locus-tag class description LPH43_00010 PF10459 Peptidase S46 LPH43_00015 PF13667 ThiC-associated domain LPH43_00015 PF01964 Radical SAM ThiC family LPH43_00020 PF00970 Oxidoreductase FAD-binding domain LPH43_00020 PF00175 Oxidoreductase NAD-binding domain LPH43_00025 PF00255 Glutathione peroxidase LPH43_00030 PF00854 POT family LPH43_00035 PF04493 Endonuclease V LPH43_00040 PF00300 Histidine phosphatase superfamily (branch 1) LPH43_00045 PF04055 Radical SAM superfamily LPH43_00055 PF00691 OmpA family LPH43_00060 PF04052 TolB amino-terminal domain LPH43_00060 PF07676 WD40-like Beta Propeller Repeat LPH43_00070 PF02472 Biopolymer transport protein ExbD/TolR LPH43_00075 PF01618 MotA/TolQ/ExbB proton channel family LPH43_00080 PF03061 Thioesterase superfamily LPH43_00085 PF17864 RuvB AAA lid domain LPH43_00085 PF05491 RuvB C-terminal winged helix domain LPH43_00085 PF05496 Holliday junction DNA helicase RuvB P-loop domain LPH43_00090 PF02705 K+ potassium transporter LPH43_00095 PF07499 RuvA, C-terminal domain LPH43_00095 PF01330 RuvA N terminal domain LPH43_00100 PF02075 Crossover junction endodeoxyribonuclease RuvC LPH43_00105 PF01709 Transcriptional regulator LPH43_00115 PF04362 Bacterial Fe(2+) trafficking LPH43_00120 PF14815 NUDIX domain LPH43_00120 PF00730 HhH-GPD superfamily base excision DNA repair protein LPH43_00120 PF00633 Helix-hairpin-helix motif LPH43_00125 PF00448 SRP54-type protein, GTPase domain LPH43_00125 PF02881 SRP54-type protein, helical bundle domain LPH43_00150 PF01850 PIN domain LPH43_00225 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ LPH43_00230 PF04221 RelB antitoxin LPH43_00305 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system LPH43_00360 PF06508 Queuosine biosynthesis protein QueC LPH43_00365 PF02938 GAD domain LPH43_00365 PF00152 tRNA synthetases class II (D, K and N) LPH43_00365 PF01336 OB-fold nucleic acid binding domain LPH43_00385 PF05683 Fumarase C-terminus LPH43_00385 PF05681 Fumarate hydratase (Fumerase) LPH43_00405 PF01648 4'-phosphopantetheinyl transferase superfamily LPH43_00410 PF02527 rRNA small subunit methyltransferase G LPH43_00415 PF02779 Transketolase, pyrimidine binding domain LPH43_00415 PF02780 Transketolase, C-terminal domain LPH43_00415 PF00456 Transketolase, thiamine diphosphate binding domain LPH43_00420 PF00375 Sodium:dicarboxylate symporter family LPH43_00430 PF01625 Peptide methionine sulfoxide reductase LPH43_00445 PF01432 Peptidase family M3 LPH43_00450 PF06903 VirK protein LPH43_00455 PF02875 Mur ligase family, glutamate ligase domain LPH43_00455 PF08245 Mur ligase middle domain LPH43_00470 PF00156 Phosphoribosyl transferase domain LPH43_00480 PF00072 Response regulator receiver domain LPH43_00480 PF01339 CheB methylesterase LPH43_00485 PF01584 CheW-like domain LPH43_00485 PF02895 Signal transducing histidine kinase, homodimeric domain LPH43_00485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH43_00485 PF01627 Hpt domain LPH43_00485 PF00072 Response regulator receiver domain LPH43_00490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LPH43_00490 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LPH43_00495 PF01584 CheW-like domain LPH43_00500 PF00072 Response regulator receiver domain LPH43_00505 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain LPH43_00505 PF02951 Prokaryotic glutathione synthetase, N-terminal domain LPH43_00520 PF02092 Glycyl-tRNA synthetase beta subunit LPH43_00520 PF05746 DALR anticodon binding domain LPH43_00525 PF02091 Glycyl-tRNA synthetase alpha subunit LPH43_00530 PF00795 Carbon-nitrogen hydrolase LPH43_00530 PF02540 NAD synthase LPH43_00555 PF03692 Putative zinc- or iron-chelating domain LPH43_00570 PF00561 alpha/beta hydrolase fold LPH43_00580 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LPH43_00580 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LPH43_00590 PF00588 SpoU rRNA Methylase family LPH43_00600 PF01808 AICARFT/IMPCHase bienzyme LPH43_00600 PF02142 MGS-like domain LPH43_00605 PF02843 Phosphoribosylglycinamide synthetase, C domain LPH43_00605 PF02844 Phosphoribosylglycinamide synthetase, N domain LPH43_00605 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LPH43_00625 PF12805 FUSC-like inner membrane protein yccS LPH43_00635 PF03186 CobD/Cbib protein LPH43_00640 PF03895 YadA-like membrane anchor domain LPH43_00640 PF05658 Head domain of trimeric autotransporter adhesin LPH43_00640 PF05662 Coiled stalk of trimeric autotransporter adhesin LPH43_00645 PF01227 GTP cyclohydrolase I LPH43_00655 PF00132 Bacterial transferase hexapeptide (six repeats) LPH43_00660 PF00588 SpoU rRNA Methylase family LPH43_00660 PF08032 RNA 2'-O ribose methyltransferase substrate binding LPH43_00665 PF00773 RNB domain LPH43_00665 PF00575 S1 RNA binding domain LPH43_00665 PF17876 Cold shock domain LPH43_00665 PF08461 Ribonuclease R winged-helix domain LPH43_00665 PF08206 Ribonuclease B OB domain LPH43_00675 PF00959 Phage lysozyme LPH43_00745 PF02129 X-Pro dipeptidyl-peptidase (S15 family) LPH43_00750 PF07690 Major Facilitator Superfamily LPH43_00755 PF03466 LysR substrate binding domain LPH43_00755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH43_00770 PF01161 Phosphatidylethanolamine-binding protein LPH43_00775 PF00719 Inorganic pyrophosphatase LPH43_00780 PF00085 Thioredoxin LPH43_00790 PF13603 Leucyl-tRNA synthetase, Domain 2 LPH43_00790 PF00133 tRNA synthetases class I (I, L, M and V) LPH43_00790 PF08264 Anticodon-binding domain of tRNA LPH43_00805 PF01467 Cytidylyltransferase-like LPH43_00820 PF13406 Transglycosylase SLT domain LPH43_00825 PF03330 Lytic transglycolase LPH43_00825 PF05036 Sporulation related domain LPH43_00930 PF13332 Hemagglutinin repeat LPH43_00930 PF05860 haemagglutination activity domain LPH43_00930 PF15605 Bacterial toxin 28 LPH43_00930 PF04829 Pre-toxin domain with VENN motif LPH43_00960 PF04829 Pre-toxin domain with VENN motif LPH43_00960 PF05860 haemagglutination activity domain LPH43_00960 PF13332 Hemagglutinin repeat LPH43_00965 PF05860 haemagglutination activity domain LPH43_00965 PF04829 Pre-toxin domain with VENN motif LPH43_00965 PF13018 Extended Signal Peptide of Type V secretion system LPH43_00965 PF13332 Hemagglutinin repeat LPH43_01060 PF13332 Hemagglutinin repeat LPH43_01060 PF05860 haemagglutination activity domain LPH43_01060 PF15605 Bacterial toxin 28 LPH43_01060 PF04829 Pre-toxin domain with VENN motif LPH43_01060 PF05860 haemagglutination activity domain LPH43_01060 PF13332 Hemagglutinin repeat LPH43_01060 PF15605 Bacterial toxin 28 LPH43_01060 PF04829 Pre-toxin domain with VENN motif LPH43_01065 PF13332 Hemagglutinin repeat LPH43_01065 PF13018 Extended Signal Peptide of Type V secretion system LPH43_01065 PF05860 haemagglutination activity domain LPH43_01065 PF04829 Pre-toxin domain with VENN motif LPH43_01080 PF01810 LysE type translocator LPH43_01100 PF01132 Elongation factor P (EF-P) OB domain LPH43_01100 PF09285 Elongation factor P, C-terminal LPH43_01100 PF08207 Elongation factor P (EF-P) KOW-like domain LPH43_01105 PF01565 FAD binding domain LPH43_01105 PF02913 FAD linked oxidases, C-terminal domain LPH43_01110 PF01842 ACT domain LPH43_01110 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LPH43_01110 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LPH43_01115 PF13520 Amino acid permease LPH43_01120 PF13520 Amino acid permease LPH43_01125 PF00596 Class II Aldolase and Adducin N-terminal domain LPH43_01130 PF03079 ARD/ARD' family LPH43_01160 PF01502 Phosphoribosyl-AMP cyclohydrolase LPH43_01160 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LPH43_01165 PF00977 Histidine biosynthesis protein LPH43_01170 PF00977 Histidine biosynthesis protein LPH43_01175 PF00117 Glutamine amidotransferase class-I LPH43_01180 PF00475 Imidazoleglycerol-phosphate dehydratase LPH43_01185 PF00155 Aminotransferase class I and II LPH43_01190 PF00815 Histidinol dehydrogenase LPH43_01195 PF08029 HisG, C-terminal domain LPH43_01195 PF01634 ATP phosphoribosyltransferase LPH43_01210 PF13393 Histidyl-tRNA synthetase LPH43_01210 PF03129 Anticodon binding domain LPH43_01215 PF14821 Threonine synthase N terminus LPH43_01215 PF00291 Pyridoxal-phosphate dependent enzyme LPH43_01220 PF00288 GHMP kinases N terminal domain LPH43_01220 PF08544 GHMP kinases C terminal LPH43_01225 PF03447 Homoserine dehydrogenase, NAD binding domain LPH43_01225 PF13840 ACT domain LPH43_01225 PF00742 Homoserine dehydrogenase LPH43_01225 PF01842 ACT domain LPH43_01225 PF00696 Amino acid kinase family LPH43_01235 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LPH43_01235 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LPH43_01240 PF03652 Holliday junction resolvase LPH43_01245 PF02622 Uncharacterized ACR, COG1678 LPH43_01250 PF00768 D-alanyl-D-alanine carboxypeptidase LPH43_01250 PF07943 Penicillin-binding protein 5, C-terminal domain LPH43_01255 PF00141 Peroxidase LPH43_01260 PF01556 DnaJ C terminal domain LPH43_01260 PF00226 DnaJ domain LPH43_01270 PF00905 Penicillin binding protein transpeptidase domain LPH43_01270 PF00912 Transglycosylase LPH43_01270 PF06832 Penicillin-Binding Protein C-terminus Family LPH43_01275 PF00593 TonB dependent receptor LPH43_01275 PF07715 TonB-dependent Receptor Plug Domain LPH43_01295 PF04542 Sigma-70 region 2 LPH43_01295 PF08281 Sigma-70, region 4 LPH43_01305 PF13180 PDZ domain LPH43_01310 PF00009 Elongation factor Tu GTP binding domain LPH43_01310 PF03144 Elongation factor Tu domain 2 LPH43_01310 PF06421 GTP-binding protein LepA C-terminus LPH43_01310 PF00679 Elongation factor G C-terminus LPH43_01315 PF10502 Signal peptidase, peptidase S26 LPH43_01325 PF00035 Double-stranded RNA binding motif LPH43_01325 PF14622 Ribonuclease-III-like LPH43_01330 PF01926 50S ribosome-binding GTPase LPH43_01330 PF07650 KH domain LPH43_01335 PF11967 Recombination protein O N terminal LPH43_01335 PF02565 Recombination protein O C terminal LPH43_01340 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LPH43_01340 PF02780 Transketolase, C-terminal domain LPH43_01340 PF02779 Transketolase, pyrimidine binding domain LPH43_01345 PF00474 Sodium:solute symporter family LPH43_01355 PF16177 Acetyl-coenzyme A synthetase N-terminus LPH43_01355 PF00501 AMP-binding enzyme LPH43_01355 PF13193 AMP-binding enzyme C-terminal domain LPH43_01360 PF02659 Putative manganese efflux pump LPH43_01365 PF00106 short chain dehydrogenase LPH43_01380 PF13360 PQQ-like domain LPH43_01385 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region LPH43_01385 PF07676 WD40-like Beta Propeller Repeat LPH43_01385 PF00326 Prolyl oligopeptidase family LPH43_01390 PF03169 OPT oligopeptide transporter protein LPH43_01395 PF01266 FAD dependent oxidoreductase LPH43_01395 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LPH43_01400 PF00230 Major intrinsic protein LPH43_01405 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LPH43_01405 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LPH43_01420 PF08267 Cobalamin-independent synthase, N-terminal domain LPH43_01420 PF01717 Cobalamin-independent synthase, Catalytic domain LPH43_01425 PF02677 Epoxyqueuosine reductase QueH LPH43_01435 PF00501 AMP-binding enzyme LPH43_01445 PF00535 Glycosyl transferase family 2 LPH43_01450 PF01370 NAD dependent epimerase/dehydratase family LPH43_01455 PF02195 ParB-like nuclease domain LPH43_01455 PF17762 HTH domain found in ParB protein LPH43_01460 PF13614 AAA domain LPH43_01475 PF02403 Seryl-tRNA synthetase N-terminal domain LPH43_01475 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LPH43_01480 PF03544 Gram-negative bacterial TonB protein C-terminal LPH43_01485 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LPH43_01490 PF01817 Chorismate mutase type II LPH43_01490 PF00800 Prephenate dehydratase LPH43_01490 PF01842 ACT domain LPH43_01495 PF00266 Aminotransferase class-V LPH43_01505 PF12679 ABC-2 family transporter protein LPH43_01510 PF00005 ABC transporter LPH43_01540 PF00440 Bacterial regulatory proteins, tetR family LPH43_01545 PF01209 ubiE/COQ5 methyltransferase family LPH43_01555 PF00294 pfkB family carbohydrate kinase LPH43_01560 PF07690 Major Facilitator Superfamily LPH43_01570 PF04102 SlyX LPH43_01575 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LPH43_01575 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LPH43_01575 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LPH43_01580 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LPH43_01580 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LPH43_01585 PF00255 Glutathione peroxidase LPH43_01595 PF00005 ABC transporter LPH43_01610 PF00206 Lyase LPH43_01610 PF10415 Fumarase C C-terminus LPH43_01615 PF08328 Adenylosuccinate lyase C-terminal LPH43_01615 PF00206 Lyase LPH43_01620 PF08007 Cupin superfamily protein LPH43_01625 PF16078 2-oxoglutarate dehydrogenase N-terminus LPH43_01625 PF00676 Dehydrogenase E1 component LPH43_01625 PF16870 2-oxoglutarate dehydrogenase C-terminal LPH43_01625 PF02779 Transketolase, pyrimidine binding domain LPH43_01630 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LPH43_01630 