locus-tag class description LPH61_00005 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ LPH61_00010 PF04221 RelB antitoxin LPH61_00085 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system LPH61_00140 PF06508 Queuosine biosynthesis protein QueC LPH61_00145 PF02938 GAD domain LPH61_00145 PF00152 tRNA synthetases class II (D, K and N) LPH61_00145 PF01336 OB-fold nucleic acid binding domain LPH61_00165 PF05681 Fumarate hydratase (Fumerase) LPH61_00165 PF05683 Fumarase C-terminus LPH61_00185 PF01648 4'-phosphopantetheinyl transferase superfamily LPH61_00190 PF02527 rRNA small subunit methyltransferase G LPH61_00195 PF02779 Transketolase, pyrimidine binding domain LPH61_00195 PF02780 Transketolase, C-terminal domain LPH61_00195 PF00456 Transketolase, thiamine diphosphate binding domain LPH61_00200 PF00375 Sodium:dicarboxylate symporter family LPH61_00210 PF01625 Peptide methionine sulfoxide reductase LPH61_00225 PF01432 Peptidase family M3 LPH61_00230 PF06903 VirK protein LPH61_00235 PF02875 Mur ligase family, glutamate ligase domain LPH61_00235 PF08245 Mur ligase middle domain LPH61_00250 PF00156 Phosphoribosyl transferase domain LPH61_00260 PF00072 Response regulator receiver domain LPH61_00260 PF01339 CheB methylesterase LPH61_00265 PF01584 CheW-like domain LPH61_00265 PF02895 Signal transducing histidine kinase, homodimeric domain LPH61_00265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH61_00265 PF01627 Hpt domain LPH61_00265 PF00072 Response regulator receiver domain LPH61_00270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LPH61_00270 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LPH61_00275 PF01584 CheW-like domain LPH61_00280 PF00072 Response regulator receiver domain LPH61_00285 PF02951 Prokaryotic glutathione synthetase, N-terminal domain LPH61_00285 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain LPH61_00300 PF05746 DALR anticodon binding domain LPH61_00300 PF02092 Glycyl-tRNA synthetase beta subunit LPH61_00305 PF02091 Glycyl-tRNA synthetase alpha subunit LPH61_00310 PF00795 Carbon-nitrogen hydrolase LPH61_00310 PF02540 NAD synthase LPH61_00335 PF03692 Putative zinc- or iron-chelating domain LPH61_00350 PF00561 alpha/beta hydrolase fold LPH61_00360 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LPH61_00360 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LPH61_00370 PF00588 SpoU rRNA Methylase family LPH61_00380 PF01808 AICARFT/IMPCHase bienzyme LPH61_00380 PF02142 MGS-like domain LPH61_00385 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LPH61_00385 PF02843 Phosphoribosylglycinamide synthetase, C domain LPH61_00385 PF02844 Phosphoribosylglycinamide synthetase, N domain LPH61_00405 PF12805 FUSC-like inner membrane protein yccS LPH61_00415 PF03186 CobD/Cbib protein LPH61_00420 PF05658 Head domain of trimeric autotransporter adhesin LPH61_00420 PF05662 Coiled stalk of trimeric autotransporter adhesin LPH61_00420 PF03895 YadA-like membrane anchor domain LPH61_00425 PF01227 GTP cyclohydrolase I LPH61_00435 PF00132 Bacterial transferase hexapeptide (six repeats) LPH61_00440 PF00588 SpoU rRNA Methylase family LPH61_00440 PF08032 RNA 2'-O ribose methyltransferase substrate binding LPH61_00445 PF00773 RNB domain LPH61_00445 PF17876 Cold shock domain LPH61_00445 PF08461 Ribonuclease R winged-helix domain LPH61_00445 PF08206 Ribonuclease B OB domain LPH61_00445 PF00575 S1 RNA binding domain LPH61_00455 PF00959 Phage lysozyme LPH61_00525 PF02129 X-Pro dipeptidyl-peptidase (S15 family) LPH61_00530 PF07690 Major Facilitator Superfamily LPH61_00535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH61_00535 PF03466 LysR substrate binding domain LPH61_00550 PF01161 Phosphatidylethanolamine-binding protein LPH61_00555 PF00719 Inorganic pyrophosphatase LPH61_00560 PF00085 Thioredoxin LPH61_00570 PF08264 Anticodon-binding domain of tRNA LPH61_00570 PF00133 tRNA synthetases class I (I, L, M and V) LPH61_00570 PF13603 Leucyl-tRNA synthetase, Domain 2 LPH61_00585 PF01467 Cytidylyltransferase-like LPH61_00600 PF13406 Transglycosylase SLT domain LPH61_00605 PF05036 Sporulation related domain LPH61_00605 PF03330 Lytic transglycolase LPH61_00710 PF05860 haemagglutination activity domain LPH61_00710 PF15605 Bacterial toxin 28 LPH61_00710 PF04829 Pre-toxin domain with VENN motif LPH61_00710 PF13332 Hemagglutinin repeat LPH61_00740 PF04829 Pre-toxin domain with VENN motif LPH61_00740 PF13332 Hemagglutinin repeat LPH61_00740 PF05860 haemagglutination activity domain LPH61_00745 PF04829 Pre-toxin domain with VENN motif LPH61_00745 PF13018 Extended Signal Peptide of Type V secretion system LPH61_00745 PF05860 haemagglutination activity domain LPH61_00745 PF13332 Hemagglutinin repeat LPH61_00840 PF13332 Hemagglutinin repeat LPH61_00840 PF05860 haemagglutination activity domain LPH61_00840 PF15605 Bacterial toxin 28 LPH61_00840 PF04829 Pre-toxin domain with VENN motif LPH61_00840 PF15605 Bacterial toxin 28 LPH61_00840 PF05860 haemagglutination activity domain LPH61_00840 PF13332 Hemagglutinin repeat LPH61_00840 PF04829 Pre-toxin domain with VENN motif LPH61_00845 PF04829 Pre-toxin domain with VENN motif LPH61_00845 PF05860 haemagglutination activity domain LPH61_00845 PF13332 Hemagglutinin repeat LPH61_00845 PF13018 Extended Signal Peptide of Type V secretion system LPH61_00860 PF01810 LysE type translocator LPH61_00880 PF01132 Elongation factor P (EF-P) OB domain LPH61_00880 PF09285 Elongation factor P, C-terminal LPH61_00880 PF08207 Elongation factor P (EF-P) KOW-like domain LPH61_00885 PF02913 FAD linked oxidases, C-terminal domain LPH61_00885 PF01565 FAD binding domain LPH61_00890 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LPH61_00890 PF01842 ACT domain LPH61_00890 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LPH61_00895 PF13520 Amino acid permease LPH61_00900 PF13520 Amino acid permease LPH61_00905 PF00596 Class II Aldolase and Adducin N-terminal domain LPH61_00910 PF03079 ARD/ARD' family LPH61_00940 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LPH61_00940 PF01502 Phosphoribosyl-AMP cyclohydrolase LPH61_00945 PF00977 Histidine biosynthesis protein LPH61_00950 PF00977 Histidine biosynthesis protein LPH61_00955 PF00117 Glutamine amidotransferase class-I LPH61_00960 PF00475 Imidazoleglycerol-phosphate dehydratase LPH61_00965 PF00155 Aminotransferase class I and II LPH61_00970 PF00815 Histidinol dehydrogenase LPH61_00975 PF01634 ATP phosphoribosyltransferase LPH61_00975 PF08029 HisG, C-terminal domain LPH61_00990 PF03129 Anticodon binding domain LPH61_00990 PF13393 Histidyl-tRNA synthetase LPH61_00995 PF00291 Pyridoxal-phosphate dependent enzyme LPH61_00995 PF14821 Threonine synthase N terminus LPH61_01000 PF00288 GHMP kinases N terminal domain LPH61_01000 PF08544 GHMP kinases C terminal LPH61_01005 PF00696 Amino acid kinase family LPH61_01005 PF13840 ACT domain LPH61_01005 PF00742 Homoserine dehydrogenase LPH61_01005 PF03447 Homoserine dehydrogenase, NAD binding domain LPH61_01005 PF01842 ACT domain LPH61_01015 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LPH61_01015 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LPH61_01020 PF03652 Holliday junction resolvase LPH61_01025 PF02622 Uncharacterized ACR, COG1678 LPH61_01030 PF07943 Penicillin-binding protein 5, C-terminal domain LPH61_01030 PF00768 D-alanyl-D-alanine carboxypeptidase LPH61_01035 PF00141 Peroxidase LPH61_01040 PF00226 DnaJ domain LPH61_01040 PF01556 DnaJ C terminal domain LPH61_01050 PF06832 Penicillin-Binding Protein C-terminus Family LPH61_01050 PF00912 Transglycosylase LPH61_01050 PF00905 Penicillin binding protein transpeptidase domain LPH61_01055 PF07715 TonB-dependent Receptor Plug Domain LPH61_01055 PF00593 TonB dependent receptor LPH61_01075 PF04542 Sigma-70 region 2 LPH61_01075 PF08281 Sigma-70, region 4 LPH61_01085 PF13180 PDZ domain LPH61_01090 PF06421 GTP-binding protein LepA C-terminus LPH61_01090 PF03144 Elongation factor Tu domain 2 LPH61_01090 PF00009 Elongation factor Tu GTP binding domain LPH61_01090 PF00679 Elongation factor G C-terminus LPH61_01095 PF10502 Signal peptidase, peptidase S26 LPH61_01105 PF00035 Double-stranded RNA binding motif LPH61_01105 PF14622 Ribonuclease-III-like LPH61_01110 PF01926 50S ribosome-binding GTPase LPH61_01110 PF07650 KH domain LPH61_01115 PF11967 Recombination protein O N terminal LPH61_01115 PF02565 Recombination protein O C terminal LPH61_01120 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LPH61_01120 PF02780 Transketolase, C-terminal domain LPH61_01120 PF02779 Transketolase, pyrimidine binding domain LPH61_01130 PF00474 Sodium:solute symporter family LPH61_01140 PF16177 Acetyl-coenzyme A synthetase N-terminus LPH61_01140 PF00501 AMP-binding enzyme LPH61_01140 PF13193 AMP-binding enzyme C-terminal domain LPH61_01145 PF02659 Putative manganese efflux pump LPH61_01150 PF00106 short chain dehydrogenase LPH61_01165 PF13360 PQQ-like domain LPH61_01170 PF07676 WD40-like Beta Propeller Repeat LPH61_01170 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region LPH61_01170 PF00326 Prolyl oligopeptidase family LPH61_01175 PF03169 OPT oligopeptide transporter protein LPH61_01180 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LPH61_01180 PF01266 FAD dependent oxidoreductase LPH61_01185 PF00230 Major intrinsic protein LPH61_01190 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LPH61_01190 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LPH61_01205 PF08267 Cobalamin-independent synthase, N-terminal domain LPH61_01205 PF01717 Cobalamin-independent synthase, Catalytic domain LPH61_01210 PF02677 Epoxyqueuosine reductase QueH LPH61_01220 PF00501 AMP-binding enzyme LPH61_01230 PF00535 Glycosyl transferase family 2 LPH61_01235 PF01370 NAD dependent epimerase/dehydratase family LPH61_01240 PF17762 HTH domain found in ParB protein LPH61_01240 PF02195 ParB-like nuclease domain LPH61_01245 PF13614 AAA domain LPH61_01260 PF02403 Seryl-tRNA synthetase N-terminal domain LPH61_01260 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LPH61_01265 PF03544 Gram-negative bacterial TonB protein C-terminal LPH61_01270 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LPH61_01275 PF01842 ACT domain LPH61_01275 PF01817 Chorismate mutase type II LPH61_01275 PF00800 Prephenate dehydratase LPH61_01280 PF00266 Aminotransferase class-V LPH61_01290 PF12679 ABC-2 family transporter protein LPH61_01295 PF00005 ABC transporter LPH61_01325 PF00440 Bacterial regulatory proteins, tetR family LPH61_01330 PF01209 ubiE/COQ5 methyltransferase family LPH61_01340 PF00294 pfkB family carbohydrate kinase LPH61_01345 PF07690 Major Facilitator Superfamily LPH61_01355 PF04102 SlyX LPH61_01360 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LPH61_01360 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LPH61_01360 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LPH61_01365 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LPH61_01365 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LPH61_01370 PF00255 Glutathione peroxidase LPH61_01380 PF00005 ABC transporter LPH61_01395 PF10415 Fumarase C C-terminus LPH61_01395 PF00206 Lyase LPH61_01400 PF08328 Adenylosuccinate lyase C-terminal LPH61_01400 PF00206 Lyase LPH61_01405 PF08007 Cupin superfamily protein LPH61_01410 PF16078 2-oxoglutarate dehydrogenase N-terminus LPH61_01410 PF16870 2-oxoglutarate dehydrogenase C-terminal LPH61_01410 PF02779 Transketolase, pyrimidine binding domain LPH61_01410 PF00676 Dehydrogenase E1 component LPH61_01415 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LPH61_01415 PF02817 e3 binding domain LPH61_01415 PF00364 Biotin-requiring enzyme LPH61_01425 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LPH61_01425 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPH61_01435 PF00899 ThiF family LPH61_01450 PF00325 Bacterial regulatory proteins, crp family LPH61_01450 PF00027 Cyclic nucleotide-binding domain LPH61_01455 PF02675 S-adenosylmethionine decarboxylase LPH61_01460 PF03232 Ubiquinone biosynthesis protein COQ7 LPH61_01465 PF00572 Ribosomal protein L13 LPH61_01470 PF00380 Ribosomal protein S9/S16 LPH61_01475 PF00285 Citrate synthase, C-terminal domain LPH61_01480 PF01197 Ribosomal protein L31 LPH61_01485 PF00814 Glycoprotease family LPH61_01490 PF03466 LysR substrate binding domain LPH61_01490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH61_01495 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPH61_01495 PF13192 Thioredoxin domain LPH61_01500 PF00578 AhpC/TSA family LPH61_01500 PF10417 C-terminal domain of 1-Cys peroxiredoxin LPH61_01505 PF13018 Extended Signal Peptide of Type V secretion system LPH61_01505 PF03895 YadA-like membrane anchor domain LPH61_01505 PF05658 Head domain of trimeric autotransporter adhesin LPH61_01505 PF05662 Coiled stalk of trimeric autotransporter adhesin LPH61_01510 PF00263 Bacterial type II and III secretion system protein LPH61_01510 PF03958 Bacterial type II/III secretion system short domain LPH61_01520 PF10741 Type II secretion system (T2SS), protein M subtype b LPH61_01525 PF05137 Fimbrial assembly protein (PilN) LPH61_01530 PF03934 Type II secretion system (T2SS), protein K LPH61_01540 