locus-tag class description PLS229_00005 PF00308 Bacterial dnaA protein PLS229_00005 PF08299 Bacterial dnaA protein helix-turn-helix PLS229_00005 PF11638 DnaA N-terminal domain PLS229_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain PLS229_00010 PF02767 DNA polymerase III beta subunit, central domain PLS229_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain PLS229_00015 PF02463 RecF/RecN/SMC N terminal domain PLS229_00020 PF01751 Toprim domain PLS229_00020 PF00986 DNA gyrase B subunit, carboxyl terminus PLS229_00020 PF18053 DNA gyrase B subunit insert domain PLS229_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PLS229_00020 PF00204 DNA gyrase B PLS229_00030 PF01435 Peptidase family M48 PLS229_00040 PF03544 Gram-negative bacterial TonB protein C-terminal PLS229_00045 PF01618 MotA/TolQ/ExbB proton channel family PLS229_00050 PF02472 Biopolymer transport protein ExbD/TolR PLS229_00055 PF02472 Biopolymer transport protein ExbD/TolR PLS229_00075 PF01218 Coproporphyrinogen III oxidase PLS229_00100 PF00793 DAHP synthetase I family PLS229_00105 PF00114 Pilin (bacterial filament) PLS229_00105 PF07963 Prokaryotic N-terminal methylation motif PLS229_00125 PF05567 Neisseria PilC beta-propeller domain PLS229_00135 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family PLS229_00140 PF00155 Aminotransferase class I and II PLS229_00145 PF01741 Large-conductance mechanosensitive channel, MscL PLS229_00175 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ PLS229_00185 PF03461 TRCF domain PLS229_00185 PF00270 DEAD/DEAH box helicase PLS229_00185 PF02559 CarD-like/TRCF domain PLS229_00185 PF17757 UvrB interaction domain PLS229_00185 PF00271 Helicase conserved C-terminal domain PLS229_00190 PF01220 Dehydroquinase class II PLS229_00195 PF00364 Biotin-requiring enzyme PLS229_00200 PF02785 Biotin carboxylase C-terminal domain PLS229_00200 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PLS229_00200 PF00289 Biotin carboxylase, N-terminal domain PLS229_00205 PF00580 UvrD/REP helicase N-terminal domain PLS229_00205 PF13361 UvrD-like helicase C-terminal domain PLS229_00215 PF00042 Globin PLS229_00215 PF00175 Oxidoreductase NAD-binding domain PLS229_00215 PF00970 Oxidoreductase FAD-binding domain PLS229_00225 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ PLS229_00230 PF06613 KorB C-terminal beta-barrel domain PLS229_00230 PF02195 ParB-like nuclease domain PLS229_00230 PF08535 KorB domain PLS229_00245 PF06968 Biotin and Thiamin Synthesis associated domain PLS229_00245 PF04055 Radical SAM superfamily PLS229_00250 PF01734 Patatin-like phospholipase PLS229_00255 PF01040 UbiA prenyltransferase family PLS229_00270 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family PLS229_00305 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain PLS229_00305 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain PLS229_00315 PF02881 SRP54-type protein, helical bundle domain PLS229_00315 PF02978 Signal peptide binding domain PLS229_00315 PF00448 SRP54-type protein, GTPase domain PLS229_00335 PF13953 PapC C-terminal domain PLS229_00335 PF13954 PapC N-terminal domain PLS229_00335 PF00577 Outer membrane usher protein PLS229_00340 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain PLS229_00340 PF02753 Pili assembly chaperone PapD, C-terminal domain PLS229_00345 PF16970 Type-1 fimbrial protein, A PLS229_00350 PF02464 Competence-damaged protein PLS229_00355 PF00083 Sugar (and other) transporter PLS229_00360 PF01926 50S ribosome-binding GTPase PLS229_00360 PF13167 GTP-binding GTPase N-terminal PLS229_00360 PF16360 GTP-binding GTPase Middle Region PLS229_00365 PF17209 Hfq protein PLS229_00375 PF00809 Pterin binding enzyme PLS229_00380 PF01434 Peptidase family M41 PLS229_00380 PF06480 FtsH Extracellular PLS229_00380 PF17862 AAA+ lid domain PLS229_00380 PF00004 ATPase family associated with various cellular activities (AAA) PLS229_00385 PF01728 FtsJ-like methyltransferase PLS229_00390 PF01985 CRS1 / YhbY (CRM) domain PLS229_00405 PF00920 Dehydratase family PLS229_00435 PF03279 Bacterial lipid A biosynthesis acyltransferase PLS229_00440 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) PLS229_00455 PF00886 Ribosomal protein S16 PLS229_00460 PF05239 PRC-barrel domain PLS229_00460 PF01782 RimM N-terminal domain PLS229_00465 PF01746 tRNA (Guanine-1)-methyltransferase PLS229_00470 PF01245 Ribosomal protein L19 PLS229_00475 PF00557 Metallopeptidase family M24 PLS229_00485 PF14602 Hexapeptide repeat of succinyl-transferase PLS229_00485 PF00132 Bacterial transferase hexapeptide (six repeats) PLS229_00485 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal PLS229_00490 PF03960 ArsC family PLS229_00495 PF07687 Peptidase dimerisation domain PLS229_00495 PF01546 Peptidase family M20/M25/M40 PLS229_00500 PF00733 Asparagine synthase PLS229_00500 PF13537 Glutamine amidotransferase domain PLS229_00510 PF03060 Nitronate monooxygenase PLS229_00520 PF01726 LexA DNA binding domain PLS229_00520 PF00717 Peptidase S24-like PLS229_00525 PF00154 recA bacterial DNA recombination protein PLS229_00530 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain PLS229_00530 PF02272 DHHA1 domain PLS229_00530 PF01411 tRNA synthetases class II (A) PLS229_00535 PF02599 Global regulator protein family PLS229_00545 PF01432 Peptidase family M3 PLS229_00560 PF07731 Multicopper oxidase PLS229_00560 PF00394 Multicopper oxidase PLS229_00560 PF07732 Multicopper oxidase PLS229_00565 PF05275 Copper resistance protein B precursor (CopB) PLS229_00570 PF00133 tRNA synthetases class I (I, L, M and V) PLS229_00570 PF10458 Valyl tRNA synthetase tRNA binding arm PLS229_00570 PF08264 Anticodon-binding domain of tRNA PLS229_00590 PF02789 Cytosol aminopeptidase family, N-terminal domain PLS229_00590 PF00883 Cytosol aminopeptidase family, catalytic domain PLS229_00610 PF01380 SIS domain PLS229_00625 PF17284 Spermidine synthase tetramerisation domain PLS229_00630 PF17944 Arginine decarboxylase C-terminal helical extension PLS229_00630 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain PLS229_00630 PF17810 Arginine decarboxylase helical bundle domain PLS229_00635 PF00106 short chain dehydrogenase PLS229_00645 PF05746 DALR anticodon binding domain PLS229_00645 PF00750 tRNA synthetases class I (R) PLS229_00645 PF03485 Arginyl tRNA synthetase N terminal domain PLS229_00650 PF04002 RadC-like JAB domain PLS229_00655 PF04127 DNA / pantothenate metabolism flavoprotein PLS229_00655 PF02441 Flavoprotein PLS229_00660 PF00692 dUTPase PLS229_00665 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PLS229_00665 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PLS229_00665 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain PLS229_00665 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PLS229_00675 PF00156 Phosphoribosyl transferase domain PLS229_00720 PF07690 Major Facilitator Superfamily PLS229_00725 PF03702 Anhydro-N-acetylmuramic acid kinase PLS229_00730 PF01551 Peptidase family M23 PLS229_00730 PF04225 Opacity-associated protein A LysM-like domain PLS229_00735 PF00579 tRNA synthetases class I (W and Y) PLS229_00765 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain PLS229_00765 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain PLS229_00795 PF00009 Elongation factor Tu GTP binding domain PLS229_00795 PF16658 Class II release factor RF3, C-terminal domain PLS229_00800 PF03006 Haemolysin-III related PLS229_00805 PF00535 Glycosyl transferase family 2 PLS229_00810 PF01026 TatD related DNase PLS229_00825 PF01597 Glycine cleavage H-protein PLS229_00830 PF08669 Glycine cleavage T-protein C-terminal barrel domain PLS229_00830 PF01571 Aminomethyltransferase folate-binding domain PLS229_00840 PF01145 SPFH domain / Band 7 family PLS229_00840 PF16200 C-terminal region of band_7 PLS229_00845 PF03819 MazG nucleotide pyrophosphohydrolase domain PLS229_00850 PF00459 Inositol monophosphatase family PLS229_00855 PF00293 NUDIX domain PLS229_00860 PF00202 Aminotransferase class-III PLS229_00865 PF04452 RNA methyltransferase PLS229_00875 PF00271 Helicase conserved C-terminal domain PLS229_00875 PF00270 DEAD/DEAH box helicase PLS229_00880 PF01242 6-pyruvoyl tetrahydropterin synthase PLS229_00910 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit PLS229_00915 PF14579 Helix-hairpin-helix motif PLS229_00915 PF02811 PHP domain PLS229_00915 PF17657 Bacterial DNA polymerase III alpha subunit finger domain PLS229_00915 PF01336 OB-fold nucleic acid binding domain PLS229_00915 PF07733 Bacterial DNA polymerase III alpha NTPase domain PLS229_00920 PF01259 SAICAR synthetase PLS229_00925 PF05099 Tellurite resistance protein TerB PLS229_00925 PF00226 DnaJ domain PLS229_00930 PF00834 Ribulose-phosphate 3 epimerase family PLS229_00940 PF00425 chorismate binding enzyme PLS229_00940 PF04715 Anthranilate synthase component I, N terminal region PLS229_00945 PF00117 Glutamine amidotransferase class-I PLS229_00950 PF02885 Glycosyl transferase family, helical bundle domain PLS229_00950 PF00591 Glycosyl transferase family, a/b domain PLS229_00955 PF00218 Indole-3-glycerol phosphate synthase PLS229_00970 PF12849 PBP superfamily domain PLS229_00995 PF01321 Creatinase/Prolidase N-terminal domain PLS229_00995 PF00557 Metallopeptidase family M24 PLS229_01015 PF01702 Queuine tRNA-ribosyltransferase PLS229_01020 PF02699 Preprotein translocase subunit PLS229_01025 PF02355 Protein export membrane protein PLS229_01025 PF07549 SecD/SecF GG Motif PLS229_01025 PF13721 SecD export protein N-terminal TM region PLS229_01030 PF02355 Protein export membrane protein PLS229_01030 PF07549 SecD/SecF GG Motif PLS229_01040 PF01743 Poly A polymerase head domain PLS229_01040 PF12627 Probable RNA and SrmB- binding site of polymerase A PLS229_01040 PF12626 Polymerase A arginine-rich C-terminus PLS229_01045 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) PLS229_01050 PF02548 Ketopantoate hydroxymethyltransferase PLS229_01055 PF02569 Pantoate-beta-alanine ligase PLS229_01060 PF02261 Aspartate decarboxylase PLS229_01065 PF00342 Phosphoglucose isomerase PLS229_01075 PF02576 RimP N-terminal domain PLS229_01075 PF17384 RimP C-terminal SH3 domain PLS229_01080 PF00575 S1 RNA binding domain PLS229_01080 PF08529 NusA N-terminal domain PLS229_01080 PF13184 NusA-like KH domain PLS229_01085 PF08364 Bacterial translation initiation factor IF-2 associated region PLS229_01085 PF11987 Translation-initiation factor 2 PLS229_01085 PF00009 Elongation factor Tu GTP binding domain PLS229_01085 PF04760 Translation initiation factor IF-2, N-terminal region PLS229_01090 PF02033 Ribosome-binding factor A PLS229_01095 PF01509 TruB family pseudouridylate synthase (N terminal domain) PLS229_01095 PF09157 Pseudouridine synthase II TruB, C-terminal PLS229_01095 PF16198 tRNA pseudouridylate synthase B C-terminal domain PLS229_01100 PF00312 Ribosomal protein S15 PLS229_01105 PF00013 KH domain PLS229_01105 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain PLS229_01105 PF03725 3' exoribonuclease family, domain 2 PLS229_01105 PF00575 S1 RNA binding domain PLS229_01105 PF01138 3' exoribonuclease family, domain 1 PLS229_01110 PF01638 HxlR-like helix-turn-helix PLS229_01115 PF05368 NmrA-like family PLS229_01120 PF00873 AcrB/AcrD/AcrF family PLS229_01130 PF00999 Sodium/hydrogen exchanger family PLS229_01150 PF00271 Helicase conserved C-terminal domain PLS229_01150 PF03880 DbpA RNA binding domain PLS229_01150 PF00270 DEAD/DEAH box helicase PLS229_01155 PF01012 Electron transfer flavoprotein domain PLS229_01155 PF00766 Electron transfer flavoprotein FAD-binding domain PLS229_01160 PF01012 Electron transfer flavoprotein domain PLS229_01165 PF16363 GDP-mannose 4,6 dehydratase PLS229_01170 PF00483 Nucleotidyl transferase PLS229_01175 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase PLS229_01180 PF04321 RmlD substrate binding domain PLS229_01185 PF01050 Mannose-6-phosphate isomerase PLS229_01185 PF00483 Nucleotidyl transferase PLS229_01190 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PLS229_01190 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain PLS229_01190 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PLS229_01190 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PLS229_01240 PF00082 Subtilase family PLS229_01240 PF12951 Passenger-associated-transport-repeat PLS229_01240 PF03797 Autotransporter beta-domain PLS229_01250 PF06779 Uncharacterised MFS-type transporter YbfB PLS229_01265 PF00365 Phosphofructokinase PLS229_01275 PF02875 Mur ligase family, glutamate ligase domain PLS229_01275 PF08245 Mur ligase middle domain PLS229_01275 PF01225 Mur ligase family, catalytic domain PLS229_01280 PF01569 PAP2 superfamily PLS229_01305 PF00892 EamA-like transporter family PLS229_01310 PF02789 Cytosol aminopeptidase family, N-terminal domain PLS229_01310 PF00883 Cytosol aminopeptidase family, catalytic domain PLS229_01320 PF01594 AI-2E family transporter PLS229_01340 PF00595 PDZ domain PLS229_01345 PF08338 Domain of unknown function (DUF1731) PLS229_01345 PF01370 NAD dependent epimerase/dehydratase family