locus-tag class description LPH62_00065 PF01850 PIN domain LPH62_00075 PF00300 Histidine phosphatase superfamily (branch 1) LPH62_00080 PF10459 Peptidase S46 LPH62_00085 PF13667 ThiC-associated domain LPH62_00085 PF01964 Radical SAM ThiC family LPH62_00090 PF00970 Oxidoreductase FAD-binding domain LPH62_00090 PF00175 Oxidoreductase NAD-binding domain LPH62_00095 PF00255 Glutathione peroxidase LPH62_00100 PF00854 POT family LPH62_00105 PF04493 Endonuclease V LPH62_00110 PF00300 Histidine phosphatase superfamily (branch 1) LPH62_00115 PF04055 Radical SAM superfamily LPH62_00125 PF00691 OmpA family LPH62_00130 PF07676 WD40-like Beta Propeller Repeat LPH62_00130 PF04052 TolB amino-terminal domain LPH62_00140 PF02472 Biopolymer transport protein ExbD/TolR LPH62_00145 PF01618 MotA/TolQ/ExbB proton channel family LPH62_00150 PF03061 Thioesterase superfamily LPH62_00155 PF17864 RuvB AAA lid domain LPH62_00155 PF05491 RuvB C-terminal winged helix domain LPH62_00155 PF05496 Holliday junction DNA helicase RuvB P-loop domain LPH62_00160 PF02705 K+ potassium transporter LPH62_00165 PF07499 RuvA, C-terminal domain LPH62_00165 PF01330 RuvA N terminal domain LPH62_00170 PF02075 Crossover junction endodeoxyribonuclease RuvC LPH62_00175 PF01709 Transcriptional regulator LPH62_00185 PF04362 Bacterial Fe(2+) trafficking LPH62_00190 PF00633 Helix-hairpin-helix motif LPH62_00190 PF00730 HhH-GPD superfamily base excision DNA repair protein LPH62_00190 PF14815 NUDIX domain LPH62_00195 PF00448 SRP54-type protein, GTPase domain LPH62_00195 PF02881 SRP54-type protein, helical bundle domain LPH62_00220 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ LPH62_00225 PF04221 RelB antitoxin LPH62_00300 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system LPH62_00355 PF06508 Queuosine biosynthesis protein QueC LPH62_00360 PF02938 GAD domain LPH62_00360 PF00152 tRNA synthetases class II (D, K and N) LPH62_00360 PF01336 OB-fold nucleic acid binding domain LPH62_00380 PF05683 Fumarase C-terminus LPH62_00380 PF05681 Fumarate hydratase (Fumerase) LPH62_00405 PF01648 4'-phosphopantetheinyl transferase superfamily LPH62_00410 PF02527 rRNA small subunit methyltransferase G LPH62_00415 PF02779 Transketolase, pyrimidine binding domain LPH62_00415 PF02780 Transketolase, C-terminal domain LPH62_00415 PF00456 Transketolase, thiamine diphosphate binding domain LPH62_00420 PF00375 Sodium:dicarboxylate symporter family LPH62_00430 PF01625 Peptide methionine sulfoxide reductase LPH62_00445 PF01432 Peptidase family M3 LPH62_00450 PF06903 VirK protein LPH62_00455 PF02875 Mur ligase family, glutamate ligase domain LPH62_00455 PF08245 Mur ligase middle domain LPH62_00470 PF00156 Phosphoribosyl transferase domain LPH62_00480 PF00072 Response regulator receiver domain LPH62_00480 PF01339 CheB methylesterase LPH62_00485 PF01584 CheW-like domain LPH62_00485 PF02895 Signal transducing histidine kinase, homodimeric domain LPH62_00485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH62_00485 PF01627 Hpt domain LPH62_00485 PF00072 Response regulator receiver domain LPH62_00490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LPH62_00490 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LPH62_00495 PF01584 CheW-like domain LPH62_00500 PF00072 Response regulator receiver domain LPH62_00505 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain LPH62_00505 PF02951 Prokaryotic glutathione synthetase, N-terminal domain LPH62_00520 PF02092 Glycyl-tRNA synthetase beta subunit LPH62_00520 PF05746 DALR anticodon binding domain LPH62_00525 PF02091 Glycyl-tRNA synthetase alpha subunit LPH62_00530 PF00795 Carbon-nitrogen hydrolase LPH62_00530 PF02540 NAD synthase LPH62_00550 PF03692 Putative zinc- or iron-chelating domain LPH62_00560 PF00561 alpha/beta hydrolase fold LPH62_00570 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LPH62_00570 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LPH62_00580 PF00588 SpoU rRNA Methylase family LPH62_00590 PF01808 AICARFT/IMPCHase bienzyme LPH62_00590 PF02142 MGS-like domain LPH62_00595 PF02843 Phosphoribosylglycinamide synthetase, C domain LPH62_00595 PF02844 Phosphoribosylglycinamide synthetase, N domain LPH62_00595 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LPH62_00615 PF12805 FUSC-like inner membrane protein yccS LPH62_00625 PF03186 CobD/Cbib protein LPH62_00630 PF03895 YadA-like membrane anchor domain LPH62_00630 PF05658 Head domain of trimeric autotransporter adhesin LPH62_00630 PF05662 Coiled stalk of trimeric autotransporter adhesin LPH62_00635 PF01227 GTP cyclohydrolase I LPH62_00645 PF00132 Bacterial transferase hexapeptide (six repeats) LPH62_00650 PF00588 SpoU rRNA Methylase family LPH62_00650 PF08032 RNA 2'-O ribose methyltransferase substrate binding LPH62_00655 PF00773 RNB domain LPH62_00655 PF00575 S1 RNA binding domain LPH62_00655 PF17876 Cold shock domain LPH62_00655 PF08461 Ribonuclease R winged-helix domain LPH62_00655 PF08206 Ribonuclease B OB domain LPH62_00665 PF00959 Phage lysozyme LPH62_00735 PF02129 X-Pro dipeptidyl-peptidase (S15 family) LPH62_00740 PF07690 Major Facilitator Superfamily LPH62_00745 PF03466 LysR substrate binding domain LPH62_00745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH62_00760 PF01161 Phosphatidylethanolamine-binding protein LPH62_00765 PF00719 Inorganic pyrophosphatase LPH62_00770 PF00085 Thioredoxin LPH62_00780 PF13603 Leucyl-tRNA synthetase, Domain 2 LPH62_00780 PF00133 tRNA synthetases class I (I, L, M and V) LPH62_00780 PF08264 Anticodon-binding domain of tRNA LPH62_00795 PF01467 Cytidylyltransferase-like LPH62_00810 PF13406 Transglycosylase SLT domain LPH62_00815 PF03330 Lytic transglycolase LPH62_00815 PF05036 Sporulation related domain LPH62_00920 PF13332 Hemagglutinin repeat LPH62_00920 PF05860 haemagglutination activity domain LPH62_00920 PF15605 Bacterial toxin 28 LPH62_00920 PF04829 Pre-toxin domain with VENN motif LPH62_00950 PF04829 Pre-toxin domain with VENN motif LPH62_00950 PF05860 haemagglutination activity domain LPH62_00950 PF13332 Hemagglutinin repeat LPH62_00955 PF05860 haemagglutination activity domain LPH62_00955 PF04829 Pre-toxin domain with VENN motif LPH62_00955 PF13018 Extended Signal Peptide of Type V secretion system LPH62_00955 PF13332 Hemagglutinin repeat LPH62_01050 PF13332 Hemagglutinin repeat LPH62_01050 PF05860 haemagglutination activity domain LPH62_01050 PF15605 Bacterial toxin 28 LPH62_01050 PF04829 Pre-toxin domain with VENN motif LPH62_01050 PF05860 haemagglutination activity domain LPH62_01050 PF13332 Hemagglutinin repeat LPH62_01050 PF15605 Bacterial toxin 28 LPH62_01050 PF04829 Pre-toxin domain with VENN motif LPH62_01055 PF13332 Hemagglutinin repeat LPH62_01055 PF13018 Extended Signal Peptide of Type V secretion system LPH62_01055 PF05860 haemagglutination activity domain LPH62_01055 PF04829 Pre-toxin domain with VENN motif LPH62_01075 PF01810 LysE type translocator LPH62_01095 PF01132 Elongation factor P (EF-P) OB domain LPH62_01095 PF09285 Elongation factor P, C-terminal LPH62_01095 PF08207 Elongation factor P (EF-P) KOW-like domain LPH62_01100 PF01565 FAD binding domain LPH62_01100 PF02913 FAD linked oxidases, C-terminal domain LPH62_01105 PF01842 ACT domain LPH62_01105 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LPH62_01105 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LPH62_01110 PF13520 Amino acid permease LPH62_01115 PF13520 Amino acid permease LPH62_01120 PF00596 Class II Aldolase and Adducin N-terminal domain LPH62_01125 PF03079 ARD/ARD' family LPH62_01155 PF01502 Phosphoribosyl-AMP cyclohydrolase LPH62_01155 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LPH62_01160 PF00977 Histidine biosynthesis protein LPH62_01165 PF00977 Histidine biosynthesis protein LPH62_01170 PF00117 Glutamine amidotransferase class-I LPH62_01175 PF00475 Imidazoleglycerol-phosphate dehydratase LPH62_01180 PF00155 Aminotransferase class I and II LPH62_01185 PF00815 Histidinol dehydrogenase LPH62_01190 PF08029 HisG, C-terminal domain LPH62_01190 PF01634 ATP phosphoribosyltransferase LPH62_01205 PF13393 Histidyl-tRNA synthetase LPH62_01205 PF03129 Anticodon binding domain LPH62_01210 PF14821 Threonine synthase N terminus LPH62_01210 PF00291 Pyridoxal-phosphate dependent enzyme LPH62_01215 PF00288 GHMP kinases N terminal domain LPH62_01215 PF08544 GHMP kinases C terminal LPH62_01220 PF03447 Homoserine dehydrogenase, NAD binding domain LPH62_01220 PF13840 ACT domain LPH62_01220 PF00742 Homoserine dehydrogenase LPH62_01220 PF01842 ACT domain LPH62_01220 PF00696 Amino acid kinase family LPH62_01230 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LPH62_01230 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LPH62_01235 PF03652 Holliday junction resolvase LPH62_01240 PF02622 Uncharacterized ACR, COG1678 LPH62_01245 PF00768 D-alanyl-D-alanine carboxypeptidase LPH62_01245 PF07943 Penicillin-binding protein 5, C-terminal domain LPH62_01250 PF00141 Peroxidase LPH62_01255 PF01556 DnaJ C terminal domain LPH62_01255 PF00226 DnaJ domain LPH62_01265 PF00905 Penicillin binding protein transpeptidase domain LPH62_01265 PF00912 Transglycosylase LPH62_01265 PF06832 Penicillin-Binding Protein C-terminus Family LPH62_01270 PF00593 TonB dependent receptor LPH62_01270 PF07715 TonB-dependent Receptor Plug Domain LPH62_01290 PF04542 Sigma-70 region 2 LPH62_01290 PF08281 Sigma-70, region 4 LPH62_01300 PF13180 PDZ domain LPH62_01305 PF00009 Elongation factor Tu GTP binding domain LPH62_01305 PF03144 Elongation factor Tu domain 2 LPH62_01305 PF06421 GTP-binding protein LepA C-terminus LPH62_01305 PF00679 Elongation factor G C-terminus LPH62_01310 PF10502 Signal peptidase, peptidase S26 LPH62_01320 PF00035 Double-stranded RNA binding motif LPH62_01320 PF14622 Ribonuclease-III-like LPH62_01325 PF01926 50S ribosome-binding GTPase LPH62_01325 PF07650 KH domain LPH62_01330 PF11967 Recombination protein O N terminal LPH62_01330 PF02565 Recombination protein O C terminal LPH62_01335 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LPH62_01335 PF02780 Transketolase, C-terminal domain LPH62_01335 PF02779 Transketolase, pyrimidine binding domain LPH62_01345 PF00474 Sodium:solute symporter family LPH62_01355 PF16177 Acetyl-coenzyme A synthetase N-terminus LPH62_01355 PF00501 AMP-binding enzyme LPH62_01355 PF13193 AMP-binding enzyme C-terminal domain LPH62_01360 PF02659 Putative manganese efflux pump LPH62_01365 PF00106 short chain dehydrogenase LPH62_01380 PF13360 PQQ-like domain LPH62_01385 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region LPH62_01385 PF07676 WD40-like Beta Propeller Repeat LPH62_01385 PF00326 Prolyl oligopeptidase family LPH62_01390 PF03169 OPT oligopeptide transporter protein LPH62_01395 PF01266 FAD dependent oxidoreductase LPH62_01395 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LPH62_01400 PF00230 Major intrinsic protein LPH62_01405 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LPH62_01405 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LPH62_01420 PF08267 Cobalamin-independent synthase, N-terminal domain LPH62_01420 PF01717 Cobalamin-independent synthase, Catalytic domain LPH62_01425 PF02677 Epoxyqueuosine reductase QueH LPH62_01435 PF00501 AMP-binding enzyme LPH62_01445 PF00535 Glycosyl transferase family 2 LPH62_01450 PF01370 NAD dependent epimerase/dehydratase family LPH62_01455 PF02195 ParB-like nuclease domain LPH62_01455 PF17762 HTH domain found in ParB protein LPH62_01460 PF13614 AAA domain LPH62_01475 PF02403 Seryl-tRNA synthetase N-terminal domain LPH62_01475 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LPH62_01480 PF03544 Gram-negative bacterial TonB protein C-terminal LPH62_01485 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LPH62_01490 PF01817 Chorismate mutase type II LPH62_01490 PF00800 Prephenate dehydratase LPH62_01490 PF01842 ACT domain LPH62_01495 PF00266 Aminotransferase class-V LPH62_01505 PF12679 ABC-2 family transporter protein LPH62_01510 PF00005 ABC transporter LPH62_01540 PF00440 Bacterial regulatory proteins, tetR family LPH62_01545 PF01209 ubiE/COQ5 methyltransferase family LPH62_01555 PF00294 pfkB family carbohydrate kinase LPH62_01560 PF07690 Major Facilitator Superfamily LPH62_01570 PF04102 SlyX LPH62_01575 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LPH62_01575 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LPH62_01575 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LPH62_01580 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LPH62_01580 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LPH62_01585 PF00255 Glutathione peroxidase LPH62_01595 PF00005 ABC transporter LPH62_01610 PF00206 Lyase LPH62_01610 PF10415 Fumarase C C-terminus LPH62_01615 PF08328 Adenylosuccinate lyase C-terminal LPH62_01615 PF00206 Lyase LPH62_01620 PF08007 Cupin superfamily protein LPH62_01625 PF16078 2-oxoglutarate dehydrogenase N-terminus LPH62_01625 PF00676 Dehydrogenase E1 component LPH62_01625 PF16870 2-oxoglutarate dehydrogenase C-terminal LPH62_01625 PF02779 Transketolase, pyrimidine binding domain