locus-tag class description LPH50_00015 PF00448 SRP54-type protein, GTPase domain LPH50_00015 PF02881 SRP54-type protein, helical bundle domain LPH50_00020 PF00633 Helix-hairpin-helix motif LPH50_00020 PF00730 HhH-GPD superfamily base excision DNA repair protein LPH50_00020 PF14815 NUDIX domain LPH50_00025 PF04362 Bacterial Fe(2+) trafficking LPH50_00035 PF01709 Transcriptional regulator LPH50_00040 PF02075 Crossover junction endodeoxyribonuclease RuvC LPH50_00045 PF07499 RuvA, C-terminal domain LPH50_00045 PF01330 RuvA N terminal domain LPH50_00050 PF02705 K+ potassium transporter LPH50_00055 PF05496 Holliday junction DNA helicase RuvB P-loop domain LPH50_00055 PF05491 RuvB C-terminal winged helix domain LPH50_00055 PF17864 RuvB AAA lid domain LPH50_00060 PF03061 Thioesterase superfamily LPH50_00065 PF01618 MotA/TolQ/ExbB proton channel family LPH50_00070 PF02472 Biopolymer transport protein ExbD/TolR LPH50_00080 PF07676 WD40-like Beta Propeller Repeat LPH50_00080 PF04052 TolB amino-terminal domain LPH50_00085 PF00691 OmpA family LPH50_00095 PF04055 Radical SAM superfamily LPH50_00100 PF00300 Histidine phosphatase superfamily (branch 1) LPH50_00105 PF04493 Endonuclease V LPH50_00110 PF00854 POT family LPH50_00115 PF00255 Glutathione peroxidase LPH50_00120 PF00175 Oxidoreductase NAD-binding domain LPH50_00120 PF00970 Oxidoreductase FAD-binding domain LPH50_00125 PF13667 ThiC-associated domain LPH50_00125 PF01964 Radical SAM ThiC family LPH50_00130 PF10459 Peptidase S46 LPH50_00135 PF00300 Histidine phosphatase superfamily (branch 1) LPH50_00145 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ LPH50_00150 PF04221 RelB antitoxin LPH50_00225 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system LPH50_00280 PF06508 Queuosine biosynthesis protein QueC LPH50_00285 PF02938 GAD domain LPH50_00285 PF00152 tRNA synthetases class II (D, K and N) LPH50_00285 PF01336 OB-fold nucleic acid binding domain LPH50_00305 PF05683 Fumarase C-terminus LPH50_00305 PF05681 Fumarate hydratase (Fumerase) LPH50_00330 PF01648 4'-phosphopantetheinyl transferase superfamily LPH50_00335 PF02527 rRNA small subunit methyltransferase G LPH50_00340 PF02779 Transketolase, pyrimidine binding domain LPH50_00340 PF02780 Transketolase, C-terminal domain LPH50_00340 PF00456 Transketolase, thiamine diphosphate binding domain LPH50_00345 PF00375 Sodium:dicarboxylate symporter family LPH50_00355 PF01625 Peptide methionine sulfoxide reductase LPH50_00370 PF01432 Peptidase family M3 LPH50_00375 PF06903 VirK protein LPH50_00380 PF02875 Mur ligase family, glutamate ligase domain LPH50_00380 PF08245 Mur ligase middle domain LPH50_00395 PF00156 Phosphoribosyl transferase domain LPH50_00405 PF00072 Response regulator receiver domain LPH50_00405 PF01339 CheB methylesterase LPH50_00410 PF01584 CheW-like domain LPH50_00410 PF02895 Signal transducing histidine kinase, homodimeric domain LPH50_00410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH50_00410 PF01627 Hpt domain LPH50_00410 PF00072 Response regulator receiver domain LPH50_00415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LPH50_00415 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LPH50_00420 PF01584 CheW-like domain LPH50_00425 PF00072 Response regulator receiver domain LPH50_00430 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain LPH50_00430 PF02951 Prokaryotic glutathione synthetase, N-terminal domain LPH50_00445 PF02092 Glycyl-tRNA synthetase beta subunit LPH50_00445 PF05746 DALR anticodon binding domain LPH50_00450 PF02091 Glycyl-tRNA synthetase alpha subunit LPH50_00455 PF00795 Carbon-nitrogen hydrolase LPH50_00455 PF02540 NAD synthase LPH50_00480 PF03692 Putative zinc- or iron-chelating domain LPH50_00495 PF00561 alpha/beta hydrolase fold LPH50_00505 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LPH50_00505 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LPH50_00515 PF00588 SpoU rRNA Methylase family LPH50_00525 PF01808 AICARFT/IMPCHase bienzyme LPH50_00525 PF02142 MGS-like domain LPH50_00530 PF02843 Phosphoribosylglycinamide synthetase, C domain LPH50_00530 PF02844 Phosphoribosylglycinamide synthetase, N domain LPH50_00530 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LPH50_00550 PF12805 FUSC-like inner membrane protein yccS LPH50_00560 PF03186 CobD/Cbib protein LPH50_00565 PF03895 YadA-like membrane anchor domain LPH50_00565 PF05658 Head domain of trimeric autotransporter adhesin LPH50_00565 PF05662 Coiled stalk of trimeric autotransporter adhesin LPH50_00570 PF01227 GTP cyclohydrolase I LPH50_00580 PF00132 Bacterial transferase hexapeptide (six repeats) LPH50_00585 PF00588 SpoU rRNA Methylase family LPH50_00585 PF08032 RNA 2'-O ribose methyltransferase substrate binding LPH50_00590 PF00773 RNB domain LPH50_00590 PF00575 S1 RNA binding domain LPH50_00590 PF17876 Cold shock domain LPH50_00590 PF08461 Ribonuclease R winged-helix domain LPH50_00590 PF08206 Ribonuclease B OB domain LPH50_00600 PF00959 Phage lysozyme LPH50_00670 PF02129 X-Pro dipeptidyl-peptidase (S15 family) LPH50_00675 PF07690 Major Facilitator Superfamily LPH50_00680 PF03466 LysR substrate binding domain LPH50_00680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH50_00695 PF01161 Phosphatidylethanolamine-binding protein LPH50_00700 PF00719 Inorganic pyrophosphatase LPH50_00705 PF00085 Thioredoxin LPH50_00715 PF13603 Leucyl-tRNA synthetase, Domain 2 LPH50_00715 PF00133 tRNA synthetases class I (I, L, M and V) LPH50_00715 PF08264 Anticodon-binding domain of tRNA LPH50_00730 PF01467 Cytidylyltransferase-like LPH50_00745 PF13406 Transglycosylase SLT domain LPH50_00750 PF03330 Lytic transglycolase LPH50_00750 PF05036 Sporulation related domain LPH50_00855 PF13332 Hemagglutinin repeat LPH50_00855 PF05860 haemagglutination activity domain LPH50_00855 PF15605 Bacterial toxin 28 LPH50_00855 PF04829 Pre-toxin domain with VENN motif LPH50_00885 PF04829 Pre-toxin domain with VENN motif LPH50_00885 PF05860 haemagglutination activity domain LPH50_00885 PF13332 Hemagglutinin repeat LPH50_00890 PF05860 haemagglutination activity domain LPH50_00890 PF04829 Pre-toxin domain with VENN motif LPH50_00890 PF13018 Extended Signal Peptide of Type V secretion system LPH50_00890 PF13332 Hemagglutinin repeat LPH50_00985 PF13332 Hemagglutinin repeat LPH50_00985 PF05860 haemagglutination activity domain LPH50_00985 PF15605 Bacterial toxin 28 LPH50_00985 PF04829 Pre-toxin domain with VENN motif LPH50_00985 PF05860 haemagglutination activity domain LPH50_00985 PF13332 Hemagglutinin repeat LPH50_00985 PF15605 Bacterial toxin 28 LPH50_00985 PF04829 Pre-toxin domain with VENN motif LPH50_00990 PF13332 Hemagglutinin repeat LPH50_00990 PF13018 Extended Signal Peptide of Type V secretion system LPH50_00990 PF05860 haemagglutination activity domain LPH50_00990 PF04829 Pre-toxin domain with VENN motif LPH50_01005 PF01810 LysE type translocator LPH50_01025 PF01132 Elongation factor P (EF-P) OB domain LPH50_01025 PF09285 Elongation factor P, C-terminal LPH50_01025 PF08207 Elongation factor P (EF-P) KOW-like domain LPH50_01030 PF01565 FAD binding domain LPH50_01030 PF02913 FAD linked oxidases, C-terminal domain LPH50_01035 PF01842 ACT domain LPH50_01035 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LPH50_01035 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LPH50_01040 PF13520 Amino acid permease LPH50_01045 PF13520 Amino acid permease LPH50_01050 PF00596 Class II Aldolase and Adducin N-terminal domain LPH50_01055 PF03079 ARD/ARD' family LPH50_01085 PF01502 Phosphoribosyl-AMP cyclohydrolase LPH50_01085 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LPH50_01090 PF00977 Histidine biosynthesis protein LPH50_01095 PF00977 Histidine biosynthesis protein LPH50_01100 PF00117 Glutamine amidotransferase class-I LPH50_01105 PF00475 Imidazoleglycerol-phosphate dehydratase LPH50_01110 PF00155 Aminotransferase class I and II LPH50_01115 PF00815 Histidinol dehydrogenase LPH50_01120 PF08029 HisG, C-terminal domain LPH50_01120 PF01634 ATP phosphoribosyltransferase LPH50_01135 PF13393 Histidyl-tRNA synthetase LPH50_01135 PF03129 Anticodon binding domain LPH50_01140 PF14821 Threonine synthase N terminus LPH50_01140 PF00291 Pyridoxal-phosphate dependent enzyme LPH50_01145 PF00288 GHMP kinases N terminal domain LPH50_01145 PF08544 GHMP kinases C terminal LPH50_01150 PF03447 Homoserine dehydrogenase, NAD binding domain LPH50_01150 PF13840 ACT domain LPH50_01150 PF00742 Homoserine dehydrogenase LPH50_01150 PF01842 ACT domain LPH50_01150 PF00696 Amino acid kinase family LPH50_01160 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LPH50_01160 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LPH50_01165 PF03652 Holliday junction resolvase LPH50_01170 PF02622 Uncharacterized ACR, COG1678 LPH50_01175 PF00768 D-alanyl-D-alanine carboxypeptidase LPH50_01175 PF07943 Penicillin-binding protein 5, C-terminal domain LPH50_01180 PF00141 Peroxidase LPH50_01185 PF01556 DnaJ C terminal domain LPH50_01185 PF00226 DnaJ domain LPH50_01195 PF00905 Penicillin binding protein transpeptidase domain LPH50_01195 PF00912 Transglycosylase LPH50_01195 PF06832 Penicillin-Binding Protein C-terminus Family LPH50_01200 PF00593 TonB dependent receptor LPH50_01200 PF07715 TonB-dependent Receptor Plug Domain LPH50_01220 PF04542 Sigma-70 region 2 LPH50_01220 PF08281 Sigma-70, region 4 LPH50_01230 PF13180 PDZ domain LPH50_01235 PF00009 Elongation factor Tu GTP binding domain LPH50_01235 PF03144 Elongation factor Tu domain 2 LPH50_01235 PF06421 GTP-binding protein LepA C-terminus LPH50_01235 PF00679 Elongation factor G C-terminus LPH50_01240 PF10502 Signal peptidase, peptidase S26 LPH50_01250 PF00035 Double-stranded RNA binding motif LPH50_01250 PF14622 Ribonuclease-III-like LPH50_01255 PF01926 50S ribosome-binding GTPase LPH50_01255 PF07650 KH domain LPH50_01260 PF11967 Recombination protein O N terminal LPH50_01260 PF02565 Recombination protein O C terminal LPH50_01265 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LPH50_01265 PF02780 Transketolase, C-terminal domain LPH50_01265 PF02779 Transketolase, pyrimidine binding domain LPH50_01275 PF00474 Sodium:solute symporter family LPH50_01285 PF16177 Acetyl-coenzyme A synthetase N-terminus LPH50_01285 PF00501 AMP-binding enzyme LPH50_01285 PF13193 AMP-binding enzyme C-terminal domain LPH50_01290 PF02659 Putative manganese efflux pump LPH50_01295 PF00106 short chain dehydrogenase LPH50_01310 PF13360 PQQ-like domain LPH50_01315 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region LPH50_01315 PF07676 WD40-like Beta Propeller Repeat LPH50_01315 PF00326 Prolyl oligopeptidase family LPH50_01320 PF03169 OPT oligopeptide transporter protein LPH50_01325 PF01266 FAD dependent oxidoreductase LPH50_01325 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LPH50_01330 PF00230 Major intrinsic protein LPH50_01335 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LPH50_01335 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LPH50_01350 PF08267 Cobalamin-independent synthase, N-terminal domain LPH50_01350 PF01717 Cobalamin-independent synthase, Catalytic domain LPH50_01355 PF02677 Epoxyqueuosine reductase QueH LPH50_01365 PF00501 AMP-binding enzyme LPH50_01375 PF00535 Glycosyl transferase family 2 LPH50_01380 PF01370 NAD dependent epimerase/dehydratase family LPH50_01385 PF02195 ParB-like nuclease domain LPH50_01385 PF17762 HTH domain found in ParB protein LPH50_01390 PF13614 AAA domain LPH50_01405 PF02403 Seryl-tRNA synthetase N-terminal domain LPH50_01405 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LPH50_01410 PF03544 Gram-negative bacterial TonB protein C-terminal LPH50_01415 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LPH50_01420 PF01817 Chorismate mutase type II LPH50_01420 PF00800 Prephenate dehydratase LPH50_01420 PF01842 ACT domain LPH50_01425 PF00266 Aminotransferase class-V LPH50_01435 PF12679 ABC-2 family transporter protein LPH50_01440 PF00005 ABC transporter LPH50_01470 PF00440 Bacterial regulatory proteins, tetR family LPH50_01475 PF01209 ubiE/COQ5 methyltransferase family LPH50_01485 PF00294 pfkB family carbohydrate kinase LPH50_01490 PF07690 Major Facilitator Superfamily LPH50_01500 PF04102 SlyX LPH50_01505 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LPH50_01505 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LPH50_01505 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LPH50_01510 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LPH50_01510 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LPH50_01515 PF00255 Glutathione peroxidase LPH50_01525 PF00005 ABC transporter LPH50_01540 PF00206 Lyase LPH50_01540 PF10415 Fumarase C C-terminus LPH50_01545 PF08328 Adenylosuccinate lyase C-terminal LPH50_01545 PF00206 Lyase LPH50_01550 PF08007 Cupin superfamily protein LPH50_01555 PF16078 2-oxoglutarate dehydrogenase N-terminus LPH50_01555 PF00676 Dehydrogenase E1 component LPH50_01555 PF16870 2-oxoglutarate dehydrogenase C-terminal LPH50_01555 PF02779 Transketolase, pyrimidine binding domain LPH50_01560 