PF00364 Biotin-requiring enzyme LPH43_01630 PF02817 e3 binding domain LPH43_01640 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LPH43_01640 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPH43_01650 PF00899 ThiF family LPH43_01665 PF00325 Bacterial regulatory proteins, crp family LPH43_01665 PF00027 Cyclic nucleotide-binding domain LPH43_01670 PF02675 S-adenosylmethionine decarboxylase LPH43_01675 PF03232 Ubiquinone biosynthesis protein COQ7 LPH43_01680 PF00572 Ribosomal protein L13 LPH43_01685 PF00380 Ribosomal protein S9/S16 LPH43_01690 PF00285 Citrate synthase, C-terminal domain LPH43_01695 PF01197 Ribosomal protein L31 LPH43_01700 PF00814 Glycoprotease family LPH43_01705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH43_01705 PF03466 LysR substrate binding domain LPH43_01710 PF13192 Thioredoxin domain LPH43_01710 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPH43_01715 PF10417 C-terminal domain of 1-Cys peroxiredoxin LPH43_01715 PF00578 AhpC/TSA family LPH43_01720 PF05658 Head domain of trimeric autotransporter adhesin LPH43_01720 PF03895 YadA-like membrane anchor domain LPH43_01720 PF05662 Coiled stalk of trimeric autotransporter adhesin LPH43_01720 PF13018 Extended Signal Peptide of Type V secretion system LPH43_01725 PF03958 Bacterial type II/III secretion system short domain LPH43_01725 PF00263 Bacterial type II and III secretion system protein LPH43_01735 PF10741 Type II secretion system (T2SS), protein M subtype b LPH43_01740 PF05137 Fimbrial assembly protein (PilN) LPH43_01745 PF03934 Type II secretion system (T2SS), protein K LPH43_01755 PF03934 Type II secretion system (T2SS), protein K LPH43_01765 PF07963 Prokaryotic N-terminal methylation motif LPH43_01770 PF12019 Type II transport protein GspH LPH43_01775 PF08334 Type II secretion system (T2SS), protein G LPH43_01780 PF00482 Type II secretion system (T2SS), protein F LPH43_01785 PF00437 Type II/IV secretion system protein LPH43_01785 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LPH43_01805 PF17827 PrmC N-terminal domain LPH43_01805 PF05175 Methyltransferase small domain LPH43_01815 PF00561 alpha/beta hydrolase fold LPH43_01830 PF04055 Radical SAM superfamily LPH43_01830 PF06969 HemN C-terminal domain LPH43_01835 PF01725 Ham1 family LPH43_01840 PF03725 3' exoribonuclease family, domain 2 LPH43_01840 PF01138 3' exoribonuclease family, domain 1 LPH43_01845 PF03755 YicC-like family, N-terminal region LPH43_01845 PF08340 Domain of unknown function (DUF1732) LPH43_01850 PF00625 Guanylate kinase LPH43_01855 PF01192 RNA polymerase Rpb6 LPH43_01860 PF00009 Elongation factor Tu GTP binding domain LPH43_01865 PF01507 Phosphoadenosine phosphosulfate reductase family LPH43_01870 PF00258 Flavodoxin LPH43_01870 PF00175 Oxidoreductase NAD-binding domain LPH43_01870 PF00667 FAD binding domain LPH43_01875 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LPH43_01875 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LPH43_01880 PF01507 Phosphoadenosine phosphosulfate reductase family LPH43_01905 PF13369 Transglutaminase-like superfamily LPH43_01940 PF11838 ERAP1-like C-terminal domain LPH43_01940 PF01433 Peptidase family M1 domain LPH43_01945 PF01209 ubiE/COQ5 methyltransferase family LPH43_01955 PF00004 ATPase family associated with various cellular activities (AAA) LPH43_01955 PF07724 AAA domain (Cdc48 subfamily) LPH43_01955 PF10431 C-terminal, D2-small domain, of ClpB protein LPH43_01960 PF00227 Proteasome subunit LPH43_01970 PF02899 Phage integrase, N-terminal SAM-like domain LPH43_01970 PF00589 Phage integrase family LPH43_01980 PF01678 Diaminopimelate epimerase LPH43_01990 PF00326 Prolyl oligopeptidase family LPH43_01990 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LPH43_02000 PF02082 Transcriptional regulator LPH43_02005 PF01458 Uncharacterized protein family (UPF0051) LPH43_02010 PF00005 ABC transporter LPH43_02015 PF01458 Uncharacterized protein family (UPF0051) LPH43_02020 PF00266 Aminotransferase class-V LPH43_02025 PF00355 Rieske [2Fe-2S] domain LPH43_02030 PF00534 Glycosyl transferases group 1 LPH43_02030 PF13439 Glycosyltransferase Family 4 LPH43_02035 PF01522 Polysaccharide deacetylase LPH43_02040 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LPH43_02040 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LPH43_02040 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LPH43_02040 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LPH43_02045 PF01039 Carboxyl transferase domain LPH43_02045 PF17848 Acetyl-coA carboxylase zinc finger domain LPH43_02065 PF01979 Amidohydrolase family LPH43_02070 PF01380 SIS domain LPH43_02080 PF07690 Major Facilitator Superfamily LPH43_02090 PF02685 Glucokinase LPH43_02115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH43_02115 PF00512 His Kinase A (phospho-acceptor) domain LPH43_02125 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LPH43_02130 PF00004 ATPase family associated with various cellular activities (AAA) LPH43_02130 PF16193 AAA C-terminal domain LPH43_02130 PF12002 MgsA AAA+ ATPase C terminal LPH43_02135 PF03548 Outer membrane lipoprotein carrier protein LolA LPH43_02150 PF17854 FtsK alpha domain LPH43_02150 PF09397 Ftsk gamma domain LPH43_02150 PF01580 FtsK/SpoIIIE family LPH43_02150 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LPH43_02155 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPH43_02165 PF03588 Leucyl/phenylalanyl-tRNA protein transferase LPH43_02170 PF01176 Translation initiation factor 1A / IF-1 LPH43_02175 PF00004 ATPase family associated with various cellular activities (AAA) LPH43_02175 PF07724 AAA domain (Cdc48 subfamily) LPH43_02175 PF17871 AAA lid domain LPH43_02175 PF02861 Clp amino terminal domain, pathogenicity island component LPH43_02175 PF10431 C-terminal, D2-small domain, of ClpB protein LPH43_02180 PF02617 ATP-dependent Clp protease adaptor protein ClpS LPH43_02185 PF00293 NUDIX domain LPH43_02195 PF04356 Protein of unknown function (DUF489) LPH43_02210 PF01323 DSBA-like thioredoxin domain LPH43_02220 PF01926 50S ribosome-binding GTPase LPH43_02225 PF04107 Glutamate-cysteine ligase family 2(GCS2) LPH43_02235 PF00202 Aminotransferase class-III LPH43_02240 PF00027 Cyclic nucleotide-binding domain LPH43_02240 PF00520 Ion transport protein LPH43_02245 PF02899 Phage integrase, N-terminal SAM-like domain LPH43_02245 PF00589 Phage integrase family LPH43_02250 PF13098 Thioredoxin-like domain LPH43_02250 PF10411 Disulfide bond isomerase protein N-terminus LPH43_02255 PF02769 AIR synthase related protein, C-terminal domain LPH43_02255 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal LPH43_02255 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LPH43_02265 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LPH43_02275 PF01380 SIS domain LPH43_02275 PF00571 CBS domain LPH43_02295 PF12399 Branched-chain amino acid ATP-binding cassette transporter LPH43_02295 PF00005 ABC transporter LPH43_02300 PF04963 Sigma-54 factor, core binding domain LPH43_02300 PF00309 Sigma-54 factor, Activator interacting domain (AID) LPH43_02300 PF04552 Sigma-54, DNA binding domain LPH43_02305 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LPH43_02310 PF02603 HPr Serine kinase N terminus LPH43_02310 PF07475 HPr Serine kinase C-terminal domain LPH43_02315 PF03668 P-loop ATPase protein family LPH43_02325 PF00381 PTS HPr component phosphorylation site LPH43_02330 PF02896 PEP-utilising enzyme, TIM barrel domain LPH43_02330 PF00391 PEP-utilising enzyme, mobile domain LPH43_02330 PF05524 PEP-utilising enzyme, N-terminal LPH43_02335 PF03448 MgtE intracellular N domain LPH43_02335 PF01769 Divalent cation transporter LPH43_02335 PF00571 CBS domain LPH43_02340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LPH43_02375 PF08281 Sigma-70, region 4 LPH43_02375 PF04542 Sigma-70 region 2 LPH43_02385 PF00082 Subtilase family LPH43_02390 PF00436 Single-strand binding protein family LPH43_02395 PF00348 Polyprenyl synthetase LPH43_02400 PF06481 COX Aromatic Rich Motif LPH43_02400 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LPH43_02405 PF00115 Cytochrome C and Quinol oxidase polypeptide I LPH43_02410 PF00510 Cytochrome c oxidase subunit III LPH43_02415 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LPH43_02420 PF02347 Glycine cleavage system P-protein LPH43_02430 PF04408 Helicase associated domain (HA2) LPH43_02430 PF00270 DEAD/DEAH box helicase LPH43_02430 PF11898 Domain of unknown function (DUF3418) LPH43_02430 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LPH43_02430 PF00271 Helicase conserved C-terminal domain LPH43_02435 PF00210 Ferritin-like domain LPH43_02440 PF00270 DEAD/DEAH box helicase LPH43_02440 PF00271 Helicase conserved C-terminal domain LPH43_02440 PF00570 HRDC domain LPH43_02440 PF16124 RecQ zinc-binding LPH43_02440 PF09382 RQC domain LPH43_02460 PF00296 Luciferase-like monooxygenase LPH43_02465 PF18073 Rubredoxin metal binding domain LPH43_02475 PF00290 Tryptophan synthase alpha chain LPH43_02480 PF00291 Pyridoxal-phosphate dependent enzyme LPH43_02485 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LPH43_02490 PF01416 tRNA pseudouridine synthase LPH43_02500 PF01118 Semialdehyde dehydrogenase, NAD binding domain LPH43_02500 PF02774 Semialdehyde dehydrogenase, dimerisation domain LPH43_02505 PF01264 Chorismate synthase LPH43_02510 PF05175 Methyltransferase small domain LPH43_02520 PF06594 Haemolysin-type calcium binding protein related domain LPH43_02520 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) LPH43_02575 PF00348 Polyprenyl synthetase LPH43_02580 PF02609 Exonuclease VII small subunit LPH43_02585 PF11734 TilS substrate C-terminal domain LPH43_02585 PF01171 PP-loop family LPH43_02585 PF09179 TilS substrate binding domain LPH43_02595 PF00375 Sodium:dicarboxylate symporter family LPH43_02600 PF00877 NlpC/P60 family LPH43_02605 PF00877 NlpC/P60 family LPH43_02610 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LPH43_02615 PF04235 Protein of unknown function (DUF418) LPH43_02640 PF10576 Iron-sulfur binding domain of endonuclease III LPH43_02640 PF00633 Helix-hairpin-helix motif LPH43_02640 PF00730 HhH-GPD superfamily base excision DNA repair protein LPH43_02655 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LPH43_02655 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LPH43_02660 PF00293 NUDIX domain LPH43_02690 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LPH43_02690 PF01488 Shikimate / quinate 5-dehydrogenase LPH43_02690 PF08501 Shikimate dehydrogenase substrate binding domain LPH43_02695 PF08543 Phosphomethylpyrimidine kinase LPH43_02695 PF02581 Thiamine monophosphate synthase LPH43_02715 PF02683 Cytochrome C biogenesis protein transmembrane region LPH43_02715 PF11412 Disulphide bond corrector protein DsbC LPH43_02720 PF03091 CutA1 divalent ion tolerance protein LPH43_02725 PF00166 Chaperonin 10 Kd subunit LPH43_02730 PF00118 TCP-1/cpn60 chaperonin family LPH43_02755 PF01370 NAD dependent epimerase/dehydratase family LPH43_02760 PF01370 NAD dependent epimerase/dehydratase family LPH43_02765 PF16363 GDP-mannose 4,6 dehydratase LPH43_02780 PF00291 Pyridoxal-phosphate dependent enzyme LPH43_02800 PF00593 TonB dependent receptor LPH43_02800 PF07715 TonB-dependent Receptor Plug Domain LPH43_02805 PF18331 PKHD-type hydroxylase C-terminal domain LPH43_02805 PF13640 2OG-Fe(II) oxygenase superfamily LPH43_02825 PF02424 ApbE family LPH43_02830 PF00175 Oxidoreductase NAD-binding domain LPH43_02830 PF00667 FAD binding domain LPH43_02830 PF00258 Flavodoxin LPH43_02840 PF01636 Phosphotransferase enzyme family LPH43_02845 PF00483 Nucleotidyl transferase LPH43_02850 PF00308 Bacterial dnaA protein LPH43_02855 PF01594 AI-2E family transporter LPH43_02865 PF02769 AIR synthase related protein, C-terminal domain LPH43_02865 PF00586 AIR synthase related protein, N-terminal domain LPH43_02870 PF00551 Formyl transferase LPH43_02885 PF02223 Thymidylate kinase LPH43_02890 PF05649 Peptidase family M13 LPH43_02890 PF01431 Peptidase family M13 LPH43_02895 PF07977 FabA-like domain LPH43_02900 PF01171 PP-loop family LPH43_02905 PF04381 Putative exonuclease, RdgC LPH43_02915 PF00762 Ferrochelatase LPH43_02925 PF02416 mttA/Hcf106 family LPH43_02930 PF02416 mttA/Hcf106 family LPH43_02935 PF00902 Sec-independent protein translocase protein (TatC) LPH43_02945 PF00117 Glutamine amidotransferase class-I LPH43_02945 PF00958 GMP synthase C terminal domain LPH43_02945 PF02540 NAD synthase LPH43_02950 PF00127 Copper binding proteins, plastocyanin/azurin family LPH43_02955 PF03193 RsgA GTPase LPH43_02960 PF02021 Uncharacterised protein family UPF0102 LPH43_02965 PF04348 LppC putative lipoprotein LPH43_02970 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LPH43_02975 PF07715 TonB-dependent Receptor Plug Domain LPH43_02975 PF00593 TonB dependent receptor LPH43_02980 PF09334 tRNA synthetases class I (M) LPH43_02980 PF01588 Putative tRNA binding domain LPH43_02990 PF04060 Putative Fe-S cluster LPH43_03035 PF07687 Peptidase dimerisation domain