01515 Phosphate acetyl/butaryl transferase LPH39_07240 PF03949 Malic enzyme, NAD binding domain LPH39_07240 PF00390 Malic enzyme, N-terminal domain LPH39_07245 PF00183 Hsp90 protein LPH39_07245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH39_07255 PF01467 Cytidylyltransferase-like LPH39_07265 PF00037 4Fe-4S binding domain LPH39_07275 PF00990 Diguanylate cyclase, GGDEF domain LPH39_07280 PF01551 Peptidase family M23 LPH39_07280 PF01476 LysM domain LPH39_07285 PF01979 Amidohydrolase family LPH39_07290 PF01809 Putative membrane protein insertion efficiency factor LPH39_07295 PF01258 Prokaryotic dksA/traR C4-type zinc finger LPH39_07325 PF02657 Fe-S metabolism associated domain LPH39_07330 PF09190 DALR domain LPH39_07330 PF01406 tRNA synthetases class I (C) catalytic domain LPH39_07340 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LPH39_07340 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LPH39_07345 PF00764 Arginosuccinate synthase LPH39_07350 PF07687 Peptidase dimerisation domain LPH39_07350 PF01546 Peptidase family M20/M25/M40 LPH39_07355 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase LPH39_07355 PF00696 Amino acid kinase family LPH39_07365 PF01118 Semialdehyde dehydrogenase, NAD binding domain LPH39_07370 PF00206 Lyase LPH39_07380 PF01472 PUA domain LPH39_07380 PF00696 Amino acid kinase family LPH39_07385 PF00171 Aldehyde dehydrogenase family LPH39_07395 PF02796 Helix-turn-helix domain of resolvase LPH39_07395 PF00239 Resolvase, N terminal domain LPH39_07420 PF00239 Resolvase, N terminal domain LPH39_07420 PF02796 Helix-turn-helix domain of resolvase LPH39_07435 PF13700 Domain of unknown function (DUF4158) LPH39_07435 PF01526 Tn3 transposase DDE domain LPH39_07465 PF03524 Conjugal transfer protein LPH39_07505 PF01593 Flavin containing amine oxidoreductase LPH39_07515 PF02627 Carboxymuconolactone decarboxylase family LPH39_07535 PF03466 LysR substrate binding domain LPH39_07535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH39_07540 PF05016 ParE toxin of type II toxin-antitoxin system, parDE LPH39_07545 PF09386 Antitoxin ParD LPH39_07550 PF02796 Helix-turn-helix domain of resolvase LPH39_07550 PF00239 Resolvase, N terminal domain LPH39_07575 PF02796 Helix-turn-helix domain of resolvase LPH39_07575 PF00239 Resolvase, N terminal domain LPH39_07615 PF06594 Haemolysin-type calcium binding protein related domain LPH39_07615 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) LPH39_07620 PF14437 MafB19-like deaminase LPH39_07625 PF01325 Iron dependent repressor, N-terminal DNA binding domain LPH39_07625 PF02742 Iron dependent repressor, metal binding and dimerisation domain LPH39_07630 PF01566 Natural resistance-associated macrophage protein LPH39_07645 PF04377 Arginine-tRNA-protein transferase, C terminus LPH39_07645 PF04376 Arginine-tRNA-protein transferase, N terminus LPH39_07680 PF00082 Subtilase family LPH39_07680 PF12951 Passenger-associated-transport-repeat LPH39_07680 PF03797 Autotransporter beta-domain LPH39_07705 PF01553 Acyltransferase LPH39_07720 PF05221 S-adenosyl-L-homocysteine hydrolase LPH39_07720 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain LPH39_07735 PF01351 Ribonuclease HII LPH39_07740 PF02684 Lipid-A-disaccharide synthetase LPH39_07745 PF00132 Bacterial transferase hexapeptide (six repeats) LPH39_07745 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LPH39_07750 PF07977 FabA-like domain LPH39_07755 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LPH39_07755 PF00132 Bacterial transferase hexapeptide (six repeats) LPH39_07760 PF07244 Surface antigen variable number repeat LPH39_07760 PF01103 Surface antigen LPH39_07765 PF17820 PDZ domain LPH39_07765 PF02163 Peptidase family M50 LPH39_07770 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LPH39_07770 PF13288 DXP reductoisomerase C-terminal domain LPH39_07770 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LPH39_07780 PF01255 Putative undecaprenyl diphosphate synthase LPH39_07785 PF01765 Ribosome recycling factor LPH39_07815 PF04305 Protein of unknown function (DUF455) LPH39_07820 PF00696 Amino acid kinase family LPH39_07895 PF01081 KDPG and KHG aldolase LPH39_07900 PF00920 Dehydratase family LPH39_07905 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LPH39_07910 PF02685 Glucokinase LPH39_07915 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LPH39_07915 