PLS229_01350 PF13193 AMP-binding enzyme C-terminal domain PLS229_01350 PF00501 AMP-binding enzyme PLS229_01355 PF00330 Aconitase family (aconitate hydratase) PLS229_01355 PF00694 Aconitase C-terminal domain PLS229_01370 PF06434 Aconitate hydratase 2 N-terminus PLS229_01370 PF11791 Aconitate B N-terminal domain PLS229_01370 PF00330 Aconitase family (aconitate hydratase) PLS229_01385 PF02384 N-6 DNA Methylase PLS229_01390 PF01420 Type I restriction modification DNA specificity domain PLS229_01400 PF11867 Domain of unknown function (DUF3387) PLS229_01400 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) PLS229_01400 PF18766 SWI2/SNF2 ATPase PLS229_01420 PF00121 Triosephosphate isomerase PLS229_01435 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 PLS229_01440 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit PLS229_01445 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit PLS229_01450 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit PLS229_01460 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit PLS229_01460 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region PLS229_01460 PF10531 SLBB domain PLS229_01465 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region PLS229_01465 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal PLS229_01465 PF00384 Molybdopterin oxidoreductase PLS229_01470 PF00146 NADH dehydrogenase PLS229_01475 PF12838 4Fe-4S dicluster domain PLS229_01480 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 PLS229_01485 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L PLS229_01490 PF00361 Proton-conducting membrane transporter PLS229_01490 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus PLS229_01495 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus PLS229_01495 PF00361 Proton-conducting membrane transporter PLS229_01500 PF00361 Proton-conducting membrane transporter PLS229_01505 PF00106 short chain dehydrogenase PLS229_01510 PF03600 Citrate transporter PLS229_01520 PF00072 Response regulator receiver domain PLS229_01520 PF00486 Transcriptional regulatory protein, C terminal PLS229_01525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PLS229_01525 PF08521 Two-component sensor kinase N-terminal PLS229_01525 PF00512 His Kinase A (phospho-acceptor) domain PLS229_01535 PF00072 Response regulator receiver domain PLS229_01535 PF00196 Bacterial regulatory proteins, luxR family PLS229_01540 PF00072 Response regulator receiver domain PLS229_01540 PF00512 His Kinase A (phospho-acceptor) domain PLS229_01540 PF01627 Hpt domain PLS229_01540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PLS229_01540 PF00672 HAMP domain PLS229_01550 PF00375 Sodium:dicarboxylate symporter family PLS229_01555 PF01515 Phosphate acetyl/butaryl transferase PLS229_01555 PF03949 Malic enzyme, NAD binding domain PLS229_01555 PF00390 Malic enzyme, N-terminal domain PLS229_01560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PLS229_01560 PF00183 Hsp90 protein PLS229_01570 PF01467 Cytidylyltransferase-like PLS229_01580 PF00037 4Fe-4S binding domain PLS229_01590 PF05230 MASE2 domain PLS229_01590 PF00990 Diguanylate cyclase, GGDEF domain PLS229_01595 PF01551 Peptidase family M23 PLS229_01595 PF01476 LysM domain PLS229_01600 PF01979 Amidohydrolase family PLS229_01605 PF01809 Putative membrane protein insertion efficiency factor PLS229_01610 PF01258 Prokaryotic dksA/traR C4-type zinc finger PLS229_01635 PF02657 Fe-S metabolism associated domain PLS229_01640 PF01406 tRNA synthetases class I (C) catalytic domain PLS229_01640 PF09190 DALR domain PLS229_01650 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain PLS229_01650 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain PLS229_01655 PF00764 Arginosuccinate synthase PLS229_01660 PF07687 Peptidase dimerisation domain PLS229_01660 PF01546 Peptidase family M20/M25/M40 PLS229_01665 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase PLS229_01665 PF00696 Amino acid kinase family PLS229_01675 PF01118 Semialdehyde dehydrogenase, NAD binding domain PLS229_01680 PF00206 Lyase PLS229_01690 PF01472 PUA domain PLS229_01690 PF00696 Amino acid kinase family PLS229_01695 PF00171 Aldehyde dehydrogenase family PLS229_01705 PF00239 Resolvase, N terminal domain PLS229_01705 PF02796 Helix-turn-helix domain of resolvase PLS229_01730 PF00239 Resolvase, N terminal domain PLS229_01730 PF02796 Helix-turn-helix domain of resolvase PLS229_01780 PF03524 Conjugal transfer protein PLS229_01835 PF02627 Carboxymuconolactone decarboxylase family PLS229_01855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PLS229_01855 PF03466 LysR substrate binding domain PLS229_01860 PF05016 ParE toxin of type II toxin-antitoxin system, parDE PLS229_01865 PF09386 Antitoxin ParD PLS229_01870 PF00239 Resolvase, N terminal domain PLS229_01870 PF02796 Helix-turn-helix domain of resolvase PLS229_01935 PF06594 Haemolysin-type calcium binding protein related domain PLS229_01935 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) PLS229_01940 PF14437 MafB19-like deaminase PLS229_01945 PF02742 Iron dependent repressor, metal binding and dimerisation domain PLS229_01945 PF01325 Iron dependent repressor, N-terminal DNA binding domain PLS229_01950 PF01566 Natural resistance-associated macrophage protein PLS229_01965 PF04376 Arginine-tRNA-protein transferase, N terminus PLS229_01965 PF04377 Arginine-tRNA-protein transferase, C terminus PLS229_01995 PF00082 Subtilase family PLS229_01995 PF03797 Autotransporter beta-domain PLS229_01995 PF12951 Passenger-associated-transport-repeat PLS229_02025 PF01553 Acyltransferase PLS229_02040 PF05221 S-adenosyl-L-homocysteine hydrolase PLS229_02040 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain PLS229_02055 PF01351 Ribonuclease HII PLS229_02060 PF02684 Lipid-A-disaccharide synthetase PLS229_02065 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 PLS229_02065 PF00132 Bacterial transferase hexapeptide (six repeats) PLS229_02070 PF07977 FabA-like domain PLS229_02075 PF00132 Bacterial transferase hexapeptide (six repeats) PLS229_02075 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD PLS229_02080 PF07244 Surface antigen variable number repeat PLS229_02080 PF01103 Surface antigen PLS229_02085 PF17820 PDZ domain PLS229_02085 PF02163 Peptidase family M50 PLS229_02090 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase PLS229_02090 PF13288 DXP reductoisomerase C-terminal domain PLS229_02090 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain PLS229_02100 PF01255 Putative undecaprenyl diphosphate synthase PLS229_02105 PF01765 Ribosome recycling factor PLS229_02135 PF04305 Protein of unknown function (DUF455) PLS229_02140 PF00696 Amino acid kinase family PLS229_02215 PF01081 KDPG and KHG aldolase PLS229_02220 PF00920 Dehydratase family PLS229_02225 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase PLS229_02230 PF02685 Glucokinase PLS229_02235 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain PLS229_02235 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain PLS229_02240 PF00005 ABC transporter PLS229_02240 PF17912 MalK OB fold domain PLS229_02255 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit PLS229_02260 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit PLS229_02265 PF00890 FAD binding domain PLS229_02265 PF02910 Fumarate reductase flavoprotein C-term PLS229_02270 PF13237 4Fe-4S dicluster domain PLS229_02270 PF13085 2Fe-2S iron-sulfur cluster binding domain PLS229_02275 PF03937 Flavinator of succinate dehydrogenase PLS229_02285 PF12704 MacB-like periplasmic core domain PLS229_02285 PF02687 FtsX-like permease family PLS229_02290 PF00005 ABC transporter PLS229_02295 PF00753 Metallo-beta-lactamase superfamily PLS229_02295 PF03772 Competence protein PLS229_02310 PF00005 ABC transporter PLS229_02310 PF00664 ABC transporter transmembrane region PLS229_02315 PF02606 Tetraacyldisaccharide-1-P 4'-kinase PLS229_02320 PF10609 NUBPL iron-transfer P-loop NTPase PLS229_02320 PF01883 Iron-sulfur cluster assembly protein PLS229_02335 PF13091 PLD-like domain PLS229_02355 PF03358 NADPH-dependent FMN reductase PLS229_02360 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain PLS229_02360 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family PLS229_02375 PF01300 Telomere recombination PLS229_02380 PF01131 DNA topoisomerase PLS229_02380 PF01751 Toprim domain PLS229_02380 PF13368 Topoisomerase C-terminal repeat PLS229_02390 PF04361 Protein of unknown function (DUF494) PLS229_02395 PF17782 DprA winged helix domain PLS229_02395 PF02481 DNA recombination-mediator protein A PLS229_02405 PF01327 Polypeptide deformylase PLS229_02410 PF02911 Formyl transferase, C-terminal domain PLS229_02410 PF00551 Formyl transferase PLS229_02415 PF01029 NusB family PLS229_02415 PF01189 16S rRNA methyltransferase RsmB/F PLS229_02420 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase PLS229_02435 PF07963 Prokaryotic N-terminal methylation motif PLS229_02435 PF00114 Pilin (bacterial filament) PLS229_02555 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain PLS229_02555 PF00476 DNA polymerase family A PLS229_02555 PF01612 3'-5' exonuclease PLS229_02555 PF01367 5'-3' exonuclease, C-terminal SAM fold PLS229_02560 PF01113 Dihydrodipicolinate reductase, N-terminus PLS229_02560 PF05173 Dihydrodipicolinate reductase, C-terminus PLS229_02565 PF00117 Glutamine amidotransferase class-I PLS229_02565 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain PLS229_02570 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PLS229_02570 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain PLS229_02570 PF02142 MGS-like domain PLS229_02575 PF01272 Transcription elongation factor, GreA/GreB, C-term PLS229_02575 PF03449 Transcription elongation factor, N-terminal PLS229_02585 PF02272 DHHA1 domain PLS229_02585 PF01368 DHH family PLS229_02585 PF17768 RecJ OB domain PLS229_02595 PF00152 tRNA synthetases class II (D, K and N) PLS229_02595 PF01336 OB-fold nucleic acid binding domain PLS229_02600 PF00072 Response regulator receiver domain PLS229_02605 PF00072 Response regulator receiver domain PLS229_02605 PF01627 Hpt domain PLS229_02605 PF00512 His Kinase A (phospho-acceptor) domain PLS229_02605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PLS229_02610 PF00378 Enoyl-CoA hydratase/isomerase PLS229_02615 PF01842 ACT domain PLS229_02615 PF00696 Amino acid kinase family PLS229_02625 PF08245 Mur ligase middle domain PLS229_02645 PF00293 NUDIX domain PLS229_02655 PF02219 Methylenetetrahydrofolate reductase PLS229_02665 PF02545 Maf-like protein PLS229_02670 PF10150 Ribonuclease E/G family PLS229_02670 PF00575 S1 RNA binding domain PLS229_02680 PF01523 Putative modulator of DNA gyrase PLS229_02685 PF04751 Protein of unknown function (DUF615) PLS229_02690 PF01523 Putative modulator of DNA gyrase PLS229_02715 PF03466 LysR substrate binding domain PLS229_02715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PLS229_02720 PF03358 NADPH-dependent FMN reductase PLS229_02730 PF00107 Zinc-binding dehydrogenase PLS229_02730 PF08240 Alcohol dehydrogenase GroES-like domain PLS229_02745 PF00248 Aldo/keto reductase family PLS229_02760 PF12804 MobA-like NTP transferase domain PLS229_02760 PF14602 Hexapeptide repeat of succinyl-transferase PLS229_02760 PF00132 Bacterial transferase hexapeptide (six repeats) PLS229_02770 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain PLS229_02770 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain PLS229_02775 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PLS229_02775 PF02874 ATP synthase alpha/beta family, beta-barrel domain PLS229_02780 PF00231 ATP synthase PLS229_02785 PF02874 ATP synthase alpha/beta family, beta-barrel domain PLS229_02785 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PLS229_02785 PF00306 ATP synthase alpha/beta chain, C terminal domain PLS229_02790 PF00213 ATP synthase delta (OSCP) subunit PLS229_02795 PF00430 ATP synthase B/B' CF(0) PLS229_02800 PF00137 ATP synthase subunit C PLS229_02805 PF00119 ATP synthase A chain PLS229_02815 PF00338 Ribosomal protein S10p/S20e PLS229_02820 PF00297 Ribosomal protein L3 PLS229_02825 PF00573 Ribosomal protein L4/L1 family PLS229_02830 PF00276 Ribosomal protein L23 PLS229_02835 PF00181 Ribosomal Proteins L2, RNA binding domain PLS229_02835 PF03947 Ribosomal Proteins L2, C-terminal domain PLS229_02840 PF00203 Ribosomal protein S19 PLS229_02845 PF00237 Ribosomal protein L22p/L17e PLS229_02850 PF00189 Ribosomal protein S3, C-terminal domain PLS229_02850 PF07650 KH domain PLS229_02855 PF00252 Ribosomal protein L16p/L10e PLS229_02860 PF00831 Ribosomal L29 protein PLS229_02865 PF00366 Ribosomal protein S17 PLS229_02870 PF00238 Ribosomal protein L14p/L23e PLS229_02875 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 PLS229_02875 PF00467 KOW motif PLS229_02880 PF00281 Ribosomal protein L5 PLS229_02880 PF00673 ribosomal L5P family C-terminus PLS229_02885 PF00253 Ribosomal protein S14p/S29e PLS229_02890 PF00410 Ribosomal protein S8 PLS229_02895 PF00347 Ribosomal protein L6 PLS229_02900 