locus-tag class description LPH46_00065 PF01850 PIN domain LPH46_00075 PF00300 Histidine phosphatase superfamily (branch 1) LPH46_00080 PF10459 Peptidase S46 LPH46_00085 PF13667 ThiC-associated domain LPH46_00085 PF01964 Radical SAM ThiC family LPH46_00090 PF00970 Oxidoreductase FAD-binding domain LPH46_00090 PF00175 Oxidoreductase NAD-binding domain LPH46_00095 PF00255 Glutathione peroxidase LPH46_00100 PF00854 POT family LPH46_00105 PF04493 Endonuclease V LPH46_00110 PF00300 Histidine phosphatase superfamily (branch 1) LPH46_00115 PF04055 Radical SAM superfamily LPH46_00125 PF00691 OmpA family LPH46_00130 PF07676 WD40-like Beta Propeller Repeat LPH46_00130 PF04052 TolB amino-terminal domain LPH46_00140 PF02472 Biopolymer transport protein ExbD/TolR LPH46_00145 PF01618 MotA/TolQ/ExbB proton channel family LPH46_00150 PF03061 Thioesterase superfamily LPH46_00155 PF17864 RuvB AAA lid domain LPH46_00155 PF05491 RuvB C-terminal winged helix domain LPH46_00155 PF05496 Holliday junction DNA helicase RuvB P-loop domain LPH46_00160 PF02705 K+ potassium transporter LPH46_00165 PF07499 RuvA, C-terminal domain LPH46_00165 PF01330 RuvA N terminal domain LPH46_00170 PF02075 Crossover junction endodeoxyribonuclease RuvC LPH46_00175 PF01709 Transcriptional regulator LPH46_00185 PF04362 Bacterial Fe(2+) trafficking LPH46_00190 PF00633 Helix-hairpin-helix motif LPH46_00190 PF00730 HhH-GPD superfamily base excision DNA repair protein LPH46_00190 PF14815 NUDIX domain LPH46_00195 PF00448 SRP54-type protein, GTPase domain LPH46_00195 PF02881 SRP54-type protein, helical bundle domain LPH46_00220 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ LPH46_00225 PF04221 RelB antitoxin LPH46_00300 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system LPH46_00355 PF06508 Queuosine biosynthesis protein QueC LPH46_00360 PF00152 tRNA synthetases class II (D, K and N) LPH46_00360 PF01336 OB-fold nucleic acid binding domain LPH46_00360 PF02938 GAD domain LPH46_00380 PF05681 Fumarate hydratase (Fumerase) LPH46_00380 PF05683 Fumarase C-terminus LPH46_00395 PF01648 4'-phosphopantetheinyl transferase superfamily LPH46_00400 PF02527 rRNA small subunit methyltransferase G LPH46_00405 PF02779 Transketolase, pyrimidine binding domain LPH46_00405 PF02780 Transketolase, C-terminal domain LPH46_00405 PF00456 Transketolase, thiamine diphosphate binding domain LPH46_00410 PF00375 Sodium:dicarboxylate symporter family LPH46_00420 PF01625 Peptide methionine sulfoxide reductase LPH46_00435 PF01432 Peptidase family M3 LPH46_00440 PF06903 VirK protein LPH46_00445 PF02875 Mur ligase family, glutamate ligase domain LPH46_00445 PF08245 Mur ligase middle domain LPH46_00460 PF00156 Phosphoribosyl transferase domain LPH46_00470 PF01339 CheB methylesterase LPH46_00470 PF00072 Response regulator receiver domain LPH46_00475 PF01584 CheW-like domain LPH46_00475 PF02895 Signal transducing histidine kinase, homodimeric domain LPH46_00475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH46_00475 PF01627 Hpt domain LPH46_00475 PF00072 Response regulator receiver domain LPH46_00480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LPH46_00480 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LPH46_00485 PF01584 CheW-like domain LPH46_00490 PF00072 Response regulator receiver domain LPH46_00495 PF02951 Prokaryotic glutathione synthetase, N-terminal domain LPH46_00495 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain LPH46_00510 PF05746 DALR anticodon binding domain LPH46_00510 PF02092 Glycyl-tRNA synthetase beta subunit LPH46_00515 PF02091 Glycyl-tRNA synthetase alpha subunit LPH46_00520 PF00795 Carbon-nitrogen hydrolase LPH46_00520 PF02540 NAD synthase LPH46_00540 PF03692 Putative zinc- or iron-chelating domain LPH46_00550 PF00561 alpha/beta hydrolase fold LPH46_00560 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LPH46_00560 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LPH46_00570 PF00588 SpoU rRNA Methylase family LPH46_00580 PF02142 MGS-like domain LPH46_00580 PF01808 AICARFT/IMPCHase bienzyme LPH46_00585 PF02844 Phosphoribosylglycinamide synthetase, N domain LPH46_00585 PF02843 Phosphoribosylglycinamide synthetase, C domain LPH46_00585 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LPH46_00605 PF12805 FUSC-like inner membrane protein yccS LPH46_00615 PF03186 CobD/Cbib protein LPH46_00620 PF03895 YadA-like membrane anchor domain LPH46_00620 PF05658 Head domain of trimeric autotransporter adhesin LPH46_00620 PF05662 Coiled stalk of trimeric autotransporter adhesin LPH46_00625 PF01227 GTP cyclohydrolase I LPH46_00635 PF00132 Bacterial transferase hexapeptide (six repeats) LPH46_00640 PF00588 SpoU rRNA Methylase family LPH46_00640 PF08032 RNA 2'-O ribose methyltransferase substrate binding LPH46_00645 PF00575 S1 RNA binding domain LPH46_00645 PF00773 RNB domain LPH46_00645 PF08206 Ribonuclease B OB domain LPH46_00645 PF08461 Ribonuclease R winged-helix domain LPH46_00645 PF17876 Cold shock domain LPH46_00655 PF00959 Phage lysozyme LPH46_00725 PF02129 X-Pro dipeptidyl-peptidase (S15 family) LPH46_00730 PF07690 Major Facilitator Superfamily LPH46_00735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH46_00735 PF03466 LysR substrate binding domain LPH46_00750 PF01161 Phosphatidylethanolamine-binding protein LPH46_00755 PF00719 Inorganic pyrophosphatase LPH46_00760 PF00085 Thioredoxin LPH46_00770 PF13603 Leucyl-tRNA synthetase, Domain 2 LPH46_00770 PF00133 tRNA synthetases class I (I, L, M and V) LPH46_00770 PF08264 Anticodon-binding domain of tRNA LPH46_00785 PF01467 Cytidylyltransferase-like LPH46_00800 PF13406 Transglycosylase SLT domain LPH46_00805 PF03330 Lytic transglycolase LPH46_00805 PF05036 Sporulation related domain LPH46_00910 PF13332 Hemagglutinin repeat LPH46_00910 PF05860 haemagglutination activity domain LPH46_00910 PF15605 Bacterial toxin 28 LPH46_00910 PF04829 Pre-toxin domain with VENN motif LPH46_00940 PF13332 Hemagglutinin repeat LPH46_00940 PF04829 Pre-toxin domain with VENN motif LPH46_00940 PF05860 haemagglutination activity domain LPH46_00945 PF05860 haemagglutination activity domain LPH46_00945 PF13332 Hemagglutinin repeat LPH46_00945 PF13018 Extended Signal Peptide of Type V secretion system LPH46_00945 PF04829 Pre-toxin domain with VENN motif LPH46_01040 PF13332 Hemagglutinin repeat LPH46_01040 PF05860 haemagglutination activity domain LPH46_01040 PF15605 Bacterial toxin 28 LPH46_01040 PF04829 Pre-toxin domain with VENN motif LPH46_01040 PF15605 Bacterial toxin 28 LPH46_01040 PF05860 haemagglutination activity domain LPH46_01040 PF13332 Hemagglutinin repeat LPH46_01040 PF04829 Pre-toxin domain with VENN motif LPH46_01045 PF04829 Pre-toxin domain with VENN motif LPH46_01045 PF05860 haemagglutination activity domain LPH46_01045 PF13332 Hemagglutinin repeat LPH46_01045 PF13018 Extended Signal Peptide of Type V secretion system LPH46_01065 PF01810 LysE type translocator LPH46_01085 PF01132 Elongation factor P (EF-P) OB domain LPH46_01085 PF09285 Elongation factor P, C-terminal LPH46_01085 PF08207 Elongation factor P (EF-P) KOW-like domain LPH46_01090 PF01565 FAD binding domain LPH46_01090 PF02913 FAD linked oxidases, C-terminal domain LPH46_01095 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LPH46_01095 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LPH46_01095 PF01842 ACT domain LPH46_01100 PF13520 Amino acid permease LPH46_01105 PF13520 Amino acid permease LPH46_01110 PF00596 Class II Aldolase and Adducin N-terminal domain LPH46_01115 PF03079 ARD/ARD' family LPH46_01145 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LPH46_01145 PF01502 Phosphoribosyl-AMP cyclohydrolase LPH46_01150 PF00977 Histidine biosynthesis protein LPH46_01155 PF00977 Histidine biosynthesis protein LPH46_01160 PF00117 Glutamine amidotransferase class-I LPH46_01165 PF00475 Imidazoleglycerol-phosphate dehydratase LPH46_01170 PF00155 Aminotransferase class I and II LPH46_01175 PF00815 Histidinol dehydrogenase LPH46_01180 PF01634 ATP phosphoribosyltransferase LPH46_01180 PF08029 HisG, C-terminal domain LPH46_01195 PF03129 Anticodon binding domain LPH46_01195 PF13393 Histidyl-tRNA synthetase LPH46_01205 PF00291 Pyridoxal-phosphate dependent enzyme LPH46_01205 PF14821 Threonine synthase N terminus LPH46_01210 PF08544 GHMP kinases C terminal LPH46_01210 PF00288 GHMP kinases N terminal domain LPH46_01215 PF01842 ACT domain LPH46_01215 PF00742 Homoserine dehydrogenase LPH46_01215 PF03447 Homoserine dehydrogenase, NAD binding domain LPH46_01215 PF00696 Amino acid kinase family LPH46_01215 PF13840 ACT domain LPH46_01225 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LPH46_01225 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LPH46_01230 PF03652 Holliday junction resolvase LPH46_01235 PF02622 Uncharacterized ACR, COG1678 LPH46_01240 PF07943 Penicillin-binding protein 5, C-terminal domain LPH46_01240 PF00768 D-alanyl-D-alanine carboxypeptidase LPH46_01245 PF00141 Peroxidase LPH46_01250 PF00226 DnaJ domain LPH46_01250 PF01556 DnaJ C terminal domain LPH46_01260 PF06832 Penicillin-Binding Protein C-terminus Family LPH46_01260 PF00912 Transglycosylase LPH46_01260 PF00905 Penicillin binding protein transpeptidase domain LPH46_01265 PF07715 TonB-dependent Receptor Plug Domain LPH46_01265 PF00593 TonB dependent receptor LPH46_01285 PF08281 Sigma-70, region 4 LPH46_01285 PF04542 Sigma-70 region 2 LPH46_01295 PF13180 PDZ domain LPH46_01300 PF00679 Elongation factor G C-terminus LPH46_01300 PF03144 Elongation factor Tu domain 2 LPH46_01300 PF00009 Elongation factor Tu GTP binding domain LPH46_01300 PF06421 GTP-binding protein LepA C-terminus LPH46_01305 PF10502 Signal peptidase, peptidase S26 LPH46_01315 PF00035 Double-stranded RNA binding motif LPH46_01315 PF14622 Ribonuclease-III-like LPH46_01320 PF07650 KH domain LPH46_01320 PF01926 50S ribosome-binding GTPase LPH46_01325 PF02565 Recombination protein O C terminal LPH46_01325 PF11967 Recombination protein O N terminal LPH46_01330 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LPH46_01330 