LPH43_03035 PF01546 Peptidase family M20/M25/M40 LPH43_03060 PF05567 Neisseria PilC beta-propeller domain LPH43_03085 PF11892 Domain of unknown function (DUF3412) LPH43_03085 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases LPH43_03085 PF03641 Possible lysine decarboxylase LPH43_03090 PF00563 EAL domain LPH43_03090 PF12792 CSS motif domain associated with EAL LPH43_03100 PF00899 ThiF family LPH43_03105 PF01926 50S ribosome-binding GTPase LPH43_03105 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LPH43_03110 PF13360 PQQ-like domain LPH43_03110 PF01011 PQQ enzyme repeat LPH43_03130 PF04055 Radical SAM superfamily LPH43_03135 PF00334 Nucleoside diphosphate kinase LPH43_03140 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LPH43_03140 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LPH43_03145 PF00709 Adenylosuccinate synthetase LPH43_03155 PF01145 SPFH domain / Band 7 family LPH43_03160 PF01145 SPFH domain / Band 7 family LPH43_03160 PF12221 Bacterial membrane protein N terminal LPH43_03165 PF08240 Alcohol dehydrogenase GroES-like domain LPH43_03165 PF00107 Zinc-binding dehydrogenase LPH43_03170 PF00072 Response regulator receiver domain LPH43_03185 PF03129 Anticodon binding domain LPH43_03185 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LPH43_03185 PF04073 Aminoacyl-tRNA editing domain LPH43_03195 PF01066 CDP-alcohol phosphatidyltransferase LPH43_03205 PF00583 Acetyltransferase (GNAT) family LPH43_03220 PF00933 Glycosyl hydrolase family 3 N terminal domain LPH43_03220 PF01915 Glycosyl hydrolase family 3 C-terminal domain LPH43_03220 PF14310 Fibronectin type III-like domain LPH43_03225 PF00924 Mechanosensitive ion channel LPH43_03230 PF02152 Dihydroneopterin aldolase LPH43_03235 PF00814 Glycoprotease family LPH43_03240 PF01165 Ribosomal protein S21 LPH43_03245 PF09424 Yqey-like protein LPH43_03250 PF03631 Virulence factor BrkB LPH43_03255 PF08278 DNA primase DnaG DnaB-binding LPH43_03255 PF08275 DNA primase catalytic core, N-terminal domain LPH43_03255 PF01807 CHC2 zinc finger LPH43_03255 PF10410 DnaB-helicase binding domain of primase LPH43_03265 PF00579 tRNA synthetases class I (W and Y) LPH43_03270 PF13538 UvrD-like helicase C-terminal domain LPH43_03275 PF12705 PD-(D/E)XK nuclease superfamily LPH43_03275 PF00580 UvrD/REP helicase N-terminal domain LPH43_03275 PF13361 UvrD-like helicase C-terminal domain LPH43_03280 PF17946 RecC C-terminal domain LPH43_03285 PF00005 ABC transporter LPH43_03290 PF02405 Permease MlaE LPH43_03295 PF02470 MlaD protein LPH43_03300 PF05494 MlaC protein LPH43_03310 PF04333 MlaA lipoprotein LPH43_03315 PF02646 RmuC family LPH43_03320 PF00005 ABC transporter LPH43_03335 PF13520 Amino acid permease LPH43_03345 PF17785 PUA-like domain LPH43_03345 PF10672 S-adenosylmethionine-dependent methyltransferase LPH43_03350 PF03741 Integral membrane protein TerC family LPH43_03365 PF01521 Iron-sulphur cluster biosynthesis LPH43_03380 PF00072 Response regulator receiver domain LPH43_03380 PF00486 Transcriptional regulatory protein, C terminal LPH43_03385 PF00672 HAMP domain LPH43_03385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH43_03385 PF00512 His Kinase A (phospho-acceptor) domain LPH43_03385 PF01627 Hpt domain LPH43_03385 PF00072 Response regulator receiver domain LPH43_03385 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LPH43_03390 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LPH43_03390 PF01627 Hpt domain LPH43_03390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH43_03390 PF00672 HAMP domain LPH43_03390 PF00512 His Kinase A (phospho-acceptor) domain LPH43_03390 PF00072 Response regulator receiver domain LPH43_03395 PF00210 Ferritin-like domain LPH43_03420 PF02773 S-adenosylmethionine synthetase, C-terminal domain LPH43_03420 PF02772 S-adenosylmethionine synthetase, central domain LPH43_03420 PF00438 S-adenosylmethionine synthetase, N-terminal domain LPH43_03430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH43_03435 PF00486 Transcriptional regulatory protein, C terminal LPH43_03435 PF00072 Response regulator receiver domain LPH43_03445 PF01207 Dihydrouridine synthase (Dus) LPH43_03450 PF00593 TonB dependent receptor LPH43_03450 PF07715 TonB-dependent Receptor Plug Domain LPH43_03465 PF07724 AAA domain (Cdc48 subfamily) LPH43_03465 PF17871 AAA lid domain LPH43_03465 PF00004 ATPase family associated with various cellular activities (AAA) LPH43_03465 PF02861 Clp amino terminal domain, pathogenicity island component LPH43_03465 PF10431 C-terminal, D2-small domain, of ClpB protein LPH43_03475 PF00301 Rubredoxin LPH43_03480 PF02581 Thiamine monophosphate synthase LPH43_03500 PF00067 Cytochrome P450 LPH43_03530 PF03796 DnaB-like helicase C terminal domain LPH43_03530 PF00772 DnaB-like helicase N terminal domain LPH43_03535 PF00691 OmpA family LPH43_03535 PF05736 OprF membrane domain LPH43_03545 PF00248 Aldo/keto reductase family LPH43_03550 PF00905 Penicillin binding protein transpeptidase domain LPH43_03550 PF00912 Transglycosylase LPH43_03550 PF17092 Penicillin-binding protein OB-like domain LPH43_03555 PF11104 Type IV pilus assembly protein PilM; LPH43_03560 PF05137 Fimbrial assembly protein (PilN) LPH43_03565 PF04350 Pilus assembly protein, PilO LPH43_03570 PF04351 Pilus assembly protein, PilP LPH43_03575 PF11741 AMIN domain LPH43_03575 PF00263 Bacterial type II and III secretion system protein LPH43_03575 PF03958 Bacterial type II/III secretion system short domain LPH43_03575 PF07660 Secretin and TonB N terminus short domain LPH43_03585 PF00884 Sulfatase LPH43_03585 PF08019 Phosphoethanolamine transferase EptA/EptB LPH43_03590 PF00067 Cytochrome P450 LPH43_03595 PF00270 DEAD/DEAH box helicase LPH43_03595 PF00271 Helicase conserved C-terminal domain LPH43_03595 PF17191 RecG wedge domain LPH43_03600 PF01042 Endoribonuclease L-PSP LPH43_03605 PF13291 ACT domain LPH43_03605 PF04607 Region found in RelA / SpoT proteins LPH43_03605 PF02824 TGS domain LPH43_03615 PF01565 FAD binding domain LPH43_03615 PF02913 FAD linked oxidases, C-terminal domain LPH43_03620 PF05736 OprF membrane domain LPH43_03620 PF00691 OmpA family LPH43_03625 PF02600 Disulfide bond formation protein DsbB LPH43_03630 PF07715 TonB-dependent Receptor Plug Domain LPH43_03630 PF00593 TonB dependent receptor LPH43_03635 PF02590 Predicted SPOUT methyltransferase LPH43_03650 PF04851 Type III restriction enzyme, res subunit LPH43_03650 PF02151 UvrB/uvrC motif LPH43_03650 PF12344 Ultra-violet resistance protein B LPH43_03650 PF17757 UvrB interaction domain LPH43_03650 PF00271 Helicase conserved C-terminal domain LPH43_03665 PF00701 Dihydrodipicolinate synthetase family LPH43_03675 PF00578 AhpC/TSA family LPH43_03680 PF13638 PIN domain LPH43_03680 PF02562 PhoH-like protein LPH43_03700 PF02769 AIR synthase related protein, C-terminal domain LPH43_03700 PF00586 AIR synthase related protein, N-terminal domain LPH43_03705 PF01029 NusB family LPH43_03710 PF00885 6,7-dimethyl-8-ribityllumazine synthase LPH43_03715 PF00925 GTP cyclohydrolase II LPH43_03715 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LPH43_03720 PF00677 Lumazine binding domain LPH43_03725 PF01872 RibD C-terminal domain LPH43_03725 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LPH43_03735 PF03477 ATP cone domain LPH43_03745 PF00464 Serine hydroxymethyltransferase LPH43_03750 PF12848 ABC transporter LPH43_03750 PF00005 ABC transporter LPH43_03755 PF06039 Malate:quinone oxidoreductase (Mqo) LPH43_03760 PF04134 Protein of unknown function, DUF393 LPH43_03765 PF02578 Multi-copper polyphenol oxidoreductase laccase LPH43_03770 PF01479 S4 domain LPH43_03770 PF00849 RNA pseudouridylate synthase LPH43_03775 PF13525 Outer membrane lipoprotein LPH43_03785 PF07670 Nucleoside recognition LPH43_03785 PF02421 Ferrous iron transport protein B LPH43_03785 PF07664 Ferrous iron transport protein B C terminus LPH43_03800 PF04386 Stringent starvation protein B LPH43_03805 PF02798 Glutathione S-transferase, N-terminal domain LPH43_03805 PF00043 Glutathione S-transferase, C-terminal domain LPH43_03825 PF01464 Transglycosylase SLT domain LPH43_03830 PF00919 Uncharacterized protein family UPF0004 LPH43_03830 PF01938 TRAM domain LPH43_03830 PF04055 Radical SAM superfamily LPH43_03835 PF02562 PhoH-like protein LPH43_03840 PF02130 Uncharacterized protein family UPF0054 LPH43_03850 PF03471 Transporter associated domain LPH43_03850 PF00571 CBS domain LPH43_03880 PF13332 Hemagglutinin repeat LPH43_03880 PF05860 haemagglutination activity domain LPH43_03880 PF04829 Pre-toxin domain with VENN motif LPH43_03885 PF04829 Pre-toxin domain with VENN motif LPH43_03885 PF13018 Extended Signal Peptide of Type V secretion system LPH43_03885 PF13332 Hemagglutinin repeat LPH43_03885 PF05860 haemagglutination activity domain LPH43_03890 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB LPH43_03890 PF08479 POTRA domain, ShlB-type LPH43_03890 PF17287 POTRA domain LPH43_03900 PF00521 DNA gyrase/topoisomerase IV, subunit A LPH43_03900 PF03989 DNA gyrase C-terminal domain, beta-propeller LPH43_03905 PF01008 Initiation factor 2 subunit family LPH43_03915 PF00152 tRNA synthetases class II (D, K and N) LPH43_03920 PF00583 Acetyltransferase (GNAT) family LPH43_03925 PF00533 BRCA1 C Terminus (BRCT) domain LPH43_03925 PF01653 NAD-dependent DNA ligase adenylation domain LPH43_03925 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LPH43_03925 PF12826 Helix-hairpin-helix motif LPH43_03925 PF03120 NAD-dependent DNA ligase OB-fold domain LPH43_03935 PF04354 ZipA, C-terminal FtsZ-binding domain LPH43_03940 PF02463 RecF/RecN/SMC N terminal domain LPH43_03945 PF01281 Ribosomal protein L9, N-terminal domain LPH43_03945 PF03948 Ribosomal protein L9, C-terminal domain LPH43_03950 PF01084 Ribosomal protein S18 LPH43_03955 PF01250 Ribosomal protein S6 LPH43_03960 PF01521 Iron-sulphur cluster biosynthesis LPH43_03965 PF00152 tRNA synthetases class II (D, K and N) LPH43_03965 PF01336 OB-fold nucleic acid binding domain LPH43_03970 PF01061 ABC-2 type transporter LPH43_03975 PF00005 ABC transporter LPH43_03985 PF01180 Dihydroorotate dehydrogenase LPH43_03990 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LPH43_03990 PF01565 FAD binding domain LPH43_03995 PF00892 EamA-like transporter family LPH43_04000 PF01569 PAP2 superfamily LPH43_04005 PF04551 GcpE protein LPH43_04015 PF00072 Response regulator receiver domain LPH43_04020 PF00889 Elongation factor TS LPH43_04025 PF00318 Ribosomal protein S2 LPH43_04040 PF00664 ABC transporter transmembrane region LPH43_04040 PF00005 ABC transporter LPH43_04060 PF02321 Outer membrane efflux protein LPH43_04065 PF12850 Calcineurin-like phosphoesterase superfamily domain LPH43_04070 PF02541 Ppx/GppA phosphatase family LPH43_04075 PF02503 Polyphosphate kinase middle domain LPH43_04075 PF13090 Polyphosphate kinase C-terminal domain 2 LPH43_04075 PF17941 Polyphosphate kinase C-terminal domain 1 LPH43_04075 PF13089 Polyphosphate kinase N-terminal domain LPH43_04080 PF00512 His Kinase A (phospho-acceptor) domain LPH43_04080 PF00989 PAS fold LPH43_04080 PF11808 Phosphate regulon sensor protein PhoR LPH43_04080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH43_04085 PF00486 Transcriptional regulatory protein, C terminal LPH43_04085 PF00072 Response regulator receiver domain LPH43_04090 PF01435 Peptidase family M48 LPH43_04090 PF13181 Tetratricopeptide repeat LPH43_04095 PF00462 Glutaredoxin LPH43_04100 PF00180 Isocitrate/isopropylmalate dehydrogenase LPH43_04110 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LPH43_04110 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LPH43_04120 PF00037 4Fe-4S binding domain LPH43_04120 PF11953 Domain of unknown function (DUF3470) LPH43_04130 PF01106 NifU-like domain LPH43_04135 PF01329 Pterin 4 alpha carbinolamine dehydratase LPH43_04150 PF01479 S4 domain LPH43_04150 PF00849 RNA pseudouridylate synthase LPH43_04155 PF12111 Polyribonucleotide phosphorylase C terminal LPH43_04155 PF00575 S1 RNA binding domain LPH43_04155 PF10150 Ribonuclease E/G family LPH43_04160 PF00196 Bacterial regulatory proteins, luxR family LPH43_04160 PF00072 Response regulator receiver domain LPH43_04165 PF17773 UPF0176 acylphosphatase like domain LPH43_04175 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LPH43_04175 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LPH43_04180 PF00545 ribonuclease LPH43_04190 PF00005 ABC transporter LPH43_04190 PF16326 ABC transporter C-terminal domain LPH43_04190 PF12848 ABC transporter LPH43_04195 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LPH43_04200 PF00313 'Cold-shock' DNA-binding domain LPH43_04210 PF01435 Peptidase family M48 LPH43_04215 PF03144 Elongation factor Tu domain 2 LPH43_04215 PF03143 Elongation factor Tu C-terminal domain LPH43_04215 PF00009 Elongation factor Tu GTP binding domain LPH43_04220 PF00679 Elongation factor G C-terminus LPH43_04220 PF14492 Elongation Factor G, domain II LPH43_04220 PF00009 Elongation factor Tu GTP binding domain LPH43_04220 PF03144 Elongation factor Tu domain 2 