locus-tag class description LPH58_00005 PF00308 Bacterial dnaA protein LPH58_00005 PF08299 Bacterial dnaA protein helix-turn-helix LPH58_00005 PF11638 DnaA N-terminal domain LPH58_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain LPH58_00010 PF02767 DNA polymerase III beta subunit, central domain LPH58_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain LPH58_00015 PF02463 RecF/RecN/SMC N terminal domain LPH58_00020 PF00204 DNA gyrase B LPH58_00020 PF00986 DNA gyrase B subunit, carboxyl terminus LPH58_00020 PF18053 DNA gyrase B subunit insert domain LPH58_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH58_00020 PF01751 Toprim domain LPH58_00030 PF01435 Peptidase family M48 LPH58_00040 PF03544 Gram-negative bacterial TonB protein C-terminal LPH58_00045 PF01618 MotA/TolQ/ExbB proton channel family LPH58_00050 PF02472 Biopolymer transport protein ExbD/TolR LPH58_00055 PF02472 Biopolymer transport protein ExbD/TolR LPH58_00075 PF01218 Coproporphyrinogen III oxidase LPH58_00100 PF00793 DAHP synthetase I family LPH58_00105 PF07963 Prokaryotic N-terminal methylation motif LPH58_00105 PF00114 Pilin (bacterial filament) LPH58_00125 PF05567 Neisseria PilC beta-propeller domain LPH58_00130 PF07963 Prokaryotic N-terminal methylation motif LPH58_00130 PF00114 Pilin (bacterial filament) LPH58_00135 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LPH58_00140 PF00155 Aminotransferase class I and II LPH58_00145 PF01741 Large-conductance mechanosensitive channel, MscL LPH58_00170 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ LPH58_00180 PF02559 CarD-like/TRCF domain LPH58_00180 PF03461 TRCF domain LPH58_00180 PF17757 UvrB interaction domain LPH58_00180 PF00271 Helicase conserved C-terminal domain LPH58_00180 PF00270 DEAD/DEAH box helicase LPH58_00185 PF01220 Dehydroquinase class II LPH58_00190 PF00364 Biotin-requiring enzyme LPH58_00195 PF02785 Biotin carboxylase C-terminal domain LPH58_00195 PF00289 Biotin carboxylase, N-terminal domain LPH58_00195 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LPH58_00200 PF13361 UvrD-like helicase C-terminal domain LPH58_00200 PF00580 UvrD/REP helicase N-terminal domain LPH58_00210 PF00970 Oxidoreductase FAD-binding domain LPH58_00210 PF00042 Globin LPH58_00210 PF00175 Oxidoreductase NAD-binding domain LPH58_00220 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ LPH58_00225 PF02195 ParB-like nuclease domain LPH58_00225 PF06613 KorB C-terminal beta-barrel domain LPH58_00225 PF08535 KorB domain LPH58_00240 PF04055 Radical SAM superfamily LPH58_00240 PF06968 Biotin and Thiamin Synthesis associated domain LPH58_00245 PF01734 Patatin-like phospholipase LPH58_00250 PF01040 UbiA prenyltransferase family LPH58_00270 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family LPH58_00305 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LPH58_00305 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LPH58_00315 PF00448 SRP54-type protein, GTPase domain LPH58_00315 PF02881 SRP54-type protein, helical bundle domain LPH58_00315 PF02978 Signal peptide binding domain LPH58_00335 PF13953 PapC C-terminal domain LPH58_00335 PF13954 PapC N-terminal domain LPH58_00335 PF00577 Outer membrane usher protein LPH58_00340 PF02753 Pili assembly chaperone PapD, C-terminal domain LPH58_00340 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LPH58_00345 PF16970 Type-1 fimbrial protein, A LPH58_00350 PF02464 Competence-damaged protein LPH58_00355 PF00083 Sugar (and other) transporter LPH58_00360 PF01926 50S ribosome-binding GTPase LPH58_00360 PF13167 GTP-binding GTPase N-terminal LPH58_00360 PF16360 GTP-binding GTPase Middle Region LPH58_00365 PF17209 Hfq protein LPH58_00375 PF00809 Pterin binding enzyme LPH58_00380 PF17862 AAA+ lid domain LPH58_00380 PF01434 Peptidase family M41 LPH58_00380 PF00004 ATPase family associated with various cellular activities (AAA) LPH58_00380 PF06480 FtsH Extracellular LPH58_00385 PF01728 FtsJ-like methyltransferase LPH58_00390 PF01985 CRS1 / YhbY (CRM) domain LPH58_00405 PF00920 Dehydratase family LPH58_00435 PF03279 Bacterial lipid A biosynthesis acyltransferase LPH58_00440 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) LPH58_00460 PF00886 Ribosomal protein S16 LPH58_00465 PF05239 PRC-barrel domain LPH58_00465 PF01782 RimM N-terminal domain LPH58_00470 PF01746 tRNA (Guanine-1)-methyltransferase LPH58_00475 PF01245 Ribosomal protein L19 LPH58_00480 PF00557 Metallopeptidase family M24 LPH58_00490 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal LPH58_00490 PF14602 Hexapeptide repeat of succinyl-transferase LPH58_00490 PF00132 Bacterial transferase hexapeptide (six repeats) LPH58_00495 PF03960 ArsC family LPH58_00500 PF01546 Peptidase family M20/M25/M40 LPH58_00500 PF07687 Peptidase dimerisation domain LPH58_00505 PF00733 Asparagine synthase LPH58_00505 PF13537 Glutamine amidotransferase domain LPH58_00515 PF03060 Nitronate monooxygenase LPH58_00525 PF00717 Peptidase S24-like LPH58_00525 PF01726 LexA DNA binding domain LPH58_00530 PF00154 recA bacterial DNA recombination protein LPH58_00535 PF02272 DHHA1 domain LPH58_00535 PF01411 tRNA synthetases class II (A) LPH58_00535 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LPH58_00540 PF02599 Global regulator protein family LPH58_00550 PF01432 Peptidase family M3 LPH58_00565 PF07731 Multicopper oxidase LPH58_00565 PF00394 Multicopper oxidase LPH58_00565 PF07732 Multicopper oxidase LPH58_00570 PF05275 Copper resistance protein B precursor (CopB) LPH58_00575 PF10458 Valyl tRNA synthetase tRNA binding arm LPH58_00575 PF00133 tRNA synthetases class I (I, L, M and V) LPH58_00575 PF08264 Anticodon-binding domain of tRNA LPH58_00595 PF02789 Cytosol aminopeptidase family, N-terminal domain LPH58_00595 PF00883 Cytosol aminopeptidase family, catalytic domain LPH58_00615 PF01380 SIS domain LPH58_00630 PF17284 Spermidine synthase tetramerisation domain LPH58_00635 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LPH58_00635 PF17810 Arginine decarboxylase helical bundle domain LPH58_00635 PF17944 Arginine decarboxylase C-terminal helical extension LPH58_00640 PF00106 short chain dehydrogenase LPH58_00650 PF00750 tRNA synthetases class I (R) LPH58_00650 PF05746 DALR anticodon binding domain LPH58_00650 PF03485 Arginyl tRNA synthetase N terminal domain LPH58_00655 PF04002 RadC-like JAB domain LPH58_00660 PF04127 DNA / pantothenate metabolism flavoprotein LPH58_00660 PF02441 Flavoprotein LPH58_00665 PF00692 dUTPase LPH58_00670 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LPH58_00670 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LPH58_00670 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LPH58_00670 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LPH58_00680 PF00156 Phosphoribosyl transferase domain LPH58_00725 PF07690 Major Facilitator Superfamily LPH58_00730 PF03702 Anhydro-N-acetylmuramic acid kinase LPH58_00735 PF04225 Opacity-associated protein A LysM-like domain LPH58_00735 PF01551 Peptidase family M23 LPH58_00740 PF00579 tRNA synthetases class I (W and Y) LPH58_00770 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LPH58_00770 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LPH58_00800 PF00009 Elongation factor Tu GTP binding domain LPH58_00800 PF16658 Class II release factor RF3, C-terminal domain LPH58_00805 PF03006 Haemolysin-III related LPH58_00810 PF00535 Glycosyl transferase family 2 LPH58_00815 PF01026 TatD related DNase LPH58_00830 PF01597 Glycine cleavage H-protein LPH58_00835 PF08669 Glycine cleavage T-protein C-terminal barrel domain LPH58_00835 PF01571 Aminomethyltransferase folate-binding domain LPH58_00845 PF01145 SPFH domain / Band 7 family LPH58_00845 PF16200 C-terminal region of band_7 LPH58_00850 PF03819 MazG nucleotide pyrophosphohydrolase domain LPH58_00855 PF00459 Inositol monophosphatase family LPH58_00860 PF00293 NUDIX domain LPH58_00865 PF00202 Aminotransferase class-III LPH58_00870 PF04452 RNA methyltransferase LPH58_00880 PF00270 DEAD/DEAH box helicase LPH58_00880 PF00271 Helicase conserved C-terminal domain LPH58_00885 PF01242 6-pyruvoyl tetrahydropterin synthase LPH58_00910 PF03653 Uncharacterised protein family (UPF0093) LPH58_00915 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LPH58_00920 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LPH58_00920 PF01336 OB-fold nucleic acid binding domain LPH58_00920 PF07733 Bacterial DNA polymerase III alpha NTPase domain LPH58_00920 PF02811 PHP domain LPH58_00920 PF14579 Helix-hairpin-helix motif LPH58_00925 PF01259 SAICAR synthetase LPH58_00930 PF00226 DnaJ domain LPH58_00930 PF05099 Tellurite resistance protein TerB LPH58_00935 PF00834 Ribulose-phosphate 3 epimerase family LPH58_00945 PF00425 chorismate binding enzyme LPH58_00945 PF04715 Anthranilate synthase component I, N terminal region LPH58_00950 PF00117 Glutamine amidotransferase class-I LPH58_00955 PF02885 Glycosyl transferase family, helical bundle domain LPH58_00955 PF00591 Glycosyl transferase family, a/b domain LPH58_00960 PF00218 Indole-3-glycerol phosphate synthase LPH58_00975 PF12849 PBP superfamily domain LPH58_00995 PF01321 Creatinase/Prolidase N-terminal domain LPH58_00995 PF00557 Metallopeptidase family M24 LPH58_01010 PF01702 Queuine tRNA-ribosyltransferase LPH58_01015 PF02699 Preprotein translocase subunit LPH58_01020 PF07549 SecD/SecF GG Motif LPH58_01020 PF13721 SecD export protein N-terminal TM region LPH58_01020 PF02355 Protein export membrane protein LPH58_01025 PF02355 Protein export membrane protein LPH58_01025 PF07549 SecD/SecF GG Motif LPH58_01035 PF01743 Poly A polymerase head domain LPH58_01035 PF12627 Probable RNA and SrmB- binding site of polymerase A LPH58_01035 PF12626 Polymerase A arginine-rich C-terminus LPH58_01040 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LPH58_01045 PF02548 Ketopantoate hydroxymethyltransferase LPH58_01050 PF02569 Pantoate-beta-alanine ligase LPH58_01055 PF02261 Aspartate decarboxylase LPH58_01060 PF00342 Phosphoglucose isomerase LPH58_01070 PF02576 RimP N-terminal domain LPH58_01070 PF17384 RimP C-terminal SH3 domain LPH58_01075 PF13184 NusA-like KH domain LPH58_01075 PF08529 NusA N-terminal domain LPH58_01075 PF00575 S1 RNA binding domain LPH58_01080 PF11987 Translation-initiation factor 2 LPH58_01080 PF04760 Translation initiation factor IF-2, N-terminal region LPH58_01080 PF00009 Elongation factor Tu GTP binding domain LPH58_01080 PF08364 Bacterial translation initiation factor IF-2 associated region LPH58_01085 PF02033 Ribosome-binding factor A LPH58_01090 PF09157 Pseudouridine synthase II TruB, C-terminal LPH58_01090 PF16198 tRNA pseudouridylate synthase B C-terminal domain LPH58_01090 PF01509 TruB family pseudouridylate synthase (N terminal domain) LPH58_01095 PF00312 Ribosomal protein S15 LPH58_01100 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LPH58_01100 PF01138 3' exoribonuclease family, domain 1 LPH58_01100 PF00575 S1 RNA binding domain LPH58_01100 PF00013 KH domain LPH58_01100 PF03725 3' exoribonuclease family, domain 2 LPH58_01105 PF01638 HxlR-like helix-turn-helix LPH58_01110 PF05368 NmrA-like family LPH58_01115 PF00873 AcrB/AcrD/AcrF family LPH58_01125 PF00999 Sodium/hydrogen exchanger family LPH58_01145 PF03880 DbpA RNA binding domain LPH58_01145 PF00270 DEAD/DEAH box helicase LPH58_01145 PF00271 Helicase conserved C-terminal domain LPH58_01150 PF00766 Electron transfer flavoprotein FAD-binding domain LPH58_01150 PF01012 Electron transfer flavoprotein domain LPH58_01155 PF01012 Electron transfer flavoprotein domain LPH58_01160 PF16363 GDP-mannose 4,6 dehydratase LPH58_01165 PF00483 Nucleotidyl transferase LPH58_01170 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LPH58_01175 PF04321 RmlD substrate binding domain LPH58_01180 PF01050 Mannose-6-phosphate isomerase LPH58_01180 PF00483 Nucleotidyl transferase LPH58_01185 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LPH58_01185 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LPH58_01185 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LPH58_01185 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LPH58_01230 PF00082 Subtilase family LPH58_01230 PF03797 Autotransporter beta-domain LPH58_01230 PF12951 Passenger-associated-transport-repeat LPH58_01235 PF03797 Autotransporter beta-domain LPH58_01235 PF12951 Passenger-associated-transport-repeat LPH58_01235 PF00082 Subtilase family LPH58_01240 PF06779 Uncharacterised MFS-type transporter YbfB LPH58_01245 PF07669 Eco57I restriction-modification methylase LPH58_01255 PF00365 Phosphofructokinase LPH58_01265 PF08245 Mur ligase middle domain LPH58_01265 PF01225 Mur ligase family, catalytic domain LPH58_01265 PF02875 Mur ligase family, glutamate ligase domain LPH58_01270 PF01569 PAP2 superfamily LPH58_01295 PF00892 EamA-like transporter family LPH58_01300 PF00883 Cytosol aminopeptidase family, catalytic domain LPH58_01300 PF02789 Cytosol aminopeptidase family, N-terminal domain LPH58_01310 PF01594 AI-2E family transporter LPH58_01330 PF00595 PDZ domain LPH58_01335 PF08338 Domain of unknown function (DUF1731) LPH58_01335 PF01370 NAD dependent epimerase/dehydratase family LPH58_01340 PF00501 AMP-binding enzyme LPH58_01340 PF13193 AMP-binding enzyme C-terminal domain LPH58_01345 PF00694 Aconitase C-terminal domain LPH58_01345 PF00330 Aconitase family (aconitate hydratase) LPH58_01360 PF00330 Aconitase family (aconitate hydratase) LPH58_01360 PF06434 Aconitate hydratase 2 N-terminus LPH58_01360 PF11791 Aconitate B N-terminal domain LPH58_01375 PF02384 N-6 DNA Methylase LPH58_01380 PF01420 Type I restriction modification DNA specificity domain LPH58_01395 PF18766 SWI2/SNF2 ATPase LPH58_01395 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LPH58_01395 PF11867 Domain of unknown function (DUF3387) LPH58_01415 PF00121 Triosephosphate isomerase LPH58_01430 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LPH58_01435 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LPH58_01440 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LPH58_01445 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LPH58_01455 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LPH58_01455 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LPH58_01455 PF10531 SLBB domain LPH58_01460 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LPH58_01460 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal LPH58_01460 PF00384 Molybdopterin oxidoreductase LPH58_01465 PF00146 NADH dehydrogenase LPH58_01470 PF12838 4Fe-4S dicluster domain LPH58_01475 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LPH58_01480 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LPH58_01485 PF00361 Proton-conducting membrane transporter LPH58_01485 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LPH58_01490 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus LPH58_01490 PF00361 Proton-conducting membrane transporter LPH58_01495 PF00361 Proton-conducting membrane transporter LPH58_01500 PF00106 short chain dehydrogenase LPH58_01505 PF03600 Citrate transporter LPH58_01515 PF00486 Transcriptional regulatory protein, C terminal LPH58_01515 PF00072 Response regulator receiver domain LPH58_01520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH58_01520 PF00512 His Kinase A (phospho-acceptor) domain LPH58_01520 PF08521 Two-component sensor kinase N-terminal LPH58_01530 PF00196 Bacterial regulatory proteins, luxR family LPH58_01530 PF00072 Response regulator receiver domain LPH58_01535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH58_01535 PF00512 His Kinase A (phospho-acceptor) domain LPH58_01535 PF01627 Hpt domain LPH58_01535 PF00072 Response regulator receiver domain LPH58_01535 PF00672 HAMP domain LPH58_01545 PF00375 Sodium:dicarboxylate symporter family LPH58_01550 PF00390 Malic enzyme, N-terminal domain LPH58_01550 PF03949 Malic enzyme, NAD binding domain LPH58_01550 PF01515 Phosphate acetyl/butaryl transferase LPH58_01555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH58_01555 PF00183 Hsp90 protein LPH58_01565 PF01467 Cytidylyltransferase-like LPH58_01575 PF00037 4Fe-4S binding domain LPH58_01585 PF00990 Diguanylate cyclase, GGDEF domain LPH58_01590 PF01551 Peptidase family M23 LPH58_01590 PF01476 LysM domain LPH58_01595 PF01979 Amidohydrolase family LPH58_01600 PF01809 Putative membrane protein insertion efficiency factor LPH58_01605 PF01258 Prokaryotic dksA/traR C4-type zinc finger LPH58_01630 PF02657 Fe-S metabolism associated domain LPH58_01635 PF01406 tRNA synthetases class I (C) catalytic domain LPH58_01635 PF09190 DALR domain LPH58_01645 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LPH58_01645 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LPH58_01650 PF00764 Arginosuccinate synthase LPH58_01655 PF01546 Peptidase family M20/M25/M40 LPH58_01655 PF07687 Peptidase dimerisation domain LPH58_01660 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase LPH58_01660 PF00696 Amino acid kinase family LPH58_01670 PF01118 Semialdehyde dehydrogenase, NAD binding domain LPH58_01675 PF00206 Lyase LPH58_01685 PF00696 Amino acid kinase family LPH58_01685 PF01472 PUA domain LPH58_01690 PF00171 Aldehyde dehydrogenase family LPH58_01700 PF02796 Helix-turn-helix domain of resolvase LPH58_01700 PF00239 Resolvase, N terminal domain LPH58_01725 PF00239 Resolvase, N terminal domain LPH58_01725 PF02796 Helix-turn-helix domain of resolvase LPH58_01740 PF13700 Domain of unknown function (DUF4158) LPH58_01740 PF01526 Tn3 transposase DDE domain LPH58_01770 PF03524 Conjugal transfer protein LPH58_01810 PF01593 Flavin containing amine oxidoreductase LPH58_01820 PF02627 Carboxymuconolactone decarboxylase family LPH58_01840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH58_01840 PF03466 LysR substrate binding domain LPH58_01845 PF05016 ParE toxin of type II toxin-antitoxin system, parDE LPH58_01850 PF09386 Antitoxin ParD LPH58_01855 PF02796 Helix-turn-helix domain of resolvase LPH58_01855 PF00239 Resolvase, N terminal domain LPH58_01880 PF02796 Helix-turn-helix domain of resolvase LPH58_01880 PF00239 Resolvase, N terminal domain LPH58_01920 PF06594 Haemolysin-type calcium binding protein related domain LPH58_01920 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) LPH58_01925 PF14437 MafB19-like deaminase LPH58_01930 PF01325 Iron dependent repressor, N-terminal DNA binding domain LPH58_01930 PF02742 Iron dependent repressor, metal binding and dimerisation domain LPH58_01935 PF01566 Natural resistance-associated macrophage protein LPH58_01950 PF04376 Arginine-tRNA-protein transferase, N terminus LPH58_01950 PF04377 Arginine-tRNA-protein transferase, C terminus LPH58_01985 PF12951 Passenger-associated-transport-repeat LPH58_01985 PF00082 Subtilase family LPH58_01985 PF03797 Autotransporter beta-domain LPH58_02015 PF01553 Acyltransferase LPH58_02030 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain LPH58_02030 PF05221 S-adenosyl-L-homocysteine hydrolase LPH58_02045 PF01351 Ribonuclease HII LPH58_02050 PF02684 Lipid-A-disaccharide synthetase LPH58_02055 PF00132 Bacterial transferase hexapeptide (six repeats) LPH58_02055 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LPH58_02060 PF07977 FabA-like domain LPH58_02065 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LPH58_02065 PF00132 Bacterial transferase hexapeptide (six repeats) LPH58_02070 PF01103 Surface antigen LPH58_02070 PF07244 Surface antigen variable number repeat LPH58_02075 PF02163 Peptidase family M50 LPH58_02075 PF17820 PDZ domain LPH58_02080 PF13288 DXP reductoisomerase C-terminal domain LPH58_02080 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LPH58_02080 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LPH58_02090 PF01255 Putative undecaprenyl diphosphate synthase LPH58_02095 PF01765 Ribosome recycling factor LPH58_02125 PF04305 Protein of unknown function (DUF455) LPH58_02130 PF00696 Amino acid kinase family LPH58_02205 PF01081 KDPG and KHG aldolase LPH58_02210 PF00920 Dehydratase family LPH58_02215 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LPH58_02220 PF02685 Glucokinase LPH58_02225 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LPH58_02225 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LPH58_02230 PF17912 MalK OB fold domain LPH58_02230 PF00005 ABC transporter LPH58_02245 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LPH58_02250 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LPH58_02255 PF02910 Fumarate reductase flavoprotein C-term LPH58_02255 PF00890 FAD binding domain LPH58_02260 PF13237 4Fe-4S dicluster domain LPH58_02260 PF13085 2Fe-2S iron-sulfur cluster binding domain LPH58_02265 PF03937 Flavinator of succinate dehydrogenase LPH58_02275 PF12704 MacB-like periplasmic core domain LPH58_02275 PF02687 FtsX-like permease family LPH58_02280 PF00005 ABC transporter LPH58_02285 PF03772 Competence protein LPH58_02285 PF00753 Metallo-beta-lactamase superfamily LPH58_02300 PF00664 ABC transporter transmembrane region LPH58_02300 PF00005 ABC transporter LPH58_02305 PF02606 Tetraacyldisaccharide-1-P 4'-kinase LPH58_02310 PF01883 Iron-sulfur cluster assembly protein LPH58_02310 PF10609 NUBPL iron-transfer P-loop NTPase LPH58_02325 PF13091 PLD-like domain LPH58_02350 PF03358 NADPH-dependent FMN reductase LPH58_02355 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LPH58_02355 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LPH58_02370 PF01300 Telomere recombination LPH58_02375 PF01751 Toprim domain LPH58_02375 PF13368 Topoisomerase C-terminal repeat LPH58_02375 PF01131 DNA topoisomerase LPH58_02385 PF04361 Protein of unknown function (DUF494) LPH58_02390 PF17782 DprA winged helix domain LPH58_02390 PF02481 DNA recombination-mediator protein A LPH58_02400 PF01327 Polypeptide deformylase LPH58_02405 PF00551 Formyl transferase LPH58_02405 PF02911 Formyl transferase, C-terminal domain LPH58_02410 PF01029 NusB family LPH58_02410 PF01189 16S rRNA methyltransferase RsmB/F LPH58_02415 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase LPH58_02430 PF00114 Pilin (bacterial filament) LPH58_02430 PF07963 Prokaryotic N-terminal methylation motif LPH58_02550 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LPH58_02550 PF01612 3'-5' exonuclease LPH58_02550 PF01367 5'-3' exonuclease, C-terminal SAM fold LPH58_02550 PF00476 DNA polymerase family A LPH58_02555 PF05173 Dihydrodipicolinate reductase, C-terminus LPH58_02555 PF01113 Dihydrodipicolinate reductase, N-terminus LPH58_02560 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LPH58_02560 PF00117 Glutamine amidotransferase class-I LPH58_02565 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LPH58_02565 PF02142 MGS-like domain LPH58_02565 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LPH58_02570 PF03449 Transcription elongation factor, N-terminal LPH58_02570 PF01272 Transcription elongation factor, GreA/GreB, C-term LPH58_02580 PF02272 DHHA1 domain LPH58_02580 PF01368 DHH family LPH58_02580 PF17768 RecJ OB domain LPH58_02590 PF00152 tRNA synthetases class II (D, K and N) LPH58_02590 PF01336 OB-fold nucleic acid binding domain LPH58_02595 PF00072 Response regulator receiver domain LPH58_02600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH58_02600 PF00512 His Kinase A (phospho-acceptor) domain LPH58_02600 PF01627 Hpt domain LPH58_02600 PF00072 Response regulator receiver domain LPH58_02605 PF00378 Enoyl-CoA hydratase/isomerase LPH58_02610 PF00696 Amino acid kinase family LPH58_02610 PF01842 ACT domain LPH58_02620 PF08245 Mur ligase middle domain LPH58_02640 PF00293 NUDIX domain LPH58_02650 PF02219 Methylenetetrahydrofolate reductase LPH58_02660 PF02545 Maf-like protein LPH58_02665 PF10150 Ribonuclease E/G family LPH58_02665 PF00575 S1 RNA binding domain LPH58_02675 PF01523 Putative modulator of DNA gyrase LPH58_02680 PF04751 Protein of unknown function (DUF615) LPH58_02685 PF01523 Putative modulator of DNA gyrase LPH58_02695 PF17761 DUF1016 N-terminal domain LPH58_02695 PF06250 YhcG PDDEXK nuclease domain LPH58_02715 PF03466 LysR substrate binding domain LPH58_02715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH58_02720 PF03358 NADPH-dependent FMN reductase LPH58_02730 PF00107 Zinc-binding dehydrogenase LPH58_02730 PF08240 Alcohol dehydrogenase GroES-like domain LPH58_02745 PF00248 Aldo/keto reductase family LPH58_02760 PF14602 Hexapeptide repeat of succinyl-transferase LPH58_02760 PF00132 Bacterial transferase hexapeptide (six repeats) LPH58_02760 PF12804 MobA-like NTP transferase domain LPH58_02770 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LPH58_02770 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LPH58_02775 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LPH58_02775 PF02874 ATP synthase alpha/beta family, beta-barrel domain LPH58_02780 PF00231 ATP synthase LPH58_02785 PF02874 ATP synthase alpha/beta family, beta-barrel domain LPH58_02785 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LPH58_02785 PF00306 ATP synthase alpha/beta chain, C terminal domain LPH58_02790 PF00213 ATP synthase delta (OSCP) subunit LPH58_02795 PF00430 ATP synthase B/B' CF(0) LPH58_02800 PF00137 ATP synthase subunit C LPH58_02805 PF00119 ATP synthase A chain LPH58_02815 PF00338 Ribosomal protein S10p/S20e LPH58_02820 PF00297 Ribosomal protein L3 LPH58_02825 PF00573 Ribosomal protein L4/L1 family LPH58_02830 PF00276 Ribosomal protein L23 LPH58_02835 PF03947 Ribosomal Proteins L2, C-terminal domain LPH58_02835 PF00181 Ribosomal Proteins L2, RNA binding domain LPH58_02840 PF00203 Ribosomal protein S19 LPH58_02845 PF00237 Ribosomal protein L22p/L17e LPH58_02850 PF00189 Ribosomal protein S3, C-terminal domain LPH58_02850 PF07650 KH domain LPH58_02855 PF00252 Ribosomal protein L16p/L10e LPH58_02860 PF00831 Ribosomal L29 protein LPH58_02865 PF00366 Ribosomal protein S17 LPH58_02870 PF00238 Ribosomal protein L14p/L23e LPH58_02875 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LPH58_02875 PF00467 KOW motif LPH58_02880 PF00673 ribosomal L5P family C-terminus LPH58_02880 PF00281 Ribosomal protein L5 LPH58_02885 PF00253 Ribosomal protein S14p/S29e LPH58_02890 PF00410 Ribosomal protein S8 LPH58_02895 