PF02779 Transketolase, pyrimidine binding domain LPH46_01330 PF02780 Transketolase, C-terminal domain LPH46_01340 PF00474 Sodium:solute symporter family LPH46_01350 PF16177 Acetyl-coenzyme A synthetase N-terminus LPH46_01350 PF13193 AMP-binding enzyme C-terminal domain LPH46_01350 PF00501 AMP-binding enzyme LPH46_01355 PF02659 Putative manganese efflux pump LPH46_01360 PF00106 short chain dehydrogenase LPH46_01375 PF13360 PQQ-like domain LPH46_01380 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region LPH46_01380 PF07676 WD40-like Beta Propeller Repeat LPH46_01380 PF00326 Prolyl oligopeptidase family LPH46_01385 PF03169 OPT oligopeptide transporter protein LPH46_01390 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LPH46_01390 PF01266 FAD dependent oxidoreductase LPH46_01395 PF00230 Major intrinsic protein LPH46_01400 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LPH46_01400 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LPH46_01415 PF08267 Cobalamin-independent synthase, N-terminal domain LPH46_01415 PF01717 Cobalamin-independent synthase, Catalytic domain LPH46_01420 PF02677 Epoxyqueuosine reductase QueH LPH46_01430 PF00501 AMP-binding enzyme LPH46_01440 PF00535 Glycosyl transferase family 2 LPH46_01445 PF01370 NAD dependent epimerase/dehydratase family LPH46_01450 PF17762 HTH domain found in ParB protein LPH46_01450 PF02195 ParB-like nuclease domain LPH46_01455 PF13614 AAA domain LPH46_01470 PF02403 Seryl-tRNA synthetase N-terminal domain LPH46_01470 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LPH46_01475 PF03544 Gram-negative bacterial TonB protein C-terminal LPH46_01480 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LPH46_01485 PF01842 ACT domain LPH46_01485 PF01817 Chorismate mutase type II LPH46_01485 PF00800 Prephenate dehydratase LPH46_01490 PF00266 Aminotransferase class-V LPH46_01500 PF12679 ABC-2 family transporter protein LPH46_01505 PF00005 ABC transporter LPH46_01535 PF00440 Bacterial regulatory proteins, tetR family LPH46_01540 PF01209 ubiE/COQ5 methyltransferase family LPH46_01550 PF00294 pfkB family carbohydrate kinase LPH46_01555 PF07690 Major Facilitator Superfamily LPH46_01565 PF04102 SlyX LPH46_01570 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LPH46_01570 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LPH46_01570 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LPH46_01575 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LPH46_01575 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LPH46_01580 PF00255 Glutathione peroxidase LPH46_01590 PF00005 ABC transporter LPH46_01605 PF00206 Lyase LPH46_01605 PF10415 Fumarase C C-terminus LPH46_01610 PF08328 Adenylosuccinate lyase C-terminal LPH46_01610 PF00206 Lyase LPH46_01615 PF08007 Cupin superfamily protein LPH46_01620 PF16078 2-oxoglutarate dehydrogenase N-terminus LPH46_01620 PF00676 Dehydrogenase E1 component LPH46_01620 PF16870 2-oxoglutarate dehydrogenase C-terminal LPH46_01620 PF02779 Transketolase, pyrimidine binding domain LPH46_01625 PF00364 Biotin-requiring enzyme LPH46_01625 PF02817 e3 binding domain LPH46_01625 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LPH46_01635 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LPH46_01635 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPH46_01645 PF00899 ThiF family LPH46_01660 PF00325 Bacterial regulatory proteins, crp family LPH46_01660 PF00027 Cyclic nucleotide-binding domain LPH46_01665 PF02675 S-adenosylmethionine decarboxylase LPH46_01670 PF03232 Ubiquinone biosynthesis protein COQ7 LPH46_01675 PF00572 Ribosomal protein L13 LPH46_01680 PF00380 Ribosomal protein S9/S16 LPH46_01685 PF00285 Citrate synthase, C-terminal domain LPH46_01690 PF01197 Ribosomal protein L31 LPH46_01695 PF00814 Glycoprotease family LPH46_01700 PF03466 LysR substrate binding domain LPH46_01700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH46_01705 PF13192 Thioredoxin domain LPH46_01705 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPH46_01710 PF00578 AhpC/TSA family LPH46_01710 PF10417 C-terminal domain of 1-Cys peroxiredoxin LPH46_01715 PF05658 Head domain of trimeric autotransporter adhesin LPH46_01715 PF03895 YadA-like membrane anchor domain LPH46_01715 PF13018 Extended Signal Peptide of Type V secretion system LPH46_01715 PF05662 Coiled stalk of trimeric autotransporter adhesin LPH46_01720 PF03958 Bacterial type II/III secretion system short domain LPH46_01720 PF00263 Bacterial type II and III secretion system protein LPH46_01730 PF10741 Type II secretion system (T2SS), protein M subtype b LPH46_01735 PF05137 Fimbrial assembly protein (PilN) LPH46_01740 PF03934 Type II secretion system (T2SS), protein K LPH46_01750 PF03934 Type II secretion system (T2SS), protein K LPH46_01760 PF07963 Prokaryotic N-terminal methylation motif LPH46_01765 PF12019 Type II transport protein GspH LPH46_01770 PF08334 Type II secretion system (T2SS), protein G LPH46_01775 PF00482 Type II secretion system (T2SS), protein F LPH46_01780 PF00437 Type II/IV secretion system protein LPH46_01780 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LPH46_01800 PF05175 Methyltransferase small domain LPH46_01800 PF17827 PrmC N-terminal domain LPH46_01810 PF00561 alpha/beta hydrolase fold LPH46_01825 PF06969 HemN C-terminal domain LPH46_01825 PF04055 Radical SAM superfamily LPH46_01830 PF01725 Ham1 family LPH46_01835 PF01138 3' exoribonuclease family, domain 1 LPH46_01835 PF03725 3' exoribonuclease family, domain 2 LPH46_01840 PF08340 Domain of unknown function (DUF1732) LPH46_01840 PF03755 YicC-like family, N-terminal region LPH46_01845 PF00625 Guanylate kinase LPH46_01850 PF01192 RNA polymerase Rpb6 LPH46_01855 PF00009 Elongation factor Tu GTP binding domain LPH46_01860 PF01507 Phosphoadenosine phosphosulfate reductase family LPH46_01865 PF00667 FAD binding domain LPH46_01865 PF00175 Oxidoreductase NAD-binding domain LPH46_01865 PF00258 Flavodoxin LPH46_01870 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LPH46_01870 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LPH46_01875 PF01507 Phosphoadenosine phosphosulfate reductase family LPH46_01900 PF13369 Transglutaminase-like superfamily LPH46_01935 PF11838 ERAP1-like C-terminal domain LPH46_01935 PF01433 Peptidase family M1 domain LPH46_01940 PF01209 ubiE/COQ5 methyltransferase family LPH46_01950 PF07724 AAA domain (Cdc48 subfamily) LPH46_01950 PF00004 ATPase family associated with various cellular activities (AAA) LPH46_01950 PF10431 C-terminal, D2-small domain, of ClpB protein LPH46_01955 PF00227 Proteasome subunit LPH46_01965 PF02899 Phage integrase, N-terminal SAM-like domain LPH46_01965 PF00589 Phage integrase family LPH46_01975 PF01678 Diaminopimelate epimerase LPH46_01985 PF00326 Prolyl oligopeptidase family LPH46_01985 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LPH46_01995 PF02082 Transcriptional regulator LPH46_02000 PF01458 Uncharacterized protein family (UPF0051) LPH46_02005 PF00005 ABC transporter LPH46_02010 PF01458 Uncharacterized protein family (UPF0051) LPH46_02015 PF00266 Aminotransferase class-V LPH46_02020 PF00355 Rieske [2Fe-2S] domain LPH46_02025 PF13439 Glycosyltransferase Family 4 LPH46_02025 PF00534 Glycosyl transferases group 1 LPH46_02030 PF01522 Polysaccharide deacetylase LPH46_02035 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LPH46_02035 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LPH46_02035 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LPH46_02035 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LPH46_02040 PF17848 Acetyl-coA carboxylase zinc finger domain LPH46_02040 PF01039 Carboxyl transferase domain LPH46_02060 PF01979 Amidohydrolase family LPH46_02065 PF01380 SIS domain LPH46_02075 PF07690 Major Facilitator Superfamily LPH46_02085 PF02685 Glucokinase LPH46_02110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH46_02110 PF00512 His Kinase A (phospho-acceptor) domain LPH46_02125 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LPH46_02130 PF00004 ATPase family associated with various cellular activities (AAA) LPH46_02130 PF16193 AAA C-terminal domain LPH46_02130 PF12002 MgsA AAA+ ATPase C terminal LPH46_02135 PF03548 Outer membrane lipoprotein carrier protein LolA LPH46_02150 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LPH46_02150 PF17854 FtsK alpha domain LPH46_02150 PF01580 FtsK/SpoIIIE family LPH46_02150 PF09397 Ftsk gamma domain LPH46_02155 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPH46_02165 PF03588 Leucyl/phenylalanyl-tRNA protein transferase LPH46_02170 PF01176 Translation initiation factor 1A / IF-1 LPH46_02175 PF02861 Clp amino terminal domain, pathogenicity island component LPH46_02175 PF10431 C-terminal, D2-small domain, of ClpB protein LPH46_02175 PF07724 AAA domain (Cdc48 subfamily) LPH46_02175 PF00004 ATPase family associated with various cellular activities (AAA) LPH46_02175 PF17871 AAA lid domain LPH46_02180 PF02617 ATP-dependent Clp protease adaptor protein ClpS LPH46_02185 PF00293 NUDIX domain LPH46_02195 PF04356 Protein of unknown function (DUF489) LPH46_02210 PF01323 DSBA-like thioredoxin domain LPH46_02220 PF01926 50S ribosome-binding GTPase LPH46_02225 PF04107 Glutamate-cysteine ligase family 2(GCS2) LPH46_02235 PF00202 Aminotransferase class-III LPH46_02240 PF00027 Cyclic nucleotide-binding domain LPH46_02240 PF00520 Ion transport protein LPH46_02245 PF00589 Phage integrase family LPH46_02245 PF02899 Phage integrase, N-terminal SAM-like domain LPH46_02250 PF13098 Thioredoxin-like domain LPH46_02250 PF10411 Disulfide bond isomerase protein N-terminus LPH46_02255 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal LPH46_02255 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LPH46_02255 PF02769 AIR synthase related protein, C-terminal domain LPH46_02265 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LPH46_02275 PF01380 SIS domain LPH46_02275 PF00571 CBS domain LPH46_02295 PF12399 Branched-chain amino acid ATP-binding cassette transporter LPH46_02295 PF00005 ABC transporter LPH46_02300 