PF03934 Type II secretion system (T2SS), protein K LPH61_01550 PF07963 Prokaryotic N-terminal methylation motif LPH61_01555 PF12019 Type II transport protein GspH LPH61_01560 PF08334 Type II secretion system (T2SS), protein G LPH61_01565 PF00482 Type II secretion system (T2SS), protein F LPH61_01570 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LPH61_01570 PF00437 Type II/IV secretion system protein LPH61_01590 PF17827 PrmC N-terminal domain LPH61_01590 PF05175 Methyltransferase small domain LPH61_01600 PF00561 alpha/beta hydrolase fold LPH61_01615 PF04055 Radical SAM superfamily LPH61_01615 PF06969 HemN C-terminal domain LPH61_01620 PF01725 Ham1 family LPH61_01625 PF01138 3' exoribonuclease family, domain 1 LPH61_01625 PF03725 3' exoribonuclease family, domain 2 LPH61_01630 PF03755 YicC-like family, N-terminal region LPH61_01630 PF08340 Domain of unknown function (DUF1732) LPH61_01635 PF00625 Guanylate kinase LPH61_01640 PF01192 RNA polymerase Rpb6 LPH61_01645 PF00009 Elongation factor Tu GTP binding domain LPH61_01650 PF01507 Phosphoadenosine phosphosulfate reductase family LPH61_01655 PF00175 Oxidoreductase NAD-binding domain LPH61_01655 PF00258 Flavodoxin LPH61_01655 PF00667 FAD binding domain LPH61_01660 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LPH61_01660 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LPH61_01665 PF01507 Phosphoadenosine phosphosulfate reductase family LPH61_01690 PF13369 Transglutaminase-like superfamily LPH61_01725 PF11838 ERAP1-like C-terminal domain LPH61_01725 PF01433 Peptidase family M1 domain LPH61_01730 PF01209 ubiE/COQ5 methyltransferase family LPH61_01740 PF07724 AAA domain (Cdc48 subfamily) LPH61_01740 PF10431 C-terminal, D2-small domain, of ClpB protein LPH61_01740 PF00004 ATPase family associated with various cellular activities (AAA) LPH61_01745 PF00227 Proteasome subunit LPH61_01755 PF02899 Phage integrase, N-terminal SAM-like domain LPH61_01755 PF00589 Phage integrase family LPH61_01765 PF01678 Diaminopimelate epimerase LPH61_01775 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LPH61_01775 PF00326 Prolyl oligopeptidase family LPH61_01785 PF02082 Transcriptional regulator LPH61_01790 PF01458 Uncharacterized protein family (UPF0051) LPH61_01795 PF00005 ABC transporter LPH61_01800 PF01458 Uncharacterized protein family (UPF0051) LPH61_01805 PF00266 Aminotransferase class-V LPH61_01810 PF00355 Rieske [2Fe-2S] domain LPH61_01815 PF13439 Glycosyltransferase Family 4 LPH61_01815 PF00534 Glycosyl transferases group 1 LPH61_01820 PF01522 Polysaccharide deacetylase LPH61_01825 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LPH61_01825 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LPH61_01825 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LPH61_01825 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LPH61_01830 PF01039 Carboxyl transferase domain LPH61_01830 PF17848 Acetyl-coA carboxylase zinc finger domain LPH61_01845 PF01979 Amidohydrolase family LPH61_01850 PF01380 SIS domain LPH61_01860 PF07690 Major Facilitator Superfamily LPH61_01870 PF02685 Glucokinase LPH61_01895 PF00512 His Kinase A (phospho-acceptor) domain LPH61_01895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH61_01910 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LPH61_01915 PF00004 ATPase family associated with various cellular activities (AAA) LPH61_01915 PF16193 AAA C-terminal domain LPH61_01915 PF12002 MgsA AAA+ ATPase C terminal LPH61_01920 PF03548 Outer membrane lipoprotein carrier protein LolA LPH61_01935 PF01580 FtsK/SpoIIIE family LPH61_01935 PF09397 Ftsk gamma domain LPH61_01935 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LPH61_01935 PF17854 FtsK alpha domain LPH61_01940 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPH61_01950 PF03588 Leucyl/phenylalanyl-tRNA protein transferase LPH61_01955 PF01176 Translation initiation factor 1A / IF-1 LPH61_01960 PF00004 ATPase family associated with various cellular activities (AAA) LPH61_01960 PF07724 AAA domain (Cdc48 subfamily) LPH61_01960 PF17871 AAA lid domain LPH61_01960 PF02861 Clp amino terminal domain, pathogenicity island component LPH61_01960 PF10431 C-terminal, D2-small domain, of ClpB protein LPH61_01965 PF02617 ATP-dependent Clp protease adaptor protein ClpS LPH61_01970 PF00293 NUDIX domain LPH61_01980 PF04356 Protein of unknown function (DUF489) LPH61_01995 PF01323 DSBA-like thioredoxin domain LPH61_02005 PF01926 50S ribosome-binding GTPase LPH61_02010 PF04107 Glutamate-cysteine ligase family 2(GCS2) LPH61_02020 PF00202 Aminotransferase class-III LPH61_02025 PF00520 Ion transport protein LPH61_02025 PF00027 Cyclic nucleotide-binding domain LPH61_02030 PF02899 Phage integrase, N-terminal SAM-like domain LPH61_02030 PF00589 Phage integrase family LPH61_02035 PF13098 Thioredoxin-like domain LPH61_02035 PF10411 Disulfide bond isomerase protein N-terminus LPH61_02040 PF02769 AIR synthase related protein, C-terminal domain LPH61_02040 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LPH61_02040 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal LPH61_02050 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LPH61_02060 PF00571 CBS domain LPH61_02060 PF01380 SIS domain LPH61_02080 PF00005 ABC transporter LPH61_02080 PF12399 Branched-chain amino acid ATP-binding cassette transporter LPH61_02085 PF00309 Sigma-54 factor, Activator interacting domain (AID) LPH61_02085 PF04963 Sigma-54 factor, core binding domain LPH61_02085 PF04552 Sigma-54, DNA binding domain LPH61_02090 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LPH61_02095 PF02603 HPr Serine kinase N terminus LPH61_02095 PF07475 HPr Serine kinase C-terminal domain LPH61_02100 PF03668 P-loop ATPase protein family LPH61_02110 PF00381 PTS HPr component phosphorylation site LPH61_02115 PF05524 PEP-utilising enzyme, N-terminal LPH61_02115 PF00391 PEP-utilising enzyme, mobile domain LPH61_02115 PF02896 PEP-utilising enzyme, TIM barrel domain LPH61_02120 PF00571 CBS domain LPH61_02120 PF01769 Divalent cation transporter LPH61_02120 PF03448 MgtE intracellular N domain LPH61_02125 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LPH61_02160 PF04542 Sigma-70 region 2 LPH61_02160 PF08281 Sigma-70, region 4 LPH61_02170 PF00082 Subtilase family LPH61_02175 PF00436 Single-strand binding protein family LPH61_02180 PF00348 Polyprenyl synthetase LPH61_02185 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LPH61_02185 PF06481 COX Aromatic Rich Motif LPH61_02190 PF00115 Cytochrome C and Quinol oxidase polypeptide I LPH61_02195 PF00510 Cytochrome c oxidase subunit III LPH61_02200 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LPH61_02205 PF02347 Glycine cleavage system P-protein LPH61_02215 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LPH61_02215 PF00271 Helicase conserved C-terminal domain LPH61_02215 PF04408 Helicase associated domain (HA2) LPH61_02215 PF11898 Domain of unknown function (DUF3418) LPH61_02215 PF00270 DEAD/DEAH box helicase LPH61_02220 PF00210 Ferritin-like domain LPH61_02225 PF16124 RecQ zinc-binding LPH61_02225 PF00570 HRDC domain LPH61_02225 PF00271 Helicase conserved C-terminal domain LPH61_02225 PF00270 DEAD/DEAH box helicase LPH61_02225 PF09382 RQC domain LPH61_02245 PF00296 Luciferase-like monooxygenase LPH61_02250 PF18073 Rubredoxin metal binding domain LPH61_02265 PF00290 Tryptophan synthase alpha chain LPH61_02270 PF00291 Pyridoxal-phosphate dependent enzyme LPH61_02275 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LPH61_02280 PF01416 tRNA pseudouridine synthase LPH61_02290 PF01118 Semialdehyde dehydrogenase, NAD binding domain LPH61_02290 PF02774 Semialdehyde dehydrogenase, dimerisation domain LPH61_02300 PF01264 Chorismate synthase LPH61_02305 PF05175 Methyltransferase small domain LPH61_02315 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) LPH61_02315 PF06594 Haemolysin-type calcium binding protein related domain LPH61_02370 PF00348 Polyprenyl synthetase LPH61_02375 PF02609 Exonuclease VII small subunit LPH61_02380 PF01171 PP-loop family LPH61_02380 PF11734 TilS substrate C-terminal domain LPH61_02380 PF09179 TilS substrate binding domain LPH61_02390 PF00375 Sodium:dicarboxylate symporter family LPH61_02395 PF00877 NlpC/P60 family LPH61_02400 PF00877 NlpC/P60 family LPH61_02405 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LPH61_02410 PF04235 Protein of unknown function (DUF418) LPH61_02435 PF10576 Iron-sulfur binding domain of endonuclease III LPH61_02435 PF00633 Helix-hairpin-helix motif LPH61_02435 PF00730 HhH-GPD superfamily base excision DNA repair protein LPH61_02450 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LPH61_02450 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LPH61_02455 PF00293 NUDIX domain LPH61_02485 PF01488 Shikimate / quinate 5-dehydrogenase LPH61_02485 PF08501 Shikimate dehydrogenase substrate binding domain LPH61_02485 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LPH61_02490 PF02581 Thiamine monophosphate synthase LPH61_02490 PF08543 Phosphomethylpyrimidine kinase LPH61_02505 PF02683 Cytochrome C biogenesis protein transmembrane region LPH61_02505 PF11412 Disulphide bond corrector protein DsbC LPH61_02510 PF03091 CutA1 divalent ion tolerance protein LPH61_02515 PF00166 Chaperonin 10 Kd subunit LPH61_02520 PF00118 TCP-1/cpn60 chaperonin family LPH61_02545 PF01370 NAD dependent epimerase/dehydratase family LPH61_02550 PF01370 NAD dependent epimerase/dehydratase family LPH61_02555 PF16363 GDP-mannose 4,6 dehydratase LPH61_02570 PF00291 Pyridoxal-phosphate dependent enzyme LPH61_02590 PF00593 TonB dependent receptor LPH61_02590 PF07715 TonB-dependent Receptor Plug Domain LPH61_02595 PF13640 2OG-Fe(II) oxygenase superfamily LPH61_02595 PF18331 PKHD-type hydroxylase C-terminal domain LPH61_02615 PF02424 ApbE family LPH61_02620 PF00667 FAD binding domain LPH61_02620 PF00175 Oxidoreductase NAD-binding domain LPH61_02620 PF00258 Flavodoxin LPH61_02630 PF01636 Phosphotransferase enzyme family LPH61_02635 PF00483 Nucleotidyl transferase LPH61_02640 PF00308 Bacterial dnaA protein LPH61_02645 PF01594 AI-2E family transporter LPH61_02655 PF02769 AIR synthase related protein, C-terminal domain LPH61_02655 PF00586 AIR synthase related protein, N-terminal domain LPH61_02660 PF00551 Formyl transferase LPH61_02675 PF02223 Thymidylate kinase LPH61_02680 PF05649 Peptidase family M13 LPH61_02680 PF01431 Peptidase family M13 LPH61_02685 PF07977 FabA-like domain LPH61_02690 PF01171 PP-loop family LPH61_02695 PF04381 Putative exonuclease, RdgC LPH61_02705 PF00762 Ferrochelatase LPH61_02715 PF02416 mttA/Hcf106 family LPH61_02720 PF02416 mttA/Hcf106 family LPH61_02725 PF00902 Sec-independent protein translocase protein (TatC) LPH61_02735 PF00117 Glutamine amidotransferase class-I LPH61_02735 PF02540 NAD synthase LPH61_02735 PF00958 GMP synthase C terminal domain LPH61_02740 PF00127 Copper binding proteins, plastocyanin/azurin family LPH61_02745 PF03193 RsgA GTPase LPH61_02750 PF02021 Uncharacterised protein family UPF0102 LPH61_02755 PF04348 LppC putative lipoprotein LPH61_02760 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LPH61_02765 PF00593 TonB dependent receptor LPH61_02765 PF07715 TonB-dependent Receptor Plug Domain LPH61_02770 PF01588 Putative tRNA binding domain LPH61_02770 PF09334 tRNA synthetases class I (M) LPH61_02780 PF04060 Putative Fe-S cluster LPH61_02825 PF01546 Peptidase family M20/M25/M40 LPH61_02825 PF07687 Peptidase dimerisation domain LPH61_02850 PF05567 Neisseria PilC beta-propeller domain LPH61_02875 PF03641 Possible lysine decarboxylase LPH61_02875 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases LPH61_02875 PF11892 Domain of unknown function (DUF3412) LPH61_02885 PF00563 EAL domain LPH61_02885 PF12792 CSS motif domain associated with EAL LPH61_02895 PF00899 ThiF family LPH61_02900 PF01926 50S ribosome-binding GTPase LPH61_02900 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LPH61_02905 PF13360 PQQ-like domain LPH61_02905 PF01011 PQQ enzyme repeat LPH61_02925 PF04055 Radical SAM superfamily LPH61_02930 PF00334 Nucleoside diphosphate kinase LPH61_02935 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LPH61_02935 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LPH61_02940 PF00709 Adenylosuccinate synthetase LPH61_02950 PF01145 SPFH domain / Band 7 family LPH61_02955 PF01145 SPFH domain / Band 7 family LPH61_02955 PF12221 Bacterial membrane protein N terminal LPH61_02960 PF00107 Zinc-binding dehydrogenase LPH61_02960 PF08240 Alcohol dehydrogenase GroES-like domain LPH61_02965 PF00072 Response regulator receiver domain LPH61_02980 PF03129 Anticodon binding domain LPH61_02980 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LPH61_02980 PF04073 Aminoacyl-tRNA editing domain LPH61_02990 PF01066 CDP-alcohol phosphatidyltransferase LPH61_03000 PF00583 Acetyltransferase (GNAT) family LPH61_03015 PF00933 Glycosyl hydrolase family 3 N terminal domain LPH61_03015 PF14310 Fibronectin type III-like domain LPH61_03015 PF01915 Glycosyl hydrolase family 3 C-terminal domain LPH61_03020 PF00924 Mechanosensitive ion channel LPH61_03025 PF02152 Dihydroneopterin aldolase LPH61_03030 PF00814 