LPH62_01630 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LPH62_01630 PF00364 Biotin-requiring enzyme LPH62_01630 PF02817 e3 binding domain LPH62_01635 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LPH62_01635 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPH62_01645 PF00899 ThiF family LPH62_01660 PF00325 Bacterial regulatory proteins, crp family LPH62_01660 PF00027 Cyclic nucleotide-binding domain LPH62_01665 PF02675 S-adenosylmethionine decarboxylase LPH62_01670 PF03232 Ubiquinone biosynthesis protein COQ7 LPH62_01675 PF00572 Ribosomal protein L13 LPH62_01680 PF00380 Ribosomal protein S9/S16 LPH62_01685 PF00285 Citrate synthase, C-terminal domain LPH62_01690 PF01197 Ribosomal protein L31 LPH62_01695 PF00814 Glycoprotease family LPH62_01700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH62_01700 PF03466 LysR substrate binding domain LPH62_01705 PF13192 Thioredoxin domain LPH62_01705 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPH62_01710 PF10417 C-terminal domain of 1-Cys peroxiredoxin LPH62_01710 PF00578 AhpC/TSA family LPH62_01715 PF05658 Head domain of trimeric autotransporter adhesin LPH62_01715 PF03895 YadA-like membrane anchor domain LPH62_01715 PF05662 Coiled stalk of trimeric autotransporter adhesin LPH62_01715 PF13018 Extended Signal Peptide of Type V secretion system LPH62_01720 PF03958 Bacterial type II/III secretion system short domain LPH62_01720 PF00263 Bacterial type II and III secretion system protein LPH62_01730 PF10741 Type II secretion system (T2SS), protein M subtype b LPH62_01735 PF05137 Fimbrial assembly protein (PilN) LPH62_01740 PF03934 Type II secretion system (T2SS), protein K LPH62_01750 PF03934 Type II secretion system (T2SS), protein K LPH62_01760 PF07963 Prokaryotic N-terminal methylation motif LPH62_01765 PF12019 Type II transport protein GspH LPH62_01770 PF08334 Type II secretion system (T2SS), protein G LPH62_01775 PF00482 Type II secretion system (T2SS), protein F LPH62_01780 PF00437 Type II/IV secretion system protein LPH62_01780 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LPH62_01800 PF17827 PrmC N-terminal domain LPH62_01800 PF05175 Methyltransferase small domain LPH62_01810 PF00561 alpha/beta hydrolase fold LPH62_01825 PF04055 Radical SAM superfamily LPH62_01825 PF06969 HemN C-terminal domain LPH62_01830 PF01725 Ham1 family LPH62_01835 PF03725 3' exoribonuclease family, domain 2 LPH62_01835 PF01138 3' exoribonuclease family, domain 1 LPH62_01840 PF03755 YicC-like family, N-terminal region LPH62_01840 PF08340 Domain of unknown function (DUF1732) LPH62_01845 PF00625 Guanylate kinase LPH62_01850 PF01192 RNA polymerase Rpb6 LPH62_01855 PF00009 Elongation factor Tu GTP binding domain LPH62_01860 PF01507 Phosphoadenosine phosphosulfate reductase family LPH62_01865 PF00258 Flavodoxin LPH62_01865 PF00175 Oxidoreductase NAD-binding domain LPH62_01865 PF00667 FAD binding domain LPH62_01870 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LPH62_01870 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LPH62_01875 PF01507 Phosphoadenosine phosphosulfate reductase family LPH62_01900 PF13369 Transglutaminase-like superfamily LPH62_01935 PF11838 ERAP1-like C-terminal domain LPH62_01935 PF01433 Peptidase family M1 domain LPH62_01940 PF01209 ubiE/COQ5 methyltransferase family LPH62_01950 PF00004 ATPase family associated with various cellular activities (AAA) LPH62_01950 PF07724 AAA domain (Cdc48 subfamily) LPH62_01950 PF10431 C-terminal, D2-small domain, of ClpB protein LPH62_01955 PF00227 Proteasome subunit LPH62_01965 PF02899 Phage integrase, N-terminal SAM-like domain LPH62_01965 PF00589 Phage integrase family LPH62_01975 PF01678 Diaminopimelate epimerase LPH62_01985 PF00326 Prolyl oligopeptidase family LPH62_01985 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LPH62_01995 PF02082 Transcriptional regulator LPH62_02000 PF01458 Uncharacterized protein family (UPF0051) LPH62_02005 PF00005 ABC transporter LPH62_02010 PF01458 Uncharacterized protein family (UPF0051) LPH62_02015 PF00266 Aminotransferase class-V LPH62_02020 PF00355 Rieske [2Fe-2S] domain LPH62_02025 PF00534 Glycosyl transferases group 1 LPH62_02025 PF13439 Glycosyltransferase Family 4 LPH62_02030 PF01522 Polysaccharide deacetylase LPH62_02035 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LPH62_02035 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LPH62_02035 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LPH62_02035 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LPH62_02040 PF01039 Carboxyl transferase domain LPH62_02040 PF17848 Acetyl-coA carboxylase zinc finger domain LPH62_02060 PF01979 Amidohydrolase family LPH62_02065 PF01380 SIS domain LPH62_02075 PF07690 Major Facilitator Superfamily LPH62_02085 PF02685 Glucokinase LPH62_02110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH62_02110 PF00512 His Kinase A (phospho-acceptor) domain LPH62_02125 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LPH62_02130 PF00004 ATPase family associated with various cellular activities (AAA) LPH62_02130 PF16193 AAA C-terminal domain LPH62_02130 PF12002 MgsA AAA+ ATPase C terminal LPH62_02135 PF03548 Outer membrane lipoprotein carrier protein LolA LPH62_02150 PF17854 FtsK alpha domain LPH62_02150 PF09397 Ftsk gamma domain LPH62_02150 PF01580 FtsK/SpoIIIE family LPH62_02150 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LPH62_02155 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPH62_02165 PF03588 Leucyl/phenylalanyl-tRNA protein transferase LPH62_02170 PF01176 Translation initiation factor 1A / IF-1 LPH62_02175 PF00004 ATPase family associated with various cellular activities (AAA) LPH62_02175 PF07724 AAA domain (Cdc48 subfamily) LPH62_02175 PF17871 AAA lid domain LPH62_02175 PF02861 Clp amino terminal domain, pathogenicity island component LPH62_02175 PF10431 C-terminal, D2-small domain, of ClpB protein LPH62_02180 PF02617 ATP-dependent Clp protease adaptor protein ClpS LPH62_02185 PF00293 NUDIX domain LPH62_02195 PF04356 Protein of unknown function (DUF489) LPH62_02210 PF01323 DSBA-like thioredoxin domain LPH62_02220 PF01926 50S ribosome-binding GTPase LPH62_02225 PF04107 Glutamate-cysteine ligase family 2(GCS2) LPH62_02235 PF00202 Aminotransferase class-III LPH62_02240 PF00027 Cyclic nucleotide-binding domain LPH62_02240 PF00520 Ion transport protein LPH62_02245 PF02899 Phage integrase, N-terminal SAM-like domain LPH62_02245 PF00589 Phage integrase family LPH62_02250 PF13098 Thioredoxin-like domain LPH62_02250 PF10411 Disulfide bond isomerase protein N-terminus LPH62_02255 PF02769 AIR synthase related protein, C-terminal domain LPH62_02255 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal LPH62_02255 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LPH62_02265 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LPH62_02275 PF01380 SIS domain LPH62_02275 PF00571 CBS domain LPH62_02295 PF12399 Branched-chain amino acid ATP-binding cassette transporter LPH62_02295 PF00005 ABC transporter LPH62_02300 PF04963 Sigma-54 factor, core binding domain LPH62_02300 PF00309 Sigma-54 factor, Activator interacting domain (AID) LPH62_02300 PF04552 Sigma-54, DNA binding domain LPH62_02305 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LPH62_02310 PF02603 HPr Serine kinase N terminus LPH62_02310 PF07475 HPr Serine kinase C-terminal domain LPH62_02315 PF03668 P-loop ATPase protein family LPH62_02325 PF00381 PTS HPr component phosphorylation site LPH62_02330 PF02896 PEP-utilising enzyme, TIM barrel domain LPH62_02330 PF00391 PEP-utilising enzyme, mobile domain LPH62_02330 PF05524 PEP-utilising enzyme, N-terminal LPH62_02335 PF03448 MgtE intracellular N domain LPH62_02335 PF01769 Divalent cation transporter LPH62_02335 PF00571 CBS domain LPH62_02340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LPH62_02375 PF08281 Sigma-70, region 4 LPH62_02375 PF04542 Sigma-70 region 2 LPH62_02385 PF00082 Subtilase family LPH62_02390 PF00436 Single-strand binding protein family LPH62_02395 PF00348 Polyprenyl synthetase LPH62_02400 PF06481 COX Aromatic Rich Motif LPH62_02400 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LPH62_02405 PF00115 Cytochrome C and Quinol oxidase polypeptide I LPH62_02410 PF00510 Cytochrome c oxidase subunit III LPH62_02415 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LPH62_02420 PF02347 Glycine cleavage system P-protein LPH62_02430 PF04408 Helicase associated domain (HA2) LPH62_02430 PF00270 DEAD/DEAH box helicase LPH62_02430 PF11898 Domain of unknown function (DUF3418) LPH62_02430 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LPH62_02430 PF00271 Helicase conserved C-terminal domain LPH62_02435 PF00210 Ferritin-like domain LPH62_02440 PF00270 DEAD/DEAH box helicase LPH62_02440 PF00271 Helicase conserved C-terminal domain LPH62_02440 PF00570 HRDC domain LPH62_02440 PF16124 RecQ zinc-binding LPH62_02440 PF09382 RQC domain LPH62_02460 PF00296 Luciferase-like monooxygenase LPH62_02465 PF18073 Rubredoxin metal binding domain LPH62_02480 PF00290 Tryptophan synthase alpha chain LPH62_02485 PF00291 Pyridoxal-phosphate dependent enzyme LPH62_02490 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LPH62_02495 PF01416 tRNA pseudouridine synthase LPH62_02505 PF01118 Semialdehyde dehydrogenase, NAD binding domain LPH62_02505 PF02774 Semialdehyde dehydrogenase, dimerisation domain LPH62_02515 PF01264 Chorismate synthase LPH62_02520 PF05175 Methyltransferase small domain LPH62_02530 PF06594 Haemolysin-type calcium binding protein related domain LPH62_02530 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) LPH62_02585 PF00348 Polyprenyl synthetase LPH62_02590 PF02609 Exonuclease VII small subunit LPH62_02595 PF11734 TilS substrate C-terminal domain LPH62_02595 PF01171 PP-loop family LPH62_02595 PF09179 TilS substrate binding domain LPH62_02605 PF00375 Sodium:dicarboxylate symporter family LPH62_02610 PF00877 NlpC/P60 family LPH62_02615 PF00877 NlpC/P60 family LPH62_02620 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LPH62_02625 PF04235 Protein of unknown function (DUF418) LPH62_02650 PF10576 Iron-sulfur binding domain of endonuclease III LPH62_02650 PF00633 Helix-hairpin-helix motif LPH62_02650 PF00730 HhH-GPD superfamily base excision DNA repair protein LPH62_02665 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LPH62_02665 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LPH62_02670 PF00293 NUDIX domain LPH62_02700 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LPH62_02700 PF01488 Shikimate / quinate 5-dehydrogenase LPH62_02700 PF08501 Shikimate dehydrogenase substrate binding domain LPH62_02705 PF08543 Phosphomethylpyrimidine kinase LPH62_02705 PF02581 Thiamine monophosphate synthase LPH62_02725 PF02683 Cytochrome C biogenesis protein transmembrane region LPH62_02725 PF11412 Disulphide bond corrector protein DsbC LPH62_02730 PF03091 CutA1 divalent ion tolerance protein LPH62_02735 PF00166 Chaperonin 10 Kd subunit LPH62_02740 PF00118 TCP-1/cpn60 chaperonin family LPH62_02765 PF01370 NAD dependent epimerase/dehydratase family LPH62_02770 PF01370 NAD dependent epimerase/dehydratase family LPH62_02775 PF16363 GDP-mannose 4,6 dehydratase LPH62_02790 PF00291 Pyridoxal-phosphate dependent enzyme LPH62_02810 PF00593 TonB dependent receptor LPH62_02810 PF07715 TonB-dependent Receptor Plug Domain LPH62_02815 PF18331 PKHD-type hydroxylase C-terminal domain LPH62_02815 PF13640 2OG-Fe(II) oxygenase superfamily LPH62_02835 PF02424 ApbE family LPH62_02840 PF00175 Oxidoreductase NAD-binding domain LPH62_02840 PF00667 FAD binding domain LPH62_02840 PF00258 Flavodoxin LPH62_02850 PF01636 Phosphotransferase enzyme family LPH62_02855 PF00483 Nucleotidyl transferase LPH62_02860 PF00308 Bacterial dnaA protein LPH62_02865 PF01594 AI-2E family transporter LPH62_02875 PF02769 AIR synthase related protein, C-terminal domain LPH62_02875 PF00586 AIR synthase related protein, N-terminal domain LPH62_02880 PF00551 Formyl transferase LPH62_02895 PF02223 Thymidylate kinase LPH62_02900 PF05649 Peptidase family M13 LPH62_02900 PF01431 Peptidase family M13 LPH62_02905 PF07977 FabA-like domain LPH62_02910 PF01171 PP-loop family LPH62_02915 PF04381 Putative exonuclease, RdgC LPH62_02925 PF00762 Ferrochelatase LPH62_02935 PF02416 mttA/Hcf106 family LPH62_02940 PF02416 mttA/Hcf106 family LPH62_02945 PF00902 Sec-independent protein translocase protein (TatC) LPH62_02955 PF00117 Glutamine amidotransferase class-I LPH62_02955 PF00958 GMP synthase C terminal domain LPH62_02955 PF02540 NAD synthase LPH62_02960 PF00127 Copper binding proteins, plastocyanin/azurin family LPH62_02965 PF03193 RsgA GTPase LPH62_02970 PF02021 Uncharacterised protein family UPF0102 LPH62_02975 PF04348 LppC putative lipoprotein LPH62_02980 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LPH62_02985 PF07715 TonB-dependent Receptor Plug Domain LPH62_02985 PF00593 TonB dependent receptor LPH62_02990 PF09334 tRNA synthetases class I (M) LPH62_02990 PF01588 Putative tRNA binding domain LPH62_03000 PF04060 Putative Fe-S cluster LPH62_03045 PF07687 