locus-tag class description LPH41_00010 PF01850 PIN domain LPH41_00095 PF01026 TatD related DNase LPH41_00100 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LPH41_00100 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LPH41_00105 PF02445 Quinolinate synthetase A protein LPH41_00110 PF00890 FAD binding domain LPH41_00110 PF02910 Fumarate reductase flavoprotein C-term LPH41_00115 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LPH41_00115 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LPH41_00130 PF00909 Ammonium Transporter Family LPH41_00135 PF00543 Nitrogen regulatory protein P-II LPH41_00140 PF03951 Glutamine synthetase, beta-Grasp domain LPH41_00140 PF00120 Glutamine synthetase, catalytic domain LPH41_00145 PF02673 Bacitracin resistance protein BacA LPH41_00150 PF04264 YceI-like domain LPH41_00155 PF00881 Nitroreductase family LPH41_00175 PF07055 Enoyl reductase FAD binding domain LPH41_00175 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase LPH41_00175 PF12241 Trans-2-enoyl-CoA reductase catalytic region LPH41_00185 PF03109 ABC1 family LPH41_00195 PF00551 Formyl transferase LPH41_00205 PF02492 CobW/HypB/UreG, nucleotide-binding domain LPH41_00205 PF07683 Cobalamin synthesis protein cobW C-terminal domain LPH41_00210 PF02129 X-Pro dipeptidyl-peptidase (S15 family) LPH41_00215 PF03969 AFG1-like ATPase LPH41_00220 PF02566 OsmC-like protein LPH41_00225 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family LPH41_00230 PF11818 C-terminal domain of tail specific protease (DUF3340) LPH41_00230 PF00595 PDZ domain LPH41_00230 PF03572 Peptidase family S41 LPH41_00230 PF17804 Tail specific protease N-terminal domain LPH41_00235 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LPH41_00235 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LPH41_00240 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LPH41_00240 PF00205 Thiamine pyrophosphate enzyme, central domain LPH41_00240 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LPH41_00250 PF00291 Pyridoxal-phosphate dependent enzyme LPH41_00255 PF00682 HMGL-like LPH41_00255 PF08502 LeuA allosteric (dimerisation) domain LPH41_00260 PF00553 Cellulose binding domain LPH41_00260 PF00041 Fibronectin type III domain LPH41_00260 PF01341 Glycosyl hydrolases family 6 LPH41_00275 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LPH41_00275 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LPH41_00280 PF01783 Ribosomal L32p protein family LPH41_00285 PF02620 Large ribosomal RNA subunit accumulation protein YceD LPH41_00295 PF07726 ATPase family associated with various cellular activities (AAA) LPH41_00295 PF17863 AAA lid domain LPH41_00305 PF01841 Transglutaminase-like superfamily LPH41_00305 PF13559 Domain of unknown function (DUF4129) LPH41_00305 PF11992 Domain of unknown function (DUF3488) LPH41_00315 PF01230 HIT domain LPH41_00320 PF02132 RecR protein LPH41_00320 PF13662 Toprim domain LPH41_00325 PF02575 YbaB/EbfC DNA-binding family LPH41_00330 PF12169 DNA polymerase III subunits gamma and tau domain III LPH41_00330 PF12170 DNA polymerase III tau subunit V interacting with alpha LPH41_00360 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LPH41_00360 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LPH41_00365 PF02556 Preprotein translocase subunit SecB LPH41_00370 PF00581 Rhodanese-like domain LPH41_00395 PF00873 AcrB/AcrD/AcrF family LPH41_00410 PF01022 Bacterial regulatory protein, arsR family LPH41_00450 PF00574 Clp protease LPH41_00465 PF00959 Phage lysozyme LPH41_00480 PF00589 Phage integrase family LPH41_00580 PF07963 Prokaryotic N-terminal methylation motif LPH41_00580 PF00114 Pilin (bacterial filament) LPH41_00590 PF01381 Helix-turn-helix LPH41_00610 PF01183 Glycosyl hydrolases family 25 LPH41_00640 PF03309 Type III pantothenate kinase LPH41_00645 PF08279 HTH domain LPH41_00645 PF02237 Biotin protein ligase C terminal domain LPH41_00645 PF03099 Biotin/lipoate A/B protein ligase family LPH41_00660 PF01168 Alanine racemase, N-terminal domain LPH41_00665 PF00488 MutS domain V LPH41_00665 PF05190 MutS family domain IV LPH41_00665 PF05188 MutS domain II LPH41_00665 PF01624 MutS domain I LPH41_00665 PF05192 MutS domain III LPH41_00670 PF00912 Transglycosylase LPH41_00675 PF01430 Hsp33 protein LPH41_00690 PF01042 Endoribonuclease L-PSP LPH41_00695 PF03706 Lysylphosphatidylglycerol synthase TM region LPH41_00695 PF09924 Uncharacterised conserved protein (DUF2156) LPH41_00710 PF02801 Beta-ketoacyl synthase, C-terminal domain LPH41_00710 PF00109 Beta-ketoacyl synthase, N-terminal domain LPH41_00720 PF00535 Glycosyl transferase family 2 LPH41_00735 PF00437 Type II/IV secretion system protein LPH41_00740 PF00437 Type II/IV secretion system protein LPH41_00755 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LPH41_00755 PF03900 Porphobilinogen deaminase, C-terminal domain LPH41_00760 PF04397 LytTr DNA-binding domain LPH41_00760 PF00072 Response regulator receiver domain LPH41_00765 PF07694 5TMR of 5TMR-LYT LPH41_00765 PF06580 Histidine kinase LPH41_00770 PF02230 Phospholipase/Carboxylesterase LPH41_00775 PF13632 Glycosyl transferase family group 2 LPH41_00785 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LPH41_00805 PF00929 Exonuclease LPH41_00810 PF00075 RNase H LPH41_00820 PF00753 Metallo-beta-lactamase superfamily LPH41_00820 PF16123 Hydroxyacylglutathione hydrolase C-terminus LPH41_00835 PF00114 Pilin (bacterial filament) LPH41_00835 PF07963 Prokaryotic N-terminal methylation motif LPH41_00860 PF01612 3'-5' exonuclease LPH41_00860 PF00476 DNA polymerase family A LPH41_00860 PF01367 5'-3' exonuclease, C-terminal SAM fold LPH41_00860 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LPH41_00880 PF00959 Phage lysozyme LPH41_00910 PF08534 Redoxin LPH41_00920 PF00925 GTP cyclohydrolase II LPH41_00930 PF00535 Glycosyl transferase family 2 LPH41_00945 PF01381 Helix-turn-helix LPH41_00955 PF02954 Bacterial regulatory protein, Fis family LPH41_00970 PF01063 Amino-transferase class IV LPH41_01005 PF00293 NUDIX domain LPH41_01010 PF00557 Metallopeptidase family M24 LPH41_01010 PF05195 Aminopeptidase P, N-terminal domain LPH41_01015 PF03695 Uncharacterised protein family (UPF0149) LPH41_01035 PF01812 5-formyltetrahydrofolate cyclo-ligase family LPH41_01045 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LPH41_01055 PF00999 Sodium/hydrogen exchanger family LPH41_01070 PF08411 Exonuclease C-terminal LPH41_01070 PF00929 Exonuclease LPH41_01080 PF12706 Beta-lactamase superfamily domain LPH41_01100 PF01513 ATP-NAD kinase LPH41_01105 PF05088 Bacterial NAD-glutamate dehydrogenase LPH41_01110 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LPH41_01110 PF00529 HlyD membrane-fusion protein of T1SS LPH41_01115 PF00873 AcrB/AcrD/AcrF family LPH41_01120 PF00132 Bacterial transferase hexapeptide (six repeats) LPH41_01125 PF02649 Type I GTP cyclohydrolase folE2 LPH41_01145 PF13649 Methyltransferase domain LPH41_01165 PF01134 Glucose inhibited division protein A LPH41_01165 PF13932 GidA associated domain LPH41_01180 PF12146 Serine aminopeptidase, S33 LPH41_01190 PF00490 Delta-aminolevulinic acid dehydratase LPH41_01200 PF00202 Aminotransferase class-III LPH41_01205 PF10609 NUBPL iron-transfer P-loop NTPase LPH41_01210 PF02348 Cytidylyltransferase LPH41_01215 PF01451 Low molecular weight phosphotyrosine protein phosphatase LPH41_01220 PF02151 UvrB/uvrC motif LPH41_01220 PF08459 UvrC Helix-hairpin-helix N-terminal LPH41_01220 PF01541 GIY-YIG catalytic domain LPH41_01225 PF01066 CDP-alcohol phosphatidyltransferase LPH41_01240 PF12848 ABC transporter LPH41_01240 PF00005 ABC transporter LPH41_01245 PF00593 TonB dependent receptor LPH41_01245 PF07715 TonB-dependent Receptor Plug Domain LPH41_01260 PF01323 DSBA-like thioredoxin domain LPH41_01265 PF07715 TonB-dependent Receptor Plug Domain LPH41_01265 PF00593 TonB dependent receptor LPH41_01270 PF02254 TrkA-N domain LPH41_01270 PF00999 Sodium/hydrogen exchanger family LPH41_01275 PF12849 PBP superfamily domain LPH41_01280 PF00528 Binding-protein-dependent transport system inner membrane component LPH41_01285 PF00528 Binding-protein-dependent transport system inner membrane component LPH41_01290 PF00005 ABC transporter LPH41_01295 PF01895 PhoU domain LPH41_01300 PF00929 Exonuclease LPH41_01305 PF00398 Ribosomal RNA adenine dimethylase LPH41_01310 PF04379 ApaG domain LPH41_01315 PF00149 Calcineurin-like phosphoesterase LPH41_01330 PF03814 Potassium-transporting ATPase A subunit LPH41_01340 PF02669 K+-transporting ATPase, c chain LPH41_01345 PF02702 Osmosensitive K+ channel His kinase sensor domain LPH41_01345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH41_01345 PF13492 GAF domain LPH41_01345 PF13493 Domain of unknown function (DUF4118) LPH41_01345 PF00512 His Kinase A (phospho-acceptor) domain LPH41_01350 PF00072 Response regulator receiver domain LPH41_01350 PF00486 Transcriptional regulatory protein, C terminal LPH41_01360 PF13700 Domain of unknown function (DUF4158) LPH41_01360 PF01526 Tn3 transposase DDE domain LPH41_01365 PF00186 Dihydrofolate reductase LPH41_01370 PF00303 Thymidylate synthase LPH41_01375 PF01790 Prolipoprotein diacylglyceryl transferase LPH41_01380 PF01219 Prokaryotic diacylglycerol kinase LPH41_01385 PF00486 Transcriptional regulatory protein, C terminal LPH41_01385 PF00072 Response regulator receiver domain LPH41_01395 PF01556 DnaJ C terminal domain LPH41_01395 PF00226 DnaJ domain LPH41_01395 PF00684 DnaJ central domain LPH41_01400 PF00012 Hsp70 protein LPH41_01405 PF01025 GrpE LPH41_01410 PF01628 HrcA protein C terminal domain LPH41_01410 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding LPH41_01415 PF02463 RecF/RecN/SMC N terminal domain LPH41_01420 PF01475 Ferric uptake regulator family LPH41_01425 PF04355 SmpA / OmlA family LPH41_01430 PF03658 RnfH family Ubiquitin LPH41_01440 PF01668 SmpB protein LPH41_01450 PF00313 'Cold-shock' DNA-binding domain LPH41_01455 PF01048 Phosphorylase superfamily LPH41_01460 PF00156 Phosphoribosyl transferase domain LPH41_01465 PF00933 Glycosyl hydrolase family 3 N terminal domain LPH41_01470 PF01928 CYTH domain LPH41_01475 PF05958 tRNA (Uracil-5-)-methyltransferase LPH41_01480 PF00072 Response regulator receiver domain LPH41_01480 PF00486 Transcriptional regulatory protein, C terminal LPH41_01495 PF01943 Polysaccharide biosynthesis protein LPH41_01505 PF13439 Glycosyltransferase Family 4 LPH41_01505 PF00534 Glycosyl transferases group 1 LPH41_01520 PF02397 Bacterial sugar transferase LPH41_01535 PF00180 Isocitrate/isopropylmalate dehydrogenase LPH41_01540 PF00694 Aconitase C-terminal domain LPH41_01545 PF00330 Aconitase family (aconitate hydratase) LPH41_01565 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term LPH41_01565 PF14489 QueF-like protein LPH41_01570 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LPH41_01575 PF00873 AcrB/AcrD/AcrF family LPH41_01580 PF00873 AcrB/AcrD/AcrF family LPH41_01600 PF00107 Zinc-binding dehydrogenase LPH41_01600 PF08240 Alcohol dehydrogenase GroES-like domain LPH41_01605 PF08240 Alcohol dehydrogenase GroES-like domain LPH41_01605 PF00107 Zinc-binding dehydrogenase LPH41_01615 PF00857 Isochorismatase family LPH41_01625 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LPH41_01635 PF03466 LysR substrate binding domain LPH41_01635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH41_01645 PF00462 Glutaredoxin LPH41_01650 PF01522 Polysaccharide deacetylase LPH41_01655 PF00155 Aminotransferase class I and II LPH41_01660 PF00664 ABC transporter transmembrane region LPH41_01660 PF03412 Peptidase C39 family LPH41_01660 PF00005 ABC transporter LPH41_01725 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) LPH41_01725 PF06594 Haemolysin-type calcium binding protein related domain LPH41_01730 PF13091 PLD-like domain LPH41_01730 PF13087 AAA domain LPH41_01805 PF02401 LytB protein LPH41_01810 PF01252 Signal peptidase (SPase) II LPH41_01815 PF00133 tRNA synthetases class I (I, L, M and V) LPH41_01815 PF06827 Zinc finger found in FPG and IleRS LPH41_01815 PF08264 Anticodon-binding domain of tRNA LPH41_01820 PF01687 Riboflavin kinase LPH41_01820 PF06574 FAD synthetase LPH41_01825 PF03023 Lipid II flippase MurJ LPH41_01830 PF01649 Ribosomal protein S20 LPH41_01835 PF01018 GTP1/OBG LPH41_01835 PF01926 50S ribosome-binding GTPase LPH41_01840 PF01016 Ribosomal L27 protein LPH41_01845 PF00829 Ribosomal prokaryotic L21 protein LPH41_01850 PF00005 ABC transporter LPH41_01850 PF17755 UvrA DNA-binding domain LPH41_01850 PF17760 UvrA interaction domain LPH41_01865 PF09571 XcyI restriction endonuclease LPH41_01915 PF00117 Glutamine amidotransferase class-I LPH41_01915 PF02540 NAD synthase LPH41_01915 PF00958 GMP synthase C terminal domain LPH41_01920 PF00571 CBS domain LPH41_01920 PF00478 IMP dehydrogenase / GMP reductase domain LPH41_01925 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LPH41_01925 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LPH41_01930 PF00483 Nucleotidyl transferase LPH41_01935 PF02719 Polysaccharide biosynthesis protein