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast PLS229_02905 PF00333 Ribosomal protein S5, N-terminal domain PLS229_02905 PF03719 Ribosomal protein S5, C-terminal domain PLS229_02910 PF00327 Ribosomal protein L30p/L7e PLS229_02915 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A PLS229_02920 PF00344 SecY translocase PLS229_02925 PF00416 Ribosomal protein S13/S18 PLS229_02930 PF00411 Ribosomal protein S11 PLS229_02935 PF00163 Ribosomal protein S4/S9 N-terminal domain PLS229_02935 PF01479 S4 domain PLS229_02940 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain PLS229_02940 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain PLS229_02940 PF01000 RNA polymerase Rpb3/RpoA insert domain PLS229_02945 PF01196 Ribosomal protein L17 PLS229_02950 PF04380 Membrane fusogenic activity PLS229_02955 PF13335 Magnesium chelatase, subunit ChlI C-terminal PLS229_02955 PF01078 Magnesium chelatase, subunit ChlI PLS229_02975 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain PLS229_02975 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain PLS229_02975 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain PLS229_02990 PF05698 Bacterial trigger factor protein (TF) C-terminus PLS229_02990 PF05697 Bacterial trigger factor protein (TF) PLS229_02995 PF00574 Clp protease PLS229_03000 PF06689 ClpX C4-type zinc finger PLS229_03000 PF10431 C-terminal, D2-small domain, of ClpB protein PLS229_03000 PF07724 AAA domain (Cdc48 subfamily) PLS229_03005 PF02190 ATP-dependent protease La (LON) substrate-binding domain PLS229_03005 PF05362 Lon protease (S16) C-terminal proteolytic domain PLS229_03005 PF00004 ATPase family associated with various cellular activities (AAA) PLS229_03010 PF00216 Bacterial DNA-binding protein PLS229_03035 PF03477 ATP cone domain PLS229_03035 PF02867 Ribonucleotide reductase, barrel domain PLS229_03035 PF00317 Ribonucleotide reductase, all-alpha domain PLS229_03040 PF00268 Ribonucleotide reductase, small chain PLS229_03065 PF01479 S4 domain PLS229_03065 PF00849 RNA pseudouridylate synthase PLS229_03070 PF13419 Haloacid dehalogenase-like hydrolase PLS229_03080 PF00830 Ribosomal L28 family PLS229_03085 PF00471 Ribosomal protein L33 PLS229_03090 PF13396 Phospholipase_D-nuclease N-terminal PLS229_03090 PF13091 PLD-like domain PLS229_03105 PF07963 Prokaryotic N-terminal methylation motif PLS229_03105 PF00114 Pilin (bacterial filament) PLS229_03145 PF00959 Phage lysozyme PLS229_03165 PF01555 DNA methylase PLS229_03185 PF00043 Glutathione S-transferase, C-terminal domain PLS229_03185 PF02798 Glutathione S-transferase, N-terminal domain PLS229_03190 PF00056 lactate/malate dehydrogenase, NAD binding domain PLS229_03190 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain PLS229_03195 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD PLS229_03215 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PLS229_03215 PF00529 HlyD membrane-fusion protein of T1SS PLS229_03240 PF03412 Peptidase C39 family PLS229_03240 PF00664 ABC transporter transmembrane region PLS229_03240 PF00005 ABC transporter PLS229_03245 PF01061 ABC-2 type transporter PLS229_03250 PF00005 ABC transporter PLS229_03255 PF05567 Neisseria PilC beta-propeller domain PLS229_03270 PF04408 Helicase associated domain (HA2) PLS229_03270 PF00271 Helicase conserved C-terminal domain PLS229_03270 PF08482 ATP-dependent helicase C-terminal PLS229_03270 PF00270 DEAD/DEAH box helicase PLS229_03280 PF13185 GAF domain PLS229_03285 PF17243 POTRA domain TamA domain 1 PLS229_03285 PF01103 Surface antigen PLS229_03290 PF04357 TamB, inner membrane protein subunit of TAM complex PLS229_03305 PF00285 Citrate synthase, C-terminal domain PLS229_03310 PF00330 Aconitase family (aconitate hydratase) PLS229_03310 PF00694 Aconitase C-terminal domain PLS229_03315 PF04303 PrpF protein PLS229_03335 PF01835 MG2 domain PLS229_03335 PF17962 Bacterial macroglobulin domain 6 PLS229_03335 PF00207 Alpha-2-macroglobulin family PLS229_03335 PF07703 Alpha-2-macroglobulin bait region domain PLS229_03335 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain PLS229_03335 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain PLS229_03335 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain PLS229_03335 PF11974 Bacterial alpha-2-macroglobulin MG3 domain PLS229_03340 PF02583 Metal-sensitive transcriptional repressor PLS229_03345 PF03824 High-affinity nickel-transport protein PLS229_03350 PF07859 alpha/beta hydrolase fold PLS229_03355 PF12852 Cupin PLS229_03355 PF12833 Helix-turn-helix domain PLS229_03370 PF01447 Thermolysin metallopeptidase, catalytic domain PLS229_03370 PF02868 Thermolysin metallopeptidase, alpha-helical domain PLS229_03370 PF16485 Protealysin propeptide PLS229_03375 PF00929 Exonuclease PLS229_03380 PF05552 Conserved TM helix PLS229_03380 PF00924 Mechanosensitive ion channel PLS229_03385 PF02896 PEP-utilising enzyme, TIM barrel domain PLS229_03385 PF00391 PEP-utilising enzyme, mobile domain PLS229_03385 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PLS229_03390 PF03618 Kinase/pyrophosphorylase PLS229_03410 PF04286 Protein of unknown function (DUF445) PLS229_03425 PF04359 Protein of unknown function (DUF493) PLS229_03430 PF03099 Biotin/lipoate A/B protein ligase family PLS229_03435 PF04055 Radical SAM superfamily PLS229_03435 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family PLS229_03460 PF03471 Transporter associated domain PLS229_03460 PF01595 Cyclin M transmembrane N-terminal domain PLS229_03460 PF00571 CBS domain PLS229_03475 PF00986 DNA gyrase B subunit, carboxyl terminus PLS229_03475 PF00204 DNA gyrase B PLS229_03475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PLS229_03475 PF01751 Toprim domain PLS229_03485 PF06418 CTP synthase N-terminus PLS229_03485 PF00117 Glutamine amidotransferase class-I PLS229_03490 PF00793 DAHP synthetase I family PLS229_03495 PF00113 Enolase, C-terminal TIM barrel domain PLS229_03495 PF03952 Enolase, N-terminal domain PLS229_03500 PF04977 Septum formation initiator PLS229_03505 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase PLS229_03510 PF02542 YgbB family PLS229_03515 PF01713 Smr domain PLS229_03540 PF03886 ABC-type transport auxiliary lipoprotein component PLS229_03540 PF02470 MlaD protein PLS229_03545 PF00005 ABC transporter PLS229_03550 PF02405 Permease MlaE PLS229_03620 PF04085 rod shape-determining protein MreC PLS229_03625 PF04093 rod shape-determining protein MreD PLS229_03630 PF03717 Penicillin-binding Protein dimerisation domain PLS229_03630 PF00905 Penicillin binding protein transpeptidase domain PLS229_03635 PF01098 Cell cycle protein PLS229_03640 PF02547 Queuosine biosynthesis protein PLS229_03645 PF04607 Region found in RelA / SpoT proteins PLS229_03645 PF13291 ACT domain PLS229_03645 PF02824 TGS domain PLS229_03660 PF03776 Septum formation topological specificity factor MinE PLS229_03665 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain PLS229_03670 PF03775 Septum formation inhibitor MinC, C-terminal domain PLS229_03670 PF05209 Septum formation inhibitor MinC, N-terminal domain PLS229_03690 PF00730 HhH-GPD superfamily base excision DNA repair protein PLS229_03700 PF01292 Prokaryotic cytochrome b561 PLS229_03705 PF04264 YceI-like domain PLS229_03710 PF00512 His Kinase A (phospho-acceptor) domain PLS229_03710 PF09308 LuxQ, periplasmic PLS229_03710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PLS229_03710 PF00072 Response regulator receiver domain PLS229_03720 PF01208 Uroporphyrinogen decarboxylase (URO-D) PLS229_03725 PF01761 3-dehydroquinate synthase PLS229_03730 PF01202 Shikimate kinase PLS229_03735 PF01243 Pyridoxamine 5'-phosphate oxidase PLS229_03735 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region PLS229_03745 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain PLS229_03745 PF00749 tRNA synthetases class I (E and Q), catalytic domain PLS229_03755 PF03932 CutC family PLS229_03775 PF00528 Binding-protein-dependent transport system inner membrane component PLS229_03780 PF00528 Binding-protein-dependent transport system inner membrane component PLS229_03785 PF12857 TOBE-like domain PLS229_03785 PF00005 ABC transporter PLS229_03825 PF01381 Helix-turn-helix PLS229_03905 PF10065 Uncharacterized conserved protein (DUF2303) PLS229_03930 PF03979 Sigma-70 factor, region 1.1 PLS229_03930 PF04546 Sigma-70, non-essential region PLS229_03930 PF04545 Sigma-70, region 4 PLS229_03930 PF00140 Sigma-70 factor, region 1.2 PLS229_03930 PF04542 Sigma-70 region 2 PLS229_03930 PF04539 Sigma-70 region 3 PLS229_03935 PF00521 DNA gyrase/topoisomerase IV, subunit A PLS229_03935 PF03989 DNA gyrase C-terminal domain, beta-propeller PLS229_03945 PF02321 Outer membrane efflux protein PLS229_03950 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PLS229_03950 PF00529 HlyD membrane-fusion protein of T1SS PLS229_03955 PF07690 Major Facilitator Superfamily PLS229_03960 PF12697 Alpha/beta hydrolase family PLS229_03965 PF00155 Aminotransferase class I and II PLS229_03975 PF01040 UbiA prenyltransferase family PLS229_03980 PF00753 Metallo-beta-lactamase superfamily PLS229_03985 PF12627 Probable RNA and SrmB- binding site of polymerase A PLS229_03985 PF01966 HD domain PLS229_03985 PF01743 Poly A polymerase head domain PLS229_03990 PF14718 Soluble lytic murein transglycosylase L domain PLS229_03990 PF01464 Transglycosylase SLT domain PLS229_04000 PF02666 Phosphatidylserine decarboxylase PLS229_04060 PF17831 Pyruvate dehydrogenase E1 component middle domain PLS229_04060 PF00456 Transketolase, thiamine diphosphate binding domain PLS229_04065 PF00698 Acyl transferase domain PLS229_04075 PF00550 Phosphopantetheine attachment site PLS229_04080 PF02801 Beta-ketoacyl synthase, C-terminal domain PLS229_04080 PF00109 Beta-ketoacyl synthase, N-terminal domain PLS229_04085 PF00425 chorismate binding enzyme PLS229_04085 PF04715 Anthranilate synthase component I, N terminal region PLS229_04090 PF02618 YceG-like family PLS229_04095 PF09115 DNA polymerase III, delta subunit, C terminal PLS229_04115 PF00459 Inositol monophosphatase family PLS229_04120 PF00588 SpoU rRNA Methylase family PLS229_04125 PF04055 Radical SAM superfamily PLS229_04130 PF01132 Elongation factor P (EF-P) OB domain PLS229_04130 PF08207 Elongation factor P (EF-P) KOW-like domain PLS229_04130 PF09285 Elongation factor P, C-terminal PLS229_04135 PF01979 Amidohydrolase family PLS229_04145 PF13419 Haloacid dehalogenase-like hydrolase PLS229_04155 PF00561 alpha/beta hydrolase fold PLS229_04160 PF08534 Redoxin PLS229_04195 PF00155 Aminotransferase class I and II PLS229_04200 PF00795 Carbon-nitrogen hydrolase PLS229_04210 PF00849 RNA pseudouridylate synthase PLS229_04210 PF01479 S4 domain PLS229_04215 PF04079 Segregation and condensation complex subunit ScpB PLS229_04220 PF02616 Segregation and condensation protein ScpA PLS229_04250 PF00528 Binding-protein-dependent transport system inner membrane component PLS229_04255 PF00528 Binding-protein-dependent transport system inner membrane component PLS229_04270 PF00795 Carbon-nitrogen hydrolase PLS229_04275 PF04371 Porphyromonas-type peptidyl-arginine deiminase PLS229_04285 PF00444 Ribosomal protein L36 PLS229_04290 PF02224 Cytidylate kinase PLS229_04295 PF00575 S1 RNA binding domain PLS229_04300 PF00216 Bacterial DNA-binding protein PLS229_04310 PF18073 Rubredoxin metal binding domain PLS229_04315 PF00953 Glycosyl transferase family 4 PLS229_04320 PF02719 Polysaccharide biosynthesis protein PLS229_04325 PF00483 Nucleotidyl transferase PLS229_04330 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain PLS229_04330 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain PLS229_04335 PF00571 CBS domain PLS229_04335 PF00478 IMP dehydrogenase / GMP reductase domain PLS229_04340 PF02540 NAD synthase PLS229_04340 PF00958 GMP synthase C terminal domain PLS229_04340 PF00117 Glutamine amidotransferase class-I PLS229_04395 PF17760 UvrA interaction domain PLS229_04395 PF00005 ABC transporter PLS229_04395 PF17755 UvrA DNA-binding domain PLS229_04400 PF00829 Ribosomal prokaryotic L21 protein PLS229_04405 PF01016 Ribosomal L27 protein PLS229_04410 PF01926 50S ribosome-binding GTPase PLS229_04410 PF01018 GTP1/OBG PLS229_04415 PF01649 Ribosomal protein S20 PLS229_04420 PF03023 Lipid II flippase MurJ PLS229_04425 PF06574 FAD synthetase PLS229_04425 PF01687 Riboflavin kinase PLS229_04430 PF00133 tRNA synthetases class I (I, L, M and V) PLS229_04430 PF08264 Anticodon-binding domain of tRNA PLS229_04430 PF06827 Zinc finger found in FPG and IleRS PLS229_04435 PF01252 Signal peptidase (SPase) II PLS229_04440 PF02401 LytB protein PLS229_04495 PF13087 AAA domain PLS229_04495 PF13091 PLD-like domain PLS229_04500 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) PLS229_04500 PF06594 Haemolysin-type calcium binding protein related domain PLS229_04565 PF00664 ABC transporter transmembrane region PLS229_04565 PF00005 ABC transporter PLS229_04565 PF03412 Peptidase C39 family PLS229_04570 PF00155 Aminotransferase class I and II PLS229_04575 PF01522 Polysaccharide deacetylase PLS229_04580 PF00462 