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LPH39_07920 PF17912 MalK OB fold domain LPH39_07920 PF00005 ABC transporter LPH39_07935 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LPH39_07940 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LPH39_07945 PF02910 Fumarate reductase flavoprotein C-term LPH39_07945 PF00890 FAD binding domain LPH39_07950 PF13085 2Fe-2S iron-sulfur cluster binding domain LPH39_07950 PF13237 4Fe-4S dicluster domain LPH39_07955 PF03937 Flavinator of succinate dehydrogenase LPH39_07965 PF12704 MacB-like periplasmic core domain LPH39_07965 PF02687 FtsX-like permease family LPH39_07970 PF00005 ABC transporter LPH39_07975 PF03772 Competence protein LPH39_07975 PF00753 Metallo-beta-lactamase superfamily LPH39_07990 PF00005 ABC transporter LPH39_07990 PF00664 ABC transporter transmembrane region LPH39_07995 PF02606 Tetraacyldisaccharide-1-P 4'-kinase LPH39_08000 PF01883 Iron-sulfur cluster assembly protein LPH39_08000 PF10609 NUBPL iron-transfer P-loop NTPase LPH39_08015 PF13091 PLD-like domain LPH39_08040 PF03358 NADPH-dependent FMN reductase LPH39_08045 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LPH39_08045 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LPH39_08060 PF01300 Telomere recombination LPH39_08065 PF01751 Toprim domain LPH39_08065 PF13368 Topoisomerase C-terminal repeat LPH39_08065 PF01131 DNA topoisomerase LPH39_08075 PF04361 Protein of unknown function (DUF494) LPH39_08080 PF17782 DprA winged helix domain LPH39_08080 PF02481 DNA recombination-mediator protein A LPH39_08090 PF01327 Polypeptide deformylase LPH39_08095 PF02911 Formyl transferase, C-terminal domain LPH39_08095 PF00551 Formyl transferase LPH39_08100 PF01189 16S rRNA methyltransferase RsmB/F LPH39_08100 PF01029 NusB family LPH39_08105 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase LPH39_08120 PF07963 Prokaryotic N-terminal methylation motif LPH39_08120 PF00114 Pilin (bacterial filament) LPH39_08240 PF01367 5'-3' exonuclease, C-terminal SAM fold LPH39_08240 PF01612 3'-5' exonuclease LPH39_08240 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LPH39_08240 PF00476 DNA polymerase family A LPH39_08245 PF05173 Dihydrodipicolinate reductase, C-terminus LPH39_08245 PF01113 Dihydrodipicolinate reductase, N-terminus LPH39_08250 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LPH39_08250 PF00117 Glutamine amidotransferase class-I LPH39_08255 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LPH39_08255 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LPH39_08255 PF02142 MGS-like domain LPH39_08260 PF01272 Transcription elongation factor, GreA/GreB, C-term LPH39_08260 PF03449 Transcription elongation factor, N-terminal LPH39_08270 PF01368 DHH family LPH39_08270 PF17768 RecJ OB domain LPH39_08270 PF02272 DHHA1 domain LPH39_08280 PF01336 OB-fold nucleic acid binding domain LPH39_08280 PF00152 tRNA synthetases class II (D, K and N) LPH39_08285 PF00072 Response regulator receiver domain LPH39_08290 PF00512 His Kinase A (phospho-acceptor) domain LPH39_08290 PF00072 Response regulator receiver domain LPH39_08290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH39_08290 PF01627 Hpt domain LPH39_08295 PF00378 Enoyl-CoA hydratase/isomerase LPH39_08300 PF00696 Amino acid kinase family LPH39_08300 PF01842 ACT domain LPH39_08310 PF08245 Mur ligase middle domain LPH39_08330 PF00293 NUDIX domain LPH39_08340 PF02219 Methylenetetrahydrofolate reductase LPH39_08350 PF02545 Maf-like protein LPH39_08355 PF10150 Ribonuclease E/G family LPH39_08355 PF00575 S1 RNA binding domain LPH39_08365 PF01523 Putative modulator of DNA gyrase LPH39_08370 PF04751 Protein of unknown function (DUF615) LPH39_08375 PF01523 Putative modulator of DNA gyrase LPH39_08385 PF06250 YhcG PDDEXK nuclease domain LPH39_08385 PF17761 DUF1016 N-terminal domain LPH39_08405 PF03466 LysR substrate binding domain LPH39_08405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH39_08410 PF03358 NADPH-dependent FMN reductase LPH39_08420 PF00107 Zinc-binding dehydrogenase LPH39_08420 PF08240 Alcohol dehydrogenase GroES-like domain LPH39_08435 PF00248 Aldo/keto reductase family LPH39_08450 PF14602 Hexapeptide repeat of succinyl-transferase LPH39_08450 PF00132 Bacterial transferase hexapeptide (six repeats) LPH39_08450 PF12804 MobA-like NTP transferase domain