LPH41_01940 PF00953 Glycosyl transferase family 4 LPH41_01945 PF18073 Rubredoxin metal binding domain LPH41_01955 PF00216 Bacterial DNA-binding protein LPH41_01960 PF00575 S1 RNA binding domain LPH41_01965 PF02224 Cytidylate kinase LPH41_01970 PF00444 Ribosomal protein L36 LPH41_01980 PF04371 Porphyromonas-type peptidyl-arginine deiminase LPH41_01985 PF00795 Carbon-nitrogen hydrolase LPH41_02000 PF00528 Binding-protein-dependent transport system inner membrane component LPH41_02005 PF00528 Binding-protein-dependent transport system inner membrane component LPH41_02035 PF02616 Segregation and condensation protein ScpA LPH41_02040 PF04079 Segregation and condensation complex subunit ScpB LPH41_02045 PF01479 S4 domain LPH41_02045 PF00849 RNA pseudouridylate synthase LPH41_02055 PF00795 Carbon-nitrogen hydrolase LPH41_02060 PF00155 Aminotransferase class I and II LPH41_02090 PF08534 Redoxin LPH41_02095 PF00561 alpha/beta hydrolase fold LPH41_02105 PF13419 Haloacid dehalogenase-like hydrolase LPH41_02115 PF01979 Amidohydrolase family LPH41_02120 PF09285 Elongation factor P, C-terminal LPH41_02120 PF08207 Elongation factor P (EF-P) KOW-like domain LPH41_02120 PF01132 Elongation factor P (EF-P) OB domain LPH41_02125 PF04055 Radical SAM superfamily LPH41_02130 PF00588 SpoU rRNA Methylase family LPH41_02135 PF00459 Inositol monophosphatase family LPH41_02155 PF09115 DNA polymerase III, delta subunit, C terminal LPH41_02160 PF02618 YceG-like family LPH41_02165 PF04715 Anthranilate synthase component I, N terminal region LPH41_02165 PF00425 chorismate binding enzyme LPH41_02170 PF00109 Beta-ketoacyl synthase, N-terminal domain LPH41_02170 PF02801 Beta-ketoacyl synthase, C-terminal domain LPH41_02175 PF00550 Phosphopantetheine attachment site LPH41_02185 PF00698 Acyl transferase domain LPH41_02190 PF17831 Pyruvate dehydrogenase E1 component middle domain LPH41_02190 PF00456 Transketolase, thiamine diphosphate binding domain LPH41_02245 PF02666 Phosphatidylserine decarboxylase LPH41_02255 PF01464 Transglycosylase SLT domain LPH41_02255 PF14718 Soluble lytic murein transglycosylase L domain LPH41_02260 PF01966 HD domain LPH41_02260 PF12627 Probable RNA and SrmB- binding site of polymerase A LPH41_02260 PF01743 Poly A polymerase head domain LPH41_02265 PF00753 Metallo-beta-lactamase superfamily LPH41_02270 PF01040 UbiA prenyltransferase family LPH41_02280 PF00155 Aminotransferase class I and II LPH41_02285 PF12697 Alpha/beta hydrolase family LPH41_02290 PF07690 Major Facilitator Superfamily LPH41_02295 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LPH41_02295 PF00529 HlyD membrane-fusion protein of T1SS LPH41_02300 PF02321 Outer membrane efflux protein LPH41_02310 PF00521 DNA gyrase/topoisomerase IV, subunit A LPH41_02310 PF03989 DNA gyrase C-terminal domain, beta-propeller LPH41_02320 PF04545 Sigma-70, region 4 LPH41_02320 PF04539 Sigma-70 region 3 LPH41_02320 PF04542 Sigma-70 region 2 LPH41_02320 PF03979 Sigma-70 factor, region 1.1 LPH41_02320 PF04546 Sigma-70, non-essential region LPH41_02320 PF00140 Sigma-70 factor, region 1.2 LPH41_02345 PF10065 Uncharacterized conserved protein (DUF2303) LPH41_02420 PF01381 Helix-turn-helix LPH41_02460 PF12857 TOBE-like domain LPH41_02460 PF00005 ABC transporter LPH41_02465 PF00528 Binding-protein-dependent transport system inner membrane component LPH41_02470 PF00528 Binding-protein-dependent transport system inner membrane component LPH41_02490 PF03932 CutC family LPH41_02500 PF00749 tRNA synthetases class I (E and Q), catalytic domain LPH41_02500 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain LPH41_02510 PF01243 Pyridoxamine 5'-phosphate oxidase LPH41_02510 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LPH41_02515 PF01202 Shikimate kinase LPH41_02520 PF01761 3-dehydroquinate synthase LPH41_02525 PF01208 Uroporphyrinogen decarboxylase (URO-D) LPH41_02535 PF00072 Response regulator receiver domain LPH41_02535 PF00512 His Kinase A (phospho-acceptor) domain LPH41_02535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH41_02535 PF09308 LuxQ, periplasmic LPH41_02540 PF04264 YceI-like domain LPH41_02545 PF01292 Prokaryotic cytochrome b561 LPH41_02555 PF00730 HhH-GPD superfamily base excision DNA repair protein LPH41_02575 PF05209 Septum formation inhibitor MinC, N-terminal domain LPH41_02575 PF03775 Septum formation inhibitor MinC, C-terminal domain LPH41_02580 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LPH41_02585 PF03776 Septum formation topological specificity factor MinE LPH41_02600 PF02824 TGS domain LPH41_02600 PF04607 Region found in RelA / SpoT proteins LPH41_02600 PF13291 ACT domain LPH41_02605 PF02547 Queuosine biosynthesis protein LPH41_02610 PF01098 Cell cycle protein LPH41_02615 PF00905 Penicillin binding protein transpeptidase domain LPH41_02615 PF03717 Penicillin-binding Protein dimerisation domain LPH41_02620 PF04093 rod shape-determining protein MreD LPH41_02695 PF02405 Permease MlaE LPH41_02700 PF00005 ABC transporter LPH41_02705 PF02470 MlaD protein LPH41_02705 PF03886 ABC-type transport auxiliary lipoprotein component LPH41_02730 PF01713 Smr domain LPH41_02735 PF02542 YgbB family LPH41_02740 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LPH41_02745 PF04977 Septum formation initiator LPH41_02750 PF00113 Enolase, C-terminal TIM barrel domain LPH41_02750 PF03952 Enolase, N-terminal domain LPH41_02755 PF00793 DAHP synthetase I family LPH41_02760 PF06418 CTP synthase N-terminus LPH41_02760 PF00117 Glutamine amidotransferase class-I LPH41_02770 PF00204 DNA gyrase B LPH41_02770 PF00986 DNA gyrase B subunit, carboxyl terminus LPH41_02770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH41_02770 PF01751 Toprim domain LPH41_02785 PF00571 CBS domain LPH41_02785 PF01595 Cyclin M transmembrane N-terminal domain LPH41_02785 PF03471 Transporter associated domain LPH41_02815 PF04055 Radical SAM superfamily LPH41_02815 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family LPH41_02820 PF03099 Biotin/lipoate A/B protein ligase family LPH41_02825 PF04359 Protein of unknown function (DUF493) LPH41_02840 PF04286 Protein of unknown function (DUF445) LPH41_02860 PF03618 Kinase/pyrophosphorylase LPH41_02865 PF00391 PEP-utilising enzyme, mobile domain LPH41_02865 PF02896 PEP-utilising enzyme, TIM barrel domain LPH41_02865 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LPH41_02870 PF05552 Conserved TM helix LPH41_02870 PF00924 Mechanosensitive ion channel LPH41_02875 PF00929 Exonuclease LPH41_02880 PF16485 Protealysin propeptide LPH41_02880 PF01447 Thermolysin metallopeptidase, catalytic domain LPH41_02880 PF02868 Thermolysin metallopeptidase, alpha-helical domain LPH41_02895 PF12852 Cupin LPH41_02895 PF12833 Helix-turn-helix domain LPH41_02900 PF07859 alpha/beta hydrolase fold LPH41_02905 PF03824 High-affinity nickel-transport protein LPH41_02910 PF02583 Metal-sensitive transcriptional repressor LPH41_02915 PF00207 Alpha-2-macroglobulin family LPH41_02915 PF07703 Alpha-2-macroglobulin bait region domain LPH41_02915 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain LPH41_02915 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain LPH41_02915 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain LPH41_02915 PF17962 Bacterial macroglobulin domain 6 LPH41_02915 PF11974 Bacterial alpha-2-macroglobulin MG3 domain LPH41_02915 PF01835 MG2 domain LPH41_02935 PF04303 PrpF protein LPH41_02940 PF00694 Aconitase C-terminal domain LPH41_02940 PF00330 Aconitase family (aconitate hydratase) LPH41_02945 PF00285 Citrate synthase, C-terminal domain LPH41_02960 PF04357 TamB, inner membrane protein subunit of TAM complex LPH41_02965 PF17243 POTRA domain TamA domain 1 LPH41_02965 PF01103 Surface antigen LPH41_02970 PF13185 GAF domain LPH41_02980 PF08482 ATP-dependent helicase C-terminal LPH41_02980 PF00271 Helicase conserved C-terminal domain LPH41_02980 PF04408 Helicase associated domain (HA2) LPH41_02980 PF00270 DEAD/DEAH box helicase LPH41_02995 PF05567 Neisseria PilC beta-propeller domain LPH41_03000 PF00005 ABC transporter LPH41_03005 PF01061 ABC-2 type transporter LPH41_03010 PF00664 ABC transporter transmembrane region LPH41_03010 PF03412 Peptidase C39 family LPH41_03010 PF00005 ABC transporter LPH41_03035 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LPH41_03035 PF00529 HlyD membrane-fusion protein of T1SS LPH41_03050 PF03144 Elongation factor Tu domain 2 LPH41_03050 PF00009 Elongation factor Tu GTP binding domain LPH41_03050 PF00679 Elongation factor G C-terminus LPH41_03055 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LPH41_03060 PF00056 lactate/malate dehydrogenase, NAD binding domain LPH41_03060 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LPH41_03065 PF02798 Glutathione S-transferase, N-terminal domain LPH41_03065 PF00043 Glutathione S-transferase, C-terminal domain LPH41_03085 PF01555 DNA methylase LPH41_03105 PF00959 Phage lysozyme LPH41_03125 PF00476 DNA polymerase family A LPH41_03125 PF01612 3'-5' exonuclease LPH41_03125 PF01367 5'-3' exonuclease, C-terminal SAM fold LPH41_03125 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LPH41_03145 PF07963 Prokaryotic N-terminal methylation motif LPH41_03145 PF00114 Pilin (bacterial filament) LPH41_03160 PF13396 Phospholipase_D-nuclease N-terminal LPH41_03160 PF13091 PLD-like domain LPH41_03165 PF00471 Ribosomal protein L33 LPH41_03170 PF00830 Ribosomal L28 family LPH41_03180 PF13419 Haloacid dehalogenase-like hydrolase LPH41_03185 PF01479 S4 domain LPH41_03185 PF00849 RNA pseudouridylate synthase LPH41_03215 PF00268 Ribonucleotide reductase, small chain LPH41_03220 PF02867 Ribonucleotide reductase, barrel domain LPH41_03220 PF03477 ATP cone domain LPH41_03220 PF00317 Ribonucleotide reductase, all-alpha domain LPH41_03245 PF00216 Bacterial DNA-binding protein LPH41_03250 PF05362 Lon protease (S16) C-terminal proteolytic domain LPH41_03250 PF02190 ATP-dependent protease La (LON) substrate-binding domain LPH41_03250 PF00004 ATPase family associated with various cellular activities (AAA) LPH41_03255 PF06689 ClpX C4-type zinc finger LPH41_03255 PF10431 C-terminal, D2-small domain, of ClpB protein LPH41_03255 PF07724 AAA domain (Cdc48 subfamily) LPH41_03260 PF00574 Clp protease LPH41_03265 PF05698 Bacterial trigger factor protein (TF) C-terminus LPH41_03265 PF05697 Bacterial trigger factor protein (TF) LPH41_03280 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LPH41_03280 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LPH41_03280 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LPH41_03295 PF00561 alpha/beta hydrolase fold LPH41_03300 PF13335 Magnesium chelatase, subunit ChlI C-terminal LPH41_03300 PF01078 Magnesium chelatase, subunit ChlI LPH41_03305 PF04380 Membrane fusogenic activity LPH41_03310 PF01196 Ribosomal protein L17 LPH41_03315 PF01000 RNA polymerase Rpb3/RpoA insert domain LPH41_03315 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LPH41_03315 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LPH41_03320 PF00163 Ribosomal protein S4/S9 N-terminal domain LPH41_03320 PF01479 S4 domain LPH41_03325 PF00411 Ribosomal protein S11 LPH41_03330 PF00416 Ribosomal protein S13/S18 LPH41_03335 PF00344 SecY translocase LPH41_03340 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LPH41_03345 PF00327 Ribosomal protein L30p/L7e LPH41_03350 PF00333 Ribosomal protein S5, N-terminal domain LPH41_03350 PF03719 Ribosomal protein S5, C-terminal domain LPH41_03355 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LPH41_03360 PF00347 Ribosomal protein L6 LPH41_03365 PF00410 Ribosomal protein S8 LPH41_03370 PF00253 Ribosomal protein S14p/S29e LPH41_03375 PF00673 ribosomal L5P family C-terminus LPH41_03375 PF00281 Ribosomal protein L5 LPH41_03380 PF00467 KOW motif LPH41_03380 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LPH41_03385 PF00238 Ribosomal protein L14p/L23e LPH41_03390 PF00366 Ribosomal protein S17 LPH41_03395 PF00831 Ribosomal L29 protein LPH41_03400 PF00252 Ribosomal protein L16p/L10e LPH41_03405 PF07650 KH domain LPH41_03405 PF00189 Ribosomal protein S3, C-terminal domain LPH41_03410 PF00237 Ribosomal protein L22p/L17e LPH41_03415 PF00203 Ribosomal protein S19 LPH41_03420 PF00181 Ribosomal Proteins L2, RNA binding domain LPH41_03420 PF03947 Ribosomal Proteins L2, C-terminal domain LPH41_03425 PF00276 Ribosomal protein L23 LPH41_03430 PF00573 Ribosomal protein L4/L1 family LPH41_03435 PF00297 Ribosomal protein L3 LPH41_03440 PF00338 Ribosomal protein S10p/S20e LPH41_03450 PF00119 ATP synthase A chain LPH41_03455 PF00137 ATP synthase subunit C LPH41_03460 PF00430 ATP synthase B/B' CF(0) LPH41_03465 PF00213 ATP synthase delta (OSCP) subunit LPH41_03470 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LPH41_03470 PF02874 ATP synthase alpha/beta family, beta-barrel domain LPH41_03470 PF00306 ATP synthase alpha/beta chain, C terminal domain LPH41_03475 PF00231 ATP synthase LPH41_03480 PF02874 ATP synthase alpha/beta family, beta-barrel domain LPH41_03480 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LPH41_03485 