Glycoprotease family LPH61_03035 PF01165 Ribosomal protein S21 LPH61_03040 PF09424 Yqey-like protein LPH61_03045 PF03631 Virulence factor BrkB LPH61_03050 PF01807 CHC2 zinc finger LPH61_03050 PF08278 DNA primase DnaG DnaB-binding LPH61_03050 PF10410 DnaB-helicase binding domain of primase LPH61_03050 PF08275 DNA primase catalytic core, N-terminal domain LPH61_03060 PF00579 tRNA synthetases class I (W and Y) LPH61_03065 PF13538 UvrD-like helicase C-terminal domain LPH61_03070 PF12705 PD-(D/E)XK nuclease superfamily LPH61_03070 PF00580 UvrD/REP helicase N-terminal domain LPH61_03070 PF13361 UvrD-like helicase C-terminal domain LPH61_03075 PF17946 RecC C-terminal domain LPH61_03080 PF00005 ABC transporter LPH61_03085 PF02405 Permease MlaE LPH61_03090 PF02470 MlaD protein LPH61_03095 PF05494 MlaC protein LPH61_03105 PF04333 MlaA lipoprotein LPH61_03110 PF02646 RmuC family LPH61_03115 PF00005 ABC transporter LPH61_03130 PF13520 Amino acid permease LPH61_03140 PF17785 PUA-like domain LPH61_03140 PF10672 S-adenosylmethionine-dependent methyltransferase LPH61_03145 PF03741 Integral membrane protein TerC family LPH61_03160 PF01521 Iron-sulphur cluster biosynthesis LPH61_03175 PF00486 Transcriptional regulatory protein, C terminal LPH61_03175 PF00072 Response regulator receiver domain LPH61_03180 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LPH61_03180 PF01627 Hpt domain LPH61_03180 PF00072 Response regulator receiver domain LPH61_03180 PF00512 His Kinase A (phospho-acceptor) domain LPH61_03180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH61_03180 PF00672 HAMP domain LPH61_03185 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LPH61_03185 PF00072 Response regulator receiver domain LPH61_03185 PF01627 Hpt domain LPH61_03185 PF00512 His Kinase A (phospho-acceptor) domain LPH61_03185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH61_03185 PF00672 HAMP domain LPH61_03190 PF00210 Ferritin-like domain LPH61_03215 PF02772 S-adenosylmethionine synthetase, central domain LPH61_03215 PF00438 S-adenosylmethionine synthetase, N-terminal domain LPH61_03215 PF02773 S-adenosylmethionine synthetase, C-terminal domain LPH61_03225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH61_03230 PF00486 Transcriptional regulatory protein, C terminal LPH61_03230 PF00072 Response regulator receiver domain LPH61_03240 PF01207 Dihydrouridine synthase (Dus) LPH61_03245 PF00593 TonB dependent receptor LPH61_03245 PF07715 TonB-dependent Receptor Plug Domain LPH61_03260 PF00004 ATPase family associated with various cellular activities (AAA) LPH61_03260 PF07724 AAA domain (Cdc48 subfamily) LPH61_03260 PF17871 AAA lid domain LPH61_03260 PF10431 C-terminal, D2-small domain, of ClpB protein LPH61_03260 PF02861 Clp amino terminal domain, pathogenicity island component LPH61_03270 PF00301 Rubredoxin LPH61_03275 PF02581 Thiamine monophosphate synthase LPH61_03290 PF00067 Cytochrome P450 LPH61_03320 PF03796 DnaB-like helicase C terminal domain LPH61_03320 PF00772 DnaB-like helicase N terminal domain LPH61_03325 PF05736 OprF membrane domain LPH61_03325 PF00691 OmpA family LPH61_03335 PF00248 Aldo/keto reductase family LPH61_03340 PF00912 Transglycosylase LPH61_03340 PF17092 Penicillin-binding protein OB-like domain LPH61_03340 PF00905 Penicillin binding protein transpeptidase domain LPH61_03345 PF11104 Type IV pilus assembly protein PilM; LPH61_03350 PF05137 Fimbrial assembly protein (PilN) LPH61_03355 PF04350 Pilus assembly protein, PilO LPH61_03360 PF04351 Pilus assembly protein, PilP LPH61_03365 PF11741 AMIN domain LPH61_03365 PF03958 Bacterial type II/III secretion system short domain LPH61_03365 PF07660 Secretin and TonB N terminus short domain LPH61_03365 PF00263 Bacterial type II and III secretion system protein LPH61_03375 PF08019 Phosphoethanolamine transferase EptA/EptB LPH61_03375 PF00884 Sulfatase LPH61_03380 PF00067 Cytochrome P450 LPH61_03385 PF00270 DEAD/DEAH box helicase LPH61_03385 PF00271 Helicase conserved C-terminal domain LPH61_03385 PF17191 RecG wedge domain LPH61_03390 PF01042 Endoribonuclease L-PSP LPH61_03395 PF13291 ACT domain LPH61_03395 PF04607 Region found in RelA / SpoT proteins LPH61_03395 PF02824 TGS domain LPH61_03405 PF01565 FAD binding domain LPH61_03405 PF02913 FAD linked oxidases, C-terminal domain LPH61_03410 PF00691 OmpA family LPH61_03410 PF05736 OprF membrane domain LPH61_03415 PF02600 Disulfide bond formation protein DsbB LPH61_03420 PF07715 TonB-dependent Receptor Plug Domain LPH61_03420 PF00593 TonB dependent receptor LPH61_03425 PF02590 Predicted SPOUT methyltransferase LPH61_03440 PF12344 Ultra-violet resistance protein B LPH61_03440 PF00271 Helicase conserved C-terminal domain LPH61_03440 PF17757 UvrB interaction domain LPH61_03440 PF04851 Type III restriction enzyme, res subunit LPH61_03440 PF02151 UvrB/uvrC motif LPH61_03455 PF00701 Dihydrodipicolinate synthetase family LPH61_03465 PF00578 AhpC/TSA family LPH61_03470 PF13638 PIN domain LPH61_03470 PF02562 PhoH-like protein LPH61_03490 PF02769 AIR synthase related protein, C-terminal domain LPH61_03490 PF00586 AIR synthase related protein, N-terminal domain LPH61_03495 PF01029 NusB family LPH61_03500 PF00885 6,7-dimethyl-8-ribityllumazine synthase LPH61_03505 PF00925 GTP cyclohydrolase II LPH61_03505 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LPH61_03510 PF00677 Lumazine binding domain LPH61_03515 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LPH61_03515 PF01872 RibD C-terminal domain LPH61_03525 PF03477 ATP cone domain LPH61_03535 PF00464 Serine hydroxymethyltransferase LPH61_03540 PF12848 ABC transporter LPH61_03540 PF00005 ABC transporter LPH61_03545 PF06039 Malate:quinone oxidoreductase (Mqo) LPH61_03550 PF04134 Protein of unknown function, DUF393 LPH61_03555 PF02578 Multi-copper polyphenol oxidoreductase laccase LPH61_03560 PF00849 RNA pseudouridylate synthase LPH61_03560 PF01479 S4 domain LPH61_03565 PF13525 Outer membrane lipoprotein LPH61_03575 PF02421 Ferrous iron transport protein B LPH61_03575 PF07670 Nucleoside recognition LPH61_03575 PF07664 Ferrous iron transport protein B C terminus LPH61_03595 PF04386 Stringent starvation protein B LPH61_03600 PF00043 Glutathione S-transferase, C-terminal domain LPH61_03600 PF02798 Glutathione S-transferase, N-terminal domain LPH61_03620 PF01464 Transglycosylase SLT domain LPH61_03625 PF00919 Uncharacterized protein family UPF0004 LPH61_03625 PF04055 Radical SAM superfamily LPH61_03625 PF01938 TRAM domain LPH61_03630 PF02562 PhoH-like protein LPH61_03635 PF02130 Uncharacterized protein family UPF0054 LPH61_03645 PF03471 Transporter associated domain LPH61_03645 PF00571 CBS domain LPH61_03675 PF04829 Pre-toxin domain with VENN motif LPH61_03675 PF05860 haemagglutination activity domain LPH61_03675 PF13332 Hemagglutinin repeat LPH61_03680 PF04829 Pre-toxin domain with VENN motif LPH61_03680 PF05860 haemagglutination activity domain LPH61_03680 PF13332 Hemagglutinin repeat LPH61_03680 PF13018 Extended Signal Peptide of Type V secretion system LPH61_03685 PF08479 POTRA domain, ShlB-type LPH61_03685 PF17287 POTRA domain LPH61_03685 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB LPH61_03695 PF00521 DNA gyrase/topoisomerase IV, subunit A LPH61_03695 PF03989 DNA gyrase C-terminal domain, beta-propeller LPH61_03700 PF01008 Initiation factor 2 subunit family LPH61_03710 PF00152 tRNA synthetases class II (D, K and N) LPH61_03715 PF00583 Acetyltransferase (GNAT) family LPH61_03720 PF12826 Helix-hairpin-helix motif LPH61_03720 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LPH61_03720 PF00533 BRCA1 C Terminus (BRCT) domain LPH61_03720 PF01653 NAD-dependent DNA ligase adenylation domain LPH61_03720 PF03120 NAD-dependent DNA ligase OB-fold domain LPH61_03730 PF04354 ZipA, C-terminal FtsZ-binding domain LPH61_03735 PF02463 RecF/RecN/SMC N terminal domain LPH61_03740 PF01281 Ribosomal protein L9, N-terminal domain LPH61_03740 PF03948 Ribosomal protein L9, C-terminal domain LPH61_03745 PF01084 Ribosomal protein S18 LPH61_03750 PF01250 Ribosomal protein S6 LPH61_03755 PF01521 Iron-sulphur cluster biosynthesis LPH61_03760 PF01336 OB-fold nucleic acid binding domain LPH61_03760 PF00152 tRNA synthetases class II (D, K and N) LPH61_03765 PF01061 ABC-2 type transporter LPH61_03770 PF00005 ABC transporter LPH61_03780 PF01180 Dihydroorotate dehydrogenase LPH61_03785 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LPH61_03785 PF01565 FAD binding domain LPH61_03790 PF00892 EamA-like transporter family LPH61_03795 PF01569 PAP2 superfamily LPH61_03800 PF04551 GcpE protein LPH61_03810 PF00072 Response regulator receiver domain LPH61_03815 PF00889 Elongation factor TS LPH61_03820 PF00318 Ribosomal protein S2 LPH61_03835 PF00005 ABC transporter LPH61_03835 PF00664 ABC transporter transmembrane region LPH61_03855 PF02321 Outer membrane efflux protein LPH61_03860 PF12850 Calcineurin-like phosphoesterase superfamily domain LPH61_03865 PF02541 Ppx/GppA phosphatase family LPH61_03870 PF13089 Polyphosphate kinase N-terminal domain LPH61_03870 PF17941 Polyphosphate kinase C-terminal domain 1 LPH61_03870 PF13090 Polyphosphate kinase C-terminal domain 2 LPH61_03870 PF02503 Polyphosphate kinase middle domain LPH61_03875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH61_03875 PF00512 His Kinase A (phospho-acceptor) domain LPH61_03875 PF11808 Phosphate regulon sensor protein PhoR LPH61_03875 PF00989 PAS fold LPH61_03880 PF00072 Response regulator receiver domain LPH61_03880 PF00486 Transcriptional regulatory protein, C terminal LPH61_03885 PF13181 Tetratricopeptide repeat LPH61_03885 PF01435 Peptidase family M48 LPH61_03890 PF00462 Glutaredoxin LPH61_03895 PF00180 Isocitrate/isopropylmalate dehydrogenase LPH61_03905 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LPH61_03905 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LPH61_03915 PF11953 Domain of unknown function (DUF3470) LPH61_03915 PF00037 4Fe-4S binding domain LPH61_03925 PF01106 NifU-like domain LPH61_03930 PF01329 Pterin 4 alpha carbinolamine dehydratase LPH61_03945 PF01479 S4 domain LPH61_03945 PF00849 RNA pseudouridylate synthase LPH61_03950 PF12111 Polyribonucleotide phosphorylase C terminal LPH61_03950 PF00575 S1 RNA binding domain LPH61_03950 PF10150 Ribonuclease E/G family LPH61_03955 PF00072 Response regulator receiver domain LPH61_03955 PF00196 Bacterial regulatory proteins, luxR family LPH61_03960 PF17773 UPF0176 acylphosphatase like domain LPH61_03970 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LPH61_03970 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LPH61_03975 PF00545 ribonuclease LPH61_03985 PF12848 ABC transporter LPH61_03985 PF16326 ABC transporter C-terminal domain LPH61_03985 PF00005 ABC transporter LPH61_03990 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LPH61_03995 PF00313 'Cold-shock' DNA-binding domain LPH61_04005 PF01435 Peptidase family M48 LPH61_04010 PF03143 Elongation factor Tu C-terminal domain LPH61_04010 PF03144 Elongation factor Tu domain 2 LPH61_04010 PF00009 Elongation factor Tu GTP binding domain LPH61_04015 PF03144 Elongation factor Tu domain 2 LPH61_04015 PF00009 Elongation factor Tu GTP binding domain LPH61_04015 PF03764 Elongation factor G, domain IV LPH61_04015 PF14492 Elongation Factor G, domain II LPH61_04015 PF00679 Elongation factor G C-terminus LPH61_04020 PF00177 Ribosomal protein S7p/S5e LPH61_04025 PF00164 Ribosomal protein S12/S23 LPH61_04030 PF04983 RNA polymerase Rpb1, domain 3 LPH61_04030 PF05000 RNA polymerase Rpb1, domain 4 LPH61_04030 PF04998 RNA polymerase Rpb1, domain 5 LPH61_04030 PF00623 RNA polymerase Rpb1, domain 2 LPH61_04030 PF04997 RNA polymerase Rpb1, domain 1 LPH61_04035 PF04563 RNA polymerase beta subunit LPH61_04035 PF04560 RNA polymerase Rpb2, domain 7 LPH61_04035 PF00562 RNA polymerase Rpb2, domain 6 LPH61_04035 PF10385 RNA polymerase beta subunit external 1 domain LPH61_04035 PF04561 RNA polymerase Rpb2, domain 2 LPH61_04035 PF04565 RNA polymerase Rpb2, domain 3 LPH61_04040 PF16320 Ribosomal protein L7/L12 dimerisation domain LPH61_04040 PF00542 Ribosomal protein L7/L12 C-terminal domain LPH61_04045 PF00466 Ribosomal protein L10 LPH61_04050 PF00687 Ribosomal protein L1p/L10e family LPH61_04055 PF03946 Ribosomal protein L11, N-terminal domain LPH61_04055 PF00298 Ribosomal protein L11, RNA binding domain LPH61_04060 PF02357 Transcription termination factor nusG LPH61_04060 PF00467 KOW motif LPH61_04065 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LPH61_04075 PF03144 Elongation factor Tu domain 2 LPH61_04075 PF00009 Elongation factor Tu GTP binding domain LPH61_04075 PF03143 Elongation factor Tu C-terminal domain LPH61_04095 PF01926 50S ribosome-binding GTPase LPH61_04095 PF06071 Protein of unknown function (DUF933) LPH61_04100 PF01195 Peptidyl-tRNA hydrolase LPH61_04105 PF14693 Ribosomal protein TL5, C-terminal domain LPH61_04105 PF01386 Ribosomal L25p family LPH61_04110 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LPH61_04110 PF14572 Phosphoribosyl synthetase-associated domain LPH61_04120 PF00288 GHMP kinases N terminal domain LPH61_04120 PF08544 GHMP kinases C terminal LPH61_04125 PF03550 