Peptidase dimerisation domain LPH62_03045 PF01546 Peptidase family M20/M25/M40 LPH62_03070 PF05567 Neisseria PilC beta-propeller domain LPH62_03095 PF11892 Domain of unknown function (DUF3412) LPH62_03095 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases LPH62_03095 PF03641 Possible lysine decarboxylase LPH62_03100 PF00563 EAL domain LPH62_03100 PF12792 CSS motif domain associated with EAL LPH62_03110 PF00899 ThiF family LPH62_03115 PF01926 50S ribosome-binding GTPase LPH62_03115 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LPH62_03120 PF13360 PQQ-like domain LPH62_03120 PF01011 PQQ enzyme repeat LPH62_03140 PF04055 Radical SAM superfamily LPH62_03145 PF00334 Nucleoside diphosphate kinase LPH62_03150 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LPH62_03150 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LPH62_03155 PF00709 Adenylosuccinate synthetase LPH62_03165 PF01145 SPFH domain / Band 7 family LPH62_03170 PF01145 SPFH domain / Band 7 family LPH62_03170 PF12221 Bacterial membrane protein N terminal LPH62_03175 PF08240 Alcohol dehydrogenase GroES-like domain LPH62_03175 PF00107 Zinc-binding dehydrogenase LPH62_03180 PF00072 Response regulator receiver domain LPH62_03195 PF03129 Anticodon binding domain LPH62_03195 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LPH62_03195 PF04073 Aminoacyl-tRNA editing domain LPH62_03205 PF01066 CDP-alcohol phosphatidyltransferase LPH62_03215 PF00583 Acetyltransferase (GNAT) family LPH62_03230 PF00933 Glycosyl hydrolase family 3 N terminal domain LPH62_03230 PF01915 Glycosyl hydrolase family 3 C-terminal domain LPH62_03230 PF14310 Fibronectin type III-like domain LPH62_03235 PF00924 Mechanosensitive ion channel LPH62_03240 PF02152 Dihydroneopterin aldolase LPH62_03245 PF00814 Glycoprotease family LPH62_03250 PF01165 Ribosomal protein S21 LPH62_03255 PF09424 Yqey-like protein LPH62_03260 PF03631 Virulence factor BrkB LPH62_03265 PF08278 DNA primase DnaG DnaB-binding LPH62_03265 PF08275 DNA primase catalytic core, N-terminal domain LPH62_03265 PF01807 CHC2 zinc finger LPH62_03265 PF10410 DnaB-helicase binding domain of primase LPH62_03275 PF00579 tRNA synthetases class I (W and Y) LPH62_03280 PF13538 UvrD-like helicase C-terminal domain LPH62_03285 PF12705 PD-(D/E)XK nuclease superfamily LPH62_03285 PF00580 UvrD/REP helicase N-terminal domain LPH62_03285 PF13361 UvrD-like helicase C-terminal domain LPH62_03290 PF17946 RecC C-terminal domain LPH62_03295 PF00005 ABC transporter LPH62_03300 PF02405 Permease MlaE LPH62_03305 PF02470 MlaD protein LPH62_03310 PF05494 MlaC protein LPH62_03320 PF04333 MlaA lipoprotein LPH62_03325 PF02646 RmuC family LPH62_03330 PF00005 ABC transporter LPH62_03345 PF13520 Amino acid permease LPH62_03355 PF17785 PUA-like domain LPH62_03355 PF10672 S-adenosylmethionine-dependent methyltransferase LPH62_03360 PF03741 Integral membrane protein TerC family LPH62_03375 PF01521 Iron-sulphur cluster biosynthesis LPH62_03390 PF00072 Response regulator receiver domain LPH62_03390 PF00486 Transcriptional regulatory protein, C terminal LPH62_03395 PF00672 HAMP domain LPH62_03395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH62_03395 PF00512 His Kinase A (phospho-acceptor) domain LPH62_03395 PF01627 Hpt domain LPH62_03395 PF00072 Response regulator receiver domain LPH62_03395 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LPH62_03400 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LPH62_03400 PF01627 Hpt domain LPH62_03400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH62_03400 PF00672 HAMP domain LPH62_03400 PF00512 His Kinase A (phospho-acceptor) domain LPH62_03400 PF00072 Response regulator receiver domain LPH62_03405 PF00210 Ferritin-like domain LPH62_03430 PF02773 S-adenosylmethionine synthetase, C-terminal domain LPH62_03430 PF02772 S-adenosylmethionine synthetase, central domain LPH62_03430 PF00438 S-adenosylmethionine synthetase, N-terminal domain LPH62_03440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH62_03445 PF00486 Transcriptional regulatory protein, C terminal LPH62_03445 PF00072 Response regulator receiver domain LPH62_03455 PF01207 Dihydrouridine synthase (Dus) LPH62_03460 PF00593 TonB dependent receptor LPH62_03460 PF07715 TonB-dependent Receptor Plug Domain LPH62_03475 PF07724 AAA domain (Cdc48 subfamily) LPH62_03475 PF17871 AAA lid domain LPH62_03475 PF00004 ATPase family associated with various cellular activities (AAA) LPH62_03475 PF02861 Clp amino terminal domain, pathogenicity island component LPH62_03475 PF10431 C-terminal, D2-small domain, of ClpB protein LPH62_03485 PF00301 Rubredoxin LPH62_03490 PF02581 Thiamine monophosphate synthase LPH62_03505 PF00067 Cytochrome P450 LPH62_03535 PF03796 DnaB-like helicase C terminal domain LPH62_03535 PF00772 DnaB-like helicase N terminal domain LPH62_03540 PF00691 OmpA family LPH62_03540 PF05736 OprF membrane domain LPH62_03550 PF00248 Aldo/keto reductase family LPH62_03555 PF00905 Penicillin binding protein transpeptidase domain LPH62_03555 PF00912 Transglycosylase LPH62_03555 PF17092 Penicillin-binding protein OB-like domain LPH62_03560 PF11104 Type IV pilus assembly protein PilM; LPH62_03565 PF05137 Fimbrial assembly protein (PilN) LPH62_03570 PF04350 Pilus assembly protein, PilO LPH62_03575 PF04351 Pilus assembly protein, PilP LPH62_03580 PF11741 AMIN domain LPH62_03580 PF00263 Bacterial type II and III secretion system protein LPH62_03580 PF03958 Bacterial type II/III secretion system short domain LPH62_03580 PF07660 Secretin and TonB N terminus short domain LPH62_03590 PF00884 Sulfatase LPH62_03590 PF08019 Phosphoethanolamine transferase EptA/EptB LPH62_03595 PF00067 Cytochrome P450 LPH62_03600 PF00270 DEAD/DEAH box helicase LPH62_03600 PF00271 Helicase conserved C-terminal domain LPH62_03600 PF17191 RecG wedge domain LPH62_03605 PF01042 Endoribonuclease L-PSP LPH62_03610 PF13291 ACT domain LPH62_03610 PF04607 Region found in RelA / SpoT proteins LPH62_03610 PF02824 TGS domain LPH62_03620 PF01565 FAD binding domain LPH62_03620 PF02913 FAD linked oxidases, C-terminal domain LPH62_03625 PF05736 OprF membrane domain LPH62_03625 PF00691 OmpA family LPH62_03630 PF02600 Disulfide bond formation protein DsbB LPH62_03635 PF07715 TonB-dependent Receptor Plug Domain LPH62_03635 PF00593 TonB dependent receptor LPH62_03640 PF02590 Predicted SPOUT methyltransferase LPH62_03655 PF04851 Type III restriction enzyme, res subunit LPH62_03655 PF02151 UvrB/uvrC motif LPH62_03655 PF12344 Ultra-violet resistance protein B LPH62_03655 PF17757 UvrB interaction domain LPH62_03655 PF00271 Helicase conserved C-terminal domain LPH62_03670 PF00701 Dihydrodipicolinate synthetase family LPH62_03680 PF00578 AhpC/TSA family LPH62_03685 PF13638 PIN domain LPH62_03685 PF02562 PhoH-like protein LPH62_03705 PF02769 AIR synthase related protein, C-terminal domain LPH62_03705 PF00586 AIR synthase related protein, N-terminal domain LPH62_03710 PF01029 NusB family LPH62_03715 PF00885 6,7-dimethyl-8-ribityllumazine synthase LPH62_03720 PF00925 GTP cyclohydrolase II LPH62_03720 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LPH62_03725 PF00677 Lumazine binding domain LPH62_03730 PF01872 RibD C-terminal domain LPH62_03730 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LPH62_03740 PF03477 ATP cone domain LPH62_03750 PF00464 Serine hydroxymethyltransferase LPH62_03755 PF12848 ABC transporter LPH62_03755 PF00005 ABC transporter LPH62_03760 PF06039 Malate:quinone oxidoreductase (Mqo) LPH62_03765 PF04134 Protein of unknown function, DUF393 LPH62_03770 PF02578 Multi-copper polyphenol oxidoreductase laccase LPH62_03775 PF01479 S4 domain LPH62_03775 PF00849 RNA pseudouridylate synthase LPH62_03780 PF13525 Outer membrane lipoprotein LPH62_03790 PF07670 Nucleoside recognition LPH62_03790 PF02421 Ferrous iron transport protein B LPH62_03790 PF07664 Ferrous iron transport protein B C terminus LPH62_03805 PF04386 Stringent starvation protein B LPH62_03810 PF02798 Glutathione S-transferase, N-terminal domain LPH62_03810 PF00043 Glutathione S-transferase, C-terminal domain LPH62_03830 PF01464 Transglycosylase SLT domain LPH62_03835 PF00919 Uncharacterized protein family UPF0004 LPH62_03835 PF01938 TRAM domain LPH62_03835 PF04055 Radical SAM superfamily LPH62_03840 PF02562 PhoH-like protein LPH62_03845 PF02130 Uncharacterized protein family UPF0054 LPH62_03855 PF03471 Transporter associated domain LPH62_03855 PF00571 CBS domain LPH62_03885 PF13332 Hemagglutinin repeat LPH62_03885 PF05860 haemagglutination activity domain LPH62_03885 PF04829 Pre-toxin domain with VENN motif LPH62_03890 PF04829 Pre-toxin domain with VENN motif LPH62_03890 PF13018 Extended Signal Peptide of Type V secretion system LPH62_03890 PF13332 Hemagglutinin repeat LPH62_03890 PF05860 haemagglutination activity domain LPH62_03895 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB LPH62_03895 PF08479 POTRA domain, ShlB-type LPH62_03895 PF17287 POTRA domain LPH62_03905 PF00521 DNA gyrase/topoisomerase IV, subunit A LPH62_03905 PF03989 DNA gyrase C-terminal domain, beta-propeller LPH62_03910 PF01008 Initiation factor 2 subunit family LPH62_03920 PF00152 tRNA synthetases class II (D, K and N) LPH62_03925 PF00583 Acetyltransferase (GNAT) family LPH62_03930 PF00533 BRCA1 C Terminus (BRCT) domain LPH62_03930 PF01653 NAD-dependent DNA ligase adenylation domain LPH62_03930 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LPH62_03930 PF12826 Helix-hairpin-helix motif LPH62_03930 PF03120 NAD-dependent DNA ligase OB-fold domain LPH62_03940 PF04354 ZipA, C-terminal FtsZ-binding domain LPH62_03945 PF02463 RecF/RecN/SMC N terminal domain LPH62_03950 PF01281 Ribosomal protein L9, N-terminal domain LPH62_03950 PF03948 Ribosomal protein L9, C-terminal domain LPH62_03955 PF01084 Ribosomal protein S18 LPH62_03960 PF01250 Ribosomal protein S6 LPH62_03965 PF01521 Iron-sulphur cluster biosynthesis LPH62_03970 PF00152 tRNA synthetases class II (D, K and N) LPH62_03970 PF01336 OB-fold nucleic acid binding domain LPH62_03975 PF01061 ABC-2 type transporter LPH62_03980 PF00005 ABC transporter LPH62_03990 PF01180 Dihydroorotate dehydrogenase LPH62_03995 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LPH62_03995 PF01565 FAD binding domain LPH62_04000 PF00892 EamA-like transporter family LPH62_04005 PF01569 PAP2 superfamily LPH62_04010 PF04551 GcpE protein LPH62_04020 PF00072 Response regulator receiver domain LPH62_04025 PF00889 Elongation factor TS LPH62_04030 PF00318 Ribosomal protein S2 LPH62_04045 PF00664 ABC transporter transmembrane region LPH62_04045 PF00005 ABC transporter LPH62_04060 PF02321 Outer membrane efflux protein LPH62_04065 PF12850 Calcineurin-like phosphoesterase superfamily domain LPH62_04070 PF02541 Ppx/GppA phosphatase family LPH62_04075 PF02503 Polyphosphate kinase middle domain LPH62_04075 PF13090 Polyphosphate kinase C-terminal domain 2 LPH62_04075 PF17941 Polyphosphate kinase C-terminal domain 1 LPH62_04075 PF13089 Polyphosphate kinase N-terminal domain LPH62_04080 PF00512 His Kinase A (phospho-acceptor) domain LPH62_04080 PF00989 PAS fold LPH62_04080 PF11808 Phosphate regulon sensor protein PhoR LPH62_04080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH62_04085 PF00486 Transcriptional regulatory protein, C terminal LPH62_04085 PF00072 Response regulator receiver domain LPH62_04090 PF01435 Peptidase family M48 LPH62_04090 PF13181 Tetratricopeptide repeat LPH62_04095 PF00462 Glutaredoxin LPH62_04100 PF00180 Isocitrate/isopropylmalate dehydrogenase LPH62_04110 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LPH62_04110 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LPH62_04120 PF00037 4Fe-4S binding domain LPH62_04120 PF11953 Domain of unknown function (DUF3470) LPH62_04130 PF01106 NifU-like domain LPH62_04135 PF01329 Pterin 4 alpha carbinolamine dehydratase LPH62_04150 PF01479 S4 domain LPH62_04150 PF00849 RNA pseudouridylate synthase LPH62_04155 PF12111 Polyribonucleotide phosphorylase C terminal LPH62_04155 PF00575 S1 RNA binding domain LPH62_04155 PF10150 Ribonuclease E/G family LPH62_04160 PF00196 Bacterial regulatory proteins, luxR family LPH62_04160 PF00072 Response regulator receiver domain LPH62_04165 PF17773 UPF0176 acylphosphatase like domain LPH62_04175 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LPH62_04175 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LPH62_04180 PF00545 ribonuclease LPH62_04190 PF00005 ABC transporter LPH62_04190 PF16326 ABC transporter C-terminal domain LPH62_04190 PF12848 ABC transporter LPH62_04195 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LPH62_04200 PF00313 'Cold-shock' DNA-binding domain LPH62_04210 PF01435 Peptidase family M48 LPH62_04215 PF03144 Elongation factor Tu domain 2 LPH62_04215 PF03143 Elongation factor Tu C-terminal domain LPH62_04215 PF00009 Elongation factor Tu GTP binding domain LPH62_04220 PF00679 Elongation factor G C-terminus LPH62_04220 PF14492 Elongation Factor G, domain II LPH62_04220 PF00009 Elongation factor Tu GTP binding domain LPH62_04220 PF03144 Elongation factor Tu