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LPH41_03485 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LPH41_03495 PF00132 Bacterial transferase hexapeptide (six repeats) LPH41_03495 PF14602 Hexapeptide repeat of succinyl-transferase LPH41_03495 PF12804 MobA-like NTP transferase domain LPH41_03510 PF00248 Aldo/keto reductase family LPH41_03525 PF08240 Alcohol dehydrogenase GroES-like domain LPH41_03525 PF00107 Zinc-binding dehydrogenase LPH41_03535 PF03358 NADPH-dependent FMN reductase LPH41_03540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH41_03540 PF03466 LysR substrate binding domain LPH41_03560 PF06250 YhcG PDDEXK nuclease domain LPH41_03560 PF17761 DUF1016 N-terminal domain LPH41_03570 PF01523 Putative modulator of DNA gyrase LPH41_03575 PF04751 Protein of unknown function (DUF615) LPH41_03580 PF01523 Putative modulator of DNA gyrase LPH41_03590 PF00575 S1 RNA binding domain LPH41_03590 PF10150 Ribonuclease E/G family LPH41_03595 PF02545 Maf-like protein LPH41_03605 PF02219 Methylenetetrahydrofolate reductase LPH41_03615 PF00293 NUDIX domain LPH41_03635 PF08245 Mur ligase middle domain LPH41_03645 PF00696 Amino acid kinase family LPH41_03645 PF01842 ACT domain LPH41_03650 PF00378 Enoyl-CoA hydratase/isomerase LPH41_03655 PF00072 Response regulator receiver domain LPH41_03655 PF01627 Hpt domain LPH41_03655 PF00512 His Kinase A (phospho-acceptor) domain LPH41_03655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH41_03660 PF00072 Response regulator receiver domain LPH41_03665 PF01336 OB-fold nucleic acid binding domain LPH41_03665 PF00152 tRNA synthetases class II (D, K and N) LPH41_03675 PF17768 RecJ OB domain LPH41_03675 PF01368 DHH family LPH41_03675 PF02272 DHHA1 domain LPH41_03685 PF01272 Transcription elongation factor, GreA/GreB, C-term LPH41_03685 PF03449 Transcription elongation factor, N-terminal LPH41_03690 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LPH41_03690 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LPH41_03690 PF02142 MGS-like domain LPH41_03695 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LPH41_03695 PF00117 Glutamine amidotransferase class-I LPH41_03700 PF05173 Dihydrodipicolinate reductase, C-terminus LPH41_03700 PF01113 Dihydrodipicolinate reductase, N-terminus LPH41_03705 PF01612 3'-5' exonuclease LPH41_03705 PF00476 DNA polymerase family A LPH41_03705 PF01367 5'-3' exonuclease, C-terminal SAM fold LPH41_03705 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LPH41_03825 PF07963 Prokaryotic N-terminal methylation motif LPH41_03825 PF00114 Pilin (bacterial filament) LPH41_03840 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase LPH41_03845 PF01029 NusB family LPH41_03845 PF01189 16S rRNA methyltransferase RsmB/F LPH41_03850 PF00551 Formyl transferase LPH41_03850 PF02911 Formyl transferase, C-terminal domain LPH41_03855 PF01327 Polypeptide deformylase LPH41_03865 PF02481 DNA recombination-mediator protein A LPH41_03865 PF17782 DprA winged helix domain LPH41_03870 PF04361 Protein of unknown function (DUF494) LPH41_03880 PF01131 DNA topoisomerase LPH41_03880 PF01751 Toprim domain LPH41_03880 PF13368 Topoisomerase C-terminal repeat LPH41_03885 PF01300 Telomere recombination LPH41_03900 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LPH41_03900 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LPH41_03905 PF03358 NADPH-dependent FMN reductase LPH41_03930 PF13091 PLD-like domain LPH41_03945 PF01883 Iron-sulfur cluster assembly protein LPH41_03945 PF10609 NUBPL iron-transfer P-loop NTPase LPH41_03950 PF02606 Tetraacyldisaccharide-1-P 4'-kinase LPH41_03955 PF00005 ABC transporter LPH41_03955 PF00664 ABC transporter transmembrane region LPH41_03970 PF00753 Metallo-beta-lactamase superfamily LPH41_03970 PF03772 Competence protein LPH41_03975 PF00005 ABC transporter LPH41_03980 PF12704 MacB-like periplasmic core domain LPH41_03980 PF02687 FtsX-like permease family LPH41_03990 PF03937 Flavinator of succinate dehydrogenase LPH41_03995 PF13085 2Fe-2S iron-sulfur cluster binding domain LPH41_03995 PF13237 4Fe-4S dicluster domain LPH41_04000 PF00890 FAD binding domain LPH41_04000 PF02910 Fumarate reductase flavoprotein C-term LPH41_04005 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LPH41_04010 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LPH41_04025 PF17912 MalK OB fold domain LPH41_04025 PF00005 ABC transporter LPH41_04030 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LPH41_04030 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LPH41_04035 PF02685 Glucokinase LPH41_04040 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LPH41_04045 PF00920 Dehydratase family LPH41_04050 PF01081 KDPG and KHG aldolase LPH41_04125 PF00696 Amino acid kinase family LPH41_04130 PF04305 Protein of unknown function (DUF455) LPH41_04160 PF01765 Ribosome recycling factor LPH41_04165 PF01255 Putative undecaprenyl diphosphate synthase LPH41_04175 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LPH41_04175 PF13288 DXP reductoisomerase C-terminal domain LPH41_04175 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LPH41_04180 PF02163 Peptidase family M50 LPH41_04180 PF17820 PDZ domain LPH41_04185 PF07244 Surface antigen variable number repeat LPH41_04185 PF01103 Surface antigen LPH41_04190 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LPH41_04190 PF00132 Bacterial transferase hexapeptide (six repeats) LPH41_04195 PF07977 FabA-like domain LPH41_04200 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LPH41_04200 PF00132 Bacterial transferase hexapeptide (six repeats) LPH41_04205 PF02684 Lipid-A-disaccharide synthetase LPH41_04210 PF01351 Ribonuclease HII LPH41_04225 PF05221 S-adenosyl-L-homocysteine hydrolase LPH41_04225 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain LPH41_04235 PF01553 Acyltransferase LPH41_04265 PF12951 Passenger-associated-transport-repeat LPH41_04265 PF00082 Subtilase family LPH41_04265 PF03797 Autotransporter beta-domain LPH41_04300 PF04376 Arginine-tRNA-protein transferase, N terminus LPH41_04300 PF04377 Arginine-tRNA-protein transferase, C terminus LPH41_04315 PF01566 Natural resistance-associated macrophage protein LPH41_04320 PF01325 Iron dependent repressor, N-terminal DNA binding domain LPH41_04320 PF02742 Iron dependent repressor, metal binding and dimerisation domain LPH41_04325 PF14437 MafB19-like deaminase LPH41_04330 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) LPH41_04330 PF06594 Haemolysin-type calcium binding protein related domain LPH41_04370 PF02796 Helix-turn-helix domain of resolvase LPH41_04370 PF00239 Resolvase, N terminal domain LPH41_04395 PF00239 Resolvase, N terminal domain LPH41_04395 PF02796 Helix-turn-helix domain of resolvase LPH41_04400 PF09386 Antitoxin ParD LPH41_04405 PF05016 ParE toxin of type II toxin-antitoxin system, parDE LPH41_04410 PF03466 LysR substrate binding domain LPH41_04410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH41_04430 PF02627 Carboxymuconolactone decarboxylase family LPH41_04440 PF01593 Flavin containing amine oxidoreductase LPH41_04485 PF03524 Conjugal transfer protein LPH41_04515 PF13700 Domain of unknown function (DUF4158) LPH41_04515 PF01526 Tn3 transposase DDE domain LPH41_04530 PF02796 Helix-turn-helix domain of resolvase LPH41_04530 PF00239 Resolvase, N terminal domain LPH41_04555 PF00239 Resolvase, N terminal domain LPH41_04555 PF02796 Helix-turn-helix domain of resolvase LPH41_04565 PF00171 Aldehyde dehydrogenase family LPH41_04570 PF00696 Amino acid kinase family LPH41_04570 PF01472 PUA domain LPH41_04580 PF00206 Lyase LPH41_04585 PF01118 Semialdehyde dehydrogenase, NAD binding domain LPH41_04595 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase LPH41_04595 PF00696 Amino acid kinase family LPH41_04600 PF07687 Peptidase dimerisation domain LPH41_04600 PF01546 Peptidase family M20/M25/M40 LPH41_04605 PF00764 Arginosuccinate synthase LPH41_04610 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LPH41_04610 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LPH41_04620 PF01406 tRNA synthetases class I (C) catalytic domain LPH41_04620 PF09190 DALR domain LPH41_04625 PF02657 Fe-S metabolism associated domain LPH41_04650 PF01258 Prokaryotic dksA/traR C4-type zinc finger LPH41_04655 PF01809 Putative membrane protein insertion efficiency factor LPH41_04660 PF01979 Amidohydrolase family LPH41_04665 PF01476 LysM domain LPH41_04665 PF01551 Peptidase family M23 LPH41_04670 PF00990 Diguanylate cyclase, GGDEF domain LPH41_04680 PF00037 4Fe-4S binding domain LPH41_04690 PF01467 Cytidylyltransferase-like LPH41_04700 PF00183 Hsp90 protein LPH41_04700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH41_04705 PF00390 Malic enzyme, N-terminal domain LPH41_04705 PF01515 Phosphate acetyl/butaryl transferase LPH41_04705 PF03949 Malic enzyme, NAD binding domain LPH41_04710 PF00375 Sodium:dicarboxylate symporter family LPH41_04720 PF00072 Response regulator receiver domain LPH41_04720 PF01627 Hpt domain LPH41_04720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH41_04720 PF00672 HAMP domain LPH41_04720 PF00512 His Kinase A (phospho-acceptor) domain LPH41_04725 PF00072 Response regulator receiver domain LPH41_04725 PF00196 Bacterial regulatory proteins, luxR family LPH41_04735 PF00512 His Kinase A (phospho-acceptor) domain LPH41_04735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH41_04735 PF08521 Two-component sensor kinase N-terminal LPH41_04740 PF00072 Response regulator receiver domain LPH41_04740 PF00486 Transcriptional regulatory protein, C terminal LPH41_04750 PF03600 Citrate transporter LPH41_04755 PF00106 short chain dehydrogenase LPH41_04760 PF00361 Proton-conducting membrane transporter LPH41_04765 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus LPH41_04765 PF00361 Proton-conducting membrane transporter LPH41_04770 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LPH41_04770 PF00361 Proton-conducting membrane transporter LPH41_04775 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LPH41_04780 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LPH41_04785 PF12838 4Fe-4S dicluster domain LPH41_04790 PF00146 NADH dehydrogenase LPH41_04795 PF00384 Molybdopterin oxidoreductase LPH41_04795 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal LPH41_04795 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LPH41_04800 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LPH41_04800 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LPH41_04800 PF10531 SLBB domain LPH41_04810 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LPH41_04815 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LPH41_04820 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LPH41_04825 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LPH41_04840 PF00121 Triosephosphate isomerase LPH41_04860 PF18766 SWI2/SNF2 ATPase LPH41_04860 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LPH41_04860 PF11867 Domain of unknown function (DUF3387) LPH41_04875 PF01420 Type I restriction modification DNA specificity domain LPH41_04880 PF02384 N-6 DNA Methylase LPH41_04895 PF06434 Aconitate hydratase 2 N-terminus LPH41_04895 PF11791 Aconitate B N-terminal domain LPH41_04895 PF00330 Aconitase family (aconitate hydratase) LPH41_04910 PF00330 Aconitase family (aconitate hydratase) LPH41_04910 PF00694 Aconitase C-terminal domain LPH41_04915 PF00501 AMP-binding enzyme LPH41_04915 PF13193 AMP-binding enzyme C-terminal domain LPH41_04920 PF01370 NAD dependent epimerase/dehydratase family LPH41_04920 PF08338 Domain of unknown function (DUF1731) LPH41_04925 PF00595 PDZ domain LPH41_04945 PF01594 AI-2E family transporter LPH41_04955 PF00883 Cytosol aminopeptidase family, catalytic domain LPH41_04955 PF02789 Cytosol aminopeptidase family, N-terminal domain LPH41_04960 PF00892 EamA-like transporter family LPH41_04985 PF01569 PAP2 superfamily LPH41_04990 PF08245 Mur ligase middle domain LPH41_04990 PF02875 Mur ligase family, glutamate ligase domain LPH41_04990 PF01225 Mur ligase family, catalytic domain LPH41_05000 PF00365 Phosphofructokinase LPH41_05010 PF07669 Eco57I restriction-modification methylase LPH41_05015 PF06779 Uncharacterised MFS-type transporter YbfB LPH41_05020 PF00082 Subtilase family LPH41_05020 PF12951 Passenger-associated-transport-repeat LPH41_05020 PF03797 Autotransporter beta-domain LPH41_05025 PF00082 Subtilase family LPH41_05025 PF12951 Passenger-associated-transport-repeat LPH41_05025 PF03797 Autotransporter beta-domain LPH41_05075 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LPH41_05075 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LPH41_05075 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LPH41_05075 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LPH41_05080 PF00483 Nucleotidyl transferase LPH41_05080 PF01050 Mannose-6-phosphate isomerase LPH41_05085 PF04321 RmlD substrate binding domain LPH41_05090 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LPH41_05095 PF00483 Nucleotidyl transferase LPH41_05100 PF16363 GDP-mannose 