Glutaredoxin PLS229_04590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PLS229_04590 PF03466 LysR substrate binding domain PLS229_04600 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PLS229_04620 PF00107 Zinc-binding dehydrogenase PLS229_04620 PF08240 Alcohol dehydrogenase GroES-like domain PLS229_04625 PF08240 Alcohol dehydrogenase GroES-like domain PLS229_04625 PF00107 Zinc-binding dehydrogenase PLS229_04645 PF00873 AcrB/AcrD/AcrF family PLS229_04650 PF00873 AcrB/AcrD/AcrF family PLS229_04655 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PLS229_04660 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term PLS229_04660 PF14489 QueF-like protein PLS229_04675 PF00330 Aconitase family (aconitate hydratase) PLS229_04680 PF00694 Aconitase C-terminal domain PLS229_04685 PF00180 Isocitrate/isopropylmalate dehydrogenase PLS229_04700 PF02397 Bacterial sugar transferase PLS229_04715 PF00534 Glycosyl transferases group 1 PLS229_04715 PF13439 Glycosyltransferase Family 4 PLS229_04725 PF01943 Polysaccharide biosynthesis protein PLS229_04740 PF00486 Transcriptional regulatory protein, C terminal PLS229_04740 PF00072 Response regulator receiver domain PLS229_04745 PF05958 tRNA (Uracil-5-)-methyltransferase PLS229_04750 PF01928 CYTH domain PLS229_04755 PF00933 Glycosyl hydrolase family 3 N terminal domain PLS229_04765 PF01048 Phosphorylase superfamily PLS229_04770 PF00313 'Cold-shock' DNA-binding domain PLS229_04780 PF01668 SmpB protein PLS229_04790 PF03658 RnfH family Ubiquitin PLS229_04795 PF04355 SmpA / OmlA family PLS229_04800 PF01475 Ferric uptake regulator family PLS229_04805 PF02463 RecF/RecN/SMC N terminal domain PLS229_04810 PF01628 HrcA protein C terminal domain PLS229_04810 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding PLS229_04815 PF01025 GrpE PLS229_04820 PF00012 Hsp70 protein PLS229_04825 PF00226 DnaJ domain PLS229_04825 PF01556 DnaJ C terminal domain PLS229_04825 PF00684 DnaJ central domain PLS229_04835 PF00072 Response regulator receiver domain PLS229_04835 PF00486 Transcriptional regulatory protein, C terminal PLS229_04840 PF01219 Prokaryotic diacylglycerol kinase PLS229_04845 PF01790 Prolipoprotein diacylglyceryl transferase PLS229_04850 PF00303 Thymidylate synthase PLS229_04855 PF00186 Dihydrofolate reductase PLS229_04865 PF00072 Response regulator receiver domain PLS229_04865 PF00486 Transcriptional regulatory protein, C terminal PLS229_04870 PF13493 Domain of unknown function (DUF4118) PLS229_04870 PF13492 GAF domain PLS229_04870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PLS229_04870 PF02702 Osmosensitive K+ channel His kinase sensor domain PLS229_04870 PF00512 His Kinase A (phospho-acceptor) domain PLS229_04875 PF02669 K+-transporting ATPase, c chain PLS229_04885 PF03814 Potassium-transporting ATPase A subunit PLS229_04900 PF00149 Calcineurin-like phosphoesterase PLS229_04905 PF04379 ApaG domain PLS229_04910 PF00398 Ribosomal RNA adenine dimethylase PLS229_04915 PF00929 Exonuclease PLS229_04920 PF01895 PhoU domain PLS229_04925 PF00005 ABC transporter PLS229_04930 PF00528 Binding-protein-dependent transport system inner membrane component PLS229_04935 PF00528 Binding-protein-dependent transport system inner membrane component PLS229_04940 PF12849 PBP superfamily domain PLS229_04945 PF02254 TrkA-N domain PLS229_04945 PF00999 Sodium/hydrogen exchanger family PLS229_04950 PF00593 TonB dependent receptor PLS229_04950 PF07715 TonB-dependent Receptor Plug Domain PLS229_04955 PF01323 DSBA-like thioredoxin domain PLS229_04965 PF00005 ABC transporter PLS229_04965 PF12848 ABC transporter PLS229_04980 PF01066 CDP-alcohol phosphatidyltransferase PLS229_04985 PF02151 UvrB/uvrC motif PLS229_04985 PF01541 GIY-YIG catalytic domain PLS229_04985 PF08459 UvrC Helix-hairpin-helix N-terminal PLS229_04990 PF01451 Low molecular weight phosphotyrosine protein phosphatase PLS229_04995 PF02348 Cytidylyltransferase PLS229_05000 PF10609 NUBPL iron-transfer P-loop NTPase PLS229_05005 PF00202 Aminotransferase class-III PLS229_05015 PF00490 Delta-aminolevulinic acid dehydratase PLS229_05025 PF12146 Serine aminopeptidase, S33 PLS229_05030 PF01614 Bacterial transcriptional regulator PLS229_05030 PF09339 IclR helix-turn-helix domain PLS229_05040 PF01134 Glucose inhibited division protein A PLS229_05040 PF13932 GidA associated domain PLS229_05060 PF13649 Methyltransferase domain PLS229_05080 PF02649 Type I GTP cyclohydrolase folE2 PLS229_05085 PF00132 Bacterial transferase hexapeptide (six repeats) PLS229_05090 PF00873 AcrB/AcrD/AcrF family PLS229_05095 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PLS229_05095 PF00529 HlyD membrane-fusion protein of T1SS PLS229_05100 PF05088 Bacterial NAD-glutamate dehydrogenase PLS229_05105 PF01513 ATP-NAD kinase PLS229_05125 PF12706 Beta-lactamase superfamily domain PLS229_05135 PF08411 Exonuclease C-terminal PLS229_05135 PF00929 Exonuclease PLS229_05150 PF00999 Sodium/hydrogen exchanger family PLS229_05160 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) PLS229_05170 PF01812 5-formyltetrahydrofolate cyclo-ligase family PLS229_05190 PF03695 Uncharacterised protein family (UPF0149) PLS229_05195 PF00557 Metallopeptidase family M24 PLS229_05195 PF05195 Aminopeptidase P, N-terminal domain PLS229_05200 PF00293 NUDIX domain PLS229_05235 PF01063 Amino-transferase class IV PLS229_05250 PF02954 Bacterial regulatory protein, Fis family PLS229_05260 PF01381 Helix-turn-helix PLS229_05275 PF00535 Glycosyl transferase family 2 PLS229_05285 PF00925 GTP cyclohydrolase II PLS229_05295 PF08534 Redoxin PLS229_05320 PF00959 Phage lysozyme PLS229_05365 PF00114 Pilin (bacterial filament) PLS229_05365 PF07963 Prokaryotic N-terminal methylation motif PLS229_05380 PF00753 Metallo-beta-lactamase superfamily PLS229_05380 PF16123 Hydroxyacylglutathione hydrolase C-terminus PLS229_05390 PF00075 RNase H PLS229_05395 PF00929 Exonuclease PLS229_05415 PF01075 Glycosyltransferase family 9 (heptosyltransferase) PLS229_05425 PF13632 Glycosyl transferase family group 2 PLS229_05430 PF02230 Phospholipase/Carboxylesterase PLS229_05435 PF06580 Histidine kinase PLS229_05435 PF07694 5TMR of 5TMR-LYT PLS229_05440 PF00072 Response regulator receiver domain PLS229_05440 PF04397 LytTr DNA-binding domain PLS229_05445 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain PLS229_05445 PF03900 Porphobilinogen deaminase, C-terminal domain PLS229_05460 PF00437 Type II/IV secretion system protein PLS229_05465 PF00437 Type II/IV secretion system protein PLS229_05480 PF00535 Glycosyl transferase family 2 PLS229_05490 PF00109 Beta-ketoacyl synthase, N-terminal domain PLS229_05490 PF02801 Beta-ketoacyl synthase, C-terminal domain PLS229_05505 PF09924 Uncharacterised conserved protein (DUF2156) PLS229_05505 PF03706 Lysylphosphatidylglycerol synthase TM region PLS229_05510 PF01042 Endoribonuclease L-PSP PLS229_05525 PF01430 Hsp33 protein PLS229_05530 PF00912 Transglycosylase PLS229_05535 PF00488 MutS domain V PLS229_05535 PF05190 MutS family domain IV PLS229_05535 PF01624 MutS domain I PLS229_05535 PF05192 MutS domain III PLS229_05535 PF05188 MutS domain II PLS229_05540 PF01168 Alanine racemase, N-terminal domain PLS229_05555 PF02237 Biotin protein ligase C terminal domain PLS229_05555 PF08279 HTH domain PLS229_05555 PF03099 Biotin/lipoate A/B protein ligase family PLS229_05560 PF03309 Type III pantothenate kinase PLS229_05595 PF01183 Glycosyl hydrolases family 25 PLS229_05615 PF01381 Helix-turn-helix PLS229_05625 PF07963 Prokaryotic N-terminal methylation motif PLS229_05625 PF00114 Pilin (bacterial filament) PLS229_05725 PF00589 Phage integrase family PLS229_05740 PF00959 Phage lysozyme PLS229_05755 PF00574 Clp protease PLS229_05795 PF01022 Bacterial regulatory protein, arsR family PLS229_05810 PF00873 AcrB/AcrD/AcrF family PLS229_05835 PF00581 Rhodanese-like domain PLS229_05840 PF02556 Preprotein translocase subunit SecB PLS229_05845 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus PLS229_05845 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus PLS229_05870 PF12169 DNA polymerase III subunits gamma and tau domain III PLS229_05870 PF12170 DNA polymerase III tau subunit V interacting with alpha PLS229_05875 PF02575 YbaB/EbfC DNA-binding family PLS229_05880 PF13662 Toprim domain PLS229_05880 PF02132 RecR protein PLS229_05885 PF01230 HIT domain PLS229_05895 PF01841 Transglutaminase-like superfamily PLS229_05895 PF13559 Domain of unknown function (DUF4129) PLS229_05895 PF11992 Domain of unknown function (DUF3488) PLS229_05905 PF07726 ATPase family associated with various cellular activities (AAA) PLS229_05905 PF17863 AAA lid domain PLS229_05915 PF02620 Large ribosomal RNA subunit accumulation protein YceD PLS229_05920 PF01783 Ribosomal L32p protein family PLS229_05925 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III PLS229_05925 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal PLS229_05940 PF01341 Glycosyl hydrolases family 6 PLS229_05940 PF00041 Fibronectin type III domain PLS229_05940 PF00553 Cellulose binding domain PLS229_05945 PF08502 LeuA allosteric (dimerisation) domain PLS229_05945 PF00682 HMGL-like PLS229_05950 PF00291 Pyridoxal-phosphate dependent enzyme PLS229_05960 PF00205 Thiamine pyrophosphate enzyme, central domain PLS229_05960 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PLS229_05960 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PLS229_05965 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain PLS229_05965 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain PLS229_05970 PF03572 Peptidase family S41 PLS229_05970 PF17804 Tail specific protease N-terminal domain PLS229_05970 PF00595 PDZ domain PLS229_05970 PF11818 C-terminal domain of tail specific protease (DUF3340) PLS229_05975 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family PLS229_05980 PF02566 OsmC-like protein PLS229_05985 PF03969 AFG1-like ATPase PLS229_05990 PF02129 X-Pro dipeptidyl-peptidase (S15 family) PLS229_05995 PF02492 CobW/HypB/UreG, nucleotide-binding domain PLS229_05995 PF07683 Cobalamin synthesis protein cobW C-terminal domain PLS229_06005 PF00551 Formyl transferase PLS229_06015 PF03109 ABC1 family PLS229_06025 PF07055 Enoyl reductase FAD binding domain PLS229_06025 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase PLS229_06025 PF12241 Trans-2-enoyl-CoA reductase catalytic region PLS229_06045 PF00881 Nitroreductase family PLS229_06050 PF04264 YceI-like domain PLS229_06055 PF02673 Bacitracin resistance protein BacA PLS229_06060 PF03951 Glutamine synthetase, beta-Grasp domain PLS229_06060 PF00120 Glutamine synthetase, catalytic domain PLS229_06065 PF00543 Nitrogen regulatory protein P-II PLS229_06070 PF00909 Ammonium Transporter Family PLS229_06085 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain PLS229_06085 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain PLS229_06090 PF00890 FAD binding domain PLS229_06090 PF02910 Fumarate reductase flavoprotein C-term PLS229_06095 PF02445 Quinolinate synthetase A protein PLS229_06100 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain PLS229_06100 PF02777 Iron/manganese superoxide dismutases, C-terminal domain PLS229_06105 PF01026 TatD related DNase PLS229_06140 PF00448 SRP54-type protein, GTPase domain PLS229_06140 PF02881 SRP54-type protein, helical bundle domain PLS229_06145 PF14815 NUDIX domain PLS229_06145 PF00730 HhH-GPD superfamily base excision DNA repair protein PLS229_06145 PF00633 Helix-hairpin-helix motif PLS229_06150 PF04362 Bacterial Fe(2+) trafficking PLS229_06160 PF01709 Transcriptional regulator PLS229_06165 PF02075 Crossover junction endodeoxyribonuclease RuvC PLS229_06170 PF07499 RuvA, C-terminal domain PLS229_06170 PF01330 RuvA N terminal domain PLS229_06175 PF02705 K+ potassium transporter PLS229_06180 PF05496 Holliday junction DNA helicase RuvB P-loop domain PLS229_06180 PF17864 RuvB AAA lid domain PLS229_06180 PF05491 RuvB C-terminal winged helix domain PLS229_06185 PF03061 Thioesterase superfamily PLS229_06190 PF01618 MotA/TolQ/ExbB proton channel family PLS229_06195 PF02472 Biopolymer transport protein ExbD/TolR PLS229_06205 PF07676 WD40-like Beta Propeller Repeat PLS229_06205 PF04052 TolB amino-terminal domain PLS229_06210 PF00691 OmpA family PLS229_06220 PF04055 Radical SAM superfamily PLS229_06225 PF00300 Histidine phosphatase superfamily (branch 1) PLS229_06230 PF04493 Endonuclease V PLS229_06235 PF00854 POT family PLS229_06240 PF00255 Glutathione peroxidase PLS229_06245 PF00970 Oxidoreductase FAD-binding domain PLS229_06245 PF00175 Oxidoreductase NAD-binding domain PLS229_06250 PF13667 ThiC-associated domain PLS229_06250 PF01964 Radical SAM ThiC family PLS229_06255 PF10459 Peptidase S46 PLS229_06260 PF00300 Histidine phosphatase superfamily (branch 1) PLS229_06270 PF01850 PIN domain PLS229_06345 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ PLS229_06350 PF04221 RelB antitoxin PLS229_06425 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system PLS229_06485 PF06508 Queuosine biosynthesis protein QueC PLS229_06490 PF01336 OB-fold nucleic acid binding