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LPH50_01560 PF00364 Biotin-requiring enzyme LPH50_01560 PF02817 e3 binding domain LPH50_01565 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LPH50_01565 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPH50_01575 PF00899 ThiF family LPH50_01590 PF00325 Bacterial regulatory proteins, crp family LPH50_01590 PF00027 Cyclic nucleotide-binding domain LPH50_01595 PF02675 S-adenosylmethionine decarboxylase LPH50_01600 PF03232 Ubiquinone biosynthesis protein COQ7 LPH50_01605 PF00572 Ribosomal protein L13 LPH50_01610 PF00380 Ribosomal protein S9/S16 LPH50_01615 PF00285 Citrate synthase, C-terminal domain LPH50_01620 PF01197 Ribosomal protein L31 LPH50_01625 PF00814 Glycoprotease family LPH50_01630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH50_01630 PF03466 LysR substrate binding domain LPH50_01635 PF13192 Thioredoxin domain LPH50_01635 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPH50_01640 PF10417 C-terminal domain of 1-Cys peroxiredoxin LPH50_01640 PF00578 AhpC/TSA family LPH50_01645 PF05658 Head domain of trimeric autotransporter adhesin LPH50_01645 PF03895 YadA-like membrane anchor domain LPH50_01645 PF05662 Coiled stalk of trimeric autotransporter adhesin LPH50_01645 PF13018 Extended Signal Peptide of Type V secretion system LPH50_01650 PF03958 Bacterial type II/III secretion system short domain LPH50_01650 PF00263 Bacterial type II and III secretion system protein LPH50_01660 PF10741 Type II secretion system (T2SS), protein M subtype b LPH50_01665 PF05137 Fimbrial assembly protein (PilN) LPH50_01670 PF03934 Type II secretion system (T2SS), protein K LPH50_01680 PF03934 Type II secretion system (T2SS), protein K LPH50_01690 PF07963 Prokaryotic N-terminal methylation motif LPH50_01695 PF12019 Type II transport protein GspH LPH50_01700 PF08334 Type II secretion system (T2SS), protein G LPH50_01705 PF00482 Type II secretion system (T2SS), protein F LPH50_01710 PF00437 Type II/IV secretion system protein LPH50_01710 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LPH50_01730 PF17827 PrmC N-terminal domain LPH50_01730 PF05175 Methyltransferase small domain LPH50_01740 PF00561 alpha/beta hydrolase fold LPH50_01755 PF04055 Radical SAM superfamily LPH50_01755 PF06969 HemN C-terminal domain LPH50_01760 PF01725 Ham1 family LPH50_01765 PF03725 3' exoribonuclease family, domain 2 LPH50_01765 PF01138 3' exoribonuclease family, domain 1 LPH50_01770 PF03755 YicC-like family, N-terminal region LPH50_01770 PF08340 Domain of unknown function (DUF1732) LPH50_01775 PF00625 Guanylate kinase LPH50_01780 PF01192 RNA polymerase Rpb6 LPH50_01785 PF00009 Elongation factor Tu GTP binding domain LPH50_01790 PF01507 Phosphoadenosine phosphosulfate reductase family LPH50_01795 PF00258 Flavodoxin LPH50_01795 PF00175 Oxidoreductase NAD-binding domain LPH50_01795 PF00667 FAD binding domain LPH50_01800 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LPH50_01800 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LPH50_01805 PF01507 Phosphoadenosine phosphosulfate reductase family LPH50_01830 PF13369 Transglutaminase-like superfamily LPH50_01865 PF11838 ERAP1-like C-terminal domain LPH50_01865 PF01433 Peptidase family M1 domain LPH50_01870 PF01209 ubiE/COQ5 methyltransferase family LPH50_01880 PF00004 ATPase family associated with various cellular activities (AAA) LPH50_01880 PF07724 AAA domain (Cdc48 subfamily) LPH50_01880 PF10431 C-terminal, D2-small domain, of ClpB protein LPH50_01885 PF00227 Proteasome subunit LPH50_01895 PF02899 Phage integrase, N-terminal SAM-like domain LPH50_01895 PF00589 Phage integrase family LPH50_01905 PF01678 Diaminopimelate epimerase LPH50_01915 PF00326 Prolyl oligopeptidase family LPH50_01915 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LPH50_01925 PF02082 Transcriptional regulator LPH50_01930 PF01458 Uncharacterized protein family (UPF0051) LPH50_01935 PF00005 ABC transporter LPH50_01940 PF01458 Uncharacterized protein family (UPF0051) LPH50_01945 PF00266 Aminotransferase class-V LPH50_01950 PF00355 Rieske [2Fe-2S] domain LPH50_01955 PF00534 Glycosyl transferases group 1 LPH50_01955 PF13439 Glycosyltransferase Family 4 LPH50_01960 PF01522 Polysaccharide deacetylase LPH50_01965 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LPH50_01965 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LPH50_01965 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LPH50_01965 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LPH50_01970 PF01039 Carboxyl transferase domain LPH50_01970 PF17848 Acetyl-coA carboxylase zinc finger domain LPH50_01990 PF01979 Amidohydrolase family LPH50_01995 PF01380 SIS domain LPH50_02005 PF07690 Major Facilitator Superfamily LPH50_02015 PF02685 Glucokinase LPH50_02040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH50_02040 PF00512 His Kinase A (phospho-acceptor) domain LPH50_02055 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LPH50_02060 PF00004 ATPase family associated with various cellular activities (AAA) LPH50_02060 PF16193 AAA C-terminal domain LPH50_02060 PF12002 MgsA AAA+ ATPase C terminal LPH50_02065 PF03548 Outer membrane lipoprotein carrier protein LolA LPH50_02080 PF17854 FtsK alpha domain LPH50_02080 PF09397 Ftsk gamma domain LPH50_02080 PF01580 FtsK/SpoIIIE family LPH50_02080 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LPH50_02085 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPH50_02095 PF03588 Leucyl/phenylalanyl-tRNA protein transferase LPH50_02100 PF01176 Translation initiation factor 1A / IF-1 LPH50_02105 PF00004 ATPase family associated with various cellular activities (AAA) LPH50_02105 PF07724 AAA domain (Cdc48 subfamily) LPH50_02105 PF17871 AAA lid domain LPH50_02105 PF02861 Clp amino terminal domain, pathogenicity island component LPH50_02105 PF10431 C-terminal, D2-small domain, of ClpB protein LPH50_02110 PF02617 ATP-dependent Clp protease adaptor protein ClpS LPH50_02115 PF00293 NUDIX domain LPH50_02125 PF04356 Protein of unknown function (DUF489) LPH50_02140 PF01323 DSBA-like thioredoxin domain LPH50_02150 PF01926 50S ribosome-binding GTPase LPH50_02155 PF04107 Glutamate-cysteine ligase family 2(GCS2) LPH50_02165 PF00202 Aminotransferase class-III LPH50_02170 PF00027 Cyclic nucleotide-binding domain LPH50_02170 PF00520 Ion transport protein LPH50_02175 PF02899 Phage integrase, N-terminal SAM-like domain LPH50_02175 PF00589 Phage integrase family LPH50_02180 PF13098 Thioredoxin-like domain LPH50_02180 PF10411 Disulfide bond isomerase protein N-terminus LPH50_02185 PF02769 AIR synthase related protein, C-terminal domain LPH50_02185 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal LPH50_02185 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LPH50_02195 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LPH50_02205 PF01380 SIS domain LPH50_02205 PF00571 CBS domain LPH50_02225 PF12399 Branched-chain amino acid ATP-binding cassette transporter LPH50_02225 PF00005 ABC transporter LPH50_02230 PF04963 Sigma-54 factor, core binding domain LPH50_02230 PF00309 Sigma-54 factor, Activator interacting domain (AID) LPH50_02230 PF04552 Sigma-54, DNA binding domain LPH50_02235 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LPH50_02240 PF02603 HPr Serine kinase N terminus LPH50_02240 PF07475 HPr Serine kinase C-terminal domain LPH50_02245 PF03668 P-loop ATPase protein family LPH50_02255 PF00381 PTS HPr component phosphorylation site LPH50_02260 PF02896 PEP-utilising enzyme, TIM barrel domain LPH50_02260 PF00391 PEP-utilising enzyme, mobile domain LPH50_02260 PF05524 PEP-utilising enzyme, N-terminal LPH50_02265 PF03448 MgtE intracellular N domain LPH50_02265 PF01769 Divalent cation transporter LPH50_02265 PF00571 CBS domain LPH50_02270 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LPH50_02305 PF08281 Sigma-70, region 4 LPH50_02305 PF04542 Sigma-70 region 2 LPH50_02315 PF00082 Subtilase family LPH50_02320 PF00436 Single-strand binding protein family LPH50_02325 PF00348 Polyprenyl synthetase LPH50_02330 PF06481 COX Aromatic Rich Motif LPH50_02330 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LPH50_02335 PF00115 Cytochrome C and Quinol oxidase polypeptide I LPH50_02340 PF00510 Cytochrome c oxidase subunit III LPH50_02345 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LPH50_02350 PF02347 Glycine cleavage system P-protein LPH50_02360 PF04408 Helicase associated domain (HA2) LPH50_02360 PF00270 DEAD/DEAH box helicase LPH50_02360 PF11898 Domain of unknown function (DUF3418) LPH50_02360 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LPH50_02360 PF00271 Helicase conserved C-terminal domain LPH50_02365 PF00210 Ferritin-like domain LPH50_02370 PF00270 DEAD/DEAH box helicase LPH50_02370 PF00271 Helicase conserved C-terminal domain LPH50_02370 PF00570 HRDC domain LPH50_02370 PF16124 RecQ zinc-binding LPH50_02370 PF09382 RQC domain LPH50_02390 PF00296 Luciferase-like monooxygenase LPH50_02395 PF18073 Rubredoxin metal binding domain LPH50_02405 PF00290 Tryptophan synthase alpha chain LPH50_02410 PF00291 Pyridoxal-phosphate dependent enzyme LPH50_02415 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LPH50_02420 PF01416 tRNA pseudouridine synthase LPH50_02430 PF01118 Semialdehyde dehydrogenase, NAD binding domain LPH50_02430 PF02774 Semialdehyde dehydrogenase, dimerisation domain LPH50_02440 PF01264 Chorismate synthase LPH50_02445 PF05175 Methyltransferase small domain LPH50_02460 PF06594 Haemolysin-type calcium binding protein related domain LPH50_02460 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) LPH50_02515 PF00348 Polyprenyl synthetase LPH50_02520 PF02609 Exonuclease VII small subunit LPH50_02525 PF11734 TilS substrate C-terminal domain LPH50_02525 PF01171 PP-loop family LPH50_02525 PF09179 TilS substrate binding domain LPH50_02535 PF00375 Sodium:dicarboxylate symporter family LPH50_02540 PF00877 NlpC/P60 family LPH50_02545 PF00877 NlpC/P60 family LPH50_02550 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LPH50_02555 PF04235 Protein of unknown function (DUF418) LPH50_02585 PF10576 Iron-sulfur binding domain of endonuclease III LPH50_02585 PF00633 Helix-hairpin-helix motif LPH50_02585 PF00730 HhH-GPD superfamily base excision DNA repair protein LPH50_02600 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LPH50_02600 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LPH50_02605 PF00293 NUDIX domain LPH50_02630 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LPH50_02630 PF01488 Shikimate / quinate 5-dehydrogenase LPH50_02630 PF08501 Shikimate dehydrogenase substrate binding domain LPH50_02635 PF08543 Phosphomethylpyrimidine kinase LPH50_02635 PF02581 Thiamine monophosphate synthase LPH50_02650 PF02683 Cytochrome C biogenesis protein transmembrane region LPH50_02650 PF11412 Disulphide bond corrector protein DsbC LPH50_02655 PF03091 CutA1 divalent ion tolerance protein LPH50_02660 PF00166 Chaperonin 10 Kd subunit LPH50_02665 PF00118 TCP-1/cpn60 chaperonin family LPH50_02690 PF01370 NAD dependent epimerase/dehydratase family LPH50_02695 PF01370 NAD dependent epimerase/dehydratase family LPH50_02700 PF16363 GDP-mannose 4,6 dehydratase LPH50_02715 PF00291 Pyridoxal-phosphate dependent enzyme LPH50_02735 PF00593 TonB dependent receptor LPH50_02735 PF07715 TonB-dependent Receptor Plug Domain LPH50_02740 PF18331 PKHD-type hydroxylase C-terminal domain LPH50_02740 PF13640 2OG-Fe(II) oxygenase superfamily LPH50_02760 PF02424 ApbE family LPH50_02765 PF00175 Oxidoreductase NAD-binding domain LPH50_02765 PF00667 FAD binding domain LPH50_02765 PF00258 Flavodoxin LPH50_02775 PF01636 Phosphotransferase enzyme family LPH50_02780 PF00483 Nucleotidyl transferase LPH50_02785 PF00308 Bacterial dnaA protein LPH50_02790 PF01594 AI-2E family transporter LPH50_02800 PF02769 AIR synthase related protein, C-terminal domain LPH50_02800 PF00586 AIR synthase related protein, N-terminal domain LPH50_02805 PF00551 Formyl transferase LPH50_02820 PF02223 Thymidylate kinase LPH50_02825 PF05649 Peptidase family M13 LPH50_02825 PF01431 Peptidase family M13 LPH50_02830 PF07977 FabA-like domain LPH50_02835 PF01171 PP-loop family LPH50_02840 PF04381 Putative exonuclease, RdgC LPH50_02850 PF00762 Ferrochelatase LPH50_02860 PF02416 mttA/Hcf106 family LPH50_02865 PF02416 mttA/Hcf106 family LPH50_02870 PF00902 Sec-independent protein translocase protein (TatC) LPH50_02880 PF00117 Glutamine amidotransferase class-I LPH50_02880 PF00958 GMP synthase C terminal domain LPH50_02880 PF02540 NAD synthase LPH50_02885 PF00127 Copper binding proteins, plastocyanin/azurin family LPH50_02890 PF03193 RsgA GTPase LPH50_02895 PF02021 Uncharacterised protein family UPF0102 LPH50_02900 PF04348 LppC putative lipoprotein LPH50_02905 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LPH50_02910 PF07715 TonB-dependent Receptor Plug Domain LPH50_02910 PF00593 TonB dependent receptor LPH50_02915 PF09334 tRNA synthetases class I (M) LPH50_02915 PF01588 Putative tRNA binding domain LPH50_02925 PF04060 Putative Fe-S cluster LPH50_02970 PF07687 Peptidase dimerisation domain