4,6 dehydratase LPH41_05105 PF01012 Electron transfer flavoprotein domain LPH41_05110 PF01012 Electron transfer flavoprotein domain LPH41_05110 PF00766 Electron transfer flavoprotein FAD-binding domain LPH41_05115 PF00270 DEAD/DEAH box helicase LPH41_05115 PF00271 Helicase conserved C-terminal domain LPH41_05115 PF03880 DbpA RNA binding domain LPH41_05135 PF00999 Sodium/hydrogen exchanger family LPH41_05145 PF00873 AcrB/AcrD/AcrF family LPH41_05150 PF05368 NmrA-like family LPH41_05155 PF01638 HxlR-like helix-turn-helix LPH41_05160 PF00013 KH domain LPH41_05160 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LPH41_05160 PF01138 3' exoribonuclease family, domain 1 LPH41_05160 PF00575 S1 RNA binding domain LPH41_05160 PF03725 3' exoribonuclease family, domain 2 LPH41_05165 PF00312 Ribosomal protein S15 LPH41_05170 PF09157 Pseudouridine synthase II TruB, C-terminal LPH41_05170 PF16198 tRNA pseudouridylate synthase B C-terminal domain LPH41_05170 PF01509 TruB family pseudouridylate synthase (N terminal domain) LPH41_05175 PF02033 Ribosome-binding factor A LPH41_05180 PF00009 Elongation factor Tu GTP binding domain LPH41_05180 PF11987 Translation-initiation factor 2 LPH41_05180 PF08364 Bacterial translation initiation factor IF-2 associated region LPH41_05180 PF04760 Translation initiation factor IF-2, N-terminal region LPH41_05185 PF13184 NusA-like KH domain LPH41_05185 PF00575 S1 RNA binding domain LPH41_05185 PF08529 NusA N-terminal domain LPH41_05190 PF02576 RimP N-terminal domain LPH41_05190 PF17384 RimP C-terminal SH3 domain LPH41_05200 PF00342 Phosphoglucose isomerase LPH41_05205 PF02261 Aspartate decarboxylase LPH41_05210 PF02569 Pantoate-beta-alanine ligase LPH41_05215 PF02548 Ketopantoate hydroxymethyltransferase LPH41_05220 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LPH41_05225 PF12627 Probable RNA and SrmB- binding site of polymerase A LPH41_05225 PF12626 Polymerase A arginine-rich C-terminus LPH41_05225 PF01743 Poly A polymerase head domain LPH41_05235 PF07549 SecD/SecF GG Motif LPH41_05235 PF02355 Protein export membrane protein LPH41_05240 PF02355 Protein export membrane protein LPH41_05240 PF13721 SecD export protein N-terminal TM region LPH41_05240 PF07549 SecD/SecF GG Motif LPH41_05245 PF02699 Preprotein translocase subunit LPH41_05250 PF01702 Queuine tRNA-ribosyltransferase LPH41_05265 PF01321 Creatinase/Prolidase N-terminal domain LPH41_05265 PF00557 Metallopeptidase family M24 LPH41_05290 PF12849 PBP superfamily domain LPH41_05305 PF00218 Indole-3-glycerol phosphate synthase LPH41_05310 PF00591 Glycosyl transferase family, a/b domain LPH41_05310 PF02885 Glycosyl transferase family, helical bundle domain LPH41_05315 PF00117 Glutamine amidotransferase class-I LPH41_05320 PF00425 chorismate binding enzyme LPH41_05320 PF04715 Anthranilate synthase component I, N terminal region LPH41_05330 PF00834 Ribulose-phosphate 3 epimerase family LPH41_05335 PF05099 Tellurite resistance protein TerB LPH41_05335 PF00226 DnaJ domain LPH41_05340 PF01259 SAICAR synthetase LPH41_05345 PF07733 Bacterial DNA polymerase III alpha NTPase domain LPH41_05345 PF14579 Helix-hairpin-helix motif LPH41_05345 PF02811 PHP domain LPH41_05345 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LPH41_05345 PF01336 OB-fold nucleic acid binding domain LPH41_05350 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LPH41_05355 PF03653 Uncharacterised protein family (UPF0093) LPH41_05380 PF01242 6-pyruvoyl tetrahydropterin synthase LPH41_05385 PF00271 Helicase conserved C-terminal domain LPH41_05385 PF00270 DEAD/DEAH box helicase LPH41_05395 PF04452 RNA methyltransferase LPH41_05400 PF00202 Aminotransferase class-III LPH41_05405 PF00293 NUDIX domain LPH41_05410 PF00459 Inositol monophosphatase family LPH41_05415 PF03819 MazG nucleotide pyrophosphohydrolase domain LPH41_05420 PF01145 SPFH domain / Band 7 family LPH41_05420 PF16200 C-terminal region of band_7 LPH41_05430 PF08669 Glycine cleavage T-protein C-terminal barrel domain LPH41_05430 PF01571 Aminomethyltransferase folate-binding domain LPH41_05435 PF01597 Glycine cleavage H-protein LPH41_05450 PF01026 TatD related DNase LPH41_05455 PF00535 Glycosyl transferase family 2 LPH41_05460 PF03006 Haemolysin-III related LPH41_05465 PF16658 Class II release factor RF3, C-terminal domain LPH41_05465 PF00009 Elongation factor Tu GTP binding domain LPH41_05490 PF01578 Cytochrome C assembly protein LPH41_05495 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LPH41_05495 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LPH41_05525 PF00579 tRNA synthetases class I (W and Y) LPH41_05530 PF04225 Opacity-associated protein A LysM-like domain LPH41_05530 PF01551 Peptidase family M23 LPH41_05535 PF03702 Anhydro-N-acetylmuramic acid kinase LPH41_05540 PF07690 Major Facilitator Superfamily LPH41_05585 PF00156 Phosphoribosyl transferase domain LPH41_05595 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LPH41_05595 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LPH41_05595 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LPH41_05595 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LPH41_05600 PF00692 dUTPase LPH41_05605 PF02441 Flavoprotein LPH41_05605 PF04127 DNA / pantothenate metabolism flavoprotein LPH41_05610 PF04002 RadC-like JAB domain LPH41_05615 PF05746 DALR anticodon binding domain LPH41_05615 PF03485 Arginyl tRNA synthetase N terminal domain LPH41_05615 PF00750 tRNA synthetases class I (R) LPH41_05625 PF00106 short chain dehydrogenase LPH41_05630 PF17810 Arginine decarboxylase helical bundle domain LPH41_05630 PF17944 Arginine decarboxylase C-terminal helical extension LPH41_05630 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LPH41_05635 PF17284 Spermidine synthase tetramerisation domain LPH41_05650 PF01380 SIS domain LPH41_05670 PF00883 Cytosol aminopeptidase family, catalytic domain LPH41_05670 PF02789 Cytosol aminopeptidase family, N-terminal domain LPH41_05690 PF08264 Anticodon-binding domain of tRNA LPH41_05690 PF00133 tRNA synthetases class I (I, L, M and V) LPH41_05690 PF10458 Valyl tRNA synthetase tRNA binding arm LPH41_05695 PF05275 Copper resistance protein B precursor (CopB) LPH41_05700 PF00394 Multicopper oxidase LPH41_05700 PF07731 Multicopper oxidase LPH41_05700 PF07732 Multicopper oxidase LPH41_05715 PF01432 Peptidase family M3 LPH41_05725 PF02599 Global regulator protein family LPH41_05730 PF02272 DHHA1 domain LPH41_05730 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LPH41_05730 PF01411 tRNA synthetases class II (A) LPH41_05735 PF00154 recA bacterial DNA recombination protein LPH41_05740 PF00717 Peptidase S24-like LPH41_05740 PF01726 LexA DNA binding domain LPH41_05750 PF03060 Nitronate monooxygenase LPH41_05760 PF00733 Asparagine synthase LPH41_05760 PF13537 Glutamine amidotransferase domain LPH41_05765 PF01546 Peptidase family M20/M25/M40 LPH41_05765 PF07687 Peptidase dimerisation domain LPH41_05770 PF03960 ArsC family LPH41_05775 PF14602 Hexapeptide repeat of succinyl-transferase LPH41_05775 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal LPH41_05775 PF00132 Bacterial transferase hexapeptide (six repeats) LPH41_05785 PF00557 Metallopeptidase family M24 LPH41_05790 PF01245 Ribosomal protein L19 LPH41_05795 PF01746 tRNA (Guanine-1)-methyltransferase LPH41_05800 PF05239 PRC-barrel domain LPH41_05800 PF01782 RimM N-terminal domain LPH41_05805 PF00886 Ribosomal protein S16 LPH41_05820 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) LPH41_05825 PF03279 Bacterial lipid A biosynthesis acyltransferase LPH41_05855 PF00920 Dehydratase family LPH41_05870 PF01985 CRS1 / YhbY (CRM) domain LPH41_05875 PF01728 FtsJ-like methyltransferase LPH41_05880 PF01434 Peptidase family M41 LPH41_05880 PF06480 FtsH Extracellular LPH41_05880 PF17862 AAA+ lid domain LPH41_05880 PF00004 ATPase family associated with various cellular activities (AAA) LPH41_05885 PF00809 Pterin binding enzyme LPH41_05895 PF17209 Hfq protein LPH41_05900 PF01926 50S ribosome-binding GTPase LPH41_05900 PF13167 GTP-binding GTPase N-terminal LPH41_05900 PF16360 GTP-binding GTPase Middle Region LPH41_05905 PF00083 Sugar (and other) transporter LPH41_05910 PF02464 Competence-damaged protein LPH41_05915 PF16970 Type-1 fimbrial protein, A LPH41_05920 PF02753 Pili assembly chaperone PapD, C-terminal domain LPH41_05920 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LPH41_05925 PF13953 PapC C-terminal domain LPH41_05925 PF13954 PapC N-terminal domain LPH41_05925 PF00577 Outer membrane usher protein LPH41_05945 PF00448 SRP54-type protein, GTPase domain LPH41_05945 PF02881 SRP54-type protein, helical bundle domain LPH41_05945 PF02978 Signal peptide binding domain LPH41_05950 PF01578 Cytochrome C assembly protein LPH41_05955 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LPH41_05955 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LPH41_05990 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family LPH41_06005 PF01040 UbiA prenyltransferase family LPH41_06010 PF01734 Patatin-like phospholipase LPH41_06015 PF04055 Radical SAM superfamily LPH41_06015 PF06968 Biotin and Thiamin Synthesis associated domain LPH41_06030 PF02195 ParB-like nuclease domain LPH41_06030 PF06613 KorB C-terminal beta-barrel domain LPH41_06030 PF08535 KorB domain LPH41_06040 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ LPH41_06050 PF00175 Oxidoreductase NAD-binding domain LPH41_06050 PF00970 Oxidoreductase FAD-binding domain LPH41_06050 PF00042 Globin LPH41_06055 PF13361 UvrD-like helicase C-terminal domain LPH41_06055 PF00580 UvrD/REP helicase N-terminal domain LPH41_06060 PF00289 Biotin carboxylase, N-terminal domain LPH41_06060 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LPH41_06060 PF02785 Biotin carboxylase C-terminal domain LPH41_06065 PF00364 Biotin-requiring enzyme LPH41_06070 PF01220 Dehydroquinase class II LPH41_06075 PF02559 CarD-like/TRCF domain LPH41_06075 PF00271 Helicase conserved C-terminal domain LPH41_06075 PF03461 TRCF domain LPH41_06075 PF17757 UvrB interaction domain LPH41_06075 PF00270 DEAD/DEAH box helicase LPH41_06085 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ LPH41_06110 PF01741 Large-conductance mechanosensitive channel, MscL LPH41_06115 PF00155 Aminotransferase class I and II LPH41_06120 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LPH41_06125 PF00114 Pilin (bacterial filament) LPH41_06125 PF07963 Prokaryotic N-terminal methylation motif LPH41_06130 PF05567 Neisseria PilC beta-propeller domain LPH41_06150 PF00114 Pilin (bacterial filament) LPH41_06150 PF07963 Prokaryotic N-terminal methylation motif LPH41_06155 PF00793 DAHP synthetase I family LPH41_06180 PF01218 Coproporphyrinogen III oxidase LPH41_06200 PF02472 Biopolymer transport protein ExbD/TolR LPH41_06205 PF02472 Biopolymer transport protein ExbD/TolR LPH41_06210 PF01618 MotA/TolQ/ExbB proton channel family LPH41_06225 PF01435 Peptidase family M48 LPH41_06235 PF00986 DNA gyrase B subunit, carboxyl terminus LPH41_06235 PF00204 DNA gyrase B LPH41_06235 PF01751 Toprim domain LPH41_06235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH41_06235 PF18053 DNA gyrase B subunit insert domain LPH41_06240 PF02463 RecF/RecN/SMC N terminal domain LPH41_06245 PF02768 DNA polymerase III beta subunit, C-terminal domain LPH41_06245 PF02767 DNA polymerase III beta subunit, central domain LPH41_06245 PF00712 DNA polymerase III beta subunit, N-terminal domain LPH41_06250 PF08299 Bacterial dnaA protein helix-turn-helix LPH41_06250 PF00308 Bacterial dnaA protein LPH41_06250 PF11638 DnaA N-terminal domain LPH41_06255 PF00468 Ribosomal protein L34 LPH41_06260 PF00825 Ribonuclease P LPH41_06265 PF02096 60Kd inner membrane protein LPH41_06265 PF14849 YidC periplasmic domain LPH41_06275 PF01926 50S ribosome-binding GTPase LPH41_06275 PF12631 MnmE helical domain LPH41_06275 PF10396 GTP-binding protein TrmE N-terminus LPH41_06280 PF02629 CoA binding domain LPH41_06280 PF00549 CoA-ligase LPH41_06285 PF08442 ATP-grasp domain LPH41_06285 PF00549 CoA-ligase LPH41_06290 PF00512 His Kinase A (phospho-acceptor) domain LPH41_06290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH41_06295 PF02954 Bacterial regulatory protein, Fis family LPH41_06295 PF00072 Response regulator receiver domain LPH41_06295 PF00158 Sigma-54 interaction domain LPH41_06300 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LPH41_06300 PF00437 Type II/IV secretion system protein LPH41_06310 PF07963 Prokaryotic N-terminal methylation motif LPH41_06310 PF00114 Pilin (bacterial filament) LPH41_06315 PF00114 Pilin (bacterial filament) LPH41_06315 PF07963 Prokaryotic N-terminal methylation motif LPH41_06325 PF00114 Pilin (bacterial filament) LPH41_06325 PF07963 Prokaryotic N-terminal methylation motif LPH41_06330 PF00482 Type II secretion system (T2SS), protein F LPH41_06335 PF01478 Type IV leader peptidase family LPH41_06335 PF06750 Bacterial Peptidase A24 N-terminal domain LPH41_06340 PF01121 Dephospho-CoA kinase LPH41_06345 PF11808 Phosphate regulon sensor protein PhoR LPH41_06345 PF00989 