Outer membrane lipoprotein LolB LPH61_04135 PF01488 Shikimate / quinate 5-dehydrogenase LPH61_04135 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LPH61_04135 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LPH61_04140 PF00472 RF-1 domain LPH61_04140 PF03462 PCRF domain LPH61_04150 PF10672 S-adenosylmethionine-dependent methyltransferase LPH61_04150 PF01170 Putative RNA methylase family UPF0020 LPH61_04150 PF02926 THUMP domain LPH61_04210 PF00497 Bacterial extracellular solute-binding proteins, family 3 LPH61_04215 PF00528 Binding-protein-dependent transport system inner membrane component LPH61_04220 PF00005 ABC transporter LPH61_04225 PF00528 Binding-protein-dependent transport system inner membrane component LPH61_04230 PF12705 PD-(D/E)XK nuclease superfamily LPH61_04230 PF00580 UvrD/REP helicase N-terminal domain LPH61_04230 PF13361 UvrD-like helicase C-terminal domain LPH61_04240 PF01914 MarC family integral membrane protein LPH61_04245 PF00462 Glutaredoxin LPH61_04250 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LPH61_04250 PF02222 ATP-grasp domain LPH61_04255 PF00731 AIR carboxylase LPH61_04275 PF07731 Multicopper oxidase LPH61_04275 PF07732 Multicopper oxidase LPH61_04285 PF00580 UvrD/REP helicase N-terminal domain LPH61_04285 PF13361 UvrD-like helicase C-terminal domain LPH61_04295 PF04349 Periplasmic glucan biosynthesis protein, MdoG LPH61_04300 PF01343 Peptidase family S49 LPH61_04305 PF01554 MatE LPH61_04320 PF00270 DEAD/DEAH box helicase LPH61_04320 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LPH61_04320 PF18074 Primosomal protein N C-terminal domain LPH61_04320 PF17764 3′ DNA-binding domain (3′BD) LPH61_04320 PF00271 Helicase conserved C-terminal domain LPH61_04325 PF04545 Sigma-70, region 4 LPH61_04325 PF04542 Sigma-70 region 2 LPH61_04325 PF00140 Sigma-70 factor, region 1.2 LPH61_04330 PF03167 Uracil DNA glycosylase superfamily LPH61_04335 PF00072 Response regulator receiver domain LPH61_04335 PF01339 CheB methylesterase LPH61_04340 PF18075 FtsX extracellular domain LPH61_04345 PF00005 ABC transporter LPH61_04350 PF12300 ATP-dependent RNA helicase RhlB LPH61_04350 PF00271 Helicase conserved C-terminal domain LPH61_04350 PF00270 DEAD/DEAH box helicase LPH61_04355 PF00085 Thioredoxin LPH61_04360 PF07498 Rho termination factor, N-terminal domain LPH61_04360 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LPH61_04360 PF07497 Rho termination factor, RNA-binding domain LPH61_04365 PF03971 Monomeric isocitrate dehydrogenase LPH61_04370 PF09704 CRISPR-associated protein (Cas_Cas5) LPH61_04385 PF13180 PDZ domain LPH61_04385 PF03572 Peptidase family S41 LPH61_04390 PF01551 Peptidase family M23 LPH61_04400 PF00150 Cellulase (glycosyl hydrolase family 5) LPH61_04420 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPH61_04420 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LPH61_04425 PF01645 Conserved region in glutamate synthase LPH61_04425 PF04898 Glutamate synthase central domain LPH61_04425 PF00310 Glutamine amidotransferases class-II LPH61_04425 PF01493 GXGXG motif LPH61_04435 PF14748 Pyrroline-5-carboxylate reductase dimerisation LPH61_04435 PF03807 NADP oxidoreductase coenzyme F420-dependent LPH61_04520 PF13332 Hemagglutinin repeat LPH61_04520 PF04829 Pre-toxin domain with VENN motif LPH61_04520 PF05860 haemagglutination activity domain LPH61_04525 PF13018 Extended Signal Peptide of Type V secretion system LPH61_04525 PF13332 Hemagglutinin repeat LPH61_04525 PF05860 haemagglutination activity domain LPH61_04525 PF04829 Pre-toxin domain with VENN motif LPH61_04565 PF18766 SWI2/SNF2 ATPase LPH61_04565 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LPH61_04565 PF12008 Type I restriction and modification enzyme - subunit R C terminal LPH61_04570 PF01420 Type I restriction modification DNA specificity domain LPH61_04580 PF02384 N-6 DNA Methylase LPH61_04580 PF12161 HsdM N-terminal domain LPH61_04660 PF18766 SWI2/SNF2 ATPase LPH61_04660 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LPH61_04660 PF11867 Domain of unknown function (DUF3387) LPH61_04665 PF01420 Type I restriction modification DNA specificity domain LPH61_04670 PF02384 N-6 DNA Methylase LPH61_04675 PF02384 N-6 DNA Methylase LPH61_04790 PF01638 HxlR-like helix-turn-helix LPH61_04795 PF00106 short chain dehydrogenase LPH61_04815 PF00912 Transglycosylase LPH61_04815 PF00905 Penicillin binding protein transpeptidase domain LPH61_04815 PF14814 Bifunctional transglycosylase second domain LPH61_04825 PF13307 Helicase C-terminal domain LPH61_04825 PF04851 Type III restriction enzyme, res subunit LPH61_04835 PF00484 Carbonic anhydrase LPH61_04840 PF00534 Glycosyl transferases group 1 LPH61_04845 PF01522 Polysaccharide deacetylase LPH61_04855 PF09383 NIL domain LPH61_04855 PF00005 ABC transporter LPH61_04860 PF00528 Binding-protein-dependent transport system inner membrane component LPH61_04865 PF03180 NLPA lipoprotein LPH61_04880 PF02817 e3 binding domain LPH61_04880 PF00364 Biotin-requiring enzyme LPH61_04880 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LPH61_04885 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LPH61_04885 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPH61_04895 PF01545 Cation efflux family LPH61_04905 PF01053 Cys/Met metabolism PLP-dependent enzyme LPH61_04910 PF00561 alpha/beta hydrolase fold LPH61_04915 PF01551 Peptidase family M23 LPH61_04920 PF01975 Survival protein SurE LPH61_04935 PF01476 LysM domain LPH61_04935 PF01551 Peptidase family M23 LPH61_04950 PF00842 Alanine racemase, C-terminal domain LPH61_04950 PF01168 Alanine racemase, N-terminal domain LPH61_04955 PF01266 FAD dependent oxidoreductase LPH61_04965 PF01641 SelR domain LPH61_04975 PF00728 Glycosyl hydrolase family 20, catalytic domain LPH61_04975 PF02838 Glycosyl hydrolase family 20, domain 2 LPH61_04975 PF07691 PA14 domain LPH61_04985 PF07691 PA14 domain LPH61_04985 PF14310 Fibronectin type III-like domain LPH61_04985 PF00933 Glycosyl hydrolase family 3 N terminal domain LPH61_04985 PF01915 Glycosyl hydrolase family 3 C-terminal domain LPH61_05000 PF07971 Glycosyl hydrolase family 92 LPH61_05000 PF17678 Glycosyl hydrolase family 92 N-terminal domain LPH61_05005 PF01301 Glycosyl hydrolases family 35 LPH61_05010 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LPH61_05015 PF00639 PPIC-type PPIASE domain LPH61_05015 PF09312 SurA N-terminal domain LPH61_05020 PF04453 LPS transport system D LPH61_05030 PF01494 FAD binding domain LPH61_05035 PF01494 FAD binding domain LPH61_05040 PF06719 AraC-type transcriptional regulator N-terminus LPH61_05040 PF12833 Helix-turn-helix domain LPH61_05045 PF02525 Flavodoxin-like fold LPH61_05055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH61_05055 PF03466 LysR substrate binding domain LPH61_05060 PF10414 Sirohaem synthase dimerisation region LPH61_05060 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LPH61_05060 PF14824 Sirohaem biosynthesis protein central LPH61_05065 PF00291 Pyridoxal-phosphate dependent enzyme LPH61_05075 PF00274 Fructose-bisphosphate aldolase class-I LPH61_05090 PF02887 Pyruvate kinase, alpha/beta domain LPH61_05090 PF00224 Pyruvate kinase, barrel domain LPH61_05095 PF00162 Phosphoglycerate kinase LPH61_05110 PF00749 tRNA synthetases class I (E and Q), catalytic domain LPH61_05115 PF01475 Ferric uptake regulator family LPH61_05130 PF00150 Cellulase (glycosyl hydrolase family 5) LPH61_05130 PF00553 Cellulose binding domain LPH61_05140 PF05193 Peptidase M16 inactive domain LPH61_05140 PF00675 Insulinase (Peptidase family M16) LPH61_05155 PF03330 Lytic transglycolase LPH61_05160 PF07516 SecA Wing and Scaffold domain LPH61_05160 PF01043 SecA preprotein cross-linking domain LPH61_05160 PF07517 SecA DEAD-like domain LPH61_05160 PF02810 SEC-C motif LPH61_05165 PF01551 Peptidase family M23 LPH61_05165 PF08525 Opacity-associated protein A N-terminal motif LPH61_05165 PF01476 LysM domain LPH61_05175 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LPH61_05180 PF00091 Tubulin/FtsZ family, GTPase domain LPH61_05180 PF12327 FtsZ family, C-terminal domain LPH61_05185 PF02491 SHS2 domain inserted in FTSA LPH61_05190 PF08478 POTRA domain, FtsQ-type LPH61_05190 PF03799 Cell division protein FtsQ LPH61_05195 PF07478 D-ala D-ala ligase C-terminus LPH61_05200 PF08245 Mur ligase middle domain LPH61_05200 PF02875 Mur ligase family, glutamate ligase domain LPH61_05200 PF01225 Mur ligase family, catalytic domain LPH61_05205 PF03033 Glycosyltransferase family 28 N-terminal domain LPH61_05205 PF04101 Glycosyltransferase family 28 C-terminal domain LPH61_05210 PF01098 Cell cycle protein LPH61_05215 PF00953 Glycosyl transferase family 4 LPH61_05220 PF02875 Mur ligase family, glutamate ligase domain LPH61_05220 PF08245 Mur ligase middle domain LPH61_05220 PF01225 Mur ligase family, catalytic domain LPH61_05225 PF01225 Mur ligase family, catalytic domain LPH61_05225 PF02875 Mur ligase family, glutamate ligase domain LPH61_05225 PF08245 Mur ligase middle domain LPH61_05230 PF00905 Penicillin binding protein transpeptidase domain LPH61_05230 PF03717 Penicillin-binding Protein dimerisation domain LPH61_05235 PF04999 Cell division protein FtsL LPH61_05240 PF01795 MraW methylase family LPH61_05245 PF02381 MraZ protein, putative antitoxin-like LPH61_05250 PF02080 TrkA-C domain LPH61_05250 PF03600 Citrate transporter LPH61_05255 PF02390 Putative methyltransferase LPH61_05260 PF05690 Thiazole biosynthesis protein ThiG LPH61_05270 PF00657 GDSL-like Lipase/Acylhydrolase LPH61_05270 PF03797 Autotransporter beta-domain LPH61_05300 PF07977 FabA-like domain LPH61_05325 PF00692 dUTPase LPH61_05335 PF08676 MutL C terminal dimerisation domain LPH61_05335 PF01119 DNA mismatch repair protein, C-terminal domain LPH61_05340 PF01520 N-acetylmuramoyl-L-alanine amidase LPH61_05340 PF11741 AMIN domain LPH61_05345 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LPH61_05350 PF01256 Carbohydrate kinase LPH61_05350 PF03853 YjeF-related protein N-terminus LPH61_05355 PF13742 OB-fold nucleic acid binding domain LPH61_05355 PF02601 Exonuclease VII, large subunit LPH61_05370 PF00570 HRDC domain LPH61_05370 PF01612 3'-5' exonuclease LPH61_05400 PF00216 Bacterial DNA-binding protein LPH61_05405 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LPH61_05405 PF01588 Putative tRNA binding domain LPH61_05405 PF03147 Ferredoxin-fold anticodon binding domain LPH61_05405 PF03484 tRNA synthetase B5 domain LPH61_05405 PF03483 B3/4 domain LPH61_05410 PF01409 tRNA synthetases class II core domain (F) LPH61_05410 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LPH61_05415 PF00453 Ribosomal protein L20 LPH61_05420 PF01632 Ribosomal protein L35 LPH61_05425 PF05198 Translation initiation factor IF-3, N-terminal domain LPH61_05425 PF00707 Translation initiation factor IF-3, C-terminal domain LPH61_05430 PF03129 Anticodon binding domain LPH61_05430 PF02824 TGS domain LPH61_05430 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LPH61_05430 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LPH61_05445 PF18030 RimK PreATP-grasp domain LPH61_05445 PF08443 RimK-like ATP-grasp domain LPH61_05450 PF00486 Transcriptional regulatory protein, C terminal LPH61_05450 PF00072 Response regulator receiver domain LPH61_05455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH61_05455 PF00512 His Kinase A (phospho-acceptor) domain LPH61_05455 PF00989 PAS fold LPH61_05455 PF11808 Phosphate regulon sensor protein PhoR LPH61_05460 PF01121 Dephospho-CoA kinase LPH61_05465 PF01478 Type IV leader peptidase family LPH61_05465 PF06750 Bacterial Peptidase A24 N-terminal domain LPH61_05470 PF00482 Type II secretion system (T2SS), protein F LPH61_05475 PF07963 Prokaryotic N-terminal methylation motif LPH61_05475 PF00114 Pilin (bacterial filament) LPH61_05490 PF07963 Prokaryotic N-terminal methylation motif LPH61_05490 PF00114 Pilin (bacterial filament) LPH61_05495 PF07963 Prokaryotic N-terminal methylation motif LPH61_05495 PF00114 Pilin (bacterial filament) LPH61_05505 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LPH61_05505 PF00437 Type II/IV secretion system protein LPH61_05510 PF00072 Response regulator receiver domain LPH61_05510 PF02954 Bacterial regulatory protein, Fis family LPH61_05510 PF00158 Sigma-54 interaction domain LPH61_05515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH61_05515 PF00512 His Kinase A (phospho-acceptor) domain LPH61_05520 PF00549 CoA-ligase LPH61_05520 PF08442 ATP-grasp domain LPH61_05525 PF00549 CoA-ligase LPH61_05525 PF02629 CoA binding domain LPH61_05530 PF12631 MnmE helical domain LPH61_05530 PF01926 50S ribosome-binding GTPase LPH61_05530 PF10396 GTP-binding protein TrmE N-terminus LPH61_05540 PF14849 YidC periplasmic domain LPH61_05540 PF02096 60Kd inner membrane protein LPH61_05545 PF00825 Ribonuclease P LPH61_05550 PF00468 Ribosomal protein L34 LPH61_05555 PF08299 Bacterial dnaA protein helix-turn-helix LPH61_05555 PF00308 Bacterial dnaA protein LPH61_05555 PF11638 DnaA N-terminal domain LPH61_05560 PF00712 DNA polymerase III beta subunit, N-terminal domain LPH61_05560 PF02768 DNA polymerase III beta subunit, C-terminal domain LPH61_05560 