PF04552 Sigma-54, DNA binding domain LPH46_02300 PF00309 Sigma-54 factor, Activator interacting domain (AID) LPH46_02300 PF04963 Sigma-54 factor, core binding domain LPH46_02305 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LPH46_02310 PF02603 HPr Serine kinase N terminus LPH46_02310 PF07475 HPr Serine kinase C-terminal domain LPH46_02315 PF03668 P-loop ATPase protein family LPH46_02325 PF00381 PTS HPr component phosphorylation site LPH46_02330 PF02896 PEP-utilising enzyme, TIM barrel domain LPH46_02330 PF05524 PEP-utilising enzyme, N-terminal LPH46_02330 PF00391 PEP-utilising enzyme, mobile domain LPH46_02335 PF03448 MgtE intracellular N domain LPH46_02335 PF01769 Divalent cation transporter LPH46_02335 PF00571 CBS domain LPH46_02340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LPH46_02375 PF08281 Sigma-70, region 4 LPH46_02375 PF04542 Sigma-70 region 2 LPH46_02385 PF00082 Subtilase family LPH46_02390 PF00436 Single-strand binding protein family LPH46_02395 PF00348 Polyprenyl synthetase LPH46_02400 PF06481 COX Aromatic Rich Motif LPH46_02400 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LPH46_02405 PF00115 Cytochrome C and Quinol oxidase polypeptide I LPH46_02410 PF00510 Cytochrome c oxidase subunit III LPH46_02415 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LPH46_02420 PF02347 Glycine cleavage system P-protein LPH46_02430 PF00270 DEAD/DEAH box helicase LPH46_02430 PF11898 Domain of unknown function (DUF3418) LPH46_02430 PF04408 Helicase associated domain (HA2) LPH46_02430 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LPH46_02430 PF00271 Helicase conserved C-terminal domain LPH46_02435 PF00210 Ferritin-like domain LPH46_02440 PF00270 DEAD/DEAH box helicase LPH46_02440 PF00271 Helicase conserved C-terminal domain LPH46_02440 PF00570 HRDC domain LPH46_02440 PF16124 RecQ zinc-binding LPH46_02440 PF09382 RQC domain LPH46_02460 PF00296 Luciferase-like monooxygenase LPH46_02465 PF18073 Rubredoxin metal binding domain LPH46_02475 PF00290 Tryptophan synthase alpha chain LPH46_02480 PF00291 Pyridoxal-phosphate dependent enzyme LPH46_02485 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LPH46_02490 PF01416 tRNA pseudouridine synthase LPH46_02500 PF01118 Semialdehyde dehydrogenase, NAD binding domain LPH46_02500 PF02774 Semialdehyde dehydrogenase, dimerisation domain LPH46_02510 PF01264 Chorismate synthase LPH46_02515 PF05175 Methyltransferase small domain LPH46_02530 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) LPH46_02530 PF06594 Haemolysin-type calcium binding protein related domain LPH46_02585 PF00348 Polyprenyl synthetase LPH46_02590 PF02609 Exonuclease VII small subunit LPH46_02595 PF01171 PP-loop family LPH46_02595 PF09179 TilS substrate binding domain LPH46_02595 PF11734 TilS substrate C-terminal domain LPH46_02605 PF00375 Sodium:dicarboxylate symporter family LPH46_02610 PF00877 NlpC/P60 family LPH46_02615 PF00877 NlpC/P60 family LPH46_02620 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LPH46_02625 PF04235 Protein of unknown function (DUF418) LPH46_02650 PF10576 Iron-sulfur binding domain of endonuclease III LPH46_02650 PF00730 HhH-GPD superfamily base excision DNA repair protein LPH46_02650 PF00633 Helix-hairpin-helix motif LPH46_02665 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LPH46_02665 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LPH46_02670 PF00293 NUDIX domain LPH46_02695 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LPH46_02695 PF01488 Shikimate / quinate 5-dehydrogenase LPH46_02695 PF08501 Shikimate dehydrogenase substrate binding domain LPH46_02700 PF02581 Thiamine monophosphate synthase LPH46_02700 PF08543 Phosphomethylpyrimidine kinase LPH46_02720 PF02683 Cytochrome C biogenesis protein transmembrane region LPH46_02720 PF11412 Disulphide bond corrector protein DsbC LPH46_02725 PF03091 CutA1 divalent ion tolerance protein LPH46_02730 PF00166 Chaperonin 10 Kd subunit LPH46_02735 PF00118 TCP-1/cpn60 chaperonin family LPH46_02760 PF01370 NAD dependent epimerase/dehydratase family LPH46_02765 PF01370 NAD dependent epimerase/dehydratase family LPH46_02770 PF16363 GDP-mannose 4,6 dehydratase LPH46_02785 PF00291 Pyridoxal-phosphate dependent enzyme LPH46_02805 PF00593 TonB dependent receptor LPH46_02805 PF07715 TonB-dependent Receptor Plug Domain LPH46_02810 PF18331 PKHD-type hydroxylase C-terminal domain LPH46_02810 PF13640 2OG-Fe(II) oxygenase superfamily LPH46_02830 PF02424 ApbE family LPH46_02835 PF00175 Oxidoreductase NAD-binding domain LPH46_02835 PF00258 Flavodoxin LPH46_02835 PF00667 FAD binding domain LPH46_02845 PF01636 Phosphotransferase enzyme family LPH46_02850 PF00483 Nucleotidyl transferase LPH46_02855 PF00308 Bacterial dnaA protein LPH46_02860 PF01594 AI-2E family transporter LPH46_02870 PF02769 AIR synthase related protein, C-terminal domain LPH46_02870 PF00586 AIR synthase related protein, N-terminal domain LPH46_02875 PF00551 Formyl transferase LPH46_02890 PF02223 Thymidylate kinase LPH46_02895 PF05649 Peptidase family M13 LPH46_02895 PF01431 Peptidase family M13 LPH46_02900 PF07977 FabA-like domain LPH46_02905 PF01171 PP-loop family LPH46_02910 PF04381 Putative exonuclease, RdgC LPH46_02920 PF00762 Ferrochelatase LPH46_02930 PF02416 mttA/Hcf106 family LPH46_02935 PF02416 mttA/Hcf106 family LPH46_02940 PF00902 Sec-independent protein translocase protein (TatC) LPH46_02950 PF00117 Glutamine amidotransferase class-I LPH46_02950 PF00958 GMP synthase C terminal domain LPH46_02950 PF02540 NAD synthase LPH46_02955 PF00127 Copper binding proteins, plastocyanin/azurin family LPH46_02960 PF03193 RsgA GTPase LPH46_02965 PF02021 Uncharacterised protein family UPF0102 LPH46_02970 PF04348 LppC putative lipoprotein LPH46_02975 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LPH46_02980 PF07715 TonB-dependent Receptor Plug Domain LPH46_02980 PF00593 TonB dependent receptor LPH46_02985 PF09334 tRNA synthetases class I (M) LPH46_02985 PF01588 Putative tRNA binding domain LPH46_02995 PF04060 Putative Fe-S cluster LPH46_03040 PF07687 Peptidase dimerisation domain LPH46_03040 PF01546 Peptidase family M20/M25/M40 LPH46_03065 PF05567 Neisseria PilC beta-propeller domain LPH46_03090 PF11892 Domain of unknown function (DUF3412) LPH46_03090 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases LPH46_03090 PF03641 Possible lysine decarboxylase LPH46_03095 PF00563 EAL domain LPH46_03095 PF12792 CSS motif domain associated with EAL LPH46_03105 PF00899 ThiF family LPH46_03110 PF01926 50S ribosome-binding GTPase LPH46_03110 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LPH46_03115 PF13360 PQQ-like domain LPH46_03115 PF01011 PQQ enzyme repeat LPH46_03135 PF04055 Radical SAM superfamily LPH46_03140 PF00334 Nucleoside diphosphate kinase LPH46_03145 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LPH46_03145 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LPH46_03150 PF00709 Adenylosuccinate synthetase LPH46_03160 PF01145 SPFH domain / Band 7 family LPH46_03165 PF01145 SPFH domain / Band 7 family LPH46_03165 PF12221 Bacterial membrane protein N terminal LPH46_03170 PF08240 Alcohol dehydrogenase GroES-like domain LPH46_03170 PF00107 Zinc-binding dehydrogenase LPH46_03175 PF00072 Response regulator receiver domain LPH46_03190 PF03129 Anticodon binding domain LPH46_03190 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LPH46_03190 PF04073 Aminoacyl-tRNA editing domain LPH46_03200 PF01066 CDP-alcohol phosphatidyltransferase LPH46_03210 PF00583 Acetyltransferase (GNAT) family LPH46_03225 PF14310 Fibronectin type III-like domain LPH46_03225 PF00933 Glycosyl hydrolase family 3 N terminal domain LPH46_03225 PF01915 Glycosyl hydrolase family 3 C-terminal domain LPH46_03230 PF00924 Mechanosensitive ion channel LPH46_03235 PF02152 Dihydroneopterin aldolase LPH46_03240 PF00814 Glycoprotease family LPH46_03245 PF01165 Ribosomal protein S21 LPH46_03250 PF09424 Yqey-like protein LPH46_03255 PF03631 Virulence factor BrkB LPH46_03260 PF08278 DNA primase DnaG DnaB-binding LPH46_03260 PF08275 DNA primase catalytic core, N-terminal domain LPH46_03260 PF01807 CHC2 zinc finger LPH46_03260 PF10410 DnaB-helicase binding domain of primase LPH46_03270 PF00579 tRNA synthetases class I (W and Y) LPH46_03275 PF13538 UvrD-like helicase C-terminal domain LPH46_03280 PF13361 UvrD-like helicase C-terminal domain LPH46_03280 PF00580 UvrD/REP helicase N-terminal domain LPH46_03280 PF12705 PD-(D/E)XK nuclease superfamily LPH46_03285 PF17946 RecC C-terminal domain LPH46_03290 PF00005 ABC transporter LPH46_03295 PF02405 Permease MlaE LPH46_03300 PF02470 MlaD protein LPH46_03305 PF05494 MlaC protein LPH46_03315 PF04333 MlaA lipoprotein LPH46_03320 PF02646 RmuC family LPH46_03325 PF00005 ABC transporter LPH46_03340 PF13520 Amino acid permease LPH46_03350 PF17785 PUA-like domain LPH46_03350 PF10672 S-adenosylmethionine-dependent methyltransferase LPH46_03355 PF03741 Integral membrane protein TerC family LPH46_03375 PF01521 Iron-sulphur cluster biosynthesis LPH46_03390 PF00072 Response regulator receiver domain LPH46_03390 PF00486 Transcriptional regulatory protein, C terminal LPH46_03395 PF00072 Response regulator receiver domain LPH46_03395 PF01627 Hpt domain LPH46_03395 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LPH46_03395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH46_03395 PF00672 HAMP domain LPH46_03395 PF00512 His Kinase A (phospho-acceptor) domain LPH46_03400 PF00672 HAMP domain LPH46_03400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH46_03400 PF00512 His Kinase A (phospho-acceptor) domain LPH46_03400 PF01627 Hpt domain LPH46_03400 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LPH46_03400 PF00072 Response regulator receiver domain LPH46_03405 PF00210 Ferritin-like domain LPH46_03430 PF02773 S-adenosylmethionine synthetase, C-terminal domain LPH46_03430 PF02772 S-adenosylmethionine synthetase, central domain LPH46_03430 PF00438 S-adenosylmethionine synthetase, N-terminal domain LPH46_03440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH46_03445 