LPH50_02970 PF01546 Peptidase family M20/M25/M40 LPH50_02995 PF05567 Neisseria PilC beta-propeller domain LPH50_03020 PF11892 Domain of unknown function (DUF3412) LPH50_03020 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases LPH50_03020 PF03641 Possible lysine decarboxylase LPH50_03025 PF00563 EAL domain LPH50_03025 PF12792 CSS motif domain associated with EAL LPH50_03035 PF00899 ThiF family LPH50_03040 PF01926 50S ribosome-binding GTPase LPH50_03040 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LPH50_03045 PF13360 PQQ-like domain LPH50_03045 PF01011 PQQ enzyme repeat LPH50_03065 PF04055 Radical SAM superfamily LPH50_03070 PF00334 Nucleoside diphosphate kinase LPH50_03075 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LPH50_03075 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LPH50_03080 PF00709 Adenylosuccinate synthetase LPH50_03090 PF01145 SPFH domain / Band 7 family LPH50_03095 PF01145 SPFH domain / Band 7 family LPH50_03095 PF12221 Bacterial membrane protein N terminal LPH50_03100 PF08240 Alcohol dehydrogenase GroES-like domain LPH50_03100 PF00107 Zinc-binding dehydrogenase LPH50_03105 PF00072 Response regulator receiver domain LPH50_03120 PF03129 Anticodon binding domain LPH50_03120 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LPH50_03120 PF04073 Aminoacyl-tRNA editing domain LPH50_03130 PF01066 CDP-alcohol phosphatidyltransferase LPH50_03140 PF00583 Acetyltransferase (GNAT) family LPH50_03155 PF00933 Glycosyl hydrolase family 3 N terminal domain LPH50_03155 PF01915 Glycosyl hydrolase family 3 C-terminal domain LPH50_03155 PF14310 Fibronectin type III-like domain LPH50_03160 PF00924 Mechanosensitive ion channel LPH50_03165 PF02152 Dihydroneopterin aldolase LPH50_03170 PF00814 Glycoprotease family LPH50_03175 PF01165 Ribosomal protein S21 LPH50_03180 PF09424 Yqey-like protein LPH50_03185 PF03631 Virulence factor BrkB LPH50_03190 PF08278 DNA primase DnaG DnaB-binding LPH50_03190 PF08275 DNA primase catalytic core, N-terminal domain LPH50_03190 PF01807 CHC2 zinc finger LPH50_03190 PF10410 DnaB-helicase binding domain of primase LPH50_03200 PF00579 tRNA synthetases class I (W and Y) LPH50_03205 PF13538 UvrD-like helicase C-terminal domain LPH50_03210 PF12705 PD-(D/E)XK nuclease superfamily LPH50_03210 PF00580 UvrD/REP helicase N-terminal domain LPH50_03210 PF13361 UvrD-like helicase C-terminal domain LPH50_03215 PF17946 RecC C-terminal domain LPH50_03220 PF00005 ABC transporter LPH50_03225 PF02405 Permease MlaE LPH50_03230 PF02470 MlaD protein LPH50_03235 PF05494 MlaC protein LPH50_03245 PF04333 MlaA lipoprotein LPH50_03250 PF02646 RmuC family LPH50_03255 PF00005 ABC transporter LPH50_03270 PF13520 Amino acid permease LPH50_03280 PF17785 PUA-like domain LPH50_03280 PF10672 S-adenosylmethionine-dependent methyltransferase LPH50_03285 PF03741 Integral membrane protein TerC family LPH50_03300 PF01521 Iron-sulphur cluster biosynthesis LPH50_03315 PF00072 Response regulator receiver domain LPH50_03315 PF00486 Transcriptional regulatory protein, C terminal LPH50_03320 PF00672 HAMP domain LPH50_03320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH50_03320 PF00512 His Kinase A (phospho-acceptor) domain LPH50_03320 PF01627 Hpt domain LPH50_03320 PF00072 Response regulator receiver domain LPH50_03320 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LPH50_03325 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LPH50_03325 PF01627 Hpt domain LPH50_03325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH50_03325 PF00672 HAMP domain LPH50_03325 PF00512 His Kinase A (phospho-acceptor) domain LPH50_03325 PF00072 Response regulator receiver domain LPH50_03330 PF00210 Ferritin-like domain LPH50_03355 PF02773 S-adenosylmethionine synthetase, C-terminal domain LPH50_03355 PF02772 S-adenosylmethionine synthetase, central domain LPH50_03355 PF00438 S-adenosylmethionine synthetase, N-terminal domain LPH50_03365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH50_03370 PF00486 Transcriptional regulatory protein, C terminal LPH50_03370 PF00072 Response regulator receiver domain LPH50_03380 PF01207 Dihydrouridine synthase (Dus) LPH50_03385 PF00593 TonB dependent receptor LPH50_03385 PF07715 TonB-dependent Receptor Plug Domain LPH50_03400 PF07724 AAA domain (Cdc48 subfamily) LPH50_03400 PF17871 AAA lid domain LPH50_03400 PF00004 ATPase family associated with various cellular activities (AAA) LPH50_03400 PF02861 Clp amino terminal domain, pathogenicity island component LPH50_03400 PF10431 C-terminal, D2-small domain, of ClpB protein LPH50_03410 PF00301 Rubredoxin LPH50_03415 PF02581 Thiamine monophosphate synthase LPH50_03435 PF00067 Cytochrome P450 LPH50_03465 PF03796 DnaB-like helicase C terminal domain LPH50_03465 PF00772 DnaB-like helicase N terminal domain LPH50_03470 PF00691 OmpA family LPH50_03470 PF05736 OprF membrane domain LPH50_03480 PF00248 Aldo/keto reductase family LPH50_03485 PF00905 Penicillin binding protein transpeptidase domain LPH50_03485 PF00912 Transglycosylase LPH50_03485 PF17092 Penicillin-binding protein OB-like domain LPH50_03490 PF11104 Type IV pilus assembly protein PilM; LPH50_03495 PF05137 Fimbrial assembly protein (PilN) LPH50_03500 PF04350 Pilus assembly protein, PilO LPH50_03505 PF04351 Pilus assembly protein, PilP LPH50_03510 PF11741 AMIN domain LPH50_03510 PF00263 Bacterial type II and III secretion system protein LPH50_03510 PF03958 Bacterial type II/III secretion system short domain LPH50_03510 PF07660 Secretin and TonB N terminus short domain LPH50_03520 PF00884 Sulfatase LPH50_03520 PF08019 Phosphoethanolamine transferase EptA/EptB LPH50_03525 PF00067 Cytochrome P450 LPH50_03530 PF00270 DEAD/DEAH box helicase LPH50_03530 PF00271 Helicase conserved C-terminal domain LPH50_03530 PF17191 RecG wedge domain LPH50_03535 PF01042 Endoribonuclease L-PSP LPH50_03540 PF13291 ACT domain LPH50_03540 PF04607 Region found in RelA / SpoT proteins LPH50_03540 PF02824 TGS domain LPH50_03550 PF01565 FAD binding domain LPH50_03550 PF02913 FAD linked oxidases, C-terminal domain LPH50_03555 PF05736 OprF membrane domain LPH50_03555 PF00691 OmpA family LPH50_03560 PF02600 Disulfide bond formation protein DsbB LPH50_03565 PF07715 TonB-dependent Receptor Plug Domain LPH50_03565 PF00593 TonB dependent receptor LPH50_03570 PF02590 Predicted SPOUT methyltransferase LPH50_03585 PF04851 Type III restriction enzyme, res subunit LPH50_03585 PF02151 UvrB/uvrC motif LPH50_03585 PF12344 Ultra-violet resistance protein B LPH50_03585 PF17757 UvrB interaction domain LPH50_03585 PF00271 Helicase conserved C-terminal domain LPH50_03600 PF00701 Dihydrodipicolinate synthetase family LPH50_03610 PF00578 AhpC/TSA family LPH50_03615 PF13638 PIN domain LPH50_03615 PF02562 PhoH-like protein LPH50_03635 PF02769 AIR synthase related protein, C-terminal domain LPH50_03635 PF00586 AIR synthase related protein, N-terminal domain LPH50_03640 PF01029 NusB family LPH50_03645 PF00885 6,7-dimethyl-8-ribityllumazine synthase LPH50_03650 PF00925 GTP cyclohydrolase II LPH50_03650 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LPH50_03655 PF00677 Lumazine binding domain LPH50_03660 PF01872 RibD C-terminal domain LPH50_03660 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LPH50_03670 PF03477 ATP cone domain LPH50_03680 PF00464 Serine hydroxymethyltransferase LPH50_03685 PF12848 ABC transporter LPH50_03685 PF00005 ABC transporter LPH50_03690 PF06039 Malate:quinone oxidoreductase (Mqo) LPH50_03695 PF04134 Protein of unknown function, DUF393 LPH50_03700 PF02578 Multi-copper polyphenol oxidoreductase laccase LPH50_03705 PF01479 S4 domain LPH50_03705 PF00849 RNA pseudouridylate synthase LPH50_03710 PF13525 Outer membrane lipoprotein LPH50_03720 PF07670 Nucleoside recognition LPH50_03720 PF02421 Ferrous iron transport protein B LPH50_03720 PF07664 Ferrous iron transport protein B C terminus LPH50_03735 PF04386 Stringent starvation protein B LPH50_03740 PF02798 Glutathione S-transferase, N-terminal domain LPH50_03740 PF00043 Glutathione S-transferase, C-terminal domain LPH50_03760 PF01464 Transglycosylase SLT domain LPH50_03765 PF00919 Uncharacterized protein family UPF0004 LPH50_03765 PF01938 TRAM domain LPH50_03765 PF04055 Radical SAM superfamily LPH50_03770 PF02562 PhoH-like protein LPH50_03775 PF02130 Uncharacterized protein family UPF0054 LPH50_03785 PF03471 Transporter associated domain LPH50_03785 PF00571 CBS domain LPH50_03815 PF13332 Hemagglutinin repeat LPH50_03815 PF05860 haemagglutination activity domain LPH50_03815 PF04829 Pre-toxin domain with VENN motif LPH50_03820 PF04829 Pre-toxin domain with VENN motif LPH50_03820 PF13018 Extended Signal Peptide of Type V secretion system LPH50_03820 PF13332 Hemagglutinin repeat LPH50_03820 PF05860 haemagglutination activity domain LPH50_03825 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB LPH50_03825 PF08479 POTRA domain, ShlB-type LPH50_03825 PF17287 POTRA domain LPH50_03835 PF00521 DNA gyrase/topoisomerase IV, subunit A LPH50_03835 PF03989 DNA gyrase C-terminal domain, beta-propeller LPH50_03840 PF01008 Initiation factor 2 subunit family LPH50_03850 PF00152 tRNA synthetases class II (D, K and N) LPH50_03855 PF00583 Acetyltransferase (GNAT) family LPH50_03860 PF00533 BRCA1 C Terminus (BRCT) domain LPH50_03860 PF01653 NAD-dependent DNA ligase adenylation domain LPH50_03860 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LPH50_03860 PF12826 Helix-hairpin-helix motif LPH50_03860 PF03120 NAD-dependent DNA ligase OB-fold domain LPH50_03870 PF04354 ZipA, C-terminal FtsZ-binding domain LPH50_03875 PF02463 RecF/RecN/SMC N terminal domain LPH50_03880 PF01281 Ribosomal protein L9, N-terminal domain LPH50_03880 PF03948 Ribosomal protein L9, C-terminal domain LPH50_03885 PF01084 Ribosomal protein S18 LPH50_03890 PF01250 Ribosomal protein S6 LPH50_03895 PF01521 Iron-sulphur cluster biosynthesis LPH50_03900 PF00152 tRNA synthetases class II (D, K and N) LPH50_03900 PF01336 OB-fold nucleic acid binding domain LPH50_03905 PF01061 ABC-2 type transporter LPH50_03910 PF00005 ABC transporter LPH50_03920 PF01180 Dihydroorotate dehydrogenase LPH50_03925 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LPH50_03925 PF01565 FAD binding domain LPH50_03930 PF00892 EamA-like transporter family LPH50_03935 PF01569 PAP2 superfamily LPH50_03940 PF04551 GcpE protein LPH50_03950 PF00072 Response regulator receiver domain LPH50_03955 PF00889 Elongation factor TS LPH50_03960 PF00318 Ribosomal protein S2 LPH50_03975 PF00664 ABC transporter transmembrane region LPH50_03975 PF00005 ABC transporter LPH50_03995 PF02321 Outer membrane efflux protein LPH50_04000 PF12850 Calcineurin-like phosphoesterase superfamily domain LPH50_04005 PF02541 Ppx/GppA phosphatase family LPH50_04010 PF02503 Polyphosphate kinase middle domain LPH50_04010 PF13090 Polyphosphate kinase C-terminal domain 2 LPH50_04010 PF17941 Polyphosphate kinase C-terminal domain 1 LPH50_04010 PF13089 Polyphosphate kinase N-terminal domain LPH50_04015 PF00512 His Kinase A (phospho-acceptor) domain LPH50_04015 PF00989 PAS fold LPH50_04015 PF11808 Phosphate regulon sensor protein PhoR LPH50_04015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH50_04020 PF00486 Transcriptional regulatory protein, C terminal LPH50_04020 PF00072 Response regulator receiver domain LPH50_04025 PF01435 Peptidase family M48 LPH50_04025 PF13181 Tetratricopeptide repeat LPH50_04030 PF00462 Glutaredoxin LPH50_04035 PF00180 Isocitrate/isopropylmalate dehydrogenase LPH50_04045 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LPH50_04045 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LPH50_04055 PF00037 4Fe-4S binding domain LPH50_04055 PF11953 Domain of unknown function (DUF3470) LPH50_04065 PF01106 NifU-like domain LPH50_04070 PF01329 Pterin 4 alpha carbinolamine dehydratase LPH50_04085 PF01479 S4 domain LPH50_04085 PF00849 RNA pseudouridylate synthase LPH50_04090 PF12111 Polyribonucleotide phosphorylase C terminal LPH50_04090 PF00575 S1 RNA binding domain LPH50_04090 PF10150 Ribonuclease E/G family LPH50_04095 PF00196 Bacterial regulatory proteins, luxR family LPH50_04095 PF00072 Response regulator receiver domain LPH50_04100 PF17773 UPF0176 acylphosphatase like domain LPH50_04110 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LPH50_04110 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LPH50_04115 PF00545 ribonuclease LPH50_04125 PF00005 ABC transporter LPH50_04125 PF16326 ABC transporter C-terminal domain LPH50_04125 PF12848 ABC transporter LPH50_04130 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LPH50_04135 PF00313 'Cold-shock' DNA-binding domain LPH50_04145 PF01435 Peptidase family M48 LPH50_04150 PF03144 Elongation factor Tu domain 2 LPH50_04150 PF03143 Elongation factor Tu C-terminal domain LPH50_04150 PF00009 Elongation factor Tu GTP binding domain LPH50_04155 PF00679 Elongation factor G C-terminus LPH50_04155 PF14492 Elongation Factor G, domain II LPH50_04155 PF00009 Elongation factor Tu GTP binding domain LPH50_04155 PF03144 Elongation factor Tu domain 2 LPH50_04155 PF03764 