PF02767 DNA polymerase III beta subunit, central domain LPH61_05565 PF02463 RecF/RecN/SMC N terminal domain LPH61_05570 PF00986 DNA gyrase B subunit, carboxyl terminus LPH61_05570 PF01751 Toprim domain LPH61_05570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH61_05570 PF00204 DNA gyrase B LPH61_05570 PF18053 DNA gyrase B subunit insert domain LPH61_05580 PF01435 Peptidase family M48 LPH61_05590 PF03544 Gram-negative bacterial TonB protein C-terminal LPH61_05595 PF01618 MotA/TolQ/ExbB proton channel family LPH61_05600 PF02472 Biopolymer transport protein ExbD/TolR LPH61_05605 PF02472 Biopolymer transport protein ExbD/TolR LPH61_05625 PF01218 Coproporphyrinogen III oxidase LPH61_05650 PF00793 DAHP synthetase I family LPH61_05655 PF07963 Prokaryotic N-terminal methylation motif LPH61_05655 PF00114 Pilin (bacterial filament) LPH61_05675 PF05567 Neisseria PilC beta-propeller domain LPH61_05680 PF00114 Pilin (bacterial filament) LPH61_05680 PF07963 Prokaryotic N-terminal methylation motif LPH61_05685 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LPH61_05690 PF00155 Aminotransferase class I and II LPH61_05695 PF01741 Large-conductance mechanosensitive channel, MscL LPH61_05720 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ LPH61_05730 PF02559 CarD-like/TRCF domain LPH61_05730 PF00270 DEAD/DEAH box helicase LPH61_05730 PF00271 Helicase conserved C-terminal domain LPH61_05730 PF03461 TRCF domain LPH61_05730 PF17757 UvrB interaction domain LPH61_05735 PF01220 Dehydroquinase class II LPH61_05740 PF00364 Biotin-requiring enzyme LPH61_05745 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LPH61_05745 PF00289 Biotin carboxylase, N-terminal domain LPH61_05745 PF02785 Biotin carboxylase C-terminal domain LPH61_05750 PF13361 UvrD-like helicase C-terminal domain LPH61_05750 PF00580 UvrD/REP helicase N-terminal domain LPH61_05760 PF00042 Globin LPH61_05760 PF00175 Oxidoreductase NAD-binding domain LPH61_05760 PF00970 Oxidoreductase FAD-binding domain LPH61_05770 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ LPH61_05780 PF02195 ParB-like nuclease domain LPH61_05780 PF06613 KorB C-terminal beta-barrel domain LPH61_05780 PF08535 KorB domain LPH61_05795 PF04055 Radical SAM superfamily LPH61_05795 PF06968 Biotin and Thiamin Synthesis associated domain LPH61_05800 PF01734 Patatin-like phospholipase LPH61_05805 PF01040 UbiA prenyltransferase family LPH61_05820 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family LPH61_05855 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LPH61_05855 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LPH61_05865 PF02978 Signal peptide binding domain LPH61_05865 PF02881 SRP54-type protein, helical bundle domain LPH61_05865 PF00448 SRP54-type protein, GTPase domain LPH61_05885 PF13954 PapC N-terminal domain LPH61_05885 PF13953 PapC C-terminal domain LPH61_05885 PF00577 Outer membrane usher protein LPH61_05890 PF02753 Pili assembly chaperone PapD, C-terminal domain LPH61_05890 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LPH61_05895 PF16970 Type-1 fimbrial protein, A LPH61_05900 PF02464 Competence-damaged protein LPH61_05905 PF00083 Sugar (and other) transporter LPH61_05910 PF01926 50S ribosome-binding GTPase LPH61_05910 PF13167 GTP-binding GTPase N-terminal LPH61_05910 PF16360 GTP-binding GTPase Middle Region LPH61_05915 PF17209 Hfq protein LPH61_05925 PF00809 Pterin binding enzyme LPH61_05930 PF01434 Peptidase family M41 LPH61_05930 PF00004 ATPase family associated with various cellular activities (AAA) LPH61_05930 PF17862 AAA+ lid domain LPH61_05930 PF06480 FtsH Extracellular LPH61_05935 PF01728 FtsJ-like methyltransferase LPH61_05940 PF01985 CRS1 / YhbY (CRM) domain LPH61_05955 PF00920 Dehydratase family LPH61_05985 PF03279 Bacterial lipid A biosynthesis acyltransferase LPH61_05990 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) LPH61_06010 PF00886 Ribosomal protein S16 LPH61_06015 PF01782 RimM N-terminal domain LPH61_06015 PF05239 PRC-barrel domain LPH61_06020 PF01746 tRNA (Guanine-1)-methyltransferase LPH61_06025 PF01245 Ribosomal protein L19 LPH61_06030 PF00557 Metallopeptidase family M24 LPH61_06040 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal LPH61_06040 PF14602 Hexapeptide repeat of succinyl-transferase LPH61_06040 PF00132 Bacterial transferase hexapeptide (six repeats) LPH61_06045 PF03960 ArsC family LPH61_06050 PF01546 Peptidase family M20/M25/M40 LPH61_06050 PF07687 Peptidase dimerisation domain LPH61_06055 PF13537 Glutamine amidotransferase domain LPH61_06055 PF00733 Asparagine synthase LPH61_06070 PF03060 Nitronate monooxygenase LPH61_06080 PF01726 LexA DNA binding domain LPH61_06080 PF00717 Peptidase S24-like LPH61_06085 PF00154 recA bacterial DNA recombination protein LPH61_06090 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LPH61_06090 PF02272 DHHA1 domain LPH61_06090 PF01411 tRNA synthetases class II (A) LPH61_06095 PF02599 Global regulator protein family LPH61_06105 PF01432 Peptidase family M3 LPH61_06120 PF07731 Multicopper oxidase LPH61_06120 PF07732 Multicopper oxidase LPH61_06120 PF00394 Multicopper oxidase LPH61_06125 PF05275 Copper resistance protein B precursor (CopB) LPH61_06130 PF00133 tRNA synthetases class I (I, L, M and V) LPH61_06130 PF10458 Valyl tRNA synthetase tRNA binding arm LPH61_06130 PF08264 Anticodon-binding domain of tRNA LPH61_06150 PF02789 Cytosol aminopeptidase family, N-terminal domain LPH61_06150 PF00883 Cytosol aminopeptidase family, catalytic domain LPH61_06170 PF01380 SIS domain LPH61_06185 PF17284 Spermidine synthase tetramerisation domain LPH61_06190 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LPH61_06190 PF17944 Arginine decarboxylase C-terminal helical extension LPH61_06190 PF17810 Arginine decarboxylase helical bundle domain LPH61_06195 PF00106 short chain dehydrogenase LPH61_06205 PF00750 tRNA synthetases class I (R) LPH61_06205 PF03485 Arginyl tRNA synthetase N terminal domain LPH61_06205 PF05746 DALR anticodon binding domain LPH61_06210 PF04002 RadC-like JAB domain LPH61_06215 PF04127 DNA / pantothenate metabolism flavoprotein LPH61_06215 PF02441 Flavoprotein LPH61_06220 PF00692 dUTPase LPH61_06225 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LPH61_06225 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LPH61_06225 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LPH61_06225 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LPH61_06235 PF00156 Phosphoribosyl transferase domain LPH61_06290 PF07690 Major Facilitator Superfamily LPH61_06295 PF03702 Anhydro-N-acetylmuramic acid kinase LPH61_06300 PF04225 Opacity-associated protein A LysM-like domain LPH61_06300 PF01551 Peptidase family M23 LPH61_06305 PF00579 tRNA synthetases class I (W and Y) LPH61_06335 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LPH61_06335 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LPH61_06365 PF00009 Elongation factor Tu GTP binding domain LPH61_06365 PF16658 Class II release factor RF3, C-terminal domain LPH61_06370 PF03006 Haemolysin-III related LPH61_06375 PF00535 Glycosyl transferase family 2 LPH61_06380 PF01026 TatD related DNase LPH61_06395 PF01597 Glycine cleavage H-protein LPH61_06400 PF01571 Aminomethyltransferase folate-binding domain LPH61_06400 PF08669 Glycine cleavage T-protein C-terminal barrel domain LPH61_06410 PF01145 SPFH domain / Band 7 family LPH61_06410 PF16200 C-terminal region of band_7 LPH61_06415 PF03819 MazG nucleotide pyrophosphohydrolase domain LPH61_06420 PF00459 Inositol monophosphatase family LPH61_06425 PF00293 NUDIX domain LPH61_06430 PF00202 Aminotransferase class-III LPH61_06435 PF04452 RNA methyltransferase LPH61_06445 PF00270 DEAD/DEAH box helicase LPH61_06445 PF00271 Helicase conserved C-terminal domain LPH61_06450 PF01242 6-pyruvoyl tetrahydropterin synthase LPH61_06475 PF03653 Uncharacterised protein family (UPF0093) LPH61_06480 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LPH61_06485 PF01336 OB-fold nucleic acid binding domain LPH61_06485 PF14579 Helix-hairpin-helix motif LPH61_06485 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LPH61_06485 PF07733 Bacterial DNA polymerase III alpha NTPase domain LPH61_06485 PF02811 PHP domain LPH61_06490 PF01259 SAICAR synthetase LPH61_06495 PF00226 DnaJ domain LPH61_06495 PF05099 Tellurite resistance protein TerB LPH61_06500 PF00834 Ribulose-phosphate 3 epimerase family LPH61_06510 PF04715 Anthranilate synthase component I, N terminal region LPH61_06510 PF00425 chorismate binding enzyme LPH61_06515 PF00117 Glutamine amidotransferase class-I LPH61_06520 PF02885 Glycosyl transferase family, helical bundle domain LPH61_06520 PF00591 Glycosyl transferase family, a/b domain LPH61_06525 PF00218 Indole-3-glycerol phosphate synthase LPH61_06540 PF12849 PBP superfamily domain LPH61_06560 PF01321 Creatinase/Prolidase N-terminal domain LPH61_06560 PF00557 Metallopeptidase family M24 LPH61_06575 PF01702 Queuine tRNA-ribosyltransferase LPH61_06580 PF02699 Preprotein translocase subunit LPH61_06585 PF02355 Protein export membrane protein LPH61_06585 PF13721 SecD export protein N-terminal TM region LPH61_06585 PF07549 SecD/SecF GG Motif LPH61_06590 PF07549 SecD/SecF GG Motif LPH61_06590 PF02355 Protein export membrane protein LPH61_06600 PF12627 Probable RNA and SrmB- binding site of polymerase A LPH61_06600 PF12626 Polymerase A arginine-rich C-terminus LPH61_06600 PF01743 Poly A polymerase head domain LPH61_06605 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LPH61_06610 PF02548 Ketopantoate hydroxymethyltransferase LPH61_06615 PF02569 Pantoate-beta-alanine ligase LPH61_06620 PF02261 Aspartate decarboxylase LPH61_06625 PF00342 Phosphoglucose isomerase LPH61_06635 PF17384 RimP C-terminal SH3 domain LPH61_06635 PF02576 RimP N-terminal domain LPH61_06640 PF13184 NusA-like KH domain LPH61_06640 PF08529 NusA N-terminal domain LPH61_06640 PF00575 S1 RNA binding domain LPH61_06645 PF04760 Translation initiation factor IF-2, N-terminal region LPH61_06645 PF08364 Bacterial translation initiation factor IF-2 associated region LPH61_06645 PF00009 Elongation factor Tu GTP binding domain LPH61_06645 PF11987 Translation-initiation factor 2 LPH61_06650 PF02033 Ribosome-binding factor A LPH61_06655 PF01509 TruB family pseudouridylate synthase (N terminal domain) LPH61_06655 PF16198 tRNA pseudouridylate synthase B C-terminal domain LPH61_06655 PF09157 Pseudouridine synthase II TruB, C-terminal LPH61_06660 PF00312 Ribosomal protein S15 LPH61_06665 PF00575 S1 RNA binding domain LPH61_06665 PF03725 3' exoribonuclease family, domain 2 LPH61_06665 PF01138 3' exoribonuclease family, domain 1 LPH61_06665 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LPH61_06665 PF00013 KH domain LPH61_06670 PF01638 HxlR-like helix-turn-helix LPH61_06675 PF05368 NmrA-like family LPH61_06680 PF00873 AcrB/AcrD/AcrF family LPH61_06690 PF00999 Sodium/hydrogen exchanger family LPH61_06710 PF03880 DbpA RNA binding domain LPH61_06710 PF00270 DEAD/DEAH box helicase LPH61_06710 PF00271 Helicase conserved C-terminal domain LPH61_06715 PF01012 Electron transfer flavoprotein domain LPH61_06715 PF00766 Electron transfer flavoprotein FAD-binding domain LPH61_06720 PF01012 Electron transfer flavoprotein domain LPH61_06725 PF16363 GDP-mannose 4,6 dehydratase LPH61_06730 PF00483 Nucleotidyl transferase LPH61_06735 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LPH61_06740 PF04321 RmlD substrate binding domain LPH61_06745 PF01050 Mannose-6-phosphate isomerase LPH61_06745 PF00483 Nucleotidyl transferase LPH61_06750 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LPH61_06750 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LPH61_06750 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LPH61_06750 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LPH61_06795 PF03797 Autotransporter beta-domain LPH61_06795 PF12951 Passenger-associated-transport-repeat LPH61_06795 PF00082 Subtilase family LPH61_06800 PF03797 Autotransporter beta-domain LPH61_06800 PF12951 Passenger-associated-transport-repeat LPH61_06800 PF00082 Subtilase family LPH61_06805 PF06779 Uncharacterised MFS-type transporter YbfB LPH61_06810 PF07669 Eco57I restriction-modification methylase LPH61_06820 PF00365 Phosphofructokinase LPH61_06830 PF01225 Mur ligase family, catalytic domain LPH61_06830 PF02875 Mur ligase family, glutamate ligase domain LPH61_06830 PF08245 Mur ligase middle domain LPH61_06835 PF01569 PAP2 superfamily LPH61_06855 PF00892 EamA-like transporter family LPH61_06860 PF02789 Cytosol aminopeptidase family, N-terminal domain LPH61_06860 PF00883 Cytosol aminopeptidase family, catalytic domain LPH61_06870 PF01594 AI-2E family transporter LPH61_06890 PF00595 PDZ domain LPH61_06895 PF01370 NAD dependent epimerase/dehydratase family LPH61_06895 PF08338 Domain of unknown function (DUF1731) LPH61_06900 PF13193 AMP-binding enzyme C-terminal domain LPH61_06900 PF00501 AMP-binding enzyme LPH61_06905 PF00694 Aconitase C-terminal domain LPH61_06905 PF00330 Aconitase family (aconitate hydratase) LPH61_06920 PF11791 Aconitate B N-terminal domain LPH61_06920 PF06434 Aconitate hydratase 2 N-terminus LPH61_06920 PF00330 Aconitase family (aconitate hydratase) LPH61_06935 PF02384 N-6 DNA Methylase LPH61_06940 PF01420 Type I restriction modification DNA specificity domain LPH61_06955 PF18766 SWI2/SNF2 ATPase LPH61_06955 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LPH61_06955 PF11867 Domain of unknown function (DUF3387) LPH61_06975 PF00121 Triosephosphate isomerase LPH61_06990 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LPH61_06995 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LPH61_07000 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LPH61_07005 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LPH61_07015 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LPH61_07015 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LPH61_07015 PF10531 SLBB domain LPH61_07020 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal LPH61_07020 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LPH61_07020 PF00384 Molybdopterin oxidoreductase LPH61_07025 PF00146 NADH dehydrogenase LPH61_07030 PF12838 4Fe-4S dicluster domain LPH61_07035 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LPH61_07040 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LPH61_07045 PF00361 Proton-conducting membrane transporter LPH61_07045 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LPH61_07050 PF00361 Proton-conducting membrane transporter LPH61_07050 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus LPH61_07055 PF00361 Proton-conducting membrane transporter LPH61_07060 PF00106 short chain dehydrogenase LPH61_07065 PF03600 Citrate transporter LPH61_07075 PF00486 Transcriptional regulatory protein, C terminal LPH61_07075 PF00072 Response regulator receiver domain LPH61_07080 PF00512 His Kinase A (phospho-acceptor) domain LPH61_07080 PF08521 Two-component sensor kinase N-terminal LPH61_07080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH61_07090 PF00196 Bacterial regulatory proteins, luxR family LPH61_07090 PF00072 Response regulator receiver domain LPH61_07095 PF00672 HAMP domain LPH61_07095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH61_07095 PF01627 Hpt domain LPH61_07095 PF00072 Response regulator receiver domain LPH61_07095 PF00512 His Kinase A (phospho-acceptor) domain LPH61_07105 PF00375 Sodium:dicarboxylate symporter family LPH61_07110 PF00390 Malic enzyme, N-terminal domain LPH61_07110 PF03949 Malic enzyme, NAD binding domain LPH61_07110 PF01515 Phosphate acetyl/butaryl transferase LPH61_07115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH61_07115 PF00183 Hsp90 protein LPH61_07125 PF01467 Cytidylyltransferase-like LPH61_07135 PF00037 4Fe-4S binding domain LPH61_07145 PF00990 Diguanylate cyclase, GGDEF domain LPH61_07150 PF01551 Peptidase family M23 LPH61_07150 PF01476 LysM domain LPH61_07155 PF01979 Amidohydrolase family LPH61_07160 PF01809 Putative membrane protein insertion efficiency factor LPH61_07165 PF01258 Prokaryotic dksA/traR C4-type zinc finger LPH61_07195 PF02657 Fe-S metabolism associated domain LPH61_07200 PF01406 tRNA synthetases class I (C) catalytic domain LPH61_07200 PF09190 DALR domain LPH61_07210 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LPH61_07210 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LPH61_07215 PF00764 Arginosuccinate synthase LPH61_07220 PF01546 Peptidase family M20/M25/M40 LPH61_07220 PF07687 Peptidase dimerisation domain LPH61_07225 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase LPH61_07225 PF00696 Amino acid kinase family LPH61_07235 PF01118 Semialdehyde dehydrogenase, NAD binding domain LPH61_07240 PF00206 Lyase LPH61_07250 PF01472 PUA domain LPH61_07250 PF00696 Amino acid kinase family LPH61_07255 PF00171 Aldehyde dehydrogenase family LPH61_07265 PF00239 Resolvase, N terminal domain LPH61_07265 PF02796 Helix-turn-helix domain of resolvase LPH61_07290 PF00239 Resolvase, N terminal domain LPH61_07290 PF02796 Helix-turn-helix domain of resolvase LPH61_07305 PF13700 Domain of unknown function (DUF4158) LPH61_07305 PF01526 Tn3 transposase DDE domain LPH61_07335 PF03524 Conjugal transfer protein LPH61_07375 PF01593 Flavin containing amine oxidoreductase LPH61_07385 PF02627 Carboxymuconolactone decarboxylase family LPH61_07405 PF03466 LysR substrate binding domain LPH61_07405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH61_07410 PF05016 ParE toxin of type II toxin-antitoxin system, parDE LPH61_07415 PF09386 Antitoxin ParD LPH61_07420 PF02796 Helix-turn-helix domain of resolvase LPH61_07420 PF00239 Resolvase, N terminal domain LPH61_07445 PF00239 Resolvase, N terminal domain LPH61_07445 PF02796 Helix-turn-helix domain of resolvase LPH61_07485 PF06594 Haemolysin-type calcium binding protein related domain LPH61_07485 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) LPH61_07490 PF14437 MafB19-like deaminase LPH61_07495 PF01325 Iron dependent repressor, N-terminal DNA binding domain LPH61_07495 PF02742 Iron dependent repressor, metal binding and dimerisation domain LPH61_07500 PF01566 Natural resistance-associated macrophage protein LPH61_07515 PF04376 Arginine-tRNA-protein transferase, N terminus LPH61_07515 PF04377 Arginine-tRNA-protein transferase, C terminus LPH61_07550 PF12951 Passenger-associated-transport-repeat LPH61_07550 PF00082 Subtilase family LPH61_07550 PF03797 Autotransporter beta-domain LPH61_07575 PF01553 Acyltransferase LPH61_07590 PF05221 S-adenosyl-L-homocysteine hydrolase LPH61_07590 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain LPH61_07605 PF01351 Ribonuclease HII LPH61_07610 PF02684 Lipid-A-disaccharide synthetase LPH61_07615 PF00132 Bacterial transferase hexapeptide (six repeats) LPH61_07615 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LPH61_07620 PF07977 FabA-like domain LPH61_07625 PF00132 Bacterial transferase hexapeptide (six repeats) LPH61_07625 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LPH61_07630 PF01103 Surface antigen LPH61_07630 PF07244 Surface antigen variable number repeat LPH61_07635 PF17820 PDZ domain LPH61_07635 PF02163 Peptidase family M50 LPH61_07640 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LPH61_07640 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LPH61_07640 PF13288 DXP reductoisomerase C-terminal domain LPH61_07650 PF01255 Putative undecaprenyl diphosphate synthase LPH61_07655 PF01765 Ribosome recycling factor LPH61_07680 PF04305 Protein of unknown function (DUF455) LPH61_07685 PF00696 Amino acid kinase family LPH61_07755 PF01081 KDPG and KHG aldolase LPH61_07760 PF00920 Dehydratase family LPH61_07765 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LPH61_07770 PF02685 Glucokinase LPH61_07775 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LPH61_07775 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LPH61_07780 PF17912 MalK OB fold domain LPH61_07780 PF00005 ABC transporter LPH61_07795 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LPH61_07800 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LPH61_07805 PF02910 Fumarate reductase flavoprotein C-term LPH61_07805 PF00890 FAD binding domain LPH61_07810 PF13237 4Fe-4S dicluster domain LPH61_07810 PF13085 2Fe-2S iron-sulfur cluster binding domain LPH61_07815 PF03937 Flavinator of succinate dehydrogenase LPH61_07825 PF12704 MacB-like periplasmic core domain LPH61_07825 PF02687 FtsX-like permease family LPH61_07830 PF00005 ABC transporter LPH61_07835 PF00753 Metallo-beta-lactamase superfamily LPH61_07835 PF03772 Competence protein LPH61_07850 PF00005 ABC transporter LPH61_07850 PF00664 ABC transporter transmembrane region LPH61_07855 PF02606 Tetraacyldisaccharide-1-P 4'-kinase LPH61_07860 PF01883 Iron-sulfur cluster assembly protein LPH61_07860 PF10609 NUBPL iron-transfer P-loop NTPase LPH61_07875 PF13091 PLD-like domain LPH61_07900 PF03358 NADPH-dependent FMN reductase LPH61_07905 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LPH61_07905 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LPH61_07920 PF01300 Telomere recombination LPH61_07925 PF01751 Toprim domain LPH61_07925 PF13368 Topoisomerase C-terminal repeat LPH61_07925 PF01131 DNA topoisomerase LPH61_07935 PF04361 Protein of unknown function (DUF494) LPH61_07940 PF17782 DprA winged helix domain LPH61_07940 PF02481 DNA recombination-mediator protein A LPH61_07950 PF01327 Polypeptide deformylase LPH61_07955 PF02911 Formyl transferase, C-terminal domain LPH61_07955 PF00551 Formyl transferase LPH61_07960 PF01189 16S rRNA methyltransferase RsmB/F LPH61_07960 PF01029 NusB family LPH61_07965 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase LPH61_07980 PF07963 Prokaryotic N-terminal methylation motif LPH61_07980 PF00114 Pilin (bacterial filament) LPH61_08100 PF01612 3'-5' exonuclease LPH61_08100 PF00476 DNA polymerase family A LPH61_08100 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LPH61_08100 PF01367 5'-3' exonuclease, C-terminal SAM fold LPH61_08105 PF01113 Dihydrodipicolinate reductase, N-terminus LPH61_08105 PF05173 Dihydrodipicolinate reductase, C-terminus LPH61_08110 PF00117 Glutamine amidotransferase class-I LPH61_08110 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LPH61_08115 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LPH61_08115 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LPH61_08115 PF02142 MGS-like domain LPH61_08120 PF03449 Transcription elongation factor, N-terminal LPH61_08120 PF01272 Transcription elongation factor, GreA/GreB, C-term LPH61_08130 PF17768 RecJ OB domain LPH61_08130 PF02272 DHHA1 domain LPH61_08130 PF01368 DHH family LPH61_08140 PF01336 OB-fold nucleic acid binding domain LPH61_08140 PF00152 tRNA synthetases class II (D, K and N) LPH61_08145 PF00072 Response regulator receiver domain LPH61_08150 PF00072 Response regulator receiver domain LPH61_08150 PF00512 His Kinase A (phospho-acceptor) domain LPH61_08150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH61_08150 PF01627 Hpt domain LPH61_08155 PF00378 Enoyl-CoA hydratase/isomerase LPH61_08160 PF01842 ACT domain LPH61_08160 PF00696 Amino acid kinase family LPH61_08170 PF08245 Mur ligase middle domain LPH61_08190 PF00293 NUDIX domain LPH61_08200 PF02219 Methylenetetrahydrofolate reductase LPH61_08210 PF02545 Maf-like protein LPH61_08215 PF00575 S1 RNA binding domain LPH61_08215 PF10150 Ribonuclease E/G family LPH61_08225 PF01523 Putative modulator of DNA gyrase LPH61_08230 PF04751 Protein of unknown function (DUF615) LPH61_08235 PF01523 Putative modulator of DNA gyrase LPH61_08245 PF17761 DUF1016 N-terminal domain LPH61_08245 PF06250 YhcG PDDEXK nuclease domain LPH61_08275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH61_08275 PF03466 LysR substrate binding domain LPH61_08280 PF03358 NADPH-dependent FMN reductase LPH61_08290 PF08240 Alcohol dehydrogenase GroES-like domain LPH61_08290 PF00107 Zinc-binding dehydrogenase LPH61_08305 PF00248 Aldo/keto reductase family LPH61_08320 PF12804 MobA-like NTP transferase domain LPH61_08320 PF14602 Hexapeptide repeat of succinyl-transferase LPH61_08320 PF00132 Bacterial transferase hexapeptide (six repeats) LPH61_08330 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LPH61_08330 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LPH61_08335 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LPH61_08335 PF02874 ATP synthase alpha/beta family, beta-barrel domain LPH61_08340 PF00231 ATP synthase LPH61_08345 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LPH61_08345 PF00306 ATP synthase alpha/beta chain, C terminal domain LPH61_08345 PF02874 ATP synthase alpha/beta family, beta-barrel domain LPH61_08350 PF00213 ATP synthase delta (OSCP) subunit LPH61_08355 PF00430 ATP synthase B/B' CF(0) LPH61_08360 PF00137 ATP synthase subunit C LPH61_08365 PF00119 ATP synthase A chain LPH61_08375 PF00338 Ribosomal protein S10p/S20e LPH61_08380 PF00297 Ribosomal protein L3 LPH61_08385 PF00573 Ribosomal protein L4/L1 family LPH61_08390 PF00276 Ribosomal protein L23 LPH61_08395 PF00181 Ribosomal Proteins L2, RNA binding domain LPH61_08395 PF03947 Ribosomal Proteins L2, C-terminal domain LPH61_08400 PF00203 Ribosomal protein S19 LPH61_08405 PF00237 Ribosomal protein L22p/L17e LPH61_08410 PF07650 KH domain LPH61_08410 PF00189 Ribosomal protein S3, C-terminal domain LPH61_08415 PF00252 Ribosomal protein L16p/L10e LPH61_08420 PF00831 Ribosomal L29 protein LPH61_08425 PF00366 Ribosomal protein S17 LPH61_08430 PF00238 Ribosomal protein L14p/L23e LPH61_08435 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LPH61_08435 PF00467 KOW motif LPH61_08440 PF00673 ribosomal L5P family C-terminus LPH61_08440 PF00281 Ribosomal protein L5 LPH61_08445 PF00253 Ribosomal protein S14p/S29e LPH61_08450 PF00410 Ribosomal protein S8 LPH61_08455 PF00347 Ribosomal protein L6 LPH61_08460 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LPH61_08465 PF03719 Ribosomal protein S5, C-terminal domain LPH61_08465 PF00333 Ribosomal protein S5, N-terminal domain LPH61_08470 PF00327 Ribosomal protein L30p/L7e LPH61_08475 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LPH61_08480 PF00344 SecY translocase LPH61_08485 PF00416 Ribosomal protein S13/S18 LPH61_08490 PF00411 Ribosomal protein S11 LPH61_08495 PF01479 S4 domain LPH61_08495 PF00163 Ribosomal protein S4/S9 