PF00347 Ribosomal protein L6 LPH58_02900 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LPH58_02905 PF03719 Ribosomal protein S5, C-terminal domain LPH58_02905 PF00333 Ribosomal protein S5, N-terminal domain LPH58_02910 PF00327 Ribosomal protein L30p/L7e LPH58_02915 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LPH58_02920 PF00344 SecY translocase LPH58_02925 PF00416 Ribosomal protein S13/S18 LPH58_02930 PF00411 Ribosomal protein S11 LPH58_02935 PF01479 S4 domain LPH58_02935 PF00163 Ribosomal protein S4/S9 N-terminal domain LPH58_02940 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LPH58_02940 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LPH58_02940 PF01000 RNA polymerase Rpb3/RpoA insert domain LPH58_02945 PF01196 Ribosomal protein L17 LPH58_02950 PF04380 Membrane fusogenic activity LPH58_02955 PF01078 Magnesium chelatase, subunit ChlI LPH58_02955 PF13335 Magnesium chelatase, subunit ChlI C-terminal LPH58_02960 PF00561 alpha/beta hydrolase fold LPH58_02975 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LPH58_02975 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LPH58_02975 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LPH58_02990 PF05697 Bacterial trigger factor protein (TF) LPH58_02990 PF05698 Bacterial trigger factor protein (TF) C-terminus LPH58_02995 PF00574 Clp protease LPH58_03000 PF06689 ClpX C4-type zinc finger LPH58_03000 PF10431 C-terminal, D2-small domain, of ClpB protein LPH58_03000 PF07724 AAA domain (Cdc48 subfamily) LPH58_03005 PF02190 ATP-dependent protease La (LON) substrate-binding domain LPH58_03005 PF05362 Lon protease (S16) C-terminal proteolytic domain LPH58_03005 PF00004 ATPase family associated with various cellular activities (AAA) LPH58_03010 PF00216 Bacterial DNA-binding protein LPH58_03035 PF00317 Ribonucleotide reductase, all-alpha domain LPH58_03035 PF03477 ATP cone domain LPH58_03035 PF02867 Ribonucleotide reductase, barrel domain LPH58_03040 PF00268 Ribonucleotide reductase, small chain LPH58_03065 PF01479 S4 domain LPH58_03065 PF00849 RNA pseudouridylate synthase LPH58_03070 PF13419 Haloacid dehalogenase-like hydrolase LPH58_03080 PF00830 Ribosomal L28 family LPH58_03085 PF00471 Ribosomal protein L33 LPH58_03090 PF13396 Phospholipase_D-nuclease N-terminal LPH58_03090 PF13091 PLD-like domain LPH58_03105 PF07963 Prokaryotic N-terminal methylation motif LPH58_03105 PF00114 Pilin (bacterial filament) LPH58_03125 PF01612 3'-5' exonuclease LPH58_03125 PF00476 DNA polymerase family A LPH58_03125 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LPH58_03125 PF01367 5'-3' exonuclease, C-terminal SAM fold LPH58_03145 PF00959 Phage lysozyme LPH58_03165 PF01555 DNA methylase LPH58_03185 PF00043 Glutathione S-transferase, C-terminal domain LPH58_03185 PF02798 Glutathione S-transferase, N-terminal domain LPH58_03190 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LPH58_03190 PF00056 lactate/malate dehydrogenase, NAD binding domain LPH58_03195 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LPH58_03200 PF00679 Elongation factor G C-terminus LPH58_03200 PF03144 Elongation factor Tu domain 2 LPH58_03200 PF00009 Elongation factor Tu GTP binding domain LPH58_03215 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LPH58_03215 PF00529 HlyD membrane-fusion protein of T1SS LPH58_03240 PF03412 Peptidase C39 family LPH58_03240 PF00664 ABC transporter transmembrane region LPH58_03240 PF00005 ABC transporter LPH58_03245 PF01061 ABC-2 type transporter LPH58_03250 PF00005 ABC transporter LPH58_03255 PF05567 Neisseria PilC beta-propeller domain LPH58_03270 PF00270 DEAD/DEAH box helicase LPH58_03270 PF04408 Helicase associated domain (HA2) LPH58_03270 PF00271 Helicase conserved C-terminal domain LPH58_03270 PF08482 ATP-dependent helicase C-terminal LPH58_03280 PF13185 GAF domain LPH58_03285 PF01103 Surface antigen LPH58_03285 PF17243 POTRA domain TamA domain 1 LPH58_03290 PF04357 TamB, inner membrane protein subunit of TAM complex LPH58_03305 PF00285 Citrate synthase, C-terminal domain LPH58_03310 PF00694 Aconitase C-terminal domain LPH58_03310 PF00330 Aconitase family (aconitate hydratase) LPH58_03315 PF04303 PrpF protein LPH58_03335 PF17962 Bacterial macroglobulin domain 6 LPH58_03335 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain LPH58_03335 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain LPH58_03335 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain LPH58_03335 PF07703 Alpha-2-macroglobulin bait region domain LPH58_03335 PF00207 Alpha-2-macroglobulin family LPH58_03335 PF01835 MG2 domain LPH58_03335 PF11974 Bacterial alpha-2-macroglobulin MG3 domain LPH58_03340 PF02583 Metal-sensitive transcriptional repressor LPH58_03345 PF03824 High-affinity nickel-transport protein LPH58_03350 PF07859 alpha/beta hydrolase fold LPH58_03355 PF12833 Helix-turn-helix domain LPH58_03355 PF12852 Cupin LPH58_03370 PF16485 Protealysin propeptide LPH58_03370 PF02868 Thermolysin metallopeptidase, alpha-helical domain LPH58_03370 PF01447 Thermolysin metallopeptidase, catalytic domain LPH58_03375 PF00929 Exonuclease LPH58_03380 PF05552 Conserved TM helix LPH58_03380 PF00924 Mechanosensitive ion channel LPH58_03385 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LPH58_03385 PF02896 PEP-utilising enzyme, TIM barrel domain LPH58_03385 PF00391 PEP-utilising enzyme, mobile domain LPH58_03390 PF03618 Kinase/pyrophosphorylase LPH58_03410 PF04286 Protein of unknown function (DUF445) LPH58_03425 PF04359 Protein of unknown function (DUF493) LPH58_03430 PF03099 Biotin/lipoate A/B protein ligase family LPH58_03435 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family LPH58_03435 PF04055 Radical SAM superfamily LPH58_03465 PF00571 CBS domain LPH58_03465 PF03471 Transporter associated domain LPH58_03465 PF01595 Cyclin M transmembrane N-terminal domain LPH58_03480 PF00204 DNA gyrase B LPH58_03480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH58_03480 PF01751 Toprim domain LPH58_03480 PF00986 DNA gyrase B subunit, carboxyl terminus LPH58_03490 PF06418 CTP synthase N-terminus LPH58_03490 PF00117 Glutamine amidotransferase class-I LPH58_03495 PF00793 DAHP synthetase I family LPH58_03500 PF00113 Enolase, C-terminal TIM barrel domain LPH58_03500 PF03952 Enolase, N-terminal domain LPH58_03505 PF04977 Septum formation initiator LPH58_03510 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LPH58_03515 PF02542 YgbB family LPH58_03520 PF01713 Smr domain LPH58_03545 PF02470 MlaD protein LPH58_03545 PF03886 ABC-type transport auxiliary lipoprotein component LPH58_03550 PF00005 ABC transporter LPH58_03555 PF02405 Permease MlaE LPH58_03630 PF04093 rod shape-determining protein MreD LPH58_03635 PF00905 Penicillin binding protein transpeptidase domain LPH58_03635 PF03717 Penicillin-binding Protein dimerisation domain LPH58_03640 PF01098 Cell cycle protein LPH58_03645 PF02547 Queuosine biosynthesis protein LPH58_03650 PF04607 Region found in RelA / SpoT proteins LPH58_03650 PF02824 TGS domain LPH58_03650 PF13291 ACT domain LPH58_03665 PF03776 Septum formation topological specificity factor MinE LPH58_03670 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LPH58_03675 PF05209 Septum formation inhibitor MinC, N-terminal domain LPH58_03675 PF03775 Septum formation inhibitor MinC, C-terminal domain LPH58_03695 PF00730 HhH-GPD superfamily base excision DNA repair protein LPH58_03705 PF01292 Prokaryotic cytochrome b561 LPH58_03710 PF04264 YceI-like domain LPH58_03715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH58_03715 PF00512 His Kinase A (phospho-acceptor) domain LPH58_03715 PF09308 LuxQ, periplasmic LPH58_03715 PF00072 Response regulator receiver domain LPH58_03725 PF01208 Uroporphyrinogen decarboxylase (URO-D) LPH58_03730 PF01761 3-dehydroquinate synthase LPH58_03735 PF01202 Shikimate kinase LPH58_03740 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LPH58_03740 PF01243 Pyridoxamine 5'-phosphate oxidase LPH58_03750 PF00749 tRNA synthetases class I (E and Q), catalytic domain LPH58_03750 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain LPH58_03760 PF03932 CutC family LPH58_03780 PF00528 Binding-protein-dependent transport system inner membrane component LPH58_03785 PF00528 Binding-protein-dependent transport system inner membrane component LPH58_03790 PF12857 TOBE-like domain LPH58_03790 PF00005 ABC transporter LPH58_03830 PF01381 Helix-turn-helix LPH58_03905 PF10065 Uncharacterized conserved protein (DUF2303) LPH58_03930 PF04545 Sigma-70, region 4 LPH58_03930 PF04539 Sigma-70 region 3 LPH58_03930 PF04542 Sigma-70 region 2 LPH58_03930 PF00140 Sigma-70 factor, region 1.2 LPH58_03930 PF03979 Sigma-70 factor, region 1.1 LPH58_03930 PF04546 Sigma-70, non-essential region LPH58_03935 PF00521 DNA gyrase/topoisomerase IV, subunit A LPH58_03935 PF03989 DNA gyrase C-terminal domain, beta-propeller LPH58_03945 PF02321 Outer membrane efflux protein LPH58_03950 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LPH58_03950 PF00529 HlyD membrane-fusion protein of T1SS LPH58_03955 PF07690 Major Facilitator Superfamily LPH58_03960 PF12697 Alpha/beta hydrolase family LPH58_03965 PF00155 Aminotransferase class I and II LPH58_03975 PF01040 UbiA prenyltransferase family LPH58_03980 PF00753 Metallo-beta-lactamase superfamily LPH58_03985 PF12627 Probable RNA and SrmB- binding site of polymerase A LPH58_03985 PF01743 Poly A polymerase head domain LPH58_03985 PF01966 HD domain LPH58_03990 PF01464 Transglycosylase SLT domain LPH58_03990 PF14718 Soluble lytic murein transglycosylase L domain LPH58_04000 PF02666 Phosphatidylserine decarboxylase LPH58_04055 PF00456 Transketolase, thiamine diphosphate binding domain LPH58_04055 PF17831 Pyruvate dehydrogenase E1 component middle domain LPH58_04060 PF00698 Acyl transferase domain LPH58_04070 PF00550 Phosphopantetheine attachment site LPH58_04075 PF00109 Beta-ketoacyl synthase, N-terminal domain LPH58_04075 PF02801 Beta-ketoacyl synthase, C-terminal domain LPH58_04080 PF00425 chorismate binding enzyme LPH58_04080 PF04715 Anthranilate synthase component I, N terminal region LPH58_04085 PF02618 YceG-like family LPH58_04090 PF09115 DNA polymerase III, delta subunit, C terminal LPH58_04110 PF00459 Inositol monophosphatase family LPH58_04115 PF00588 SpoU rRNA Methylase family LPH58_04120 PF04055 Radical SAM superfamily LPH58_04125 PF08207 Elongation factor P (EF-P) KOW-like domain LPH58_04125 PF09285 Elongation factor P, C-terminal LPH58_04125 PF01132 Elongation factor P (EF-P) OB domain LPH58_04130 PF01979 Amidohydrolase family LPH58_04140 PF13419 Haloacid dehalogenase-like hydrolase LPH58_04150 PF00561 alpha/beta hydrolase fold LPH58_04155 PF08534 Redoxin LPH58_04185 PF00155 Aminotransferase class I and II LPH58_04190 PF00795 Carbon-nitrogen hydrolase LPH58_04200 PF00849 RNA pseudouridylate synthase LPH58_04200 PF01479 S4 domain LPH58_04205 PF04079 Segregation and condensation complex subunit ScpB LPH58_04210 PF02616 Segregation and condensation protein ScpA LPH58_04240 PF00528 Binding-protein-dependent transport system inner membrane component LPH58_04245 PF00528 Binding-protein-dependent transport system inner membrane component LPH58_04260 PF00795 Carbon-nitrogen hydrolase LPH58_04265 PF04371 Porphyromonas-type peptidyl-arginine deiminase LPH58_04275 PF00444 Ribosomal protein L36 LPH58_04280 PF02224 Cytidylate kinase LPH58_04285 PF00575 S1 RNA binding domain LPH58_04290 PF00216 Bacterial DNA-binding protein LPH58_04300 PF18073 Rubredoxin metal binding domain LPH58_04305 PF00953 Glycosyl transferase family 4 LPH58_04310 PF02719 Polysaccharide biosynthesis protein LPH58_04315 PF00483 Nucleotidyl transferase LPH58_04320 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LPH58_04320 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LPH58_04325 PF00478 IMP dehydrogenase / GMP reductase domain LPH58_04325 PF00571 CBS domain LPH58_04330 PF02540 NAD synthase LPH58_04330 PF00958 GMP synthase C terminal domain LPH58_04330 PF00117 Glutamine amidotransferase class-I LPH58_04380 PF09571 XcyI restriction endonuclease LPH58_04395 PF00005 ABC transporter LPH58_04395 PF17760 UvrA interaction domain LPH58_04395 PF17755 UvrA DNA-binding domain LPH58_04400 PF00829 Ribosomal prokaryotic L21 protein LPH58_04405 PF01016 Ribosomal L27 protein LPH58_04410 PF01926 50S ribosome-binding GTPase LPH58_04410 PF01018 GTP1/OBG LPH58_04415 PF01649 Ribosomal protein S20 LPH58_04420 PF03023 Lipid II flippase MurJ LPH58_04425 PF01687 Riboflavin kinase LPH58_04425 PF06574 FAD synthetase LPH58_04430 PF06827 Zinc finger found in FPG and IleRS LPH58_04430 PF00133 tRNA synthetases class I (I, L, M and V) LPH58_04430 PF08264 Anticodon-binding domain of tRNA LPH58_04435 PF01252 Signal peptidase (SPase) II LPH58_04440 PF02401 LytB protein LPH58_04510 PF13087 AAA domain LPH58_04510 PF13091 PLD-like domain LPH58_04515 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) LPH58_04515 PF06594 Haemolysin-type calcium binding protein related domain LPH58_04580 PF00664 ABC transporter transmembrane region LPH58_04580 PF00005 ABC