PF00486 Transcriptional regulatory protein, C terminal LPH46_03445 PF00072 Response regulator receiver domain LPH46_03455 PF01207 Dihydrouridine synthase (Dus) LPH46_03460 PF00593 TonB dependent receptor LPH46_03460 PF07715 TonB-dependent Receptor Plug Domain LPH46_03475 PF00004 ATPase family associated with various cellular activities (AAA) LPH46_03475 PF17871 AAA lid domain LPH46_03475 PF07724 AAA domain (Cdc48 subfamily) LPH46_03475 PF02861 Clp amino terminal domain, pathogenicity island component LPH46_03475 PF10431 C-terminal, D2-small domain, of ClpB protein LPH46_03485 PF00301 Rubredoxin LPH46_03490 PF02581 Thiamine monophosphate synthase LPH46_03505 PF00067 Cytochrome P450 LPH46_03535 PF03796 DnaB-like helicase C terminal domain LPH46_03535 PF00772 DnaB-like helicase N terminal domain LPH46_03540 PF00691 OmpA family LPH46_03540 PF05736 OprF membrane domain LPH46_03550 PF00248 Aldo/keto reductase family LPH46_03555 PF00912 Transglycosylase LPH46_03555 PF17092 Penicillin-binding protein OB-like domain LPH46_03555 PF00905 Penicillin binding protein transpeptidase domain LPH46_03560 PF11104 Type IV pilus assembly protein PilM; LPH46_03565 PF05137 Fimbrial assembly protein (PilN) LPH46_03570 PF04350 Pilus assembly protein, PilO LPH46_03575 PF04351 Pilus assembly protein, PilP LPH46_03580 PF11741 AMIN domain LPH46_03580 PF00263 Bacterial type II and III secretion system protein LPH46_03580 PF03958 Bacterial type II/III secretion system short domain LPH46_03580 PF07660 Secretin and TonB N terminus short domain LPH46_03590 PF00884 Sulfatase LPH46_03590 PF08019 Phosphoethanolamine transferase EptA/EptB LPH46_03595 PF00067 Cytochrome P450 LPH46_03600 PF00270 DEAD/DEAH box helicase LPH46_03600 PF00271 Helicase conserved C-terminal domain LPH46_03600 PF17191 RecG wedge domain LPH46_03605 PF01042 Endoribonuclease L-PSP LPH46_03610 PF13291 ACT domain LPH46_03610 PF04607 Region found in RelA / SpoT proteins LPH46_03610 PF02824 TGS domain LPH46_03620 PF01565 FAD binding domain LPH46_03620 PF02913 FAD linked oxidases, C-terminal domain LPH46_03625 PF05736 OprF membrane domain LPH46_03625 PF00691 OmpA family LPH46_03630 PF02600 Disulfide bond formation protein DsbB LPH46_03635 PF07715 TonB-dependent Receptor Plug Domain LPH46_03635 PF00593 TonB dependent receptor LPH46_03640 PF02590 Predicted SPOUT methyltransferase LPH46_03655 PF04851 Type III restriction enzyme, res subunit LPH46_03655 PF02151 UvrB/uvrC motif LPH46_03655 PF12344 Ultra-violet resistance protein B LPH46_03655 PF17757 UvrB interaction domain LPH46_03655 PF00271 Helicase conserved C-terminal domain LPH46_03670 PF00701 Dihydrodipicolinate synthetase family LPH46_03680 PF00578 AhpC/TSA family LPH46_03685 PF13638 PIN domain LPH46_03685 PF02562 PhoH-like protein LPH46_03705 PF02769 AIR synthase related protein, C-terminal domain LPH46_03705 PF00586 AIR synthase related protein, N-terminal domain LPH46_03710 PF01029 NusB family LPH46_03715 PF00885 6,7-dimethyl-8-ribityllumazine synthase LPH46_03720 PF00925 GTP cyclohydrolase II LPH46_03720 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LPH46_03725 PF00677 Lumazine binding domain LPH46_03730 PF01872 RibD C-terminal domain LPH46_03730 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LPH46_03740 PF03477 ATP cone domain LPH46_03750 PF00464 Serine hydroxymethyltransferase LPH46_03755 PF00005 ABC transporter LPH46_03755 PF12848 ABC transporter LPH46_03760 PF06039 Malate:quinone oxidoreductase (Mqo) LPH46_03765 PF04134 Protein of unknown function, DUF393 LPH46_03770 PF02578 Multi-copper polyphenol oxidoreductase laccase LPH46_03775 PF01479 S4 domain LPH46_03775 PF00849 RNA pseudouridylate synthase LPH46_03780 PF13525 Outer membrane lipoprotein LPH46_03790 PF02421 Ferrous iron transport protein B LPH46_03790 PF07664 Ferrous iron transport protein B C terminus LPH46_03790 PF07670 Nucleoside recognition LPH46_03805 PF04386 Stringent starvation protein B LPH46_03810 PF00043 Glutathione S-transferase, C-terminal domain LPH46_03810 PF02798 Glutathione S-transferase, N-terminal domain LPH46_03830 PF01464 Transglycosylase SLT domain LPH46_03835 PF04055 Radical SAM superfamily LPH46_03835 PF01938 TRAM domain LPH46_03835 PF00919 Uncharacterized protein family UPF0004 LPH46_03840 PF02562 PhoH-like protein LPH46_03845 PF02130 Uncharacterized protein family UPF0054 LPH46_03855 PF00571 CBS domain LPH46_03855 PF03471 Transporter associated domain LPH46_03885 PF04829 Pre-toxin domain with VENN motif LPH46_03885 PF05860 haemagglutination activity domain LPH46_03885 PF13332 Hemagglutinin repeat LPH46_03890 PF05860 haemagglutination activity domain LPH46_03890 PF13332 Hemagglutinin repeat LPH46_03890 PF13018 Extended Signal Peptide of Type V secretion system LPH46_03890 PF04829 Pre-toxin domain with VENN motif LPH46_03895 PF08479 POTRA domain, ShlB-type LPH46_03895 PF17287 POTRA domain LPH46_03895 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB LPH46_03905 PF00521 DNA gyrase/topoisomerase IV, subunit A LPH46_03905 PF03989 DNA gyrase C-terminal domain, beta-propeller LPH46_03910 PF01008 Initiation factor 2 subunit family LPH46_03920 PF00152 tRNA synthetases class II (D, K and N) LPH46_03925 PF00583 Acetyltransferase (GNAT) family LPH46_03930 PF03120 NAD-dependent DNA ligase OB-fold domain LPH46_03930 PF01653 NAD-dependent DNA ligase adenylation domain LPH46_03930 PF00533 BRCA1 C Terminus (BRCT) domain LPH46_03930 PF12826 Helix-hairpin-helix motif LPH46_03930 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LPH46_03940 PF04354 ZipA, C-terminal FtsZ-binding domain LPH46_03945 PF02463 RecF/RecN/SMC N terminal domain LPH46_03950 PF01281 Ribosomal protein L9, N-terminal domain LPH46_03950 PF03948 Ribosomal protein L9, C-terminal domain LPH46_03955 PF01084 Ribosomal protein S18 LPH46_03960 PF01250 Ribosomal protein S6 LPH46_03965 PF01521 Iron-sulphur cluster biosynthesis LPH46_03970 PF01336 OB-fold nucleic acid binding domain LPH46_03970 PF00152 tRNA synthetases class II (D, K and N) LPH46_03975 PF01061 ABC-2 type transporter LPH46_03980 PF00005 ABC transporter LPH46_03990 PF01180 Dihydroorotate dehydrogenase LPH46_03995 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LPH46_03995 PF01565 FAD binding domain LPH46_04000 PF00892 EamA-like transporter family LPH46_04005 PF01569 PAP2 superfamily LPH46_04010 PF04551 GcpE protein LPH46_04020 PF00072 Response regulator receiver domain LPH46_04025 PF00889 Elongation factor TS LPH46_04030 PF00318 Ribosomal protein S2 LPH46_04045 PF00005 ABC transporter LPH46_04045 PF00664 ABC transporter transmembrane region LPH46_04065 PF02321 Outer membrane efflux protein LPH46_04070 PF12850 Calcineurin-like phosphoesterase superfamily domain LPH46_04075 PF02541 Ppx/GppA phosphatase family LPH46_04080 PF02503 Polyphosphate kinase middle domain LPH46_04080 PF13090 Polyphosphate kinase C-terminal domain 2 LPH46_04080 PF17941 Polyphosphate kinase C-terminal domain 1 LPH46_04080 PF13089 Polyphosphate kinase N-terminal domain LPH46_04085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH46_04085 PF00512 His Kinase A (phospho-acceptor) domain LPH46_04085 PF11808 Phosphate regulon sensor protein PhoR LPH46_04085 PF00989 PAS fold LPH46_04090 PF00486 Transcriptional regulatory protein, C terminal LPH46_04090 PF00072 Response regulator receiver domain LPH46_04095 PF01435 Peptidase family M48 LPH46_04095 PF13181 Tetratricopeptide repeat LPH46_04100 PF00462 Glutaredoxin LPH46_04105 PF00180 Isocitrate/isopropylmalate dehydrogenase LPH46_04115 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LPH46_04115 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LPH46_04125 PF00037 4Fe-4S binding domain LPH46_04125 PF11953 Domain of unknown function (DUF3470) LPH46_04135 PF01106 NifU-like domain LPH46_04140 PF01329 Pterin 4 alpha carbinolamine dehydratase LPH46_04155 PF01479 S4 domain LPH46_04155 PF00849 RNA pseudouridylate synthase LPH46_04160 PF12111 Polyribonucleotide phosphorylase C terminal LPH46_04160 PF00575 S1 RNA binding domain LPH46_04160 PF10150 Ribonuclease E/G family LPH46_04165 PF00196 Bacterial regulatory proteins, luxR family LPH46_04165 PF00072 Response regulator receiver domain LPH46_04170 PF17773 UPF0176 acylphosphatase like domain LPH46_04180 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LPH46_04180 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LPH46_04185 PF00545 ribonuclease LPH46_04195 PF00005 ABC transporter LPH46_04195 PF16326 ABC transporter C-terminal domain LPH46_04195 PF12848 ABC transporter LPH46_04200 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LPH46_04205 PF00313 'Cold-shock' DNA-binding domain LPH46_04215 PF01435 Peptidase family M48 LPH46_04220 PF00009 Elongation factor Tu GTP binding domain LPH46_04220 PF03143 Elongation factor Tu C-terminal domain LPH46_04220 PF03144 Elongation factor Tu domain 2 LPH46_04225 PF00679 Elongation factor G C-terminus LPH46_04225 PF14492 Elongation Factor G, domain II LPH46_04225 PF03764 Elongation factor G, domain IV LPH46_04225 PF00009 Elongation factor Tu GTP binding domain LPH46_04225 PF03144 Elongation factor Tu domain 2 LPH46_04230 PF00177 Ribosomal protein S7p/S5e LPH46_04235 PF00164 Ribosomal protein S12/S23 LPH46_04240 PF04998 RNA polymerase Rpb1, domain 5 LPH46_04240 PF05000 RNA polymerase Rpb1, domain 4 LPH46_04240 PF04983 RNA polymerase Rpb1, domain 3 LPH46_04240 PF00623 RNA polymerase Rpb1, domain 2 LPH46_04240 PF04997 RNA polymerase Rpb1, domain 1 LPH46_04245 PF04560 RNA polymerase Rpb2, domain 7 LPH46_04245 PF00562 RNA polymerase Rpb2, domain 6 LPH46_04245 PF10385 RNA polymerase beta subunit external 1 domain LPH46_04245 PF04561 RNA polymerase Rpb2, domain 2 LPH46_04245 PF04563 RNA polymerase beta subunit LPH46_04245 PF04565 RNA polymerase Rpb2, domain 3 LPH46_04250 PF16320 Ribosomal protein L7/L12 dimerisation domain LPH46_04250 PF00542 Ribosomal protein L7/L12 C-terminal domain LPH46_04255 PF00466 Ribosomal protein L10 LPH46_04260 PF00687 Ribosomal protein L1p/L10e family LPH46_04265 PF03946 Ribosomal