domain PLS229_06490 PF02938 GAD domain PLS229_06490 PF00152 tRNA synthetases class II (D, K and N) PLS229_06510 PF05681 Fumarate hydratase (Fumerase) PLS229_06510 PF05683 Fumarase C-terminus PLS229_06530 PF01648 4'-phosphopantetheinyl transferase superfamily PLS229_06535 PF02527 rRNA small subunit methyltransferase G PLS229_06540 PF02780 Transketolase, C-terminal domain PLS229_06540 PF02779 Transketolase, pyrimidine binding domain PLS229_06540 PF00456 Transketolase, thiamine diphosphate binding domain PLS229_06545 PF00375 Sodium:dicarboxylate symporter family PLS229_06555 PF01625 Peptide methionine sulfoxide reductase PLS229_06570 PF01432 Peptidase family M3 PLS229_06575 PF06903 VirK protein PLS229_06580 PF08245 Mur ligase middle domain PLS229_06580 PF02875 Mur ligase family, glutamate ligase domain PLS229_06595 PF00156 Phosphoribosyl transferase domain PLS229_06605 PF00072 Response regulator receiver domain PLS229_06605 PF01339 CheB methylesterase PLS229_06610 PF01627 Hpt domain PLS229_06610 PF01584 CheW-like domain PLS229_06610 PF02895 Signal transducing histidine kinase, homodimeric domain PLS229_06610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PLS229_06610 PF00072 Response regulator receiver domain PLS229_06615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PLS229_06615 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term PLS229_06620 PF01584 CheW-like domain PLS229_06625 PF00072 Response regulator receiver domain PLS229_06630 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain PLS229_06630 PF02951 Prokaryotic glutathione synthetase, N-terminal domain PLS229_06645 PF02092 Glycyl-tRNA synthetase beta subunit PLS229_06645 PF05746 DALR anticodon binding domain PLS229_06650 PF02091 Glycyl-tRNA synthetase alpha subunit PLS229_06655 PF00795 Carbon-nitrogen hydrolase PLS229_06655 PF02540 NAD synthase PLS229_06675 PF03692 Putative zinc- or iron-chelating domain PLS229_06685 PF00561 alpha/beta hydrolase fold PLS229_06695 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal PLS229_06695 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III PLS229_06705 PF00588 SpoU rRNA Methylase family PLS229_06715 PF01808 AICARFT/IMPCHase bienzyme PLS229_06715 PF02142 MGS-like domain PLS229_06720 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain PLS229_06720 PF02843 Phosphoribosylglycinamide synthetase, C domain PLS229_06720 PF02844 Phosphoribosylglycinamide synthetase, N domain PLS229_06740 PF12805 FUSC-like inner membrane protein yccS PLS229_06750 PF03186 CobD/Cbib protein PLS229_06755 PF05662 Coiled stalk of trimeric autotransporter adhesin PLS229_06755 PF05658 Head domain of trimeric autotransporter adhesin PLS229_06755 PF03895 YadA-like membrane anchor domain PLS229_06760 PF01227 GTP cyclohydrolase I PLS229_06770 PF00132 Bacterial transferase hexapeptide (six repeats) PLS229_06775 PF08032 RNA 2'-O ribose methyltransferase substrate binding PLS229_06775 PF00588 SpoU rRNA Methylase family PLS229_06780 PF08461 Ribonuclease R winged-helix domain PLS229_06780 PF00575 S1 RNA binding domain PLS229_06780 PF08206 Ribonuclease B OB domain PLS229_06780 PF17876 Cold shock domain PLS229_06780 PF00773 RNB domain PLS229_06785 PF10548 P22AR C-terminal domain PLS229_06785 PF02498 BRO family, N-terminal domain PLS229_06790 PF00959 Phage lysozyme PLS229_06850 PF17674 HHH domain PLS229_06850 PF00575 S1 RNA binding domain PLS229_06850 PF16921 Tex protein YqgF-like domain PLS229_06850 PF09371 Tex-like protein N-terminal domain PLS229_06860 PF07690 Major Facilitator Superfamily PLS229_06865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PLS229_06865 PF03466 LysR substrate binding domain PLS229_06880 PF01161 Phosphatidylethanolamine-binding protein PLS229_06885 PF00719 Inorganic pyrophosphatase PLS229_06890 PF00085 Thioredoxin PLS229_06900 PF13603 Leucyl-tRNA synthetase, Domain 2 PLS229_06900 PF08264 Anticodon-binding domain of tRNA PLS229_06900 PF00133 tRNA synthetases class I (I, L, M and V) PLS229_06915 PF01467 Cytidylyltransferase-like PLS229_06930 PF13406 Transglycosylase SLT domain PLS229_06935 PF03330 Lytic transglycolase PLS229_06935 PF05036 Sporulation related domain PLS229_07070 PF04829 Pre-toxin domain with VENN motif PLS229_07070 PF13332 Hemagglutinin repeat PLS229_07070 PF05860 haemagglutination activity domain PLS229_07075 PF13018 Extended Signal Peptide of Type V secretion system PLS229_07075 PF13332 Hemagglutinin repeat PLS229_07075 PF05860 haemagglutination activity domain PLS229_07075 PF04829 Pre-toxin domain with VENN motif PLS229_07175 PF15605 Bacterial toxin 28 PLS229_07175 PF05860 haemagglutination activity domain PLS229_07175 PF15605 Bacterial toxin 28 PLS229_07175 PF04829 Pre-toxin domain with VENN motif PLS229_07175 PF04829 Pre-toxin domain with VENN motif PLS229_07175 PF05860 haemagglutination activity domain PLS229_07175 PF13332 Hemagglutinin repeat PLS229_07175 PF13332 Hemagglutinin repeat PLS229_07180 PF13332 Hemagglutinin repeat PLS229_07180 PF05860 haemagglutination activity domain PLS229_07180 PF04829 Pre-toxin domain with VENN motif PLS229_07180 PF13018 Extended Signal Peptide of Type V secretion system PLS229_07205 PF01810 LysE type translocator PLS229_07225 PF08207 Elongation factor P (EF-P) KOW-like domain PLS229_07225 PF01132 Elongation factor P (EF-P) OB domain PLS229_07225 PF09285 Elongation factor P, C-terminal PLS229_07230 PF02913 FAD linked oxidases, C-terminal domain PLS229_07230 PF01565 FAD binding domain PLS229_07235 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PLS229_07235 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PLS229_07235 PF01842 ACT domain PLS229_07240 PF13520 Amino acid permease PLS229_07245 PF13520 Amino acid permease PLS229_07250 PF00596 Class II Aldolase and Adducin N-terminal domain PLS229_07255 PF03079 ARD/ARD' family PLS229_07285 PF01502 Phosphoribosyl-AMP cyclohydrolase PLS229_07285 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase PLS229_07290 PF00977 Histidine biosynthesis protein PLS229_07295 PF00977 Histidine biosynthesis protein PLS229_07300 PF00117 Glutamine amidotransferase class-I PLS229_07305 PF00475 Imidazoleglycerol-phosphate dehydratase PLS229_07310 PF00155 Aminotransferase class I and II PLS229_07315 PF00815 Histidinol dehydrogenase PLS229_07320 PF01634 ATP phosphoribosyltransferase PLS229_07320 PF08029 HisG, C-terminal domain PLS229_07335 PF03129 Anticodon binding domain PLS229_07335 PF13393 Histidyl-tRNA synthetase PLS229_07340 PF00291 Pyridoxal-phosphate dependent enzyme PLS229_07340 PF14821 Threonine synthase N terminus PLS229_07345 PF08544 GHMP kinases C terminal PLS229_07345 PF00288 GHMP kinases N terminal domain PLS229_07350 PF00742 Homoserine dehydrogenase PLS229_07350 PF03447 Homoserine dehydrogenase, NAD binding domain PLS229_07350 PF00696 Amino acid kinase family PLS229_07350 PF01842 ACT domain PLS229_07350 PF13840 ACT domain PLS229_07360 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain PLS229_07360 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain PLS229_07365 PF03652 Holliday junction resolvase PLS229_07370 PF02622 Uncharacterized ACR, COG1678 PLS229_07375 PF07943 Penicillin-binding protein 5, C-terminal domain PLS229_07375 PF00768 D-alanyl-D-alanine carboxypeptidase PLS229_07380 PF00141 Peroxidase PLS229_07385 PF01556 DnaJ C terminal domain PLS229_07385 PF00226 DnaJ domain PLS229_07395 PF06832 Penicillin-Binding Protein C-terminus Family PLS229_07395 PF00912 Transglycosylase PLS229_07395 PF00905 Penicillin binding protein transpeptidase domain PLS229_07400 PF07715 TonB-dependent Receptor Plug Domain PLS229_07400 PF00593 TonB dependent receptor PLS229_07425 PF08281 Sigma-70, region 4 PLS229_07425 PF04542 Sigma-70 region 2 PLS229_07435 PF13180 PDZ domain PLS229_07440 PF03144 Elongation factor Tu domain 2 PLS229_07440 PF00679 Elongation factor G C-terminus PLS229_07440 PF00009 Elongation factor Tu GTP binding domain PLS229_07440 PF06421 GTP-binding protein LepA C-terminus PLS229_07445 PF10502 Signal peptidase, peptidase S26 PLS229_07455 PF14622 Ribonuclease-III-like PLS229_07455 PF00035 Double-stranded RNA binding motif PLS229_07460 PF07650 KH domain PLS229_07460 PF01926 50S ribosome-binding GTPase PLS229_07465 PF02565 Recombination protein O C terminal PLS229_07465 PF11967 Recombination protein O N terminal PLS229_07470 PF13292 1-deoxy-D-xylulose-5-phosphate synthase PLS229_07470 PF02780 Transketolase, C-terminal domain PLS229_07470 PF02779 Transketolase, pyrimidine binding domain PLS229_07480 PF00474 Sodium:solute symporter family PLS229_07490 PF13193 AMP-binding enzyme C-terminal domain PLS229_07490 PF00501 AMP-binding enzyme PLS229_07490 PF16177 Acetyl-coenzyme A synthetase N-terminus PLS229_07495 PF02659 Putative manganese efflux pump PLS229_07500 PF00106 short chain dehydrogenase PLS229_07515 PF13360 PQQ-like domain PLS229_07520 PF07676 WD40-like Beta Propeller Repeat PLS229_07520 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region PLS229_07520 PF00326 Prolyl oligopeptidase family PLS229_07525 PF03169 OPT oligopeptide transporter protein PLS229_07530 PF01266 FAD dependent oxidoreductase PLS229_07530 PF16901 C-terminal domain of alpha-glycerophosphate oxidase PLS229_07535 PF00230 Major intrinsic protein PLS229_07540 PF02782 FGGY family of carbohydrate kinases, C-terminal domain PLS229_07540 PF00370 FGGY family of carbohydrate kinases, N-terminal domain PLS229_07550 PF01263 Aldose 1-epimerase PLS229_07555 PF08267 Cobalamin-independent synthase, N-terminal domain PLS229_07555 PF01717 Cobalamin-independent synthase, Catalytic domain PLS229_07560 PF02677 Epoxyqueuosine reductase QueH PLS229_07570 PF00501 AMP-binding enzyme PLS229_07580 PF00535 Glycosyl transferase family 2 PLS229_07585 PF01370 NAD dependent epimerase/dehydratase family PLS229_07590 PF17762 HTH domain found in ParB protein PLS229_07590 PF02195 ParB-like nuclease domain PLS229_07595 PF13614 AAA domain PLS229_07610 PF02403 Seryl-tRNA synthetase N-terminal domain PLS229_07610 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PLS229_07615 PF03544 Gram-negative bacterial TonB protein C-terminal PLS229_07620 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) PLS229_07625 PF00800 Prephenate dehydratase PLS229_07625 PF01842 ACT domain PLS229_07625 PF01817 Chorismate mutase type II PLS229_07630 PF00266 Aminotransferase class-V PLS229_07640 PF12679 ABC-2 family transporter protein PLS229_07645 PF00005 ABC transporter PLS229_07675 PF00440 Bacterial regulatory proteins, tetR family PLS229_07680 PF01209 ubiE/COQ5 methyltransferase family PLS229_07690 PF00294 pfkB family carbohydrate kinase PLS229_07695 PF07690 Major Facilitator Superfamily PLS229_07705 PF04102 SlyX PLS229_07710 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain PLS229_07710 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain PLS229_07710 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain PLS229_07715 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase PLS229_07715 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PLS229_07720 PF00255 Glutathione peroxidase PLS229_07730 PF00005 ABC transporter PLS229_07745 PF10415 Fumarase C C-terminus PLS229_07745 PF00206 Lyase PLS229_07750 PF00206 Lyase PLS229_07750 PF08328 Adenylosuccinate lyase C-terminal PLS229_07755 PF08007 Cupin superfamily protein PLS229_07760 PF16078 2-oxoglutarate dehydrogenase N-terminus PLS229_07760 PF00676 Dehydrogenase E1 component PLS229_07760 PF02779 Transketolase, pyrimidine binding domain PLS229_07760 PF16870 2-oxoglutarate dehydrogenase C-terminal PLS229_07765 PF00364 Biotin-requiring enzyme PLS229_07765 PF02817 e3 binding domain PLS229_07765 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) PLS229_07775 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PLS229_07775 PF07992 Pyridine nucleotide-disulphide oxidoreductase PLS229_07785 PF00899 ThiF family PLS229_07800 PF00027 Cyclic nucleotide-binding domain PLS229_07800 PF00325 Bacterial regulatory proteins, crp family PLS229_07805 PF02675 S-adenosylmethionine decarboxylase PLS229_07810 PF03232 Ubiquinone biosynthesis protein COQ7 PLS229_07815 PF00572 Ribosomal protein L13 PLS229_07820 PF00380 Ribosomal protein S9/S16 PLS229_07825 PF00285 Citrate synthase, C-terminal domain PLS229_07830 PF01197 Ribosomal protein L31 PLS229_07835 PF00814 Glycoprotease family PLS229_07840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PLS229_07840 PF03466 LysR substrate binding domain PLS229_07845 PF13192 Thioredoxin domain PLS229_07845 PF07992 Pyridine nucleotide-disulphide oxidoreductase PLS229_07850 PF00578 AhpC/TSA family PLS229_07850 PF10417 C-terminal domain of 1-Cys peroxiredoxin PLS229_07855 PF03895 YadA-like membrane anchor domain PLS229_07855 PF13018 Extended Signal Peptide of Type V secretion system PLS229_07855 PF05662 Coiled stalk of trimeric autotransporter adhesin PLS229_07855 PF05658 Head domain of trimeric autotransporter adhesin PLS229_07860 PF00263 Bacterial type II and III secretion system protein PLS229_07860 PF03958 Bacterial type II/III secretion system short domain PLS229_07870 PF10741 