domain 2 LPH62_04220 PF03764 Elongation factor G, domain IV LPH62_04225 PF00177 Ribosomal protein S7p/S5e LPH62_04230 PF00164 Ribosomal protein S12/S23 LPH62_04235 PF04998 RNA polymerase Rpb1, domain 5 LPH62_04235 PF05000 RNA polymerase Rpb1, domain 4 LPH62_04235 PF04983 RNA polymerase Rpb1, domain 3 LPH62_04235 PF00623 RNA polymerase Rpb1, domain 2 LPH62_04235 PF04997 RNA polymerase Rpb1, domain 1 LPH62_04240 PF04563 RNA polymerase beta subunit LPH62_04240 PF04560 RNA polymerase Rpb2, domain 7 LPH62_04240 PF00562 RNA polymerase Rpb2, domain 6 LPH62_04240 PF10385 RNA polymerase beta subunit external 1 domain LPH62_04240 PF04565 RNA polymerase Rpb2, domain 3 LPH62_04240 PF04561 RNA polymerase Rpb2, domain 2 LPH62_04245 PF16320 Ribosomal protein L7/L12 dimerisation domain LPH62_04245 PF00542 Ribosomal protein L7/L12 C-terminal domain LPH62_04250 PF00466 Ribosomal protein L10 LPH62_04255 PF00687 Ribosomal protein L1p/L10e family LPH62_04260 PF00298 Ribosomal protein L11, RNA binding domain LPH62_04260 PF03946 Ribosomal protein L11, N-terminal domain LPH62_04265 PF00467 KOW motif LPH62_04265 PF02357 Transcription termination factor nusG LPH62_04270 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LPH62_04280 PF03143 Elongation factor Tu C-terminal domain LPH62_04280 PF03144 Elongation factor Tu domain 2 LPH62_04280 PF00009 Elongation factor Tu GTP binding domain LPH62_04300 PF01926 50S ribosome-binding GTPase LPH62_04300 PF06071 Protein of unknown function (DUF933) LPH62_04305 PF01195 Peptidyl-tRNA hydrolase LPH62_04310 PF01386 Ribosomal L25p family LPH62_04310 PF14693 Ribosomal protein TL5, C-terminal domain LPH62_04315 PF14572 Phosphoribosyl synthetase-associated domain LPH62_04315 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LPH62_04325 PF08544 GHMP kinases C terminal LPH62_04325 PF00288 GHMP kinases N terminal domain LPH62_04330 PF03550 Outer membrane lipoprotein LolB LPH62_04340 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LPH62_04340 PF01488 Shikimate / quinate 5-dehydrogenase LPH62_04340 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LPH62_04345 PF03462 PCRF domain LPH62_04345 PF00472 RF-1 domain LPH62_04355 PF01170 Putative RNA methylase family UPF0020 LPH62_04355 PF02926 THUMP domain LPH62_04355 PF10672 S-adenosylmethionine-dependent methyltransferase LPH62_04415 PF00497 Bacterial extracellular solute-binding proteins, family 3 LPH62_04420 PF00528 Binding-protein-dependent transport system inner membrane component LPH62_04425 PF00005 ABC transporter LPH62_04430 PF00528 Binding-protein-dependent transport system inner membrane component LPH62_04435 PF13361 UvrD-like helicase C-terminal domain LPH62_04435 PF00580 UvrD/REP helicase N-terminal domain LPH62_04435 PF12705 PD-(D/E)XK nuclease superfamily LPH62_04445 PF01914 MarC family integral membrane protein LPH62_04450 PF00462 Glutaredoxin LPH62_04455 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LPH62_04455 PF02222 ATP-grasp domain LPH62_04460 PF00731 AIR carboxylase LPH62_04480 PF07731 Multicopper oxidase LPH62_04480 PF07732 Multicopper oxidase LPH62_04490 PF00580 UvrD/REP helicase N-terminal domain LPH62_04490 PF13361 UvrD-like helicase C-terminal domain LPH62_04500 PF04349 Periplasmic glucan biosynthesis protein, MdoG LPH62_04505 PF01343 Peptidase family S49 LPH62_04510 PF01554 MatE LPH62_04525 PF00270 DEAD/DEAH box helicase LPH62_04525 PF00271 Helicase conserved C-terminal domain LPH62_04525 PF17764 3′ DNA-binding domain (3′BD) LPH62_04525 PF18074 Primosomal protein N C-terminal domain LPH62_04525 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LPH62_04530 PF00140 Sigma-70 factor, region 1.2 LPH62_04530 PF04542 Sigma-70 region 2 LPH62_04530 PF04545 Sigma-70, region 4 LPH62_04535 PF03167 Uracil DNA glycosylase superfamily LPH62_04540 PF00072 Response regulator receiver domain LPH62_04540 PF01339 CheB methylesterase LPH62_04545 PF18075 FtsX extracellular domain LPH62_04550 PF00005 ABC transporter LPH62_04555 PF00270 DEAD/DEAH box helicase LPH62_04555 PF00271 Helicase conserved C-terminal domain LPH62_04555 PF12300 ATP-dependent RNA helicase RhlB LPH62_04560 PF00085 Thioredoxin LPH62_04565 PF07497 Rho termination factor, RNA-binding domain LPH62_04565 PF07498 Rho termination factor, N-terminal domain LPH62_04565 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LPH62_04570 PF03971 Monomeric isocitrate dehydrogenase LPH62_04575 PF09704 CRISPR-associated protein (Cas_Cas5) LPH62_04590 PF03572 Peptidase family S41 LPH62_04590 PF13180 PDZ domain LPH62_04595 PF01551 Peptidase family M23 LPH62_04605 PF00150 Cellulase (glycosyl hydrolase family 5) LPH62_04625 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LPH62_04625 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPH62_04630 PF00310 Glutamine amidotransferases class-II LPH62_04630 PF04898 Glutamate synthase central domain LPH62_04630 PF01645 Conserved region in glutamate synthase LPH62_04630 PF01493 GXGXG motif LPH62_04640 PF14748 Pyrroline-5-carboxylate reductase dimerisation LPH62_04640 PF03807 NADP oxidoreductase coenzyme F420-dependent LPH62_04725 PF13332 Hemagglutinin repeat LPH62_04725 PF05860 haemagglutination activity domain LPH62_04725 PF04829 Pre-toxin domain with VENN motif LPH62_04730 PF13018 Extended Signal Peptide of Type V secretion system LPH62_04730 PF13332 Hemagglutinin repeat LPH62_04730 PF05860 haemagglutination activity domain LPH62_04730 PF04829 Pre-toxin domain with VENN motif LPH62_04770 PF12008 Type I restriction and modification enzyme - subunit R C terminal LPH62_04770 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LPH62_04770 PF18766 SWI2/SNF2 ATPase LPH62_04775 PF01420 Type I restriction modification DNA specificity domain LPH62_04785 PF12161 HsdM N-terminal domain LPH62_04785 PF02384 N-6 DNA Methylase LPH62_04870 PF11867 Domain of unknown function (DUF3387) LPH62_04870 PF18766 SWI2/SNF2 ATPase LPH62_04870 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LPH62_04875 PF01420 Type I restriction modification DNA specificity domain LPH62_04880 PF02384 N-6 DNA Methylase LPH62_04885 PF02384 N-6 DNA Methylase LPH62_04995 PF01638 HxlR-like helix-turn-helix LPH62_05000 PF00106 short chain dehydrogenase LPH62_05020 PF00905 Penicillin binding protein transpeptidase domain LPH62_05020 PF00912 Transglycosylase LPH62_05020 PF14814 Bifunctional transglycosylase second domain LPH62_05030 PF04851 Type III restriction enzyme, res subunit LPH62_05030 PF13307 Helicase C-terminal domain LPH62_05040 PF00484 Carbonic anhydrase LPH62_05045 PF00534 Glycosyl transferases group 1 LPH62_05050 PF01522 Polysaccharide deacetylase LPH62_05060 PF00005 ABC transporter LPH62_05060 PF09383 NIL domain LPH62_05065 PF00528 Binding-protein-dependent transport system inner membrane component LPH62_05070 PF03180 NLPA lipoprotein LPH62_05085 PF02817 e3 binding domain LPH62_05085 PF00364 Biotin-requiring enzyme LPH62_05085 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LPH62_05090 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LPH62_05090 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPH62_05100 PF01545 Cation efflux family LPH62_05105 PF01053 Cys/Met metabolism PLP-dependent enzyme LPH62_05110 PF00561 alpha/beta hydrolase fold LPH62_05115 PF01551 Peptidase family M23 LPH62_05125 PF01975 Survival protein SurE LPH62_05140 PF01551 Peptidase family M23 LPH62_05140 PF01476 LysM domain LPH62_05155 PF01168 Alanine racemase, N-terminal domain LPH62_05155 PF00842 Alanine racemase, C-terminal domain LPH62_05160 PF01266 FAD dependent oxidoreductase LPH62_05170 PF01641 SelR domain LPH62_05180 PF00728 Glycosyl hydrolase family 20, catalytic domain LPH62_05180 PF02838 Glycosyl hydrolase family 20, domain 2 LPH62_05180 PF07691 PA14 domain LPH62_05190 PF07691 PA14 domain LPH62_05190 PF01915 Glycosyl hydrolase family 3 C-terminal domain LPH62_05190 PF00933 Glycosyl hydrolase family 3 N terminal domain LPH62_05190 PF14310 Fibronectin type III-like domain LPH62_05205 PF17678 Glycosyl hydrolase family 92 N-terminal domain LPH62_05205 PF07971 Glycosyl hydrolase family 92 LPH62_05210 PF01301 Glycosyl hydrolases family 35 LPH62_05215 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LPH62_05220 PF00639 PPIC-type PPIASE domain LPH62_05220 PF09312 SurA N-terminal domain LPH62_05225 PF04453 LPS transport system D LPH62_05235 PF01494 FAD binding domain LPH62_05240 PF01494 FAD binding domain LPH62_05245 PF06719 AraC-type transcriptional regulator N-terminus LPH62_05245 PF12833 Helix-turn-helix domain LPH62_05250 PF02525 Flavodoxin-like fold LPH62_05260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH62_05260 PF03466 LysR substrate binding domain LPH62_05265 PF10414 Sirohaem synthase dimerisation region LPH62_05265 PF14824 Sirohaem biosynthesis protein central LPH62_05265 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LPH62_05270 PF00291 Pyridoxal-phosphate dependent enzyme LPH62_05280 PF00274 Fructose-bisphosphate aldolase class-I LPH62_05295 PF02887 Pyruvate kinase, alpha/beta domain LPH62_05295 PF00224 Pyruvate kinase, barrel domain LPH62_05300 PF00162 Phosphoglycerate kinase LPH62_05315 PF00749 tRNA synthetases class I (E and Q), catalytic domain LPH62_05320 PF01475 Ferric uptake regulator family LPH62_05335 PF00553 Cellulose binding domain LPH62_05335 PF00150 Cellulase (glycosyl hydrolase family 5) LPH62_05345 PF00675 Insulinase (Peptidase family M16) LPH62_05345 PF05193 Peptidase M16 inactive domain LPH62_05360 PF03330 Lytic transglycolase LPH62_05365 PF07516 SecA Wing and Scaffold domain LPH62_05365 PF01043 SecA preprotein cross-linking domain LPH62_05365 PF07517 SecA DEAD-like domain LPH62_05365 PF02810 SEC-C motif LPH62_05370 PF01551 Peptidase family M23 LPH62_05370 PF08525 Opacity-associated protein A N-terminal motif LPH62_05370 PF01476 LysM domain LPH62_05380 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LPH62_05385 PF00091 Tubulin/FtsZ family, GTPase domain LPH62_05385 PF12327 FtsZ family, C-terminal domain LPH62_05390 PF02491 SHS2 domain inserted in FTSA LPH62_05395 PF03799 Cell division protein FtsQ LPH62_05395 PF08478 POTRA domain, FtsQ-type LPH62_05400 PF07478 D-ala D-ala ligase C-terminus LPH62_05405 PF01225 Mur ligase family, catalytic domain LPH62_05405 PF02875 Mur ligase family, glutamate ligase domain LPH62_05405 PF08245 Mur ligase middle domain LPH62_05410 PF04101 Glycosyltransferase family 28 C-terminal domain LPH62_05410 PF03033 Glycosyltransferase family 28 N-terminal domain LPH62_05415 PF01098 Cell cycle protein LPH62_05420 PF00953 Glycosyl transferase family 4 LPH62_05425 PF08245 Mur ligase middle domain LPH62_05425 PF02875 Mur ligase family, glutamate ligase domain LPH62_05425 PF01225 Mur ligase family, catalytic domain LPH62_05430 PF01225 Mur ligase family, catalytic domain LPH62_05430 PF08245 Mur ligase middle domain LPH62_05430 PF02875 Mur ligase family, glutamate ligase domain LPH62_05435 PF03717 Penicillin-binding Protein dimerisation domain LPH62_05435 PF00905 Penicillin binding protein transpeptidase domain LPH62_05440 PF04999 Cell division protein FtsL LPH62_05445 PF01795 MraW methylase family LPH62_05450 PF02381 MraZ protein, putative antitoxin-like LPH62_05455 PF02080 TrkA-C domain LPH62_05455 PF03600 Citrate transporter LPH62_05460 PF02390 Putative methyltransferase LPH62_05465 PF05690 Thiazole biosynthesis protein ThiG LPH62_05475 PF03797 Autotransporter beta-domain LPH62_05475 PF00657 GDSL-like Lipase/Acylhydrolase LPH62_05505 PF07977 FabA-like domain LPH62_05530 PF00692 dUTPase LPH62_05540 PF01119 DNA mismatch repair protein, C-terminal domain LPH62_05540 PF08676 MutL C terminal dimerisation domain LPH62_05545 PF01520 N-acetylmuramoyl-L-alanine amidase LPH62_05545 PF11741 AMIN domain LPH62_05550 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LPH62_05555 PF03853 YjeF-related protein N-terminus LPH62_05555 PF01256 Carbohydrate kinase LPH62_05560 PF13742 OB-fold nucleic acid binding domain LPH62_05560 PF02601 Exonuclease VII, large subunit LPH62_05575 PF00570 HRDC domain LPH62_05575 PF01612 3'-5' exonuclease LPH62_05605 PF00216 Bacterial DNA-binding protein LPH62_05610 PF03147 Ferredoxin-fold anticodon binding domain LPH62_05610 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LPH62_05610 PF01588 Putative tRNA binding domain LPH62_05610 PF03484 tRNA synthetase B5 domain LPH62_05610 PF03483 B3/4 domain LPH62_05615 PF01409 tRNA synthetases class II core domain (F) LPH62_05615 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LPH62_05620 PF00453 Ribosomal protein L20 LPH62_05625 PF01632 Ribosomal protein L35 LPH62_05630 PF00707 Translation initiation factor IF-3, C-terminal domain LPH62_05630 PF05198 Translation initiation factor IF-3, N-terminal domain LPH62_05635 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LPH62_05635 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LPH62_05635 PF02824 TGS domain LPH62_05635 PF03129 Anticodon binding domain LPH62_05645 PF18030 RimK PreATP-grasp domain LPH62_05645 PF08443 RimK-like ATP-grasp domain LPH62_05650 PF00486 Transcriptional regulatory