LPH39_08460 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LPH39_08460 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LPH39_08465 PF02874 ATP synthase alpha/beta family, beta-barrel domain LPH39_08465 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LPH39_08470 PF00231 ATP synthase LPH39_08475 PF00306 ATP synthase alpha/beta chain, C terminal domain LPH39_08475 PF02874 ATP synthase alpha/beta family, beta-barrel domain LPH39_08475 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LPH39_08480 PF00213 ATP synthase delta (OSCP) subunit LPH39_08485 PF00430 ATP synthase B/B' CF(0) LPH39_08490 PF00137 ATP synthase subunit C LPH39_08495 PF00119 ATP synthase A chain LPH39_08505 PF00338 Ribosomal protein S10p/S20e LPH39_08510 PF00297 Ribosomal protein L3 LPH39_08515 PF00573 Ribosomal protein L4/L1 family LPH39_08520 PF00276 Ribosomal protein L23 LPH39_08525 PF03947 Ribosomal Proteins L2, C-terminal domain LPH39_08525 PF00181 Ribosomal Proteins L2, RNA binding domain LPH39_08530 PF00203 Ribosomal protein S19 LPH39_08535 PF00237 Ribosomal protein L22p/L17e LPH39_08540 PF07650 KH domain LPH39_08540 PF00189 Ribosomal protein S3, C-terminal domain LPH39_08545 PF00252 Ribosomal protein L16p/L10e LPH39_08550 PF00831 Ribosomal L29 protein LPH39_08555 PF00366 Ribosomal protein S17 LPH39_08560 PF00238 Ribosomal protein L14p/L23e LPH39_08565 PF00467 KOW motif LPH39_08565 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LPH39_08570 PF00281 Ribosomal protein L5 LPH39_08570 PF00673 ribosomal L5P family C-terminus LPH39_08575 PF00253 Ribosomal protein S14p/S29e LPH39_08580 PF00410 Ribosomal protein S8 LPH39_08585 PF00347 Ribosomal protein L6 LPH39_08590 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LPH39_08595 PF03719 Ribosomal protein S5, C-terminal domain LPH39_08595 PF00333 Ribosomal protein S5, N-terminal domain LPH39_08600 PF00327 Ribosomal protein L30p/L7e LPH39_08605 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LPH39_08610 PF00344 SecY translocase LPH39_08615 PF00416 Ribosomal protein S13/S18 LPH39_08620 PF00411 Ribosomal protein S11 LPH39_08625 PF01479 S4 domain LPH39_08625 PF00163 Ribosomal protein S4/S9 N-terminal domain LPH39_08630 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LPH39_08630 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LPH39_08630 PF01000 RNA polymerase Rpb3/RpoA insert domain LPH39_08635 PF01196 Ribosomal protein L17 LPH39_08640 PF04380 Membrane fusogenic activity LPH39_08645 PF13335 Magnesium chelatase, subunit ChlI C-terminal LPH39_08645 PF01078 Magnesium chelatase, subunit ChlI LPH39_08650 PF00561 alpha/beta hydrolase fold LPH39_08665 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LPH39_08665 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LPH39_08665 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LPH39_08680 PF05698 Bacterial trigger factor protein (TF) C-terminus LPH39_08680 PF05697 Bacterial trigger factor protein (TF) LPH39_08685 PF00574 Clp protease LPH39_08690 PF06689 ClpX C4-type zinc finger LPH39_08690 PF10431 C-terminal, D2-small domain, of ClpB protein LPH39_08690 PF07724 AAA domain (Cdc48 subfamily) LPH39_08695 PF05362 Lon protease (S16) C-terminal proteolytic domain LPH39_08695 PF02190 ATP-dependent protease La (LON) substrate-binding domain LPH39_08695 PF00004 ATPase family associated with various cellular activities (AAA) LPH39_08700 PF00216 Bacterial DNA-binding protein LPH39_08725 PF00317 Ribonucleotide reductase, all-alpha domain LPH39_08725 PF03477 ATP cone domain LPH39_08725 PF02867 Ribonucleotide reductase, barrel domain LPH39_08730 PF00268 Ribonucleotide reductase, small chain LPH39_08760 PF01479 S4 domain LPH39_08760 PF00849 RNA pseudouridylate synthase LPH39_08765 PF13419 Haloacid dehalogenase-like hydrolase LPH39_08780 PF00830 Ribosomal L28 family LPH39_08785 PF00471 Ribosomal protein L33 LPH39_08790 PF13396 Phospholipase_D-nuclease N-terminal LPH39_08790 PF13091 PLD-like domain LPH39_08805 PF07963 Prokaryotic N-terminal methylation motif LPH39_08805 PF00114 Pilin (bacterial filament) LPH39_08825 PF01612 3'-5' exonuclease LPH39_08825 PF01367 5'-3' exonuclease, C-terminal SAM fold LPH39_08825 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LPH39_08825 PF00476 DNA polymerase family A LPH39_08845 PF00959 Phage lysozyme LPH39_08865 PF01555 DNA methylase LPH39_08885 