Elongation factor G, domain IV LPH50_04160 PF00177 Ribosomal protein S7p/S5e LPH50_04165 PF00164 Ribosomal protein S12/S23 LPH50_04170 PF04998 RNA polymerase Rpb1, domain 5 LPH50_04170 PF05000 RNA polymerase Rpb1, domain 4 LPH50_04170 PF04983 RNA polymerase Rpb1, domain 3 LPH50_04170 PF00623 RNA polymerase Rpb1, domain 2 LPH50_04170 PF04997 RNA polymerase Rpb1, domain 1 LPH50_04175 PF04563 RNA polymerase beta subunit LPH50_04175 PF04560 RNA polymerase Rpb2, domain 7 LPH50_04175 PF00562 RNA polymerase Rpb2, domain 6 LPH50_04175 PF10385 RNA polymerase beta subunit external 1 domain LPH50_04175 PF04565 RNA polymerase Rpb2, domain 3 LPH50_04175 PF04561 RNA polymerase Rpb2, domain 2 LPH50_04180 PF16320 Ribosomal protein L7/L12 dimerisation domain LPH50_04180 PF00542 Ribosomal protein L7/L12 C-terminal domain LPH50_04185 PF00466 Ribosomal protein L10 LPH50_04190 PF00687 Ribosomal protein L1p/L10e family LPH50_04195 PF00298 Ribosomal protein L11, RNA binding domain LPH50_04195 PF03946 Ribosomal protein L11, N-terminal domain LPH50_04200 PF00467 KOW motif LPH50_04200 PF02357 Transcription termination factor nusG LPH50_04205 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LPH50_04215 PF03143 Elongation factor Tu C-terminal domain LPH50_04215 PF03144 Elongation factor Tu domain 2 LPH50_04215 PF00009 Elongation factor Tu GTP binding domain LPH50_04235 PF01926 50S ribosome-binding GTPase LPH50_04235 PF06071 Protein of unknown function (DUF933) LPH50_04240 PF01195 Peptidyl-tRNA hydrolase LPH50_04245 PF01386 Ribosomal L25p family LPH50_04245 PF14693 Ribosomal protein TL5, C-terminal domain LPH50_04250 PF14572 Phosphoribosyl synthetase-associated domain LPH50_04250 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LPH50_04260 PF08544 GHMP kinases C terminal LPH50_04260 PF00288 GHMP kinases N terminal domain LPH50_04265 PF03550 Outer membrane lipoprotein LolB LPH50_04275 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LPH50_04275 PF01488 Shikimate / quinate 5-dehydrogenase LPH50_04275 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LPH50_04280 PF03462 PCRF domain LPH50_04280 PF00472 RF-1 domain LPH50_04290 PF01170 Putative RNA methylase family UPF0020 LPH50_04290 PF02926 THUMP domain LPH50_04290 PF10672 S-adenosylmethionine-dependent methyltransferase LPH50_04350 PF00497 Bacterial extracellular solute-binding proteins, family 3 LPH50_04355 PF00528 Binding-protein-dependent transport system inner membrane component LPH50_04360 PF00005 ABC transporter LPH50_04365 PF00528 Binding-protein-dependent transport system inner membrane component LPH50_04370 PF13361 UvrD-like helicase C-terminal domain LPH50_04370 PF00580 UvrD/REP helicase N-terminal domain LPH50_04370 PF12705 PD-(D/E)XK nuclease superfamily LPH50_04380 PF01914 MarC family integral membrane protein LPH50_04385 PF00462 Glutaredoxin LPH50_04390 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LPH50_04390 PF02222 ATP-grasp domain LPH50_04395 PF00731 AIR carboxylase LPH50_04415 PF07731 Multicopper oxidase LPH50_04415 PF07732 Multicopper oxidase LPH50_04425 PF00580 UvrD/REP helicase N-terminal domain LPH50_04425 PF13361 UvrD-like helicase C-terminal domain LPH50_04435 PF04349 Periplasmic glucan biosynthesis protein, MdoG LPH50_04440 PF01343 Peptidase family S49 LPH50_04445 PF01554 MatE LPH50_04460 PF00270 DEAD/DEAH box helicase LPH50_04460 PF00271 Helicase conserved C-terminal domain LPH50_04460 PF17764 3′ DNA-binding domain (3′BD) LPH50_04460 PF18074 Primosomal protein N C-terminal domain LPH50_04460 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LPH50_04465 PF00140 Sigma-70 factor, region 1.2 LPH50_04465 PF04542 Sigma-70 region 2 LPH50_04465 PF04545 Sigma-70, region 4 LPH50_04470 PF03167 Uracil DNA glycosylase superfamily LPH50_04475 PF00072 Response regulator receiver domain LPH50_04475 PF01339 CheB methylesterase LPH50_04480 PF18075 FtsX extracellular domain LPH50_04485 PF00005 ABC transporter LPH50_04490 PF00270 DEAD/DEAH box helicase LPH50_04490 PF00271 Helicase conserved C-terminal domain LPH50_04490 PF12300 ATP-dependent RNA helicase RhlB LPH50_04495 PF00085 Thioredoxin LPH50_04500 PF07497 Rho termination factor, RNA-binding domain LPH50_04500 PF07498 Rho termination factor, N-terminal domain LPH50_04500 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LPH50_04505 PF03971 Monomeric isocitrate dehydrogenase LPH50_04510 PF09704 CRISPR-associated protein (Cas_Cas5) LPH50_04525 PF03572 Peptidase family S41 LPH50_04525 PF13180 PDZ domain LPH50_04530 PF01551 Peptidase family M23 LPH50_04540 PF00150 Cellulase (glycosyl hydrolase family 5) LPH50_04560 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LPH50_04560 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPH50_04565 PF00310 Glutamine amidotransferases class-II LPH50_04565 PF04898 Glutamate synthase central domain LPH50_04565 PF01645 Conserved region in glutamate synthase LPH50_04565 PF01493 GXGXG motif LPH50_04575 PF14748 Pyrroline-5-carboxylate reductase dimerisation LPH50_04575 PF03807 NADP oxidoreductase coenzyme F420-dependent LPH50_04660 PF13332 Hemagglutinin repeat LPH50_04660 PF05860 haemagglutination activity domain LPH50_04660 PF04829 Pre-toxin domain with VENN motif LPH50_04665 PF13018 Extended Signal Peptide of Type V secretion system LPH50_04665 PF13332 Hemagglutinin repeat LPH50_04665 PF05860 haemagglutination activity domain LPH50_04665 PF04829 Pre-toxin domain with VENN motif LPH50_04705 PF12008 Type I restriction and modification enzyme - subunit R C terminal LPH50_04705 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LPH50_04705 PF18766 SWI2/SNF2 ATPase LPH50_04710 PF01420 Type I restriction modification DNA specificity domain LPH50_04720 PF12161 HsdM N-terminal domain LPH50_04720 PF02384 N-6 DNA Methylase LPH50_04805 PF11867 Domain of unknown function (DUF3387) LPH50_04805 PF18766 SWI2/SNF2 ATPase LPH50_04805 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LPH50_04810 PF01420 Type I restriction modification DNA specificity domain LPH50_04815 PF02384 N-6 DNA Methylase LPH50_04820 PF02384 N-6 DNA Methylase LPH50_04930 PF01638 HxlR-like helix-turn-helix LPH50_04935 PF00106 short chain dehydrogenase LPH50_04955 PF00905 Penicillin binding protein transpeptidase domain LPH50_04955 PF00912 Transglycosylase LPH50_04955 PF14814 Bifunctional transglycosylase second domain LPH50_04965 PF04851 Type III restriction enzyme, res subunit LPH50_04965 PF13307 Helicase C-terminal domain LPH50_04975 PF00484 Carbonic anhydrase LPH50_04980 PF00534 Glycosyl transferases group 1 LPH50_04985 PF01522 Polysaccharide deacetylase LPH50_04995 PF00005 ABC transporter LPH50_04995 PF09383 NIL domain LPH50_05000 PF00528 Binding-protein-dependent transport system inner membrane component LPH50_05005 PF03180 NLPA lipoprotein LPH50_05020 PF02817 e3 binding domain LPH50_05020 PF00364 Biotin-requiring enzyme LPH50_05020 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LPH50_05025 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LPH50_05025 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPH50_05035 PF01545 Cation efflux family LPH50_05040 PF01053 Cys/Met metabolism PLP-dependent enzyme LPH50_05045 PF00561 alpha/beta hydrolase fold LPH50_05050 PF01551 Peptidase family M23 LPH50_05060 PF01975 Survival protein SurE LPH50_05075 PF01551 Peptidase family M23 LPH50_05075 PF01476 LysM domain LPH50_05090 PF01168 Alanine racemase, N-terminal domain LPH50_05090 PF00842 Alanine racemase, C-terminal domain LPH50_05095 PF01266 FAD dependent oxidoreductase LPH50_05105 PF01641 SelR domain LPH50_05115 PF00728 Glycosyl hydrolase family 20, catalytic domain LPH50_05115 PF02838 Glycosyl hydrolase family 20, domain 2 LPH50_05115 PF07691 PA14 domain LPH50_05125 PF07691 PA14 domain LPH50_05125 PF01915 Glycosyl hydrolase family 3 C-terminal domain LPH50_05125 PF00933 Glycosyl hydrolase family 3 N terminal domain LPH50_05125 PF14310 Fibronectin type III-like domain LPH50_05140 PF17678 Glycosyl hydrolase family 92 N-terminal domain LPH50_05140 PF07971 Glycosyl hydrolase family 92 LPH50_05145 PF01301 Glycosyl hydrolases family 35 LPH50_05150 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LPH50_05155 PF00639 PPIC-type PPIASE domain LPH50_05155 PF09312 SurA N-terminal domain LPH50_05160 PF04453 LPS transport system D LPH50_05170 PF01494 FAD binding domain LPH50_05175 PF01494 FAD binding domain LPH50_05180 PF06719 AraC-type transcriptional regulator N-terminus LPH50_05180 PF12833 Helix-turn-helix domain LPH50_05185 PF02525 Flavodoxin-like fold LPH50_05195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH50_05195 PF03466 LysR substrate binding domain LPH50_05200 PF10414 Sirohaem synthase dimerisation region LPH50_05200 PF14824 Sirohaem biosynthesis protein central LPH50_05200 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LPH50_05205 PF00291 Pyridoxal-phosphate dependent enzyme LPH50_05215 PF00274 Fructose-bisphosphate aldolase class-I LPH50_05230 PF02887 Pyruvate kinase, alpha/beta domain LPH50_05230 PF00224 Pyruvate kinase, barrel domain LPH50_05235 PF00162 Phosphoglycerate kinase LPH50_05250 PF00749 tRNA synthetases class I (E and Q), catalytic domain LPH50_05255 PF01475 Ferric uptake regulator family LPH50_05270 PF00553 Cellulose binding domain LPH50_05270 PF00150 Cellulase (glycosyl hydrolase family 5) LPH50_05280 PF00675 Insulinase (Peptidase family M16) LPH50_05280 PF05193 Peptidase M16 inactive domain LPH50_05295 PF03330 Lytic transglycolase LPH50_05300 PF07516 SecA Wing and Scaffold domain LPH50_05300 PF01043 SecA preprotein cross-linking domain LPH50_05300 PF07517 SecA DEAD-like domain LPH50_05300 PF02810 SEC-C motif LPH50_05305 PF01551 Peptidase family M23 LPH50_05305 PF08525 Opacity-associated protein A N-terminal motif LPH50_05305 PF01476 LysM domain LPH50_05315 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LPH50_05320 PF00091 Tubulin/FtsZ family, GTPase domain LPH50_05320 PF12327 FtsZ family, C-terminal domain LPH50_05325 PF02491 SHS2 domain inserted in FTSA LPH50_05330 PF03799 Cell division protein FtsQ LPH50_05330 PF08478 POTRA domain, FtsQ-type LPH50_05335 PF07478 D-ala D-ala ligase C-terminus LPH50_05340 PF01225 Mur ligase family, catalytic domain LPH50_05340 PF02875 Mur ligase family, glutamate ligase domain LPH50_05340 PF08245 Mur ligase middle domain LPH50_05345 PF04101 Glycosyltransferase family 28 C-terminal domain LPH50_05345 PF03033 Glycosyltransferase family 28 N-terminal domain LPH50_05350 PF01098 Cell cycle protein LPH50_05355 PF00953 Glycosyl transferase family 4 LPH50_05360 PF08245 Mur ligase middle domain LPH50_05360 PF02875 Mur ligase family, glutamate ligase domain LPH50_05360 PF01225 Mur ligase family, catalytic domain LPH50_05365 PF01225 Mur ligase family, catalytic domain LPH50_05365 PF08245 Mur ligase middle domain LPH50_05365 PF02875 Mur ligase family, glutamate ligase domain LPH50_05370 PF03717 Penicillin-binding Protein dimerisation domain LPH50_05370 PF00905 Penicillin binding protein transpeptidase domain LPH50_05375 PF04999 Cell division protein FtsL LPH50_05380 PF01795 MraW methylase family LPH50_05385 PF02381 MraZ protein, putative antitoxin-like LPH50_05390 PF02080 TrkA-C domain LPH50_05390 PF03600 Citrate transporter LPH50_05395 PF02390 Putative methyltransferase LPH50_05400 PF05690 Thiazole biosynthesis protein ThiG LPH50_05410 PF03797 Autotransporter beta-domain LPH50_05410 PF00657 GDSL-like Lipase/Acylhydrolase LPH50_05440 PF07977 FabA-like domain LPH50_05465 PF00692 dUTPase LPH50_05475 PF01119 DNA mismatch repair protein, C-terminal domain LPH50_05475 PF08676 MutL C terminal dimerisation domain LPH50_05480 PF01520 N-acetylmuramoyl-L-alanine amidase LPH50_05480 PF11741 AMIN domain LPH50_05485 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LPH50_05490 PF03853 YjeF-related protein N-terminus LPH50_05490 PF01256 Carbohydrate kinase LPH50_05495 PF13742 OB-fold nucleic acid binding domain LPH50_05495 PF02601 Exonuclease VII, large subunit LPH50_05510 PF01612 3'-5' exonuclease LPH50_05510 PF00570 HRDC domain LPH50_05540 PF00216 Bacterial DNA-binding protein LPH50_05545 PF03147 Ferredoxin-fold anticodon binding domain LPH50_05545 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LPH50_05545 PF01588 Putative tRNA binding domain LPH50_05545 PF03484 tRNA synthetase B5 domain LPH50_05545 PF03483 B3/4 domain LPH50_05550 PF01409 tRNA synthetases class II core domain (F) LPH50_05550 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LPH50_05555 PF00453 Ribosomal protein L20 LPH50_05560 PF01632 Ribosomal protein L35 LPH50_05565 PF00707 Translation initiation factor IF-3, C-terminal domain LPH50_05565 PF05198 Translation initiation factor IF-3, N-terminal domain LPH50_05570 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LPH50_05570 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LPH50_05570 PF02824 TGS domain LPH50_05570 PF03129 Anticodon binding domain LPH50_05580 PF18030 RimK PreATP-grasp domain LPH50_05580 PF08443 RimK-like ATP-grasp domain LPH50_05585 PF00486 Transcriptional regulatory protein, C terminal LPH50_05585 