protein, C terminal LPH62_05650 PF00072 Response regulator receiver domain LPH62_05655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH62_05655 PF00512 His Kinase A (phospho-acceptor) domain LPH62_05655 PF00989 PAS fold LPH62_05655 PF11808 Phosphate regulon sensor protein PhoR LPH62_05660 PF01121 Dephospho-CoA kinase LPH62_05665 PF06750 Bacterial Peptidase A24 N-terminal domain LPH62_05665 PF01478 Type IV leader peptidase family LPH62_05670 PF00482 Type II secretion system (T2SS), protein F LPH62_05675 PF00114 Pilin (bacterial filament) LPH62_05675 PF07963 Prokaryotic N-terminal methylation motif LPH62_05690 PF07963 Prokaryotic N-terminal methylation motif LPH62_05690 PF00114 Pilin (bacterial filament) LPH62_05695 PF00114 Pilin (bacterial filament) LPH62_05695 PF07963 Prokaryotic N-terminal methylation motif LPH62_05705 PF00437 Type II/IV secretion system protein LPH62_05705 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LPH62_05710 PF02954 Bacterial regulatory protein, Fis family LPH62_05710 PF00072 Response regulator receiver domain LPH62_05710 PF00158 Sigma-54 interaction domain LPH62_05715 PF00512 His Kinase A (phospho-acceptor) domain LPH62_05715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH62_05720 PF00549 CoA-ligase LPH62_05720 PF08442 ATP-grasp domain LPH62_05725 PF00549 CoA-ligase LPH62_05725 PF02629 CoA binding domain LPH62_05730 PF01926 50S ribosome-binding GTPase LPH62_05730 PF12631 MnmE helical domain LPH62_05730 PF10396 GTP-binding protein TrmE N-terminus LPH62_05740 PF02096 60Kd inner membrane protein LPH62_05740 PF14849 YidC periplasmic domain LPH62_05745 PF00825 Ribonuclease P LPH62_05750 PF00468 Ribosomal protein L34 LPH62_05755 PF00308 Bacterial dnaA protein LPH62_05755 PF08299 Bacterial dnaA protein helix-turn-helix LPH62_05755 PF11638 DnaA N-terminal domain LPH62_05760 PF02767 DNA polymerase III beta subunit, central domain LPH62_05760 PF00712 DNA polymerase III beta subunit, N-terminal domain LPH62_05760 PF02768 DNA polymerase III beta subunit, C-terminal domain LPH62_05765 PF02463 RecF/RecN/SMC N terminal domain LPH62_05770 PF00204 DNA gyrase B LPH62_05770 PF00986 DNA gyrase B subunit, carboxyl terminus LPH62_05770 PF18053 DNA gyrase B subunit insert domain LPH62_05770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH62_05770 PF01751 Toprim domain LPH62_05780 PF01435 Peptidase family M48 LPH62_05790 PF03544 Gram-negative bacterial TonB protein C-terminal LPH62_05795 PF01618 MotA/TolQ/ExbB proton channel family LPH62_05800 PF02472 Biopolymer transport protein ExbD/TolR LPH62_05805 PF02472 Biopolymer transport protein ExbD/TolR LPH62_05825 PF01218 Coproporphyrinogen III oxidase LPH62_05850 PF00793 DAHP synthetase I family LPH62_05855 PF07963 Prokaryotic N-terminal methylation motif LPH62_05855 PF00114 Pilin (bacterial filament) LPH62_05875 PF05567 Neisseria PilC beta-propeller domain LPH62_05880 PF00114 Pilin (bacterial filament) LPH62_05880 PF07963 Prokaryotic N-terminal methylation motif LPH62_05885 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LPH62_05890 PF00155 Aminotransferase class I and II LPH62_05895 PF01741 Large-conductance mechanosensitive channel, MscL LPH62_05920 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ LPH62_05930 PF17757 UvrB interaction domain LPH62_05930 PF03461 TRCF domain LPH62_05930 PF00271 Helicase conserved C-terminal domain LPH62_05930 PF00270 DEAD/DEAH box helicase LPH62_05930 PF02559 CarD-like/TRCF domain LPH62_05935 PF01220 Dehydroquinase class II LPH62_05940 PF00364 Biotin-requiring enzyme LPH62_05945 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LPH62_05945 PF00289 Biotin carboxylase, N-terminal domain LPH62_05945 PF02785 Biotin carboxylase C-terminal domain LPH62_05950 PF13361 UvrD-like helicase C-terminal domain LPH62_05950 PF00580 UvrD/REP helicase N-terminal domain LPH62_05955 PF00970 Oxidoreductase FAD-binding domain LPH62_05955 PF00175 Oxidoreductase NAD-binding domain LPH62_05955 PF00042 Globin LPH62_05965 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ LPH62_05975 PF08535 KorB domain LPH62_05975 PF06613 KorB C-terminal beta-barrel domain LPH62_05975 PF02195 ParB-like nuclease domain LPH62_05990 PF06968 Biotin and Thiamin Synthesis associated domain LPH62_05990 PF04055 Radical SAM superfamily LPH62_05995 PF01734 Patatin-like phospholipase LPH62_06000 PF01040 UbiA prenyltransferase family LPH62_06020 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family LPH62_06055 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LPH62_06055 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LPH62_06065 PF02881 SRP54-type protein, helical bundle domain LPH62_06065 PF02978 Signal peptide binding domain LPH62_06065 PF00448 SRP54-type protein, GTPase domain LPH62_06085 PF00577 Outer membrane usher protein LPH62_06085 PF13954 PapC N-terminal domain LPH62_06085 PF13953 PapC C-terminal domain LPH62_06090 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LPH62_06090 PF02753 Pili assembly chaperone PapD, C-terminal domain LPH62_06095 PF16970 Type-1 fimbrial protein, A LPH62_06100 PF02464 Competence-damaged protein LPH62_06105 PF00083 Sugar (and other) transporter LPH62_06110 PF01926 50S ribosome-binding GTPase LPH62_06110 PF13167 GTP-binding GTPase N-terminal LPH62_06110 PF16360 GTP-binding GTPase Middle Region LPH62_06115 PF17209 Hfq protein LPH62_06125 PF00809 Pterin binding enzyme LPH62_06130 PF00004 ATPase family associated with various cellular activities (AAA) LPH62_06130 PF06480 FtsH Extracellular LPH62_06130 PF01434 Peptidase family M41 LPH62_06130 PF17862 AAA+ lid domain LPH62_06135 PF01728 FtsJ-like methyltransferase LPH62_06140 PF01985 CRS1 / YhbY (CRM) domain LPH62_06155 PF00920 Dehydratase family LPH62_06185 PF03279 Bacterial lipid A biosynthesis acyltransferase LPH62_06190 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) LPH62_06205 PF00886 Ribosomal protein S16 LPH62_06210 PF01782 RimM N-terminal domain LPH62_06210 PF05239 PRC-barrel domain LPH62_06215 PF01746 tRNA (Guanine-1)-methyltransferase LPH62_06220 PF01245 Ribosomal protein L19 LPH62_06225 PF00557 Metallopeptidase family M24 LPH62_06235 PF14602 Hexapeptide repeat of succinyl-transferase LPH62_06235 PF00132 Bacterial transferase hexapeptide (six repeats) LPH62_06235 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal LPH62_06240 PF03960 ArsC family LPH62_06245 PF01546 Peptidase family M20/M25/M40 LPH62_06245 PF07687 Peptidase dimerisation domain LPH62_06250 PF13537 Glutamine amidotransferase domain LPH62_06250 PF00733 Asparagine synthase LPH62_06260 PF03060 Nitronate monooxygenase LPH62_06270 PF00717 Peptidase S24-like LPH62_06270 PF01726 LexA DNA binding domain LPH62_06275 PF00154 recA bacterial DNA recombination protein LPH62_06280 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LPH62_06280 PF01411 tRNA synthetases class II (A) LPH62_06280 PF02272 DHHA1 domain LPH62_06285 PF02599 Global regulator protein family LPH62_06295 PF01432 Peptidase family M3 LPH62_06310 PF07731 Multicopper oxidase LPH62_06310 PF07732 Multicopper oxidase LPH62_06310 PF00394 Multicopper oxidase LPH62_06315 PF05275 Copper resistance protein B precursor (CopB) LPH62_06320 PF08264 Anticodon-binding domain of tRNA LPH62_06320 PF00133 tRNA synthetases class I (I, L, M and V) LPH62_06320 PF10458 Valyl tRNA synthetase tRNA binding arm LPH62_06340 PF00883 Cytosol aminopeptidase family, catalytic domain LPH62_06340 PF02789 Cytosol aminopeptidase family, N-terminal domain LPH62_06360 PF01380 SIS domain LPH62_06375 PF17284 Spermidine synthase tetramerisation domain LPH62_06380 PF17810 Arginine decarboxylase helical bundle domain LPH62_06380 PF17944 Arginine decarboxylase C-terminal helical extension LPH62_06380 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LPH62_06385 PF00106 short chain dehydrogenase LPH62_06395 PF03485 Arginyl tRNA synthetase N terminal domain LPH62_06395 PF00750 tRNA synthetases class I (R) LPH62_06395 PF05746 DALR anticodon binding domain LPH62_06400 PF04002 RadC-like JAB domain LPH62_06405 PF04127 DNA / pantothenate metabolism flavoprotein LPH62_06405 PF02441 Flavoprotein LPH62_06410 PF00692 dUTPase LPH62_06415 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LPH62_06415 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LPH62_06415 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LPH62_06415 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LPH62_06425 PF00156 Phosphoribosyl transferase domain LPH62_06475 PF07690 Major Facilitator Superfamily LPH62_06480 PF03702 Anhydro-N-acetylmuramic acid kinase LPH62_06485 PF04225 Opacity-associated protein A LysM-like domain LPH62_06485 PF01551 Peptidase family M23 LPH62_06490 PF00579 tRNA synthetases class I (W and Y) LPH62_06520 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LPH62_06520 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LPH62_06550 PF16658 Class II release factor RF3, C-terminal domain LPH62_06550 PF00009 Elongation factor Tu GTP binding domain LPH62_06555 PF03006 Haemolysin-III related LPH62_06560 PF00535 Glycosyl transferase family 2 LPH62_06565 PF01026 TatD related DNase LPH62_06580 PF01597 Glycine cleavage H-protein LPH62_06585 PF08669 Glycine cleavage T-protein C-terminal barrel domain LPH62_06585 PF01571 Aminomethyltransferase folate-binding domain LPH62_06595 PF16200 C-terminal region of band_7 LPH62_06595 PF01145 SPFH domain / Band 7 family LPH62_06600 PF03819 MazG nucleotide pyrophosphohydrolase domain LPH62_06605 PF00459 Inositol monophosphatase family LPH62_06610 PF00293 NUDIX domain LPH62_06615 PF00202 Aminotransferase class-III LPH62_06620 PF04452 RNA methyltransferase LPH62_06630 PF00271 Helicase conserved C-terminal domain LPH62_06630 PF00270 DEAD/DEAH box helicase LPH62_06635 PF01242 6-pyruvoyl tetrahydropterin synthase LPH62_06660 PF03653 Uncharacterised protein family (UPF0093) LPH62_06665 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LPH62_06670 PF14579 Helix-hairpin-helix motif LPH62_06670 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LPH62_06670 PF07733 Bacterial DNA polymerase III alpha NTPase domain LPH62_06670 PF01336 OB-fold nucleic acid binding domain LPH62_06670 PF02811 PHP domain LPH62_06675 PF01259 SAICAR synthetase LPH62_06680 PF05099 Tellurite resistance protein TerB LPH62_06680 PF00226 DnaJ domain LPH62_06685 PF00834 Ribulose-phosphate 3 epimerase family LPH62_06695 PF00425 chorismate binding enzyme LPH62_06695 PF04715 Anthranilate synthase component I, N terminal region LPH62_06700 PF00117 Glutamine amidotransferase class-I LPH62_06705 PF00591 Glycosyl transferase family, a/b domain LPH62_06705 PF02885 Glycosyl transferase family, helical bundle domain LPH62_06710 PF00218 Indole-3-glycerol phosphate synthase LPH62_06725 PF12849 PBP superfamily domain LPH62_06745 PF01321 Creatinase/Prolidase N-terminal domain LPH62_06745 PF00557 Metallopeptidase family M24 LPH62_06760 PF01702 Queuine tRNA-ribosyltransferase LPH62_06765 PF02699 Preprotein translocase subunit LPH62_06770 PF07549 SecD/SecF GG Motif LPH62_06770 PF13721 SecD export protein N-terminal TM region LPH62_06770 PF02355 Protein export membrane protein LPH62_06775 PF07549 SecD/SecF GG Motif LPH62_06775 PF02355 Protein export membrane protein LPH62_06785 PF01743 Poly A polymerase head domain LPH62_06785 PF12626 Polymerase A arginine-rich C-terminus LPH62_06785 PF12627 Probable RNA and SrmB- binding site of polymerase A LPH62_06790 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LPH62_06795 PF02548 Ketopantoate hydroxymethyltransferase LPH62_06800 PF02569 Pantoate-beta-alanine ligase LPH62_06805 PF02261 Aspartate decarboxylase LPH62_06810 PF00342 Phosphoglucose isomerase LPH62_06820 PF17384 RimP C-terminal SH3 domain LPH62_06820 PF02576 RimP N-terminal domain LPH62_06825 PF00575 S1 RNA binding domain LPH62_06825 PF13184 NusA-like KH domain LPH62_06825 PF08529 NusA N-terminal domain LPH62_06830 PF00009 Elongation factor Tu GTP binding domain LPH62_06830 PF11987 Translation-initiation factor 2 LPH62_06830 PF08364 Bacterial translation initiation factor IF-2 associated region LPH62_06830 PF04760 Translation initiation factor IF-2, N-terminal region LPH62_06835 PF02033 Ribosome-binding factor A LPH62_06840 PF16198 tRNA pseudouridylate synthase B C-terminal domain LPH62_06840 PF01509 TruB family pseudouridylate synthase (N terminal domain) LPH62_06840 PF09157 Pseudouridine synthase II TruB, C-terminal LPH62_06845 PF00312 Ribosomal protein S15 LPH62_06850 PF00013 KH domain LPH62_06850 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LPH62_06850 PF01138 3' exoribonuclease family, domain 1 LPH62_06850 PF03725 3' exoribonuclease family, domain 2 LPH62_06850 PF00575 S1 RNA binding domain LPH62_06855 PF01638 HxlR-like helix-turn-helix LPH62_06860 PF05368 NmrA-like family LPH62_06865 PF00873 AcrB/AcrD/AcrF family LPH62_06875 PF00999 Sodium/hydrogen exchanger family LPH62_06895 PF00271 Helicase conserved C-terminal domain LPH62_06895 PF00270 DEAD/DEAH box helicase LPH62_06895 PF03880 DbpA RNA binding domain LPH62_06900 PF00766 Electron