PF02798 Glutathione S-transferase, N-terminal domain LPH39_08885 PF00043 Glutathione S-transferase, C-terminal domain LPH39_08890 PF00056 lactate/malate dehydrogenase, NAD binding domain LPH39_08890 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LPH39_08895 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LPH39_08900 PF00679 Elongation factor G C-terminus LPH39_08900 PF03144 Elongation factor Tu domain 2 LPH39_08900 PF00009 Elongation factor Tu GTP binding domain LPH39_08915 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LPH39_08915 PF00529 HlyD membrane-fusion protein of T1SS LPH39_08940 PF00664 ABC transporter transmembrane region LPH39_08940 PF03412 Peptidase C39 family LPH39_08940 PF00005 ABC transporter LPH39_08945 PF01061 ABC-2 type transporter LPH39_08950 PF00005 ABC transporter LPH39_08955 PF05567 Neisseria PilC beta-propeller domain LPH39_08970 PF08482 ATP-dependent helicase C-terminal LPH39_08970 PF00271 Helicase conserved C-terminal domain LPH39_08970 PF00270 DEAD/DEAH box helicase LPH39_08970 PF04408 Helicase associated domain (HA2) LPH39_08980 PF13185 GAF domain LPH39_08985 PF17243 POTRA domain TamA domain 1 LPH39_08985 PF01103 Surface antigen LPH39_08990 PF04357 TamB, inner membrane protein subunit of TAM complex LPH39_09005 PF00285 Citrate synthase, C-terminal domain LPH39_09010 PF00330 Aconitase family (aconitate hydratase) LPH39_09010 PF00694 Aconitase C-terminal domain LPH39_09015 PF04303 PrpF protein LPH39_09035 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain LPH39_09035 PF00207 Alpha-2-macroglobulin family LPH39_09035 PF11974 Bacterial alpha-2-macroglobulin MG3 domain LPH39_09035 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain LPH39_09035 PF17962 Bacterial macroglobulin domain 6 LPH39_09035 PF01835 MG2 domain LPH39_09035 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain LPH39_09035 PF07703 Alpha-2-macroglobulin bait region domain LPH39_09040 PF02583 Metal-sensitive transcriptional repressor LPH39_09045 PF03824 High-affinity nickel-transport protein LPH39_09050 PF07859 alpha/beta hydrolase fold LPH39_09055 PF12833 Helix-turn-helix domain LPH39_09055 PF12852 Cupin LPH39_09070 PF01447 Thermolysin metallopeptidase, catalytic domain LPH39_09070 PF02868 Thermolysin metallopeptidase, alpha-helical domain LPH39_09070 PF16485 Protealysin propeptide LPH39_09075 PF00929 Exonuclease LPH39_09080 PF00924 Mechanosensitive ion channel LPH39_09080 PF05552 Conserved TM helix LPH39_09085 PF00391 PEP-utilising enzyme, mobile domain LPH39_09085 PF02896 PEP-utilising enzyme, TIM barrel domain LPH39_09085 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LPH39_09090 PF03618 Kinase/pyrophosphorylase LPH39_09110 PF04286 Protein of unknown function (DUF445) LPH39_09125 PF04359 Protein of unknown function (DUF493) LPH39_09130 PF03099 Biotin/lipoate A/B protein ligase family LPH39_09135 PF04055 Radical SAM superfamily LPH39_09135 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family LPH39_09165 PF03471 Transporter associated domain LPH39_09165 PF00571 CBS domain LPH39_09165 PF01595 Cyclin M transmembrane N-terminal domain LPH39_09180 PF01751 Toprim domain LPH39_09180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH39_09180 PF00986 DNA gyrase B subunit, carboxyl terminus LPH39_09180 PF00204 DNA gyrase B LPH39_09190 PF00117 Glutamine amidotransferase class-I LPH39_09190 PF06418 CTP synthase N-terminus LPH39_09195 PF00793 DAHP synthetase I family LPH39_09200 PF00113 Enolase, C-terminal TIM barrel domain LPH39_09200 PF03952 Enolase, N-terminal domain LPH39_09205 PF04977 Septum formation initiator LPH39_09210 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LPH39_09215 PF02542 YgbB family LPH39_09220 PF01713 Smr domain LPH39_09245 PF02470 MlaD protein LPH39_09245 PF03886 ABC-type transport auxiliary lipoprotein component LPH39_09250 PF00005 ABC transporter LPH39_09255 PF02405 Permease MlaE LPH39_09325 PF04093 rod shape-determining protein MreD LPH39_09330 PF03717 Penicillin-binding Protein dimerisation domain LPH39_09330 PF00905 Penicillin binding protein transpeptidase domain LPH39_09335 PF01098 Cell cycle protein LPH39_09340 PF02547 Queuosine biosynthesis protein LPH39_09345 PF02824 TGS domain LPH39_09345 PF04607 Region found in RelA / SpoT proteins LPH39_09345 PF13291 ACT domain LPH39_09360 PF03776 Septum formation