Type II secretion system (T2SS), protein M subtype b PLS229_07875 PF05137 Fimbrial assembly protein (PilN) PLS229_07880 PF03934 Type II secretion system (T2SS), protein K PLS229_07895 PF03934 Type II secretion system (T2SS), protein K PLS229_07905 PF07963 Prokaryotic N-terminal methylation motif PLS229_07910 PF12019 Type II transport protein GspH PLS229_07915 PF08334 Type II secretion system (T2SS), protein G PLS229_07920 PF00482 Type II secretion system (T2SS), protein F PLS229_07925 PF00437 Type II/IV secretion system protein PLS229_07925 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain PLS229_07945 PF05175 Methyltransferase small domain PLS229_07945 PF17827 PrmC N-terminal domain PLS229_07955 PF00561 alpha/beta hydrolase fold PLS229_07970 PF06969 HemN C-terminal domain PLS229_07970 PF04055 Radical SAM superfamily PLS229_07975 PF01725 Ham1 family PLS229_07980 PF03725 3' exoribonuclease family, domain 2 PLS229_07980 PF01138 3' exoribonuclease family, domain 1 PLS229_07985 PF03755 YicC-like family, N-terminal region PLS229_07985 PF08340 Domain of unknown function (DUF1732) PLS229_07990 PF00625 Guanylate kinase PLS229_07995 PF01192 RNA polymerase Rpb6 PLS229_08000 PF00009 Elongation factor Tu GTP binding domain PLS229_08005 PF01507 Phosphoadenosine phosphosulfate reductase family PLS229_08010 PF00667 FAD binding domain PLS229_08010 PF00258 Flavodoxin PLS229_08010 PF00175 Oxidoreductase NAD-binding domain PLS229_08015 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain PLS229_08015 PF01077 Nitrite and sulphite reductase 4Fe-4S domain PLS229_08020 PF01507 Phosphoadenosine phosphosulfate reductase family PLS229_08045 PF13369 Transglutaminase-like superfamily PLS229_08070 PF11838 ERAP1-like C-terminal domain PLS229_08070 PF01433 Peptidase family M1 domain PLS229_08075 PF01209 ubiE/COQ5 methyltransferase family PLS229_08085 PF10431 C-terminal, D2-small domain, of ClpB protein PLS229_08085 PF00004 ATPase family associated with various cellular activities (AAA) PLS229_08085 PF07724 AAA domain (Cdc48 subfamily) PLS229_08090 PF00227 Proteasome subunit PLS229_08100 PF02899 Phage integrase, N-terminal SAM-like domain PLS229_08100 PF00589 Phage integrase family PLS229_08110 PF01678 Diaminopimelate epimerase PLS229_08120 PF00326 Prolyl oligopeptidase family PLS229_08120 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain PLS229_08130 PF02082 Transcriptional regulator PLS229_08135 PF01458 Uncharacterized protein family (UPF0051) PLS229_08140 PF00005 ABC transporter PLS229_08145 PF01458 Uncharacterized protein family (UPF0051) PLS229_08150 PF00266 Aminotransferase class-V PLS229_08155 PF00355 Rieske [2Fe-2S] domain PLS229_08160 PF13439 Glycosyltransferase Family 4 PLS229_08160 PF00534 Glycosyl transferases group 1 PLS229_08165 PF01522 Polysaccharide deacetylase PLS229_08170 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PLS229_08170 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PLS229_08170 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PLS229_08170 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain PLS229_08175 PF17848 Acetyl-coA carboxylase zinc finger domain PLS229_08175 PF01039 Carboxyl transferase domain PLS229_08195 PF01979 Amidohydrolase family PLS229_08200 PF01380 SIS domain PLS229_08210 PF07690 Major Facilitator Superfamily PLS229_08220 PF02685 Glucokinase PLS229_08245 PF00512 His Kinase A (phospho-acceptor) domain PLS229_08245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PLS229_08260 PF02537 CrcB-like protein, Camphor Resistance (CrcB) PLS229_08265 PF16193 AAA C-terminal domain PLS229_08265 PF12002 MgsA AAA+ ATPase C terminal PLS229_08265 PF00004 ATPase family associated with various cellular activities (AAA) PLS229_08270 PF03548 Outer membrane lipoprotein carrier protein LolA PLS229_08285 PF13491 4TM region of DNA translocase FtsK/SpoIIIE PLS229_08285 PF17854 FtsK alpha domain PLS229_08285 PF01580 FtsK/SpoIIIE family PLS229_08285 PF09397 Ftsk gamma domain PLS229_08290 PF07992 Pyridine nucleotide-disulphide oxidoreductase PLS229_08300 PF03588 Leucyl/phenylalanyl-tRNA protein transferase PLS229_08305 PF01176 Translation initiation factor 1A / IF-1 PLS229_08310 PF17871 AAA lid domain PLS229_08310 PF10431 C-terminal, D2-small domain, of ClpB protein PLS229_08310 PF07724 AAA domain (Cdc48 subfamily) PLS229_08310 PF02861 Clp amino terminal domain, pathogenicity island component PLS229_08310 PF00004 ATPase family associated with various cellular activities (AAA) PLS229_08315 PF02617 ATP-dependent Clp protease adaptor protein ClpS PLS229_08320 PF00293 NUDIX domain PLS229_08330 PF04356 Protein of unknown function (DUF489) PLS229_08345 PF01323 DSBA-like thioredoxin domain PLS229_08355 PF01926 50S ribosome-binding GTPase PLS229_08360 PF04107 Glutamate-cysteine ligase family 2(GCS2) PLS229_08370 PF00202 Aminotransferase class-III PLS229_08375 PF00520 Ion transport protein PLS229_08375 PF00027 Cyclic nucleotide-binding domain PLS229_08380 PF02899 Phage integrase, N-terminal SAM-like domain PLS229_08380 PF00589 Phage integrase family PLS229_08385 PF13098 Thioredoxin-like domain PLS229_08385 PF10411 Disulfide bond isomerase protein N-terminus PLS229_08390 PF02769 AIR synthase related protein, C-terminal domain PLS229_08390 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain PLS229_08390 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal PLS229_08400 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) PLS229_08405 PF01722 BolA-like protein PLS229_08410 PF00571 CBS domain PLS229_08410 PF01380 SIS domain PLS229_08430 PF12399 Branched-chain amino acid ATP-binding cassette transporter PLS229_08430 PF00005 ABC transporter PLS229_08435 PF04963 Sigma-54 factor, core binding domain PLS229_08435 PF00309 Sigma-54 factor, Activator interacting domain (AID) PLS229_08435 PF04552 Sigma-54, DNA binding domain PLS229_08440 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein PLS229_08445 PF07475 HPr Serine kinase C-terminal domain PLS229_08445 PF02603 HPr Serine kinase N terminus PLS229_08450 PF03668 P-loop ATPase protein family PLS229_08460 PF00381 PTS HPr component phosphorylation site PLS229_08465 PF02896 PEP-utilising enzyme, TIM barrel domain PLS229_08465 PF05524 PEP-utilising enzyme, N-terminal PLS229_08465 PF00391 PEP-utilising enzyme, mobile domain PLS229_08470 PF00571 CBS domain PLS229_08470 PF01769 Divalent cation transporter PLS229_08470 PF03448 MgtE intracellular N domain PLS229_08475 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PLS229_08510 PF08281 Sigma-70, region 4 PLS229_08510 PF04542 Sigma-70 region 2 PLS229_08520 PF00082 Subtilase family PLS229_08530 PF00436 Single-strand binding protein family PLS229_08535 PF00348 Polyprenyl synthetase PLS229_08540 PF06481 COX Aromatic Rich Motif PLS229_08540 PF00116 Cytochrome C oxidase subunit II, periplasmic domain PLS229_08545 PF00115 Cytochrome C and Quinol oxidase polypeptide I PLS229_08550 PF00510 Cytochrome c oxidase subunit III PLS229_08555 PF03626 Prokaryotic Cytochrome C oxidase subunit IV PLS229_08560 PF02347 Glycine cleavage system P-protein PLS229_08570 PF00271 Helicase conserved C-terminal domain PLS229_08570 PF04408 Helicase associated domain (HA2) PLS229_08570 PF11898 Domain of unknown function (DUF3418) PLS229_08570 PF00270 DEAD/DEAH box helicase PLS229_08570 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold PLS229_08575 PF00210 Ferritin-like domain PLS229_08580 PF16124 RecQ zinc-binding PLS229_08580 PF00270 DEAD/DEAH box helicase PLS229_08580 PF00570 HRDC domain PLS229_08580 PF00271 Helicase conserved C-terminal domain PLS229_08580 PF09382 RQC domain PLS229_08600 PF00296 Luciferase-like monooxygenase PLS229_08605 PF18073 Rubredoxin metal binding domain PLS229_08620 PF00290 Tryptophan synthase alpha chain PLS229_08625 PF00291 Pyridoxal-phosphate dependent enzyme PLS229_08630 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase PLS229_08635 PF01416 tRNA pseudouridine synthase PLS229_08645 PF02774 Semialdehyde dehydrogenase, dimerisation domain PLS229_08645 PF01118 Semialdehyde dehydrogenase, NAD binding domain PLS229_08655 PF01264 Chorismate synthase PLS229_08660 PF05175 Methyltransferase small domain PLS229_08725 PF00348 Polyprenyl synthetase PLS229_08730 PF02609 Exonuclease VII small subunit PLS229_08735 PF09179 TilS substrate binding domain PLS229_08735 PF11734 TilS substrate C-terminal domain PLS229_08735 PF01171 PP-loop family PLS229_08745 PF00375 Sodium:dicarboxylate symporter family PLS229_08750 PF00877 NlpC/P60 family PLS229_08755 PF00877 NlpC/P60 family PLS229_08760 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PLS229_08765 PF04235 Protein of unknown function (DUF418) PLS229_08790 PF00633 Helix-hairpin-helix motif PLS229_08790 PF00730 HhH-GPD superfamily base excision DNA repair protein PLS229_08790 PF10576 Iron-sulfur binding domain of endonuclease III PLS229_08805 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PLS229_08805 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase PLS229_08810 PF00293 NUDIX domain PLS229_08835 PF01488 Shikimate / quinate 5-dehydrogenase PLS229_08835 PF18317 Shikimate 5'-dehydrogenase C-terminal domain PLS229_08835 PF08501 Shikimate dehydrogenase substrate binding domain PLS229_08840 PF08543 Phosphomethylpyrimidine kinase PLS229_08840 PF02581 Thiamine monophosphate synthase PLS229_08860 PF02683 Cytochrome C biogenesis protein transmembrane region PLS229_08860 PF11412 Disulphide bond corrector protein DsbC PLS229_08865 PF03091 CutA1 divalent ion tolerance protein PLS229_08870 PF00166 Chaperonin 10 Kd subunit PLS229_08875 PF00118 TCP-1/cpn60 chaperonin family PLS229_08900 PF01370 NAD dependent epimerase/dehydratase family PLS229_08905 PF01370 NAD dependent epimerase/dehydratase family PLS229_08910 PF16363 GDP-mannose 4,6 dehydratase PLS229_08925 PF00291 Pyridoxal-phosphate dependent enzyme PLS229_08945 PF00593 TonB dependent receptor PLS229_08945 PF07715 TonB-dependent Receptor Plug Domain PLS229_08950 PF13640 2OG-Fe(II) oxygenase superfamily PLS229_08950 PF18331 PKHD-type hydroxylase C-terminal domain PLS229_08970 PF02424 ApbE family PLS229_08975 PF00258 Flavodoxin PLS229_08975 PF00175 Oxidoreductase NAD-binding domain PLS229_08975 PF00667 FAD binding domain PLS229_08985 PF01636 Phosphotransferase enzyme family PLS229_08990 PF00483 Nucleotidyl transferase PLS229_08995 PF00308 Bacterial dnaA protein PLS229_09000 PF01594 AI-2E family transporter PLS229_09010 PF02769 AIR synthase related protein, C-terminal domain PLS229_09010 PF00586 AIR synthase related protein, N-terminal domain PLS229_09015 PF00551 Formyl transferase PLS229_09030 PF02223 Thymidylate kinase PLS229_09035 PF01431 Peptidase family M13 PLS229_09035 PF05649 Peptidase family M13 PLS229_09040 PF07977 FabA-like domain PLS229_09045 PF01171 PP-loop family PLS229_09050 PF04381 Putative exonuclease, RdgC PLS229_09060 PF00762 Ferrochelatase PLS229_09070 PF02416 mttA/Hcf106 family PLS229_09075 PF02416 mttA/Hcf106 family PLS229_09080 PF00902 Sec-independent protein translocase protein (TatC) PLS229_09090 PF02540 NAD synthase PLS229_09090 PF00117 Glutamine amidotransferase class-I PLS229_09090 PF00958 GMP synthase C terminal domain PLS229_09095 PF00127 Copper binding proteins, plastocyanin/azurin family PLS229_09100 PF03193 RsgA GTPase PLS229_09105 PF02021 Uncharacterised protein family UPF0102 PLS229_09110 PF04348 LppC putative lipoprotein PLS229_09115 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PLS229_09120 PF00593 TonB dependent receptor PLS229_09120 PF07715 TonB-dependent Receptor Plug Domain PLS229_09125 PF09334 tRNA synthetases class I (M) PLS229_09125 PF01588 Putative tRNA binding domain PLS229_09135 PF04060 Putative Fe-S cluster PLS229_09180 PF07687 Peptidase dimerisation domain PLS229_09180 PF01546 Peptidase family M20/M25/M40 PLS229_09205 PF05567 Neisseria PilC beta-propeller domain PLS229_09230 PF11892 Domain of unknown function (DUF3412) PLS229_09230 PF03641 Possible lysine decarboxylase PLS229_09230 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases PLS229_09235 PF00563 EAL domain PLS229_09235 PF12792 CSS motif domain associated with EAL PLS229_09245 PF00899 ThiF family PLS229_09250 PF01926 50S ribosome-binding GTPase PLS229_09250 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal PLS229_09255 PF13360 PQQ-like domain PLS229_09255 PF01011 PQQ enzyme repeat PLS229_09275 PF04055 Radical SAM superfamily PLS229_09280 PF00334 Nucleoside diphosphate kinase PLS229_09285 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain PLS229_09285 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PLS229_09290 PF00709 Adenylosuccinate synthetase PLS229_09300 PF01145 SPFH domain / Band 7 family PLS229_09305 PF01145 SPFH domain / Band 7 family PLS229_09305 PF12221 Bacterial membrane protein N terminal PLS229_09310 PF08240 Alcohol dehydrogenase GroES-like domain PLS229_09310 PF00107 Zinc-binding dehydrogenase PLS229_09315 PF00072 Response regulator receiver domain PLS229_09330 PF04073 Aminoacyl-tRNA editing domain PLS229_09330 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PLS229_09330 