PF00072 Response regulator receiver domain LPH50_05590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH50_05590 PF00512 His Kinase A (phospho-acceptor) domain LPH50_05590 PF00989 PAS fold LPH50_05590 PF11808 Phosphate regulon sensor protein PhoR LPH50_05595 PF01121 Dephospho-CoA kinase LPH50_05600 PF06750 Bacterial Peptidase A24 N-terminal domain LPH50_05600 PF01478 Type IV leader peptidase family LPH50_05605 PF00482 Type II secretion system (T2SS), protein F LPH50_05610 PF00114 Pilin (bacterial filament) LPH50_05610 PF07963 Prokaryotic N-terminal methylation motif LPH50_05620 PF07963 Prokaryotic N-terminal methylation motif LPH50_05620 PF00114 Pilin (bacterial filament) LPH50_05625 PF00114 Pilin (bacterial filament) LPH50_05625 PF07963 Prokaryotic N-terminal methylation motif LPH50_05635 PF00437 Type II/IV secretion system protein LPH50_05635 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LPH50_05640 PF02954 Bacterial regulatory protein, Fis family LPH50_05640 PF00072 Response regulator receiver domain LPH50_05640 PF00158 Sigma-54 interaction domain LPH50_05645 PF00512 His Kinase A (phospho-acceptor) domain LPH50_05645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH50_05650 PF00549 CoA-ligase LPH50_05650 PF08442 ATP-grasp domain LPH50_05655 PF00549 CoA-ligase LPH50_05655 PF02629 CoA binding domain LPH50_05660 PF01926 50S ribosome-binding GTPase LPH50_05660 PF12631 MnmE helical domain LPH50_05660 PF10396 GTP-binding protein TrmE N-terminus LPH50_05670 PF02096 60Kd inner membrane protein LPH50_05670 PF14849 YidC periplasmic domain LPH50_05675 PF00825 Ribonuclease P LPH50_05680 PF00468 Ribosomal protein L34 LPH50_05685 PF00308 Bacterial dnaA protein LPH50_05685 PF08299 Bacterial dnaA protein helix-turn-helix LPH50_05685 PF11638 DnaA N-terminal domain LPH50_05690 PF02767 DNA polymerase III beta subunit, central domain LPH50_05690 PF00712 DNA polymerase III beta subunit, N-terminal domain LPH50_05690 PF02768 DNA polymerase III beta subunit, C-terminal domain LPH50_05695 PF02463 RecF/RecN/SMC N terminal domain LPH50_05700 PF00204 DNA gyrase B LPH50_05700 PF00986 DNA gyrase B subunit, carboxyl terminus LPH50_05700 PF18053 DNA gyrase B subunit insert domain LPH50_05700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH50_05700 PF01751 Toprim domain LPH50_05710 PF01435 Peptidase family M48 LPH50_05720 PF03544 Gram-negative bacterial TonB protein C-terminal LPH50_05725 PF01618 MotA/TolQ/ExbB proton channel family LPH50_05730 PF02472 Biopolymer transport protein ExbD/TolR LPH50_05735 PF02472 Biopolymer transport protein ExbD/TolR LPH50_05755 PF01218 Coproporphyrinogen III oxidase LPH50_05780 PF00793 DAHP synthetase I family LPH50_05785 PF07963 Prokaryotic N-terminal methylation motif LPH50_05785 PF00114 Pilin (bacterial filament) LPH50_05805 PF05567 Neisseria PilC beta-propeller domain LPH50_05810 PF00114 Pilin (bacterial filament) LPH50_05810 PF07963 Prokaryotic N-terminal methylation motif LPH50_05815 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LPH50_05820 PF00155 Aminotransferase class I and II LPH50_05825 PF01741 Large-conductance mechanosensitive channel, MscL LPH50_05850 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ LPH50_05860 PF17757 UvrB interaction domain LPH50_05860 PF03461 TRCF domain LPH50_05860 PF00271 Helicase conserved C-terminal domain LPH50_05860 PF00270 DEAD/DEAH box helicase LPH50_05860 PF02559 CarD-like/TRCF domain LPH50_05865 PF01220 Dehydroquinase class II LPH50_05870 PF00364 Biotin-requiring enzyme LPH50_05875 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LPH50_05875 PF00289 Biotin carboxylase, N-terminal domain LPH50_05875 PF02785 Biotin carboxylase C-terminal domain LPH50_05880 PF13361 UvrD-like helicase C-terminal domain LPH50_05880 PF00580 UvrD/REP helicase N-terminal domain LPH50_05890 PF00970 Oxidoreductase FAD-binding domain LPH50_05890 PF00175 Oxidoreductase NAD-binding domain LPH50_05890 PF00042 Globin LPH50_05900 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ LPH50_05910 PF08535 KorB domain LPH50_05910 PF06613 KorB C-terminal beta-barrel domain LPH50_05910 PF02195 ParB-like nuclease domain LPH50_05925 PF06968 Biotin and Thiamin Synthesis associated domain LPH50_05925 PF04055 Radical SAM superfamily LPH50_05930 PF01734 Patatin-like phospholipase LPH50_05935 PF01040 UbiA prenyltransferase family LPH50_05950 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family LPH50_05985 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LPH50_05985 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LPH50_05995 PF02881 SRP54-type protein, helical bundle domain LPH50_05995 PF02978 Signal peptide binding domain LPH50_05995 PF00448 SRP54-type protein, GTPase domain LPH50_06015 PF00577 Outer membrane usher protein LPH50_06015 PF13954 PapC N-terminal domain LPH50_06015 PF13953 PapC C-terminal domain LPH50_06020 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LPH50_06020 PF02753 Pili assembly chaperone PapD, C-terminal domain LPH50_06025 PF16970 Type-1 fimbrial protein, A LPH50_06030 PF02464 Competence-damaged protein LPH50_06035 PF00083 Sugar (and other) transporter LPH50_06040 PF01926 50S ribosome-binding GTPase LPH50_06040 PF13167 GTP-binding GTPase N-terminal LPH50_06040 PF16360 GTP-binding GTPase Middle Region LPH50_06045 PF17209 Hfq protein LPH50_06055 PF00809 Pterin binding enzyme LPH50_06060 PF00004 ATPase family associated with various cellular activities (AAA) LPH50_06060 PF06480 FtsH Extracellular LPH50_06060 PF01434 Peptidase family M41 LPH50_06060 PF17862 AAA+ lid domain LPH50_06065 PF01728 FtsJ-like methyltransferase LPH50_06070 PF01985 CRS1 / YhbY (CRM) domain LPH50_06085 PF00920 Dehydratase family LPH50_06115 PF03279 Bacterial lipid A biosynthesis acyltransferase LPH50_06120 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) LPH50_06135 PF00886 Ribosomal protein S16 LPH50_06140 PF01782 RimM N-terminal domain LPH50_06140 PF05239 PRC-barrel domain LPH50_06145 PF01746 tRNA (Guanine-1)-methyltransferase LPH50_06150 PF01245 Ribosomal protein L19 LPH50_06155 PF00557 Metallopeptidase family M24 LPH50_06165 PF14602 Hexapeptide repeat of succinyl-transferase LPH50_06165 PF00132 Bacterial transferase hexapeptide (six repeats) LPH50_06165 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal LPH50_06170 PF03960 ArsC family LPH50_06175 PF01546 Peptidase family M20/M25/M40 LPH50_06175 PF07687 Peptidase dimerisation domain LPH50_06180 PF13537 Glutamine amidotransferase domain LPH50_06180 PF00733 Asparagine synthase LPH50_06190 PF03060 Nitronate monooxygenase LPH50_06200 PF00717 Peptidase S24-like LPH50_06200 PF01726 LexA DNA binding domain LPH50_06205 PF00154 recA bacterial DNA recombination protein LPH50_06210 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LPH50_06210 PF01411 tRNA synthetases class II (A) LPH50_06210 PF02272 DHHA1 domain LPH50_06215 PF02599 Global regulator protein family LPH50_06225 PF01432 Peptidase family M3 LPH50_06240 PF07731 Multicopper oxidase LPH50_06240 PF07732 Multicopper oxidase LPH50_06240 PF00394 Multicopper oxidase LPH50_06245 PF05275 Copper resistance protein B precursor (CopB) LPH50_06250 PF08264 Anticodon-binding domain of tRNA LPH50_06250 PF00133 tRNA synthetases class I (I, L, M and V) LPH50_06250 PF10458 Valyl tRNA synthetase tRNA binding arm LPH50_06270 PF00883 Cytosol aminopeptidase family, catalytic domain LPH50_06270 PF02789 Cytosol aminopeptidase family, N-terminal domain LPH50_06290 PF01380 SIS domain LPH50_06305 PF17284 Spermidine synthase tetramerisation domain LPH50_06310 PF17810 Arginine decarboxylase helical bundle domain LPH50_06310 PF17944 Arginine decarboxylase C-terminal helical extension LPH50_06310 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LPH50_06315 PF00106 short chain dehydrogenase LPH50_06325 PF03485 Arginyl tRNA synthetase N terminal domain LPH50_06325 PF00750 tRNA synthetases class I (R) LPH50_06325 PF05746 DALR anticodon binding domain LPH50_06330 PF04002 RadC-like JAB domain LPH50_06335 PF04127 DNA / pantothenate metabolism flavoprotein LPH50_06335 PF02441 Flavoprotein LPH50_06340 PF00692 dUTPase LPH50_06345 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LPH50_06345 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LPH50_06345 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LPH50_06345 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LPH50_06355 PF00156 Phosphoribosyl transferase domain LPH50_06410 PF07690 Major Facilitator Superfamily LPH50_06415 PF03702 Anhydro-N-acetylmuramic acid kinase LPH50_06420 PF04225 Opacity-associated protein A LysM-like domain LPH50_06420 PF01551 Peptidase family M23 LPH50_06425 PF00579 tRNA synthetases class I (W and Y) LPH50_06455 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LPH50_06455 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LPH50_06485 PF16658 Class II release factor RF3, C-terminal domain LPH50_06485 PF00009 Elongation factor Tu GTP binding domain LPH50_06490 PF03006 Haemolysin-III related LPH50_06495 PF00535 Glycosyl transferase family 2 LPH50_06505 PF01026 TatD related DNase LPH50_06520 PF01597 Glycine cleavage H-protein LPH50_06525 PF08669 Glycine cleavage T-protein C-terminal barrel domain LPH50_06525 PF01571 Aminomethyltransferase folate-binding domain LPH50_06535 PF16200 C-terminal region of band_7 LPH50_06535 PF01145 SPFH domain / Band 7 family LPH50_06540 PF03819 MazG nucleotide pyrophosphohydrolase domain LPH50_06545 PF00459 Inositol monophosphatase family LPH50_06550 PF00293 NUDIX domain LPH50_06555 PF00202 Aminotransferase class-III LPH50_06560 PF04452 RNA methyltransferase LPH50_06570 PF00271 Helicase conserved C-terminal domain LPH50_06570 PF00270 DEAD/DEAH box helicase LPH50_06575 PF01242 6-pyruvoyl tetrahydropterin synthase LPH50_06600 PF03653 Uncharacterised protein family (UPF0093) LPH50_06605 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LPH50_06610 PF14579 Helix-hairpin-helix motif LPH50_06610 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LPH50_06610 PF07733 Bacterial DNA polymerase III alpha NTPase domain LPH50_06610 PF01336 OB-fold nucleic acid binding domain LPH50_06610 PF02811 PHP domain LPH50_06615 PF01259 SAICAR synthetase LPH50_06620 PF05099 Tellurite resistance protein TerB LPH50_06620 PF00226 DnaJ domain LPH50_06625 PF00834 Ribulose-phosphate 3 epimerase family LPH50_06635 PF00425 chorismate binding enzyme LPH50_06635 PF04715 Anthranilate synthase component I, N terminal region LPH50_06640 PF00117 Glutamine amidotransferase class-I LPH50_06645 PF00591 Glycosyl transferase family, a/b domain LPH50_06645 PF02885 Glycosyl transferase family, helical bundle domain LPH50_06650 PF00218 Indole-3-glycerol phosphate synthase LPH50_06665 PF12849 PBP superfamily domain LPH50_06685 PF01321 Creatinase/Prolidase N-terminal domain LPH50_06685 PF00557 Metallopeptidase family M24 LPH50_06700 PF01702 Queuine tRNA-ribosyltransferase LPH50_06705 PF02699 Preprotein translocase subunit LPH50_06710 PF07549 SecD/SecF GG Motif LPH50_06710 PF13721 SecD export protein N-terminal TM region LPH50_06710 PF02355 Protein export membrane protein LPH50_06715 PF07549 SecD/SecF GG Motif LPH50_06715 PF02355 Protein export membrane protein LPH50_06725 PF01743 Poly A polymerase head domain LPH50_06725 PF12626 Polymerase A arginine-rich C-terminus LPH50_06725 PF12627 Probable RNA and SrmB- binding site of polymerase A LPH50_06730 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LPH50_06735 PF02548 Ketopantoate hydroxymethyltransferase LPH50_06740 PF02569 Pantoate-beta-alanine ligase LPH50_06745 PF02261 Aspartate decarboxylase LPH50_06750 PF00342 Phosphoglucose isomerase LPH50_06760 PF17384 RimP C-terminal SH3 domain LPH50_06760 PF02576 RimP N-terminal domain LPH50_06765 PF00575 S1 RNA binding domain LPH50_06765 PF13184 NusA-like KH domain LPH50_06765 PF08529 NusA N-terminal domain LPH50_06770 PF00009 Elongation factor Tu GTP binding domain LPH50_06770 PF11987 Translation-initiation factor 2 LPH50_06770 PF08364 Bacterial translation initiation factor IF-2 associated region LPH50_06770 PF04760 Translation initiation factor IF-2, N-terminal region LPH50_06775 PF02033 Ribosome-binding factor A LPH50_06780 PF16198 tRNA pseudouridylate synthase B C-terminal domain LPH50_06780 PF01509 TruB family pseudouridylate synthase (N terminal domain) LPH50_06780 PF09157 Pseudouridine synthase II TruB, C-terminal LPH50_06785 PF00312 Ribosomal protein S15 LPH50_06790 PF00013 KH domain LPH50_06790 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LPH50_06790 PF01138 3' exoribonuclease family, domain 1 LPH50_06790 PF03725 3' exoribonuclease family, domain 2 LPH50_06790 PF00575 S1 RNA binding domain LPH50_06795 PF01638 HxlR-like helix-turn-helix LPH50_06800 PF05368 NmrA-like family LPH50_06805 PF00873 AcrB/AcrD/AcrF family LPH50_06815 PF00999 Sodium/hydrogen exchanger family LPH50_06835 PF00271 Helicase conserved C-terminal domain LPH50_06835 PF00270 DEAD/DEAH box helicase LPH50_06835 PF03880 DbpA RNA binding domain LPH50_06840 PF00766 Electron transfer flavoprotein FAD-binding