transporter LPH58_04580 PF03412 Peptidase C39 family LPH58_04585 PF00155 Aminotransferase class I and II LPH58_04590 PF01522 Polysaccharide deacetylase LPH58_04595 PF00462 Glutaredoxin LPH58_04605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH58_04605 PF03466 LysR substrate binding domain LPH58_04615 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LPH58_04625 PF00857 Isochorismatase family LPH58_04635 PF08240 Alcohol dehydrogenase GroES-like domain LPH58_04635 PF00107 Zinc-binding dehydrogenase LPH58_04640 PF08240 Alcohol dehydrogenase GroES-like domain LPH58_04640 PF00107 Zinc-binding dehydrogenase LPH58_04660 PF00873 AcrB/AcrD/AcrF family LPH58_04665 PF00873 AcrB/AcrD/AcrF family LPH58_04670 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LPH58_04675 PF14489 QueF-like protein LPH58_04675 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term LPH58_04690 PF00330 Aconitase family (aconitate hydratase) LPH58_04695 PF00694 Aconitase C-terminal domain LPH58_04700 PF00180 Isocitrate/isopropylmalate dehydrogenase LPH58_04715 PF02397 Bacterial sugar transferase LPH58_04730 PF13439 Glycosyltransferase Family 4 LPH58_04730 PF00534 Glycosyl transferases group 1 LPH58_04740 PF01943 Polysaccharide biosynthesis protein LPH58_04755 PF00486 Transcriptional regulatory protein, C terminal LPH58_04755 PF00072 Response regulator receiver domain LPH58_04760 PF05958 tRNA (Uracil-5-)-methyltransferase LPH58_04765 PF01928 CYTH domain LPH58_04770 PF00933 Glycosyl hydrolase family 3 N terminal domain LPH58_04775 PF00156 Phosphoribosyl transferase domain LPH58_04780 PF01048 Phosphorylase superfamily LPH58_04785 PF00313 'Cold-shock' DNA-binding domain LPH58_04795 PF01668 SmpB protein LPH58_04805 PF03658 RnfH family Ubiquitin LPH58_04810 PF04355 SmpA / OmlA family LPH58_04815 PF01475 Ferric uptake regulator family LPH58_04820 PF02463 RecF/RecN/SMC N terminal domain LPH58_04825 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding LPH58_04825 PF01628 HrcA protein C terminal domain LPH58_04830 PF01025 GrpE LPH58_04835 PF00012 Hsp70 protein LPH58_04840 PF01556 DnaJ C terminal domain LPH58_04840 PF00684 DnaJ central domain LPH58_04840 PF00226 DnaJ domain LPH58_04850 PF00486 Transcriptional regulatory protein, C terminal LPH58_04850 PF00072 Response regulator receiver domain LPH58_04855 PF01219 Prokaryotic diacylglycerol kinase LPH58_04860 PF01790 Prolipoprotein diacylglyceryl transferase LPH58_04865 PF00303 Thymidylate synthase LPH58_04870 PF00186 Dihydrofolate reductase LPH58_04875 PF13700 Domain of unknown function (DUF4158) LPH58_04875 PF01526 Tn3 transposase DDE domain LPH58_04885 PF00072 Response regulator receiver domain LPH58_04885 PF00486 Transcriptional regulatory protein, C terminal LPH58_04890 PF00512 His Kinase A (phospho-acceptor) domain LPH58_04890 PF13492 GAF domain LPH58_04890 PF02702 Osmosensitive K+ channel His kinase sensor domain LPH58_04890 PF13493 Domain of unknown function (DUF4118) LPH58_04890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH58_04895 PF02669 K+-transporting ATPase, c chain LPH58_04905 PF03814 Potassium-transporting ATPase A subunit LPH58_04920 PF00149 Calcineurin-like phosphoesterase LPH58_04925 PF04379 ApaG domain LPH58_04930 PF00398 Ribosomal RNA adenine dimethylase LPH58_04935 PF00929 Exonuclease LPH58_04940 PF01895 PhoU domain LPH58_04945 PF00005 ABC transporter LPH58_04950 PF00528 Binding-protein-dependent transport system inner membrane component LPH58_04955 PF00528 Binding-protein-dependent transport system inner membrane component LPH58_04960 PF12849 PBP superfamily domain LPH58_04965 PF00999 Sodium/hydrogen exchanger family LPH58_04965 PF02254 TrkA-N domain LPH58_04970 PF00593 TonB dependent receptor LPH58_04970 PF07715 TonB-dependent Receptor Plug Domain LPH58_04975 PF01323 DSBA-like thioredoxin domain LPH58_04985 PF12848 ABC transporter LPH58_04985 PF00005 ABC transporter LPH58_05000 PF01066 CDP-alcohol phosphatidyltransferase LPH58_05005 PF01541 GIY-YIG catalytic domain LPH58_05005 PF02151 UvrB/uvrC motif LPH58_05005 PF08459 UvrC Helix-hairpin-helix N-terminal LPH58_05010 PF01451 Low molecular weight phosphotyrosine protein phosphatase LPH58_05015 PF02348 Cytidylyltransferase LPH58_05020 PF10609 NUBPL iron-transfer P-loop NTPase LPH58_05025 PF00202 Aminotransferase class-III LPH58_05035 PF00490 Delta-aminolevulinic acid dehydratase LPH58_05045 PF12146 Serine aminopeptidase, S33 LPH58_05060 PF13932 GidA associated domain LPH58_05060 PF01134 Glucose inhibited division protein A LPH58_05080 PF13649 Methyltransferase domain LPH58_05100 PF02649 Type I GTP cyclohydrolase folE2 LPH58_05105 PF00132 Bacterial transferase hexapeptide (six repeats) LPH58_05110 PF00873 AcrB/AcrD/AcrF family LPH58_05115 PF00529 HlyD membrane-fusion protein of T1SS LPH58_05115 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LPH58_05120 PF05088 Bacterial NAD-glutamate dehydrogenase LPH58_05125 PF01513 ATP-NAD kinase LPH58_05145 PF12706 Beta-lactamase superfamily domain LPH58_05155 PF08411 Exonuclease C-terminal LPH58_05155 PF00929 Exonuclease LPH58_05175 PF00999 Sodium/hydrogen exchanger family LPH58_05185 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LPH58_05195 PF01812 5-formyltetrahydrofolate cyclo-ligase family LPH58_05215 PF03695 Uncharacterised protein family (UPF0149) LPH58_05220 PF00557 Metallopeptidase family M24 LPH58_05220 PF05195 Aminopeptidase P, N-terminal domain LPH58_05225 PF00293 NUDIX domain LPH58_05260 PF01063 Amino-transferase class IV LPH58_05275 PF02954 Bacterial regulatory protein, Fis family LPH58_05285 PF01381 Helix-turn-helix LPH58_05300 PF00535 Glycosyl transferase family 2 LPH58_05310 PF00925 GTP cyclohydrolase II LPH58_05320 PF08534 Redoxin LPH58_05345 PF00959 Phage lysozyme LPH58_05365 PF01367 5'-3' exonuclease, C-terminal SAM fold LPH58_05365 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LPH58_05365 PF00476 DNA polymerase family A LPH58_05365 PF01612 3'-5' exonuclease LPH58_05390 PF07963 Prokaryotic N-terminal methylation motif LPH58_05390 PF00114 Pilin (bacterial filament) LPH58_05405 PF00753 Metallo-beta-lactamase superfamily LPH58_05405 PF16123 Hydroxyacylglutathione hydrolase C-terminus LPH58_05415 PF00075 RNase H LPH58_05420 PF00929 Exonuclease LPH58_05440 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LPH58_05450 PF13632 Glycosyl transferase family group 2 LPH58_05455 PF02230 Phospholipase/Carboxylesterase LPH58_05460 PF06580 Histidine kinase LPH58_05460 PF07694 5TMR of 5TMR-LYT LPH58_05465 PF00072 Response regulator receiver domain LPH58_05465 PF04397 LytTr DNA-binding domain LPH58_05470 PF03900 Porphobilinogen deaminase, C-terminal domain LPH58_05470 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LPH58_05485 PF00437 Type II/IV secretion system protein LPH58_05490 PF00437 Type II/IV secretion system protein LPH58_05505 PF00535 Glycosyl transferase family 2 LPH58_05515 PF02801 Beta-ketoacyl synthase, C-terminal domain LPH58_05515 PF00109 Beta-ketoacyl synthase, N-terminal domain LPH58_05530 PF03706 Lysylphosphatidylglycerol synthase TM region LPH58_05530 PF09924 Uncharacterised conserved protein (DUF2156) LPH58_05535 PF01042 Endoribonuclease L-PSP LPH58_05550 PF01430 Hsp33 protein LPH58_05555 PF00912 Transglycosylase LPH58_05560 PF00488 MutS domain V LPH58_05560 PF05190 MutS family domain IV LPH58_05560 PF05192 MutS domain III LPH58_05560 PF05188 MutS domain II LPH58_05560 PF01624 MutS domain I LPH58_05565 PF01168 Alanine racemase, N-terminal domain LPH58_05580 PF08279 HTH domain LPH58_05580 PF02237 Biotin protein ligase C terminal domain LPH58_05580 PF03099 Biotin/lipoate A/B protein ligase family LPH58_05585 PF03309 Type III pantothenate kinase LPH58_05615 PF01183 Glycosyl hydrolases family 25 LPH58_05635 PF01381 Helix-turn-helix LPH58_05650 PF07963 Prokaryotic N-terminal methylation motif LPH58_05650 PF00114 Pilin (bacterial filament) LPH58_05750 PF00589 Phage integrase family LPH58_05765 PF00959 Phage lysozyme LPH58_05780 PF00574 Clp protease LPH58_05820 PF01022 Bacterial regulatory protein, arsR family LPH58_05835 PF00873 AcrB/AcrD/AcrF family LPH58_05860 PF00581 Rhodanese-like domain LPH58_05865 PF02556 Preprotein translocase subunit SecB LPH58_05870 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LPH58_05870 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LPH58_05895 PF12169 DNA polymerase III subunits gamma and tau domain III LPH58_05895 PF12170 DNA polymerase III tau subunit V interacting with alpha LPH58_05900 PF02575 YbaB/EbfC DNA-binding family LPH58_05905 PF13662 Toprim domain LPH58_05905 PF02132 RecR protein LPH58_05910 PF01230 HIT domain LPH58_05920 PF11992 Domain of unknown function (DUF3488) LPH58_05920 PF13559 Domain of unknown function (DUF4129) LPH58_05920 PF01841 Transglutaminase-like superfamily LPH58_05930 PF07726 ATPase family associated with various cellular activities (AAA) LPH58_05930 PF17863 AAA lid domain LPH58_05940 PF02620 Large ribosomal RNA subunit accumulation protein YceD LPH58_05945 PF01783 Ribosomal L32p protein family LPH58_05950 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LPH58_05950 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LPH58_05965 PF00553 Cellulose binding domain LPH58_05965 PF00041 Fibronectin type III domain LPH58_05965 PF01341 Glycosyl hydrolases family 6 LPH58_05970 PF08502 LeuA allosteric (dimerisation) domain LPH58_05970 PF00682 HMGL-like LPH58_05975 PF00291 Pyridoxal-phosphate dependent enzyme LPH58_05985 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LPH58_05985 PF00205 Thiamine pyrophosphate enzyme, central domain LPH58_05985 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LPH58_05990 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LPH58_05990 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LPH58_05995 PF17804 Tail specific protease N-terminal domain LPH58_05995 PF03572 Peptidase family S41 LPH58_05995 PF00595 PDZ domain LPH58_05995 PF11818 C-terminal domain of tail specific protease (DUF3340) LPH58_06000 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family LPH58_06005 PF02566 OsmC-like protein LPH58_06010 PF03969 AFG1-like ATPase LPH58_06015 PF02129 X-Pro dipeptidyl-peptidase (S15 family) LPH58_06020 PF02492 CobW/HypB/UreG, nucleotide-binding domain LPH58_06020 PF07683 Cobalamin synthesis protein cobW C-terminal domain LPH58_06030 PF00551 Formyl transferase LPH58_06040 PF03109 ABC1 family LPH58_06050 PF12241 Trans-2-enoyl-CoA reductase catalytic region LPH58_06050 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase LPH58_06050 PF07055 Enoyl reductase FAD binding domain LPH58_06070 PF00881 Nitroreductase family LPH58_06075 PF04264 YceI-like domain LPH58_06080 PF02673 Bacitracin resistance protein BacA LPH58_06085 PF03951 Glutamine synthetase, beta-Grasp domain LPH58_06085 PF00120 Glutamine synthetase, catalytic domain LPH58_06090 PF00543 Nitrogen regulatory protein P-II LPH58_06095 PF00909 Ammonium Transporter Family LPH58_06110 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LPH58_06110 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LPH58_06115 PF00890 FAD binding domain LPH58_06115 PF02910 Fumarate reductase flavoprotein C-term LPH58_06120 PF02445 Quinolinate synthetase A protein LPH58_06125 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LPH58_06125 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LPH58_06130 PF01026 TatD related DNase LPH58_06215 PF01850 PIN domain LPH58_06225 PF00300 Histidine phosphatase superfamily (branch 1) LPH58_06230 PF10459 Peptidase S46 LPH58_06235 PF01964 Radical SAM ThiC family LPH58_06235 PF13667 ThiC-associated domain LPH58_06240 PF00175 Oxidoreductase NAD-binding domain LPH58_06240 PF00970 Oxidoreductase FAD-binding domain LPH58_06245 PF00255 Glutathione peroxidase LPH58_06250 PF00854 POT family LPH58_06255 PF04493 Endonuclease V LPH58_06260 PF00300 Histidine phosphatase superfamily (branch 1) LPH58_06265 PF04055 Radical SAM superfamily LPH58_06275 PF00691 OmpA family LPH58_06280 PF07676 WD40-like Beta Propeller Repeat LPH58_06280 PF04052 TolB amino-terminal domain LPH58_06290 PF02472 Biopolymer transport protein ExbD/TolR LPH58_06295 PF01618 MotA/TolQ/ExbB proton channel family LPH58_06300 PF03061 Thioesterase superfamily LPH58_06305 PF17864 RuvB AAA lid domain LPH58_06305 PF05491 RuvB C-terminal winged helix domain LPH58_06305 PF05496 Holliday junction DNA helicase RuvB P-loop domain LPH58_06310 PF02705 K+ potassium transporter LPH58_06315 PF07499 RuvA, C-terminal domain LPH58_06315 PF01330 RuvA N terminal domain LPH58_06320 PF02075 Crossover junction endodeoxyribonuclease RuvC LPH58_06325 PF01709 Transcriptional regulator LPH58_06335 PF04362 Bacterial Fe(2+) trafficking LPH58_06340 PF00730 HhH-GPD superfamily base excision DNA repair protein LPH58_06340 PF14815 NUDIX domain LPH58_06340 PF00633 Helix-hairpin-helix motif LPH58_06345 PF00448 SRP54-type protein, GTPase domain LPH58_06345 PF02881 SRP54-type protein, helical bundle domain LPH58_06370 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ LPH58_06375 PF04221 RelB antitoxin