transfer flavoprotein FAD-binding domain LPH62_06900 PF01012 Electron transfer flavoprotein domain LPH62_06905 PF01012 Electron transfer flavoprotein domain LPH62_06910 PF16363 GDP-mannose 4,6 dehydratase LPH62_06915 PF00483 Nucleotidyl transferase LPH62_06920 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LPH62_06925 PF04321 RmlD substrate binding domain LPH62_06930 PF01050 Mannose-6-phosphate isomerase LPH62_06930 PF00483 Nucleotidyl transferase LPH62_06935 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LPH62_06935 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LPH62_06935 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LPH62_06935 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LPH62_06985 PF00082 Subtilase family LPH62_06985 PF03797 Autotransporter beta-domain LPH62_06985 PF12951 Passenger-associated-transport-repeat LPH62_06990 PF00082 Subtilase family LPH62_06990 PF12951 Passenger-associated-transport-repeat LPH62_06990 PF03797 Autotransporter beta-domain LPH62_06995 PF06779 Uncharacterised MFS-type transporter YbfB LPH62_07000 PF07669 Eco57I restriction-modification methylase LPH62_07010 PF00365 Phosphofructokinase LPH62_07020 PF08245 Mur ligase middle domain LPH62_07020 PF02875 Mur ligase family, glutamate ligase domain LPH62_07020 PF01225 Mur ligase family, catalytic domain LPH62_07025 PF01569 PAP2 superfamily LPH62_07045 PF00892 EamA-like transporter family LPH62_07050 PF02789 Cytosol aminopeptidase family, N-terminal domain LPH62_07050 PF00883 Cytosol aminopeptidase family, catalytic domain LPH62_07060 PF01594 AI-2E family transporter LPH62_07080 PF00595 PDZ domain LPH62_07085 PF01370 NAD dependent epimerase/dehydratase family LPH62_07085 PF08338 Domain of unknown function (DUF1731) LPH62_07090 PF13193 AMP-binding enzyme C-terminal domain LPH62_07090 PF00501 AMP-binding enzyme LPH62_07095 PF00694 Aconitase C-terminal domain LPH62_07095 PF00330 Aconitase family (aconitate hydratase) LPH62_07110 PF11791 Aconitate B N-terminal domain LPH62_07110 PF06434 Aconitate hydratase 2 N-terminus LPH62_07110 PF00330 Aconitase family (aconitate hydratase) LPH62_07125 PF02384 N-6 DNA Methylase LPH62_07130 PF01420 Type I restriction modification DNA specificity domain LPH62_07145 PF18766 SWI2/SNF2 ATPase LPH62_07145 PF11867 Domain of unknown function (DUF3387) LPH62_07145 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LPH62_07165 PF00121 Triosephosphate isomerase LPH62_07180 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LPH62_07185 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LPH62_07190 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LPH62_07195 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LPH62_07205 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LPH62_07205 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LPH62_07205 PF10531 SLBB domain LPH62_07210 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal LPH62_07210 PF00384 Molybdopterin oxidoreductase LPH62_07210 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LPH62_07215 PF00146 NADH dehydrogenase LPH62_07220 PF12838 4Fe-4S dicluster domain LPH62_07225 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LPH62_07230 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LPH62_07235 PF00361 Proton-conducting membrane transporter LPH62_07235 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LPH62_07240 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus LPH62_07240 PF00361 Proton-conducting membrane transporter LPH62_07245 PF00361 Proton-conducting membrane transporter LPH62_07250 PF00106 short chain dehydrogenase LPH62_07255 PF03600 Citrate transporter LPH62_07265 PF00486 Transcriptional regulatory protein, C terminal LPH62_07265 PF00072 Response regulator receiver domain LPH62_07270 PF08521 Two-component sensor kinase N-terminal LPH62_07270 PF00512 His Kinase A (phospho-acceptor) domain LPH62_07270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH62_07280 PF00196 Bacterial regulatory proteins, luxR family LPH62_07280 PF00072 Response regulator receiver domain LPH62_07285 PF00672 HAMP domain LPH62_07285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH62_07285 PF00512 His Kinase A (phospho-acceptor) domain LPH62_07285 PF00072 Response regulator receiver domain LPH62_07285 PF01627 Hpt domain LPH62_07295 PF00375 Sodium:dicarboxylate symporter family LPH62_07300 PF01515 Phosphate acetyl/butaryl transferase LPH62_07300 PF03949 Malic enzyme, NAD binding domain LPH62_07300 PF00390 Malic enzyme, N-terminal domain LPH62_07305 PF00183 Hsp90 protein LPH62_07305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH62_07315 PF01467 Cytidylyltransferase-like LPH62_07325 PF00037 4Fe-4S binding domain LPH62_07335 PF00990 Diguanylate cyclase, GGDEF domain LPH62_07340 PF01551 Peptidase family M23 LPH62_07340 PF01476 LysM domain LPH62_07345 PF01979 Amidohydrolase family LPH62_07350 PF01809 Putative membrane protein insertion efficiency factor LPH62_07355 PF01258 Prokaryotic dksA/traR C4-type zinc finger LPH62_07385 PF02657 Fe-S metabolism associated domain LPH62_07390 PF09190 DALR domain LPH62_07390 PF01406 tRNA synthetases class I (C) catalytic domain LPH62_07400 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LPH62_07400 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LPH62_07405 PF00764 Arginosuccinate synthase LPH62_07410 PF07687 Peptidase dimerisation domain LPH62_07410 PF01546 Peptidase family M20/M25/M40 LPH62_07415 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase LPH62_07415 PF00696 Amino acid kinase family LPH62_07425 PF01118 Semialdehyde dehydrogenase, NAD binding domain LPH62_07430 PF00206 Lyase LPH62_07440 PF01472 PUA domain LPH62_07440 PF00696 Amino acid kinase family LPH62_07445 PF00171 Aldehyde dehydrogenase family LPH62_07455 PF02796 Helix-turn-helix domain of resolvase LPH62_07455 PF00239 Resolvase, N terminal domain LPH62_07480 PF00239 Resolvase, N terminal domain LPH62_07480 PF02796 Helix-turn-helix domain of resolvase LPH62_07495 PF13700 Domain of unknown function (DUF4158) LPH62_07495 PF01526 Tn3 transposase DDE domain LPH62_07525 PF03524 Conjugal transfer protein LPH62_07565 PF01593 Flavin containing amine oxidoreductase LPH62_07575 PF02627 Carboxymuconolactone decarboxylase family LPH62_07595 PF03466 LysR substrate binding domain LPH62_07595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH62_07600 PF05016 ParE toxin of type II toxin-antitoxin system, parDE LPH62_07605 PF09386 Antitoxin ParD LPH62_07610 PF02796 Helix-turn-helix domain of resolvase LPH62_07610 PF00239 Resolvase, N terminal domain LPH62_07635 PF02796 Helix-turn-helix domain of resolvase LPH62_07635 PF00239 Resolvase, N terminal domain LPH62_07675 PF06594 Haemolysin-type calcium binding protein related domain LPH62_07675 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) LPH62_07680 PF14437 MafB19-like deaminase LPH62_07685 PF01325 Iron dependent repressor, N-terminal DNA binding domain LPH62_07685 PF02742 Iron dependent repressor, metal binding and dimerisation domain LPH62_07690 PF01566 Natural resistance-associated macrophage protein LPH62_07705 PF04377 Arginine-tRNA-protein transferase, C terminus LPH62_07705 PF04376 Arginine-tRNA-protein transferase, N terminus LPH62_07740 PF00082 Subtilase family LPH62_07740 PF12951 Passenger-associated-transport-repeat LPH62_07740 PF03797 Autotransporter beta-domain LPH62_07765 PF01553 Acyltransferase LPH62_07775 PF05221 S-adenosyl-L-homocysteine hydrolase LPH62_07775 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain LPH62_07790 PF01351 Ribonuclease HII LPH62_07795 PF02684 Lipid-A-disaccharide synthetase LPH62_07800 PF00132 Bacterial transferase hexapeptide (six repeats) LPH62_07800 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LPH62_07805 PF07977 FabA-like domain LPH62_07810 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LPH62_07810 PF00132 Bacterial transferase hexapeptide (six repeats) LPH62_07815 PF07244 Surface antigen variable number repeat LPH62_07815 PF01103 Surface antigen LPH62_07820 PF17820 PDZ domain LPH62_07820 PF02163 Peptidase family M50 LPH62_07825 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LPH62_07825 PF13288 DXP reductoisomerase C-terminal domain LPH62_07825 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LPH62_07835 PF01255 Putative undecaprenyl diphosphate synthase LPH62_07840 PF01765 Ribosome recycling factor LPH62_07865 PF04305 Protein of unknown function (DUF455) LPH62_07870 PF00696 Amino acid kinase family LPH62_07940 PF01081 KDPG and KHG aldolase LPH62_07945 PF00920 Dehydratase family LPH62_07950 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LPH62_07955 PF02685 Glucokinase LPH62_07960 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LPH62_07960 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LPH62_07965 PF17912 MalK OB fold domain LPH62_07965 PF00005 ABC transporter LPH62_07980 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LPH62_07985 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LPH62_07990 PF02910 Fumarate reductase flavoprotein C-term LPH62_07990 PF00890 FAD binding domain LPH62_07995 PF13085 2Fe-2S iron-sulfur cluster binding domain LPH62_07995 PF13237 4Fe-4S dicluster domain LPH62_08000 PF03937 Flavinator of succinate dehydrogenase LPH62_08010 PF12704 MacB-like periplasmic core domain LPH62_08010 PF02687 FtsX-like permease family LPH62_08015 PF00005 ABC transporter LPH62_08020 PF03772 Competence protein LPH62_08020 PF00753 Metallo-beta-lactamase superfamily LPH62_08035 PF00005 ABC transporter LPH62_08035 PF00664 ABC transporter transmembrane region LPH62_08040 PF02606 Tetraacyldisaccharide-1-P 4'-kinase LPH62_08045 PF01883 Iron-sulfur cluster assembly protein LPH62_08045 PF10609 NUBPL iron-transfer P-loop NTPase LPH62_08060 PF13091 PLD-like domain LPH62_08085 PF03358 NADPH-dependent FMN reductase LPH62_08090 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LPH62_08090 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LPH62_08105 PF01300 Telomere recombination LPH62_08110 PF01751 Toprim domain LPH62_08110 PF13368 Topoisomerase C-terminal repeat LPH62_08110 PF01131 DNA topoisomerase LPH62_08120 PF04361 Protein of unknown function (DUF494) LPH62_08125 PF17782 DprA winged helix domain LPH62_08125 PF02481 DNA recombination-mediator protein A LPH62_08135 PF01327 Polypeptide deformylase LPH62_08140 PF02911 Formyl transferase, C-terminal domain LPH62_08140 PF00551 Formyl transferase LPH62_08145 PF01189 16S rRNA methyltransferase RsmB/F LPH62_08145 PF01029 NusB family LPH62_08150 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase LPH62_08165 PF07963 Prokaryotic N-terminal methylation motif LPH62_08165 PF00114 Pilin (bacterial filament) LPH62_08285 PF01367 5'-3' exonuclease, C-terminal SAM fold LPH62_08285 PF01612 3'-5' exonuclease LPH62_08285 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LPH62_08285 PF00476 DNA polymerase family A LPH62_08290 PF05173 Dihydrodipicolinate reductase, C-terminus LPH62_08290 PF01113 Dihydrodipicolinate reductase, N-terminus LPH62_08295 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LPH62_08295 PF00117 Glutamine amidotransferase class-I LPH62_08300 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LPH62_08300 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LPH62_08300 PF02142 MGS-like domain LPH62_08305 PF01272 Transcription elongation factor, GreA/GreB, C-term LPH62_08305 PF03449 Transcription elongation factor, N-terminal LPH62_08315 PF01368 DHH family LPH62_08315 PF17768 RecJ OB domain LPH62_08315 PF02272 DHHA1 domain LPH62_08325 PF01336 OB-fold nucleic acid binding domain LPH62_08325 PF00152 tRNA synthetases class II (D, K and N) LPH62_08330 PF00072 Response regulator receiver domain LPH62_08335 PF00512 His Kinase A (phospho-acceptor) domain LPH62_08335 PF00072 Response regulator receiver domain LPH62_08335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH62_08335 PF01627 Hpt domain LPH62_08340 PF00378 Enoyl-CoA hydratase/isomerase LPH62_08345 PF00696 Amino acid kinase family LPH62_08345 PF01842 ACT domain LPH62_08355 PF08245 Mur ligase middle domain LPH62_08375 PF00293 NUDIX domain LPH62_08385 PF02219 Methylenetetrahydrofolate reductase LPH62_08395 PF02545 Maf-like protein LPH62_08400 PF00575 S1 RNA binding domain LPH62_08400 PF10150 Ribonuclease E/G family LPH62_08410 PF01523 Putative modulator of DNA gyrase LPH62_08415 PF04751 Protein of unknown function (DUF615) LPH62_08420 PF01523 Putative modulator of DNA gyrase LPH62_08430 PF06250 YhcG PDDEXK nuclease domain LPH62_08430 PF17761 DUF1016 N-terminal domain LPH62_08450 PF03466 LysR substrate binding domain LPH62_08450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH62_08455 PF03358 NADPH-dependent FMN reductase LPH62_08465 PF00107 Zinc-binding dehydrogenase LPH62_08465 PF08240 Alcohol dehydrogenase GroES-like domain LPH62_08480 PF00248 Aldo/keto reductase family LPH62_08495 PF14602 Hexapeptide repeat of succinyl-transferase LPH62_08495 PF00132 Bacterial transferase hexapeptide (six repeats) LPH62_08495 PF12804 