domain LPH50_06840 PF01012 Electron transfer flavoprotein domain LPH50_06845 PF01012 Electron transfer flavoprotein domain LPH50_06850 PF16363 GDP-mannose 4,6 dehydratase LPH50_06855 PF00483 Nucleotidyl transferase LPH50_06860 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LPH50_06865 PF04321 RmlD substrate binding domain LPH50_06870 PF01050 Mannose-6-phosphate isomerase LPH50_06870 PF00483 Nucleotidyl transferase LPH50_06875 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LPH50_06875 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LPH50_06875 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LPH50_06875 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LPH50_06925 PF00082 Subtilase family LPH50_06925 PF03797 Autotransporter beta-domain LPH50_06925 PF12951 Passenger-associated-transport-repeat LPH50_06930 PF00082 Subtilase family LPH50_06930 PF12951 Passenger-associated-transport-repeat LPH50_06930 PF03797 Autotransporter beta-domain LPH50_06935 PF06779 Uncharacterised MFS-type transporter YbfB LPH50_06940 PF07669 Eco57I restriction-modification methylase LPH50_06950 PF00365 Phosphofructokinase LPH50_06960 PF08245 Mur ligase middle domain LPH50_06960 PF02875 Mur ligase family, glutamate ligase domain LPH50_06960 PF01225 Mur ligase family, catalytic domain LPH50_06965 PF01569 PAP2 superfamily LPH50_06985 PF00892 EamA-like transporter family LPH50_06990 PF02789 Cytosol aminopeptidase family, N-terminal domain LPH50_06990 PF00883 Cytosol aminopeptidase family, catalytic domain LPH50_07000 PF01594 AI-2E family transporter LPH50_07020 PF00595 PDZ domain LPH50_07025 PF01370 NAD dependent epimerase/dehydratase family LPH50_07025 PF08338 Domain of unknown function (DUF1731) LPH50_07030 PF13193 AMP-binding enzyme C-terminal domain LPH50_07030 PF00501 AMP-binding enzyme LPH50_07035 PF00694 Aconitase C-terminal domain LPH50_07035 PF00330 Aconitase family (aconitate hydratase) LPH50_07050 PF11791 Aconitate B N-terminal domain LPH50_07050 PF06434 Aconitate hydratase 2 N-terminus LPH50_07050 PF00330 Aconitase family (aconitate hydratase) LPH50_07065 PF02384 N-6 DNA Methylase LPH50_07070 PF01420 Type I restriction modification DNA specificity domain LPH50_07085 PF18766 SWI2/SNF2 ATPase LPH50_07085 PF11867 Domain of unknown function (DUF3387) LPH50_07085 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LPH50_07110 PF00121 Triosephosphate isomerase LPH50_07125 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LPH50_07130 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LPH50_07135 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LPH50_07140 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LPH50_07150 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LPH50_07150 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LPH50_07150 PF10531 SLBB domain LPH50_07155 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal LPH50_07155 PF00384 Molybdopterin oxidoreductase LPH50_07155 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LPH50_07160 PF00146 NADH dehydrogenase LPH50_07165 PF12838 4Fe-4S dicluster domain LPH50_07170 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LPH50_07175 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LPH50_07180 PF00361 Proton-conducting membrane transporter LPH50_07180 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LPH50_07185 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus LPH50_07185 PF00361 Proton-conducting membrane transporter LPH50_07190 PF00361 Proton-conducting membrane transporter LPH50_07195 PF00106 short chain dehydrogenase LPH50_07200 PF03600 Citrate transporter LPH50_07210 PF00486 Transcriptional regulatory protein, C terminal LPH50_07210 PF00072 Response regulator receiver domain LPH50_07215 PF08521 Two-component sensor kinase N-terminal LPH50_07215 PF00512 His Kinase A (phospho-acceptor) domain LPH50_07215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH50_07225 PF00196 Bacterial regulatory proteins, luxR family LPH50_07225 PF00072 Response regulator receiver domain LPH50_07230 PF00672 HAMP domain LPH50_07230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH50_07230 PF00512 His Kinase A (phospho-acceptor) domain LPH50_07230 PF00072 Response regulator receiver domain LPH50_07230 PF01627 Hpt domain LPH50_07240 PF00375 Sodium:dicarboxylate symporter family LPH50_07245 PF01515 Phosphate acetyl/butaryl transferase LPH50_07245 PF03949 Malic enzyme, NAD binding domain LPH50_07245 PF00390 Malic enzyme, N-terminal domain LPH50_07250 PF00183 Hsp90 protein LPH50_07250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH50_07260 PF01467 Cytidylyltransferase-like LPH50_07270 PF00037 4Fe-4S binding domain LPH50_07280 PF00990 Diguanylate cyclase, GGDEF domain LPH50_07285 PF01551 Peptidase family M23 LPH50_07285 PF01476 LysM domain LPH50_07290 PF01979 Amidohydrolase family LPH50_07295 PF01809 Putative membrane protein insertion efficiency factor LPH50_07300 PF01258 Prokaryotic dksA/traR C4-type zinc finger LPH50_07325 PF02657 Fe-S metabolism associated domain LPH50_07330 PF09190 DALR domain LPH50_07330 PF01406 tRNA synthetases class I (C) catalytic domain LPH50_07340 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LPH50_07340 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LPH50_07345 PF00764 Arginosuccinate synthase LPH50_07350 PF07687 Peptidase dimerisation domain LPH50_07350 PF01546 Peptidase family M20/M25/M40 LPH50_07355 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase LPH50_07355 PF00696 Amino acid kinase family LPH50_07365 PF01118 Semialdehyde dehydrogenase, NAD binding domain LPH50_07370 PF00206 Lyase LPH50_07380 PF01472 PUA domain LPH50_07380 PF00696 Amino acid kinase family LPH50_07385 PF00171 Aldehyde dehydrogenase family LPH50_07395 PF02796 Helix-turn-helix domain of resolvase LPH50_07395 PF00239 Resolvase, N terminal domain LPH50_07420 PF00239 Resolvase, N terminal domain LPH50_07420 PF02796 Helix-turn-helix domain of resolvase LPH50_07435 PF13700 Domain of unknown function (DUF4158) LPH50_07435 PF01526 Tn3 transposase DDE domain LPH50_07465 PF03524 Conjugal transfer protein LPH50_07505 PF01593 Flavin containing amine oxidoreductase LPH50_07515 PF02627 Carboxymuconolactone decarboxylase family LPH50_07535 PF03466 LysR substrate binding domain LPH50_07535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH50_07540 PF05016 ParE toxin of type II toxin-antitoxin system, parDE LPH50_07545 PF09386 Antitoxin ParD LPH50_07550 PF02796 Helix-turn-helix domain of resolvase LPH50_07550 PF00239 Resolvase, N terminal domain LPH50_07575 PF02796 Helix-turn-helix domain of resolvase LPH50_07575 PF00239 Resolvase, N terminal domain LPH50_07615 PF06594 Haemolysin-type calcium binding protein related domain LPH50_07615 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) LPH50_07620 PF14437 MafB19-like deaminase LPH50_07625 PF01325 Iron dependent repressor, N-terminal DNA binding domain LPH50_07625 PF02742 Iron dependent repressor, metal binding and dimerisation domain LPH50_07630 PF01566 Natural resistance-associated macrophage protein LPH50_07645 PF04377 Arginine-tRNA-protein transferase, C terminus LPH50_07645 PF04376 Arginine-tRNA-protein transferase, N terminus LPH50_07680 PF00082 Subtilase family LPH50_07680 PF12951 Passenger-associated-transport-repeat LPH50_07680 PF03797 Autotransporter beta-domain LPH50_07705 PF01553 Acyltransferase LPH50_07715 PF05221 S-adenosyl-L-homocysteine hydrolase LPH50_07715 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain LPH50_07730 PF01351 Ribonuclease HII LPH50_07735 PF02684 Lipid-A-disaccharide synthetase LPH50_07740 PF00132 Bacterial transferase hexapeptide (six repeats) LPH50_07740 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LPH50_07745 PF07977 FabA-like domain LPH50_07750 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LPH50_07750 PF00132 Bacterial transferase hexapeptide (six repeats) LPH50_07755 PF07244 Surface antigen variable number repeat LPH50_07755 PF01103 Surface antigen LPH50_07760 PF17820 PDZ domain LPH50_07760 PF02163 Peptidase family M50 LPH50_07765 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LPH50_07765 PF13288 DXP reductoisomerase C-terminal domain LPH50_07765 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LPH50_07775 PF01255 Putative undecaprenyl diphosphate synthase LPH50_07780 PF01765 Ribosome recycling factor LPH50_07805 PF04305 Protein of unknown function (DUF455) LPH50_07810 PF00696 Amino acid kinase family LPH50_07880 PF01081 KDPG and KHG aldolase LPH50_07885 PF00920 Dehydratase family LPH50_07890 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LPH50_07895 PF02685 Glucokinase LPH50_07900 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LPH50_07900 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LPH50_07905 PF17912 MalK OB fold domain LPH50_07905 PF00005 ABC transporter LPH50_07920 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LPH50_07925 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LPH50_07930 PF02910 Fumarate reductase flavoprotein C-term LPH50_07930 PF00890 FAD binding domain LPH50_07935 PF13085 2Fe-2S iron-sulfur cluster binding domain LPH50_07935 PF13237 4Fe-4S dicluster domain LPH50_07940 PF03937 Flavinator of succinate dehydrogenase LPH50_07950 PF12704 MacB-like periplasmic core domain LPH50_07950 PF02687 FtsX-like permease family LPH50_07955 PF00005 ABC transporter LPH50_07960 PF03772 Competence protein LPH50_07960 PF00753 Metallo-beta-lactamase superfamily LPH50_07975 PF00005 ABC transporter LPH50_07975 PF00664 ABC transporter transmembrane region LPH50_07980 PF02606 Tetraacyldisaccharide-1-P 4'-kinase LPH50_07985 PF01883 Iron-sulfur cluster assembly protein LPH50_07985 PF10609 NUBPL iron-transfer P-loop NTPase LPH50_08000 PF13091 PLD-like domain LPH50_08025 PF03358 NADPH-dependent FMN reductase LPH50_08030 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LPH50_08030 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LPH50_08045 PF01300 Telomere recombination LPH50_08050 PF01751 Toprim domain LPH50_08050 PF13368 Topoisomerase C-terminal repeat LPH50_08050 PF01131 DNA topoisomerase LPH50_08060 PF04361 Protein of unknown function (DUF494) LPH50_08065 PF17782 DprA winged helix domain LPH50_08065 PF02481 DNA recombination-mediator protein A LPH50_08075 PF01327 Polypeptide deformylase LPH50_08080 PF02911 Formyl transferase, C-terminal domain LPH50_08080 PF00551 Formyl transferase LPH50_08085 PF01189 16S rRNA methyltransferase RsmB/F LPH50_08085 PF01029 NusB family LPH50_08090 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase LPH50_08105 PF07963 Prokaryotic N-terminal methylation motif LPH50_08105 PF00114 Pilin (bacterial filament) LPH50_08225 PF01367 5'-3' exonuclease, C-terminal SAM fold LPH50_08225 PF01612 3'-5' exonuclease LPH50_08225 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LPH50_08225 PF00476 DNA polymerase family A LPH50_08230 PF05173 Dihydrodipicolinate reductase, C-terminus LPH50_08230 PF01113 Dihydrodipicolinate reductase, N-terminus LPH50_08235 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LPH50_08235 PF00117 Glutamine amidotransferase class-I LPH50_08240 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LPH50_08240 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LPH50_08240 PF02142 MGS-like domain LPH50_08245 PF01272 Transcription elongation factor, GreA/GreB, C-term LPH50_08245 PF03449 Transcription elongation factor, N-terminal LPH50_08255 PF01368 DHH family LPH50_08255 PF17768 RecJ OB domain LPH50_08255 PF02272 DHHA1 domain LPH50_08265 PF01336 OB-fold nucleic acid binding domain LPH50_08265 PF00152 tRNA synthetases class II (D, K and N) LPH50_08270 PF00072 Response regulator receiver domain LPH50_08275 PF00512 His Kinase A (phospho-acceptor) domain LPH50_08275 PF00072 Response regulator receiver domain LPH50_08275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH50_08275 PF01627 Hpt domain LPH50_08280 PF00378 Enoyl-CoA hydratase/isomerase LPH50_08285 PF00696 Amino acid kinase family LPH50_08285 PF01842 ACT domain LPH50_08295 PF08245 Mur ligase middle domain LPH50_08315 PF00293 NUDIX domain LPH50_08325 PF02219 Methylenetetrahydrofolate reductase LPH50_08335 PF02545 Maf-like protein LPH50_08340 PF10150 Ribonuclease E/G family LPH50_08340 PF00575 S1 RNA binding domain LPH50_08350 PF01523 Putative modulator of DNA gyrase LPH50_08355 PF04751 Protein of unknown function (DUF615) LPH50_08360 PF01523 Putative modulator of DNA gyrase LPH50_08370 PF06250 YhcG PDDEXK nuclease domain LPH50_08370 PF17761 DUF1016 N-terminal domain LPH50_08395 PF03466 LysR substrate binding domain LPH50_08395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH50_08400 PF03358 NADPH-dependent FMN reductase LPH50_08410 PF00107 Zinc-binding dehydrogenase LPH50_08410 PF08240 Alcohol dehydrogenase GroES-like domain LPH50_08425 PF00248 Aldo/keto reductase family LPH50_08440 PF14602 Hexapeptide repeat of succinyl-transferase LPH50_08440 PF00132 Bacterial transferase hexapeptide (six repeats) LPH50_08440 PF12804 MobA-like NTP transferase domain