PAS fold LPH41_06345 PF00512 His Kinase A (phospho-acceptor) domain LPH41_06345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH41_06350 PF00486 Transcriptional regulatory protein, C terminal LPH41_06350 PF00072 Response regulator receiver domain LPH41_06355 PF08443 RimK-like ATP-grasp domain LPH41_06355 PF18030 RimK PreATP-grasp domain LPH41_06365 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LPH41_06365 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LPH41_06365 PF02824 TGS domain LPH41_06365 PF03129 Anticodon binding domain LPH41_06370 PF05198 Translation initiation factor IF-3, N-terminal domain LPH41_06370 PF00707 Translation initiation factor IF-3, C-terminal domain LPH41_06375 PF01632 Ribosomal protein L35 LPH41_06380 PF00453 Ribosomal protein L20 LPH41_06385 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LPH41_06385 PF01409 tRNA synthetases class II core domain (F) LPH41_06390 PF01588 Putative tRNA binding domain LPH41_06390 PF03147 Ferredoxin-fold anticodon binding domain LPH41_06390 PF03484 tRNA synthetase B5 domain LPH41_06390 PF03483 B3/4 domain LPH41_06390 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LPH41_06395 PF00216 Bacterial DNA-binding protein LPH41_06425 PF01612 3'-5' exonuclease LPH41_06425 PF00570 HRDC domain LPH41_06440 PF13742 OB-fold nucleic acid binding domain LPH41_06440 PF02601 Exonuclease VII, large subunit LPH41_06445 PF03853 YjeF-related protein N-terminus LPH41_06445 PF01256 Carbohydrate kinase LPH41_06450 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LPH41_06455 PF01520 N-acetylmuramoyl-L-alanine amidase LPH41_06455 PF11741 AMIN domain LPH41_06460 PF08676 MutL C terminal dimerisation domain LPH41_06460 PF01119 DNA mismatch repair protein, C-terminal domain LPH41_06470 PF00692 dUTPase LPH41_06495 PF07977 FabA-like domain LPH41_06525 PF00657 GDSL-like Lipase/Acylhydrolase LPH41_06525 PF03797 Autotransporter beta-domain LPH41_06535 PF05690 Thiazole biosynthesis protein ThiG LPH41_06540 PF02390 Putative methyltransferase LPH41_06545 PF02080 TrkA-C domain LPH41_06545 PF03600 Citrate transporter LPH41_06550 PF02381 MraZ protein, putative antitoxin-like LPH41_06555 PF01795 MraW methylase family LPH41_06560 PF04999 Cell division protein FtsL LPH41_06565 PF00905 Penicillin binding protein transpeptidase domain LPH41_06565 PF03717 Penicillin-binding Protein dimerisation domain LPH41_06570 PF02875 Mur ligase family, glutamate ligase domain LPH41_06570 PF08245 Mur ligase middle domain LPH41_06570 PF01225 Mur ligase family, catalytic domain LPH41_06575 PF08245 Mur ligase middle domain LPH41_06575 PF02875 Mur ligase family, glutamate ligase domain LPH41_06575 PF01225 Mur ligase family, catalytic domain LPH41_06580 PF00953 Glycosyl transferase family 4 LPH41_06585 PF01098 Cell cycle protein LPH41_06590 PF03033 Glycosyltransferase family 28 N-terminal domain LPH41_06590 PF04101 Glycosyltransferase family 28 C-terminal domain LPH41_06595 PF01225 Mur ligase family, catalytic domain LPH41_06595 PF08245 Mur ligase middle domain LPH41_06595 PF02875 Mur ligase family, glutamate ligase domain LPH41_06600 PF07478 D-ala D-ala ligase C-terminus LPH41_06605 PF08478 POTRA domain, FtsQ-type LPH41_06605 PF03799 Cell division protein FtsQ LPH41_06610 PF02491 SHS2 domain inserted in FTSA LPH41_06615 PF00091 Tubulin/FtsZ family, GTPase domain LPH41_06615 PF12327 FtsZ family, C-terminal domain LPH41_06620 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LPH41_06630 PF01551 Peptidase family M23 LPH41_06630 PF08525 Opacity-associated protein A N-terminal motif LPH41_06630 PF01476 LysM domain LPH41_06635 PF01043 SecA preprotein cross-linking domain LPH41_06635 PF07516 SecA Wing and Scaffold domain LPH41_06635 PF07517 SecA DEAD-like domain LPH41_06635 PF02810 SEC-C motif LPH41_06640 PF03330 Lytic transglycolase LPH41_06655 PF05193 Peptidase M16 inactive domain LPH41_06655 PF00675 Insulinase (Peptidase family M16) LPH41_06665 PF00553 Cellulose binding domain LPH41_06665 PF00150 Cellulase (glycosyl hydrolase family 5) LPH41_06680 PF01475 Ferric uptake regulator family LPH41_06685 PF00749 tRNA synthetases class I (E and Q), catalytic domain LPH41_06700 PF00162 Phosphoglycerate kinase LPH41_06705 PF00224 Pyruvate kinase, barrel domain LPH41_06705 PF02887 Pyruvate kinase, alpha/beta domain LPH41_06715 PF00274 Fructose-bisphosphate aldolase class-I LPH41_06725 PF00291 Pyridoxal-phosphate dependent enzyme LPH41_06730 PF10414 Sirohaem synthase dimerisation region LPH41_06730 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LPH41_06730 PF14824 Sirohaem biosynthesis protein central LPH41_06735 PF03466 LysR substrate binding domain LPH41_06735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH41_06745 PF02525 Flavodoxin-like fold LPH41_06750 PF12833 Helix-turn-helix domain LPH41_06750 PF06719 AraC-type transcriptional regulator N-terminus LPH41_06755 PF01494 FAD binding domain LPH41_06760 PF01494 FAD binding domain LPH41_06770 PF04453 LPS transport system D LPH41_06775 PF00639 PPIC-type PPIASE domain LPH41_06775 PF09312 SurA N-terminal domain LPH41_06780 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LPH41_06785 PF01301 Glycosyl hydrolases family 35 LPH41_06790 PF17678 Glycosyl hydrolase family 92 N-terminal domain LPH41_06790 PF07971 Glycosyl hydrolase family 92 LPH41_06805 PF07691 PA14 domain LPH41_06805 PF01915 Glycosyl hydrolase family 3 C-terminal domain LPH41_06805 PF00933 Glycosyl hydrolase family 3 N terminal domain LPH41_06805 PF14310 Fibronectin type III-like domain LPH41_06815 PF07691 PA14 domain LPH41_06815 PF00728 Glycosyl hydrolase family 20, catalytic domain LPH41_06815 PF02838 Glycosyl hydrolase family 20, domain 2 LPH41_06825 PF01641 SelR domain LPH41_06835 PF01266 FAD dependent oxidoreductase LPH41_06840 PF01168 Alanine racemase, N-terminal domain LPH41_06840 PF00842 Alanine racemase, C-terminal domain LPH41_06855 PF01551 Peptidase family M23 LPH41_06855 PF01476 LysM domain LPH41_06870 PF01975 Survival protein SurE LPH41_06880 PF01551 Peptidase family M23 LPH41_06885 PF00561 alpha/beta hydrolase fold LPH41_06890 PF01053 Cys/Met metabolism PLP-dependent enzyme LPH41_06900 PF01545 Cation efflux family LPH41_06910 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LPH41_06910 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPH41_06915 PF02817 e3 binding domain LPH41_06915 PF00364 Biotin-requiring enzyme LPH41_06915 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LPH41_06930 PF03180 NLPA lipoprotein LPH41_06935 PF00528 Binding-protein-dependent transport system inner membrane component LPH41_06940 PF09383 NIL domain LPH41_06940 PF00005 ABC transporter LPH41_06950 PF01522 Polysaccharide deacetylase LPH41_06955 PF00534 Glycosyl transferases group 1 LPH41_06960 PF00484 Carbonic anhydrase LPH41_06970 PF04851 Type III restriction enzyme, res subunit LPH41_06970 PF13307 Helicase C-terminal domain LPH41_06980 PF14814 Bifunctional transglycosylase second domain LPH41_06980 PF00905 Penicillin binding protein transpeptidase domain LPH41_06980 PF00912 Transglycosylase LPH41_07000 PF00106 short chain dehydrogenase LPH41_07005 PF01638 HxlR-like helix-turn-helix LPH41_07060 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) LPH41_07060 PF06594 Haemolysin-type calcium binding protein related domain LPH41_07110 PF02384 N-6 DNA Methylase LPH41_07115 PF02384 N-6 DNA Methylase LPH41_07120 PF01420 Type I restriction modification DNA specificity domain LPH41_07125 PF11867 Domain of unknown function (DUF3387) LPH41_07125 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LPH41_07125 PF18766 SWI2/SNF2 ATPase LPH41_07225 PF02384 N-6 DNA Methylase LPH41_07225 PF12161 HsdM N-terminal domain LPH41_07235 PF01420 Type I restriction modification DNA specificity domain LPH41_07240 PF18766 SWI2/SNF2 ATPase LPH41_07240 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LPH41_07240 PF12008 Type I restriction and modification enzyme - subunit R C terminal LPH41_07280 PF13332 Hemagglutinin repeat LPH41_07280 PF13018 Extended Signal Peptide of Type V secretion system LPH41_07280 PF05860 haemagglutination activity domain LPH41_07280 PF04829 Pre-toxin domain with VENN motif LPH41_07285 PF13332 Hemagglutinin repeat LPH41_07285 PF05860 haemagglutination activity domain LPH41_07285 PF04829 Pre-toxin domain with VENN motif LPH41_07360 PF03807 NADP oxidoreductase coenzyme F420-dependent LPH41_07360 PF14748 Pyrroline-5-carboxylate reductase dimerisation LPH41_07370 PF01493 GXGXG motif LPH41_07370 PF01645 Conserved region in glutamate synthase LPH41_07370 PF04898 Glutamate synthase central domain LPH41_07370 PF00310 Glutamine amidotransferases class-II LPH41_07375 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPH41_07375 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LPH41_07395 PF00150 Cellulase (glycosyl hydrolase family 5) LPH41_07405 PF01551 Peptidase family M23 LPH41_07410 PF13180 PDZ domain LPH41_07410 PF03572 Peptidase family S41 LPH41_07425 PF09704 CRISPR-associated protein (Cas_Cas5) LPH41_07430 PF03971 Monomeric isocitrate dehydrogenase LPH41_07435 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LPH41_07435 PF07498 Rho termination factor, N-terminal domain LPH41_07435 PF07497 Rho termination factor, RNA-binding domain LPH41_07440 PF00085 Thioredoxin LPH41_07445 PF00270 DEAD/DEAH box helicase LPH41_07445 PF00271 Helicase conserved C-terminal domain LPH41_07445 PF12300 ATP-dependent RNA helicase RhlB LPH41_07450 PF00005 ABC transporter LPH41_07455 PF18075 FtsX extracellular domain LPH41_07460 PF00072 Response regulator receiver domain LPH41_07460 PF01339 CheB methylesterase LPH41_07465 PF03167 Uracil DNA glycosylase superfamily LPH41_07470 PF04542 Sigma-70 region 2 LPH41_07470 PF00140 Sigma-70 factor, region 1.2 LPH41_07470 PF04545 Sigma-70, region 4 LPH41_07475 PF00270 DEAD/DEAH box helicase LPH41_07475 PF00271 Helicase conserved C-terminal domain LPH41_07475 PF17764 3′ DNA-binding domain (3′BD) LPH41_07475 PF18074 Primosomal protein N C-terminal domain LPH41_07475 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LPH41_07490 PF01554 MatE LPH41_07495 PF01343 Peptidase family S49 LPH41_07500 PF04349 Periplasmic glucan biosynthesis protein, MdoG LPH41_07510 PF00580 UvrD/REP helicase N-terminal domain LPH41_07510 PF13361 UvrD-like helicase C-terminal domain LPH41_07520 PF07731 Multicopper oxidase LPH41_07520 PF07732 Multicopper oxidase LPH41_07540 PF00731 AIR carboxylase LPH41_07545 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LPH41_07545 PF02222 ATP-grasp domain LPH41_07550 PF00462 Glutaredoxin LPH41_07555 PF01914 MarC family integral membrane protein LPH41_07565 PF12705 PD-(D/E)XK nuclease superfamily LPH41_07565 PF00580 UvrD/REP helicase N-terminal domain LPH41_07565 PF13361 UvrD-like helicase C-terminal domain LPH41_07570 PF00528 Binding-protein-dependent transport system inner membrane component LPH41_07575 PF00005 ABC transporter LPH41_07580 PF00528 Binding-protein-dependent transport system inner membrane component LPH41_07585 PF00497 Bacterial extracellular solute-binding proteins, family 3 LPH41_07650 PF01170 Putative RNA methylase family UPF0020 LPH41_07650 PF10672 S-adenosylmethionine-dependent methyltransferase LPH41_07650 PF02926 THUMP domain LPH41_07660 PF00472 RF-1 domain LPH41_07660 PF03462 PCRF domain LPH41_07665 PF01488 Shikimate / quinate 5-dehydrogenase LPH41_07665 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LPH41_07665 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LPH41_07675 PF03550 Outer membrane lipoprotein LolB LPH41_07680 PF08544 GHMP kinases C terminal LPH41_07680 PF00288 GHMP kinases N terminal domain LPH41_07690 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LPH41_07690 PF14572 Phosphoribosyl synthetase-associated domain LPH41_07695 PF01386 Ribosomal L25p family LPH41_07695 PF14693 Ribosomal protein TL5, C-terminal domain LPH41_07700 PF01195 Peptidyl-tRNA hydrolase LPH41_07705 PF01926 50S ribosome-binding GTPase LPH41_07705 PF06071 Protein of unknown function (DUF933) LPH41_07725 PF03144 Elongation factor Tu domain 2 LPH41_07725 PF00009 Elongation factor Tu GTP binding domain LPH41_07725 PF03143 Elongation factor Tu C-terminal domain LPH41_07735 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LPH41_07740 PF00467 KOW motif LPH41_07740 PF02357 Transcription termination factor nusG LPH41_07745 PF00298 Ribosomal protein L11, RNA binding domain LPH41_07745 PF03946 Ribosomal protein L11, N-terminal domain LPH41_07750 PF00687 Ribosomal protein L1p/L10e family LPH41_07755 PF00466 Ribosomal protein L10 LPH41_07760 PF00542 Ribosomal protein L7/L12 C-terminal domain LPH41_07760 PF16320 Ribosomal protein L7/L12 dimerisation domain LPH41_07765 PF04563 RNA polymerase beta subunit LPH41_07765 PF04565 RNA polymerase Rpb2, domain 3 LPH41_07765 PF10385 RNA polymerase beta subunit external 1 domain LPH41_07765 PF00562 RNA polymerase Rpb2, domain 6 LPH41_07765 PF04560 RNA polymerase Rpb2, domain 7 LPH41_07765 PF04561 RNA polymerase Rpb2, domain 2 LPH41_07770 PF04997 RNA polymerase Rpb1, domain 