LPH43_04220 PF03764 Elongation factor G, domain IV LPH43_04225 PF00177 Ribosomal protein S7p/S5e LPH43_04230 PF00164 Ribosomal protein S12/S23 LPH43_04235 PF04998 RNA polymerase Rpb1, domain 5 LPH43_04235 PF05000 RNA polymerase Rpb1, domain 4 LPH43_04235 PF04983 RNA polymerase Rpb1, domain 3 LPH43_04235 PF00623 RNA polymerase Rpb1, domain 2 LPH43_04235 PF04997 RNA polymerase Rpb1, domain 1 LPH43_04240 PF04563 RNA polymerase beta subunit LPH43_04240 PF04560 RNA polymerase Rpb2, domain 7 LPH43_04240 PF00562 RNA polymerase Rpb2, domain 6 LPH43_04240 PF10385 RNA polymerase beta subunit external 1 domain LPH43_04240 PF04565 RNA polymerase Rpb2, domain 3 LPH43_04240 PF04561 RNA polymerase Rpb2, domain 2 LPH43_04245 PF16320 Ribosomal protein L7/L12 dimerisation domain LPH43_04245 PF00542 Ribosomal protein L7/L12 C-terminal domain LPH43_04250 PF00466 Ribosomal protein L10 LPH43_04255 PF00687 Ribosomal protein L1p/L10e family LPH43_04260 PF00298 Ribosomal protein L11, RNA binding domain LPH43_04260 PF03946 Ribosomal protein L11, N-terminal domain LPH43_04265 PF00467 KOW motif LPH43_04265 PF02357 Transcription termination factor nusG LPH43_04270 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LPH43_04280 PF03143 Elongation factor Tu C-terminal domain LPH43_04280 PF03144 Elongation factor Tu domain 2 LPH43_04280 PF00009 Elongation factor Tu GTP binding domain LPH43_04300 PF01926 50S ribosome-binding GTPase LPH43_04300 PF06071 Protein of unknown function (DUF933) LPH43_04305 PF01195 Peptidyl-tRNA hydrolase LPH43_04310 PF01386 Ribosomal L25p family LPH43_04310 PF14693 Ribosomal protein TL5, C-terminal domain LPH43_04315 PF14572 Phosphoribosyl synthetase-associated domain LPH43_04315 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LPH43_04325 PF08544 GHMP kinases C terminal LPH43_04325 PF00288 GHMP kinases N terminal domain LPH43_04330 PF03550 Outer membrane lipoprotein LolB LPH43_04340 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LPH43_04340 PF01488 Shikimate / quinate 5-dehydrogenase LPH43_04340 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LPH43_04345 PF03462 PCRF domain LPH43_04345 PF00472 RF-1 domain LPH43_04355 PF01170 Putative RNA methylase family UPF0020 LPH43_04355 PF02926 THUMP domain LPH43_04355 PF10672 S-adenosylmethionine-dependent methyltransferase LPH43_04415 PF00497 Bacterial extracellular solute-binding proteins, family 3 LPH43_04420 PF00528 Binding-protein-dependent transport system inner membrane component LPH43_04425 PF00005 ABC transporter LPH43_04430 PF00528 Binding-protein-dependent transport system inner membrane component LPH43_04435 PF13361 UvrD-like helicase C-terminal domain LPH43_04435 PF00580 UvrD/REP helicase N-terminal domain LPH43_04435 PF12705 PD-(D/E)XK nuclease superfamily LPH43_04445 PF01914 MarC family integral membrane protein LPH43_04450 PF00462 Glutaredoxin LPH43_04455 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LPH43_04455 PF02222 ATP-grasp domain LPH43_04460 PF00731 AIR carboxylase LPH43_04480 PF07731 Multicopper oxidase LPH43_04480 PF07732 Multicopper oxidase LPH43_04490 PF00580 UvrD/REP helicase N-terminal domain LPH43_04490 PF13361 UvrD-like helicase C-terminal domain LPH43_04500 PF04349 Periplasmic glucan biosynthesis protein, MdoG LPH43_04505 PF01343 Peptidase family S49 LPH43_04510 PF01554 MatE LPH43_04525 PF00270 DEAD/DEAH box helicase LPH43_04525 PF00271 Helicase conserved C-terminal domain LPH43_04525 PF17764 3′ DNA-binding domain (3′BD) LPH43_04525 PF18074 Primosomal protein N C-terminal domain LPH43_04525 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LPH43_04530 PF00140 Sigma-70 factor, region 1.2 LPH43_04530 PF04542 Sigma-70 region 2 LPH43_04530 PF04545 Sigma-70, region 4 LPH43_04535 PF03167 Uracil DNA glycosylase superfamily LPH43_04540 PF00072 Response regulator receiver domain LPH43_04540 PF01339 CheB methylesterase LPH43_04545 PF18075 FtsX extracellular domain LPH43_04550 PF00005 ABC transporter LPH43_04555 PF00270 DEAD/DEAH box helicase LPH43_04555 PF00271 Helicase conserved C-terminal domain LPH43_04555 PF12300 ATP-dependent RNA helicase RhlB LPH43_04560 PF00085 Thioredoxin LPH43_04565 PF07497 Rho termination factor, RNA-binding domain LPH43_04565 PF07498 Rho termination factor, N-terminal domain LPH43_04565 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LPH43_04570 PF03971 Monomeric isocitrate dehydrogenase LPH43_04575 PF09704 CRISPR-associated protein (Cas_Cas5) LPH43_04590 PF03572 Peptidase family S41 LPH43_04590 PF13180 PDZ domain LPH43_04595 PF01551 Peptidase family M23 LPH43_04605 PF00150 Cellulase (glycosyl hydrolase family 5) LPH43_04625 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LPH43_04625 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPH43_04630 PF00310 Glutamine amidotransferases class-II LPH43_04630 PF04898 Glutamate synthase central domain LPH43_04630 PF01645 Conserved region in glutamate synthase LPH43_04630 PF01493 GXGXG motif LPH43_04640 PF14748 Pyrroline-5-carboxylate reductase dimerisation LPH43_04640 PF03807 NADP oxidoreductase coenzyme F420-dependent LPH43_04725 PF13332 Hemagglutinin repeat LPH43_04725 PF05860 haemagglutination activity domain LPH43_04725 PF04829 Pre-toxin domain with VENN motif LPH43_04730 PF13018 Extended Signal Peptide of Type V secretion system LPH43_04730 PF13332 Hemagglutinin repeat LPH43_04730 PF05860 haemagglutination activity domain LPH43_04730 PF04829 Pre-toxin domain with VENN motif LPH43_04770 PF12008 Type I restriction and modification enzyme - subunit R C terminal LPH43_04770 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LPH43_04770 PF18766 SWI2/SNF2 ATPase LPH43_04775 PF01420 Type I restriction modification DNA specificity domain LPH43_04785 PF12161 HsdM N-terminal domain LPH43_04785 PF02384 N-6 DNA Methylase LPH43_04870 PF11867 Domain of unknown function (DUF3387) LPH43_04870 PF18766 SWI2/SNF2 ATPase LPH43_04870 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LPH43_04875 PF01420 Type I restriction modification DNA specificity domain LPH43_04880 PF02384 N-6 DNA Methylase LPH43_04885 PF02384 N-6 DNA Methylase LPH43_05000 PF01638 HxlR-like helix-turn-helix LPH43_05005 PF00106 short chain dehydrogenase LPH43_05025 PF00905 Penicillin binding protein transpeptidase domain LPH43_05025 PF00912 Transglycosylase LPH43_05025 PF14814 Bifunctional transglycosylase second domain LPH43_05035 PF04851 Type III restriction enzyme, res subunit LPH43_05035 PF13307 Helicase C-terminal domain LPH43_05045 PF00484 Carbonic anhydrase LPH43_05050 PF00534 Glycosyl transferases group 1 LPH43_05055 PF01522 Polysaccharide deacetylase LPH43_05065 PF00005 ABC transporter LPH43_05065 PF09383 NIL domain LPH43_05070 PF00528 Binding-protein-dependent transport system inner membrane component LPH43_05075 PF03180 NLPA lipoprotein LPH43_05090 PF02817 e3 binding domain LPH43_05090 PF00364 Biotin-requiring enzyme LPH43_05090 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LPH43_05095 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LPH43_05095 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPH43_05105 PF01545 Cation efflux family LPH43_05110 PF01053 Cys/Met metabolism PLP-dependent enzyme LPH43_05115 PF00561 alpha/beta hydrolase fold LPH43_05120 PF01551 Peptidase family M23 LPH43_05130 PF01975 Survival protein SurE LPH43_05145 PF01551 Peptidase family M23 LPH43_05145 PF01476 LysM domain LPH43_05160 PF01168 Alanine racemase, N-terminal domain LPH43_05160 PF00842 Alanine racemase, C-terminal domain LPH43_05165 PF01266 FAD dependent oxidoreductase LPH43_05175 PF01641 SelR domain LPH43_05185 PF00728 Glycosyl hydrolase family 20, catalytic domain LPH43_05185 PF02838 Glycosyl hydrolase family 20, domain 2 LPH43_05185 PF07691 PA14 domain LPH43_05195 PF07691 PA14 domain LPH43_05195 PF01915 Glycosyl hydrolase family 3 C-terminal domain LPH43_05195 PF00933 Glycosyl hydrolase family 3 N terminal domain LPH43_05195 PF14310 Fibronectin type III-like domain LPH43_05210 PF17678 Glycosyl hydrolase family 92 N-terminal domain LPH43_05210 PF07971 Glycosyl hydrolase family 92 LPH43_05215 PF01301 Glycosyl hydrolases family 35 LPH43_05220 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LPH43_05225 PF00639 PPIC-type PPIASE domain LPH43_05225 PF09312 SurA N-terminal domain LPH43_05230 PF04453 LPS transport system D LPH43_05240 PF01494 FAD binding domain LPH43_05245 PF01494 FAD binding domain LPH43_05250 PF06719 AraC-type transcriptional regulator N-terminus LPH43_05250 PF12833 Helix-turn-helix domain LPH43_05255 PF02525 Flavodoxin-like fold LPH43_05265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH43_05265 PF03466 LysR substrate binding domain LPH43_05270 PF10414 Sirohaem synthase dimerisation region LPH43_05270 PF14824 Sirohaem biosynthesis protein central LPH43_05270 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LPH43_05275 PF00291 Pyridoxal-phosphate dependent enzyme LPH43_05285 PF00274 Fructose-bisphosphate aldolase class-I LPH43_05300 PF02887 Pyruvate kinase, alpha/beta domain LPH43_05300 PF00224 Pyruvate kinase, barrel domain LPH43_05305 PF00162 Phosphoglycerate kinase LPH43_05320 PF00749 tRNA synthetases class I (E and Q), catalytic domain LPH43_05325 PF01475 Ferric uptake regulator family LPH43_05340 PF00553 Cellulose binding domain LPH43_05340 PF00150 Cellulase (glycosyl hydrolase family 5) LPH43_05350 PF00675 Insulinase (Peptidase family M16) LPH43_05350 PF05193 Peptidase M16 inactive domain LPH43_05365 PF03330 Lytic transglycolase LPH43_05370 PF07516 SecA Wing and Scaffold domain LPH43_05370 PF01043 SecA preprotein cross-linking domain LPH43_05370 PF07517 SecA DEAD-like domain LPH43_05370 PF02810 SEC-C motif LPH43_05375 PF01551 Peptidase family M23 LPH43_05375 PF08525 Opacity-associated protein A N-terminal motif LPH43_05375 PF01476 LysM domain LPH43_05385 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LPH43_05390 PF00091 Tubulin/FtsZ family, GTPase domain LPH43_05390 PF12327 FtsZ family, C-terminal domain LPH43_05395 PF02491 SHS2 domain inserted in FTSA LPH43_05400 PF03799 Cell division protein FtsQ LPH43_05400 PF08478 POTRA domain, FtsQ-type LPH43_05405 PF07478 D-ala D-ala ligase C-terminus LPH43_05410 PF01225 Mur ligase family, catalytic domain LPH43_05410 PF02875 Mur ligase family, glutamate ligase domain LPH43_05410 PF08245 Mur ligase middle domain LPH43_05415 PF04101 Glycosyltransferase family 28 C-terminal domain LPH43_05415 PF03033 Glycosyltransferase family 28 N-terminal domain LPH43_05420 PF01098 Cell cycle protein LPH43_05425 PF00953 Glycosyl transferase family 4 LPH43_05430 PF08245 Mur ligase middle domain LPH43_05430 PF02875 Mur ligase family, glutamate ligase domain LPH43_05430 PF01225 Mur ligase family, catalytic domain LPH43_05435 PF01225 Mur ligase family, catalytic domain LPH43_05435 PF08245 Mur ligase middle domain LPH43_05435 PF02875 Mur ligase family, glutamate ligase domain LPH43_05440 PF03717 Penicillin-binding Protein dimerisation domain LPH43_05440 PF00905 Penicillin binding protein transpeptidase domain LPH43_05445 PF04999 Cell division protein FtsL LPH43_05450 PF01795 MraW methylase family LPH43_05455 PF02381 MraZ protein, putative antitoxin-like LPH43_05460 PF02080 TrkA-C domain LPH43_05460 PF03600 Citrate transporter LPH43_05465 PF02390 Putative methyltransferase LPH43_05470 PF05690 Thiazole biosynthesis protein ThiG LPH43_05480 PF03797 Autotransporter beta-domain LPH43_05480 PF00657 GDSL-like Lipase/Acylhydrolase LPH43_05510 PF07977 FabA-like domain LPH43_05535 PF00692 dUTPase LPH43_05545 PF01119 DNA mismatch repair protein, C-terminal domain LPH43_05545 PF08676 MutL C terminal dimerisation domain LPH43_05550 PF01520 N-acetylmuramoyl-L-alanine amidase LPH43_05550 PF11741 AMIN domain LPH43_05555 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LPH43_05560 PF03853 YjeF-related protein N-terminus LPH43_05560 PF01256 Carbohydrate kinase LPH43_05565 PF13742 OB-fold nucleic acid binding domain LPH43_05565 PF02601 Exonuclease VII, large subunit LPH43_05580 PF00570 HRDC domain LPH43_05580 PF01612 3'-5' exonuclease LPH43_05610 PF00216 Bacterial DNA-binding protein LPH43_05615 PF03147 Ferredoxin-fold anticodon binding domain LPH43_05615 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LPH43_05615 PF01588 Putative tRNA binding domain LPH43_05615 PF03484 tRNA synthetase B5 domain LPH43_05615 PF03483 B3/4 domain LPH43_05620 PF01409 tRNA synthetases class II core domain (F) LPH43_05620 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LPH43_05625 PF00453 Ribosomal protein L20 LPH43_05630 PF01632 Ribosomal protein L35 LPH43_05635 PF00707 Translation initiation factor IF-3, C-terminal domain LPH43_05635 PF05198 Translation initiation factor IF-3, N-terminal domain LPH43_05640 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LPH43_05640 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LPH43_05640 PF02824 TGS domain LPH43_05640 PF03129 Anticodon binding domain LPH43_05660 PF18030 RimK PreATP-grasp domain LPH43_05660 PF08443 RimK-like ATP-grasp domain LPH43_05665 PF00486 Transcriptional