LPH50_08450 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LPH50_08450 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LPH50_08455 PF02874 ATP synthase alpha/beta family, beta-barrel domain LPH50_08455 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LPH50_08460 PF00231 ATP synthase LPH50_08465 PF00306 ATP synthase alpha/beta chain, C terminal domain LPH50_08465 PF02874 ATP synthase alpha/beta family, beta-barrel domain LPH50_08465 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LPH50_08470 PF00213 ATP synthase delta (OSCP) subunit LPH50_08475 PF00430 ATP synthase B/B' CF(0) LPH50_08480 PF00137 ATP synthase subunit C LPH50_08485 PF00119 ATP synthase A chain LPH50_08495 PF00338 Ribosomal protein S10p/S20e LPH50_08500 PF00297 Ribosomal protein L3 LPH50_08505 PF00573 Ribosomal protein L4/L1 family LPH50_08510 PF00276 Ribosomal protein L23 LPH50_08515 PF03947 Ribosomal Proteins L2, C-terminal domain LPH50_08515 PF00181 Ribosomal Proteins L2, RNA binding domain LPH50_08520 PF00203 Ribosomal protein S19 LPH50_08525 PF00237 Ribosomal protein L22p/L17e LPH50_08530 PF07650 KH domain LPH50_08530 PF00189 Ribosomal protein S3, C-terminal domain LPH50_08535 PF00252 Ribosomal protein L16p/L10e LPH50_08540 PF00831 Ribosomal L29 protein LPH50_08545 PF00366 Ribosomal protein S17 LPH50_08550 PF00238 Ribosomal protein L14p/L23e LPH50_08555 PF00467 KOW motif LPH50_08555 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LPH50_08560 PF00281 Ribosomal protein L5 LPH50_08560 PF00673 ribosomal L5P family C-terminus LPH50_08565 PF00253 Ribosomal protein S14p/S29e LPH50_08570 PF00410 Ribosomal protein S8 LPH50_08575 PF00347 Ribosomal protein L6 LPH50_08580 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LPH50_08585 PF03719 Ribosomal protein S5, C-terminal domain LPH50_08585 PF00333 Ribosomal protein S5, N-terminal domain LPH50_08590 PF00327 Ribosomal protein L30p/L7e LPH50_08595 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LPH50_08600 PF00344 SecY translocase LPH50_08605 PF00416 Ribosomal protein S13/S18 LPH50_08610 PF00411 Ribosomal protein S11 LPH50_08615 PF01479 S4 domain LPH50_08615 PF00163 Ribosomal protein S4/S9 N-terminal domain LPH50_08620 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LPH50_08620 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LPH50_08620 PF01000 RNA polymerase Rpb3/RpoA insert domain LPH50_08625 PF01196 Ribosomal protein L17 LPH50_08630 PF04380 Membrane fusogenic activity LPH50_08635 PF13335 Magnesium chelatase, subunit ChlI C-terminal LPH50_08635 PF01078 Magnesium chelatase, subunit ChlI LPH50_08640 PF00561 alpha/beta hydrolase fold LPH50_08655 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LPH50_08655 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LPH50_08655 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LPH50_08670 PF05698 Bacterial trigger factor protein (TF) C-terminus LPH50_08670 PF05697 Bacterial trigger factor protein (TF) LPH50_08675 PF00574 Clp protease LPH50_08680 PF06689 ClpX C4-type zinc finger LPH50_08680 PF10431 C-terminal, D2-small domain, of ClpB protein LPH50_08680 PF07724 AAA domain (Cdc48 subfamily) LPH50_08685 PF05362 Lon protease (S16) C-terminal proteolytic domain LPH50_08685 PF02190 ATP-dependent protease La (LON) substrate-binding domain LPH50_08685 PF00004 ATPase family associated with various cellular activities (AAA) LPH50_08690 PF00216 Bacterial DNA-binding protein LPH50_08715 PF00317 Ribonucleotide reductase, all-alpha domain LPH50_08715 PF03477 ATP cone domain LPH50_08715 PF02867 Ribonucleotide reductase, barrel domain LPH50_08720 PF00268 Ribonucleotide reductase, small chain LPH50_08745 PF01479 S4 domain LPH50_08745 PF00849 RNA pseudouridylate synthase LPH50_08750 PF13419 Haloacid dehalogenase-like hydrolase LPH50_08760 PF00830 Ribosomal L28 family LPH50_08765 PF00471 Ribosomal protein L33 LPH50_08770 PF13396 Phospholipase_D-nuclease N-terminal LPH50_08770 PF13091 PLD-like domain LPH50_08785 PF07963 Prokaryotic N-terminal methylation motif LPH50_08785 PF00114 Pilin (bacterial filament) LPH50_08805 PF01612 3'-5' exonuclease LPH50_08805 PF01367 5'-3' exonuclease, C-terminal SAM fold LPH50_08805 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LPH50_08805 PF00476 DNA polymerase family A LPH50_08825 PF00959 Phage lysozyme LPH50_08845 PF01555 DNA methylase LPH50_08865 PF02798 Glutathione S-transferase, N-terminal domain LPH50_08865 PF00043 Glutathione S-transferase, C-terminal domain LPH50_08870 PF00056 lactate/malate dehydrogenase, NAD binding domain LPH50_08870 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LPH50_08875 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LPH50_08880 PF00679 Elongation factor G C-terminus LPH50_08880 PF03144 Elongation factor Tu domain 2 LPH50_08880 PF00009 Elongation factor Tu GTP binding domain LPH50_08895 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LPH50_08895 PF00529 HlyD membrane-fusion protein of T1SS LPH50_08920 PF00664 ABC transporter transmembrane region LPH50_08920 PF03412 Peptidase C39 family LPH50_08920 PF00005 ABC transporter LPH50_08925 PF01061 ABC-2 type transporter LPH50_08930 PF00005 ABC transporter LPH50_08935 PF05567 Neisseria PilC beta-propeller domain LPH50_08950 PF08482 ATP-dependent helicase C-terminal LPH50_08950 PF00271 Helicase conserved C-terminal domain LPH50_08950 PF00270 DEAD/DEAH box helicase LPH50_08950 PF04408 Helicase associated domain (HA2) LPH50_08960 PF13185 GAF domain LPH50_08965 PF17243 POTRA domain TamA domain 1 LPH50_08965 PF01103 Surface antigen LPH50_08970 PF04357 TamB, inner membrane protein subunit of TAM complex LPH50_08985 PF00285 Citrate synthase, C-terminal domain LPH50_08990 PF00330 Aconitase family (aconitate hydratase) LPH50_08990 PF00694 Aconitase C-terminal domain LPH50_08995 PF04303 PrpF protein LPH50_09015 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain LPH50_09015 PF00207 Alpha-2-macroglobulin family LPH50_09015 PF11974 Bacterial alpha-2-macroglobulin MG3 domain LPH50_09015 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain LPH50_09015 PF17962 Bacterial macroglobulin domain 6 LPH50_09015 PF01835 MG2 domain LPH50_09015 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain LPH50_09015 PF07703 Alpha-2-macroglobulin bait region domain LPH50_09020 PF02583 Metal-sensitive transcriptional repressor LPH50_09025 PF03824 High-affinity nickel-transport protein LPH50_09030 PF07859 alpha/beta hydrolase fold LPH50_09035 PF12833 Helix-turn-helix domain LPH50_09035 PF12852 Cupin LPH50_09050 PF01447 Thermolysin metallopeptidase, catalytic domain LPH50_09050 PF02868 Thermolysin metallopeptidase, alpha-helical domain LPH50_09050 PF16485 Protealysin propeptide LPH50_09055 PF00929 Exonuclease LPH50_09060 PF00924 Mechanosensitive ion channel LPH50_09060 PF05552 Conserved TM helix LPH50_09065 PF00391 PEP-utilising enzyme, mobile domain LPH50_09065 PF02896 PEP-utilising enzyme, TIM barrel domain LPH50_09065 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LPH50_09070 PF03618 Kinase/pyrophosphorylase LPH50_09090 PF04286 Protein of unknown function (DUF445) LPH50_09105 PF04359 Protein of unknown function (DUF493) LPH50_09110 PF03099 Biotin/lipoate A/B protein ligase family LPH50_09115 PF04055 Radical SAM superfamily LPH50_09115 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family LPH50_09145 PF03471 Transporter associated domain LPH50_09145 PF00571 CBS domain LPH50_09145 PF01595 Cyclin M transmembrane N-terminal domain LPH50_09160 PF01751 Toprim domain LPH50_09160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH50_09160 PF00986 DNA gyrase B subunit, carboxyl terminus LPH50_09160 PF00204 DNA gyrase B LPH50_09170 PF00117 Glutamine amidotransferase class-I LPH50_09170 PF06418 CTP synthase N-terminus LPH50_09175 PF00793 DAHP synthetase I family LPH50_09180 PF00113 Enolase, C-terminal TIM barrel domain LPH50_09180 PF03952 Enolase, N-terminal domain LPH50_09185 PF04977 Septum formation initiator LPH50_09190 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LPH50_09195 PF02542 YgbB family LPH50_09200 PF01713 Smr domain LPH50_09225 PF02470 MlaD protein LPH50_09225 PF03886 ABC-type transport auxiliary lipoprotein component LPH50_09230 PF00005 ABC transporter LPH50_09235 PF02405 Permease MlaE LPH50_09310 PF04093 rod shape-determining protein MreD LPH50_09315 PF03717 Penicillin-binding Protein dimerisation domain LPH50_09315 PF00905 Penicillin binding protein transpeptidase domain LPH50_09320 PF01098 Cell cycle protein LPH50_09325 PF02547 Queuosine biosynthesis protein LPH50_09330 PF02824 TGS domain LPH50_09330 PF04607 Region found in RelA / SpoT proteins LPH50_09330 PF13291 ACT domain LPH50_09345 PF03776 Septum formation topological specificity factor MinE LPH50_09350 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LPH50_09355 PF03775 Septum formation inhibitor MinC, C-terminal domain LPH50_09355 PF05209 Septum formation inhibitor MinC, N-terminal domain LPH50_09375 PF00730 HhH-GPD superfamily base excision DNA repair protein LPH50_09385 PF01292 Prokaryotic cytochrome b561 LPH50_09390 PF04264 YceI-like domain LPH50_09395 PF00072 Response regulator receiver domain LPH50_09395 PF09308 LuxQ, periplasmic LPH50_09395 PF00512 His Kinase A (phospho-acceptor) domain LPH50_09395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH50_09405 PF01208 Uroporphyrinogen decarboxylase (URO-D) LPH50_09410 PF01761 3-dehydroquinate synthase LPH50_09415 PF01202 Shikimate kinase LPH50_09420 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LPH50_09420 PF01243 Pyridoxamine 5'-phosphate oxidase LPH50_09430 PF00749 tRNA synthetases class I (E and Q), catalytic domain LPH50_09430 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain LPH50_09440 PF03932 CutC family LPH50_09460 PF00528 Binding-protein-dependent transport system inner membrane component LPH50_09465 PF00528 Binding-protein-dependent transport system inner membrane component LPH50_09470 PF12857 TOBE-like domain LPH50_09470 PF00005 ABC transporter LPH50_09510 PF01381 Helix-turn-helix LPH50_09590 PF10065 Uncharacterized conserved protein (DUF2303) LPH50_09615 PF03979 Sigma-70 factor, region 1.1 LPH50_09615 PF04545 Sigma-70, region 4 LPH50_09615 PF04539 Sigma-70 region 3 LPH50_09615 PF04542 Sigma-70 region 2 LPH50_09615 PF00140 Sigma-70 factor, region 1.2 LPH50_09615 PF04546 Sigma-70, non-essential region LPH50_09625 PF00521 DNA gyrase/topoisomerase IV, subunit A LPH50_09625 PF03989 DNA gyrase C-terminal domain, beta-propeller LPH50_09635 PF02321 Outer membrane efflux protein LPH50_09640 PF00529 HlyD membrane-fusion protein of T1SS LPH50_09640 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LPH50_09645 PF07690 Major Facilitator Superfamily LPH50_09650 PF12697 Alpha/beta hydrolase family LPH50_09655 PF00155 Aminotransferase class I and II LPH50_09665 PF01040 UbiA prenyltransferase family LPH50_09670 PF00753 Metallo-beta-lactamase superfamily LPH50_09675 PF12627 Probable RNA and SrmB- binding site of polymerase A LPH50_09675 PF01743 Poly A polymerase head domain LPH50_09675 PF01966 HD domain LPH50_09680 PF01464 Transglycosylase SLT domain LPH50_09680 PF14718 Soluble lytic murein transglycosylase L domain LPH50_09690 PF02666 Phosphatidylserine decarboxylase LPH50_09745 PF17831 Pyruvate dehydrogenase E1 component middle domain LPH50_09745 PF00456 Transketolase, thiamine diphosphate binding domain LPH50_09750 PF00698 Acyl transferase domain LPH50_09760 PF00550 Phosphopantetheine attachment site LPH50_09765 PF02801 Beta-ketoacyl synthase, C-terminal domain LPH50_09765 PF00109 Beta-ketoacyl synthase, N-terminal domain LPH50_09770 PF00425 chorismate binding enzyme LPH50_09770 PF04715 Anthranilate synthase component I, N terminal region LPH50_09775 PF02618 YceG-like family LPH50_09780 PF09115 DNA polymerase III, delta subunit, C terminal LPH50_09800 PF00459 Inositol monophosphatase family LPH50_09805 PF00588 SpoU rRNA Methylase family LPH50_09810 PF04055 Radical SAM superfamily LPH50_09815 PF09285 Elongation factor P, C-terminal LPH50_09815 PF08207 Elongation factor P (EF-P) KOW-like domain LPH50_09815 PF01132 Elongation factor P (EF-P) OB domain LPH50_09820 PF01979 Amidohydrolase family LPH50_09830 PF13419 Haloacid dehalogenase-like hydrolase LPH50_09840 PF00561 alpha/beta hydrolase fold LPH50_09845 PF08534 Redoxin LPH50_09875 PF00155 Aminotransferase class I and II LPH50_09880 PF00795 Carbon-nitrogen hydrolase LPH50_09890 PF00849 RNA pseudouridylate synthase LPH50_09890 PF01479 S4 domain LPH50_09895 PF04079 Segregation and condensation complex subunit ScpB LPH50_09900 PF02616 Segregation and condensation protein ScpA LPH50_09930 PF00528 Binding-protein-dependent transport system inner membrane component LPH50_09935 PF00528 Binding-protein-dependent transport system inner membrane component LPH50_09950 PF00795 Carbon-nitrogen hydrolase LPH50_09955 PF04371 Porphyromonas-type peptidyl-arginine deiminase LPH50_09965 PF00444 Ribosomal protein L36 LPH50_09970 PF02224 Cytidylate kinase LPH50_09975 PF00575 S1 RNA binding domain LPH50_09980 PF00216 