topological specificity factor MinE LPH39_09365 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LPH39_09370 PF03775 Septum formation inhibitor MinC, C-terminal domain LPH39_09370 PF05209 Septum formation inhibitor MinC, N-terminal domain LPH39_09390 PF00730 HhH-GPD superfamily base excision DNA repair protein LPH39_09400 PF01292 Prokaryotic cytochrome b561 LPH39_09405 PF04264 YceI-like domain LPH39_09410 PF00072 Response regulator receiver domain LPH39_09410 PF09308 LuxQ, periplasmic LPH39_09410 PF00512 His Kinase A (phospho-acceptor) domain LPH39_09410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH39_09420 PF01208 Uroporphyrinogen decarboxylase (URO-D) LPH39_09425 PF01761 3-dehydroquinate synthase LPH39_09430 PF01202 Shikimate kinase LPH39_09435 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LPH39_09435 PF01243 Pyridoxamine 5'-phosphate oxidase LPH39_09445 PF00749 tRNA synthetases class I (E and Q), catalytic domain LPH39_09445 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain LPH39_09455 PF03932 CutC family LPH39_09475 PF00528 Binding-protein-dependent transport system inner membrane component LPH39_09480 PF00528 Binding-protein-dependent transport system inner membrane component LPH39_09485 PF12857 TOBE-like domain LPH39_09485 PF00005 ABC transporter LPH39_09525 PF01381 Helix-turn-helix LPH39_09600 PF10065 Uncharacterized conserved protein (DUF2303) LPH39_09625 PF03979 Sigma-70 factor, region 1.1 LPH39_09625 PF04545 Sigma-70, region 4 LPH39_09625 PF04539 Sigma-70 region 3 LPH39_09625 PF04542 Sigma-70 region 2 LPH39_09625 PF00140 Sigma-70 factor, region 1.2 LPH39_09625 PF04546 Sigma-70, non-essential region LPH39_09635 PF00521 DNA gyrase/topoisomerase IV, subunit A LPH39_09635 PF03989 DNA gyrase C-terminal domain, beta-propeller LPH39_09645 PF02321 Outer membrane efflux protein LPH39_09650 PF00529 HlyD membrane-fusion protein of T1SS LPH39_09650 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LPH39_09655 PF07690 Major Facilitator Superfamily LPH39_09660 PF12697 Alpha/beta hydrolase family LPH39_09665 PF00155 Aminotransferase class I and II LPH39_09675 PF01040 UbiA prenyltransferase family LPH39_09680 PF00753 Metallo-beta-lactamase superfamily LPH39_09685 PF12627 Probable RNA and SrmB- binding site of polymerase A LPH39_09685 PF01743 Poly A polymerase head domain LPH39_09685 PF01966 HD domain LPH39_09690 PF01464 Transglycosylase SLT domain LPH39_09690 PF14718 Soluble lytic murein transglycosylase L domain LPH39_09700 PF02666 Phosphatidylserine decarboxylase LPH39_09755 PF17831 Pyruvate dehydrogenase E1 component middle domain LPH39_09755 PF00456 Transketolase, thiamine diphosphate binding domain LPH39_09760 PF00698 Acyl transferase domain LPH39_09770 PF00550 Phosphopantetheine attachment site LPH39_09775 PF02801 Beta-ketoacyl synthase, C-terminal domain LPH39_09775 PF00109 Beta-ketoacyl synthase, N-terminal domain LPH39_09780 PF00425 chorismate binding enzyme LPH39_09780 PF04715 Anthranilate synthase component I, N terminal region LPH39_09785 PF02618 YceG-like family LPH39_09790 PF09115 DNA polymerase III, delta subunit, C terminal LPH39_09810 PF00459 Inositol monophosphatase family LPH39_09815 PF00588 SpoU rRNA Methylase family LPH39_09820 PF04055 Radical SAM superfamily LPH39_09825 PF09285 Elongation factor P, C-terminal LPH39_09825 PF08207 Elongation factor P (EF-P) KOW-like domain LPH39_09825 PF01132 Elongation factor P (EF-P) OB domain LPH39_09830 PF01979 Amidohydrolase family LPH39_09840 PF13419 Haloacid dehalogenase-like hydrolase LPH39_09855 PF00561 alpha/beta hydrolase fold LPH39_09860 PF08534 Redoxin LPH39_09890 PF00155 Aminotransferase class I and II LPH39_09895 PF00795 Carbon-nitrogen hydrolase LPH39_09905 PF00849 RNA pseudouridylate synthase LPH39_09905 PF01479 S4 domain LPH39_09910 PF04079 Segregation and condensation complex subunit ScpB LPH39_09915 PF02616 Segregation and condensation protein ScpA LPH39_09945 PF00528 Binding-protein-dependent transport system inner membrane component LPH39_09950 PF00528 Binding-protein-dependent transport system inner membrane component LPH39_09965 PF00795 Carbon-nitrogen hydrolase LPH39_09970 PF04371 Porphyromonas-type peptidyl-arginine deiminase LPH39_09980 PF00444 Ribosomal protein L36 LPH39_09985 PF02224 Cytidylate kinase LPH39_09990 PF00575 S1 RNA binding domain LPH39_09995 PF00216 