LPH58_06450 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system LPH58_06505 PF06508 Queuosine biosynthesis protein QueC LPH58_06510 PF00152 tRNA synthetases class II (D, K and N) LPH58_06510 PF02938 GAD domain LPH58_06510 PF01336 OB-fold nucleic acid binding domain LPH58_06530 PF05681 Fumarate hydratase (Fumerase) LPH58_06530 PF05683 Fumarase C-terminus LPH58_06550 PF01648 4'-phosphopantetheinyl transferase superfamily LPH58_06555 PF02527 rRNA small subunit methyltransferase G LPH58_06560 PF02779 Transketolase, pyrimidine binding domain LPH58_06560 PF00456 Transketolase, thiamine diphosphate binding domain LPH58_06560 PF02780 Transketolase, C-terminal domain LPH58_06565 PF00375 Sodium:dicarboxylate symporter family LPH58_06575 PF01625 Peptide methionine sulfoxide reductase LPH58_06590 PF01432 Peptidase family M3 LPH58_06595 PF06903 VirK protein LPH58_06600 PF08245 Mur ligase middle domain LPH58_06600 PF02875 Mur ligase family, glutamate ligase domain LPH58_06615 PF00156 Phosphoribosyl transferase domain LPH58_06625 PF01339 CheB methylesterase LPH58_06625 PF00072 Response regulator receiver domain LPH58_06630 PF01584 CheW-like domain LPH58_06630 PF02895 Signal transducing histidine kinase, homodimeric domain LPH58_06630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH58_06630 PF01627 Hpt domain LPH58_06630 PF00072 Response regulator receiver domain LPH58_06635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LPH58_06635 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LPH58_06640 PF01584 CheW-like domain LPH58_06645 PF00072 Response regulator receiver domain LPH58_06650 PF02951 Prokaryotic glutathione synthetase, N-terminal domain LPH58_06650 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain LPH58_06665 PF02092 Glycyl-tRNA synthetase beta subunit LPH58_06665 PF05746 DALR anticodon binding domain LPH58_06670 PF02091 Glycyl-tRNA synthetase alpha subunit LPH58_06675 PF00795 Carbon-nitrogen hydrolase LPH58_06675 PF02540 NAD synthase LPH58_06700 PF03692 Putative zinc- or iron-chelating domain LPH58_06710 PF00561 alpha/beta hydrolase fold LPH58_06720 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LPH58_06720 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LPH58_06730 PF00588 SpoU rRNA Methylase family LPH58_06740 PF01808 AICARFT/IMPCHase bienzyme LPH58_06740 PF02142 MGS-like domain LPH58_06745 PF02843 Phosphoribosylglycinamide synthetase, C domain LPH58_06745 PF02844 Phosphoribosylglycinamide synthetase, N domain LPH58_06745 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LPH58_06765 PF12805 FUSC-like inner membrane protein yccS LPH58_06775 PF03186 CobD/Cbib protein LPH58_06780 PF03895 YadA-like membrane anchor domain LPH58_06780 PF05658 Head domain of trimeric autotransporter adhesin LPH58_06780 PF05662 Coiled stalk of trimeric autotransporter adhesin LPH58_06785 PF01227 GTP cyclohydrolase I LPH58_06790 PF00132 Bacterial transferase hexapeptide (six repeats) LPH58_06795 PF08032 RNA 2'-O ribose methyltransferase substrate binding LPH58_06795 PF00588 SpoU rRNA Methylase family LPH58_06800 PF00773 RNB domain LPH58_06800 PF08461 Ribonuclease R winged-helix domain LPH58_06800 PF00575 S1 RNA binding domain LPH58_06800 PF08206 Ribonuclease B OB domain LPH58_06800 PF17876 Cold shock domain LPH58_06810 PF00959 Phage lysozyme LPH58_06880 PF02129 X-Pro dipeptidyl-peptidase (S15 family) LPH58_06885 PF07690 Major Facilitator Superfamily LPH58_06890 PF03466 LysR substrate binding domain LPH58_06890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH58_06905 PF01161 Phosphatidylethanolamine-binding protein LPH58_06910 PF00719 Inorganic pyrophosphatase LPH58_06915 PF00085 Thioredoxin LPH58_06925 PF13603 Leucyl-tRNA synthetase, Domain 2 LPH58_06925 PF08264 Anticodon-binding domain of tRNA LPH58_06925 PF00133 tRNA synthetases class I (I, L, M and V) LPH58_06940 PF01467 Cytidylyltransferase-like LPH58_06955 PF13406 Transglycosylase SLT domain LPH58_06960 PF05036 Sporulation related domain LPH58_06960 PF03330 Lytic transglycolase LPH58_07065 PF04829 Pre-toxin domain with VENN motif LPH58_07065 PF05860 haemagglutination activity domain LPH58_07065 PF13332 Hemagglutinin repeat LPH58_07065 PF15605 Bacterial toxin 28 LPH58_07095 PF13332 Hemagglutinin repeat LPH58_07095 PF05860 haemagglutination activity domain LPH58_07095 PF04829 Pre-toxin domain with VENN motif LPH58_07100 PF04829 Pre-toxin domain with VENN motif LPH58_07100 PF05860 haemagglutination activity domain LPH58_07100 PF13332 Hemagglutinin repeat LPH58_07100 PF13018 Extended Signal Peptide of Type V secretion system LPH58_07195 PF04829 Pre-toxin domain with VENN motif LPH58_07195 PF15605 Bacterial toxin 28 LPH58_07195 PF05860 haemagglutination activity domain LPH58_07195 PF04829 Pre-toxin domain with VENN motif LPH58_07195 PF05860 haemagglutination activity domain LPH58_07195 PF15605 Bacterial toxin 28 LPH58_07195 PF13332 Hemagglutinin repeat LPH58_07195 PF13332 Hemagglutinin repeat LPH58_07200 PF04829 Pre-toxin domain with VENN motif LPH58_07200 PF05860 haemagglutination activity domain LPH58_07200 PF13332 Hemagglutinin repeat LPH58_07200 PF13018 Extended Signal Peptide of Type V secretion system LPH58_07215 PF01810 LysE type translocator LPH58_07240 PF01132 Elongation factor P (EF-P) OB domain LPH58_07240 PF08207 Elongation factor P (EF-P) KOW-like domain LPH58_07240 PF09285 Elongation factor P, C-terminal LPH58_07245 PF02913 FAD linked oxidases, C-terminal domain LPH58_07245 PF01565 FAD binding domain LPH58_07250 PF01842 ACT domain LPH58_07250 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LPH58_07250 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LPH58_07255 PF13520 Amino acid permease LPH58_07260 PF13520 Amino acid permease LPH58_07265 PF00596 Class II Aldolase and Adducin N-terminal domain LPH58_07270 PF03079 ARD/ARD' family LPH58_07300 PF01502 Phosphoribosyl-AMP cyclohydrolase LPH58_07300 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LPH58_07305 PF00977 Histidine biosynthesis protein LPH58_07310 PF00977 Histidine biosynthesis protein LPH58_07315 PF00117 Glutamine amidotransferase class-I LPH58_07320 PF00475 Imidazoleglycerol-phosphate dehydratase LPH58_07325 PF00155 Aminotransferase class I and II LPH58_07330 PF00815 Histidinol dehydrogenase LPH58_07335 PF01634 ATP phosphoribosyltransferase LPH58_07335 PF08029 HisG, C-terminal domain LPH58_07350 PF03129 Anticodon binding domain LPH58_07350 PF13393 Histidyl-tRNA synthetase LPH58_07355 PF14821 Threonine synthase N terminus LPH58_07355 PF00291 Pyridoxal-phosphate dependent enzyme LPH58_07360 PF00288 GHMP kinases N terminal domain LPH58_07360 PF08544 GHMP kinases C terminal LPH58_07365 PF00742 Homoserine dehydrogenase LPH58_07365 PF13840 ACT domain LPH58_07365 PF03447 Homoserine dehydrogenase, NAD binding domain LPH58_07365 PF01842 ACT domain LPH58_07365 PF00696 Amino acid kinase family LPH58_07375 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LPH58_07375 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LPH58_07380 PF03652 Holliday junction resolvase LPH58_07385 PF02622 Uncharacterized ACR, COG1678 LPH58_07390 PF00768 D-alanyl-D-alanine carboxypeptidase LPH58_07390 PF07943 Penicillin-binding protein 5, C-terminal domain LPH58_07395 PF00141 Peroxidase LPH58_07400 PF01556 DnaJ C terminal domain LPH58_07400 PF00226 DnaJ domain LPH58_07410 PF06832 Penicillin-Binding Protein C-terminus Family LPH58_07410 PF00912 Transglycosylase LPH58_07410 PF00905 Penicillin binding protein transpeptidase domain LPH58_07415 PF07715 TonB-dependent Receptor Plug Domain LPH58_07415 PF00593 TonB dependent receptor LPH58_07435 PF04542 Sigma-70 region 2 LPH58_07435 PF08281 Sigma-70, region 4 LPH58_07445 PF13180 PDZ domain LPH58_07450 PF03144 Elongation factor Tu domain 2 LPH58_07450 PF00009 Elongation factor Tu GTP binding domain LPH58_07450 PF00679 Elongation factor G C-terminus LPH58_07450 PF06421 GTP-binding protein LepA C-terminus LPH58_07455 PF10502 Signal peptidase, peptidase S26 LPH58_07465 PF00035 Double-stranded RNA binding motif LPH58_07465 PF14622 Ribonuclease-III-like LPH58_07470 PF07650 KH domain LPH58_07470 PF01926 50S ribosome-binding GTPase LPH58_07475 PF02565 Recombination protein O C terminal LPH58_07475 PF11967 Recombination protein O N terminal LPH58_07480 PF02779 Transketolase, pyrimidine binding domain LPH58_07480 PF02780 Transketolase, C-terminal domain LPH58_07480 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LPH58_07490 PF00474 Sodium:solute symporter family LPH58_07500 PF13193 AMP-binding enzyme C-terminal domain LPH58_07500 PF00501 AMP-binding enzyme LPH58_07500 PF16177 Acetyl-coenzyme A synthetase N-terminus LPH58_07505 PF02659 Putative manganese efflux pump LPH58_07510 PF00106 short chain dehydrogenase LPH58_07525 PF13360 PQQ-like domain LPH58_07530 PF07676 WD40-like Beta Propeller Repeat LPH58_07530 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region LPH58_07530 PF00326 Prolyl oligopeptidase family LPH58_07535 PF03169 OPT oligopeptide transporter protein LPH58_07540 PF01266 FAD dependent oxidoreductase LPH58_07540 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LPH58_07545 PF00230 Major intrinsic protein LPH58_07550 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LPH58_07550 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LPH58_07565 PF08267 Cobalamin-independent synthase, N-terminal domain LPH58_07565 PF01717 Cobalamin-independent synthase, Catalytic domain LPH58_07570 PF02677 Epoxyqueuosine reductase QueH LPH58_07580 PF00501 AMP-binding enzyme LPH58_07590 PF00535 Glycosyl transferase family 2 LPH58_07595 PF01370 NAD dependent epimerase/dehydratase family LPH58_07600 PF17762 HTH domain found in ParB protein LPH58_07600 PF02195 ParB-like nuclease domain LPH58_07605 PF13614 AAA domain LPH58_07620 PF02403 Seryl-tRNA synthetase N-terminal domain LPH58_07620 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LPH58_07625 PF03544 Gram-negative bacterial TonB protein C-terminal LPH58_07630 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LPH58_07635 PF00800 Prephenate dehydratase LPH58_07635 PF01817 Chorismate mutase type II LPH58_07635 PF01842 ACT domain LPH58_07640 PF00266 Aminotransferase class-V LPH58_07650 PF12679 ABC-2 family transporter protein LPH58_07655 PF00005 ABC transporter LPH58_07685 PF00440 Bacterial regulatory proteins, tetR family LPH58_07690 PF01209 ubiE/COQ5 methyltransferase family LPH58_07700 PF00294 pfkB family carbohydrate kinase LPH58_07705 PF07690 Major Facilitator Superfamily LPH58_07715 PF04102 SlyX LPH58_07720 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LPH58_07720 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LPH58_07720 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LPH58_07725 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LPH58_07725 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LPH58_07730 PF00255 Glutathione peroxidase LPH58_07740 PF00005 ABC transporter LPH58_07755 PF10415 Fumarase C C-terminus LPH58_07755 PF00206 Lyase LPH58_07760 PF00206 Lyase LPH58_07760 PF08328 Adenylosuccinate lyase C-terminal LPH58_07765 PF08007 Cupin superfamily protein LPH58_07770 PF02779 Transketolase, pyrimidine binding domain LPH58_07770 PF00676 Dehydrogenase E1 component LPH58_07770 PF16078 2-oxoglutarate dehydrogenase N-terminus LPH58_07770 PF16870 2-oxoglutarate dehydrogenase C-terminal LPH58_07775 PF00364 Biotin-requiring enzyme LPH58_07775 PF02817 e3 binding domain LPH58_07775 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LPH58_07780 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPH58_07780 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LPH58_07790 PF00899 ThiF family LPH58_07805 PF00027 Cyclic nucleotide-binding domain LPH58_07805 PF00325 Bacterial regulatory proteins, crp family LPH58_07810 PF02675 S-adenosylmethionine decarboxylase LPH58_07815 PF03232 Ubiquinone biosynthesis protein COQ7 LPH58_07820 PF00572 Ribosomal protein L13 LPH58_07825 PF00380 Ribosomal protein S9/S16 LPH58_07830 PF00285 Citrate synthase, C-terminal domain LPH58_07835 PF01197 Ribosomal protein L31 LPH58_07840 PF00814 Glycoprotease family LPH58_07845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH58_07845 PF03466 LysR substrate binding domain LPH58_07850 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPH58_07850 PF13192 Thioredoxin domain LPH58_07855 PF10417 C-terminal domain of 1-Cys peroxiredoxin LPH58_07855 PF00578 AhpC/TSA family LPH58_07860 PF13018 Extended Signal Peptide of Type V secretion system LPH58_07860 PF03895 YadA-like membrane anchor domain LPH58_07860 PF05658 Head domain of trimeric autotransporter adhesin LPH58_07860 PF05662 Coiled stalk of trimeric autotransporter adhesin LPH58_07865 PF00263 Bacterial type II and III secretion system protein LPH58_07865 PF03958 Bacterial type II/III secretion system short domain LPH58_07875 PF10741 Type II secretion system (T2SS), protein M subtype b LPH58_07880 PF05137 Fimbrial assembly protein (PilN) LPH58_07885 PF03934 Type II secretion system (T2SS), protein K LPH58_07895 PF03934 Type II