protein L11, N-terminal domain LPH46_04265 PF00298 Ribosomal protein L11, RNA binding domain LPH46_04270 PF00467 KOW motif LPH46_04270 PF02357 Transcription termination factor nusG LPH46_04275 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LPH46_04285 PF03144 Elongation factor Tu domain 2 LPH46_04285 PF00009 Elongation factor Tu GTP binding domain LPH46_04285 PF03143 Elongation factor Tu C-terminal domain LPH46_04305 PF06071 Protein of unknown function (DUF933) LPH46_04305 PF01926 50S ribosome-binding GTPase LPH46_04310 PF01195 Peptidyl-tRNA hydrolase LPH46_04315 PF01386 Ribosomal L25p family LPH46_04315 PF14693 Ribosomal protein TL5, C-terminal domain LPH46_04320 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LPH46_04320 PF14572 Phosphoribosyl synthetase-associated domain LPH46_04330 PF08544 GHMP kinases C terminal LPH46_04330 PF00288 GHMP kinases N terminal domain LPH46_04335 PF03550 Outer membrane lipoprotein LolB LPH46_04345 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LPH46_04345 PF01488 Shikimate / quinate 5-dehydrogenase LPH46_04345 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LPH46_04350 PF00472 RF-1 domain LPH46_04350 PF03462 PCRF domain LPH46_04360 PF10672 S-adenosylmethionine-dependent methyltransferase LPH46_04360 PF02926 THUMP domain LPH46_04360 PF01170 Putative RNA methylase family UPF0020 LPH46_04425 PF00497 Bacterial extracellular solute-binding proteins, family 3 LPH46_04430 PF00528 Binding-protein-dependent transport system inner membrane component LPH46_04435 PF00005 ABC transporter LPH46_04440 PF00528 Binding-protein-dependent transport system inner membrane component LPH46_04445 PF13361 UvrD-like helicase C-terminal domain LPH46_04445 PF00580 UvrD/REP helicase N-terminal domain LPH46_04445 PF12705 PD-(D/E)XK nuclease superfamily LPH46_04455 PF01914 MarC family integral membrane protein LPH46_04460 PF00462 Glutaredoxin LPH46_04465 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LPH46_04465 PF02222 ATP-grasp domain LPH46_04470 PF00731 AIR carboxylase LPH46_04490 PF07732 Multicopper oxidase LPH46_04490 PF07731 Multicopper oxidase LPH46_04500 PF00580 UvrD/REP helicase N-terminal domain LPH46_04500 PF13361 UvrD-like helicase C-terminal domain LPH46_04510 PF04349 Periplasmic glucan biosynthesis protein, MdoG LPH46_04515 PF01343 Peptidase family S49 LPH46_04520 PF01554 MatE LPH46_04535 PF00270 DEAD/DEAH box helicase LPH46_04535 PF00271 Helicase conserved C-terminal domain LPH46_04535 PF18074 Primosomal protein N C-terminal domain LPH46_04535 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LPH46_04535 PF17764 3′ DNA-binding domain (3′BD) LPH46_04540 PF00140 Sigma-70 factor, region 1.2 LPH46_04540 PF04542 Sigma-70 region 2 LPH46_04540 PF04545 Sigma-70, region 4 LPH46_04545 PF03167 Uracil DNA glycosylase superfamily LPH46_04550 PF01339 CheB methylesterase LPH46_04550 PF00072 Response regulator receiver domain LPH46_04555 PF18075 FtsX extracellular domain LPH46_04560 PF00005 ABC transporter LPH46_04565 PF12300 ATP-dependent RNA helicase RhlB LPH46_04565 PF00271 Helicase conserved C-terminal domain LPH46_04565 PF00270 DEAD/DEAH box helicase LPH46_04570 PF00085 Thioredoxin LPH46_04575 PF07497 Rho termination factor, RNA-binding domain LPH46_04575 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LPH46_04575 PF07498 Rho termination factor, N-terminal domain LPH46_04580 PF03971 Monomeric isocitrate dehydrogenase LPH46_04590 PF09704 CRISPR-associated protein (Cas_Cas5) LPH46_04605 PF13180 PDZ domain LPH46_04605 PF03572 Peptidase family S41 LPH46_04610 PF01551 Peptidase family M23 LPH46_04620 PF00150 Cellulase (glycosyl hydrolase family 5) LPH46_04640 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LPH46_04640 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPH46_04645 PF04898 Glutamate synthase central domain LPH46_04645 PF01645 Conserved region in glutamate synthase LPH46_04645 PF01493 GXGXG motif LPH46_04645 PF00310 Glutamine amidotransferases class-II LPH46_04655 PF03807 NADP oxidoreductase coenzyme F420-dependent LPH46_04655 PF14748 Pyrroline-5-carboxylate reductase dimerisation LPH46_04740 PF04829 Pre-toxin domain with VENN motif LPH46_04740 PF13332 Hemagglutinin repeat LPH46_04740 PF05860 haemagglutination activity domain LPH46_04745 PF13018 Extended Signal Peptide of Type V secretion system LPH46_04745 PF13332 Hemagglutinin repeat LPH46_04745 PF04829 Pre-toxin domain with VENN motif LPH46_04745 PF05860 haemagglutination activity domain LPH46_04785 PF12008 Type I restriction and modification enzyme - subunit R C terminal LPH46_04785 PF18766 SWI2/SNF2 ATPase LPH46_04785 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LPH46_04790 PF01420 Type I restriction modification DNA specificity domain LPH46_04800 PF12161 HsdM N-terminal domain LPH46_04800 PF02384 N-6 DNA Methylase LPH46_04885 PF11867 Domain of unknown function (DUF3387) LPH46_04885 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LPH46_04885 PF18766 SWI2/SNF2 ATPase LPH46_04890 PF01420 Type I restriction modification DNA specificity domain LPH46_04895 PF02384 N-6 DNA Methylase LPH46_04900 PF02384 N-6 DNA Methylase LPH46_05005 PF01638 HxlR-like helix-turn-helix LPH46_05010 PF00106 short chain dehydrogenase LPH46_05030 PF00912 Transglycosylase LPH46_05030 PF00905 Penicillin binding protein transpeptidase domain LPH46_05030 PF14814 Bifunctional transglycosylase second domain LPH46_05040 PF04851 Type III restriction enzyme, res subunit LPH46_05040 PF13307 Helicase C-terminal domain LPH46_05050 PF00484 Carbonic anhydrase LPH46_05055 PF00534 Glycosyl transferases group 1 LPH46_05060 PF01522 Polysaccharide deacetylase LPH46_05070 PF09383 NIL domain LPH46_05070 PF00005 ABC transporter LPH46_05075 PF00528 Binding-protein-dependent transport system inner membrane component LPH46_05080 PF03180 NLPA lipoprotein LPH46_05095 PF02817 e3 binding domain LPH46_05095 PF00364 Biotin-requiring enzyme LPH46_05095 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LPH46_05100 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LPH46_05100 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPH46_05110 PF01545 Cation efflux family LPH46_05115 PF01053 Cys/Met metabolism PLP-dependent enzyme LPH46_05120 PF00561 alpha/beta hydrolase fold LPH46_05125 PF01551 Peptidase family M23 LPH46_05135 PF01975 Survival protein SurE LPH46_05150 PF01551 Peptidase family M23 LPH46_05150 PF01476 LysM domain LPH46_05165 PF01168 Alanine racemase, N-terminal domain LPH46_05165 PF00842 Alanine racemase, C-terminal domain LPH46_05170 PF01266 FAD dependent oxidoreductase LPH46_05180 PF01641 SelR domain LPH46_05200 PF01915 Glycosyl hydrolase family 3 C-terminal domain LPH46_05200 PF14310 Fibronectin type III-like domain LPH46_05200 PF00933 Glycosyl hydrolase family 3 N terminal domain LPH46_05200 PF07691 PA14 domain LPH46_05215 PF17678 Glycosyl hydrolase family 92 N-terminal domain LPH46_05215 PF07971 Glycosyl hydrolase family 92 LPH46_05220 PF01301 Glycosyl hydrolases family 35 LPH46_05225 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LPH46_05230 PF09312 SurA N-terminal domain LPH46_05230 PF00639 PPIC-type PPIASE domain LPH46_05235 PF04453 LPS transport system D LPH46_05245 PF01494 FAD binding domain LPH46_05250 PF01494 FAD binding domain LPH46_05255 PF12833 Helix-turn-helix domain LPH46_05255 PF06719 AraC-type transcriptional regulator N-terminus LPH46_05260 PF02525 Flavodoxin-like fold LPH46_05270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH46_05270 PF03466 LysR substrate binding domain LPH46_05275 PF14824 Sirohaem biosynthesis protein central LPH46_05275 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LPH46_05275 PF10414 Sirohaem synthase dimerisation region LPH46_05280 PF00291 Pyridoxal-phosphate dependent enzyme LPH46_05290 PF00274 Fructose-bisphosphate aldolase class-I LPH46_05305 PF00224 Pyruvate kinase, barrel domain LPH46_05305 PF02887 Pyruvate kinase, alpha/beta domain LPH46_05310 PF00162 Phosphoglycerate kinase LPH46_05325 PF00749 tRNA synthetases class I (E and Q), catalytic domain LPH46_05330 PF01475 Ferric uptake regulator family LPH46_05345 PF00150 Cellulase (glycosyl hydrolase family 5) LPH46_05345 PF00553 Cellulose binding domain LPH46_05355 PF05193 Peptidase M16 inactive domain LPH46_05355 PF00675 Insulinase (Peptidase family M16) LPH46_05370 PF03330 Lytic transglycolase LPH46_05375 PF07517 SecA DEAD-like domain LPH46_05375 PF02810 SEC-C motif LPH46_05375 PF07516 SecA Wing and Scaffold domain LPH46_05375 PF01043 SecA preprotein cross-linking domain LPH46_05380 PF01476 LysM domain LPH46_05380 PF08525 Opacity-associated protein A N-terminal motif LPH46_05380 PF01551 Peptidase family M23 LPH46_05390 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LPH46_05395 PF12327 FtsZ family, C-terminal domain LPH46_05395 PF00091 Tubulin/FtsZ family, GTPase domain LPH46_05400 PF02491 SHS2 domain inserted in FTSA LPH46_05405 PF08478 POTRA domain, FtsQ-type LPH46_05405 PF03799 Cell division protein FtsQ LPH46_05410 PF07478 D-ala D-ala ligase C-terminus LPH46_05415 PF08245 Mur ligase middle domain LPH46_05415 PF02875 Mur ligase family, glutamate ligase domain LPH46_05415 PF01225 Mur ligase family, catalytic domain LPH46_05420 PF03033 Glycosyltransferase family 28 N-terminal domain LPH46_05420 PF04101 Glycosyltransferase family 28 C-terminal domain LPH46_05425 PF01098 Cell cycle protein LPH46_05430 PF00953 Glycosyl transferase family 4 LPH46_05435 PF01225 Mur ligase family, catalytic domain LPH46_05435 PF02875 Mur ligase family, glutamate ligase domain LPH46_05435 PF08245 Mur ligase middle domain LPH46_05440 PF01225 Mur ligase family, catalytic domain LPH46_05440 PF02875 Mur ligase family, glutamate ligase domain LPH46_05440 PF08245 Mur ligase middle domain LPH46_05445 PF03717 Penicillin-binding Protein dimerisation domain LPH46_05445 PF00905 Penicillin binding protein transpeptidase domain LPH46_05450 PF04999 Cell division protein FtsL LPH46_05455 PF01795 MraW methylase family LPH46_05460 PF02381 MraZ protein, putative antitoxin-like