1 LPH41_07770 PF00623 RNA polymerase Rpb1, domain 2 LPH41_07770 PF04983 RNA polymerase Rpb1, domain 3 LPH41_07770 PF05000 RNA polymerase Rpb1, domain 4 LPH41_07770 PF04998 RNA polymerase Rpb1, domain 5 LPH41_07775 PF00164 Ribosomal protein S12/S23 LPH41_07780 PF00177 Ribosomal protein S7p/S5e LPH41_07785 PF00679 Elongation factor G C-terminus LPH41_07785 PF14492 Elongation Factor G, domain II LPH41_07785 PF03764 Elongation factor G, domain IV LPH41_07785 PF00009 Elongation factor Tu GTP binding domain LPH41_07785 PF03144 Elongation factor Tu domain 2 LPH41_07790 PF00009 Elongation factor Tu GTP binding domain LPH41_07790 PF03143 Elongation factor Tu C-terminal domain LPH41_07790 PF03144 Elongation factor Tu domain 2 LPH41_07795 PF01435 Peptidase family M48 LPH41_07805 PF00313 'Cold-shock' DNA-binding domain LPH41_07810 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LPH41_07815 PF12848 ABC transporter LPH41_07815 PF16326 ABC transporter C-terminal domain LPH41_07815 PF00005 ABC transporter LPH41_07825 PF00545 ribonuclease LPH41_07830 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LPH41_07830 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LPH41_07840 PF17773 UPF0176 acylphosphatase like domain LPH41_07845 PF00072 Response regulator receiver domain LPH41_07845 PF00196 Bacterial regulatory proteins, luxR family LPH41_07850 PF00575 S1 RNA binding domain LPH41_07850 PF10150 Ribonuclease E/G family LPH41_07850 PF12111 Polyribonucleotide phosphorylase C terminal LPH41_07855 PF00849 RNA pseudouridylate synthase LPH41_07855 PF01479 S4 domain LPH41_07870 PF01329 Pterin 4 alpha carbinolamine dehydratase LPH41_07875 PF01106 NifU-like domain LPH41_07885 PF00037 4Fe-4S binding domain LPH41_07885 PF11953 Domain of unknown function (DUF3470) LPH41_07895 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LPH41_07895 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LPH41_07905 PF00180 Isocitrate/isopropylmalate dehydrogenase LPH41_07910 PF00462 Glutaredoxin LPH41_07915 PF01435 Peptidase family M48 LPH41_07915 PF13181 Tetratricopeptide repeat LPH41_07920 PF00486 Transcriptional regulatory protein, C terminal LPH41_07920 PF00072 Response regulator receiver domain LPH41_07925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH41_07925 PF00512 His Kinase A (phospho-acceptor) domain LPH41_07925 PF11808 Phosphate regulon sensor protein PhoR LPH41_07925 PF00989 PAS fold LPH41_07930 PF13089 Polyphosphate kinase N-terminal domain LPH41_07930 PF02503 Polyphosphate kinase middle domain LPH41_07930 PF13090 Polyphosphate kinase C-terminal domain 2 LPH41_07930 PF17941 Polyphosphate kinase C-terminal domain 1 LPH41_07935 PF02541 Ppx/GppA phosphatase family LPH41_07940 PF12850 Calcineurin-like phosphoesterase superfamily domain LPH41_07945 PF02321 Outer membrane efflux protein LPH41_07965 PF00664 ABC transporter transmembrane region LPH41_07965 PF00005 ABC transporter LPH41_07980 PF00318 Ribosomal protein S2 LPH41_07985 PF00889 Elongation factor TS LPH41_07990 PF00072 Response regulator receiver domain LPH41_08000 PF04551 GcpE protein LPH41_08005 PF01569 PAP2 superfamily LPH41_08010 PF00892 EamA-like transporter family LPH41_08015 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LPH41_08015 PF01565 FAD binding domain LPH41_08020 PF01180 Dihydroorotate dehydrogenase LPH41_08030 PF00005 ABC transporter LPH41_08035 PF01061 ABC-2 type transporter LPH41_08045 PF00152 tRNA synthetases class II (D, K and N) LPH41_08045 PF01336 OB-fold nucleic acid binding domain LPH41_08050 PF01521 Iron-sulphur cluster biosynthesis LPH41_08055 PF01250 Ribosomal protein S6 LPH41_08060 PF01084 Ribosomal protein S18 LPH41_08065 PF01281 Ribosomal protein L9, N-terminal domain LPH41_08065 PF03948 Ribosomal protein L9, C-terminal domain LPH41_08070 PF02463 RecF/RecN/SMC N terminal domain LPH41_08075 PF04354 ZipA, C-terminal FtsZ-binding domain LPH41_08085 PF12826 Helix-hairpin-helix motif LPH41_08085 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LPH41_08085 PF03120 NAD-dependent DNA ligase OB-fold domain LPH41_08085 PF01653 NAD-dependent DNA ligase adenylation domain LPH41_08085 PF00533 BRCA1 C Terminus (BRCT) domain LPH41_08090 PF00583 Acetyltransferase (GNAT) family LPH41_08095 PF00152 tRNA synthetases class II (D, K and N) LPH41_08105 PF01008 Initiation factor 2 subunit family LPH41_08110 PF00521 DNA gyrase/topoisomerase IV, subunit A LPH41_08110 PF03989 DNA gyrase C-terminal domain, beta-propeller LPH41_08125 PF08479 POTRA domain, ShlB-type LPH41_08125 PF17287 POTRA domain LPH41_08125 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB LPH41_08130 PF13018 Extended Signal Peptide of Type V secretion system LPH41_08130 PF13332 Hemagglutinin repeat LPH41_08130 PF05860 haemagglutination activity domain LPH41_08130 PF04829 Pre-toxin domain with VENN motif LPH41_08135 PF13332 Hemagglutinin repeat LPH41_08135 PF05860 haemagglutination activity domain LPH41_08135 PF04829 Pre-toxin domain with VENN motif LPH41_08165 PF03471 Transporter associated domain LPH41_08165 PF00571 CBS domain LPH41_08175 PF02130 Uncharacterized protein family UPF0054 LPH41_08180 PF02562 PhoH-like protein LPH41_08185 PF00919 Uncharacterized protein family UPF0004 LPH41_08185 PF04055 Radical SAM superfamily LPH41_08185 PF01938 TRAM domain LPH41_08190 PF01464 Transglycosylase SLT domain LPH41_08210 PF02798 Glutathione S-transferase, N-terminal domain LPH41_08210 PF00043 Glutathione S-transferase, C-terminal domain LPH41_08215 PF04386 Stringent starvation protein B LPH41_08235 PF07670 Nucleoside recognition LPH41_08235 PF02421 Ferrous iron transport protein B LPH41_08235 PF07664 Ferrous iron transport protein B C terminus LPH41_08245 PF13525 Outer membrane lipoprotein LPH41_08250 PF00849 RNA pseudouridylate synthase LPH41_08250 PF01479 S4 domain LPH41_08255 PF02578 Multi-copper polyphenol oxidoreductase laccase LPH41_08260 PF04134 Protein of unknown function, DUF393 LPH41_08265 PF06039 Malate:quinone oxidoreductase (Mqo) LPH41_08270 PF12848 ABC transporter LPH41_08270 PF00005 ABC transporter LPH41_08275 PF00464 Serine hydroxymethyltransferase LPH41_08285 PF03477 ATP cone domain LPH41_08295 PF01872 RibD C-terminal domain LPH41_08295 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LPH41_08300 PF00677 Lumazine binding domain LPH41_08305 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LPH41_08305 PF00925 GTP cyclohydrolase II LPH41_08310 PF00885 6,7-dimethyl-8-ribityllumazine synthase LPH41_08315 PF01029 NusB family LPH41_08320 PF00586 AIR synthase related protein, N-terminal domain LPH41_08320 PF02769 AIR synthase related protein, C-terminal domain LPH41_08340 PF13638 PIN domain LPH41_08340 PF02562 PhoH-like protein LPH41_08345 PF00578 AhpC/TSA family LPH41_08355 PF00701 Dihydrodipicolinate synthetase family LPH41_08370 PF02151 UvrB/uvrC motif LPH41_08370 PF04851 Type III restriction enzyme, res subunit LPH41_08370 PF00271 Helicase conserved C-terminal domain LPH41_08370 PF17757 UvrB interaction domain LPH41_08370 PF12344 Ultra-violet resistance protein B LPH41_08385 PF02590 Predicted SPOUT methyltransferase LPH41_08390 PF07715 TonB-dependent Receptor Plug Domain LPH41_08390 PF00593 TonB dependent receptor LPH41_08395 PF02600 Disulfide bond formation protein DsbB LPH41_08400 PF00691 OmpA family LPH41_08400 PF05736 OprF membrane domain LPH41_08405 PF02913 FAD linked oxidases, C-terminal domain LPH41_08405 PF01565 FAD binding domain LPH41_08415 PF13291 ACT domain LPH41_08415 PF04607 Region found in RelA / SpoT proteins LPH41_08415 PF02824 TGS domain LPH41_08420 PF01042 Endoribonuclease L-PSP LPH41_08425 PF00271 Helicase conserved C-terminal domain LPH41_08425 PF00270 DEAD/DEAH box helicase LPH41_08425 PF17191 RecG wedge domain LPH41_08430 PF00067 Cytochrome P450 LPH41_08435 PF08019 Phosphoethanolamine transferase EptA/EptB LPH41_08435 PF00884 Sulfatase LPH41_08445 PF11741 AMIN domain LPH41_08445 PF07660 Secretin and TonB N terminus short domain LPH41_08445 PF03958 Bacterial type II/III secretion system short domain LPH41_08445 PF00263 Bacterial type II and III secretion system protein LPH41_08450 PF04351 Pilus assembly protein, PilP LPH41_08455 PF04350 Pilus assembly protein, PilO LPH41_08460 PF05137 Fimbrial assembly protein (PilN) LPH41_08465 PF11104 Type IV pilus assembly protein PilM; LPH41_08470 PF17092 Penicillin-binding protein OB-like domain LPH41_08470 PF00905 Penicillin binding protein transpeptidase domain LPH41_08470 PF00912 Transglycosylase LPH41_08475 PF00248 Aldo/keto reductase family LPH41_08485 PF00691 OmpA family LPH41_08485 PF05736 OprF membrane domain LPH41_08490 PF03796 DnaB-like helicase C terminal domain LPH41_08490 PF00772 DnaB-like helicase N terminal domain LPH41_08520 PF00067 Cytochrome P450 LPH41_08530 PF02581 Thiamine monophosphate synthase LPH41_08535 PF00301 Rubredoxin LPH41_08545 PF10431 C-terminal, D2-small domain, of ClpB protein LPH41_08545 PF02861 Clp amino terminal domain, pathogenicity island component LPH41_08545 PF17871 AAA lid domain LPH41_08545 PF07724 AAA domain (Cdc48 subfamily) LPH41_08545 PF00004 ATPase family associated with various cellular activities (AAA) LPH41_08560 PF00593 TonB dependent receptor LPH41_08560 PF07715 TonB-dependent Receptor Plug Domain LPH41_08565 PF01207 Dihydrouridine synthase (Dus) LPH41_08575 PF00072 Response regulator receiver domain LPH41_08575 PF00486 Transcriptional regulatory protein, C terminal LPH41_08580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH41_08590 PF00438 S-adenosylmethionine synthetase, N-terminal domain LPH41_08590 PF02772 S-adenosylmethionine synthetase, central domain LPH41_08590 PF02773 S-adenosylmethionine synthetase, C-terminal domain LPH41_08615 PF00210 Ferritin-like domain LPH41_08620 PF01627 Hpt domain LPH41_08620 PF00512 His Kinase A (phospho-acceptor) domain LPH41_08620 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LPH41_08620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH41_08620 PF00672 HAMP domain LPH41_08620 PF00072 Response regulator receiver domain LPH41_08625 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LPH41_08625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH41_08625 PF00512 His Kinase A (phospho-acceptor) domain LPH41_08625 PF01627 Hpt domain LPH41_08625 PF00072 Response regulator receiver domain LPH41_08625 PF00672 HAMP domain LPH41_08630 PF00486 Transcriptional regulatory protein, C terminal LPH41_08630 PF00072 Response regulator receiver domain LPH41_08645 PF01521 Iron-sulphur cluster biosynthesis LPH41_08665 PF03741 Integral membrane protein TerC family LPH41_08670 PF17785 PUA-like domain LPH41_08670 PF10672 S-adenosylmethionine-dependent methyltransferase LPH41_08680 PF13520 Amino acid permease LPH41_08695 PF00005 ABC transporter LPH41_08700 PF02646 RmuC family LPH41_08705 PF04333 MlaA lipoprotein LPH41_08715 PF05494 MlaC protein LPH41_08720 PF02470 MlaD protein LPH41_08725 PF02405 Permease MlaE LPH41_08730 PF00005 ABC transporter LPH41_08735 PF17946 RecC C-terminal domain LPH41_08740 PF13361 UvrD-like helicase C-terminal domain LPH41_08740 PF00580 UvrD/REP helicase N-terminal domain LPH41_08740 PF12705 PD-(D/E)XK nuclease superfamily LPH41_08745 PF13538 UvrD-like helicase C-terminal domain LPH41_08750 PF00579 tRNA synthetases class I (W and Y) LPH41_08760 PF10410 DnaB-helicase binding domain of primase LPH41_08760 PF08275 DNA primase catalytic core, N-terminal domain LPH41_08760 PF08278 DNA primase DnaG DnaB-binding LPH41_08760 PF01807 CHC2 zinc finger LPH41_08765 PF03631 Virulence factor BrkB LPH41_08770 PF09424 Yqey-like protein LPH41_08775 PF01165 Ribosomal protein S21 LPH41_08780 PF00814 Glycoprotease family LPH41_08785 PF02152 Dihydroneopterin aldolase LPH41_08790 PF00924 Mechanosensitive ion channel LPH41_08795 PF01915 Glycosyl hydrolase family 3 C-terminal domain LPH41_08795 PF00933 Glycosyl hydrolase family 3 N terminal domain LPH41_08795 PF14310 Fibronectin type III-like domain LPH41_08810 PF00583 Acetyltransferase (GNAT) family LPH41_08820 PF01066 CDP-alcohol phosphatidyltransferase LPH41_08830 PF04073 Aminoacyl-tRNA editing domain LPH41_08830 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LPH41_08830 PF03129 Anticodon binding domain LPH41_08845 PF00072 Response regulator receiver domain LPH41_08850 PF00107 Zinc-binding dehydrogenase LPH41_08850 PF08240 Alcohol dehydrogenase GroES-like domain LPH41_08855 PF12221 Bacterial membrane protein N terminal LPH41_08855 PF01145 SPFH domain / Band 7 family LPH41_08860 PF01145 SPFH domain / Band 7 family LPH41_08870 PF00709 Adenylosuccinate synthetase LPH41_08875 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LPH41_08875 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LPH41_08880 PF00334 Nucleoside diphosphate kinase LPH41_08885 PF04055 Radical SAM superfamily LPH41_08905 PF01011 PQQ enzyme repeat LPH41_08905 PF13360 PQQ-like domain LPH41_08910 PF01926 50S ribosome-binding GTPase LPH41_08910 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LPH41_08915 PF00899 ThiF family LPH41_08925 PF12792 CSS motif domain associated