secretion system (T2SS), protein K LPH58_07905 PF07963 Prokaryotic N-terminal methylation motif LPH58_07910 PF12019 Type II transport protein GspH LPH58_07915 PF08334 Type II secretion system (T2SS), protein G LPH58_07920 PF00482 Type II secretion system (T2SS), protein F LPH58_07925 PF00437 Type II/IV secretion system protein LPH58_07925 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LPH58_07945 PF17827 PrmC N-terminal domain LPH58_07945 PF05175 Methyltransferase small domain LPH58_07955 PF00561 alpha/beta hydrolase fold LPH58_07970 PF04055 Radical SAM superfamily LPH58_07970 PF06969 HemN C-terminal domain LPH58_07975 PF01725 Ham1 family LPH58_07980 PF03725 3' exoribonuclease family, domain 2 LPH58_07980 PF01138 3' exoribonuclease family, domain 1 LPH58_07985 PF03755 YicC-like family, N-terminal region LPH58_07985 PF08340 Domain of unknown function (DUF1732) LPH58_07990 PF00625 Guanylate kinase LPH58_07995 PF01192 RNA polymerase Rpb6 LPH58_08000 PF00009 Elongation factor Tu GTP binding domain LPH58_08005 PF01507 Phosphoadenosine phosphosulfate reductase family LPH58_08010 PF00175 Oxidoreductase NAD-binding domain LPH58_08010 PF00667 FAD binding domain LPH58_08010 PF00258 Flavodoxin LPH58_08015 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LPH58_08015 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LPH58_08020 PF01507 Phosphoadenosine phosphosulfate reductase family LPH58_08045 PF13369 Transglutaminase-like superfamily LPH58_08075 PF11838 ERAP1-like C-terminal domain LPH58_08075 PF01433 Peptidase family M1 domain LPH58_08080 PF01209 ubiE/COQ5 methyltransferase family LPH58_08090 PF00004 ATPase family associated with various cellular activities (AAA) LPH58_08090 PF07724 AAA domain (Cdc48 subfamily) LPH58_08090 PF10431 C-terminal, D2-small domain, of ClpB protein LPH58_08095 PF00227 Proteasome subunit LPH58_08105 PF02899 Phage integrase, N-terminal SAM-like domain LPH58_08105 PF00589 Phage integrase family LPH58_08115 PF01678 Diaminopimelate epimerase LPH58_08125 PF00326 Prolyl oligopeptidase family LPH58_08125 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LPH58_08135 PF02082 Transcriptional regulator LPH58_08140 PF01458 Uncharacterized protein family (UPF0051) LPH58_08145 PF00005 ABC transporter LPH58_08150 PF01458 Uncharacterized protein family (UPF0051) LPH58_08155 PF00266 Aminotransferase class-V LPH58_08160 PF00355 Rieske [2Fe-2S] domain LPH58_08165 PF13439 Glycosyltransferase Family 4 LPH58_08165 PF00534 Glycosyl transferases group 1 LPH58_08170 PF01522 Polysaccharide deacetylase LPH58_08175 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LPH58_08175 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LPH58_08175 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LPH58_08175 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LPH58_08180 PF17848 Acetyl-coA carboxylase zinc finger domain LPH58_08180 PF01039 Carboxyl transferase domain LPH58_08200 PF01979 Amidohydrolase family LPH58_08205 PF01380 SIS domain LPH58_08215 PF07690 Major Facilitator Superfamily LPH58_08225 PF02685 Glucokinase LPH58_08250 PF00512 His Kinase A (phospho-acceptor) domain LPH58_08250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH58_08265 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LPH58_08270 PF16193 AAA C-terminal domain LPH58_08270 PF12002 MgsA AAA+ ATPase C terminal LPH58_08270 PF00004 ATPase family associated with various cellular activities (AAA) LPH58_08275 PF03548 Outer membrane lipoprotein carrier protein LolA LPH58_08290 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LPH58_08290 PF17854 FtsK alpha domain LPH58_08290 PF09397 Ftsk gamma domain LPH58_08290 PF01580 FtsK/SpoIIIE family LPH58_08295 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPH58_08305 PF03588 Leucyl/phenylalanyl-tRNA protein transferase LPH58_08310 PF01176 Translation initiation factor 1A / IF-1 LPH58_08315 PF07724 AAA domain (Cdc48 subfamily) LPH58_08315 PF17871 AAA lid domain LPH58_08315 PF02861 Clp amino terminal domain, pathogenicity island component LPH58_08315 PF10431 C-terminal, D2-small domain, of ClpB protein LPH58_08315 PF00004 ATPase family associated with various cellular activities (AAA) LPH58_08320 PF02617 ATP-dependent Clp protease adaptor protein ClpS LPH58_08325 PF00293 NUDIX domain LPH58_08335 PF04356 Protein of unknown function (DUF489) LPH58_08350 PF01323 DSBA-like thioredoxin domain LPH58_08360 PF01926 50S ribosome-binding GTPase LPH58_08365 PF04107 Glutamate-cysteine ligase family 2(GCS2) LPH58_08375 PF00202 Aminotransferase class-III LPH58_08380 PF00027 Cyclic nucleotide-binding domain LPH58_08380 PF00520 Ion transport protein LPH58_08385 PF00589 Phage integrase family LPH58_08385 PF02899 Phage integrase, N-terminal SAM-like domain LPH58_08390 PF13098 Thioredoxin-like domain LPH58_08390 PF10411 Disulfide bond isomerase protein N-terminus LPH58_08395 PF02769 AIR synthase related protein, C-terminal domain LPH58_08395 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal LPH58_08395 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LPH58_08405 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LPH58_08415 PF00571 CBS domain LPH58_08415 PF01380 SIS domain LPH58_08435 PF00005 ABC transporter LPH58_08435 PF12399 Branched-chain amino acid ATP-binding cassette transporter LPH58_08440 PF00309 Sigma-54 factor, Activator interacting domain (AID) LPH58_08440 PF04963 Sigma-54 factor, core binding domain LPH58_08440 PF04552 Sigma-54, DNA binding domain LPH58_08445 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LPH58_08450 PF07475 HPr Serine kinase C-terminal domain LPH58_08450 PF02603 HPr Serine kinase N terminus LPH58_08455 PF03668 P-loop ATPase protein family LPH58_08465 PF00381 PTS HPr component phosphorylation site LPH58_08470 PF05524 PEP-utilising enzyme, N-terminal LPH58_08470 PF00391 PEP-utilising enzyme, mobile domain LPH58_08470 PF02896 PEP-utilising enzyme, TIM barrel domain LPH58_08475 PF00571 CBS domain LPH58_08475 PF01769 Divalent cation transporter LPH58_08475 PF03448 MgtE intracellular N domain LPH58_08480 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LPH58_08515 PF04542 Sigma-70 region 2 LPH58_08515 PF08281 Sigma-70, region 4 LPH58_08525 PF00082 Subtilase family LPH58_08535 PF00436 Single-strand binding protein family LPH58_08540 PF00348 Polyprenyl synthetase LPH58_08545 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LPH58_08545 PF06481 COX Aromatic Rich Motif LPH58_08550 PF00115 Cytochrome C and Quinol oxidase polypeptide I LPH58_08555 PF00510 Cytochrome c oxidase subunit III LPH58_08560 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LPH58_08565 PF02347 Glycine cleavage system P-protein LPH58_08575 PF00270 DEAD/DEAH box helicase LPH58_08575 PF11898 Domain of unknown function (DUF3418) LPH58_08575 PF04408 Helicase associated domain (HA2) LPH58_08575 PF00271 Helicase conserved C-terminal domain LPH58_08575 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LPH58_08580 PF00210 Ferritin-like domain LPH58_08585 PF00270 DEAD/DEAH box helicase LPH58_08585 PF00271 Helicase conserved C-terminal domain LPH58_08585 PF16124 RecQ zinc-binding LPH58_08585 PF09382 RQC domain LPH58_08585 PF00570 HRDC domain LPH58_08605 PF00296 Luciferase-like monooxygenase LPH58_08610 PF18073 Rubredoxin metal binding domain LPH58_08620 PF00290 Tryptophan synthase alpha chain LPH58_08625 PF00291 Pyridoxal-phosphate dependent enzyme LPH58_08635 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LPH58_08640 PF01416 tRNA pseudouridine synthase LPH58_08650 PF01118 Semialdehyde dehydrogenase, NAD binding domain LPH58_08650 PF02774 Semialdehyde dehydrogenase, dimerisation domain LPH58_08660 PF01264 Chorismate synthase LPH58_08665 PF05175 Methyltransferase small domain LPH58_08675 PF06594 Haemolysin-type calcium binding protein related domain LPH58_08675 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) LPH58_08730 PF00348 Polyprenyl synthetase LPH58_08735 PF02609 Exonuclease VII small subunit LPH58_08740 PF09179 TilS substrate binding domain LPH58_08740 PF01171 PP-loop family LPH58_08740 PF11734 TilS substrate C-terminal domain LPH58_08750 PF00375 Sodium:dicarboxylate symporter family LPH58_08755 PF00877 NlpC/P60 family LPH58_08760 PF00877 NlpC/P60 family LPH58_08765 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LPH58_08770 PF04235 Protein of unknown function (DUF418) LPH58_08795 PF10576 Iron-sulfur binding domain of endonuclease III LPH58_08795 PF00633 Helix-hairpin-helix motif LPH58_08795 PF00730 HhH-GPD superfamily base excision DNA repair protein LPH58_08810 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LPH58_08810 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LPH58_08815 PF00293 NUDIX domain LPH58_08840 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LPH58_08840 PF01488 Shikimate / quinate 5-dehydrogenase LPH58_08840 PF08501 Shikimate dehydrogenase substrate binding domain LPH58_08845 PF08543 Phosphomethylpyrimidine kinase LPH58_08845 PF02581 Thiamine monophosphate synthase LPH58_08865 PF11412 Disulphide bond corrector protein DsbC LPH58_08865 PF02683 Cytochrome C biogenesis protein transmembrane region LPH58_08870 PF03091 CutA1 divalent ion tolerance protein LPH58_08875 PF00166 Chaperonin 10 Kd subunit LPH58_08880 PF00118 TCP-1/cpn60 chaperonin family LPH58_08905 PF01370 NAD dependent epimerase/dehydratase family LPH58_08910 PF01370 NAD dependent epimerase/dehydratase family LPH58_08915 PF16363 GDP-mannose 4,6 dehydratase LPH58_08930 PF00291 Pyridoxal-phosphate dependent enzyme LPH58_08950 PF07715 TonB-dependent Receptor Plug Domain LPH58_08950 PF00593 TonB dependent receptor LPH58_08955 PF13640 2OG-Fe(II) oxygenase superfamily LPH58_08955 PF18331 PKHD-type hydroxylase C-terminal domain LPH58_08975 PF02424 ApbE family LPH58_08980 PF00667 FAD binding domain LPH58_08980 PF00258 Flavodoxin LPH58_08980 PF00175 Oxidoreductase NAD-binding domain LPH58_08990 PF01636 Phosphotransferase enzyme family LPH58_08995 PF00483 Nucleotidyl transferase LPH58_09000 PF00308 Bacterial dnaA protein LPH58_09005 PF01594 AI-2E family transporter LPH58_09015 PF00586 AIR synthase related protein, N-terminal domain LPH58_09015 PF02769 AIR synthase related protein, C-terminal domain LPH58_09020 PF00551 Formyl transferase LPH58_09035 PF02223 Thymidylate kinase LPH58_09040 PF01431 Peptidase family M13 LPH58_09040 PF05649 Peptidase family M13 LPH58_09045 PF07977 FabA-like domain LPH58_09050 PF01171 PP-loop family LPH58_09055 PF04381 Putative exonuclease, RdgC LPH58_09065 PF00762 Ferrochelatase LPH58_09075 PF02416 mttA/Hcf106 family LPH58_09080 PF02416 mttA/Hcf106 family LPH58_09085 PF00902 Sec-independent protein translocase protein (TatC) LPH58_09095 PF00117 Glutamine amidotransferase class-I LPH58_09095 PF00958 GMP synthase C terminal domain LPH58_09095 PF02540 NAD synthase LPH58_09100 PF00127 Copper binding proteins, plastocyanin/azurin family LPH58_09105 PF03193 RsgA GTPase LPH58_09110 PF02021 Uncharacterised protein family UPF0102 LPH58_09115 PF04348 LppC putative lipoprotein LPH58_09120 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LPH58_09125 PF00593 TonB dependent receptor LPH58_09125 PF07715 TonB-dependent Receptor Plug Domain LPH58_09130 PF01588 Putative tRNA binding domain LPH58_09130 PF09334 tRNA synthetases class I (M) LPH58_09140 PF04060 Putative Fe-S cluster LPH58_09185 PF07687 Peptidase dimerisation domain LPH58_09185 PF01546 Peptidase family M20/M25/M40 LPH58_09210 PF05567 Neisseria PilC beta-propeller domain LPH58_09235 PF11892 Domain of unknown function (DUF3412) LPH58_09235 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases LPH58_09235 PF03641 Possible lysine decarboxylase LPH58_09240 PF12792 CSS motif domain associated with EAL LPH58_09240 PF00563 EAL domain LPH58_09250 PF00899 ThiF family LPH58_09255 PF01926 50S ribosome-binding GTPase LPH58_09255 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LPH58_09260 PF13360 PQQ-like domain LPH58_09260 PF01011 PQQ enzyme repeat LPH58_09280 PF04055 Radical SAM superfamily LPH58_09285 PF00334 Nucleoside diphosphate kinase LPH58_09290 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LPH58_09290 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LPH58_09295 PF00709 Adenylosuccinate synthetase LPH58_09305 PF01145 SPFH domain / Band 7 family LPH58_09310 PF01145 SPFH domain / Band 7 family LPH58_09310 PF12221 Bacterial membrane protein N terminal LPH58_09315 PF08240 Alcohol dehydrogenase GroES-like domain LPH58_09315 PF00107 Zinc-binding dehydrogenase LPH58_09320 PF00072 Response regulator receiver domain LPH58_09335 PF03129 Anticodon binding domain LPH58_09335 PF04073 Aminoacyl-tRNA editing domain LPH58_09335 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LPH58_09345 PF01066 CDP-alcohol phosphatidyltransferase LPH58_09355 PF00583 Acetyltransferase (GNAT) family LPH58_09370 PF14310 Fibronectin type III-like domain LPH58_09370 PF00933 Glycosyl hydrolase family 3 N terminal domain LPH58_09370 PF01915 Glycosyl hydrolase family 3 C-terminal domain LPH58_09375 PF00924 