Bacterial DNA-binding protein LPH39_10005 PF18073 Rubredoxin metal binding domain LPH39_10010 PF00953 Glycosyl transferase family 4 LPH39_10015 PF02719 Polysaccharide biosynthesis protein LPH39_10020 PF00483 Nucleotidyl transferase LPH39_10025 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LPH39_10025 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LPH39_10030 PF00571 CBS domain LPH39_10030 PF00478 IMP dehydrogenase / GMP reductase domain LPH39_10035 PF00117 Glutamine amidotransferase class-I LPH39_10035 PF00958 GMP synthase C terminal domain LPH39_10035 PF02540 NAD synthase LPH39_10085 PF09571 XcyI restriction endonuclease LPH39_10100 PF00005 ABC transporter LPH39_10100 PF17760 UvrA interaction domain LPH39_10100 PF17755 UvrA DNA-binding domain LPH39_10105 PF00829 Ribosomal prokaryotic L21 protein LPH39_10110 PF01016 Ribosomal L27 protein LPH39_10115 PF01926 50S ribosome-binding GTPase LPH39_10115 PF01018 GTP1/OBG LPH39_10120 PF01649 Ribosomal protein S20 LPH39_10125 PF03023 Lipid II flippase MurJ LPH39_10130 PF01687 Riboflavin kinase LPH39_10130 PF06574 FAD synthetase LPH39_10135 PF06827 Zinc finger found in FPG and IleRS LPH39_10135 PF08264 Anticodon-binding domain of tRNA LPH39_10135 PF00133 tRNA synthetases class I (I, L, M and V) LPH39_10140 PF01252 Signal peptidase (SPase) II LPH39_10145 PF02401 LytB protein LPH39_10215 PF13091 PLD-like domain LPH39_10215 PF13087 AAA domain LPH39_10220 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) LPH39_10220 PF06594 Haemolysin-type calcium binding protein related domain LPH39_10285 PF00664 ABC transporter transmembrane region LPH39_10285 PF00005 ABC transporter LPH39_10285 PF03412 Peptidase C39 family LPH39_10290 PF00155 Aminotransferase class I and II LPH39_10295 PF01522 Polysaccharide deacetylase LPH39_10300 PF00462 Glutaredoxin LPH39_10310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH39_10310 PF03466 LysR substrate binding domain LPH39_10320 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LPH39_10330 PF00857 Isochorismatase family LPH39_10340 PF00107 Zinc-binding dehydrogenase LPH39_10340 PF08240 Alcohol dehydrogenase GroES-like domain LPH39_10345 PF00107 Zinc-binding dehydrogenase LPH39_10345 PF08240 Alcohol dehydrogenase GroES-like domain LPH39_10365 PF00873 AcrB/AcrD/AcrF family LPH39_10370 PF00873 AcrB/AcrD/AcrF family LPH39_10375 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LPH39_10380 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term LPH39_10380 PF14489 QueF-like protein LPH39_10395 PF00330 Aconitase family (aconitate hydratase) LPH39_10400 PF00694 Aconitase C-terminal domain LPH39_10405 PF00180 Isocitrate/isopropylmalate dehydrogenase LPH39_10420 PF02397 Bacterial sugar transferase LPH39_10435 PF13439 Glycosyltransferase Family 4 LPH39_10435 PF00534 Glycosyl transferases group 1 LPH39_10445 PF01943 Polysaccharide biosynthesis protein LPH39_10460 PF00072 Response regulator receiver domain LPH39_10460 PF00486 Transcriptional regulatory protein, C terminal LPH39_10465 PF05958 tRNA (Uracil-5-)-methyltransferase LPH39_10470 PF01928 CYTH domain LPH39_10475 PF00933 Glycosyl hydrolase family 3 N terminal domain LPH39_10480 PF00156 Phosphoribosyl transferase domain LPH39_10485 PF01048 Phosphorylase superfamily LPH39_10490 PF00313 'Cold-shock' DNA-binding domain LPH39_10500 PF01668 SmpB protein LPH39_10510 PF03658 RnfH family Ubiquitin LPH39_10515 PF04355 SmpA / OmlA family LPH39_10520 PF01475 Ferric uptake regulator family LPH39_10525 PF02463 RecF/RecN/SMC N terminal domain LPH39_10530 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding LPH39_10530 PF01628 HrcA protein C terminal domain LPH39_10535 PF01025 GrpE LPH39_10540 PF00012 Hsp70 protein LPH39_10545 PF01556 DnaJ C terminal domain LPH39_10545 PF00684 DnaJ central domain LPH39_10545 PF00226 DnaJ domain LPH39_10555 PF00072 Response regulator receiver domain LPH39_10555 PF00486 Transcriptional regulatory protein, C terminal LPH39_10560 PF01219 Prokaryotic diacylglycerol kinase LPH39_10565 PF01790 Prolipoprotein diacylglyceryl transferase LPH39_10570 PF00303 Thymidylate synthase LPH39_10575 PF00186 Dihydrofolate reductase LPH39_10580 PF13700 Domain of unknown function (DUF4158) LPH39_10580 PF01526 Tn3 transposase DDE domain LPH39_10590 PF00072 Response regulator receiver domain LPH39_10590 PF00486 Transcriptional regulatory