N-terminal domain LPH61_08500 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LPH61_08500 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LPH61_08500 PF01000 RNA polymerase Rpb3/RpoA insert domain LPH61_08505 PF01196 Ribosomal protein L17 LPH61_08510 PF04380 Membrane fusogenic activity LPH61_08515 PF01078 Magnesium chelatase, subunit ChlI LPH61_08515 PF13335 Magnesium chelatase, subunit ChlI C-terminal LPH61_08520 PF00561 alpha/beta hydrolase fold LPH61_08535 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LPH61_08535 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LPH61_08535 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LPH61_08550 PF05697 Bacterial trigger factor protein (TF) LPH61_08550 PF05698 Bacterial trigger factor protein (TF) C-terminus LPH61_08555 PF00574 Clp protease LPH61_08560 PF10431 C-terminal, D2-small domain, of ClpB protein LPH61_08560 PF06689 ClpX C4-type zinc finger LPH61_08560 PF07724 AAA domain (Cdc48 subfamily) LPH61_08565 PF00004 ATPase family associated with various cellular activities (AAA) LPH61_08565 PF02190 ATP-dependent protease La (LON) substrate-binding domain LPH61_08565 PF05362 Lon protease (S16) C-terminal proteolytic domain LPH61_08570 PF00216 Bacterial DNA-binding protein LPH61_08595 PF02867 Ribonucleotide reductase, barrel domain LPH61_08595 PF03477 ATP cone domain LPH61_08595 PF00317 Ribonucleotide reductase, all-alpha domain LPH61_08600 PF00268 Ribonucleotide reductase, small chain LPH61_08625 PF01479 S4 domain LPH61_08625 PF00849 RNA pseudouridylate synthase LPH61_08630 PF13419 Haloacid dehalogenase-like hydrolase LPH61_08640 PF00830 Ribosomal L28 family LPH61_08645 PF00471 Ribosomal protein L33 LPH61_08650 PF13396 Phospholipase_D-nuclease N-terminal LPH61_08650 PF13091 PLD-like domain LPH61_08665 PF00114 Pilin (bacterial filament) LPH61_08665 PF07963 Prokaryotic N-terminal methylation motif LPH61_08685 PF01367 5'-3' exonuclease, C-terminal SAM fold LPH61_08685 PF01612 3'-5' exonuclease LPH61_08685 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LPH61_08685 PF00476 DNA polymerase family A LPH61_08705 PF00959 Phage lysozyme LPH61_08725 PF01555 DNA methylase LPH61_08745 PF00043 Glutathione S-transferase, C-terminal domain LPH61_08745 PF02798 Glutathione S-transferase, N-terminal domain LPH61_08750 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LPH61_08750 PF00056 lactate/malate dehydrogenase, NAD binding domain LPH61_08755 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LPH61_08760 PF00009 Elongation factor Tu GTP binding domain LPH61_08760 PF03144 Elongation factor Tu domain 2 LPH61_08760 PF00679 Elongation factor G C-terminus LPH61_08775 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LPH61_08775 PF00529 HlyD membrane-fusion protein of T1SS LPH61_08800 PF03412 Peptidase C39 family LPH61_08800 PF00664 ABC transporter transmembrane region LPH61_08800 PF00005 ABC transporter LPH61_08805 PF01061 ABC-2 type transporter LPH61_08810 PF00005 ABC transporter LPH61_08815 PF05567 Neisseria PilC beta-propeller domain LPH61_08830 PF08482 ATP-dependent helicase C-terminal LPH61_08830 PF00271 Helicase conserved C-terminal domain LPH61_08830 PF00270 DEAD/DEAH box helicase LPH61_08830 PF04408 Helicase associated domain (HA2) LPH61_08840 PF13185 GAF domain LPH61_08845 PF17243 POTRA domain TamA domain 1 LPH61_08845 PF01103 Surface antigen LPH61_08850 PF04357 TamB, inner membrane protein subunit of TAM complex LPH61_08865 PF00285 Citrate synthase, C-terminal domain LPH61_08870 PF00330 Aconitase family (aconitate hydratase) LPH61_08870 PF00694 Aconitase C-terminal domain LPH61_08875 PF04303 PrpF protein LPH61_08895 PF11974 Bacterial alpha-2-macroglobulin MG3 domain LPH61_08895 PF01835 MG2 domain LPH61_08895 PF17962 Bacterial macroglobulin domain 6 LPH61_08895 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain LPH61_08895 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain LPH61_08895 PF07703 Alpha-2-macroglobulin bait region domain LPH61_08895 PF00207 Alpha-2-macroglobulin family LPH61_08895 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain LPH61_08900 PF02583 Metal-sensitive transcriptional repressor LPH61_08905 PF03824 High-affinity nickel-transport protein LPH61_08910 PF07859 alpha/beta hydrolase fold LPH61_08915 PF12852 Cupin LPH61_08915 PF12833 Helix-turn-helix domain LPH61_08930 PF02868 Thermolysin metallopeptidase, alpha-helical domain LPH61_08930 PF01447 Thermolysin metallopeptidase, catalytic domain LPH61_08930 PF16485 Protealysin propeptide LPH61_08935 PF00929 Exonuclease LPH61_08940 PF00924 Mechanosensitive ion channel LPH61_08940 PF05552 Conserved TM helix LPH61_08945 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LPH61_08945 PF00391 PEP-utilising enzyme, mobile domain LPH61_08945 PF02896 PEP-utilising enzyme, TIM barrel domain LPH61_08950 PF03618 Kinase/pyrophosphorylase LPH61_08970 PF04286 Protein of unknown function (DUF445) LPH61_08985 PF04359 Protein of unknown function (DUF493) LPH61_08990 PF03099 Biotin/lipoate A/B protein ligase family LPH61_08995 PF04055 Radical SAM superfamily LPH61_08995 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family LPH61_09025 PF01595 Cyclin M transmembrane N-terminal domain LPH61_09025 PF03471 Transporter associated domain LPH61_09025 PF00571 CBS domain LPH61_09040 PF00204 DNA gyrase B LPH61_09040 PF00986 DNA gyrase B subunit, carboxyl terminus LPH61_09040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH61_09040 PF01751 Toprim domain LPH61_09050 PF00117 Glutamine amidotransferase class-I LPH61_09050 PF06418 CTP synthase N-terminus LPH61_09055 PF00793 DAHP synthetase I family LPH61_09060 PF03952 Enolase, N-terminal domain LPH61_09060 PF00113 Enolase, C-terminal TIM barrel domain LPH61_09065 PF04977 Septum formation initiator LPH61_09070 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LPH61_09075 PF02542 YgbB family LPH61_09080 PF01713 Smr domain LPH61_09105 PF02470 MlaD protein LPH61_09105 PF03886 ABC-type transport auxiliary lipoprotein component LPH61_09110 PF00005 ABC transporter LPH61_09115 PF02405 Permease MlaE LPH61_09190 PF04093 rod shape-determining protein MreD LPH61_09195 PF03717 Penicillin-binding Protein dimerisation domain LPH61_09195 PF00905 Penicillin binding protein transpeptidase domain LPH61_09200 PF01098 Cell cycle protein LPH61_09205 PF02547 Queuosine biosynthesis protein LPH61_09210 PF02824 TGS domain LPH61_09210 PF04607 Region found in RelA / SpoT proteins LPH61_09210 PF13291 ACT domain LPH61_09225 PF03776 Septum formation topological specificity factor MinE LPH61_09230 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LPH61_09235 PF05209 Septum formation inhibitor MinC, N-terminal domain LPH61_09235 PF03775 Septum formation inhibitor MinC, C-terminal domain LPH61_09255 PF00730 HhH-GPD superfamily base excision DNA repair protein LPH61_09265 PF01292 Prokaryotic cytochrome b561 LPH61_09270 PF04264 YceI-like domain LPH61_09275 PF09308 LuxQ, periplasmic LPH61_09275 PF00072 Response regulator receiver domain LPH61_09275 PF00512 His Kinase A (phospho-acceptor) domain LPH61_09275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH61_09285 PF01208 Uroporphyrinogen decarboxylase (URO-D) LPH61_09290 PF01761 3-dehydroquinate synthase LPH61_09295 PF01202 Shikimate kinase LPH61_09300 PF01243 Pyridoxamine 5'-phosphate oxidase LPH61_09300 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LPH61_09310 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain LPH61_09310 PF00749 tRNA synthetases class I (E and Q), catalytic domain LPH61_09320 PF03932 CutC family LPH61_09340 PF00528 Binding-protein-dependent transport system inner membrane component LPH61_09345 PF00528 Binding-protein-dependent transport system inner membrane component LPH61_09350 PF00005 ABC transporter LPH61_09350 PF12857 TOBE-like domain LPH61_09390 PF01381 Helix-turn-helix LPH61_09465 PF10065 Uncharacterized conserved protein (DUF2303) LPH61_09490 PF04545 Sigma-70, region 4 LPH61_09490 PF04539 Sigma-70 region 3 LPH61_09490 PF04542 Sigma-70 region 2 LPH61_09490 PF00140 Sigma-70 factor, region 1.2 LPH61_09490 PF03979 Sigma-70 factor, region 1.1 LPH61_09490 PF04546 Sigma-70, non-essential region LPH61_09500 PF03989 DNA gyrase C-terminal domain, beta-propeller LPH61_09500 PF00521 DNA gyrase/topoisomerase IV, subunit A LPH61_09510 PF02321 Outer membrane efflux protein LPH61_09515 PF00529 HlyD membrane-fusion protein of T1SS LPH61_09515 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LPH61_09520 PF07690 Major Facilitator Superfamily LPH61_09525 PF12697 Alpha/beta hydrolase family LPH61_09530 PF00155 Aminotransferase class I and II LPH61_09540 PF01040 UbiA prenyltransferase family LPH61_09545 PF00753 Metallo-beta-lactamase superfamily LPH61_09550 PF12627 Probable RNA and SrmB- binding site of polymerase A LPH61_09550 PF01743 Poly A polymerase head domain LPH61_09550 PF01966 HD domain LPH61_09555 PF01464 Transglycosylase SLT domain LPH61_09555 PF14718 Soluble lytic murein transglycosylase L domain LPH61_09565 PF02666 Phosphatidylserine decarboxylase LPH61_09620 PF00456 Transketolase, thiamine diphosphate binding domain LPH61_09620 PF17831 Pyruvate dehydrogenase E1 component middle domain LPH61_09625 PF00698 Acyl transferase domain LPH61_09635 PF00550 Phosphopantetheine attachment site LPH61_09640 PF00109 Beta-ketoacyl synthase, N-terminal domain LPH61_09640 PF02801 Beta-ketoacyl synthase, C-terminal domain LPH61_09645 PF00425 chorismate binding enzyme LPH61_09645 PF04715 Anthranilate synthase component I, N terminal region LPH61_09650 PF02618 YceG-like family LPH61_09655 PF09115 DNA polymerase III, delta subunit, C terminal LPH61_09675 PF00459 Inositol monophosphatase family LPH61_09680 PF00588 SpoU rRNA Methylase family LPH61_09685 PF04055 Radical SAM superfamily LPH61_09690 PF09285 Elongation factor P, C-terminal LPH61_09690 PF08207 Elongation factor P (EF-P) KOW-like domain LPH61_09690 PF01132 Elongation factor P (EF-P) OB domain LPH61_09695 PF01979 Amidohydrolase family LPH61_09705 PF13419 Haloacid dehalogenase-like hydrolase LPH61_09720 PF00561 alpha/beta hydrolase fold LPH61_09725 PF08534 Redoxin LPH61_09755 PF00155 Aminotransferase class I and II LPH61_09760 PF00795 Carbon-nitrogen hydrolase LPH61_09770 PF00849 RNA pseudouridylate synthase LPH61_09770 PF01479 S4 domain LPH61_09775 PF04079 Segregation and condensation complex subunit ScpB LPH61_09780 PF02616 Segregation and condensation protein ScpA LPH61_09810 PF00528 Binding-protein-dependent transport system inner membrane component LPH61_09815 PF00528 Binding-protein-dependent transport system inner membrane component LPH61_09830 PF00795 Carbon-nitrogen hydrolase LPH61_09835 PF04371 Porphyromonas-type peptidyl-arginine deiminase LPH61_09845 PF00444 Ribosomal protein L36 LPH61_09850 PF02224 Cytidylate kinase LPH61_09855 PF00575 S1 RNA binding domain LPH61_09860 PF00216 Bacterial DNA-binding protein LPH61_09870 PF18073 Rubredoxin metal binding domain LPH61_09875 PF00953 Glycosyl transferase family 4 LPH61_09880 PF02719 Polysaccharide biosynthesis protein LPH61_09885 PF00483 Nucleotidyl transferase LPH61_09890 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LPH61_09890 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LPH61_09895 PF00478 IMP dehydrogenase / GMP reductase domain LPH61_09895 PF00571 CBS domain LPH61_09900 PF02540 NAD synthase LPH61_09900 PF00958 GMP synthase C terminal domain LPH61_09900 PF00117 Glutamine amidotransferase class-I LPH61_09950 PF09571 XcyI restriction endonuclease LPH61_09965 PF17760 UvrA interaction domain LPH61_09965 PF17755 UvrA DNA-binding domain LPH61_09965 PF00005 ABC transporter LPH61_09970 PF00829 Ribosomal prokaryotic L21 protein LPH61_09975 PF01016 Ribosomal L27 protein LPH61_09980 PF01018 GTP1/OBG LPH61_09980 PF01926 50S ribosome-binding GTPase LPH61_09985 PF01649 Ribosomal protein S20 LPH61_09990 PF03023 Lipid II flippase MurJ LPH61_09995 PF01687 Riboflavin kinase LPH61_09995 PF06574 FAD synthetase LPH61_10000 PF06827 Zinc finger found in FPG and IleRS LPH61_10000 PF00133 tRNA synthetases class I (I, L, M and V) LPH61_10000 PF08264 Anticodon-binding domain of tRNA LPH61_10005 PF01252 Signal peptidase (SPase) II LPH61_10010 PF02401 LytB protein LPH61_10080 PF13091 PLD-like domain LPH61_10080 PF13087 AAA domain LPH61_10085 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) LPH61_10085 PF06594 Haemolysin-type calcium binding protein related domain LPH61_10150 PF03412 Peptidase C39 family LPH61_10150 PF00005 ABC transporter LPH61_10150 PF00664 ABC transporter transmembrane region LPH61_10155 PF00155 Aminotransferase class I and II LPH61_10160 PF01522 Polysaccharide deacetylase LPH61_10165 PF00462 Glutaredoxin LPH61_10180 PF03466 LysR substrate binding domain LPH61_10180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH61_10190 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LPH61_10200 PF00857 Isochorismatase family LPH61_10210 PF00107 Zinc-binding dehydrogenase LPH61_10210 PF08240 Alcohol dehydrogenase GroES-like domain LPH61_10215 PF00107 Zinc-binding dehydrogenase LPH61_10215 PF08240 Alcohol dehydrogenase GroES-like domain LPH61_10235 PF00873 