regulatory protein, C terminal LPH43_05665 PF00072 Response regulator receiver domain LPH43_05670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH43_05670 PF00512 His Kinase A (phospho-acceptor) domain LPH43_05670 PF00989 PAS fold LPH43_05670 PF11808 Phosphate regulon sensor protein PhoR LPH43_05675 PF01121 Dephospho-CoA kinase LPH43_05680 PF06750 Bacterial Peptidase A24 N-terminal domain LPH43_05680 PF01478 Type IV leader peptidase family LPH43_05685 PF00482 Type II secretion system (T2SS), protein F LPH43_05690 PF00114 Pilin (bacterial filament) LPH43_05690 PF07963 Prokaryotic N-terminal methylation motif LPH43_05700 PF07963 Prokaryotic N-terminal methylation motif LPH43_05700 PF00114 Pilin (bacterial filament) LPH43_05705 PF00114 Pilin (bacterial filament) LPH43_05705 PF07963 Prokaryotic N-terminal methylation motif LPH43_05715 PF00437 Type II/IV secretion system protein LPH43_05715 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LPH43_05720 PF02954 Bacterial regulatory protein, Fis family LPH43_05720 PF00072 Response regulator receiver domain LPH43_05720 PF00158 Sigma-54 interaction domain LPH43_05725 PF00512 His Kinase A (phospho-acceptor) domain LPH43_05725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH43_05730 PF00549 CoA-ligase LPH43_05730 PF08442 ATP-grasp domain LPH43_05735 PF00549 CoA-ligase LPH43_05735 PF02629 CoA binding domain LPH43_05740 PF01926 50S ribosome-binding GTPase LPH43_05740 PF12631 MnmE helical domain LPH43_05740 PF10396 GTP-binding protein TrmE N-terminus LPH43_05750 PF02096 60Kd inner membrane protein LPH43_05750 PF14849 YidC periplasmic domain LPH43_05755 PF00825 Ribonuclease P LPH43_05760 PF00468 Ribosomal protein L34 LPH43_05765 PF00308 Bacterial dnaA protein LPH43_05765 PF08299 Bacterial dnaA protein helix-turn-helix LPH43_05765 PF11638 DnaA N-terminal domain LPH43_05770 PF02767 DNA polymerase III beta subunit, central domain LPH43_05770 PF00712 DNA polymerase III beta subunit, N-terminal domain LPH43_05770 PF02768 DNA polymerase III beta subunit, C-terminal domain LPH43_05775 PF02463 RecF/RecN/SMC N terminal domain LPH43_05780 PF00204 DNA gyrase B LPH43_05780 PF00986 DNA gyrase B subunit, carboxyl terminus LPH43_05780 PF18053 DNA gyrase B subunit insert domain LPH43_05780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH43_05780 PF01751 Toprim domain LPH43_05790 PF01435 Peptidase family M48 LPH43_05800 PF03544 Gram-negative bacterial TonB protein C-terminal LPH43_05805 PF01618 MotA/TolQ/ExbB proton channel family LPH43_05810 PF02472 Biopolymer transport protein ExbD/TolR LPH43_05815 PF02472 Biopolymer transport protein ExbD/TolR LPH43_05835 PF01218 Coproporphyrinogen III oxidase LPH43_05860 PF00793 DAHP synthetase I family LPH43_05865 PF07963 Prokaryotic N-terminal methylation motif LPH43_05865 PF00114 Pilin (bacterial filament) LPH43_05885 PF05567 Neisseria PilC beta-propeller domain LPH43_05890 PF00114 Pilin (bacterial filament) LPH43_05890 PF07963 Prokaryotic N-terminal methylation motif LPH43_05895 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LPH43_05900 PF00155 Aminotransferase class I and II LPH43_05905 PF01741 Large-conductance mechanosensitive channel, MscL LPH43_05930 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ LPH43_05940 PF17757 UvrB interaction domain LPH43_05940 PF03461 TRCF domain LPH43_05940 PF00271 Helicase conserved C-terminal domain LPH43_05940 PF00270 DEAD/DEAH box helicase LPH43_05940 PF02559 CarD-like/TRCF domain LPH43_05945 PF01220 Dehydroquinase class II LPH43_05950 PF00364 Biotin-requiring enzyme LPH43_05955 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LPH43_05955 PF00289 Biotin carboxylase, N-terminal domain LPH43_05955 PF02785 Biotin carboxylase C-terminal domain LPH43_05960 PF13361 UvrD-like helicase C-terminal domain LPH43_05960 PF00580 UvrD/REP helicase N-terminal domain LPH43_05965 PF00970 Oxidoreductase FAD-binding domain LPH43_05965 PF00175 Oxidoreductase NAD-binding domain LPH43_05965 PF00042 Globin LPH43_05975 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ LPH43_05985 PF08535 KorB domain LPH43_05985 PF06613 KorB C-terminal beta-barrel domain LPH43_05985 PF02195 ParB-like nuclease domain LPH43_06000 PF06968 Biotin and Thiamin Synthesis associated domain LPH43_06000 PF04055 Radical SAM superfamily LPH43_06005 PF01734 Patatin-like phospholipase LPH43_06010 PF01040 UbiA prenyltransferase family LPH43_06025 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family LPH43_06060 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LPH43_06060 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LPH43_06070 PF02881 SRP54-type protein, helical bundle domain LPH43_06070 PF02978 Signal peptide binding domain LPH43_06070 PF00448 SRP54-type protein, GTPase domain LPH43_06090 PF00577 Outer membrane usher protein LPH43_06090 PF13954 PapC N-terminal domain LPH43_06090 PF13953 PapC C-terminal domain LPH43_06095 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LPH43_06095 PF02753 Pili assembly chaperone PapD, C-terminal domain LPH43_06100 PF16970 Type-1 fimbrial protein, A LPH43_06105 PF02464 Competence-damaged protein LPH43_06110 PF00083 Sugar (and other) transporter LPH43_06115 PF01926 50S ribosome-binding GTPase LPH43_06115 PF13167 GTP-binding GTPase N-terminal LPH43_06115 PF16360 GTP-binding GTPase Middle Region LPH43_06120 PF17209 Hfq protein LPH43_06130 PF00809 Pterin binding enzyme LPH43_06135 PF00004 ATPase family associated with various cellular activities (AAA) LPH43_06135 PF06480 FtsH Extracellular LPH43_06135 PF01434 Peptidase family M41 LPH43_06135 PF17862 AAA+ lid domain LPH43_06140 PF01728 FtsJ-like methyltransferase LPH43_06145 PF01985 CRS1 / YhbY (CRM) domain LPH43_06160 PF00920 Dehydratase family LPH43_06190 PF03279 Bacterial lipid A biosynthesis acyltransferase LPH43_06195 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) LPH43_06210 PF00886 Ribosomal protein S16 LPH43_06215 PF01782 RimM N-terminal domain LPH43_06215 PF05239 PRC-barrel domain LPH43_06220 PF01746 tRNA (Guanine-1)-methyltransferase LPH43_06225 PF01245 Ribosomal protein L19 LPH43_06230 PF00557 Metallopeptidase family M24 LPH43_06240 PF14602 Hexapeptide repeat of succinyl-transferase LPH43_06240 PF00132 Bacterial transferase hexapeptide (six repeats) LPH43_06240 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal LPH43_06245 PF03960 ArsC family LPH43_06250 PF01546 Peptidase family M20/M25/M40 LPH43_06250 PF07687 Peptidase dimerisation domain LPH43_06255 PF13537 Glutamine amidotransferase domain LPH43_06255 PF00733 Asparagine synthase LPH43_06265 PF03060 Nitronate monooxygenase LPH43_06275 PF00717 Peptidase S24-like LPH43_06275 PF01726 LexA DNA binding domain LPH43_06280 PF00154 recA bacterial DNA recombination protein LPH43_06285 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LPH43_06285 PF01411 tRNA synthetases class II (A) LPH43_06285 PF02272 DHHA1 domain LPH43_06290 PF02599 Global regulator protein family LPH43_06300 PF01432 Peptidase family M3 LPH43_06315 PF07731 Multicopper oxidase LPH43_06315 PF07732 Multicopper oxidase LPH43_06315 PF00394 Multicopper oxidase LPH43_06320 PF05275 Copper resistance protein B precursor (CopB) LPH43_06325 PF08264 Anticodon-binding domain of tRNA LPH43_06325 PF00133 tRNA synthetases class I (I, L, M and V) LPH43_06325 PF10458 Valyl tRNA synthetase tRNA binding arm LPH43_06345 PF00883 Cytosol aminopeptidase family, catalytic domain LPH43_06345 PF02789 Cytosol aminopeptidase family, N-terminal domain LPH43_06365 PF01380 SIS domain LPH43_06380 PF17284 Spermidine synthase tetramerisation domain LPH43_06385 PF17810 Arginine decarboxylase helical bundle domain LPH43_06385 PF17944 Arginine decarboxylase C-terminal helical extension LPH43_06385 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LPH43_06390 PF00106 short chain dehydrogenase LPH43_06400 PF03485 Arginyl tRNA synthetase N terminal domain LPH43_06400 PF00750 tRNA synthetases class I (R) LPH43_06400 PF05746 DALR anticodon binding domain LPH43_06405 PF04002 RadC-like JAB domain LPH43_06410 PF04127 DNA / pantothenate metabolism flavoprotein LPH43_06410 PF02441 Flavoprotein LPH43_06415 PF00692 dUTPase LPH43_06420 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LPH43_06420 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LPH43_06420 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LPH43_06420 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LPH43_06430 PF00156 Phosphoribosyl transferase domain LPH43_06475 PF07690 Major Facilitator Superfamily LPH43_06480 PF03702 Anhydro-N-acetylmuramic acid kinase LPH43_06485 PF04225 Opacity-associated protein A LysM-like domain LPH43_06485 PF01551 Peptidase family M23 LPH43_06490 PF00579 tRNA synthetases class I (W and Y) LPH43_06520 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LPH43_06520 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LPH43_06550 PF16658 Class II release factor RF3, C-terminal domain LPH43_06550 PF00009 Elongation factor Tu GTP binding domain LPH43_06555 PF03006 Haemolysin-III related LPH43_06560 PF00535 Glycosyl transferase family 2 LPH43_06565 PF01026 TatD related DNase LPH43_06580 PF01597 Glycine cleavage H-protein LPH43_06585 PF08669 Glycine cleavage T-protein C-terminal barrel domain LPH43_06585 PF01571 Aminomethyltransferase folate-binding domain LPH43_06595 PF16200 C-terminal region of band_7 LPH43_06595 PF01145 SPFH domain / Band 7 family LPH43_06600 PF03819 MazG nucleotide pyrophosphohydrolase domain LPH43_06605 PF00459 Inositol monophosphatase family LPH43_06610 PF00293 NUDIX domain LPH43_06615 PF00202 Aminotransferase class-III LPH43_06620 PF04452 RNA methyltransferase LPH43_06630 PF00271 Helicase conserved C-terminal domain LPH43_06630 PF00270 DEAD/DEAH box helicase LPH43_06635 PF01242 6-pyruvoyl tetrahydropterin synthase LPH43_06660 PF03653 Uncharacterised protein family (UPF0093) LPH43_06665 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LPH43_06670 PF14579 Helix-hairpin-helix motif LPH43_06670 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LPH43_06670 PF01336 OB-fold nucleic acid binding domain LPH43_06670 PF02811 PHP domain LPH43_06670 PF07733 Bacterial DNA polymerase III alpha NTPase domain LPH43_06675 PF01259 SAICAR synthetase LPH43_06680 PF05099 Tellurite resistance protein TerB LPH43_06680 PF00226 DnaJ domain LPH43_06685 PF00834 Ribulose-phosphate 3 epimerase family LPH43_06695 PF04715 Anthranilate synthase component I, N terminal region LPH43_06695 PF00425 chorismate binding enzyme LPH43_06700 PF00117 Glutamine amidotransferase class-I LPH43_06705 PF00591 Glycosyl transferase family, a/b domain LPH43_06705 PF02885 Glycosyl transferase family, helical bundle domain LPH43_06710 PF00218 Indole-3-glycerol phosphate synthase LPH43_06725 PF12849 PBP superfamily domain LPH43_06745 PF01321 Creatinase/Prolidase N-terminal domain LPH43_06745 PF00557 Metallopeptidase family M24 LPH43_06760 PF01702 Queuine tRNA-ribosyltransferase LPH43_06765 PF02699 Preprotein translocase subunit LPH43_06770 PF07549 SecD/SecF GG Motif LPH43_06770 PF13721 SecD export protein N-terminal TM region LPH43_06770 PF02355 Protein export membrane protein LPH43_06775 PF07549 SecD/SecF GG Motif LPH43_06775 PF02355 Protein export membrane protein LPH43_06785 PF01743 Poly A polymerase head domain LPH43_06785 PF12626 Polymerase A arginine-rich C-terminus LPH43_06785 PF12627 Probable RNA and SrmB- binding site of polymerase A LPH43_06790 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LPH43_06795 PF02548 Ketopantoate hydroxymethyltransferase LPH43_06800 PF02569 Pantoate-beta-alanine ligase LPH43_06805 PF02261 Aspartate decarboxylase LPH43_06810 PF00342 Phosphoglucose isomerase LPH43_06820 PF17384 RimP C-terminal SH3 domain LPH43_06820 PF02576 RimP N-terminal domain LPH43_06825 PF00575 S1 RNA binding domain LPH43_06825 PF13184 NusA-like KH domain LPH43_06825 PF08529 NusA N-terminal domain LPH43_06830 PF00009 Elongation factor Tu GTP binding domain LPH43_06830 PF11987 Translation-initiation factor 2 LPH43_06830 PF04760 Translation initiation factor IF-2, N-terminal region LPH43_06830 PF08364 Bacterial translation initiation factor IF-2 associated region LPH43_06835 PF02033 Ribosome-binding factor A LPH43_06840 PF16198 tRNA pseudouridylate synthase B C-terminal domain LPH43_06840 PF01509 TruB family pseudouridylate synthase (N terminal domain) LPH43_06840 PF09157 Pseudouridine synthase II TruB, C-terminal LPH43_06845 PF00312 Ribosomal protein S15 LPH43_06850 PF00013 KH domain LPH43_06850 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LPH43_06850 PF01138 3' exoribonuclease family, domain 1 LPH43_06850 PF03725 3' exoribonuclease family, domain 2 LPH43_06850 PF00575 S1 RNA binding domain LPH43_06855 PF01638 HxlR-like helix-turn-helix LPH43_06860 PF05368 NmrA-like family LPH43_06865 PF00873 AcrB/AcrD/AcrF family LPH43_06875 PF00999 Sodium/hydrogen exchanger family LPH43_06895 PF00271 Helicase conserved C-terminal domain LPH43_06895 PF00270 DEAD/DEAH box helicase LPH43_06895 PF03880 DbpA RNA binding domain LPH43_06900 