with EAL LPH41_08925 PF00563 EAL domain LPH41_08930 PF11892 Domain of unknown function (DUF3412) LPH41_08930 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases LPH41_08930 PF03641 Possible lysine decarboxylase LPH41_08955 PF05567 Neisseria PilC beta-propeller domain LPH41_08980 PF07687 Peptidase dimerisation domain LPH41_08980 PF01546 Peptidase family M20/M25/M40 LPH41_09025 PF04060 Putative Fe-S cluster LPH41_09035 PF01588 Putative tRNA binding domain LPH41_09035 PF09334 tRNA synthetases class I (M) LPH41_09040 PF07715 TonB-dependent Receptor Plug Domain LPH41_09040 PF00593 TonB dependent receptor LPH41_09045 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LPH41_09050 PF04348 LppC putative lipoprotein LPH41_09055 PF02021 Uncharacterised protein family UPF0102 LPH41_09060 PF03193 RsgA GTPase LPH41_09065 PF00127 Copper binding proteins, plastocyanin/azurin family LPH41_09070 PF00117 Glutamine amidotransferase class-I LPH41_09070 PF00958 GMP synthase C terminal domain LPH41_09070 PF02540 NAD synthase LPH41_09080 PF00902 Sec-independent protein translocase protein (TatC) LPH41_09085 PF02416 mttA/Hcf106 family LPH41_09090 PF02416 mttA/Hcf106 family LPH41_09100 PF00762 Ferrochelatase LPH41_09110 PF04381 Putative exonuclease, RdgC LPH41_09115 PF01171 PP-loop family LPH41_09120 PF07977 FabA-like domain LPH41_09125 PF01431 Peptidase family M13 LPH41_09125 PF05649 Peptidase family M13 LPH41_09130 PF02223 Thymidylate kinase LPH41_09145 PF00551 Formyl transferase LPH41_09150 PF02769 AIR synthase related protein, C-terminal domain LPH41_09150 PF00586 AIR synthase related protein, N-terminal domain LPH41_09160 PF01594 AI-2E family transporter LPH41_09165 PF00308 Bacterial dnaA protein LPH41_09170 PF00483 Nucleotidyl transferase LPH41_09175 PF01636 Phosphotransferase enzyme family LPH41_09185 PF00258 Flavodoxin LPH41_09185 PF00175 Oxidoreductase NAD-binding domain LPH41_09185 PF00667 FAD binding domain LPH41_09190 PF02424 ApbE family LPH41_09210 PF13640 2OG-Fe(II) oxygenase superfamily LPH41_09210 PF18331 PKHD-type hydroxylase C-terminal domain LPH41_09215 PF07715 TonB-dependent Receptor Plug Domain LPH41_09215 PF00593 TonB dependent receptor LPH41_09235 PF00291 Pyridoxal-phosphate dependent enzyme LPH41_09250 PF16363 GDP-mannose 4,6 dehydratase LPH41_09255 PF01370 NAD dependent epimerase/dehydratase family LPH41_09260 PF01370 NAD dependent epimerase/dehydratase family LPH41_09285 PF00118 TCP-1/cpn60 chaperonin family LPH41_09290 PF00166 Chaperonin 10 Kd subunit LPH41_09295 PF03091 CutA1 divalent ion tolerance protein LPH41_09300 PF02683 Cytochrome C biogenesis protein transmembrane region LPH41_09300 PF11412 Disulphide bond corrector protein DsbC LPH41_09320 PF02581 Thiamine monophosphate synthase LPH41_09320 PF08543 Phosphomethylpyrimidine kinase LPH41_09325 PF08501 Shikimate dehydrogenase substrate binding domain LPH41_09325 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LPH41_09325 PF01488 Shikimate / quinate 5-dehydrogenase LPH41_09350 PF00293 NUDIX domain LPH41_09355 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LPH41_09355 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LPH41_09370 PF00730 HhH-GPD superfamily base excision DNA repair protein LPH41_09370 PF00633 Helix-hairpin-helix motif LPH41_09370 PF10576 Iron-sulfur binding domain of endonuclease III LPH41_09395 PF04235 Protein of unknown function (DUF418) LPH41_09400 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LPH41_09405 PF00877 NlpC/P60 family LPH41_09410 PF00877 NlpC/P60 family LPH41_09415 PF00375 Sodium:dicarboxylate symporter family LPH41_09425 PF11734 TilS substrate C-terminal domain LPH41_09425 PF09179 TilS substrate binding domain LPH41_09425 PF01171 PP-loop family LPH41_09430 PF02609 Exonuclease VII small subunit LPH41_09435 PF00348 Polyprenyl synthetase LPH41_09490 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) LPH41_09490 PF06594 Haemolysin-type calcium binding protein related domain LPH41_09500 PF05175 Methyltransferase small domain LPH41_09505 PF01264 Chorismate synthase LPH41_09515 PF02774 Semialdehyde dehydrogenase, dimerisation domain LPH41_09515 PF01118 Semialdehyde dehydrogenase, NAD binding domain LPH41_09525 PF01416 tRNA pseudouridine synthase LPH41_09530 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LPH41_09540 PF00291 Pyridoxal-phosphate dependent enzyme LPH41_09545 PF00290 Tryptophan synthase alpha chain LPH41_09555 PF18073 Rubredoxin metal binding domain LPH41_09560 PF00296 Luciferase-like monooxygenase LPH41_09580 PF09382 RQC domain LPH41_09580 PF00570 HRDC domain LPH41_09580 PF00271 Helicase conserved C-terminal domain LPH41_09580 PF00270 DEAD/DEAH box helicase LPH41_09580 PF16124 RecQ zinc-binding LPH41_09585 PF00210 Ferritin-like domain LPH41_09590 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LPH41_09590 PF04408 Helicase associated domain (HA2) LPH41_09590 PF11898 Domain of unknown function (DUF3418) LPH41_09590 PF00270 DEAD/DEAH box helicase LPH41_09590 PF00271 Helicase conserved C-terminal domain LPH41_09600 PF02347 Glycine cleavage system P-protein LPH41_09605 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LPH41_09610 PF00510 Cytochrome c oxidase subunit III LPH41_09615 PF00115 Cytochrome C and Quinol oxidase polypeptide I LPH41_09620 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LPH41_09620 PF06481 COX Aromatic Rich Motif LPH41_09625 PF00348 Polyprenyl synthetase LPH41_09630 PF00436 Single-strand binding protein family LPH41_09640 PF00082 Subtilase family LPH41_09650 PF04542 Sigma-70 region 2 LPH41_09650 PF08281 Sigma-70, region 4 LPH41_09685 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LPH41_09690 PF00571 CBS domain LPH41_09690 PF03448 MgtE intracellular N domain LPH41_09690 PF01769 Divalent cation transporter LPH41_09695 PF00391 PEP-utilising enzyme, mobile domain LPH41_09695 PF05524 PEP-utilising enzyme, N-terminal LPH41_09695 PF02896 PEP-utilising enzyme, TIM barrel domain LPH41_09700 PF00381 PTS HPr component phosphorylation site LPH41_09710 PF03668 P-loop ATPase protein family LPH41_09715 PF02603 HPr Serine kinase N terminus LPH41_09715 PF07475 HPr Serine kinase C-terminal domain LPH41_09720 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LPH41_09725 PF04552 Sigma-54, DNA binding domain LPH41_09725 PF04963 Sigma-54 factor, core binding domain LPH41_09725 PF00309 Sigma-54 factor, Activator interacting domain (AID) LPH41_09730 PF12399 Branched-chain amino acid ATP-binding cassette transporter LPH41_09730 PF00005 ABC transporter LPH41_09750 PF01380 SIS domain LPH41_09750 PF00571 CBS domain LPH41_09760 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LPH41_09770 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LPH41_09770 PF02769 AIR synthase related protein, C-terminal domain LPH41_09770 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal LPH41_09775 PF13098 Thioredoxin-like domain LPH41_09775 PF10411 Disulfide bond isomerase protein N-terminus LPH41_09780 PF00589 Phage integrase family LPH41_09780 PF02899 Phage integrase, N-terminal SAM-like domain LPH41_09785 PF00520 Ion transport protein LPH41_09785 PF00027 Cyclic nucleotide-binding domain LPH41_09790 PF00202 Aminotransferase class-III LPH41_09800 PF04107 Glutamate-cysteine ligase family 2(GCS2) LPH41_09805 PF01926 50S ribosome-binding GTPase LPH41_09815 PF01323 DSBA-like thioredoxin domain LPH41_09830 PF04356 Protein of unknown function (DUF489) LPH41_09840 PF00293 NUDIX domain LPH41_09845 PF02617 ATP-dependent Clp protease adaptor protein ClpS LPH41_09850 PF17871 AAA lid domain LPH41_09850 PF07724 AAA domain (Cdc48 subfamily) LPH41_09850 PF10431 C-terminal, D2-small domain, of ClpB protein LPH41_09850 PF02861 Clp amino terminal domain, pathogenicity island component LPH41_09850 PF00004 ATPase family associated with various cellular activities (AAA) LPH41_09855 PF01176 Translation initiation factor 1A / IF-1 LPH41_09860 PF03588 Leucyl/phenylalanyl-tRNA protein transferase LPH41_09870 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPH41_09875 PF01580 FtsK/SpoIIIE family LPH41_09875 PF09397 Ftsk gamma domain LPH41_09875 PF17854 FtsK alpha domain LPH41_09875 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LPH41_09890 PF03548 Outer membrane lipoprotein carrier protein LolA LPH41_09895 PF16193 AAA C-terminal domain LPH41_09895 PF12002 MgsA AAA+ ATPase C terminal LPH41_09895 PF00004 ATPase family associated with various cellular activities (AAA) LPH41_09900 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LPH41_09915 PF00512 His Kinase A (phospho-acceptor) domain LPH41_09915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH41_09940 PF02685 Glucokinase LPH41_09950 PF07690 Major Facilitator Superfamily LPH41_09960 PF01380 SIS domain LPH41_09965 PF01979 Amidohydrolase family LPH41_09975 PF01039 Carboxyl transferase domain LPH41_09975 PF17848 Acetyl-coA carboxylase zinc finger domain LPH41_09980 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LPH41_09980 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LPH41_09980 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LPH41_09980 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LPH41_09985 PF01522 Polysaccharide deacetylase LPH41_09990 PF13439 Glycosyltransferase Family 4 LPH41_09990 PF00534 Glycosyl transferases group 1 LPH41_09995 PF00355 Rieske [2Fe-2S] domain LPH41_10000 PF00266 Aminotransferase class-V LPH41_10005 PF01458 Uncharacterized protein family (UPF0051) LPH41_10010 PF00005 ABC transporter LPH41_10015 PF01458 Uncharacterized protein family (UPF0051) LPH41_10020 PF02082 Transcriptional regulator LPH41_10030 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LPH41_10030 PF00326 Prolyl oligopeptidase family LPH41_10040 PF01678 Diaminopimelate epimerase LPH41_10050 PF00589 Phage integrase family LPH41_10050 PF02899 Phage integrase, N-terminal SAM-like domain LPH41_10060 PF00227 Proteasome subunit LPH41_10065 PF10431 C-terminal, D2-small domain, of ClpB protein LPH41_10065 PF07724 AAA domain (Cdc48 subfamily) LPH41_10065 PF00004 ATPase family associated with various cellular activities (AAA) LPH41_10075 PF01209 ubiE/COQ5 methyltransferase family LPH41_10080 PF11838 ERAP1-like C-terminal domain LPH41_10080 PF01433 Peptidase family M1 domain LPH41_10110 PF13369 Transglutaminase-like superfamily LPH41_10135 PF01507 Phosphoadenosine phosphosulfate reductase family LPH41_10140 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LPH41_10140 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LPH41_10145 PF00175 Oxidoreductase NAD-binding domain LPH41_10145 PF00258 Flavodoxin LPH41_10145 PF00667 FAD binding domain LPH41_10150 PF01507 Phosphoadenosine phosphosulfate reductase family LPH41_10155 PF00009 Elongation factor Tu GTP binding domain LPH41_10160 PF01192 RNA polymerase Rpb6 LPH41_10165 PF00625 Guanylate kinase LPH41_10170 PF03755 YicC-like family, N-terminal region LPH41_10170 PF08340 Domain of unknown function (DUF1732) LPH41_10175 PF03725 3' exoribonuclease family, domain 2 LPH41_10175 PF01138 3' exoribonuclease family, domain 1 LPH41_10180 PF01725 Ham1 family LPH41_10185 PF06969 HemN C-terminal domain LPH41_10185 PF04055 Radical SAM superfamily LPH41_10200 PF00561 alpha/beta hydrolase fold LPH41_10210 PF17827 PrmC N-terminal domain LPH41_10210 PF05175 Methyltransferase small domain LPH41_10230 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LPH41_10230 PF00437 Type II/IV secretion system protein LPH41_10235 PF00482 Type II secretion system (T2SS), protein F LPH41_10240 PF08334 Type II secretion system (T2SS), protein G LPH41_10245 PF12019 Type II transport protein GspH LPH41_10250 PF07963 Prokaryotic N-terminal methylation motif LPH41_10260 PF03934 Type II secretion system (T2SS), protein K LPH41_10270 PF03934 Type II secretion system (T2SS), protein K LPH41_10275 PF05137 Fimbrial assembly protein (PilN) LPH41_10280 PF10741 Type II secretion system (T2SS), protein M subtype b LPH41_10290 PF03958 Bacterial type II/III secretion system short domain LPH41_10290 PF00263 Bacterial type II and III secretion system protein LPH41_10295 PF05658 Head domain of trimeric autotransporter adhesin LPH41_10295 PF05662 Coiled stalk of trimeric autotransporter adhesin LPH41_10295 PF03895 YadA-like membrane anchor domain LPH41_10295 PF13018 Extended Signal Peptide of Type V secretion system LPH41_10300 PF00578 AhpC/TSA family LPH41_10300 PF10417 C-terminal domain of 1-Cys peroxiredoxin LPH41_10305 PF13192 Thioredoxin domain LPH41_10305 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPH41_10310 PF03466 LysR substrate binding domain LPH41_10310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH41_10315 PF00814 Glycoprotease family LPH41_10320 PF01197 Ribosomal protein L31 LPH41_10325 PF00285 Citrate synthase, C-terminal domain LPH41_10330 PF00380 Ribosomal protein S9/S16 LPH41_10335 PF00572 Ribosomal protein L13 LPH41_10340 PF03232 Ubiquinone biosynthesis protein COQ7 LPH41_10345 PF02675 S-adenosylmethionine decarboxylase LPH41_10350 PF00325 Bacterial regulatory proteins, crp family