LPH46_05465 PF02080 TrkA-C domain LPH46_05465 PF03600 Citrate transporter LPH46_05470 PF02390 Putative methyltransferase LPH46_05475 PF05690 Thiazole biosynthesis protein ThiG LPH46_05485 PF00657 GDSL-like Lipase/Acylhydrolase LPH46_05485 PF03797 Autotransporter beta-domain LPH46_05515 PF07977 FabA-like domain LPH46_05540 PF00692 dUTPase LPH46_05550 PF01119 DNA mismatch repair protein, C-terminal domain LPH46_05550 PF08676 MutL C terminal dimerisation domain LPH46_05555 PF01520 N-acetylmuramoyl-L-alanine amidase LPH46_05555 PF11741 AMIN domain LPH46_05560 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LPH46_05565 PF01256 Carbohydrate kinase LPH46_05565 PF03853 YjeF-related protein N-terminus LPH46_05570 PF13742 OB-fold nucleic acid binding domain LPH46_05570 PF02601 Exonuclease VII, large subunit LPH46_05585 PF00570 HRDC domain LPH46_05585 PF01612 3'-5' exonuclease LPH46_05615 PF00216 Bacterial DNA-binding protein LPH46_05620 PF03147 Ferredoxin-fold anticodon binding domain LPH46_05620 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LPH46_05620 PF01588 Putative tRNA binding domain LPH46_05620 PF03484 tRNA synthetase B5 domain LPH46_05620 PF03483 B3/4 domain LPH46_05625 PF01409 tRNA synthetases class II core domain (F) LPH46_05625 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LPH46_05630 PF00453 Ribosomal protein L20 LPH46_05635 PF01632 Ribosomal protein L35 LPH46_05640 PF05198 Translation initiation factor IF-3, N-terminal domain LPH46_05640 PF00707 Translation initiation factor IF-3, C-terminal domain LPH46_05645 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LPH46_05645 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LPH46_05645 PF02824 TGS domain LPH46_05645 PF03129 Anticodon binding domain LPH46_05660 PF18030 RimK PreATP-grasp domain LPH46_05660 PF08443 RimK-like ATP-grasp domain LPH46_05665 PF00486 Transcriptional regulatory protein, C terminal LPH46_05665 PF00072 Response regulator receiver domain LPH46_05670 PF00989 PAS fold LPH46_05670 PF11808 Phosphate regulon sensor protein PhoR LPH46_05670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH46_05670 PF00512 His Kinase A (phospho-acceptor) domain LPH46_05675 PF01121 Dephospho-CoA kinase LPH46_05680 PF01478 Type IV leader peptidase family LPH46_05680 PF06750 Bacterial Peptidase A24 N-terminal domain LPH46_05685 PF00482 Type II secretion system (T2SS), protein F LPH46_05690 PF00114 Pilin (bacterial filament) LPH46_05690 PF07963 Prokaryotic N-terminal methylation motif LPH46_05700 PF00114 Pilin (bacterial filament) LPH46_05700 PF07963 Prokaryotic N-terminal methylation motif LPH46_05705 PF00114 Pilin (bacterial filament) LPH46_05705 PF07963 Prokaryotic N-terminal methylation motif LPH46_05715 PF00437 Type II/IV secretion system protein LPH46_05715 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LPH46_05720 PF02954 Bacterial regulatory protein, Fis family LPH46_05720 PF00072 Response regulator receiver domain LPH46_05720 PF00158 Sigma-54 interaction domain LPH46_05725 PF00512 His Kinase A (phospho-acceptor) domain LPH46_05725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH46_05730 PF00549 CoA-ligase LPH46_05730 PF08442 ATP-grasp domain LPH46_05735 PF00549 CoA-ligase LPH46_05735 PF02629 CoA binding domain LPH46_05740 PF01926 50S ribosome-binding GTPase LPH46_05740 PF12631 MnmE helical domain LPH46_05740 PF10396 GTP-binding protein TrmE N-terminus LPH46_05750 PF02096 60Kd inner membrane protein LPH46_05750 PF14849 YidC periplasmic domain LPH46_05755 PF00825 Ribonuclease P LPH46_05760 PF00468 Ribosomal protein L34 LPH46_05765 PF00308 Bacterial dnaA protein LPH46_05765 PF08299 Bacterial dnaA protein helix-turn-helix LPH46_05765 PF11638 DnaA N-terminal domain LPH46_05770 PF02767 DNA polymerase III beta subunit, central domain LPH46_05770 PF00712 DNA polymerase III beta subunit, N-terminal domain LPH46_05770 PF02768 DNA polymerase III beta subunit, C-terminal domain LPH46_05775 PF02463 RecF/RecN/SMC N terminal domain LPH46_05780 PF00204 DNA gyrase B LPH46_05780 PF00986 DNA gyrase B subunit, carboxyl terminus LPH46_05780 PF18053 DNA gyrase B subunit insert domain LPH46_05780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH46_05780 PF01751 Toprim domain LPH46_05790 PF01435 Peptidase family M48 LPH46_05800 PF03544 Gram-negative bacterial TonB protein C-terminal LPH46_05805 PF01618 MotA/TolQ/ExbB proton channel family LPH46_05810 PF02472 Biopolymer transport protein ExbD/TolR LPH46_05815 PF02472 Biopolymer transport protein ExbD/TolR LPH46_05835 PF01218 Coproporphyrinogen III oxidase LPH46_05860 PF00793 DAHP synthetase I family LPH46_05865 PF07963 Prokaryotic N-terminal methylation motif LPH46_05865 PF00114 Pilin (bacterial filament) LPH46_05885 PF05567 Neisseria PilC beta-propeller domain LPH46_05890 PF00114 Pilin (bacterial filament) LPH46_05890 PF07963 Prokaryotic N-terminal methylation motif LPH46_05895 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LPH46_05900 PF00155 Aminotransferase class I and II LPH46_05905 PF01741 Large-conductance mechanosensitive channel, MscL LPH46_05930 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ LPH46_05940 PF17757 UvrB interaction domain LPH46_05940 PF03461 TRCF domain LPH46_05940 PF00271 Helicase conserved C-terminal domain LPH46_05940 PF00270 DEAD/DEAH box helicase LPH46_05940 PF02559 CarD-like/TRCF domain LPH46_05945 PF01220 Dehydroquinase class II LPH46_05950 PF00364 Biotin-requiring enzyme LPH46_05955 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LPH46_05955 PF00289 Biotin carboxylase, N-terminal domain LPH46_05955 PF02785 Biotin carboxylase C-terminal domain LPH46_05960 PF13361 UvrD-like helicase C-terminal domain LPH46_05960 PF00580 UvrD/REP helicase N-terminal domain LPH46_05965 PF00970 Oxidoreductase FAD-binding domain LPH46_05965 PF00175 Oxidoreductase NAD-binding domain LPH46_05965 PF00042 Globin LPH46_05975 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ LPH46_05985 PF08535 KorB domain LPH46_05985 PF06613 KorB C-terminal beta-barrel domain LPH46_05985 PF02195 ParB-like nuclease domain LPH46_06000 PF06968 Biotin and Thiamin Synthesis associated domain LPH46_06000 PF04055 Radical SAM superfamily LPH46_06005 PF01734 Patatin-like phospholipase LPH46_06010 PF01040 UbiA prenyltransferase family LPH46_06025 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family LPH46_06060 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LPH46_06060 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LPH46_06070 PF02881 SRP54-type protein, helical bundle domain LPH46_06070 PF02978 Signal peptide binding domain LPH46_06070 PF00448 SRP54-type protein, GTPase domain LPH46_06090 PF00577 Outer membrane usher protein LPH46_06090 PF13954 PapC N-terminal domain LPH46_06090 PF13953 PapC C-terminal domain LPH46_06095 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LPH46_06095 PF02753 Pili assembly chaperone PapD, C-terminal domain LPH46_06100 PF16970 Type-1 fimbrial protein, A LPH46_06105 PF02464 Competence-damaged protein LPH46_06110 PF00083 Sugar (and other) transporter LPH46_06115 PF01926 50S ribosome-binding GTPase LPH46_06115 PF13167 GTP-binding GTPase N-terminal LPH46_06115 PF16360 GTP-binding GTPase Middle Region LPH46_06120 PF17209 Hfq protein LPH46_06130 PF00809 Pterin binding enzyme LPH46_06135 PF00004 ATPase family associated with various cellular activities (AAA) LPH46_06135 PF06480 FtsH Extracellular LPH46_06135 PF01434 Peptidase family M41 LPH46_06135 PF17862 AAA+ lid domain LPH46_06140 PF01728 FtsJ-like methyltransferase LPH46_06145 PF01985 CRS1 / YhbY (CRM) domain LPH46_06160 PF00920 Dehydratase family LPH46_06190 PF03279 Bacterial lipid A biosynthesis acyltransferase LPH46_06195 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) LPH46_06210 PF00886 Ribosomal protein S16 LPH46_06215 PF01782 RimM N-terminal domain LPH46_06215 PF05239 PRC-barrel domain LPH46_06220 PF01746 tRNA (Guanine-1)-methyltransferase LPH46_06225 PF01245 Ribosomal protein L19 LPH46_06230 PF00557 Metallopeptidase family M24 LPH46_06240 PF14602 Hexapeptide repeat of succinyl-transferase LPH46_06240 PF00132 Bacterial transferase hexapeptide (six repeats) LPH46_06240 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal LPH46_06245 PF03960 ArsC family LPH46_06250 PF01546 Peptidase family M20/M25/M40 LPH46_06250 PF07687 Peptidase dimerisation domain LPH46_06255 PF13537 Glutamine amidotransferase domain LPH46_06255 PF00733 Asparagine synthase LPH46_06265 PF03060 Nitronate monooxygenase LPH46_06275 PF00717 Peptidase S24-like LPH46_06275 PF01726 LexA DNA binding domain LPH46_06280 PF00154 recA bacterial DNA recombination protein LPH46_06285 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LPH46_06285 PF01411 tRNA synthetases class II (A) LPH46_06285 PF02272 DHHA1 domain LPH46_06290 PF02599 Global regulator protein family LPH46_06300 PF01432 Peptidase family M3 LPH46_06315 PF07731 Multicopper oxidase LPH46_06315 PF07732 Multicopper oxidase LPH46_06315 PF00394 Multicopper oxidase LPH46_06320 PF05275 Copper resistance protein B precursor (CopB) LPH46_06325 PF08264 Anticodon-binding domain of tRNA LPH46_06325 PF00133 tRNA synthetases class I (I, L, M and V) LPH46_06325 PF10458 Valyl tRNA synthetase tRNA binding arm LPH46_06345 PF00883 Cytosol aminopeptidase family, catalytic domain LPH46_06345 PF02789 Cytosol aminopeptidase family, N-terminal domain LPH46_06365 PF01380 SIS domain LPH46_06380 PF17284 Spermidine synthase tetramerisation domain LPH46_06385 PF17810 Arginine decarboxylase helical bundle domain LPH46_06385 PF17944 Arginine decarboxylase C-terminal helical extension LPH46_06385 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LPH46_06390 PF00106 short chain dehydrogenase LPH46_06400 PF03485 Arginyl tRNA synthetase N terminal domain LPH46_06400 PF00750 tRNA synthetases class I (R) LPH46_06400 PF05746 DALR anticodon binding domain LPH46_06405 PF04002 RadC-like JAB domain LPH46_06410 PF04127 DNA / pantothenate metabolism flavoprotein LPH46_06410 PF02441 Flavoprotein LPH46_06415 PF00692 