Mechanosensitive ion channel LPH58_09380 PF02152 Dihydroneopterin aldolase LPH58_09385 PF00814 Glycoprotease family LPH58_09390 PF01165 Ribosomal protein S21 LPH58_09395 PF09424 Yqey-like protein LPH58_09400 PF03631 Virulence factor BrkB LPH58_09405 PF10410 DnaB-helicase binding domain of primase LPH58_09405 PF08275 DNA primase catalytic core, N-terminal domain LPH58_09405 PF01807 CHC2 zinc finger LPH58_09405 PF08278 DNA primase DnaG DnaB-binding LPH58_09415 PF00579 tRNA synthetases class I (W and Y) LPH58_09420 PF13538 UvrD-like helicase C-terminal domain LPH58_09425 PF00580 UvrD/REP helicase N-terminal domain LPH58_09425 PF13361 UvrD-like helicase C-terminal domain LPH58_09425 PF12705 PD-(D/E)XK nuclease superfamily LPH58_09430 PF17946 RecC C-terminal domain LPH58_09435 PF00005 ABC transporter LPH58_09440 PF02405 Permease MlaE LPH58_09445 PF02470 MlaD protein LPH58_09450 PF05494 MlaC protein LPH58_09460 PF04333 MlaA lipoprotein LPH58_09465 PF02646 RmuC family LPH58_09470 PF00005 ABC transporter LPH58_09485 PF13520 Amino acid permease LPH58_09495 PF10672 S-adenosylmethionine-dependent methyltransferase LPH58_09495 PF17785 PUA-like domain LPH58_09500 PF03741 Integral membrane protein TerC family LPH58_09515 PF01521 Iron-sulphur cluster biosynthesis LPH58_09530 PF00072 Response regulator receiver domain LPH58_09530 PF00486 Transcriptional regulatory protein, C terminal LPH58_09535 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LPH58_09535 PF00672 HAMP domain LPH58_09535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH58_09535 PF00512 His Kinase A (phospho-acceptor) domain LPH58_09535 PF00072 Response regulator receiver domain LPH58_09535 PF01627 Hpt domain LPH58_09540 PF01627 Hpt domain LPH58_09540 PF00672 HAMP domain LPH58_09540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH58_09540 PF00072 Response regulator receiver domain LPH58_09540 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LPH58_09540 PF00512 His Kinase A (phospho-acceptor) domain LPH58_09545 PF00210 Ferritin-like domain LPH58_09570 PF02773 S-adenosylmethionine synthetase, C-terminal domain LPH58_09570 PF02772 S-adenosylmethionine synthetase, central domain LPH58_09570 PF00438 S-adenosylmethionine synthetase, N-terminal domain LPH58_09580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH58_09585 PF00072 Response regulator receiver domain LPH58_09585 PF00486 Transcriptional regulatory protein, C terminal LPH58_09595 PF01207 Dihydrouridine synthase (Dus) LPH58_09600 PF00593 TonB dependent receptor LPH58_09600 PF07715 TonB-dependent Receptor Plug Domain LPH58_09615 PF00004 ATPase family associated with various cellular activities (AAA) LPH58_09615 PF07724 AAA domain (Cdc48 subfamily) LPH58_09615 PF17871 AAA lid domain LPH58_09615 PF02861 Clp amino terminal domain, pathogenicity island component LPH58_09615 PF10431 C-terminal, D2-small domain, of ClpB protein LPH58_09625 PF00301 Rubredoxin LPH58_09630 PF02581 Thiamine monophosphate synthase LPH58_09645 PF00067 Cytochrome P450 LPH58_09675 PF03796 DnaB-like helicase C terminal domain LPH58_09675 PF00772 DnaB-like helicase N terminal domain LPH58_09680 PF00691 OmpA family LPH58_09680 PF05736 OprF membrane domain LPH58_09690 PF00248 Aldo/keto reductase family LPH58_09695 PF17092 Penicillin-binding protein OB-like domain LPH58_09695 PF00912 Transglycosylase LPH58_09695 PF00905 Penicillin binding protein transpeptidase domain LPH58_09700 PF11104 Type IV pilus assembly protein PilM; LPH58_09705 PF05137 Fimbrial assembly protein (PilN) LPH58_09710 PF04350 Pilus assembly protein, PilO LPH58_09715 PF04351 Pilus assembly protein, PilP LPH58_09720 PF03958 Bacterial type II/III secretion system short domain LPH58_09720 PF11741 AMIN domain LPH58_09720 PF00263 Bacterial type II and III secretion system protein LPH58_09720 PF07660 Secretin and TonB N terminus short domain LPH58_09730 PF08019 Phosphoethanolamine transferase EptA/EptB LPH58_09730 PF00884 Sulfatase LPH58_09735 PF00067 Cytochrome P450 LPH58_09740 PF00270 DEAD/DEAH box helicase LPH58_09740 PF00271 Helicase conserved C-terminal domain LPH58_09740 PF17191 RecG wedge domain LPH58_09745 PF01042 Endoribonuclease L-PSP LPH58_09750 PF13291 ACT domain LPH58_09750 PF04607 Region found in RelA / SpoT proteins LPH58_09750 PF02824 TGS domain LPH58_09760 PF01565 FAD binding domain LPH58_09760 PF02913 FAD linked oxidases, C-terminal domain LPH58_09765 PF05736 OprF membrane domain LPH58_09765 PF00691 OmpA family LPH58_09770 PF02600 Disulfide bond formation protein DsbB LPH58_09775 PF07715 TonB-dependent Receptor Plug Domain LPH58_09775 PF00593 TonB dependent receptor LPH58_09780 PF02590 Predicted SPOUT methyltransferase LPH58_09795 PF00271 Helicase conserved C-terminal domain LPH58_09795 PF04851 Type III restriction enzyme, res subunit LPH58_09795 PF02151 UvrB/uvrC motif LPH58_09795 PF12344 Ultra-violet resistance protein B LPH58_09795 PF17757 UvrB interaction domain LPH58_09810 PF00701 Dihydrodipicolinate synthetase family LPH58_09820 PF00578 AhpC/TSA family LPH58_09825 PF02562 PhoH-like protein LPH58_09825 PF13638 PIN domain LPH58_09845 PF00586 AIR synthase related protein, N-terminal domain LPH58_09845 PF02769 AIR synthase related protein, C-terminal domain LPH58_09850 PF01029 NusB family LPH58_09855 PF00885 6,7-dimethyl-8-ribityllumazine synthase LPH58_09860 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LPH58_09860 PF00925 GTP cyclohydrolase II LPH58_09865 PF00677 Lumazine binding domain LPH58_09870 PF01872 RibD C-terminal domain LPH58_09870 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LPH58_09880 PF03477 ATP cone domain LPH58_09890 PF00464 Serine hydroxymethyltransferase LPH58_09895 PF00005 ABC transporter LPH58_09895 PF12848 ABC transporter LPH58_09900 PF06039 Malate:quinone oxidoreductase (Mqo) LPH58_09905 PF04134 Protein of unknown function, DUF393 LPH58_09910 PF02578 Multi-copper polyphenol oxidoreductase laccase LPH58_09915 PF00849 RNA pseudouridylate synthase LPH58_09915 PF01479 S4 domain LPH58_09920 PF13525 Outer membrane lipoprotein LPH58_09930 PF02421 Ferrous iron transport protein B LPH58_09930 PF07670 Nucleoside recognition LPH58_09930 PF07664 Ferrous iron transport protein B C terminus LPH58_09945 PF04386 Stringent starvation protein B LPH58_09950 PF00043 Glutathione S-transferase, C-terminal domain LPH58_09950 PF02798 Glutathione S-transferase, N-terminal domain LPH58_09970 PF01464 Transglycosylase SLT domain LPH58_09975 PF01938 TRAM domain LPH58_09975 PF00919 Uncharacterized protein family UPF0004 LPH58_09975 PF04055 Radical SAM superfamily LPH58_09980 PF02562 PhoH-like protein LPH58_09985 PF02130 Uncharacterized protein family UPF0054 LPH58_09995 PF00571 CBS domain LPH58_09995 PF03471 Transporter associated domain LPH58_10025 PF04829 Pre-toxin domain with VENN motif LPH58_10025 PF05860 haemagglutination activity domain LPH58_10025 PF13332 Hemagglutinin repeat LPH58_10030 PF13332 Hemagglutinin repeat LPH58_10030 PF13018 Extended Signal Peptide of Type V secretion system LPH58_10030 PF04829 Pre-toxin domain with VENN motif LPH58_10030 PF05860 haemagglutination activity domain LPH58_10035 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB LPH58_10035 PF17287 POTRA domain LPH58_10035 PF08479 POTRA domain, ShlB-type LPH58_10045 PF00521 DNA gyrase/topoisomerase IV, subunit A LPH58_10045 PF03989 DNA gyrase C-terminal domain, beta-propeller LPH58_10050 PF01008 Initiation factor 2 subunit family LPH58_10060 PF00152 tRNA synthetases class II (D, K and N) LPH58_10065 PF00583 Acetyltransferase (GNAT) family LPH58_10070 PF00533 BRCA1 C Terminus (BRCT) domain LPH58_10070 PF12826 Helix-hairpin-helix motif LPH58_10070 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LPH58_10070 PF03120 NAD-dependent DNA ligase OB-fold domain LPH58_10070 PF01653 NAD-dependent DNA ligase adenylation domain LPH58_10080 PF04354 ZipA, C-terminal FtsZ-binding domain LPH58_10085 PF02463 RecF/RecN/SMC N terminal domain LPH58_10090 PF01281 Ribosomal protein L9, N-terminal domain LPH58_10090 PF03948 Ribosomal protein L9, C-terminal domain LPH58_10095 PF01084 Ribosomal protein S18 LPH58_10100 PF01250 Ribosomal protein S6 LPH58_10105 PF01521 Iron-sulphur cluster biosynthesis LPH58_10110 PF01336 OB-fold nucleic acid binding domain LPH58_10110 PF00152 tRNA synthetases class II (D, K and N) LPH58_10115 PF01061 ABC-2 type transporter LPH58_10120 PF00005 ABC transporter LPH58_10130 PF01180 Dihydroorotate dehydrogenase LPH58_10135 PF01565 FAD binding domain LPH58_10135 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LPH58_10140 PF00892 EamA-like transporter family LPH58_10145 PF01569 PAP2 superfamily LPH58_10150 PF04551 GcpE protein LPH58_10160 PF00072 Response regulator receiver domain LPH58_10165 PF00889 Elongation factor TS LPH58_10170 PF00318 Ribosomal protein S2 LPH58_10185 PF00005 ABC transporter LPH58_10185 PF00664 ABC transporter transmembrane region LPH58_10205 PF02321 Outer membrane efflux protein LPH58_10210 PF12850 Calcineurin-like phosphoesterase superfamily domain LPH58_10215 PF02541 Ppx/GppA phosphatase family LPH58_10220 PF13089 Polyphosphate kinase N-terminal domain LPH58_10220 PF13090 Polyphosphate kinase C-terminal domain 2 LPH58_10220 PF17941 Polyphosphate kinase C-terminal domain 1 LPH58_10220 PF02503 Polyphosphate kinase middle domain LPH58_10225 PF11808 Phosphate regulon sensor protein PhoR LPH58_10225 PF00989 PAS fold LPH58_10225 PF00512 His Kinase A (phospho-acceptor) domain LPH58_10225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH58_10230 PF00486 Transcriptional regulatory protein, C terminal LPH58_10230 PF00072 Response regulator receiver domain LPH58_10235 PF13181 Tetratricopeptide repeat LPH58_10235 PF01435 Peptidase family M48 LPH58_10240 PF00462 Glutaredoxin LPH58_10245 PF00180 Isocitrate/isopropylmalate dehydrogenase LPH58_10255 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LPH58_10255 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LPH58_10265 PF00037 4Fe-4S binding domain LPH58_10265 PF11953 Domain of unknown function (DUF3470) LPH58_10275 PF01106 NifU-like domain LPH58_10280 PF01329 Pterin 4 alpha carbinolamine dehydratase LPH58_10295 PF00849 RNA pseudouridylate synthase LPH58_10295 PF01479 S4 domain LPH58_10300 PF00575 S1 RNA binding domain LPH58_10300 PF10150 Ribonuclease E/G family LPH58_10300 PF12111 Polyribonucleotide phosphorylase C terminal LPH58_10305 PF00072 Response regulator receiver domain LPH58_10305 PF00196 Bacterial regulatory proteins, luxR family LPH58_10310 PF17773 UPF0176 acylphosphatase like domain LPH58_10320 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LPH58_10320 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LPH58_10325 PF00545 ribonuclease LPH58_10335 PF00005 ABC transporter LPH58_10335 PF16326 ABC transporter C-terminal domain LPH58_10335 PF12848 ABC transporter LPH58_10340 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LPH58_10345 PF00313 'Cold-shock' DNA-binding domain LPH58_10355 PF01435 Peptidase family M48 LPH58_10360 PF03143 Elongation factor Tu C-terminal domain LPH58_10360 PF03144 Elongation factor Tu domain 2 LPH58_10360 PF00009 Elongation factor Tu GTP binding domain LPH58_10365 PF00009 Elongation factor Tu GTP binding domain LPH58_10365 PF14492 Elongation Factor G, domain II LPH58_10365 PF03764 Elongation factor G, domain IV LPH58_10365 PF03144 Elongation factor Tu domain 2 LPH58_10365 PF00679 Elongation factor G C-terminus LPH58_10370 PF00177 Ribosomal protein S7p/S5e LPH58_10375 PF00164 Ribosomal protein S12/S23 LPH58_10380 PF04983 RNA polymerase Rpb1, domain 3 LPH58_10380 PF04998 RNA polymerase Rpb1, domain 5 LPH58_10380 PF04997 RNA polymerase Rpb1, domain 1 LPH58_10380 PF00623 RNA polymerase Rpb1, domain 2 LPH58_10380 PF05000 RNA polymerase Rpb1, domain 4 LPH58_10385 PF04563 RNA polymerase beta subunit LPH58_10385 PF04561 RNA polymerase Rpb2, domain 2 LPH58_10385 PF04565 RNA polymerase Rpb2, domain 3 LPH58_10385 PF10385 RNA polymerase beta subunit external 1 domain LPH58_10385 PF00562 RNA polymerase Rpb2, domain 6 LPH58_10385 PF04560 RNA polymerase Rpb2, domain 7 LPH58_10390 PF00542 Ribosomal protein L7/L12 C-terminal domain LPH58_10390 PF16320 Ribosomal protein L7/L12 dimerisation domain LPH58_10395 PF00466 Ribosomal protein L10 LPH58_10400 PF00687 Ribosomal protein L1p/L10e family LPH58_10405 PF03946 Ribosomal protein L11, N-terminal domain LPH58_10405 PF00298 Ribosomal protein L11, RNA binding domain LPH58_10410 PF00467 KOW motif LPH58_10410 PF02357 Transcription termination factor nusG LPH58_10415 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LPH58_10425 PF00009 Elongation factor Tu GTP binding domain LPH58_10425 PF03144 Elongation factor Tu domain 2 LPH58_10425 PF03143 Elongation factor Tu C-terminal domain LPH58_10445 PF06071 Protein of unknown function (DUF933) LPH58_10445 PF01926 50S ribosome-binding GTPase LPH58_10450 PF01195 Peptidyl-tRNA hydrolase LPH58_10455 PF01386 Ribosomal L25p family LPH58_10455 PF14693 Ribosomal protein TL5, C-terminal domain LPH58_10460 PF14572 Phosphoribosyl synthetase-associated