PF00766 Electron transfer flavoprotein FAD-binding domain LPH43_06900 PF01012 Electron transfer flavoprotein domain LPH43_06905 PF01012 Electron transfer flavoprotein domain LPH43_06910 PF16363 GDP-mannose 4,6 dehydratase LPH43_06915 PF00483 Nucleotidyl transferase LPH43_06920 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LPH43_06925 PF04321 RmlD substrate binding domain LPH43_06930 PF01050 Mannose-6-phosphate isomerase LPH43_06930 PF00483 Nucleotidyl transferase LPH43_06935 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LPH43_06935 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LPH43_06935 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LPH43_06935 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LPH43_06990 PF00082 Subtilase family LPH43_06990 PF03797 Autotransporter beta-domain LPH43_06990 PF12951 Passenger-associated-transport-repeat LPH43_06995 PF00082 Subtilase family LPH43_06995 PF12951 Passenger-associated-transport-repeat LPH43_06995 PF03797 Autotransporter beta-domain LPH43_07000 PF06779 Uncharacterised MFS-type transporter YbfB LPH43_07005 PF07669 Eco57I restriction-modification methylase LPH43_07015 PF00365 Phosphofructokinase LPH43_07025 PF08245 Mur ligase middle domain LPH43_07025 PF02875 Mur ligase family, glutamate ligase domain LPH43_07025 PF01225 Mur ligase family, catalytic domain LPH43_07030 PF01569 PAP2 superfamily LPH43_07050 PF00892 EamA-like transporter family LPH43_07055 PF02789 Cytosol aminopeptidase family, N-terminal domain LPH43_07055 PF00883 Cytosol aminopeptidase family, catalytic domain LPH43_07065 PF01594 AI-2E family transporter LPH43_07085 PF00595 PDZ domain LPH43_07090 PF01370 NAD dependent epimerase/dehydratase family LPH43_07090 PF08338 Domain of unknown function (DUF1731) LPH43_07095 PF13193 AMP-binding enzyme C-terminal domain LPH43_07095 PF00501 AMP-binding enzyme LPH43_07100 PF00694 Aconitase C-terminal domain LPH43_07100 PF00330 Aconitase family (aconitate hydratase) LPH43_07115 PF11791 Aconitate B N-terminal domain LPH43_07115 PF06434 Aconitate hydratase 2 N-terminus LPH43_07115 PF00330 Aconitase family (aconitate hydratase) LPH43_07130 PF02384 N-6 DNA Methylase LPH43_07135 PF01420 Type I restriction modification DNA specificity domain LPH43_07150 PF18766 SWI2/SNF2 ATPase LPH43_07150 PF11867 Domain of unknown function (DUF3387) LPH43_07150 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LPH43_07170 PF00121 Triosephosphate isomerase LPH43_07185 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LPH43_07190 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LPH43_07195 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LPH43_07200 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LPH43_07210 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LPH43_07210 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LPH43_07210 PF10531 SLBB domain LPH43_07215 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal LPH43_07215 PF00384 Molybdopterin oxidoreductase LPH43_07215 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LPH43_07220 PF00146 NADH dehydrogenase LPH43_07225 PF12838 4Fe-4S dicluster domain LPH43_07230 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LPH43_07235 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LPH43_07240 PF00361 Proton-conducting membrane transporter LPH43_07240 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LPH43_07245 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus LPH43_07245 PF00361 Proton-conducting membrane transporter LPH43_07250 PF00361 Proton-conducting membrane transporter LPH43_07255 PF00106 short chain dehydrogenase LPH43_07260 PF03600 Citrate transporter LPH43_07270 PF00486 Transcriptional regulatory protein, C terminal LPH43_07270 PF00072 Response regulator receiver domain LPH43_07275 PF08521 Two-component sensor kinase N-terminal LPH43_07275 PF00512 His Kinase A (phospho-acceptor) domain LPH43_07275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH43_07285 PF00196 Bacterial regulatory proteins, luxR family LPH43_07285 PF00072 Response regulator receiver domain LPH43_07290 PF00672 HAMP domain LPH43_07290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH43_07290 PF00512 His Kinase A (phospho-acceptor) domain LPH43_07290 PF00072 Response regulator receiver domain LPH43_07290 PF01627 Hpt domain LPH43_07300 PF00375 Sodium:dicarboxylate symporter family LPH43_07305 PF01515 Phosphate acetyl/butaryl transferase LPH43_07305 PF03949 Malic enzyme, NAD binding domain LPH43_07305 PF00390 Malic enzyme, N-terminal domain LPH43_07310 PF00183 Hsp90 protein LPH43_07310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH43_07320 PF01467 Cytidylyltransferase-like LPH43_07330 PF00037 4Fe-4S binding domain LPH43_07340 PF00990 Diguanylate cyclase, GGDEF domain LPH43_07345 PF01551 Peptidase family M23 LPH43_07345 PF01476 LysM domain LPH43_07350 PF01979 Amidohydrolase family LPH43_07355 PF01809 Putative membrane protein insertion efficiency factor LPH43_07360 PF01258 Prokaryotic dksA/traR C4-type zinc finger LPH43_07390 PF02657 Fe-S metabolism associated domain LPH43_07395 PF09190 DALR domain LPH43_07395 PF01406 tRNA synthetases class I (C) catalytic domain LPH43_07405 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LPH43_07405 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LPH43_07410 PF00764 Arginosuccinate synthase LPH43_07415 PF07687 Peptidase dimerisation domain LPH43_07415 PF01546 Peptidase family M20/M25/M40 LPH43_07420 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase LPH43_07420 PF00696 Amino acid kinase family LPH43_07430 PF01118 Semialdehyde dehydrogenase, NAD binding domain LPH43_07435 PF00206 Lyase LPH43_07445 PF01472 PUA domain LPH43_07445 PF00696 Amino acid kinase family LPH43_07450 PF00171 Aldehyde dehydrogenase family LPH43_07460 PF02796 Helix-turn-helix domain of resolvase LPH43_07460 PF00239 Resolvase, N terminal domain LPH43_07485 PF00239 Resolvase, N terminal domain LPH43_07485 PF02796 Helix-turn-helix domain of resolvase LPH43_07500 PF13700 Domain of unknown function (DUF4158) LPH43_07500 PF01526 Tn3 transposase DDE domain LPH43_07530 PF03524 Conjugal transfer protein LPH43_07570 PF01593 Flavin containing amine oxidoreductase LPH43_07580 PF02627 Carboxymuconolactone decarboxylase family LPH43_07600 PF03466 LysR substrate binding domain LPH43_07600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH43_07605 PF05016 ParE toxin of type II toxin-antitoxin system, parDE LPH43_07610 PF09386 Antitoxin ParD LPH43_07615 PF02796 Helix-turn-helix domain of resolvase LPH43_07615 PF00239 Resolvase, N terminal domain LPH43_07640 PF02796 Helix-turn-helix domain of resolvase LPH43_07640 PF00239 Resolvase, N terminal domain LPH43_07680 PF06594 Haemolysin-type calcium binding protein related domain LPH43_07680 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) LPH43_07685 PF14437 MafB19-like deaminase LPH43_07690 PF02742 Iron dependent repressor, metal binding and dimerisation domain LPH43_07690 PF01325 Iron dependent repressor, N-terminal DNA binding domain LPH43_07695 PF01566 Natural resistance-associated macrophage protein LPH43_07710 PF04377 Arginine-tRNA-protein transferase, C terminus LPH43_07710 PF04376 Arginine-tRNA-protein transferase, N terminus LPH43_07745 PF00082 Subtilase family LPH43_07745 PF12951 Passenger-associated-transport-repeat LPH43_07745 PF03797 Autotransporter beta-domain LPH43_07770 PF01553 Acyltransferase LPH43_07785 PF05221 S-adenosyl-L-homocysteine hydrolase LPH43_07785 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain LPH43_07800 PF01351 Ribonuclease HII LPH43_07805 PF02684 Lipid-A-disaccharide synthetase LPH43_07810 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LPH43_07810 PF00132 Bacterial transferase hexapeptide (six repeats) LPH43_07815 PF07977 FabA-like domain LPH43_07820 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LPH43_07820 PF00132 Bacterial transferase hexapeptide (six repeats) LPH43_07825 PF07244 Surface antigen variable number repeat LPH43_07825 PF01103 Surface antigen LPH43_07830 PF17820 PDZ domain LPH43_07830 PF02163 Peptidase family M50 LPH43_07835 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LPH43_07835 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LPH43_07835 PF13288 DXP reductoisomerase C-terminal domain LPH43_07845 PF01255 Putative undecaprenyl diphosphate synthase LPH43_07850 PF01765 Ribosome recycling factor LPH43_07875 PF04305 Protein of unknown function (DUF455) LPH43_07880 PF00696 Amino acid kinase family LPH43_07950 PF01081 KDPG and KHG aldolase LPH43_07955 PF00920 Dehydratase family LPH43_07960 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LPH43_07965 PF02685 Glucokinase LPH43_07970 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LPH43_07970 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LPH43_07990 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LPH43_07995 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LPH43_08000 PF02910 Fumarate reductase flavoprotein C-term LPH43_08000 PF00890 FAD binding domain LPH43_08005 PF13237 4Fe-4S dicluster domain LPH43_08005 PF13085 2Fe-2S iron-sulfur cluster binding domain LPH43_08010 PF03937 Flavinator of succinate dehydrogenase LPH43_08020 PF12704 MacB-like periplasmic core domain LPH43_08020 PF02687 FtsX-like permease family LPH43_08025 PF00005 ABC transporter LPH43_08030 PF03772 Competence protein LPH43_08030 PF00753 Metallo-beta-lactamase superfamily LPH43_08045 PF00664 ABC transporter transmembrane region LPH43_08045 PF00005 ABC transporter LPH43_08050 PF02606 Tetraacyldisaccharide-1-P 4'-kinase LPH43_08055 PF01883 Iron-sulfur cluster assembly protein LPH43_08055 PF10609 NUBPL iron-transfer P-loop NTPase LPH43_08070 PF13091 PLD-like domain LPH43_08095 PF03358 NADPH-dependent FMN reductase LPH43_08100 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LPH43_08100 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LPH43_08115 PF01300 Telomere recombination LPH43_08120 PF01751 Toprim domain LPH43_08120 PF13368 Topoisomerase C-terminal repeat LPH43_08120 PF01131 DNA topoisomerase LPH43_08130 PF04361 Protein of unknown function (DUF494) LPH43_08135 PF17782 DprA winged helix domain LPH43_08135 PF02481 DNA recombination-mediator protein A LPH43_08145 PF01327 Polypeptide deformylase LPH43_08150 PF02911 Formyl transferase, C-terminal domain LPH43_08150 PF00551 Formyl transferase LPH43_08155 PF01189 16S rRNA methyltransferase RsmB/F LPH43_08155 PF01029 NusB family LPH43_08160 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase LPH43_08175 PF07963 Prokaryotic N-terminal methylation motif LPH43_08175 PF00114 Pilin (bacterial filament) LPH43_08295 PF01367 5'-3' exonuclease, C-terminal SAM fold LPH43_08295 PF01612 3'-5' exonuclease LPH43_08295 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LPH43_08295 PF00476 DNA polymerase family A LPH43_08300 PF05173 Dihydrodipicolinate reductase, C-terminus LPH43_08300 PF01113 Dihydrodipicolinate reductase, N-terminus LPH43_08305 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LPH43_08305 PF00117 Glutamine amidotransferase class-I LPH43_08310 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LPH43_08310 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LPH43_08310 PF02142 MGS-like domain LPH43_08315 PF01272 Transcription elongation factor, GreA/GreB, C-term LPH43_08315 PF03449 Transcription elongation factor, N-terminal LPH43_08325 PF01368 DHH family LPH43_08325 PF17768 RecJ OB domain LPH43_08325 PF02272 DHHA1 domain LPH43_08335 PF01336 OB-fold nucleic acid binding domain LPH43_08335 PF00152 tRNA synthetases class II (D, K and N) LPH43_08340 PF00072 Response regulator receiver domain LPH43_08345 PF00512 His Kinase A (phospho-acceptor) domain LPH43_08345 PF00072 Response regulator receiver domain LPH43_08345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH43_08345 PF01627 Hpt domain LPH43_08350 PF00378 Enoyl-CoA hydratase/isomerase LPH43_08355 PF00696 Amino acid kinase family LPH43_08355 PF01842 ACT domain LPH43_08365 PF08245 Mur ligase middle domain LPH43_08385 PF00293 NUDIX domain LPH43_08395 PF02219 Methylenetetrahydrofolate reductase LPH43_08405 PF02545 Maf-like protein LPH43_08410 PF10150 Ribonuclease E/G family LPH43_08410 PF00575 S1 RNA binding domain LPH43_08420 PF01523 Putative modulator of DNA gyrase LPH43_08425 PF04751 Protein of unknown function (DUF615) LPH43_08430 PF01523 Putative modulator of DNA gyrase LPH43_08440 PF06250 YhcG PDDEXK nuclease domain LPH43_08440 PF17761 DUF1016 N-terminal domain LPH43_08465 PF03466 LysR substrate binding domain LPH43_08465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH43_08470 PF03358 NADPH-dependent FMN reductase LPH43_08480 PF00107 Zinc-binding dehydrogenase LPH43_08480 PF08240 Alcohol dehydrogenase GroES-like domain LPH43_08495 PF00248 Aldo/keto reductase family LPH43_08510 PF14602 Hexapeptide repeat of succinyl-transferase LPH43_08510 PF00132 Bacterial transferase hexapeptide (six repeats) LPH43_08510 PF12804 MobA-like NTP transferase domain