LPH41_10350 PF00027 Cyclic nucleotide-binding domain LPH41_10365 PF00899 ThiF family LPH41_10375 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPH41_10375 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LPH41_10385 PF02817 e3 binding domain LPH41_10385 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LPH41_10385 PF00364 Biotin-requiring enzyme LPH41_10390 PF16078 2-oxoglutarate dehydrogenase N-terminus LPH41_10390 PF02779 Transketolase, pyrimidine binding domain LPH41_10390 PF16870 2-oxoglutarate dehydrogenase C-terminal LPH41_10390 PF00676 Dehydrogenase E1 component LPH41_10395 PF08007 Cupin superfamily protein LPH41_10400 PF00206 Lyase LPH41_10400 PF08328 Adenylosuccinate lyase C-terminal LPH41_10405 PF10415 Fumarase C C-terminus LPH41_10405 PF00206 Lyase LPH41_10420 PF00005 ABC transporter LPH41_10430 PF00255 Glutathione peroxidase LPH41_10435 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LPH41_10435 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LPH41_10440 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LPH41_10440 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LPH41_10440 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LPH41_10445 PF04102 SlyX LPH41_10455 PF07690 Major Facilitator Superfamily LPH41_10460 PF00294 pfkB family carbohydrate kinase LPH41_10470 PF01209 ubiE/COQ5 methyltransferase family LPH41_10475 PF00440 Bacterial regulatory proteins, tetR family LPH41_10505 PF00005 ABC transporter LPH41_10510 PF12679 ABC-2 family transporter protein LPH41_10520 PF00266 Aminotransferase class-V LPH41_10525 PF01842 ACT domain LPH41_10525 PF01817 Chorismate mutase type II LPH41_10525 PF00800 Prephenate dehydratase LPH41_10530 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LPH41_10535 PF03544 Gram-negative bacterial TonB protein C-terminal LPH41_10540 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LPH41_10540 PF02403 Seryl-tRNA synthetase N-terminal domain LPH41_10555 PF13614 AAA domain LPH41_10560 PF02195 ParB-like nuclease domain LPH41_10560 PF17762 HTH domain found in ParB protein LPH41_10565 PF01370 NAD dependent epimerase/dehydratase family LPH41_10570 PF00535 Glycosyl transferase family 2 LPH41_10580 PF00501 AMP-binding enzyme LPH41_10590 PF02677 Epoxyqueuosine reductase QueH LPH41_10595 PF01717 Cobalamin-independent synthase, Catalytic domain LPH41_10595 PF08267 Cobalamin-independent synthase, N-terminal domain LPH41_10610 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LPH41_10610 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LPH41_10615 PF00230 Major intrinsic protein LPH41_10620 PF01266 FAD dependent oxidoreductase LPH41_10620 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LPH41_10625 PF03169 OPT oligopeptide transporter protein LPH41_10630 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region LPH41_10630 PF00326 Prolyl oligopeptidase family LPH41_10630 PF07676 WD40-like Beta Propeller Repeat LPH41_10635 PF13360 PQQ-like domain LPH41_10650 PF00106 short chain dehydrogenase LPH41_10655 PF02659 Putative manganese efflux pump LPH41_10660 PF13193 AMP-binding enzyme C-terminal domain LPH41_10660 PF00501 AMP-binding enzyme LPH41_10660 PF16177 Acetyl-coenzyme A synthetase N-terminus LPH41_10670 PF00474 Sodium:solute symporter family LPH41_10680 PF02780 Transketolase, C-terminal domain LPH41_10680 PF02779 Transketolase, pyrimidine binding domain LPH41_10680 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LPH41_10685 PF11967 Recombination protein O N terminal LPH41_10685 PF02565 Recombination protein O C terminal LPH41_10690 PF07650 KH domain LPH41_10690 PF01926 50S ribosome-binding GTPase LPH41_10695 PF00035 Double-stranded RNA binding motif LPH41_10695 PF14622 Ribonuclease-III-like LPH41_10705 PF10502 Signal peptidase, peptidase S26 LPH41_10710 PF06421 GTP-binding protein LepA C-terminus LPH41_10710 PF03144 Elongation factor Tu domain 2 LPH41_10710 PF00009 Elongation factor Tu GTP binding domain LPH41_10710 PF00679 Elongation factor G C-terminus LPH41_10715 PF13180 PDZ domain LPH41_10725 PF08281 Sigma-70, region 4 LPH41_10725 PF04542 Sigma-70 region 2 LPH41_10740 PF00593 TonB dependent receptor LPH41_10740 PF07715 TonB-dependent Receptor Plug Domain LPH41_10745 PF00905 Penicillin binding protein transpeptidase domain LPH41_10745 PF00912 Transglycosylase LPH41_10745 PF06832 Penicillin-Binding Protein C-terminus Family LPH41_10755 PF01556 DnaJ C terminal domain LPH41_10755 PF00226 DnaJ domain LPH41_10760 PF00141 Peroxidase LPH41_10765 PF00768 D-alanyl-D-alanine carboxypeptidase LPH41_10765 PF07943 Penicillin-binding protein 5, C-terminal domain LPH41_10770 PF02622 Uncharacterized ACR, COG1678 LPH41_10775 PF03652 Holliday junction resolvase LPH41_10780 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LPH41_10780 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LPH41_10790 PF03447 Homoserine dehydrogenase, NAD binding domain LPH41_10790 PF00742 Homoserine dehydrogenase LPH41_10790 PF13840 ACT domain LPH41_10790 PF01842 ACT domain LPH41_10790 PF00696 Amino acid kinase family LPH41_10795 PF00288 GHMP kinases N terminal domain LPH41_10795 PF08544 GHMP kinases C terminal LPH41_10800 PF00291 Pyridoxal-phosphate dependent enzyme LPH41_10800 PF14821 Threonine synthase N terminus LPH41_10805 PF03129 Anticodon binding domain LPH41_10805 PF13393 Histidyl-tRNA synthetase LPH41_10820 PF08029 HisG, C-terminal domain LPH41_10820 PF01634 ATP phosphoribosyltransferase LPH41_10825 PF00815 Histidinol dehydrogenase LPH41_10830 PF00155 Aminotransferase class I and II LPH41_10835 PF00475 Imidazoleglycerol-phosphate dehydratase LPH41_10840 PF00117 Glutamine amidotransferase class-I LPH41_10845 PF00977 Histidine biosynthesis protein LPH41_10850 PF00977 Histidine biosynthesis protein LPH41_10855 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LPH41_10855 PF01502 Phosphoribosyl-AMP cyclohydrolase LPH41_10885 PF03079 ARD/ARD' family LPH41_10890 PF00596 Class II Aldolase and Adducin N-terminal domain LPH41_10895 PF13520 Amino acid permease LPH41_10900 PF13520 Amino acid permease LPH41_10905 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LPH41_10905 PF01842 ACT domain LPH41_10905 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LPH41_10910 PF01565 FAD binding domain LPH41_10910 PF02913 FAD linked oxidases, C-terminal domain LPH41_10915 PF01132 Elongation factor P (EF-P) OB domain LPH41_10915 PF08207 Elongation factor P (EF-P) KOW-like domain LPH41_10915 PF09285 Elongation factor P, C-terminal LPH41_10935 PF01810 LysE type translocator LPH41_10955 PF04829 Pre-toxin domain with VENN motif LPH41_10955 PF13332 Hemagglutinin repeat LPH41_10955 PF13018 Extended Signal Peptide of Type V secretion system LPH41_10955 PF05860 haemagglutination activity domain LPH41_11050 PF13018 Extended Signal Peptide of Type V secretion system LPH41_11050 PF13332 Hemagglutinin repeat LPH41_11050 PF05860 haemagglutination activity domain LPH41_11050 PF04829 Pre-toxin domain with VENN motif LPH41_11080 PF13332 Hemagglutinin repeat LPH41_11080 PF04829 Pre-toxin domain with VENN motif LPH41_11080 PF05860 haemagglutination activity domain LPH41_11080 PF15605 Bacterial toxin 28 LPH41_11185 PF05036 Sporulation related domain LPH41_11185 PF03330 Lytic transglycolase LPH41_11190 PF13406 Transglycosylase SLT domain LPH41_11205 PF01467 Cytidylyltransferase-like LPH41_11220 PF13603 Leucyl-tRNA synthetase, Domain 2 LPH41_11220 PF08264 Anticodon-binding domain of tRNA LPH41_11220 PF00133 tRNA synthetases class I (I, L, M and V) LPH41_11230 PF00085 Thioredoxin LPH41_11235 PF00719 Inorganic pyrophosphatase LPH41_11240 PF01161 Phosphatidylethanolamine-binding protein LPH41_11255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH41_11255 PF03466 LysR substrate binding domain LPH41_11260 PF07690 Major Facilitator Superfamily LPH41_11265 PF02129 X-Pro dipeptidyl-peptidase (S15 family) LPH41_11280 PF00575 S1 RNA binding domain LPH41_11280 PF16921 Tex protein YqgF-like domain LPH41_11280 PF17674 HHH domain LPH41_11280 PF09371 Tex-like protein N-terminal domain LPH41_11340 PF00959 Phage lysozyme LPH41_11350 PF17876 Cold shock domain LPH41_11350 PF08461 Ribonuclease R winged-helix domain LPH41_11350 PF08206 Ribonuclease B OB domain LPH41_11350 PF00773 RNB domain LPH41_11350 PF00575 S1 RNA binding domain LPH41_11355 PF00588 SpoU rRNA Methylase family LPH41_11355 PF08032 RNA 2'-O ribose methyltransferase substrate binding LPH41_11360 PF00132 Bacterial transferase hexapeptide (six repeats) LPH41_11365 PF01227 GTP cyclohydrolase I LPH41_11370 PF03895 YadA-like membrane anchor domain LPH41_11370 PF05658 Head domain of trimeric autotransporter adhesin LPH41_11370 PF05662 Coiled stalk of trimeric autotransporter adhesin LPH41_11375 PF03186 CobD/Cbib protein LPH41_11385 PF12805 FUSC-like inner membrane protein yccS LPH41_11405 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LPH41_11405 PF02843 Phosphoribosylglycinamide synthetase, C domain LPH41_11405 PF02844 Phosphoribosylglycinamide synthetase, N domain LPH41_11410 PF01808 AICARFT/IMPCHase bienzyme LPH41_11410 PF02142 MGS-like domain LPH41_11420 PF00588 SpoU rRNA Methylase family LPH41_11430 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LPH41_11430 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LPH41_11440 PF00561 alpha/beta hydrolase fold LPH41_11450 PF03692 Putative zinc- or iron-chelating domain LPH41_11470 PF00795 Carbon-nitrogen hydrolase LPH41_11470 PF02540 NAD synthase LPH41_11475 PF02091 Glycyl-tRNA synthetase alpha subunit LPH41_11480 PF05746 DALR anticodon binding domain LPH41_11480 PF02092 Glycyl-tRNA synthetase beta subunit LPH41_11495 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain LPH41_11495 PF02951 Prokaryotic glutathione synthetase, N-terminal domain LPH41_11500 PF00072 Response regulator receiver domain LPH41_11505 PF01584 CheW-like domain LPH41_11510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LPH41_11510 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LPH41_11515 PF01584 CheW-like domain LPH41_11515 PF02895 Signal transducing histidine kinase, homodimeric domain LPH41_11515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH41_11515 PF01627 Hpt domain LPH41_11515 PF00072 Response regulator receiver domain LPH41_11520 PF00072 Response regulator receiver domain LPH41_11520 PF01339 CheB methylesterase LPH41_11530 PF00156 Phosphoribosyl transferase domain LPH41_11545 PF02875 Mur ligase family, glutamate ligase domain LPH41_11545 PF08245 Mur ligase middle domain LPH41_11550 PF06903 VirK protein LPH41_11555 PF01432 Peptidase family M3 LPH41_11570 PF01625 Peptide methionine sulfoxide reductase LPH41_11580 PF00375 Sodium:dicarboxylate symporter family LPH41_11585 PF02779 Transketolase, pyrimidine binding domain LPH41_11585 PF02780 Transketolase, C-terminal domain LPH41_11585 PF00456 Transketolase, thiamine diphosphate binding domain LPH41_11590 PF02527 rRNA small subunit methyltransferase G LPH41_11595 PF01648 4'-phosphopantetheinyl transferase superfamily LPH41_11620 PF05681 Fumarate hydratase (Fumerase) LPH41_11620 PF05683 Fumarase C-terminus LPH41_11640 PF01336 OB-fold nucleic acid binding domain LPH41_11640 PF02938 GAD domain LPH41_11640 PF00152 tRNA synthetases class II (D, K and N) LPH41_11645 PF06508 Queuosine biosynthesis protein QueC LPH41_11700 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system LPH41_11710 PF00589 Phage integrase family LPH41_11775 PF04221 RelB antitoxin LPH41_11780 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ LPH41_11790 PF00300 Histidine phosphatase superfamily (branch 1) LPH41_11795 PF10459 Peptidase S46 LPH41_11800 PF13667 ThiC-associated domain LPH41_11800 PF01964 Radical SAM ThiC family LPH41_11805 PF00970 Oxidoreductase FAD-binding domain LPH41_11805 PF00175 Oxidoreductase NAD-binding domain LPH41_11810 PF00255 Glutathione peroxidase LPH41_11815 PF00854 POT family LPH41_11820 PF04493 Endonuclease V LPH41_11825 PF00300 Histidine phosphatase superfamily (branch 1) LPH41_11830 PF04055 Radical SAM superfamily LPH41_11840 PF00691 OmpA family LPH41_11845 PF07676 WD40-like Beta Propeller Repeat LPH41_11845 PF04052 TolB amino-terminal domain LPH41_11855 PF02472 Biopolymer transport protein ExbD/TolR LPH41_11860 PF01618 MotA/TolQ/ExbB proton channel family LPH41_11865 PF03061 Thioesterase superfamily LPH41_11870 PF17864 RuvB AAA lid domain LPH41_11870 PF05491 RuvB C-terminal winged helix domain LPH41_11870 PF05496 Holliday junction DNA helicase RuvB P-loop domain LPH41_11875 PF02705 K+ potassium transporter LPH41_11880 PF07499 RuvA, C-terminal domain LPH41_11880 PF01330 RuvA N terminal domain LPH41_11885 PF02075 Crossover junction endodeoxyribonuclease RuvC LPH41_11890 PF01709 Transcriptional regulator LPH41_11900 PF04362 Bacterial Fe(2+) trafficking LPH41_11905 PF00633 Helix-hairpin-helix motif LPH41_11905 PF00730 HhH-GPD superfamily base excision DNA repair protein LPH41_11905 PF14815 NUDIX domain LPH41_11910 PF00448 SRP54-type protein, GTPase domain LPH41_11910 PF02881 SRP54-type protein, helical bundle domain