MobA-like NTP transferase domain LPH62_08505 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LPH62_08505 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LPH62_08510 PF02874 ATP synthase alpha/beta family, beta-barrel domain LPH62_08510 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LPH62_08515 PF00231 ATP synthase LPH62_08520 PF00306 ATP synthase alpha/beta chain, C terminal domain LPH62_08520 PF02874 ATP synthase alpha/beta family, beta-barrel domain LPH62_08520 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LPH62_08525 PF00213 ATP synthase delta (OSCP) subunit LPH62_08530 PF00430 ATP synthase B/B' CF(0) LPH62_08535 PF00137 ATP synthase subunit C LPH62_08540 PF00119 ATP synthase A chain LPH62_08550 PF00338 Ribosomal protein S10p/S20e LPH62_08555 PF00297 Ribosomal protein L3 LPH62_08560 PF00573 Ribosomal protein L4/L1 family LPH62_08565 PF00276 Ribosomal protein L23 LPH62_08570 PF03947 Ribosomal Proteins L2, C-terminal domain LPH62_08570 PF00181 Ribosomal Proteins L2, RNA binding domain LPH62_08575 PF00203 Ribosomal protein S19 LPH62_08580 PF00237 Ribosomal protein L22p/L17e LPH62_08585 PF07650 KH domain LPH62_08585 PF00189 Ribosomal protein S3, C-terminal domain LPH62_08590 PF00252 Ribosomal protein L16p/L10e LPH62_08595 PF00831 Ribosomal L29 protein LPH62_08600 PF00366 Ribosomal protein S17 LPH62_08605 PF00238 Ribosomal protein L14p/L23e LPH62_08610 PF00467 KOW motif LPH62_08610 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LPH62_08615 PF00281 Ribosomal protein L5 LPH62_08615 PF00673 ribosomal L5P family C-terminus LPH62_08620 PF00253 Ribosomal protein S14p/S29e LPH62_08625 PF00410 Ribosomal protein S8 LPH62_08630 PF00347 Ribosomal protein L6 LPH62_08635 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LPH62_08640 PF03719 Ribosomal protein S5, C-terminal domain LPH62_08640 PF00333 Ribosomal protein S5, N-terminal domain LPH62_08645 PF00327 Ribosomal protein L30p/L7e LPH62_08650 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LPH62_08655 PF00344 SecY translocase LPH62_08660 PF00416 Ribosomal protein S13/S18 LPH62_08665 PF00411 Ribosomal protein S11 LPH62_08670 PF01479 S4 domain LPH62_08670 PF00163 Ribosomal protein S4/S9 N-terminal domain LPH62_08675 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LPH62_08675 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LPH62_08675 PF01000 RNA polymerase Rpb3/RpoA insert domain LPH62_08680 PF01196 Ribosomal protein L17 LPH62_08685 PF04380 Membrane fusogenic activity LPH62_08690 PF13335 Magnesium chelatase, subunit ChlI C-terminal LPH62_08690 PF01078 Magnesium chelatase, subunit ChlI LPH62_08695 PF00561 alpha/beta hydrolase fold LPH62_08710 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LPH62_08710 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LPH62_08710 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LPH62_08725 PF05698 Bacterial trigger factor protein (TF) C-terminus LPH62_08725 PF05697 Bacterial trigger factor protein (TF) LPH62_08730 PF00574 Clp protease LPH62_08735 PF06689 ClpX C4-type zinc finger LPH62_08735 PF10431 C-terminal, D2-small domain, of ClpB protein LPH62_08735 PF07724 AAA domain (Cdc48 subfamily) LPH62_08740 PF05362 Lon protease (S16) C-terminal proteolytic domain LPH62_08740 PF02190 ATP-dependent protease La (LON) substrate-binding domain LPH62_08740 PF00004 ATPase family associated with various cellular activities (AAA) LPH62_08745 PF00216 Bacterial DNA-binding protein LPH62_08770 PF00317 Ribonucleotide reductase, all-alpha domain LPH62_08770 PF03477 ATP cone domain LPH62_08770 PF02867 Ribonucleotide reductase, barrel domain LPH62_08775 PF00268 Ribonucleotide reductase, small chain LPH62_08800 PF01479 S4 domain LPH62_08800 PF00849 RNA pseudouridylate synthase LPH62_08805 PF13419 Haloacid dehalogenase-like hydrolase LPH62_08815 PF00830 Ribosomal L28 family LPH62_08820 PF00471 Ribosomal protein L33 LPH62_08825 PF13396 Phospholipase_D-nuclease N-terminal LPH62_08825 PF13091 PLD-like domain LPH62_08840 PF07963 Prokaryotic N-terminal methylation motif LPH62_08840 PF00114 Pilin (bacterial filament) LPH62_08860 PF01612 3'-5' exonuclease LPH62_08860 PF01367 5'-3' exonuclease, C-terminal SAM fold LPH62_08860 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LPH62_08860 PF00476 DNA polymerase family A LPH62_08880 PF00959 Phage lysozyme LPH62_08900 PF01555 DNA methylase LPH62_08920 PF02798 Glutathione S-transferase, N-terminal domain LPH62_08920 PF00043 Glutathione S-transferase, C-terminal domain LPH62_08925 PF00056 lactate/malate dehydrogenase, NAD binding domain LPH62_08925 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LPH62_08930 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LPH62_08935 PF00679 Elongation factor G C-terminus LPH62_08935 PF03144 Elongation factor Tu domain 2 LPH62_08935 PF00009 Elongation factor Tu GTP binding domain LPH62_08950 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LPH62_08950 PF00529 HlyD membrane-fusion protein of T1SS LPH62_08975 PF00664 ABC transporter transmembrane region LPH62_08975 PF03412 Peptidase C39 family LPH62_08975 PF00005 ABC transporter LPH62_08980 PF01061 ABC-2 type transporter LPH62_08985 PF00005 ABC transporter LPH62_08990 PF05567 Neisseria PilC beta-propeller domain LPH62_09005 PF08482 ATP-dependent helicase C-terminal LPH62_09005 PF00271 Helicase conserved C-terminal domain LPH62_09005 PF04408 Helicase associated domain (HA2) LPH62_09005 PF00270 DEAD/DEAH box helicase LPH62_09015 PF13185 GAF domain LPH62_09020 PF17243 POTRA domain TamA domain 1 LPH62_09020 PF01103 Surface antigen LPH62_09025 PF04357 TamB, inner membrane protein subunit of TAM complex LPH62_09040 PF00285 Citrate synthase, C-terminal domain LPH62_09045 PF00330 Aconitase family (aconitate hydratase) LPH62_09045 PF00694 Aconitase C-terminal domain LPH62_09050 PF04303 PrpF protein LPH62_09070 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain LPH62_09070 PF00207 Alpha-2-macroglobulin family LPH62_09070 PF11974 Bacterial alpha-2-macroglobulin MG3 domain LPH62_09070 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain LPH62_09070 PF17962 Bacterial macroglobulin domain 6 LPH62_09070 PF01835 MG2 domain LPH62_09070 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain LPH62_09070 PF07703 Alpha-2-macroglobulin bait region domain LPH62_09075 PF02583 Metal-sensitive transcriptional repressor LPH62_09080 PF03824 High-affinity nickel-transport protein LPH62_09085 PF07859 alpha/beta hydrolase fold LPH62_09090 PF12833 Helix-turn-helix domain LPH62_09090 PF12852 Cupin LPH62_09105 PF01447 Thermolysin metallopeptidase, catalytic domain LPH62_09105 PF02868 Thermolysin metallopeptidase, alpha-helical domain LPH62_09105 PF16485 Protealysin propeptide LPH62_09110 PF00929 Exonuclease LPH62_09115 PF00924 Mechanosensitive ion channel LPH62_09115 PF05552 Conserved TM helix LPH62_09120 PF00391 PEP-utilising enzyme, mobile domain LPH62_09120 PF02896 PEP-utilising enzyme, TIM barrel domain LPH62_09120 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LPH62_09125 PF03618 Kinase/pyrophosphorylase LPH62_09145 PF04286 Protein of unknown function (DUF445) LPH62_09160 PF04359 Protein of unknown function (DUF493) LPH62_09165 PF03099 Biotin/lipoate A/B protein ligase family LPH62_09170 PF04055 Radical SAM superfamily LPH62_09170 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family LPH62_09200 PF03471 Transporter associated domain LPH62_09200 PF00571 CBS domain LPH62_09200 PF01595 Cyclin M transmembrane N-terminal domain LPH62_09215 PF01751 Toprim domain LPH62_09215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH62_09215 PF00986 DNA gyrase B subunit, carboxyl terminus LPH62_09215 PF00204 DNA gyrase B LPH62_09225 PF00117 Glutamine amidotransferase class-I LPH62_09225 PF06418 CTP synthase N-terminus LPH62_09230 PF00793 DAHP synthetase I family LPH62_09235 PF00113 Enolase, C-terminal TIM barrel domain LPH62_09235 PF03952 Enolase, N-terminal domain LPH62_09240 PF04977 Septum formation initiator LPH62_09245 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LPH62_09250 PF02542 YgbB family LPH62_09255 PF01713 Smr domain LPH62_09280 PF02470 MlaD protein LPH62_09280 PF03886 ABC-type transport auxiliary lipoprotein component LPH62_09285 PF00005 ABC transporter LPH62_09290 PF02405 Permease MlaE LPH62_09365 PF04093 rod shape-determining protein MreD LPH62_09370 PF03717 Penicillin-binding Protein dimerisation domain LPH62_09370 PF00905 Penicillin binding protein transpeptidase domain LPH62_09375 PF01098 Cell cycle protein LPH62_09380 PF02547 Queuosine biosynthesis protein LPH62_09385 PF02824 TGS domain LPH62_09385 PF04607 Region found in RelA / SpoT proteins LPH62_09385 PF13291 ACT domain LPH62_09400 PF03776 Septum formation topological specificity factor MinE LPH62_09405 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LPH62_09410 PF03775 Septum formation inhibitor MinC, C-terminal domain LPH62_09410 PF05209 Septum formation inhibitor MinC, N-terminal domain LPH62_09430 PF00730 HhH-GPD superfamily base excision DNA repair protein LPH62_09440 PF01292 Prokaryotic cytochrome b561 LPH62_09445 PF04264 YceI-like domain LPH62_09450 PF00072 Response regulator receiver domain LPH62_09450 PF09308 LuxQ, periplasmic LPH62_09450 PF00512 His Kinase A (phospho-acceptor) domain LPH62_09450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH62_09460 PF01208 Uroporphyrinogen decarboxylase (URO-D) LPH62_09465 PF01761 3-dehydroquinate synthase LPH62_09470 PF01202 Shikimate kinase LPH62_09475 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LPH62_09475 PF01243 Pyridoxamine 5'-phosphate oxidase LPH62_09485 PF00749 tRNA synthetases class I (E and Q), catalytic domain LPH62_09485 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain LPH62_09495 PF03932 CutC family LPH62_09515 PF00528 Binding-protein-dependent transport system inner membrane component LPH62_09520 PF00528 Binding-protein-dependent transport system inner membrane component LPH62_09525 PF12857 TOBE-like domain LPH62_09525 PF00005 ABC transporter LPH62_09565 PF01381 Helix-turn-helix LPH62_09640 PF10065 Uncharacterized conserved protein (DUF2303) LPH62_09665 PF04546 Sigma-70, non-essential region LPH62_09665 PF04545 Sigma-70, region 4 LPH62_09665 PF04539 Sigma-70 region 3 LPH62_09665 PF04542 Sigma-70 region 2 LPH62_09665 PF00140 Sigma-70 factor, region 1.2 LPH62_09665 PF03979 Sigma-70 factor, region 1.1 LPH62_09675 PF00521 DNA gyrase/topoisomerase IV, subunit A LPH62_09675 PF03989 DNA gyrase C-terminal domain, beta-propeller LPH62_09685 PF02321 Outer membrane efflux protein LPH62_09690 PF00529 HlyD membrane-fusion protein of T1SS LPH62_09690 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LPH62_09695 PF07690 Major Facilitator Superfamily LPH62_09700 PF12697 Alpha/beta hydrolase family LPH62_09705 PF00155 Aminotransferase class I and II LPH62_09715 PF01040 UbiA prenyltransferase family LPH62_09720 PF00753 Metallo-beta-lactamase superfamily LPH62_09725 PF12627 Probable RNA and SrmB- binding site of polymerase A LPH62_09725 PF01743 Poly A polymerase head domain LPH62_09725 PF01966 HD domain LPH62_09730 PF14718 Soluble lytic murein transglycosylase L domain LPH62_09730 PF01464 Transglycosylase SLT domain LPH62_09740 PF02666 Phosphatidylserine decarboxylase LPH62_09795 PF00456 Transketolase, thiamine diphosphate binding domain LPH62_09795 PF17831 Pyruvate dehydrogenase E1 component middle domain LPH62_09800 PF00698 Acyl transferase domain LPH62_09810 PF00550 Phosphopantetheine attachment site LPH62_09815 PF02801 Beta-ketoacyl synthase, C-terminal domain LPH62_09815 PF00109 Beta-ketoacyl synthase, N-terminal domain LPH62_09820 PF00425 chorismate binding enzyme LPH62_09820 PF04715 Anthranilate synthase component I, N terminal region LPH62_09825 PF02618 YceG-like family LPH62_09830 PF09115 DNA polymerase III, delta subunit, C terminal LPH62_09850 PF00459 Inositol monophosphatase family LPH62_09855 PF00588 SpoU rRNA Methylase family LPH62_09860 PF04055 Radical SAM superfamily LPH62_09865 PF09285 Elongation factor P, C-terminal LPH62_09865 PF08207 Elongation factor P (EF-P) KOW-like domain LPH62_09865 PF01132 Elongation factor P (EF-P) OB domain LPH62_09870 PF01979 Amidohydrolase family LPH62_09880 PF13419 Haloacid dehalogenase-like hydrolase LPH62_09895 PF00561 alpha/beta hydrolase fold LPH62_09900 PF08534 Redoxin LPH62_09930 PF00155 Aminotransferase class I and II LPH62_09935 PF00795 Carbon-nitrogen hydrolase LPH62_09945 PF00849 RNA pseudouridylate synthase LPH62_09945 PF01479 S4 domain LPH62_09950 PF04079 Segregation and condensation complex subunit ScpB LPH62_09955 PF02616 Segregation and condensation protein ScpA LPH62_09985 PF00528 Binding-protein-dependent transport system inner membrane component LPH62_09990 PF00528 Binding-protein-dependent transport system inner membrane component LPH62_10005 PF00795 Carbon-nitrogen hydrolase LPH62_10010 PF04371 Porphyromonas-type peptidyl-arginine deiminase LPH62_10020 PF00444 Ribosomal protein L36 LPH62_10025 PF02224 Cytidylate kinase LPH62_10030 PF00575 S1 RNA binding