LPH43_08520 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LPH43_08520 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LPH43_08525 PF02874 ATP synthase alpha/beta family, beta-barrel domain LPH43_08525 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LPH43_08530 PF00231 ATP synthase LPH43_08535 PF00306 ATP synthase alpha/beta chain, C terminal domain LPH43_08535 PF02874 ATP synthase alpha/beta family, beta-barrel domain LPH43_08535 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LPH43_08540 PF00213 ATP synthase delta (OSCP) subunit LPH43_08545 PF00430 ATP synthase B/B' CF(0) LPH43_08550 PF00137 ATP synthase subunit C LPH43_08555 PF00119 ATP synthase A chain LPH43_08565 PF00338 Ribosomal protein S10p/S20e LPH43_08570 PF00297 Ribosomal protein L3 LPH43_08575 PF00573 Ribosomal protein L4/L1 family LPH43_08580 PF00276 Ribosomal protein L23 LPH43_08585 PF03947 Ribosomal Proteins L2, C-terminal domain LPH43_08585 PF00181 Ribosomal Proteins L2, RNA binding domain LPH43_08590 PF00203 Ribosomal protein S19 LPH43_08595 PF00237 Ribosomal protein L22p/L17e LPH43_08600 PF07650 KH domain LPH43_08600 PF00189 Ribosomal protein S3, C-terminal domain LPH43_08605 PF00252 Ribosomal protein L16p/L10e LPH43_08610 PF00831 Ribosomal L29 protein LPH43_08615 PF00366 Ribosomal protein S17 LPH43_08620 PF00238 Ribosomal protein L14p/L23e LPH43_08625 PF00467 KOW motif LPH43_08625 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LPH43_08630 PF00281 Ribosomal protein L5 LPH43_08630 PF00673 ribosomal L5P family C-terminus LPH43_08635 PF00253 Ribosomal protein S14p/S29e LPH43_08640 PF00410 Ribosomal protein S8 LPH43_08645 PF00347 Ribosomal protein L6 LPH43_08650 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LPH43_08655 PF03719 Ribosomal protein S5, C-terminal domain LPH43_08655 PF00333 Ribosomal protein S5, N-terminal domain LPH43_08660 PF00327 Ribosomal protein L30p/L7e LPH43_08665 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LPH43_08670 PF00344 SecY translocase LPH43_08675 PF00416 Ribosomal protein S13/S18 LPH43_08680 PF00411 Ribosomal protein S11 LPH43_08685 PF01479 S4 domain LPH43_08685 PF00163 Ribosomal protein S4/S9 N-terminal domain LPH43_08690 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LPH43_08690 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LPH43_08690 PF01000 RNA polymerase Rpb3/RpoA insert domain LPH43_08695 PF01196 Ribosomal protein L17 LPH43_08700 PF04380 Membrane fusogenic activity LPH43_08705 PF13335 Magnesium chelatase, subunit ChlI C-terminal LPH43_08705 PF01078 Magnesium chelatase, subunit ChlI LPH43_08710 PF00561 alpha/beta hydrolase fold LPH43_08725 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LPH43_08725 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LPH43_08725 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LPH43_08740 PF05698 Bacterial trigger factor protein (TF) C-terminus LPH43_08740 PF05697 Bacterial trigger factor protein (TF) LPH43_08745 PF00574 Clp protease LPH43_08750 PF06689 ClpX C4-type zinc finger LPH43_08750 PF10431 C-terminal, D2-small domain, of ClpB protein LPH43_08750 PF07724 AAA domain (Cdc48 subfamily) LPH43_08755 PF05362 Lon protease (S16) C-terminal proteolytic domain LPH43_08755 PF02190 ATP-dependent protease La (LON) substrate-binding domain LPH43_08755 PF00004 ATPase family associated with various cellular activities (AAA) LPH43_08760 PF00216 Bacterial DNA-binding protein LPH43_08785 PF00317 Ribonucleotide reductase, all-alpha domain LPH43_08785 PF03477 ATP cone domain LPH43_08785 PF02867 Ribonucleotide reductase, barrel domain LPH43_08790 PF00268 Ribonucleotide reductase, small chain LPH43_08815 PF01479 S4 domain LPH43_08815 PF00849 RNA pseudouridylate synthase LPH43_08820 PF13419 Haloacid dehalogenase-like hydrolase LPH43_08835 PF00830 Ribosomal L28 family LPH43_08840 PF00471 Ribosomal protein L33 LPH43_08845 PF13396 Phospholipase_D-nuclease N-terminal LPH43_08845 PF13091 PLD-like domain LPH43_08860 PF07963 Prokaryotic N-terminal methylation motif LPH43_08860 PF00114 Pilin (bacterial filament) LPH43_08880 PF01612 3'-5' exonuclease LPH43_08880 PF01367 5'-3' exonuclease, C-terminal SAM fold LPH43_08880 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LPH43_08880 PF00476 DNA polymerase family A LPH43_08900 PF00959 Phage lysozyme LPH43_08920 PF01555 DNA methylase LPH43_08940 PF02798 Glutathione S-transferase, N-terminal domain LPH43_08940 PF00043 Glutathione S-transferase, C-terminal domain LPH43_08945 PF00056 lactate/malate dehydrogenase, NAD binding domain LPH43_08945 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LPH43_08950 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LPH43_08955 PF00679 Elongation factor G C-terminus LPH43_08955 PF03144 Elongation factor Tu domain 2 LPH43_08955 PF00009 Elongation factor Tu GTP binding domain LPH43_08970 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LPH43_08970 PF00529 HlyD membrane-fusion protein of T1SS LPH43_08995 PF00664 ABC transporter transmembrane region LPH43_08995 PF03412 Peptidase C39 family LPH43_08995 PF00005 ABC transporter LPH43_09000 PF01061 ABC-2 type transporter LPH43_09005 PF00005 ABC transporter LPH43_09010 PF05567 Neisseria PilC beta-propeller domain LPH43_09025 PF08482 ATP-dependent helicase C-terminal LPH43_09025 PF00271 Helicase conserved C-terminal domain LPH43_09025 PF04408 Helicase associated domain (HA2) LPH43_09025 PF00270 DEAD/DEAH box helicase LPH43_09035 PF13185 GAF domain LPH43_09040 PF17243 POTRA domain TamA domain 1 LPH43_09040 PF01103 Surface antigen LPH43_09045 PF04357 TamB, inner membrane protein subunit of TAM complex LPH43_09060 PF00285 Citrate synthase, C-terminal domain LPH43_09065 PF00330 Aconitase family (aconitate hydratase) LPH43_09065 PF00694 Aconitase C-terminal domain LPH43_09070 PF04303 PrpF protein LPH43_09090 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain LPH43_09090 PF00207 Alpha-2-macroglobulin family LPH43_09090 PF11974 Bacterial alpha-2-macroglobulin MG3 domain LPH43_09090 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain LPH43_09090 PF17962 Bacterial macroglobulin domain 6 LPH43_09090 PF01835 MG2 domain LPH43_09090 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain LPH43_09090 PF07703 Alpha-2-macroglobulin bait region domain LPH43_09095 PF02583 Metal-sensitive transcriptional repressor LPH43_09100 PF03824 High-affinity nickel-transport protein LPH43_09105 PF07859 alpha/beta hydrolase fold LPH43_09110 PF12833 Helix-turn-helix domain LPH43_09110 PF12852 Cupin LPH43_09125 PF01447 Thermolysin metallopeptidase, catalytic domain LPH43_09125 PF02868 Thermolysin metallopeptidase, alpha-helical domain LPH43_09125 PF16485 Protealysin propeptide LPH43_09130 PF00929 Exonuclease LPH43_09135 PF00924 Mechanosensitive ion channel LPH43_09135 PF05552 Conserved TM helix LPH43_09140 PF00391 PEP-utilising enzyme, mobile domain LPH43_09140 PF02896 PEP-utilising enzyme, TIM barrel domain LPH43_09140 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LPH43_09145 PF03618 Kinase/pyrophosphorylase LPH43_09165 PF04286 Protein of unknown function (DUF445) LPH43_09180 PF04359 Protein of unknown function (DUF493) LPH43_09185 PF03099 Biotin/lipoate A/B protein ligase family LPH43_09190 PF04055 Radical SAM superfamily LPH43_09190 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family LPH43_09220 PF03471 Transporter associated domain LPH43_09220 PF00571 CBS domain LPH43_09220 PF01595 Cyclin M transmembrane N-terminal domain LPH43_09235 PF01751 Toprim domain LPH43_09235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH43_09235 PF00986 DNA gyrase B subunit, carboxyl terminus LPH43_09235 PF00204 DNA gyrase B LPH43_09245 PF00117 Glutamine amidotransferase class-I LPH43_09245 PF06418 CTP synthase N-terminus LPH43_09250 PF00793 DAHP synthetase I family LPH43_09255 PF00113 Enolase, C-terminal TIM barrel domain LPH43_09255 PF03952 Enolase, N-terminal domain LPH43_09260 PF04977 Septum formation initiator LPH43_09265 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LPH43_09270 PF02542 YgbB family LPH43_09275 PF01713 Smr domain LPH43_09300 PF02470 MlaD protein LPH43_09300 PF03886 ABC-type transport auxiliary lipoprotein component LPH43_09305 PF00005 ABC transporter LPH43_09310 PF02405 Permease MlaE LPH43_09385 PF04093 rod shape-determining protein MreD LPH43_09390 PF03717 Penicillin-binding Protein dimerisation domain LPH43_09390 PF00905 Penicillin binding protein transpeptidase domain LPH43_09395 PF01098 Cell cycle protein LPH43_09400 PF02547 Queuosine biosynthesis protein LPH43_09405 PF02824 TGS domain LPH43_09405 PF04607 Region found in RelA / SpoT proteins LPH43_09405 PF13291 ACT domain LPH43_09420 PF03776 Septum formation topological specificity factor MinE LPH43_09425 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LPH43_09430 PF03775 Septum formation inhibitor MinC, C-terminal domain LPH43_09430 PF05209 Septum formation inhibitor MinC, N-terminal domain LPH43_09450 PF00730 HhH-GPD superfamily base excision DNA repair protein LPH43_09460 PF01292 Prokaryotic cytochrome b561 LPH43_09465 PF04264 YceI-like domain LPH43_09470 PF00072 Response regulator receiver domain LPH43_09470 PF09308 LuxQ, periplasmic LPH43_09470 PF00512 His Kinase A (phospho-acceptor) domain LPH43_09470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH43_09480 PF01208 Uroporphyrinogen decarboxylase (URO-D) LPH43_09485 PF01761 3-dehydroquinate synthase LPH43_09490 PF01202 Shikimate kinase LPH43_09495 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LPH43_09495 PF01243 Pyridoxamine 5'-phosphate oxidase LPH43_09505 PF00749 tRNA synthetases class I (E and Q), catalytic domain LPH43_09505 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain LPH43_09515 PF03932 CutC family LPH43_09535 PF00528 Binding-protein-dependent transport system inner membrane component LPH43_09540 PF00528 Binding-protein-dependent transport system inner membrane component LPH43_09545 PF12857 TOBE-like domain LPH43_09545 PF00005 ABC transporter LPH43_09585 PF01381 Helix-turn-helix LPH43_09665 PF10065 Uncharacterized conserved protein (DUF2303) LPH43_09690 PF04546 Sigma-70, non-essential region LPH43_09690 PF04545 Sigma-70, region 4 LPH43_09690 PF04539 Sigma-70 region 3 LPH43_09690 PF04542 Sigma-70 region 2 LPH43_09690 PF00140 Sigma-70 factor, region 1.2 LPH43_09690 PF03979 Sigma-70 factor, region 1.1 LPH43_09700 PF00521 DNA gyrase/topoisomerase IV, subunit A LPH43_09700 PF03989 DNA gyrase C-terminal domain, beta-propeller LPH43_09710 PF02321 Outer membrane efflux protein LPH43_09715 PF00529 HlyD membrane-fusion protein of T1SS LPH43_09715 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LPH43_09720 PF07690 Major Facilitator Superfamily LPH43_09725 PF12697 Alpha/beta hydrolase family LPH43_09730 PF00155 Aminotransferase class I and II LPH43_09740 PF01040 UbiA prenyltransferase family LPH43_09745 PF00753 Metallo-beta-lactamase superfamily LPH43_09750 PF12627 Probable RNA and SrmB- binding site of polymerase A LPH43_09750 PF01743 Poly A polymerase head domain LPH43_09750 PF01966 HD domain LPH43_09755 PF14718 Soluble lytic murein transglycosylase L domain LPH43_09755 PF01464 Transglycosylase SLT domain LPH43_09765 PF02666 Phosphatidylserine decarboxylase LPH43_09820 PF00456 Transketolase, thiamine diphosphate binding domain LPH43_09820 PF17831 Pyruvate dehydrogenase E1 component middle domain LPH43_09825 PF00698 Acyl transferase domain LPH43_09835 PF00550 Phosphopantetheine attachment site LPH43_09840 PF02801 Beta-ketoacyl synthase, C-terminal domain LPH43_09840 PF00109 Beta-ketoacyl synthase, N-terminal domain LPH43_09845 PF00425 chorismate binding enzyme LPH43_09845 PF04715 Anthranilate synthase component I, N terminal region LPH43_09850 PF02618 YceG-like family LPH43_09855 PF09115 DNA polymerase III, delta subunit, C terminal LPH43_09875 PF00459 Inositol monophosphatase family LPH43_09880 PF00588 SpoU rRNA Methylase family LPH43_09885 PF04055 Radical SAM superfamily LPH43_09890 PF09285 Elongation factor P, C-terminal LPH43_09890 PF08207 Elongation factor P (EF-P) KOW-like domain LPH43_09890 PF01132 Elongation factor P (EF-P) OB domain LPH43_09895 PF01979 Amidohydrolase family LPH43_09905 PF13419 Haloacid dehalogenase-like hydrolase LPH43_09920 PF00561 alpha/beta hydrolase fold LPH43_09925 PF08534 Redoxin LPH43_09955 PF00155 Aminotransferase class I and II LPH43_09960 PF00795 Carbon-nitrogen hydrolase LPH43_09970 PF00849 RNA pseudouridylate synthase LPH43_09970 PF01479 S4 domain LPH43_09975 PF04079 Segregation and condensation complex subunit ScpB LPH43_09980 PF02616 Segregation and condensation protein ScpA LPH43_10010 PF00528 Binding-protein-dependent transport system inner membrane component LPH43_10015 PF00528 Binding-protein-dependent transport system inner membrane component LPH43_10030 PF00795 Carbon-nitrogen hydrolase LPH43_10035 PF04371 Porphyromonas-type peptidyl-arginine deiminase LPH43_10045 PF00444 Ribosomal protein L36 LPH43_10050 PF02224 Cytidylate kinase LPH43_10055 PF00575 S1 RNA binding domain LPH43_10060 