protein, C terminal LPH39_10595 PF13493 Domain of unknown function (DUF4118) LPH39_10595 PF13492 GAF domain LPH39_10595 PF00512 His Kinase A (phospho-acceptor) domain LPH39_10595 PF02702 Osmosensitive K+ channel His kinase sensor domain LPH39_10595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH39_10600 PF02669 K+-transporting ATPase, c chain LPH39_10610 PF03814 Potassium-transporting ATPase A subunit LPH39_10625 PF00149 Calcineurin-like phosphoesterase LPH39_10630 PF04379 ApaG domain LPH39_10635 PF00398 Ribosomal RNA adenine dimethylase LPH39_10640 PF00929 Exonuclease LPH39_10645 PF01895 PhoU domain LPH39_10650 PF00005 ABC transporter LPH39_10655 PF00528 Binding-protein-dependent transport system inner membrane component LPH39_10660 PF00528 Binding-protein-dependent transport system inner membrane component LPH39_10665 PF12849 PBP superfamily domain LPH39_10670 PF02254 TrkA-N domain LPH39_10670 PF00999 Sodium/hydrogen exchanger family LPH39_10675 PF07715 TonB-dependent Receptor Plug Domain LPH39_10675 PF00593 TonB dependent receptor LPH39_10680 PF01323 DSBA-like thioredoxin domain LPH39_10690 PF00005 ABC transporter LPH39_10690 PF12848 ABC transporter LPH39_10705 PF01066 CDP-alcohol phosphatidyltransferase LPH39_10710 PF08459 UvrC Helix-hairpin-helix N-terminal LPH39_10710 PF02151 UvrB/uvrC motif LPH39_10710 PF01541 GIY-YIG catalytic domain LPH39_10715 PF01451 Low molecular weight phosphotyrosine protein phosphatase LPH39_10720 PF02348 Cytidylyltransferase LPH39_10725 PF10609 NUBPL iron-transfer P-loop NTPase LPH39_10730 PF00202 Aminotransferase class-III LPH39_10740 PF00490 Delta-aminolevulinic acid dehydratase LPH39_10750 PF12146 Serine aminopeptidase, S33 LPH39_10765 PF01134 Glucose inhibited division protein A LPH39_10765 PF13932 GidA associated domain LPH39_10785 PF13649 Methyltransferase domain LPH39_10805 PF02649 Type I GTP cyclohydrolase folE2 LPH39_10810 PF00132 Bacterial transferase hexapeptide (six repeats) LPH39_10815 PF00873 AcrB/AcrD/AcrF family LPH39_10820 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LPH39_10820 PF00529 HlyD membrane-fusion protein of T1SS LPH39_10825 PF05088 Bacterial NAD-glutamate dehydrogenase LPH39_10830 PF01513 ATP-NAD kinase LPH39_10850 PF12706 Beta-lactamase superfamily domain LPH39_10860 PF00929 Exonuclease LPH39_10860 PF08411 Exonuclease C-terminal LPH39_10880 PF00999 Sodium/hydrogen exchanger family LPH39_10890 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LPH39_10900 PF01812 5-formyltetrahydrofolate cyclo-ligase family LPH39_10920 PF03695 Uncharacterised protein family (UPF0149) LPH39_10925 PF00557 Metallopeptidase family M24 LPH39_10925 PF05195 Aminopeptidase P, N-terminal domain LPH39_10930 PF00293 NUDIX domain LPH39_10965 PF01063 Amino-transferase class IV LPH39_10980 PF02954 Bacterial regulatory protein, Fis family LPH39_10990 PF01381 Helix-turn-helix LPH39_11005 PF00535 Glycosyl transferase family 2 LPH39_11015 PF00925 GTP cyclohydrolase II LPH39_11025 PF08534 Redoxin LPH39_11050 PF00959 Phage lysozyme LPH39_11070 PF01367 5'-3' exonuclease, C-terminal SAM fold LPH39_11070 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LPH39_11070 PF00476 DNA polymerase family A LPH39_11070 PF01612 3'-5' exonuclease LPH39_11095 PF07963 Prokaryotic N-terminal methylation motif LPH39_11095 PF00114 Pilin (bacterial filament) LPH39_11110 PF16123 Hydroxyacylglutathione hydrolase C-terminus LPH39_11110 PF00753 Metallo-beta-lactamase superfamily LPH39_11120 PF00075 RNase H LPH39_11125 PF00929 Exonuclease LPH39_11145 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LPH39_11155 PF13632 Glycosyl transferase family group 2 LPH39_11160 PF02230 Phospholipase/Carboxylesterase LPH39_11165 PF07694 5TMR of 5TMR-LYT LPH39_11165 PF06580 Histidine kinase LPH39_11170 PF04397 LytTr DNA-binding domain LPH39_11170 PF00072 Response regulator receiver domain LPH39_11175 PF03900 Porphobilinogen deaminase, C-terminal domain LPH39_11175 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LPH39_11195 PF00437 Type II/IV secretion system protein LPH39_11200 PF00437 Type II/IV secretion system protein LPH39_11215 PF00535 Glycosyl transferase family 2 LPH39_11225 PF02801 Beta-ketoacyl synthase, C-terminal domain LPH39_11225 PF00109 Beta-ketoacyl synthase, N-terminal domain LPH39_11240 PF09924 Uncharacterised conserved protein (DUF2156) LPH39_11240 PF03706 Lysylphosphatidylglycerol synthase TM region LPH39_11245 PF01042 Endoribonuclease L-PSP LPH39_11260 PF01430 Hsp33 protein LPH39_11265 PF00912 Transglycosylase LPH39_11270 PF05190 MutS family domain IV LPH39_11270 PF01624 MutS domain I LPH39_11270 PF05188 MutS domain II LPH39_11270 PF05192 MutS domain III LPH39_11270 PF00488 MutS domain V LPH39_11275 PF01168 Alanine racemase, N-terminal domain LPH39_11290 PF08279 HTH domain LPH39_11290 PF02237 Biotin protein ligase C terminal domain LPH39_11290 PF03099 Biotin/lipoate A/B protein ligase family LPH39_11295 PF03309 Type III pantothenate kinase LPH39_11325 PF01183 Glycosyl hydrolases family 25 LPH39_11345 PF01381 Helix-turn-helix LPH39_11355 PF07963 Prokaryotic N-terminal methylation motif LPH39_11355 PF00114 Pilin (bacterial filament) LPH39_11455 PF00589 Phage integrase family LPH39_11470 PF00959 Phage lysozyme LPH39_11485 PF00574 Clp protease LPH39_11525 PF01022 Bacterial regulatory protein, arsR family LPH39_11540 PF00873 AcrB/AcrD/AcrF family LPH39_11565 PF00581 Rhodanese-like domain LPH39_11570 PF02556 Preprotein translocase subunit SecB LPH39_11575 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LPH39_11575 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LPH39_11605 PF12169 DNA polymerase III subunits gamma and tau domain III LPH39_11605 PF12170 DNA polymerase III tau subunit V interacting with alpha LPH39_11610 PF02575 YbaB/EbfC DNA-binding family LPH39_11615 PF13662 Toprim domain LPH39_11615 PF02132 RecR protein LPH39_11620 PF01230 HIT domain LPH39_11630 PF11992 Domain of unknown function (DUF3488) LPH39_11630 PF13559 Domain of unknown function (DUF4129) LPH39_11630 PF01841 Transglutaminase-like superfamily LPH39_11640 PF07726 ATPase family associated with various cellular activities (AAA) LPH39_11640 PF17863 AAA lid domain LPH39_11650 PF02620 Large ribosomal RNA subunit accumulation protein YceD LPH39_11655 PF01783 Ribosomal L32p protein family LPH39_11660 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LPH39_11660 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LPH39_11675 PF01341 Glycosyl hydrolases family 6 LPH39_11675 PF00041 Fibronectin type III domain LPH39_11675 PF00553 Cellulose binding domain LPH39_11680 PF00682 HMGL-like LPH39_11680 PF08502 LeuA allosteric (dimerisation) domain LPH39_11685 PF00291 Pyridoxal-phosphate dependent enzyme LPH39_11695 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LPH39_11695 PF00205 Thiamine pyrophosphate enzyme, central domain LPH39_11695 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LPH39_11700 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LPH39_11700 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LPH39_11705 PF11818 C-terminal domain of tail specific protease (DUF3340) LPH39_11705 PF00595 PDZ domain LPH39_11705 PF03572 Peptidase family S41 LPH39_11705 PF17804 Tail specific protease N-terminal domain LPH39_11710 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family LPH39_11715 PF02566 OsmC-like protein LPH39_11720 PF03969 AFG1-like ATPase LPH39_11725 PF02129 X-Pro dipeptidyl-peptidase (S15 family) LPH39_11730 PF02492 CobW/HypB/UreG, nucleotide-binding domain LPH39_11730 PF07683 Cobalamin synthesis protein cobW C-terminal domain LPH39_11740 PF00551 Formyl transferase LPH39_11750 PF03109 ABC1 family LPH39_11760 PF07055 Enoyl reductase FAD binding domain LPH39_11760 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase LPH39_11760 PF12241 Trans-2-enoyl-CoA reductase catalytic region LPH39_11780 PF00881 Nitroreductase family LPH39_11785 PF04264 YceI-like domain LPH39_11790 PF02673 Bacitracin resistance protein BacA LPH39_11795 PF00120 Glutamine synthetase, catalytic domain LPH39_11795 PF03951 Glutamine synthetase, beta-Grasp domain LPH39_11800 PF00543 Nitrogen regulatory protein P-II LPH39_11805 PF00909 Ammonium Transporter Family LPH39_11820 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LPH39_11820 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LPH39_11825 PF00890 FAD binding domain LPH39_11825 PF02910 Fumarate reductase flavoprotein C-term LPH39_11830 PF02445 Quinolinate synthetase A protein LPH39_11835 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LPH39_11835 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LPH39_11840 PF01026 TatD related DNase LPH39_11925 PF01850 PIN domain