domain LPH62_10035 PF00216 Bacterial DNA-binding protein LPH62_10045 PF18073 Rubredoxin metal binding domain LPH62_10050 PF00953 Glycosyl transferase family 4 LPH62_10055 PF02719 Polysaccharide biosynthesis protein LPH62_10060 PF00483 Nucleotidyl transferase LPH62_10065 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LPH62_10065 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LPH62_10070 PF00571 CBS domain LPH62_10070 PF00478 IMP dehydrogenase / GMP reductase domain LPH62_10075 PF00117 Glutamine amidotransferase class-I LPH62_10075 PF00958 GMP synthase C terminal domain LPH62_10075 PF02540 NAD synthase LPH62_10125 PF09571 XcyI restriction endonuclease LPH62_10140 PF17755 UvrA DNA-binding domain LPH62_10140 PF17760 UvrA interaction domain LPH62_10140 PF00005 ABC transporter LPH62_10145 PF00829 Ribosomal prokaryotic L21 protein LPH62_10150 PF01016 Ribosomal L27 protein LPH62_10155 PF01926 50S ribosome-binding GTPase LPH62_10155 PF01018 GTP1/OBG LPH62_10160 PF01649 Ribosomal protein S20 LPH62_10165 PF03023 Lipid II flippase MurJ LPH62_10170 PF01687 Riboflavin kinase LPH62_10170 PF06574 FAD synthetase LPH62_10175 PF06827 Zinc finger found in FPG and IleRS LPH62_10175 PF08264 Anticodon-binding domain of tRNA LPH62_10175 PF00133 tRNA synthetases class I (I, L, M and V) LPH62_10180 PF01252 Signal peptidase (SPase) II LPH62_10185 PF02401 LytB protein LPH62_10255 PF13091 PLD-like domain LPH62_10255 PF13087 AAA domain LPH62_10260 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) LPH62_10260 PF06594 Haemolysin-type calcium binding protein related domain LPH62_10325 PF00664 ABC transporter transmembrane region LPH62_10325 PF00005 ABC transporter LPH62_10325 PF03412 Peptidase C39 family LPH62_10330 PF00155 Aminotransferase class I and II LPH62_10335 PF01522 Polysaccharide deacetylase LPH62_10340 PF00462 Glutaredoxin LPH62_10350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH62_10350 PF03466 LysR substrate binding domain LPH62_10360 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LPH62_10370 PF00857 Isochorismatase family LPH62_10380 PF00107 Zinc-binding dehydrogenase LPH62_10380 PF08240 Alcohol dehydrogenase GroES-like domain LPH62_10385 PF00107 Zinc-binding dehydrogenase LPH62_10385 PF08240 Alcohol dehydrogenase GroES-like domain LPH62_10405 PF00873 AcrB/AcrD/AcrF family LPH62_10410 PF00873 AcrB/AcrD/AcrF family LPH62_10415 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LPH62_10420 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term LPH62_10420 PF14489 QueF-like protein LPH62_10435 PF00330 Aconitase family (aconitate hydratase) LPH62_10440 PF00694 Aconitase C-terminal domain LPH62_10445 PF00180 Isocitrate/isopropylmalate dehydrogenase LPH62_10460 PF02397 Bacterial sugar transferase LPH62_10475 PF13439 Glycosyltransferase Family 4 LPH62_10475 PF00534 Glycosyl transferases group 1 LPH62_10485 PF01943 Polysaccharide biosynthesis protein LPH62_10500 PF00072 Response regulator receiver domain LPH62_10500 PF00486 Transcriptional regulatory protein, C terminal LPH62_10505 PF05958 tRNA (Uracil-5-)-methyltransferase LPH62_10510 PF01928 CYTH domain LPH62_10515 PF00933 Glycosyl hydrolase family 3 N terminal domain LPH62_10520 PF00156 Phosphoribosyl transferase domain LPH62_10525 PF01048 Phosphorylase superfamily LPH62_10530 PF00313 'Cold-shock' DNA-binding domain LPH62_10540 PF01668 SmpB protein LPH62_10550 PF03658 RnfH family Ubiquitin LPH62_10555 PF04355 SmpA / OmlA family LPH62_10560 PF01475 Ferric uptake regulator family LPH62_10565 PF02463 RecF/RecN/SMC N terminal domain LPH62_10570 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding LPH62_10570 PF01628 HrcA protein C terminal domain LPH62_10575 PF01025 GrpE LPH62_10580 PF00012 Hsp70 protein LPH62_10585 PF01556 DnaJ C terminal domain LPH62_10585 PF00684 DnaJ central domain LPH62_10585 PF00226 DnaJ domain LPH62_10595 PF00072 Response regulator receiver domain LPH62_10595 PF00486 Transcriptional regulatory protein, C terminal LPH62_10600 PF01219 Prokaryotic diacylglycerol kinase LPH62_10605 PF01790 Prolipoprotein diacylglyceryl transferase LPH62_10610 PF00303 Thymidylate synthase LPH62_10615 PF00186 Dihydrofolate reductase LPH62_10620 PF13700 Domain of unknown function (DUF4158) LPH62_10620 PF01526 Tn3 transposase DDE domain LPH62_10630 PF00072 Response regulator receiver domain LPH62_10630 PF00486 Transcriptional regulatory protein, C terminal LPH62_10635 PF13493 Domain of unknown function (DUF4118) LPH62_10635 PF13492 GAF domain LPH62_10635 PF00512 His Kinase A (phospho-acceptor) domain LPH62_10635 PF02702 Osmosensitive K+ channel His kinase sensor domain LPH62_10635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH62_10640 PF02669 K+-transporting ATPase, c chain LPH62_10650 PF03814 Potassium-transporting ATPase A subunit LPH62_10665 PF00149 Calcineurin-like phosphoesterase LPH62_10670 PF04379 ApaG domain LPH62_10675 PF00398 Ribosomal RNA adenine dimethylase LPH62_10680 PF00929 Exonuclease LPH62_10685 PF01895 PhoU domain LPH62_10690 PF00005 ABC transporter LPH62_10695 PF00528 Binding-protein-dependent transport system inner membrane component LPH62_10700 PF00528 Binding-protein-dependent transport system inner membrane component LPH62_10705 PF12849 PBP superfamily domain LPH62_10710 PF02254 TrkA-N domain LPH62_10710 PF00999 Sodium/hydrogen exchanger family LPH62_10715 PF07715 TonB-dependent Receptor Plug Domain LPH62_10715 PF00593 TonB dependent receptor LPH62_10720 PF01323 DSBA-like thioredoxin domain LPH62_10730 PF00005 ABC transporter LPH62_10730 PF12848 ABC transporter LPH62_10745 PF01066 CDP-alcohol phosphatidyltransferase LPH62_10750 PF08459 UvrC Helix-hairpin-helix N-terminal LPH62_10750 PF02151 UvrB/uvrC motif LPH62_10750 PF01541 GIY-YIG catalytic domain LPH62_10755 PF01451 Low molecular weight phosphotyrosine protein phosphatase LPH62_10760 PF02348 Cytidylyltransferase LPH62_10765 PF10609 NUBPL iron-transfer P-loop NTPase LPH62_10770 PF00202 Aminotransferase class-III LPH62_10780 PF00490 Delta-aminolevulinic acid dehydratase LPH62_10790 PF12146 Serine aminopeptidase, S33 LPH62_10805 PF01134 Glucose inhibited division protein A LPH62_10805 PF13932 GidA associated domain LPH62_10825 PF13649 Methyltransferase domain LPH62_10845 PF02649 Type I GTP cyclohydrolase folE2 LPH62_10850 PF00132 Bacterial transferase hexapeptide (six repeats) LPH62_10855 PF00873 AcrB/AcrD/AcrF family LPH62_10860 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LPH62_10860 PF00529 HlyD membrane-fusion protein of T1SS LPH62_10865 PF05088 Bacterial NAD-glutamate dehydrogenase LPH62_10870 PF01513 ATP-NAD kinase LPH62_10895 PF12706 Beta-lactamase superfamily domain LPH62_10905 PF00929 Exonuclease LPH62_10905 PF08411 Exonuclease C-terminal LPH62_10920 PF00999 Sodium/hydrogen exchanger family LPH62_10930 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LPH62_10940 PF01812 5-formyltetrahydrofolate cyclo-ligase family LPH62_10960 PF03695 Uncharacterised protein family (UPF0149) LPH62_10965 PF00557 Metallopeptidase family M24 LPH62_10965 PF05195 Aminopeptidase P, N-terminal domain LPH62_10970 PF00293 NUDIX domain LPH62_11005 PF01063 Amino-transferase class IV LPH62_11020 PF02954 Bacterial regulatory protein, Fis family LPH62_11030 PF01381 Helix-turn-helix LPH62_11045 PF00535 Glycosyl transferase family 2 LPH62_11055 PF00925 GTP cyclohydrolase II LPH62_11065 PF08534 Redoxin LPH62_11090 PF00959 Phage lysozyme LPH62_11110 PF01367 5'-3' exonuclease, C-terminal SAM fold LPH62_11110 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LPH62_11110 PF00476 DNA polymerase family A LPH62_11110 PF01612 3'-5' exonuclease LPH62_11135 PF07963 Prokaryotic N-terminal methylation motif LPH62_11135 PF00114 Pilin (bacterial filament) LPH62_11150 PF16123 Hydroxyacylglutathione hydrolase C-terminus LPH62_11150 PF00753 Metallo-beta-lactamase superfamily LPH62_11160 PF00075 RNase H LPH62_11165 PF00929 Exonuclease LPH62_11185 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LPH62_11195 PF13632 Glycosyl transferase family group 2 LPH62_11200 PF02230 Phospholipase/Carboxylesterase LPH62_11205 PF07694 5TMR of 5TMR-LYT LPH62_11205 PF06580 Histidine kinase LPH62_11210 PF04397 LytTr DNA-binding domain LPH62_11210 PF00072 Response regulator receiver domain LPH62_11215 PF03900 Porphobilinogen deaminase, C-terminal domain LPH62_11215 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LPH62_11230 PF00437 Type II/IV secretion system protein LPH62_11235 PF00437 Type II/IV secretion system protein LPH62_11250 PF00535 Glycosyl transferase family 2 LPH62_11260 PF02801 Beta-ketoacyl synthase, C-terminal domain LPH62_11260 PF00109 Beta-ketoacyl synthase, N-terminal domain LPH62_11275 PF09924 Uncharacterised conserved protein (DUF2156) LPH62_11275 PF03706 Lysylphosphatidylglycerol synthase TM region LPH62_11280 PF01042 Endoribonuclease L-PSP LPH62_11295 PF01430 Hsp33 protein LPH62_11300 PF00912 Transglycosylase LPH62_11305 PF05190 MutS family domain IV LPH62_11305 PF01624 MutS domain I LPH62_11305 PF05188 MutS domain II LPH62_11305 PF05192 MutS domain III LPH62_11305 PF00488 MutS domain V LPH62_11310 PF01168 Alanine racemase, N-terminal domain LPH62_11325 PF08279 HTH domain LPH62_11325 PF02237 Biotin protein ligase C terminal domain LPH62_11325 PF03099 Biotin/lipoate A/B protein ligase family LPH62_11330 PF03309 Type III pantothenate kinase LPH62_11360 PF01183 Glycosyl hydrolases family 25 LPH62_11380 PF01381 Helix-turn-helix LPH62_11390 PF07963 Prokaryotic N-terminal methylation motif LPH62_11390 PF00114 Pilin (bacterial filament) LPH62_11490 PF00589 Phage integrase family LPH62_11505 PF00959 Phage lysozyme LPH62_11520 PF00574 Clp protease LPH62_11560 PF01022 Bacterial regulatory protein, arsR family LPH62_11575 PF00873 AcrB/AcrD/AcrF family LPH62_11600 PF00581 Rhodanese-like domain LPH62_11605 PF02556 Preprotein translocase subunit SecB LPH62_11610 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LPH62_11610 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LPH62_11640 PF12169 DNA polymerase III subunits gamma and tau domain III LPH62_11640 PF12170 DNA polymerase III tau subunit V interacting with alpha LPH62_11645 PF02575 YbaB/EbfC DNA-binding family LPH62_11650 PF13662 Toprim domain LPH62_11650 PF02132 RecR protein LPH62_11655 PF01230 HIT domain LPH62_11665 PF11992 Domain of unknown function (DUF3488) LPH62_11665 PF13559 Domain of unknown function (DUF4129) LPH62_11665 PF01841 Transglutaminase-like superfamily LPH62_11675 PF07726 ATPase family associated with various cellular activities (AAA) LPH62_11675 PF17863 AAA lid domain LPH62_11685 PF02620 Large ribosomal RNA subunit accumulation protein YceD LPH62_11690 PF01783 Ribosomal L32p protein family LPH62_11695 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LPH62_11695 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LPH62_11710 PF01341 Glycosyl hydrolases family 6 LPH62_11710 PF00553 Cellulose binding domain LPH62_11710 PF00041 Fibronectin type III domain LPH62_11715 PF00682 HMGL-like LPH62_11715 PF08502 LeuA allosteric (dimerisation) domain LPH62_11720 PF00291 Pyridoxal-phosphate dependent enzyme LPH62_11730 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LPH62_11730 PF00205 Thiamine pyrophosphate enzyme, central domain LPH62_11730 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LPH62_11735 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LPH62_11735 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LPH62_11740 PF17804 Tail specific protease N-terminal domain LPH62_11740 PF03572 Peptidase family S41 LPH62_11740 PF11818 C-terminal domain of tail specific protease (DUF3340) LPH62_11740 PF00595 PDZ domain LPH62_11745 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family LPH62_11750 PF02566 OsmC-like protein LPH62_11755 PF03969 AFG1-like ATPase LPH62_11760 PF02129 X-Pro dipeptidyl-peptidase (S15 family) LPH62_11765 PF02492 CobW/HypB/UreG, nucleotide-binding domain LPH62_11765 PF07683 Cobalamin synthesis protein cobW C-terminal domain LPH62_11775 PF00551 Formyl transferase LPH62_11785 PF03109 ABC1 family LPH62_11795 PF12241 Trans-2-enoyl-CoA reductase catalytic region LPH62_11795 PF07055 Enoyl reductase FAD binding domain LPH62_11795 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase LPH62_11815 PF00881 Nitroreductase family LPH62_11820 PF04264 YceI-like domain LPH62_11825 PF02673 Bacitracin resistance protein BacA LPH62_11830 PF00120 Glutamine synthetase, catalytic domain LPH62_11830 PF03951 Glutamine synthetase, beta-Grasp domain LPH62_11835 PF00543 Nitrogen regulatory protein P-II LPH62_11840 PF00909 Ammonium Transporter Family LPH62_11855 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LPH62_11855 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LPH62_11860 PF02910 Fumarate reductase flavoprotein C-term LPH62_11860 PF00890 FAD binding domain LPH62_11865 PF02445 Quinolinate synthetase A protein LPH62_11870 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LPH62_11870 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LPH62_11875 PF01026 TatD related DNase