PF00216 Bacterial DNA-binding protein LPH43_10070 PF18073 Rubredoxin metal binding domain LPH43_10075 PF00953 Glycosyl transferase family 4 LPH43_10080 PF02719 Polysaccharide biosynthesis protein LPH43_10085 PF00483 Nucleotidyl transferase LPH43_10090 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LPH43_10090 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LPH43_10095 PF00571 CBS domain LPH43_10095 PF00478 IMP dehydrogenase / GMP reductase domain LPH43_10100 PF00117 Glutamine amidotransferase class-I LPH43_10100 PF00958 GMP synthase C terminal domain LPH43_10100 PF02540 NAD synthase LPH43_10150 PF09571 XcyI restriction endonuclease LPH43_10165 PF17755 UvrA DNA-binding domain LPH43_10165 PF17760 UvrA interaction domain LPH43_10165 PF00005 ABC transporter LPH43_10170 PF00829 Ribosomal prokaryotic L21 protein LPH43_10175 PF01016 Ribosomal L27 protein LPH43_10180 PF01926 50S ribosome-binding GTPase LPH43_10180 PF01018 GTP1/OBG LPH43_10185 PF01649 Ribosomal protein S20 LPH43_10190 PF03023 Lipid II flippase MurJ LPH43_10195 PF01687 Riboflavin kinase LPH43_10195 PF06574 FAD synthetase LPH43_10200 PF06827 Zinc finger found in FPG and IleRS LPH43_10200 PF08264 Anticodon-binding domain of tRNA LPH43_10200 PF00133 tRNA synthetases class I (I, L, M and V) LPH43_10205 PF01252 Signal peptidase (SPase) II LPH43_10210 PF02401 LytB protein LPH43_10280 PF13091 PLD-like domain LPH43_10280 PF13087 AAA domain LPH43_10285 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) LPH43_10285 PF06594 Haemolysin-type calcium binding protein related domain LPH43_10350 PF00664 ABC transporter transmembrane region LPH43_10350 PF00005 ABC transporter LPH43_10350 PF03412 Peptidase C39 family LPH43_10355 PF00155 Aminotransferase class I and II LPH43_10360 PF01522 Polysaccharide deacetylase LPH43_10365 PF00462 Glutaredoxin LPH43_10375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH43_10375 PF03466 LysR substrate binding domain LPH43_10385 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LPH43_10395 PF00857 Isochorismatase family LPH43_10405 PF00107 Zinc-binding dehydrogenase LPH43_10405 PF08240 Alcohol dehydrogenase GroES-like domain LPH43_10410 PF00107 Zinc-binding dehydrogenase LPH43_10410 PF08240 Alcohol dehydrogenase GroES-like domain LPH43_10430 PF00873 AcrB/AcrD/AcrF family LPH43_10435 PF00873 AcrB/AcrD/AcrF family LPH43_10440 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LPH43_10445 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term LPH43_10445 PF14489 QueF-like protein LPH43_10460 PF00330 Aconitase family (aconitate hydratase) LPH43_10465 PF00694 Aconitase C-terminal domain LPH43_10470 PF00180 Isocitrate/isopropylmalate dehydrogenase LPH43_10485 PF02397 Bacterial sugar transferase LPH43_10500 PF13439 Glycosyltransferase Family 4 LPH43_10500 PF00534 Glycosyl transferases group 1 LPH43_10510 PF01943 Polysaccharide biosynthesis protein LPH43_10525 PF00072 Response regulator receiver domain LPH43_10525 PF00486 Transcriptional regulatory protein, C terminal LPH43_10530 PF05958 tRNA (Uracil-5-)-methyltransferase LPH43_10535 PF01928 CYTH domain LPH43_10540 PF00933 Glycosyl hydrolase family 3 N terminal domain LPH43_10545 PF00156 Phosphoribosyl transferase domain LPH43_10550 PF01048 Phosphorylase superfamily LPH43_10555 PF00313 'Cold-shock' DNA-binding domain LPH43_10565 PF01668 SmpB protein LPH43_10575 PF03658 RnfH family Ubiquitin LPH43_10580 PF04355 SmpA / OmlA family LPH43_10585 PF01475 Ferric uptake regulator family LPH43_10590 PF02463 RecF/RecN/SMC N terminal domain LPH43_10595 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding LPH43_10595 PF01628 HrcA protein C terminal domain LPH43_10600 PF01025 GrpE LPH43_10605 PF00012 Hsp70 protein LPH43_10610 PF01556 DnaJ C terminal domain LPH43_10610 PF00684 DnaJ central domain LPH43_10610 PF00226 DnaJ domain LPH43_10620 PF00072 Response regulator receiver domain LPH43_10620 PF00486 Transcriptional regulatory protein, C terminal LPH43_10625 PF01219 Prokaryotic diacylglycerol kinase LPH43_10630 PF01790 Prolipoprotein diacylglyceryl transferase LPH43_10635 PF00303 Thymidylate synthase LPH43_10640 PF00186 Dihydrofolate reductase LPH43_10645 PF13700 Domain of unknown function (DUF4158) LPH43_10645 PF01526 Tn3 transposase DDE domain LPH43_10655 PF00072 Response regulator receiver domain LPH43_10655 PF00486 Transcriptional regulatory protein, C terminal LPH43_10660 PF13493 Domain of unknown function (DUF4118) LPH43_10660 PF13492 GAF domain LPH43_10660 PF00512 His Kinase A (phospho-acceptor) domain LPH43_10660 PF02702 Osmosensitive K+ channel His kinase sensor domain LPH43_10660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH43_10665 PF02669 K+-transporting ATPase, c chain LPH43_10675 PF03814 Potassium-transporting ATPase A subunit LPH43_10690 PF00149 Calcineurin-like phosphoesterase LPH43_10695 PF04379 ApaG domain LPH43_10700 PF00398 Ribosomal RNA adenine dimethylase LPH43_10705 PF00929 Exonuclease LPH43_10710 PF01895 PhoU domain LPH43_10715 PF00005 ABC transporter LPH43_10720 PF00528 Binding-protein-dependent transport system inner membrane component LPH43_10725 PF00528 Binding-protein-dependent transport system inner membrane component LPH43_10730 PF12849 PBP superfamily domain LPH43_10735 PF02254 TrkA-N domain LPH43_10735 PF00999 Sodium/hydrogen exchanger family LPH43_10740 PF07715 TonB-dependent Receptor Plug Domain LPH43_10740 PF00593 TonB dependent receptor LPH43_10745 PF01323 DSBA-like thioredoxin domain LPH43_10755 PF00005 ABC transporter LPH43_10755 PF12848 ABC transporter LPH43_10770 PF01066 CDP-alcohol phosphatidyltransferase LPH43_10775 PF08459 UvrC Helix-hairpin-helix N-terminal LPH43_10775 PF02151 UvrB/uvrC motif LPH43_10775 PF01541 GIY-YIG catalytic domain LPH43_10780 PF01451 Low molecular weight phosphotyrosine protein phosphatase LPH43_10785 PF02348 Cytidylyltransferase LPH43_10790 PF10609 NUBPL iron-transfer P-loop NTPase LPH43_10795 PF00202 Aminotransferase class-III LPH43_10805 PF00490 Delta-aminolevulinic acid dehydratase LPH43_10815 PF12146 Serine aminopeptidase, S33 LPH43_10830 PF01134 Glucose inhibited division protein A LPH43_10830 PF13932 GidA associated domain LPH43_10850 PF13649 Methyltransferase domain LPH43_10870 PF02649 Type I GTP cyclohydrolase folE2 LPH43_10875 PF00132 Bacterial transferase hexapeptide (six repeats) LPH43_10880 PF00873 AcrB/AcrD/AcrF family LPH43_10885 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LPH43_10885 PF00529 HlyD membrane-fusion protein of T1SS LPH43_10890 PF05088 Bacterial NAD-glutamate dehydrogenase LPH43_10895 PF01513 ATP-NAD kinase LPH43_10915 PF12706 Beta-lactamase superfamily domain LPH43_10925 PF00929 Exonuclease LPH43_10925 PF08411 Exonuclease C-terminal LPH43_10940 PF00999 Sodium/hydrogen exchanger family LPH43_10950 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LPH43_10960 PF01812 5-formyltetrahydrofolate cyclo-ligase family LPH43_10980 PF03695 Uncharacterised protein family (UPF0149) LPH43_10985 PF00557 Metallopeptidase family M24 LPH43_10985 PF05195 Aminopeptidase P, N-terminal domain LPH43_10990 PF00293 NUDIX domain LPH43_11025 PF01063 Amino-transferase class IV LPH43_11040 PF02954 Bacterial regulatory protein, Fis family LPH43_11050 PF01381 Helix-turn-helix LPH43_11065 PF00535 Glycosyl transferase family 2 LPH43_11075 PF00925 GTP cyclohydrolase II LPH43_11085 PF08534 Redoxin LPH43_11110 PF00959 Phage lysozyme LPH43_11130 PF01367 5'-3' exonuclease, C-terminal SAM fold LPH43_11130 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LPH43_11130 PF00476 DNA polymerase family A LPH43_11130 PF01612 3'-5' exonuclease LPH43_11155 PF07963 Prokaryotic N-terminal methylation motif LPH43_11155 PF00114 Pilin (bacterial filament) LPH43_11170 PF16123 Hydroxyacylglutathione hydrolase C-terminus LPH43_11170 PF00753 Metallo-beta-lactamase superfamily LPH43_11180 PF00075 RNase H LPH43_11185 PF00929 Exonuclease LPH43_11205 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LPH43_11215 PF13632 Glycosyl transferase family group 2 LPH43_11220 PF02230 Phospholipase/Carboxylesterase LPH43_11225 PF07694 5TMR of 5TMR-LYT LPH43_11225 PF06580 Histidine kinase LPH43_11230 PF04397 LytTr DNA-binding domain LPH43_11230 PF00072 Response regulator receiver domain LPH43_11235 PF03900 Porphobilinogen deaminase, C-terminal domain LPH43_11235 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LPH43_11255 PF00437 Type II/IV secretion system protein LPH43_11260 PF00437 Type II/IV secretion system protein LPH43_11275 PF00535 Glycosyl transferase family 2 LPH43_11285 PF02801 Beta-ketoacyl synthase, C-terminal domain LPH43_11285 PF00109 Beta-ketoacyl synthase, N-terminal domain LPH43_11300 PF09924 Uncharacterised conserved protein (DUF2156) LPH43_11300 PF03706 Lysylphosphatidylglycerol synthase TM region LPH43_11305 PF01042 Endoribonuclease L-PSP LPH43_11320 PF01430 Hsp33 protein LPH43_11325 PF00912 Transglycosylase LPH43_11330 PF05190 MutS family domain IV LPH43_11330 PF01624 MutS domain I LPH43_11330 PF05188 MutS domain II LPH43_11330 PF05192 MutS domain III LPH43_11330 PF00488 MutS domain V LPH43_11335 PF01168 Alanine racemase, N-terminal domain LPH43_11350 PF08279 HTH domain LPH43_11350 PF02237 Biotin protein ligase C terminal domain LPH43_11350 PF03099 Biotin/lipoate A/B protein ligase family LPH43_11355 PF03309 Type III pantothenate kinase LPH43_11385 PF01183 Glycosyl hydrolases family 25 LPH43_11405 PF01381 Helix-turn-helix LPH43_11415 PF07963 Prokaryotic N-terminal methylation motif LPH43_11415 PF00114 Pilin (bacterial filament) LPH43_11515 PF00589 Phage integrase family LPH43_11530 PF00959 Phage lysozyme LPH43_11545 PF00574 Clp protease LPH43_11585 PF01022 Bacterial regulatory protein, arsR family LPH43_11600 PF00873 AcrB/AcrD/AcrF family LPH43_11625 PF00581 Rhodanese-like domain LPH43_11630 PF02556 Preprotein translocase subunit SecB LPH43_11635 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LPH43_11635 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LPH43_11660 PF12169 DNA polymerase III subunits gamma and tau domain III LPH43_11660 PF12170 DNA polymerase III tau subunit V interacting with alpha LPH43_11665 PF02575 YbaB/EbfC DNA-binding family LPH43_11670 PF13662 Toprim domain LPH43_11670 PF02132 RecR protein LPH43_11675 PF01230 HIT domain LPH43_11685 PF11992 Domain of unknown function (DUF3488) LPH43_11685 PF13559 Domain of unknown function (DUF4129) LPH43_11685 PF01841 Transglutaminase-like superfamily LPH43_11695 PF07726 ATPase family associated with various cellular activities (AAA) LPH43_11695 PF17863 AAA lid domain LPH43_11705 PF02620 Large ribosomal RNA subunit accumulation protein YceD LPH43_11710 PF01783 Ribosomal L32p protein family LPH43_11715 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LPH43_11715 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LPH43_11730 PF01341 Glycosyl hydrolases family 6 LPH43_11730 PF00553 Cellulose binding domain LPH43_11730 PF00041 Fibronectin type III domain LPH43_11735 PF00682 HMGL-like LPH43_11735 PF08502 LeuA allosteric (dimerisation) domain LPH43_11740 PF00291 Pyridoxal-phosphate dependent enzyme LPH43_11750 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LPH43_11750 PF00205 Thiamine pyrophosphate enzyme, central domain LPH43_11750 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LPH43_11755 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LPH43_11755 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LPH43_11760 PF17804 Tail specific protease N-terminal domain LPH43_11760 PF03572 Peptidase family S41 LPH43_11760 PF11818 C-terminal domain of tail specific protease (DUF3340) LPH43_11760 PF00595 PDZ domain LPH43_11765 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family LPH43_11770 PF02566 OsmC-like protein LPH43_11775 PF03969 AFG1-like ATPase LPH43_11780 PF02129 X-Pro dipeptidyl-peptidase (S15 family) LPH43_11785 PF02492 CobW/HypB/UreG, nucleotide-binding domain LPH43_11785 PF07683 Cobalamin synthesis protein cobW C-terminal domain LPH43_11795 PF00551 Formyl transferase LPH43_11805 PF03109 ABC1 family LPH43_11815 PF12241 Trans-2-enoyl-CoA reductase catalytic region LPH43_11815 PF07055 Enoyl reductase FAD binding domain LPH43_11815 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase LPH43_11835 PF00881 Nitroreductase family LPH43_11840 PF04264 YceI-like domain LPH43_11845 PF02673 Bacitracin resistance protein BacA LPH43_11850 PF00120 Glutamine synthetase, catalytic domain LPH43_11850 PF03951 Glutamine synthetase, beta-Grasp domain LPH43_11855 PF00543 Nitrogen regulatory protein P-II LPH43_11860 PF00909 Ammonium Transporter Family LPH43_11875 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LPH43_11875 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LPH43_11880 PF02910 Fumarate reductase flavoprotein C-term LPH43_11880 PF00890 FAD binding domain LPH43_11885 PF02445 Quinolinate synthetase A protein LPH43_11890 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LPH43_11890 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LPH43_11895 PF01026 TatD related DNase