PF03129 Anticodon binding domain PLS229_09340 PF01066 CDP-alcohol phosphatidyltransferase PLS229_09350 PF00583 Acetyltransferase (GNAT) family PLS229_09365 PF00933 Glycosyl hydrolase family 3 N terminal domain PLS229_09365 PF01915 Glycosyl hydrolase family 3 C-terminal domain PLS229_09365 PF14310 Fibronectin type III-like domain PLS229_09370 PF00924 Mechanosensitive ion channel PLS229_09375 PF02152 Dihydroneopterin aldolase PLS229_09380 PF00814 Glycoprotease family PLS229_09385 PF01165 Ribosomal protein S21 PLS229_09390 PF09424 Yqey-like protein PLS229_09395 PF03631 Virulence factor BrkB PLS229_09400 PF01807 CHC2 zinc finger PLS229_09400 PF08275 DNA primase catalytic core, N-terminal domain PLS229_09400 PF10410 DnaB-helicase binding domain of primase PLS229_09400 PF08278 DNA primase DnaG DnaB-binding PLS229_09410 PF00579 tRNA synthetases class I (W and Y) PLS229_09415 PF13538 UvrD-like helicase C-terminal domain PLS229_09420 PF12705 PD-(D/E)XK nuclease superfamily PLS229_09420 PF00580 UvrD/REP helicase N-terminal domain PLS229_09420 PF13361 UvrD-like helicase C-terminal domain PLS229_09425 PF17946 RecC C-terminal domain PLS229_09430 PF00005 ABC transporter PLS229_09435 PF02405 Permease MlaE PLS229_09440 PF02470 MlaD protein PLS229_09445 PF05494 MlaC protein PLS229_09455 PF04333 MlaA lipoprotein PLS229_09460 PF02646 RmuC family PLS229_09465 PF00005 ABC transporter PLS229_09480 PF13520 Amino acid permease PLS229_09490 PF10672 S-adenosylmethionine-dependent methyltransferase PLS229_09490 PF17785 PUA-like domain PLS229_09495 PF03741 Integral membrane protein TerC family PLS229_09510 PF01521 Iron-sulphur cluster biosynthesis PLS229_09525 PF00486 Transcriptional regulatory protein, C terminal PLS229_09525 PF00072 Response regulator receiver domain PLS229_09535 PF00210 Ferritin-like domain PLS229_09560 PF02773 S-adenosylmethionine synthetase, C-terminal domain PLS229_09560 PF02772 S-adenosylmethionine synthetase, central domain PLS229_09560 PF00438 S-adenosylmethionine synthetase, N-terminal domain PLS229_09570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PLS229_09570 PF08918 PhoQ Sensor PLS229_09575 PF00072 Response regulator receiver domain PLS229_09575 PF00486 Transcriptional regulatory protein, C terminal PLS229_09585 PF01207 Dihydrouridine synthase (Dus) PLS229_09590 PF00593 TonB dependent receptor PLS229_09590 PF07715 TonB-dependent Receptor Plug Domain PLS229_09605 PF02861 Clp amino terminal domain, pathogenicity island component PLS229_09605 PF10431 C-terminal, D2-small domain, of ClpB protein PLS229_09605 PF17871 AAA lid domain PLS229_09605 PF00004 ATPase family associated with various cellular activities (AAA) PLS229_09605 PF07724 AAA domain (Cdc48 subfamily) PLS229_09615 PF00301 Rubredoxin PLS229_09620 PF02581 Thiamine monophosphate synthase PLS229_09635 PF00067 Cytochrome P450 PLS229_09665 PF03796 DnaB-like helicase C terminal domain PLS229_09665 PF00772 DnaB-like helicase N terminal domain PLS229_09670 PF05736 OprF membrane domain PLS229_09670 PF00691 OmpA family PLS229_09680 PF00248 Aldo/keto reductase family PLS229_09685 PF00912 Transglycosylase PLS229_09685 PF00905 Penicillin binding protein transpeptidase domain PLS229_09685 PF17092 Penicillin-binding protein OB-like domain PLS229_09710 PF03958 Bacterial type II/III secretion system short domain PLS229_09710 PF00263 Bacterial type II and III secretion system protein PLS229_09710 PF07660 Secretin and TonB N terminus short domain PLS229_09710 PF11741 AMIN domain PLS229_09720 PF00884 Sulfatase PLS229_09720 PF08019 Phosphoethanolamine transferase EptA/EptB PLS229_09725 PF00067 Cytochrome P450 PLS229_09730 PF00270 DEAD/DEAH box helicase PLS229_09730 PF00271 Helicase conserved C-terminal domain PLS229_09730 PF17191 RecG wedge domain PLS229_09735 PF01042 Endoribonuclease L-PSP PLS229_09740 PF02824 TGS domain PLS229_09740 PF04607 Region found in RelA / SpoT proteins PLS229_09740 PF13291 ACT domain PLS229_09750 PF02913 FAD linked oxidases, C-terminal domain PLS229_09750 PF01565 FAD binding domain PLS229_09755 PF00691 OmpA family PLS229_09755 PF05736 OprF membrane domain PLS229_09760 PF02600 Disulfide bond formation protein DsbB PLS229_09765 PF07715 TonB-dependent Receptor Plug Domain PLS229_09765 PF00593 TonB dependent receptor PLS229_09770 PF02590 Predicted SPOUT methyltransferase PLS229_09785 PF00271 Helicase conserved C-terminal domain PLS229_09785 PF04851 Type III restriction enzyme, res subunit PLS229_09785 PF17757 UvrB interaction domain PLS229_09785 PF12344 Ultra-violet resistance protein B PLS229_09785 PF02151 UvrB/uvrC motif PLS229_09800 PF00701 Dihydrodipicolinate synthetase family PLS229_09810 PF00578 AhpC/TSA family PLS229_09815 PF02562 PhoH-like protein PLS229_09815 PF13638 PIN domain PLS229_09840 PF00586 AIR synthase related protein, N-terminal domain PLS229_09840 PF02769 AIR synthase related protein, C-terminal domain PLS229_09845 PF01029 NusB family PLS229_09850 PF00885 6,7-dimethyl-8-ribityllumazine synthase PLS229_09855 PF00925 GTP cyclohydrolase II PLS229_09855 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase PLS229_09860 PF00677 Lumazine binding domain PLS229_09865 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region PLS229_09865 PF01872 RibD C-terminal domain PLS229_09875 PF03477 ATP cone domain PLS229_09885 PF00464 Serine hydroxymethyltransferase PLS229_09890 PF12848 ABC transporter PLS229_09890 PF00005 ABC transporter PLS229_09895 PF06039 Malate:quinone oxidoreductase (Mqo) PLS229_09900 PF04134 Protein of unknown function, DUF393 PLS229_09910 PF00849 RNA pseudouridylate synthase PLS229_09910 PF01479 S4 domain PLS229_09915 PF13525 Outer membrane lipoprotein PLS229_09925 PF02421 Ferrous iron transport protein B PLS229_09925 PF07664 Ferrous iron transport protein B C terminus PLS229_09925 PF07670 Nucleoside recognition PLS229_09940 PF04386 Stringent starvation protein B PLS229_09945 PF02798 Glutathione S-transferase, N-terminal domain PLS229_09945 PF00043 Glutathione S-transferase, C-terminal domain PLS229_09965 PF01464 Transglycosylase SLT domain PLS229_09970 PF04055 Radical SAM superfamily PLS229_09970 PF01938 TRAM domain PLS229_09970 PF00919 Uncharacterized protein family UPF0004 PLS229_09975 PF02562 PhoH-like protein PLS229_09980 PF02130 Uncharacterized protein family UPF0054 PLS229_09990 PF00571 CBS domain PLS229_09990 PF03471 Transporter associated domain PLS229_10020 PF04829 Pre-toxin domain with VENN motif PLS229_10020 PF05860 haemagglutination activity domain PLS229_10020 PF13332 Hemagglutinin repeat PLS229_10025 PF04829 Pre-toxin domain with VENN motif PLS229_10025 PF05860 haemagglutination activity domain PLS229_10025 PF13018 Extended Signal Peptide of Type V secretion system PLS229_10025 PF13332 Hemagglutinin repeat PLS229_10030 PF17287 POTRA domain PLS229_10030 PF08479 POTRA domain, ShlB-type PLS229_10030 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB PLS229_10040 PF00521 DNA gyrase/topoisomerase IV, subunit A PLS229_10040 PF03989 DNA gyrase C-terminal domain, beta-propeller PLS229_10045 PF01008 Initiation factor 2 subunit family PLS229_10055 PF00152 tRNA synthetases class II (D, K and N) PLS229_10060 PF00583 Acetyltransferase (GNAT) family PLS229_10065 PF12826 Helix-hairpin-helix motif PLS229_10065 PF03120 NAD-dependent DNA ligase OB-fold domain PLS229_10065 PF01653 NAD-dependent DNA ligase adenylation domain PLS229_10065 PF00533 BRCA1 C Terminus (BRCT) domain PLS229_10065 PF03119 NAD-dependent DNA ligase C4 zinc finger domain PLS229_10075 PF04354 ZipA, C-terminal FtsZ-binding domain PLS229_10080 PF02463 RecF/RecN/SMC N terminal domain PLS229_10085 PF01281 Ribosomal protein L9, N-terminal domain PLS229_10085 PF03948 Ribosomal protein L9, C-terminal domain PLS229_10090 PF01084 Ribosomal protein S18 PLS229_10095 PF01250 Ribosomal protein S6 PLS229_10100 PF01521 Iron-sulphur cluster biosynthesis PLS229_10105 PF00152 tRNA synthetases class II (D, K and N) PLS229_10105 PF01336 OB-fold nucleic acid binding domain PLS229_10110 PF01061 ABC-2 type transporter PLS229_10115 PF00005 ABC transporter PLS229_10125 PF01180 Dihydroorotate dehydrogenase PLS229_10130 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain PLS229_10130 PF01565 FAD binding domain PLS229_10135 PF00892 EamA-like transporter family PLS229_10140 PF01569 PAP2 superfamily PLS229_10145 PF04551 GcpE protein PLS229_10155 PF00072 Response regulator receiver domain PLS229_10160 PF00889 Elongation factor TS PLS229_10165 PF00318 Ribosomal protein S2 PLS229_10180 PF00664 ABC transporter transmembrane region PLS229_10180 PF00005 ABC transporter PLS229_10200 PF02321 Outer membrane efflux protein PLS229_10205 PF12850 Calcineurin-like phosphoesterase superfamily domain PLS229_10210 PF02541 Ppx/GppA phosphatase family PLS229_10215 PF13089 Polyphosphate kinase N-terminal domain PLS229_10215 PF02503 Polyphosphate kinase middle domain PLS229_10215 PF17941 Polyphosphate kinase C-terminal domain 1 PLS229_10215 PF13090 Polyphosphate kinase C-terminal domain 2 PLS229_10220 PF11808 Phosphate regulon sensor protein PhoR PLS229_10220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PLS229_10220 PF00512 His Kinase A (phospho-acceptor) domain PLS229_10220 PF00989 PAS fold PLS229_10225 PF00072 Response regulator receiver domain PLS229_10225 PF00486 Transcriptional regulatory protein, C terminal PLS229_10230 PF13181 Tetratricopeptide repeat PLS229_10230 PF01435 Peptidase family M48 PLS229_10235 PF00462 Glutaredoxin PLS229_10240 PF00180 Isocitrate/isopropylmalate dehydrogenase PLS229_10250 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain PLS229_10250 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain PLS229_10260 PF00037 4Fe-4S binding domain PLS229_10260 PF11953 Domain of unknown function (DUF3470) PLS229_10270 PF01106 NifU-like domain PLS229_10275 PF01329 Pterin 4 alpha carbinolamine dehydratase PLS229_10290 PF00849 RNA pseudouridylate synthase PLS229_10290 PF01479 S4 domain PLS229_10295 PF12111 Polyribonucleotide phosphorylase C terminal PLS229_10295 PF00575 S1 RNA binding domain PLS229_10295 PF10150 Ribonuclease E/G family PLS229_10300 PF00072 Response regulator receiver domain PLS229_10300 PF00196 Bacterial regulatory proteins, luxR family PLS229_10315 PF02777 Iron/manganese superoxide dismutases, C-terminal domain PLS229_10315 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain PLS229_10320 PF00545 ribonuclease PLS229_10335 PF02696 Uncharacterized ACR, YdiU/UPF0061 family PLS229_10340 PF00313 'Cold-shock' DNA-binding domain PLS229_10350 PF01435 Peptidase family M48 PLS229_10355 PF03144 Elongation factor Tu domain 2 PLS229_10355 PF03143 Elongation factor Tu C-terminal domain PLS229_10355 PF00009 Elongation factor Tu GTP binding domain PLS229_10360 PF00679 Elongation factor G C-terminus PLS229_10360 PF14492 Elongation Factor G, domain II PLS229_10360 PF03764 Elongation factor G, domain IV PLS229_10360 PF00009 Elongation factor Tu GTP binding domain PLS229_10360 PF03144 Elongation factor Tu domain 2 PLS229_10365 PF00177 Ribosomal protein S7p/S5e PLS229_10370 PF00164 Ribosomal protein S12/S23 PLS229_10375 PF04997 RNA polymerase Rpb1, domain 1 PLS229_10375 PF04998 RNA polymerase Rpb1, domain 5 PLS229_10375 PF05000 RNA polymerase Rpb1, domain 4 PLS229_10375 PF04983 RNA polymerase Rpb1, domain 3 PLS229_10375 PF00623 RNA polymerase Rpb1, domain 2 PLS229_10380 PF04561 RNA polymerase Rpb2, domain 2 PLS229_10380 PF04563 RNA polymerase beta subunit PLS229_10380 PF04565 RNA polymerase Rpb2, domain 3 PLS229_10380 PF04560 RNA polymerase Rpb2, domain 7 PLS229_10380 PF00562 RNA polymerase Rpb2, domain 6 PLS229_10380 PF10385 RNA polymerase beta subunit external 1 domain PLS229_10385 PF16320 Ribosomal protein L7/L12 dimerisation domain PLS229_10385 PF00542 Ribosomal protein L7/L12 C-terminal domain PLS229_10390 PF00466 Ribosomal protein L10 PLS229_10395 PF00687 Ribosomal protein L1p/L10e family PLS229_10400 PF00298 Ribosomal protein L11, RNA binding domain PLS229_10400 PF03946 Ribosomal protein L11, N-terminal domain PLS229_10405 PF00467 KOW motif PLS229_10405 PF02357 Transcription termination factor nusG PLS229_10410 PF00584 SecE/Sec61-gamma subunits of protein translocation complex PLS229_10420 PF00009 Elongation factor Tu GTP binding domain PLS229_10420 PF03144 Elongation factor Tu domain 2 PLS229_10420 PF03143 Elongation factor Tu C-terminal domain PLS229_10440 PF01926 50S ribosome-binding GTPase PLS229_10440 PF06071 Protein of unknown function (DUF933) PLS229_10445 PF01195 Peptidyl-tRNA hydrolase PLS229_10450 PF01386 Ribosomal L25p family PLS229_10450 PF14693 Ribosomal protein TL5, C-terminal domain PLS229_10455 PF14572 Phosphoribosyl synthetase-associated domain PLS229_10455 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase PLS229_10465 PF08544 GHMP kinases C terminal PLS229_10465 PF00288 GHMP kinases N terminal domain PLS229_10470 PF03550 Outer membrane lipoprotein LolB PLS229_10480 PF01488 Shikimate / quinate 5-dehydrogenase PLS229_10480 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain PLS229_10480 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain PLS229_10485 PF00472 RF-1 domain PLS229_10485 PF03462 PCRF domain PLS229_10495 PF10672 S-adenosylmethionine-dependent methyltransferase PLS229_10495 PF01170 Putative RNA methylase family UPF0020 PLS229_10495 PF02926 THUMP domain PLS229_10560 PF00497 Bacterial extracellular solute-binding proteins, family 3 PLS229_10565 PF00528 Binding-protein-dependent transport system inner membrane component PLS229_10570 PF00005 ABC transporter PLS229_10575 PF00528 Binding-protein-dependent transport system inner membrane component PLS229_10585 PF01914 MarC family integral membrane protein PLS229_10590 PF00462 Glutaredoxin PLS229_10595 PF02222 ATP-grasp domain PLS229_10595 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain PLS229_10600 PF00731 AIR carboxylase PLS229_10620 PF07732 Multicopper oxidase PLS229_10620 PF07731 Multicopper oxidase PLS229_10630 PF13361 UvrD-like helicase C-terminal domain PLS229_10630 PF00580 UvrD/REP helicase N-terminal domain PLS229_10640 PF04349 Periplasmic glucan biosynthesis protein, MdoG PLS229_10645 PF01343 Peptidase family S49 PLS229_10650 PF01554 MatE PLS229_10665 PF00270 DEAD/DEAH box helicase PLS229_10665 PF00271 Helicase conserved C-terminal domain PLS229_10665 PF17764 3′ DNA-binding domain (3′BD) PLS229_10665 PF18074 Primosomal protein N C-terminal domain PLS229_10665 PF18319 PriA DNA helicase Cys-rich region (CRR) domain PLS229_10670 PF04545 Sigma-70, region 4 PLS229_10670 PF00140 Sigma-70 factor, region 1.2 PLS229_10670 PF04542 Sigma-70 region 2 PLS229_10675 PF03167 Uracil DNA glycosylase superfamily PLS229_10680 PF00072 Response regulator receiver domain PLS229_10680 PF01339 CheB methylesterase PLS229_10685 PF18075 FtsX extracellular domain PLS229_10690 PF00005 ABC transporter PLS229_10695 PF00270 DEAD/DEAH box helicase PLS229_10695 PF00271 Helicase conserved C-terminal domain PLS229_10695 PF12300 ATP-dependent RNA helicase RhlB PLS229_10700 PF00085 Thioredoxin PLS229_10705 PF07498 Rho termination factor, N-terminal domain PLS229_10705 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PLS229_10705 PF07497 Rho termination factor, RNA-binding domain PLS229_10710 PF03971 Monomeric isocitrate dehydrogenase PLS229_10720 PF09704 CRISPR-associated protein (Cas_Cas5) PLS229_10740 PF13180 PDZ domain PLS229_10740 PF03572 Peptidase family S41 PLS229_10745 PF01551 Peptidase family M23 PLS229_10755 PF00150 Cellulase (glycosyl hydrolase family 5) PLS229_10770 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster PLS229_10770 PF07992 Pyridine nucleotide-disulphide oxidoreductase PLS229_10775 PF00310 Glutamine amidotransferases class-II PLS229_10775 PF04898 Glutamate synthase central domain PLS229_10775 PF01645 Conserved region in glutamate synthase PLS229_10775 PF01493 GXGXG motif PLS229_10785 PF14748 Pyrroline-5-carboxylate reductase dimerisation PLS229_10785 PF03807 NADP oxidoreductase coenzyme F420-dependent PLS229_10870 PF05860 haemagglutination activity domain PLS229_10870 PF13332 Hemagglutinin repeat PLS229_10870 PF04829 Pre-toxin domain with VENN motif PLS229_10875 PF05860 haemagglutination activity domain PLS229_10875 PF13332 Hemagglutinin repeat PLS229_10875 PF04829 Pre-toxin domain with VENN motif PLS229_10875 PF13018 Extended Signal Peptide of Type V secretion system PLS229_10920 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) PLS229_10920 PF18766 SWI2/SNF2 ATPase PLS229_10920 PF12008 Type I restriction and modification enzyme - subunit R C terminal PLS229_10925 PF01420 Type I restriction modification DNA specificity domain PLS229_10935 PF02384 N-6 DNA Methylase PLS229_10935 PF12161 HsdM N-terminal domain PLS229_11015 PF11867 Domain of unknown function (DUF3387) PLS229_11015 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) PLS229_11015 PF18766 SWI2/SNF2 ATPase PLS229_11020 PF01420 Type I restriction modification DNA specificity domain PLS229_11025 PF02384 N-6 DNA Methylase PLS229_11030 PF02384 N-6 DNA Methylase PLS229_11080 PF06594 Haemolysin-type calcium binding protein related domain PLS229_11080 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) PLS229_11130 PF01638 HxlR-like helix-turn-helix PLS229_11135 PF00106 short chain dehydrogenase PLS229_11155 PF14814 Bifunctional transglycosylase second domain PLS229_11155 PF00905 Penicillin binding protein transpeptidase domain PLS229_11155 PF00912 Transglycosylase PLS229_11165 PF04851 Type III restriction enzyme, res subunit PLS229_11165 PF13307 Helicase C-terminal domain PLS229_11175 PF00484 Carbonic anhydrase PLS229_11180 PF00534 Glycosyl transferases group 1 PLS229_11185 PF01522 Polysaccharide deacetylase PLS229_11195 PF09383 NIL domain PLS229_11195 PF00005 ABC transporter PLS229_11200 PF00528 Binding-protein-dependent transport system inner membrane component PLS229_11205 PF03180 NLPA lipoprotein PLS229_11220 PF00364 Biotin-requiring enzyme PLS229_11220 PF02817 e3 binding domain PLS229_11220 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) PLS229_11225 PF07992 Pyridine nucleotide-disulphide oxidoreductase PLS229_11225 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PLS229_11235 PF01545 Cation efflux family PLS229_11240 PF01053 Cys/Met metabolism PLP-dependent enzyme PLS229_11245 PF00561 alpha/beta hydrolase fold PLS229_11250 PF01551 Peptidase family M23 PLS229_11255 PF01975 Survival protein SurE PLS229_11270 PF01551 Peptidase family M23 PLS229_11270 PF01476 LysM domain PLS229_11280 PF00989 PAS fold PLS229_11280 PF00512 His Kinase A (phospho-acceptor) domain PLS229_11280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PLS229_11280 PF16736 Single Cache-like PLS229_11285 PF00842 Alanine racemase, C-terminal domain PLS229_11285 PF01168 Alanine racemase, N-terminal domain PLS229_11290 PF01266 FAD dependent oxidoreductase PLS229_11300 PF01641 SelR domain PLS229_11310 PF07691 PA14 domain PLS229_11310 PF02838 Glycosyl hydrolase family 20, domain 2 PLS229_11310 PF00728 Glycosyl hydrolase family 20, catalytic domain PLS229_11320 PF14310 Fibronectin type III-like domain PLS229_11320 PF01915 Glycosyl hydrolase family 3 C-terminal domain PLS229_11320 PF00933 Glycosyl hydrolase family 3 N terminal domain PLS229_11320 PF07691 PA14 domain PLS229_11335 PF17678 Glycosyl hydrolase family 92 N-terminal domain PLS229_11335 PF07971 Glycosyl hydrolase family 92 PLS229_11340 PF01301 Glycosyl hydrolases family 35 PLS229_11345 PF04166 Pyridoxal phosphate biosynthetic protein PdxA PLS229_11350 PF09312 SurA N-terminal domain PLS229_11350 PF00639 PPIC-type PPIASE domain PLS229_11355 PF04453 LPS transport system D PLS229_11370 PF01494 FAD binding domain PLS229_11375 PF01494 FAD binding domain PLS229_11380 PF06719 AraC-type transcriptional regulator N-terminus PLS229_11380 PF12833 Helix-turn-helix domain PLS229_11385 PF02525 Flavodoxin-like fold PLS229_11395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PLS229_11395 PF03466 LysR substrate binding domain PLS229_11400 PF14824 Sirohaem biosynthesis protein central PLS229_11400 PF10414 Sirohaem synthase dimerisation region PLS229_11400 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PLS229_11405 PF00291 Pyridoxal-phosphate dependent enzyme PLS229_11415 PF00274 Fructose-bisphosphate aldolase class-I PLS229_11425 PF00224 Pyruvate kinase, barrel domain PLS229_11425 PF02887 Pyruvate kinase, alpha/beta domain PLS229_11430 PF00162 Phosphoglycerate kinase PLS229_11445 PF00749 tRNA synthetases class I (E and Q), catalytic domain PLS229_11450 PF01475 Ferric uptake regulator family PLS229_11465 PF00150 Cellulase (glycosyl hydrolase family 5) PLS229_11465 PF00553 Cellulose binding domain PLS229_11475 PF00675 Insulinase (Peptidase family M16) PLS229_11475 PF05193 Peptidase M16 inactive domain PLS229_11490 PF03330 Lytic transglycolase PLS229_11495 PF02810 SEC-C motif PLS229_11495 PF01043 SecA preprotein cross-linking domain PLS229_11495 PF07517 SecA DEAD-like domain PLS229_11495 PF07516 SecA Wing and Scaffold domain PLS229_11500 PF08525 Opacity-associated protein A N-terminal motif PLS229_11500 PF01551 Peptidase family M23 PLS229_11500 PF01476 LysM domain PLS229_11510 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase PLS229_11515 PF00091 Tubulin/FtsZ family, GTPase domain PLS229_11515 PF12327 FtsZ family, C-terminal domain PLS229_11520 PF02491 SHS2 domain inserted in FTSA PLS229_11525 PF08478 POTRA domain, FtsQ-type PLS229_11525 PF03799 Cell division protein FtsQ PLS229_11530 PF07478 D-ala D-ala ligase C-terminus PLS229_11535 PF02875 Mur ligase family, glutamate ligase domain PLS229_11535 PF01225 Mur ligase family, catalytic domain PLS229_11535 PF08245 Mur ligase middle domain PLS229_11540 PF04101 Glycosyltransferase family 28 C-terminal domain PLS229_11540 PF03033 Glycosyltransferase family 28 N-terminal domain PLS229_11545 PF01098 Cell cycle protein PLS229_11550 PF00953 Glycosyl transferase family 4 PLS229_11555 PF02875 Mur ligase family, glutamate ligase domain PLS229_11555 PF08245 Mur ligase middle domain PLS229_11555 PF01225 Mur ligase family, catalytic domain PLS229_11560 PF01225 Mur ligase family, catalytic domain PLS229_11560 PF02875 Mur ligase family, glutamate ligase domain PLS229_11560 PF08245 Mur ligase middle domain PLS229_11565 PF00905 Penicillin binding protein transpeptidase domain PLS229_11565 PF03717 Penicillin-binding Protein dimerisation domain PLS229_11570 PF04999 Cell division protein FtsL PLS229_11575 PF01795 MraW methylase family PLS229_11580 PF02381 MraZ protein, putative antitoxin-like PLS229_11585 PF02080 TrkA-C domain PLS229_11585 PF03600 Citrate transporter PLS229_11590 PF02390 Putative methyltransferase PLS229_11595 PF05690 Thiazole biosynthesis protein ThiG PLS229_11605 PF00657 GDSL-like Lipase/Acylhydrolase PLS229_11605 PF03797 Autotransporter beta-domain PLS229_11635 PF07977 FabA-like domain PLS229_11660 PF00692 dUTPase PLS229_11670 PF01119 DNA mismatch repair protein, C-terminal domain PLS229_11670 PF08676 MutL C terminal dimerisation domain PLS229_11675 PF11741 AMIN domain PLS229_11675 PF01520 N-acetylmuramoyl-L-alanine amidase PLS229_11680 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE PLS229_11685 PF03853 YjeF-related protein N-terminus PLS229_11685 PF01256 Carbohydrate kinase PLS229_11690 PF13742 OB-fold nucleic acid binding domain PLS229_11690 PF02601 Exonuclease VII, large subunit PLS229_11705 PF01612 3'-5' exonuclease PLS229_11705 PF00570 HRDC domain PLS229_11735 PF00216 Bacterial DNA-binding protein PLS229_11740 PF01588 Putative tRNA binding domain PLS229_11740 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain PLS229_11740 PF03147 Ferredoxin-fold anticodon binding domain PLS229_11740 PF03484 tRNA synthetase B5 domain PLS229_11740 PF03483 B3/4 domain PLS229_11745 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain PLS229_11745 PF01409 tRNA synthetases class II core domain (F) PLS229_11750 PF00453 Ribosomal protein L20 PLS229_11755 PF01632 Ribosomal protein L35 PLS229_11760 PF00707 Translation initiation factor IF-3, C-terminal domain PLS229_11760 PF05198 Translation initiation factor IF-3, N-terminal domain PLS229_11765 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain PLS229_11765 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PLS229_11765 PF02824 TGS domain PLS229_11765 PF03129 Anticodon binding domain PLS229_11775 PF18030 RimK PreATP-grasp domain PLS229_11775 PF08443 RimK-like ATP-grasp domain PLS229_11780 PF00072 Response regulator receiver domain PLS229_11780 PF00486 Transcriptional regulatory protein, C terminal PLS229_11785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PLS229_11785 PF11808 Phosphate regulon sensor protein PhoR PLS229_11785 PF00512 His Kinase A (phospho-acceptor) domain PLS229_11785 PF00989 PAS fold PLS229_11790 PF01121 Dephospho-CoA kinase PLS229_11795 PF01478 Type IV leader peptidase family PLS229_11795 PF06750 Bacterial Peptidase A24 N-terminal domain PLS229_11800 PF00482 Type II secretion system (T2SS), protein F PLS229_11805 PF07963 Prokaryotic N-terminal methylation motif PLS229_11805 PF00114 Pilin (bacterial filament) PLS229_11815 PF00114 Pilin (bacterial filament) PLS229_11815 PF07963 Prokaryotic N-terminal methylation motif PLS229_11830 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain PLS229_11830 PF00437 Type II/IV secretion system protein PLS229_11835 PF00158 Sigma-54 interaction domain PLS229_11835 PF00072 Response regulator receiver domain PLS229_11835 PF02954 Bacterial regulatory protein, Fis family PLS229_11840 PF00512 His Kinase A (phospho-acceptor) domain PLS229_11840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PLS229_11845 PF00549 CoA-ligase PLS229_11845 PF08442 ATP-grasp domain PLS229_11850 PF02629 CoA binding domain PLS229_11850 PF00549 CoA-ligase PLS229_11855 PF01926 50S ribosome-binding GTPase PLS229_11855 PF12631 MnmE helical domain PLS229_11855 PF10396 GTP-binding protein TrmE N-terminus PLS229_11865 PF02096 60Kd inner membrane protein PLS229_11865 PF14849 YidC periplasmic domain PLS229_11870 PF00825 Ribonuclease P PLS229_11875 PF00468 Ribosomal protein L34