dUTPase LPH46_06420 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LPH46_06420 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LPH46_06420 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LPH46_06420 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LPH46_06430 PF00156 Phosphoribosyl transferase domain LPH46_06485 PF07690 Major Facilitator Superfamily LPH46_06490 PF03702 Anhydro-N-acetylmuramic acid kinase LPH46_06495 PF04225 Opacity-associated protein A LysM-like domain LPH46_06495 PF01551 Peptidase family M23 LPH46_06500 PF00579 tRNA synthetases class I (W and Y) LPH46_06530 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LPH46_06530 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LPH46_06560 PF16658 Class II release factor RF3, C-terminal domain LPH46_06560 PF00009 Elongation factor Tu GTP binding domain LPH46_06565 PF03006 Haemolysin-III related LPH46_06570 PF00535 Glycosyl transferase family 2 LPH46_06575 PF01026 TatD related DNase LPH46_06590 PF01597 Glycine cleavage H-protein LPH46_06595 PF08669 Glycine cleavage T-protein C-terminal barrel domain LPH46_06595 PF01571 Aminomethyltransferase folate-binding domain LPH46_06605 PF16200 C-terminal region of band_7 LPH46_06605 PF01145 SPFH domain / Band 7 family LPH46_06610 PF03819 MazG nucleotide pyrophosphohydrolase domain LPH46_06615 PF00459 Inositol monophosphatase family LPH46_06620 PF00293 NUDIX domain LPH46_06625 PF00202 Aminotransferase class-III LPH46_06630 PF04452 RNA methyltransferase LPH46_06640 PF00271 Helicase conserved C-terminal domain LPH46_06640 PF00270 DEAD/DEAH box helicase LPH46_06645 PF01242 6-pyruvoyl tetrahydropterin synthase LPH46_06670 PF03653 Uncharacterised protein family (UPF0093) LPH46_06675 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LPH46_06680 PF14579 Helix-hairpin-helix motif LPH46_06680 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LPH46_06680 PF07733 Bacterial DNA polymerase III alpha NTPase domain LPH46_06680 PF01336 OB-fold nucleic acid binding domain LPH46_06680 PF02811 PHP domain LPH46_06685 PF01259 SAICAR synthetase LPH46_06690 PF05099 Tellurite resistance protein TerB LPH46_06690 PF00226 DnaJ domain LPH46_06695 PF00834 Ribulose-phosphate 3 epimerase family LPH46_06705 PF00425 chorismate binding enzyme LPH46_06705 PF04715 Anthranilate synthase component I, N terminal region LPH46_06710 PF00117 Glutamine amidotransferase class-I LPH46_06715 PF00591 Glycosyl transferase family, a/b domain LPH46_06715 PF02885 Glycosyl transferase family, helical bundle domain LPH46_06720 PF00218 Indole-3-glycerol phosphate synthase LPH46_06735 PF12849 PBP superfamily domain LPH46_06755 PF01321 Creatinase/Prolidase N-terminal domain LPH46_06755 PF00557 Metallopeptidase family M24 LPH46_06770 PF01702 Queuine tRNA-ribosyltransferase LPH46_06775 PF02699 Preprotein translocase subunit LPH46_06780 PF07549 SecD/SecF GG Motif LPH46_06780 PF13721 SecD export protein N-terminal TM region LPH46_06780 PF02355 Protein export membrane protein LPH46_06785 PF07549 SecD/SecF GG Motif LPH46_06785 PF02355 Protein export membrane protein LPH46_06795 PF01743 Poly A polymerase head domain LPH46_06795 PF12626 Polymerase A arginine-rich C-terminus LPH46_06795 PF12627 Probable RNA and SrmB- binding site of polymerase A LPH46_06800 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LPH46_06805 PF02548 Ketopantoate hydroxymethyltransferase LPH46_06810 PF02569 Pantoate-beta-alanine ligase LPH46_06815 PF02261 Aspartate decarboxylase LPH46_06820 PF00342 Phosphoglucose isomerase LPH46_06830 PF17384 RimP C-terminal SH3 domain LPH46_06830 PF02576 RimP N-terminal domain LPH46_06835 PF00575 S1 RNA binding domain LPH46_06835 PF13184 NusA-like KH domain LPH46_06835 PF08529 NusA N-terminal domain LPH46_06840 PF00009 Elongation factor Tu GTP binding domain LPH46_06840 PF11987 Translation-initiation factor 2 LPH46_06840 PF08364 Bacterial translation initiation factor IF-2 associated region LPH46_06840 PF04760 Translation initiation factor IF-2, N-terminal region LPH46_06845 PF02033 Ribosome-binding factor A LPH46_06850 PF16198 tRNA pseudouridylate synthase B C-terminal domain LPH46_06850 PF01509 TruB family pseudouridylate synthase (N terminal domain) LPH46_06850 PF09157 Pseudouridine synthase II TruB, C-terminal LPH46_06855 PF00312 Ribosomal protein S15 LPH46_06860 PF00013 KH domain LPH46_06860 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LPH46_06860 PF01138 3' exoribonuclease family, domain 1 LPH46_06860 PF03725 3' exoribonuclease family, domain 2 LPH46_06860 PF00575 S1 RNA binding domain LPH46_06865 PF01638 HxlR-like helix-turn-helix LPH46_06870 PF05368 NmrA-like family LPH46_06875 PF00873 AcrB/AcrD/AcrF family LPH46_06885 PF00999 Sodium/hydrogen exchanger family LPH46_06905 PF00271 Helicase conserved C-terminal domain LPH46_06905 PF00270 DEAD/DEAH box helicase LPH46_06905 PF03880 DbpA RNA binding domain LPH46_06910 PF00766 Electron transfer flavoprotein FAD-binding domain LPH46_06910 PF01012 Electron transfer flavoprotein domain LPH46_06915 PF01012 Electron transfer flavoprotein domain LPH46_06920 PF16363 GDP-mannose 4,6 dehydratase LPH46_06925 PF00483 Nucleotidyl transferase LPH46_06930 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LPH46_06935 PF04321 RmlD substrate binding domain LPH46_06940 PF01050 Mannose-6-phosphate isomerase LPH46_06940 PF00483 Nucleotidyl transferase LPH46_06945 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LPH46_06945 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LPH46_06945 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LPH46_06945 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LPH46_06995 PF00082 Subtilase family LPH46_06995 PF03797 Autotransporter beta-domain LPH46_06995 PF12951 Passenger-associated-transport-repeat LPH46_07000 PF00082 Subtilase family LPH46_07000 PF12951 Passenger-associated-transport-repeat LPH46_07000 PF03797 Autotransporter beta-domain LPH46_07005 PF06779 Uncharacterised MFS-type transporter YbfB LPH46_07010 PF07669 Eco57I restriction-modification methylase LPH46_07020 PF00365 Phosphofructokinase LPH46_07030 PF08245 Mur ligase middle domain LPH46_07030 PF02875 Mur ligase family, glutamate ligase domain LPH46_07030 PF01225 Mur ligase family, catalytic domain LPH46_07035 PF01569 PAP2 superfamily LPH46_07055 PF00892 EamA-like transporter family LPH46_07060 PF02789 Cytosol aminopeptidase family, N-terminal domain LPH46_07060 PF00883 Cytosol aminopeptidase family, catalytic domain LPH46_07070 PF01594 AI-2E family transporter LPH46_07090 PF00595 PDZ domain LPH46_07095 PF01370 NAD dependent epimerase/dehydratase family LPH46_07095 PF08338 Domain of unknown function (DUF1731) LPH46_07100 PF13193 AMP-binding enzyme C-terminal domain LPH46_07100 PF00501 AMP-binding enzyme LPH46_07105 PF00694 Aconitase C-terminal domain LPH46_07105 PF00330 Aconitase family (aconitate hydratase) LPH46_07120 PF11791 Aconitate B N-terminal domain LPH46_07120 PF06434 Aconitate hydratase 2 N-terminus LPH46_07120 PF00330 Aconitase family (aconitate hydratase) LPH46_07135 PF02384 N-6 DNA Methylase LPH46_07140 PF01420 Type I restriction modification DNA specificity domain LPH46_07155 PF18766 SWI2/SNF2 ATPase LPH46_07155 PF11867 Domain of unknown function (DUF3387) LPH46_07155 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LPH46_07175 PF00121 Triosephosphate isomerase LPH46_07190 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LPH46_07195 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LPH46_07200 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LPH46_07205 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LPH46_07215 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LPH46_07215 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LPH46_07215 PF10531 SLBB domain LPH46_07220 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal LPH46_07220 PF00384 Molybdopterin oxidoreductase LPH46_07220 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LPH46_07225 PF00146 NADH dehydrogenase LPH46_07230 PF12838 4Fe-4S dicluster domain LPH46_07235 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LPH46_07240 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LPH46_07245 PF00361 Proton-conducting membrane transporter LPH46_07245 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LPH46_07250 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus LPH46_07250 PF00361 Proton-conducting membrane transporter LPH46_07255 PF00361 Proton-conducting membrane transporter LPH46_07260 PF00106 short chain dehydrogenase LPH46_07265 PF03600 Citrate transporter LPH46_07275 PF00486 Transcriptional regulatory protein, C terminal LPH46_07275 PF00072 Response regulator receiver domain LPH46_07280 PF08521 Two-component sensor kinase N-terminal LPH46_07280 PF00512 His Kinase A (phospho-acceptor) domain LPH46_07280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH46_07290 PF00196 Bacterial regulatory proteins, luxR family LPH46_07290 PF00072 Response regulator receiver domain LPH46_07295 PF00672 HAMP domain LPH46_07295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH46_07295 PF00512 His Kinase A (phospho-acceptor) domain LPH46_07295 PF00072 Response regulator receiver domain LPH46_07295 PF01627 Hpt domain LPH46_07305 PF00375 Sodium:dicarboxylate symporter family LPH46_07310 PF01515 Phosphate acetyl/butaryl transferase LPH46_07310 PF03949 Malic enzyme, NAD binding domain LPH46_07310 PF00390 Malic enzyme, N-terminal domain LPH46_07315 PF00183 Hsp90 protein LPH46_07315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH46_07325 PF01467 Cytidylyltransferase-like LPH46_07335 PF00037 4Fe-4S binding domain LPH46_07345 PF00990 Diguanylate cyclase, GGDEF domain LPH46_07350 PF01551 Peptidase family M23 LPH46_07350 PF01476 LysM domain LPH46_07355 PF01979 Amidohydrolase family LPH46_07360 PF01809 Putative membrane protein insertion efficiency factor LPH46_07365 PF01258 Prokaryotic dksA/traR C4-type zinc finger LPH46_07395 PF02657 Fe-S metabolism associated domain LPH46_07400 PF09190 DALR domain LPH46_07400 