Bacterial DNA-binding protein LPH50_09990 PF18073 Rubredoxin metal binding domain LPH50_09995 PF00953 Glycosyl transferase family 4 LPH50_10000 PF02719 Polysaccharide biosynthesis protein LPH50_10005 PF00483 Nucleotidyl transferase LPH50_10010 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LPH50_10010 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LPH50_10015 PF00571 CBS domain LPH50_10015 PF00478 IMP dehydrogenase / GMP reductase domain LPH50_10020 PF00117 Glutamine amidotransferase class-I LPH50_10020 PF00958 GMP synthase C terminal domain LPH50_10020 PF02540 NAD synthase LPH50_10070 PF09571 XcyI restriction endonuclease LPH50_10085 PF00005 ABC transporter LPH50_10085 PF17760 UvrA interaction domain LPH50_10085 PF17755 UvrA DNA-binding domain LPH50_10090 PF00829 Ribosomal prokaryotic L21 protein LPH50_10095 PF01016 Ribosomal L27 protein LPH50_10100 PF01926 50S ribosome-binding GTPase LPH50_10100 PF01018 GTP1/OBG LPH50_10105 PF01649 Ribosomal protein S20 LPH50_10110 PF03023 Lipid II flippase MurJ LPH50_10115 PF01687 Riboflavin kinase LPH50_10115 PF06574 FAD synthetase LPH50_10120 PF06827 Zinc finger found in FPG and IleRS LPH50_10120 PF08264 Anticodon-binding domain of tRNA LPH50_10120 PF00133 tRNA synthetases class I (I, L, M and V) LPH50_10125 PF01252 Signal peptidase (SPase) II LPH50_10130 PF02401 LytB protein LPH50_10200 PF13091 PLD-like domain LPH50_10200 PF13087 AAA domain LPH50_10205 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) LPH50_10205 PF06594 Haemolysin-type calcium binding protein related domain LPH50_10270 PF00664 ABC transporter transmembrane region LPH50_10270 PF00005 ABC transporter LPH50_10270 PF03412 Peptidase C39 family LPH50_10275 PF00155 Aminotransferase class I and II LPH50_10280 PF01522 Polysaccharide deacetylase LPH50_10285 PF00462 Glutaredoxin LPH50_10300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH50_10300 PF03466 LysR substrate binding domain LPH50_10310 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LPH50_10320 PF00857 Isochorismatase family LPH50_10330 PF00107 Zinc-binding dehydrogenase LPH50_10330 PF08240 Alcohol dehydrogenase GroES-like domain LPH50_10335 PF00107 Zinc-binding dehydrogenase LPH50_10335 PF08240 Alcohol dehydrogenase GroES-like domain LPH50_10355 PF00873 AcrB/AcrD/AcrF family LPH50_10360 PF00873 AcrB/AcrD/AcrF family LPH50_10365 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LPH50_10370 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term LPH50_10370 PF14489 QueF-like protein LPH50_10385 PF00330 Aconitase family (aconitate hydratase) LPH50_10390 PF00694 Aconitase C-terminal domain LPH50_10395 PF00180 Isocitrate/isopropylmalate dehydrogenase LPH50_10410 PF02397 Bacterial sugar transferase LPH50_10425 PF13439 Glycosyltransferase Family 4 LPH50_10425 PF00534 Glycosyl transferases group 1 LPH50_10435 PF01943 Polysaccharide biosynthesis protein LPH50_10450 PF00072 Response regulator receiver domain LPH50_10450 PF00486 Transcriptional regulatory protein, C terminal LPH50_10455 PF05958 tRNA (Uracil-5-)-methyltransferase LPH50_10460 PF01928 CYTH domain LPH50_10465 PF00933 Glycosyl hydrolase family 3 N terminal domain LPH50_10470 PF00156 Phosphoribosyl transferase domain LPH50_10475 PF01048 Phosphorylase superfamily LPH50_10480 PF00313 'Cold-shock' DNA-binding domain LPH50_10490 PF01668 SmpB protein LPH50_10500 PF03658 RnfH family Ubiquitin LPH50_10505 PF04355 SmpA / OmlA family LPH50_10510 PF01475 Ferric uptake regulator family LPH50_10515 PF02463 RecF/RecN/SMC N terminal domain LPH50_10520 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding LPH50_10520 PF01628 HrcA protein C terminal domain LPH50_10525 PF01025 GrpE LPH50_10530 PF00012 Hsp70 protein LPH50_10535 PF01556 DnaJ C terminal domain LPH50_10535 PF00684 DnaJ central domain LPH50_10535 PF00226 DnaJ domain LPH50_10545 PF00072 Response regulator receiver domain LPH50_10545 PF00486 Transcriptional regulatory protein, C terminal LPH50_10550 PF01219 Prokaryotic diacylglycerol kinase LPH50_10555 PF01790 Prolipoprotein diacylglyceryl transferase LPH50_10560 PF00303 Thymidylate synthase LPH50_10565 PF00186 Dihydrofolate reductase LPH50_10570 PF13700 Domain of unknown function (DUF4158) LPH50_10570 PF01526 Tn3 transposase DDE domain LPH50_10580 PF00072 Response regulator receiver domain LPH50_10580 PF00486 Transcriptional regulatory protein, C terminal LPH50_10585 PF13493 Domain of unknown function (DUF4118) LPH50_10585 PF13492 GAF domain LPH50_10585 PF00512 His Kinase A (phospho-acceptor) domain LPH50_10585 PF02702 Osmosensitive K+ channel His kinase sensor domain LPH50_10585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH50_10590 PF02669 K+-transporting ATPase, c chain LPH50_10600 PF03814 Potassium-transporting ATPase A subunit LPH50_10615 PF00149 Calcineurin-like phosphoesterase LPH50_10620 PF04379 ApaG domain LPH50_10625 PF00398 Ribosomal RNA adenine dimethylase LPH50_10630 PF00929 Exonuclease LPH50_10635 PF01895 PhoU domain LPH50_10640 PF00005 ABC transporter LPH50_10645 PF00528 Binding-protein-dependent transport system inner membrane component LPH50_10650 PF00528 Binding-protein-dependent transport system inner membrane component LPH50_10655 PF12849 PBP superfamily domain LPH50_10660 PF02254 TrkA-N domain LPH50_10660 PF00999 Sodium/hydrogen exchanger family LPH50_10665 PF07715 TonB-dependent Receptor Plug Domain LPH50_10665 PF00593 TonB dependent receptor LPH50_10670 PF01323 DSBA-like thioredoxin domain LPH50_10680 PF00005 ABC transporter LPH50_10680 PF12848 ABC transporter LPH50_10695 PF01066 CDP-alcohol phosphatidyltransferase LPH50_10700 PF08459 UvrC Helix-hairpin-helix N-terminal LPH50_10700 PF02151 UvrB/uvrC motif LPH50_10700 PF01541 GIY-YIG catalytic domain LPH50_10705 PF01451 Low molecular weight phosphotyrosine protein phosphatase LPH50_10710 PF02348 Cytidylyltransferase LPH50_10715 PF10609 NUBPL iron-transfer P-loop NTPase LPH50_10720 PF00202 Aminotransferase class-III LPH50_10730 PF00490 Delta-aminolevulinic acid dehydratase LPH50_10740 PF12146 Serine aminopeptidase, S33 LPH50_10755 PF01134 Glucose inhibited division protein A LPH50_10755 PF13932 GidA associated domain LPH50_10775 PF13649 Methyltransferase domain LPH50_10795 PF02649 Type I GTP cyclohydrolase folE2 LPH50_10800 PF00132 Bacterial transferase hexapeptide (six repeats) LPH50_10805 PF00873 AcrB/AcrD/AcrF family LPH50_10810 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LPH50_10810 PF00529 HlyD membrane-fusion protein of T1SS LPH50_10815 PF05088 Bacterial NAD-glutamate dehydrogenase LPH50_10820 PF01513 ATP-NAD kinase LPH50_10840 PF12706 Beta-lactamase superfamily domain LPH50_10850 PF00929 Exonuclease LPH50_10850 PF08411 Exonuclease C-terminal LPH50_10870 PF00999 Sodium/hydrogen exchanger family LPH50_10880 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LPH50_10890 PF01812 5-formyltetrahydrofolate cyclo-ligase family LPH50_10910 PF03695 Uncharacterised protein family (UPF0149) LPH50_10915 PF00557 Metallopeptidase family M24 LPH50_10915 PF05195 Aminopeptidase P, N-terminal domain LPH50_10920 PF00293 NUDIX domain LPH50_10955 PF01063 Amino-transferase class IV LPH50_10970 PF02954 Bacterial regulatory protein, Fis family LPH50_10980 PF01381 Helix-turn-helix LPH50_10995 PF00535 Glycosyl transferase family 2 LPH50_11005 PF00925 GTP cyclohydrolase II LPH50_11015 PF08534 Redoxin LPH50_11040 PF00959 Phage lysozyme LPH50_11060 PF01367 5'-3' exonuclease, C-terminal SAM fold LPH50_11060 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LPH50_11060 PF00476 DNA polymerase family A LPH50_11060 PF01612 3'-5' exonuclease LPH50_11085 PF07963 Prokaryotic N-terminal methylation motif LPH50_11085 PF00114 Pilin (bacterial filament) LPH50_11100 PF16123 Hydroxyacylglutathione hydrolase C-terminus LPH50_11100 PF00753 Metallo-beta-lactamase superfamily LPH50_11110 PF00075 RNase H LPH50_11115 PF00929 Exonuclease LPH50_11135 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LPH50_11145 PF13632 Glycosyl transferase family group 2 LPH50_11150 PF02230 Phospholipase/Carboxylesterase LPH50_11155 PF07694 5TMR of 5TMR-LYT LPH50_11155 PF06580 Histidine kinase LPH50_11160 PF04397 LytTr DNA-binding domain LPH50_11160 PF00072 Response regulator receiver domain LPH50_11165 PF03900 Porphobilinogen deaminase, C-terminal domain LPH50_11165 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LPH50_11180 PF00437 Type II/IV secretion system protein LPH50_11185 PF00437 Type II/IV secretion system protein LPH50_11200 PF00535 Glycosyl transferase family 2 LPH50_11210 PF02801 Beta-ketoacyl synthase, C-terminal domain LPH50_11210 PF00109 Beta-ketoacyl synthase, N-terminal domain LPH50_11225 PF09924 Uncharacterised conserved protein (DUF2156) LPH50_11225 PF03706 Lysylphosphatidylglycerol synthase TM region LPH50_11230 PF01042 Endoribonuclease L-PSP LPH50_11245 PF01430 Hsp33 protein LPH50_11250 PF00912 Transglycosylase LPH50_11255 PF05190 MutS family domain IV LPH50_11255 PF01624 MutS domain I LPH50_11255 PF05188 MutS domain II LPH50_11255 PF05192 MutS domain III LPH50_11255 PF00488 MutS domain V LPH50_11260 PF01168 Alanine racemase, N-terminal domain LPH50_11275 PF08279 HTH domain LPH50_11275 PF02237 Biotin protein ligase C terminal domain LPH50_11275 PF03099 Biotin/lipoate A/B protein ligase family LPH50_11280 PF03309 Type III pantothenate kinase LPH50_11310 PF01183 Glycosyl hydrolases family 25 LPH50_11330 PF01381 Helix-turn-helix LPH50_11340 PF07963 Prokaryotic N-terminal methylation motif LPH50_11340 PF00114 Pilin (bacterial filament) LPH50_11440 PF00589 Phage integrase family LPH50_11455 PF00959 Phage lysozyme LPH50_11470 PF00574 Clp protease LPH50_11510 PF01022 Bacterial regulatory protein, arsR family LPH50_11525 PF00873 AcrB/AcrD/AcrF family LPH50_11550 PF00581 Rhodanese-like domain LPH50_11555 PF02556 Preprotein translocase subunit SecB LPH50_11560 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LPH50_11560 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LPH50_11585 PF12169 DNA polymerase III subunits gamma and tau domain III LPH50_11585 PF12170 DNA polymerase III tau subunit V interacting with alpha LPH50_11590 PF02575 YbaB/EbfC DNA-binding family LPH50_11595 PF13662 Toprim domain LPH50_11595 PF02132 RecR protein LPH50_11600 PF01230 HIT domain LPH50_11610 PF11992 Domain of unknown function (DUF3488) LPH50_11610 PF13559 Domain of unknown function (DUF4129) LPH50_11610 PF01841 Transglutaminase-like superfamily LPH50_11620 PF07726 ATPase family associated with various cellular activities (AAA) LPH50_11620 PF17863 AAA lid domain LPH50_11630 PF02620 Large ribosomal RNA subunit accumulation protein YceD LPH50_11635 PF01783 Ribosomal L32p protein family LPH50_11640 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LPH50_11640 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LPH50_11655 PF01341 Glycosyl hydrolases family 6 LPH50_11655 PF00041 Fibronectin type III domain LPH50_11655 PF00553 Cellulose binding domain LPH50_11660 PF00682 HMGL-like LPH50_11660 PF08502 LeuA allosteric (dimerisation) domain LPH50_11665 PF00291 Pyridoxal-phosphate dependent enzyme LPH50_11675 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LPH50_11675 PF00205 Thiamine pyrophosphate enzyme, central domain LPH50_11675 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LPH50_11680 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LPH50_11680 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LPH50_11685 PF11818 C-terminal domain of tail specific protease (DUF3340) LPH50_11685 PF00595 PDZ domain LPH50_11685 PF03572 Peptidase family S41 LPH50_11685 PF17804 Tail specific protease N-terminal domain LPH50_11690 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family LPH50_11695 PF02566 OsmC-like protein LPH50_11700 PF03969 AFG1-like ATPase LPH50_11705 PF02129 X-Pro dipeptidyl-peptidase (S15 family) LPH50_11710 PF02492 CobW/HypB/UreG, nucleotide-binding domain LPH50_11710 PF07683 Cobalamin synthesis protein cobW C-terminal domain LPH50_11720 PF00551 Formyl transferase LPH50_11730 PF03109 ABC1 family LPH50_11740 PF07055 Enoyl reductase FAD binding domain LPH50_11740 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase LPH50_11740 PF12241 Trans-2-enoyl-CoA reductase catalytic region LPH50_11760 PF00881 Nitroreductase family LPH50_11765 PF04264 YceI-like domain LPH50_11770 PF02673 Bacitracin resistance protein BacA LPH50_11775 PF00120 Glutamine synthetase, catalytic domain LPH50_11775 PF03951 Glutamine synthetase, beta-Grasp domain LPH50_11780 PF00543 Nitrogen regulatory protein P-II LPH50_11785 PF00909 Ammonium Transporter Family LPH50_11800 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LPH50_11800 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LPH50_11805 PF00890 FAD binding domain LPH50_11805 PF02910 Fumarate reductase flavoprotein C-term LPH50_11810 PF02445 Quinolinate synthetase A protein LPH50_11815 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LPH50_11815 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LPH50_11820 PF01026 TatD related DNase LPH50_11905 PF01850 PIN domain