domain LPH58_10460 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LPH58_10470 PF08544 GHMP kinases C terminal LPH58_10470 PF00288 GHMP kinases N terminal domain LPH58_10475 PF03550 Outer membrane lipoprotein LolB LPH58_10485 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LPH58_10485 PF01488 Shikimate / quinate 5-dehydrogenase LPH58_10485 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LPH58_10490 PF00472 RF-1 domain LPH58_10490 PF03462 PCRF domain LPH58_10500 PF02926 THUMP domain LPH58_10500 PF01170 Putative RNA methylase family UPF0020 LPH58_10500 PF10672 S-adenosylmethionine-dependent methyltransferase LPH58_10560 PF00497 Bacterial extracellular solute-binding proteins, family 3 LPH58_10565 PF00528 Binding-protein-dependent transport system inner membrane component LPH58_10570 PF00005 ABC transporter LPH58_10575 PF00528 Binding-protein-dependent transport system inner membrane component LPH58_10580 PF13361 UvrD-like helicase C-terminal domain LPH58_10580 PF00580 UvrD/REP helicase N-terminal domain LPH58_10580 PF12705 PD-(D/E)XK nuclease superfamily LPH58_10590 PF01914 MarC family integral membrane protein LPH58_10595 PF00462 Glutaredoxin LPH58_10600 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LPH58_10600 PF02222 ATP-grasp domain LPH58_10605 PF00731 AIR carboxylase LPH58_10625 PF07732 Multicopper oxidase LPH58_10625 PF07731 Multicopper oxidase LPH58_10635 PF13361 UvrD-like helicase C-terminal domain LPH58_10635 PF00580 UvrD/REP helicase N-terminal domain LPH58_10645 PF04349 Periplasmic glucan biosynthesis protein, MdoG LPH58_10650 PF01343 Peptidase family S49 LPH58_10655 PF01554 MatE LPH58_10670 PF00270 DEAD/DEAH box helicase LPH58_10670 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LPH58_10670 PF00271 Helicase conserved C-terminal domain LPH58_10670 PF17764 3′ DNA-binding domain (3′BD) LPH58_10670 PF18074 Primosomal protein N C-terminal domain LPH58_10675 PF00140 Sigma-70 factor, region 1.2 LPH58_10675 PF04545 Sigma-70, region 4 LPH58_10675 PF04542 Sigma-70 region 2 LPH58_10680 PF03167 Uracil DNA glycosylase superfamily LPH58_10685 PF00072 Response regulator receiver domain LPH58_10685 PF01339 CheB methylesterase LPH58_10690 PF18075 FtsX extracellular domain LPH58_10695 PF00005 ABC transporter LPH58_10700 PF00271 Helicase conserved C-terminal domain LPH58_10700 PF12300 ATP-dependent RNA helicase RhlB LPH58_10700 PF00270 DEAD/DEAH box helicase LPH58_10705 PF00085 Thioredoxin LPH58_10710 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LPH58_10710 PF07498 Rho termination factor, N-terminal domain LPH58_10710 PF07497 Rho termination factor, RNA-binding domain LPH58_10715 PF03971 Monomeric isocitrate dehydrogenase LPH58_10720 PF09704 CRISPR-associated protein (Cas_Cas5) LPH58_10735 PF13180 PDZ domain LPH58_10735 PF03572 Peptidase family S41 LPH58_10740 PF01551 Peptidase family M23 LPH58_10750 PF00150 Cellulase (glycosyl hydrolase family 5) LPH58_10770 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LPH58_10770 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPH58_10775 PF04898 Glutamate synthase central domain LPH58_10775 PF01645 Conserved region in glutamate synthase LPH58_10775 PF01493 GXGXG motif LPH58_10775 PF00310 Glutamine amidotransferases class-II LPH58_10785 PF03807 NADP oxidoreductase coenzyme F420-dependent LPH58_10785 PF14748 Pyrroline-5-carboxylate reductase dimerisation LPH58_10870 PF13332 Hemagglutinin repeat LPH58_10870 PF04829 Pre-toxin domain with VENN motif LPH58_10870 PF05860 haemagglutination activity domain LPH58_10875 PF04829 Pre-toxin domain with VENN motif LPH58_10875 PF05860 haemagglutination activity domain LPH58_10875 PF13332 Hemagglutinin repeat LPH58_10875 PF13018 Extended Signal Peptide of Type V secretion system LPH58_10915 PF12008 Type I restriction and modification enzyme - subunit R C terminal LPH58_10915 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LPH58_10915 PF18766 SWI2/SNF2 ATPase LPH58_10920 PF01420 Type I restriction modification DNA specificity domain LPH58_10930 PF02384 N-6 DNA Methylase LPH58_10930 PF12161 HsdM N-terminal domain LPH58_11015 PF11867 Domain of unknown function (DUF3387) LPH58_11015 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LPH58_11015 PF18766 SWI2/SNF2 ATPase LPH58_11020 PF01420 Type I restriction modification DNA specificity domain LPH58_11025 PF02384 N-6 DNA Methylase LPH58_11030 PF02384 N-6 DNA Methylase LPH58_11140 PF01638 HxlR-like helix-turn-helix LPH58_11145 PF00106 short chain dehydrogenase LPH58_11165 PF00905 Penicillin binding protein transpeptidase domain LPH58_11165 PF00912 Transglycosylase LPH58_11165 PF14814 Bifunctional transglycosylase second domain LPH58_11175 PF04851 Type III restriction enzyme, res subunit LPH58_11175 PF13307 Helicase C-terminal domain LPH58_11185 PF00484 Carbonic anhydrase LPH58_11190 PF00534 Glycosyl transferases group 1 LPH58_11195 PF01522 Polysaccharide deacetylase LPH58_11205 PF09383 NIL domain LPH58_11205 PF00005 ABC transporter LPH58_11210 PF00528 Binding-protein-dependent transport system inner membrane component LPH58_11215 PF03180 NLPA lipoprotein LPH58_11230 PF00364 Biotin-requiring enzyme LPH58_11230 PF02817 e3 binding domain LPH58_11230 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LPH58_11235 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPH58_11235 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LPH58_11245 PF01545 Cation efflux family LPH58_11250 PF01053 Cys/Met metabolism PLP-dependent enzyme LPH58_11255 PF00561 alpha/beta hydrolase fold LPH58_11260 PF01551 Peptidase family M23 LPH58_11265 PF01975 Survival protein SurE LPH58_11280 PF01551 Peptidase family M23 LPH58_11280 PF01476 LysM domain LPH58_11295 PF01168 Alanine racemase, N-terminal domain LPH58_11295 PF00842 Alanine racemase, C-terminal domain LPH58_11300 PF01266 FAD dependent oxidoreductase LPH58_11310 PF01641 SelR domain LPH58_11320 PF02838 Glycosyl hydrolase family 20, domain 2 LPH58_11320 PF00728 Glycosyl hydrolase family 20, catalytic domain LPH58_11320 PF07691 PA14 domain LPH58_11330 PF01915 Glycosyl hydrolase family 3 C-terminal domain LPH58_11330 PF00933 Glycosyl hydrolase family 3 N terminal domain LPH58_11330 PF14310 Fibronectin type III-like domain LPH58_11330 PF07691 PA14 domain LPH58_11345 PF07971 Glycosyl hydrolase family 92 LPH58_11345 PF17678 Glycosyl hydrolase family 92 N-terminal domain LPH58_11350 PF01301 Glycosyl hydrolases family 35 LPH58_11355 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LPH58_11360 PF09312 SurA N-terminal domain LPH58_11360 PF00639 PPIC-type PPIASE domain LPH58_11365 PF04453 LPS transport system D LPH58_11375 PF01494 FAD binding domain LPH58_11380 PF01494 FAD binding domain LPH58_11385 PF12833 Helix-turn-helix domain LPH58_11385 PF06719 AraC-type transcriptional regulator N-terminus LPH58_11390 PF02525 Flavodoxin-like fold LPH58_11400 PF03466 LysR substrate binding domain LPH58_11400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH58_11405 PF10414 Sirohaem synthase dimerisation region LPH58_11405 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LPH58_11405 PF14824 Sirohaem biosynthesis protein central LPH58_11410 PF00291 Pyridoxal-phosphate dependent enzyme LPH58_11420 PF00274 Fructose-bisphosphate aldolase class-I LPH58_11430 PF00224 Pyruvate kinase, barrel domain LPH58_11430 PF02887 Pyruvate kinase, alpha/beta domain LPH58_11435 PF00162 Phosphoglycerate kinase LPH58_11450 PF00749 tRNA synthetases class I (E and Q), catalytic domain LPH58_11455 PF01475 Ferric uptake regulator family LPH58_11470 PF00553 Cellulose binding domain LPH58_11470 PF00150 Cellulase (glycosyl hydrolase family 5) LPH58_11480 PF05193 Peptidase M16 inactive domain LPH58_11480 PF00675 Insulinase (Peptidase family M16) LPH58_11495 PF03330 Lytic transglycolase LPH58_11500 PF07516 SecA Wing and Scaffold domain LPH58_11500 PF01043 SecA preprotein cross-linking domain LPH58_11500 PF02810 SEC-C motif LPH58_11500 PF07517 SecA DEAD-like domain LPH58_11505 PF01551 Peptidase family M23 LPH58_11505 PF08525 Opacity-associated protein A N-terminal motif LPH58_11505 PF01476 LysM domain LPH58_11515 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LPH58_11520 PF12327 FtsZ family, C-terminal domain LPH58_11520 PF00091 Tubulin/FtsZ family, GTPase domain LPH58_11525 PF02491 SHS2 domain inserted in FTSA LPH58_11530 PF08478 POTRA domain, FtsQ-type LPH58_11530 PF03799 Cell division protein FtsQ LPH58_11535 PF07478 D-ala D-ala ligase C-terminus LPH58_11540 PF02875 Mur ligase family, glutamate ligase domain LPH58_11540 PF08245 Mur ligase middle domain LPH58_11540 PF01225 Mur ligase family, catalytic domain LPH58_11545 PF04101 Glycosyltransferase family 28 C-terminal domain LPH58_11545 PF03033 Glycosyltransferase family 28 N-terminal domain LPH58_11550 PF01098 Cell cycle protein LPH58_11555 PF00953 Glycosyl transferase family 4 LPH58_11560 PF02875 Mur ligase family, glutamate ligase domain LPH58_11560 PF08245 Mur ligase middle domain LPH58_11560 PF01225 Mur ligase family, catalytic domain LPH58_11565 PF08245 Mur ligase middle domain LPH58_11565 PF02875 Mur ligase family, glutamate ligase domain LPH58_11565 PF01225 Mur ligase family, catalytic domain LPH58_11570 PF00905 Penicillin binding protein transpeptidase domain LPH58_11570 PF03717 Penicillin-binding Protein dimerisation domain LPH58_11575 PF04999 Cell division protein FtsL LPH58_11580 PF01795 MraW methylase family LPH58_11585 PF02381 MraZ protein, putative antitoxin-like LPH58_11590 PF03600 Citrate transporter LPH58_11590 PF02080 TrkA-C domain LPH58_11595 PF02390 Putative methyltransferase LPH58_11600 PF05690 Thiazole biosynthesis protein ThiG LPH58_11610 PF03797 Autotransporter beta-domain LPH58_11610 PF00657 GDSL-like Lipase/Acylhydrolase LPH58_11640 PF07977 FabA-like domain LPH58_11665 PF00692 dUTPase LPH58_11675 PF08676 MutL C terminal dimerisation domain LPH58_11675 PF01119 DNA mismatch repair protein, C-terminal domain LPH58_11680 PF01520 N-acetylmuramoyl-L-alanine amidase LPH58_11680 PF11741 AMIN domain LPH58_11685 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LPH58_11690 PF03853 YjeF-related protein N-terminus LPH58_11690 PF01256 Carbohydrate kinase LPH58_11695 PF13742 OB-fold nucleic acid binding domain LPH58_11695 PF02601 Exonuclease VII, large subunit LPH58_11710 PF01612 3'-5' exonuclease LPH58_11710 PF00570 HRDC domain LPH58_11740 PF00216 Bacterial DNA-binding protein LPH58_11745 PF03483 B3/4 domain LPH58_11745 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LPH58_11745 PF01588 Putative tRNA binding domain LPH58_11745 PF03484 tRNA synthetase B5 domain LPH58_11745 PF03147 Ferredoxin-fold anticodon binding domain LPH58_11750 PF01409 tRNA synthetases class II core domain (F) LPH58_11750 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LPH58_11755 PF00453 Ribosomal protein L20 LPH58_11760 PF01632 Ribosomal protein L35 LPH58_11765 PF00707 Translation initiation factor IF-3, C-terminal domain LPH58_11765 PF05198 Translation initiation factor IF-3, N-terminal domain LPH58_11770 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LPH58_11770 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LPH58_11770 PF02824 TGS domain LPH58_11770 PF03129 Anticodon binding domain LPH58_11780 PF18030 RimK PreATP-grasp domain LPH58_11780 PF08443 RimK-like ATP-grasp domain LPH58_11785 PF00486 Transcriptional regulatory protein, C terminal LPH58_11785 PF00072 Response regulator receiver domain LPH58_11790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH58_11790 PF00512 His Kinase A (phospho-acceptor) domain LPH58_11790 PF11808 Phosphate regulon sensor protein PhoR LPH58_11790 PF00989 PAS fold LPH58_11795 PF01121 Dephospho-CoA kinase LPH58_11800 PF06750 Bacterial Peptidase A24 N-terminal domain LPH58_11800 PF01478 Type IV leader peptidase family LPH58_11805 PF00482 Type II secretion system (T2SS), protein F LPH58_11810 PF07963 Prokaryotic N-terminal methylation motif LPH58_11810 PF00114 Pilin (bacterial filament) LPH58_11820 PF07963 Prokaryotic N-terminal methylation motif LPH58_11820 PF00114 Pilin (bacterial filament) LPH58_11825 PF07963 Prokaryotic N-terminal methylation motif LPH58_11825 PF00114 Pilin (bacterial filament) LPH58_11835 PF00437 Type II/IV secretion system protein LPH58_11835 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LPH58_11840 PF02954 Bacterial regulatory protein, Fis family LPH58_11840 PF00072 Response regulator receiver domain LPH58_11840 PF00158 Sigma-54 interaction domain LPH58_11845 PF00512 His Kinase A (phospho-acceptor) domain LPH58_11845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH58_11850 PF08442 ATP-grasp domain LPH58_11850 PF00549 CoA-ligase LPH58_11855 PF02629 CoA binding domain LPH58_11855 PF00549 CoA-ligase LPH58_11860 PF01926 50S ribosome-binding GTPase LPH58_11860 PF12631 MnmE helical domain LPH58_11860 PF10396 GTP-binding protein TrmE N-terminus LPH58_11870 PF02096 60Kd inner membrane protein LPH58_11870 PF14849 YidC periplasmic domain LPH58_11875 PF00825 Ribonuclease P LPH58_11880 PF00468 Ribosomal protein L34