AcrB/AcrD/AcrF family LPH61_10240 PF00873 AcrB/AcrD/AcrF family LPH61_10245 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LPH61_10250 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term LPH61_10250 PF14489 QueF-like protein LPH61_10265 PF00330 Aconitase family (aconitate hydratase) LPH61_10270 PF00694 Aconitase C-terminal domain LPH61_10275 PF00180 Isocitrate/isopropylmalate dehydrogenase LPH61_10290 PF02397 Bacterial sugar transferase LPH61_10305 PF13439 Glycosyltransferase Family 4 LPH61_10305 PF00534 Glycosyl transferases group 1 LPH61_10315 PF01943 Polysaccharide biosynthesis protein LPH61_10330 PF00486 Transcriptional regulatory protein, C terminal LPH61_10330 PF00072 Response regulator receiver domain LPH61_10335 PF05958 tRNA (Uracil-5-)-methyltransferase LPH61_10340 PF01928 CYTH domain LPH61_10345 PF00933 Glycosyl hydrolase family 3 N terminal domain LPH61_10350 PF00156 Phosphoribosyl transferase domain LPH61_10355 PF01048 Phosphorylase superfamily LPH61_10360 PF00313 'Cold-shock' DNA-binding domain LPH61_10370 PF01668 SmpB protein LPH61_10380 PF03658 RnfH family Ubiquitin LPH61_10385 PF04355 SmpA / OmlA family LPH61_10390 PF01475 Ferric uptake regulator family LPH61_10395 PF02463 RecF/RecN/SMC N terminal domain LPH61_10400 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding LPH61_10400 PF01628 HrcA protein C terminal domain LPH61_10405 PF01025 GrpE LPH61_10410 PF00012 Hsp70 protein LPH61_10415 PF00226 DnaJ domain LPH61_10415 PF01556 DnaJ C terminal domain LPH61_10415 PF00684 DnaJ central domain LPH61_10425 PF00486 Transcriptional regulatory protein, C terminal LPH61_10425 PF00072 Response regulator receiver domain LPH61_10430 PF01219 Prokaryotic diacylglycerol kinase LPH61_10435 PF01790 Prolipoprotein diacylglyceryl transferase LPH61_10440 PF00303 Thymidylate synthase LPH61_10445 PF00186 Dihydrofolate reductase LPH61_10450 PF13700 Domain of unknown function (DUF4158) LPH61_10450 PF01526 Tn3 transposase DDE domain LPH61_10460 PF00486 Transcriptional regulatory protein, C terminal LPH61_10460 PF00072 Response regulator receiver domain LPH61_10465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH61_10465 PF02702 Osmosensitive K+ channel His kinase sensor domain LPH61_10465 PF00512 His Kinase A (phospho-acceptor) domain LPH61_10465 PF13492 GAF domain LPH61_10465 PF13493 Domain of unknown function (DUF4118) LPH61_10470 PF02669 K+-transporting ATPase, c chain LPH61_10480 PF03814 Potassium-transporting ATPase A subunit LPH61_10495 PF00149 Calcineurin-like phosphoesterase LPH61_10500 PF04379 ApaG domain LPH61_10505 PF00398 Ribosomal RNA adenine dimethylase LPH61_10510 PF00929 Exonuclease LPH61_10515 PF01895 PhoU domain LPH61_10520 PF00005 ABC transporter LPH61_10525 PF00528 Binding-protein-dependent transport system inner membrane component LPH61_10530 PF00528 Binding-protein-dependent transport system inner membrane component LPH61_10535 PF12849 PBP superfamily domain LPH61_10540 PF02254 TrkA-N domain LPH61_10540 PF00999 Sodium/hydrogen exchanger family LPH61_10545 PF00593 TonB dependent receptor LPH61_10545 PF07715 TonB-dependent Receptor Plug Domain LPH61_10550 PF01323 DSBA-like thioredoxin domain LPH61_10560 PF12848 ABC transporter LPH61_10560 PF00005 ABC transporter LPH61_10575 PF01066 CDP-alcohol phosphatidyltransferase LPH61_10580 PF01541 GIY-YIG catalytic domain LPH61_10580 PF02151 UvrB/uvrC motif LPH61_10580 PF08459 UvrC Helix-hairpin-helix N-terminal LPH61_10585 PF01451 Low molecular weight phosphotyrosine protein phosphatase LPH61_10590 PF02348 Cytidylyltransferase LPH61_10595 PF10609 NUBPL iron-transfer P-loop NTPase LPH61_10600 PF00202 Aminotransferase class-III LPH61_10610 PF00490 Delta-aminolevulinic acid dehydratase LPH61_10620 PF12146 Serine aminopeptidase, S33 LPH61_10635 PF13932 GidA associated domain LPH61_10635 PF01134 Glucose inhibited division protein A LPH61_10655 PF13649 Methyltransferase domain LPH61_10675 PF02649 Type I GTP cyclohydrolase folE2 LPH61_10680 PF00132 Bacterial transferase hexapeptide (six repeats) LPH61_10685 PF00873 AcrB/AcrD/AcrF family LPH61_10690 PF00529 HlyD membrane-fusion protein of T1SS LPH61_10690 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LPH61_10695 PF05088 Bacterial NAD-glutamate dehydrogenase LPH61_10700 PF01513 ATP-NAD kinase LPH61_10720 PF12706 Beta-lactamase superfamily domain LPH61_10730 PF00929 Exonuclease LPH61_10730 PF08411 Exonuclease C-terminal LPH61_10750 PF00999 Sodium/hydrogen exchanger family LPH61_10760 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LPH61_10770 PF01812 5-formyltetrahydrofolate cyclo-ligase family LPH61_10790 PF03695 Uncharacterised protein family (UPF0149) LPH61_10795 PF00557 Metallopeptidase family M24 LPH61_10795 PF05195 Aminopeptidase P, N-terminal domain LPH61_10800 PF00293 NUDIX domain LPH61_10835 PF01063 Amino-transferase class IV LPH61_10850 PF02954 Bacterial regulatory protein, Fis family LPH61_10860 PF01381 Helix-turn-helix LPH61_10875 PF00535 Glycosyl transferase family 2 LPH61_10885 PF00925 GTP cyclohydrolase II LPH61_10895 PF08534 Redoxin LPH61_10920 PF00959 Phage lysozyme LPH61_10940 PF01367 5'-3' exonuclease, C-terminal SAM fold LPH61_10940 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LPH61_10940 PF00476 DNA polymerase family A LPH61_10940 PF01612 3'-5' exonuclease LPH61_10965 PF07963 Prokaryotic N-terminal methylation motif LPH61_10965 PF00114 Pilin (bacterial filament) LPH61_10980 PF16123 Hydroxyacylglutathione hydrolase C-terminus LPH61_10980 PF00753 Metallo-beta-lactamase superfamily LPH61_10990 PF00075 RNase H LPH61_10995 PF00929 Exonuclease LPH61_11015 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LPH61_11025 PF13632 Glycosyl transferase family group 2 LPH61_11030 PF02230 Phospholipase/Carboxylesterase LPH61_11035 PF06580 Histidine kinase LPH61_11035 PF07694 5TMR of 5TMR-LYT LPH61_11040 PF00072 Response regulator receiver domain LPH61_11040 PF04397 LytTr DNA-binding domain LPH61_11045 PF03900 Porphobilinogen deaminase, C-terminal domain LPH61_11045 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LPH61_11065 PF00437 Type II/IV secretion system protein LPH61_11070 PF00437 Type II/IV secretion system protein LPH61_11085 PF00535 Glycosyl transferase family 2 LPH61_11095 PF00109 Beta-ketoacyl synthase, N-terminal domain LPH61_11095 PF02801 Beta-ketoacyl synthase, C-terminal domain LPH61_11110 PF09924 Uncharacterised conserved protein (DUF2156) LPH61_11110 PF03706 Lysylphosphatidylglycerol synthase TM region LPH61_11115 PF01042 Endoribonuclease L-PSP LPH61_11130 PF01430 Hsp33 protein LPH61_11135 PF00912 Transglycosylase LPH61_11140 PF05192 MutS domain III LPH61_11140 PF05190 MutS family domain IV LPH61_11140 PF00488 MutS domain V LPH61_11140 PF05188 MutS domain II LPH61_11140 PF01624 MutS domain I LPH61_11145 PF01168 Alanine racemase, N-terminal domain LPH61_11160 PF02237 Biotin protein ligase C terminal domain LPH61_11160 PF08279 HTH domain LPH61_11160 PF03099 Biotin/lipoate A/B protein ligase family LPH61_11165 PF03309 Type III pantothenate kinase LPH61_11195 PF01183 Glycosyl hydrolases family 25 LPH61_11215 PF01381 Helix-turn-helix LPH61_11225 PF07963 Prokaryotic N-terminal methylation motif LPH61_11225 PF00114 Pilin (bacterial filament) LPH61_11325 PF00589 Phage integrase family LPH61_11340 PF00959 Phage lysozyme LPH61_11355 PF00574 Clp protease LPH61_11395 PF01022 Bacterial regulatory protein, arsR family LPH61_11410 PF00873 AcrB/AcrD/AcrF family LPH61_11435 PF00581 Rhodanese-like domain LPH61_11440 PF02556 Preprotein translocase subunit SecB LPH61_11445 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LPH61_11445 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LPH61_11470 PF12169 DNA polymerase III subunits gamma and tau domain III LPH61_11470 PF12170 DNA polymerase III tau subunit V interacting with alpha LPH61_11475 PF02575 YbaB/EbfC DNA-binding family LPH61_11480 PF02132 RecR protein LPH61_11480 PF13662 Toprim domain LPH61_11485 PF01230 HIT domain LPH61_11495 PF11992 Domain of unknown function (DUF3488) LPH61_11495 PF13559 Domain of unknown function (DUF4129) LPH61_11495 PF01841 Transglutaminase-like superfamily LPH61_11505 PF07726 ATPase family associated with various cellular activities (AAA) LPH61_11505 PF17863 AAA lid domain LPH61_11515 PF02620 Large ribosomal RNA subunit accumulation protein YceD LPH61_11520 PF01783 Ribosomal L32p protein family LPH61_11525 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LPH61_11525 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LPH61_11540 PF00553 Cellulose binding domain LPH61_11540 PF00041 Fibronectin type III domain LPH61_11540 PF01341 Glycosyl hydrolases family 6 LPH61_11545 PF08502 LeuA allosteric (dimerisation) domain LPH61_11545 PF00682 HMGL-like LPH61_11550 PF00291 Pyridoxal-phosphate dependent enzyme LPH61_11560 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LPH61_11560 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LPH61_11560 PF00205 Thiamine pyrophosphate enzyme, central domain LPH61_11565 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LPH61_11565 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LPH61_11570 PF11818 C-terminal domain of tail specific protease (DUF3340) LPH61_11570 PF00595 PDZ domain LPH61_11570 PF03572 Peptidase family S41 LPH61_11570 PF17804 Tail specific protease N-terminal domain LPH61_11575 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family LPH61_11580 PF02566 OsmC-like protein LPH61_11585 PF03969 AFG1-like ATPase LPH61_11590 PF02129 X-Pro dipeptidyl-peptidase (S15 family) LPH61_11595 PF02492 CobW/HypB/UreG, nucleotide-binding domain LPH61_11595 PF07683 Cobalamin synthesis protein cobW C-terminal domain LPH61_11605 PF00551 Formyl transferase LPH61_11615 PF03109 ABC1 family LPH61_11625 PF12241 Trans-2-enoyl-CoA reductase catalytic region LPH61_11625 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase LPH61_11625 PF07055 Enoyl reductase FAD binding domain LPH61_11645 PF00881 Nitroreductase family LPH61_11650 PF04264 YceI-like domain LPH61_11655 PF02673 Bacitracin resistance protein BacA LPH61_11660 PF00120 Glutamine synthetase, catalytic domain LPH61_11660 PF03951 Glutamine synthetase, beta-Grasp domain LPH61_11665 PF00543 Nitrogen regulatory protein P-II LPH61_11670 PF00909 Ammonium Transporter Family LPH61_11685 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LPH61_11685 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LPH61_11690 PF00890 FAD binding domain LPH61_11690 PF02910 Fumarate reductase flavoprotein C-term LPH61_11695 PF02445 Quinolinate synthetase A protein LPH61_11700 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LPH61_11700 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LPH61_11705 PF01026 TatD related DNase LPH61_11790 PF01850 PIN domain LPH61_11815 PF02881 SRP54-type protein, helical bundle domain LPH61_11815 PF00448 SRP54-type protein, GTPase domain LPH61_11820 PF00633 Helix-hairpin-helix motif LPH61_11820 PF14815 NUDIX domain LPH61_11820 PF00730 HhH-GPD superfamily base excision DNA repair protein LPH61_11825 PF04362 Bacterial Fe(2+) trafficking LPH61_11835 PF01709 Transcriptional regulator LPH61_11840 PF02075 Crossover junction endodeoxyribonuclease RuvC LPH61_11845 PF07499 RuvA, C-terminal domain LPH61_11845 PF01330 RuvA N terminal domain LPH61_11850 PF02705 K+ potassium transporter LPH61_11855 PF17864 RuvB AAA lid domain LPH61_11855 PF05491 RuvB C-terminal winged helix domain LPH61_11855 PF05496 Holliday junction DNA helicase RuvB P-loop domain LPH61_11860 PF03061 Thioesterase superfamily LPH61_11865 PF01618 MotA/TolQ/ExbB proton channel family LPH61_11870 PF02472 Biopolymer transport protein ExbD/TolR LPH61_11880 PF04052 TolB amino-terminal domain LPH61_11880 PF07676 WD40-like Beta Propeller Repeat LPH61_11885 PF00691 OmpA family LPH61_11895 PF04055 Radical SAM superfamily LPH61_11900 PF00300 Histidine phosphatase superfamily (branch 1) LPH61_11905 PF04493 Endonuclease V LPH61_11910 PF00854 POT family LPH61_11915 PF00255 Glutathione peroxidase LPH61_11920 PF00970 Oxidoreductase FAD-binding domain LPH61_11920 PF00175 Oxidoreductase NAD-binding domain LPH61_11925 PF13667 ThiC-associated domain LPH61_11925 PF01964 Radical SAM ThiC family LPH61_11930 PF10459 Peptidase S46 LPH61_11935 PF00300 Histidine phosphatase superfamily (branch 1) LPH61_11945 PF14850 DNA-binding domain of Proline dehydrogenase LPH61_11945 PF00171 Aldehyde dehydrogenase family LPH61_11945 PF01619 Proline dehydrogenase LPH61_11945 PF18327 Proline utilization A proline dehydrogenase N-terminal domain LPH61_11980 PF03135 CagE, TrbE, VirB family, component of type IV transporter system LPH61_12000 PF04335 VirB8 protein LPH61_12010 PF03743 Bacterial conjugation TrbI-like protein LPH61_12015 PF00437 Type II/IV secretion system protein LPH61_12020 PF02534 Type IV secretory system Conjugative DNA transfer LPH61_12080 PF02796 Helix-turn-helix domain of resolvase LPH61_12080 PF00239 Resolvase, N terminal domain LPH61_12120 PF07282 Putative transposase DNA-binding domain LPH61_12120 PF12323 Helix-turn-helix domain LPH61_12120 PF01385 Probable transposase LPH61_12135 PF08681 Protein of unknown function (DUF1778)