PF01406 tRNA synthetases class I (C) catalytic domain LPH46_07410 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LPH46_07410 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LPH46_07415 PF00764 Arginosuccinate synthase LPH46_07420 PF07687 Peptidase dimerisation domain LPH46_07420 PF01546 Peptidase family M20/M25/M40 LPH46_07425 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase LPH46_07425 PF00696 Amino acid kinase family LPH46_07435 PF01118 Semialdehyde dehydrogenase, NAD binding domain LPH46_07440 PF00206 Lyase LPH46_07450 PF01472 PUA domain LPH46_07450 PF00696 Amino acid kinase family LPH46_07455 PF00171 Aldehyde dehydrogenase family LPH46_07465 PF02796 Helix-turn-helix domain of resolvase LPH46_07465 PF00239 Resolvase, N terminal domain LPH46_07490 PF00239 Resolvase, N terminal domain LPH46_07490 PF02796 Helix-turn-helix domain of resolvase LPH46_07505 PF13700 Domain of unknown function (DUF4158) LPH46_07505 PF01526 Tn3 transposase DDE domain LPH46_07535 PF03524 Conjugal transfer protein LPH46_07575 PF01593 Flavin containing amine oxidoreductase LPH46_07585 PF02627 Carboxymuconolactone decarboxylase family LPH46_07605 PF03466 LysR substrate binding domain LPH46_07605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH46_07610 PF05016 ParE toxin of type II toxin-antitoxin system, parDE LPH46_07615 PF09386 Antitoxin ParD LPH46_07620 PF02796 Helix-turn-helix domain of resolvase LPH46_07620 PF00239 Resolvase, N terminal domain LPH46_07645 PF02796 Helix-turn-helix domain of resolvase LPH46_07645 PF00239 Resolvase, N terminal domain LPH46_07685 PF06594 Haemolysin-type calcium binding protein related domain LPH46_07685 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) LPH46_07690 PF14437 MafB19-like deaminase LPH46_07695 PF01325 Iron dependent repressor, N-terminal DNA binding domain LPH46_07695 PF02742 Iron dependent repressor, metal binding and dimerisation domain LPH46_07700 PF01566 Natural resistance-associated macrophage protein LPH46_07715 PF04377 Arginine-tRNA-protein transferase, C terminus LPH46_07715 PF04376 Arginine-tRNA-protein transferase, N terminus LPH46_07750 PF00082 Subtilase family LPH46_07750 PF12951 Passenger-associated-transport-repeat LPH46_07750 PF03797 Autotransporter beta-domain LPH46_07780 PF01553 Acyltransferase LPH46_07790 PF05221 S-adenosyl-L-homocysteine hydrolase LPH46_07790 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain LPH46_07805 PF01351 Ribonuclease HII LPH46_07810 PF02684 Lipid-A-disaccharide synthetase LPH46_07815 PF00132 Bacterial transferase hexapeptide (six repeats) LPH46_07815 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LPH46_07820 PF07977 FabA-like domain LPH46_07825 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LPH46_07825 PF00132 Bacterial transferase hexapeptide (six repeats) LPH46_07830 PF07244 Surface antigen variable number repeat LPH46_07830 PF01103 Surface antigen LPH46_07835 PF17820 PDZ domain LPH46_07835 PF02163 Peptidase family M50 LPH46_07840 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LPH46_07840 PF13288 DXP reductoisomerase C-terminal domain LPH46_07840 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LPH46_07850 PF01255 Putative undecaprenyl diphosphate synthase LPH46_07855 PF01765 Ribosome recycling factor LPH46_07880 PF04305 Protein of unknown function (DUF455) LPH46_07885 PF00696 Amino acid kinase family LPH46_07955 PF01081 KDPG and KHG aldolase LPH46_07960 PF00920 Dehydratase family LPH46_07965 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LPH46_07970 PF02685 Glucokinase LPH46_07975 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LPH46_07975 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LPH46_07980 PF17912 MalK OB fold domain LPH46_07980 PF00005 ABC transporter LPH46_07995 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LPH46_08000 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LPH46_08005 PF02910 Fumarate reductase flavoprotein C-term LPH46_08005 PF00890 FAD binding domain LPH46_08010 PF13085 2Fe-2S iron-sulfur cluster binding domain LPH46_08010 PF13237 4Fe-4S dicluster domain LPH46_08015 PF03937 Flavinator of succinate dehydrogenase LPH46_08025 PF12704 MacB-like periplasmic core domain LPH46_08025 PF02687 FtsX-like permease family LPH46_08030 PF00005 ABC transporter LPH46_08035 PF03772 Competence protein LPH46_08035 PF00753 Metallo-beta-lactamase superfamily LPH46_08050 PF00005 ABC transporter LPH46_08050 PF00664 ABC transporter transmembrane region LPH46_08055 PF02606 Tetraacyldisaccharide-1-P 4'-kinase LPH46_08060 PF01883 Iron-sulfur cluster assembly protein LPH46_08060 PF10609 NUBPL iron-transfer P-loop NTPase LPH46_08075 PF13091 PLD-like domain LPH46_08100 PF03358 NADPH-dependent FMN reductase LPH46_08105 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LPH46_08105 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LPH46_08120 PF01300 Telomere recombination LPH46_08125 PF01751 Toprim domain LPH46_08125 PF13368 Topoisomerase C-terminal repeat LPH46_08125 PF01131 DNA topoisomerase LPH46_08135 PF04361 Protein of unknown function (DUF494) LPH46_08140 PF17782 DprA winged helix domain LPH46_08140 PF02481 DNA recombination-mediator protein A LPH46_08150 PF01327 Polypeptide deformylase LPH46_08155 PF02911 Formyl transferase, C-terminal domain LPH46_08155 PF00551 Formyl transferase LPH46_08160 PF01189 16S rRNA methyltransferase RsmB/F LPH46_08160 PF01029 NusB family LPH46_08165 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase LPH46_08180 PF07963 Prokaryotic N-terminal methylation motif LPH46_08180 PF00114 Pilin (bacterial filament) LPH46_08300 PF01367 5'-3' exonuclease, C-terminal SAM fold LPH46_08300 PF01612 3'-5' exonuclease LPH46_08300 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LPH46_08300 PF00476 DNA polymerase family A LPH46_08305 PF05173 Dihydrodipicolinate reductase, C-terminus LPH46_08305 PF01113 Dihydrodipicolinate reductase, N-terminus LPH46_08310 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LPH46_08310 PF00117 Glutamine amidotransferase class-I LPH46_08315 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LPH46_08315 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LPH46_08315 PF02142 MGS-like domain LPH46_08320 PF01272 Transcription elongation factor, GreA/GreB, C-term LPH46_08320 PF03449 Transcription elongation factor, N-terminal LPH46_08330 PF01368 DHH family LPH46_08330 PF17768 RecJ OB domain LPH46_08330 PF02272 DHHA1 domain LPH46_08340 PF01336 OB-fold nucleic acid binding domain LPH46_08340 PF00152 tRNA synthetases class II (D, K and N) LPH46_08345 PF00072 Response regulator receiver domain LPH46_08350 PF00512 His Kinase A (phospho-acceptor) domain LPH46_08350 PF00072 Response regulator receiver domain LPH46_08350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH46_08350 PF01627 Hpt domain LPH46_08355 PF00378 Enoyl-CoA hydratase/isomerase LPH46_08360 PF00696 Amino acid kinase family LPH46_08360 PF01842 ACT domain LPH46_08370 PF08245 Mur ligase middle domain LPH46_08390 PF00293 NUDIX domain LPH46_08400 PF02219 Methylenetetrahydrofolate reductase LPH46_08410 PF02545 Maf-like protein LPH46_08415 PF10150 Ribonuclease E/G family LPH46_08415 PF00575 S1 RNA binding domain LPH46_08425 PF01523 Putative modulator of DNA gyrase LPH46_08430 PF04751 Protein of unknown function (DUF615) LPH46_08435 PF01523 Putative modulator of DNA gyrase LPH46_08445 PF06250 YhcG PDDEXK nuclease domain LPH46_08445 PF17761 DUF1016 N-terminal domain LPH46_08470 PF03466 LysR substrate binding domain LPH46_08470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH46_08475 PF03358 NADPH-dependent FMN reductase LPH46_08485 PF00107 Zinc-binding dehydrogenase LPH46_08485 PF08240 Alcohol dehydrogenase GroES-like domain LPH46_08500 PF00248 Aldo/keto reductase family LPH46_08515 PF14602 Hexapeptide repeat of succinyl-transferase LPH46_08515 PF00132 Bacterial transferase hexapeptide (six repeats) LPH46_08515 PF12804 MobA-like NTP transferase domain LPH46_08525 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LPH46_08525 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LPH46_08530 PF02874 ATP synthase alpha/beta family, beta-barrel domain LPH46_08530 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LPH46_08535 PF00231 ATP synthase LPH46_08540 PF00306 ATP synthase alpha/beta chain, C terminal domain LPH46_08540 PF02874 ATP synthase alpha/beta family, beta-barrel domain LPH46_08540 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LPH46_08545 PF00213 ATP synthase delta (OSCP) subunit LPH46_08550 PF00430 ATP synthase B/B' CF(0) LPH46_08555 PF00137 ATP synthase subunit C LPH46_08560 PF00119 ATP synthase A chain LPH46_08570 PF00338 Ribosomal protein S10p/S20e LPH46_08575 PF00297 Ribosomal protein L3 LPH46_08580 PF00573 Ribosomal protein L4/L1 family LPH46_08585 PF00276 Ribosomal protein L23 LPH46_08590 PF03947 Ribosomal Proteins L2, C-terminal domain LPH46_08590 PF00181 Ribosomal Proteins L2, RNA binding domain LPH46_08595 PF00203 Ribosomal protein S19 LPH46_08600 PF00237 Ribosomal protein L22p/L17e LPH46_08605 PF07650 KH domain LPH46_08605 PF00189 Ribosomal protein S3, C-terminal domain LPH46_08610 PF00252 Ribosomal protein L16p/L10e LPH46_08615 PF00831 Ribosomal L29 protein LPH46_08620 PF00366 Ribosomal protein S17 LPH46_08625 PF00238 Ribosomal protein L14p/L23e LPH46_08630 PF00467 KOW motif LPH46_08630 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LPH46_08635 PF00281 Ribosomal protein L5 LPH46_08635 PF00673 ribosomal L5P family C-terminus LPH46_08640 PF00253 Ribosomal protein S14p/S29e LPH46_08645 PF00410 Ribosomal protein S8 LPH46_08650 PF00347 Ribosomal protein L6 LPH46_08655 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LPH46_08660 PF03719 Ribosomal protein S5, C-terminal domain LPH46_08660 PF00333 Ribosomal protein S5, N-terminal domain LPH46_08665 PF00327 Ribosomal protein L30p/L7e LPH46_08670 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LPH46_08675 PF00344 SecY translocase LPH46_08680 PF00416 Ribosomal protein S13/S18 LPH46_08685 PF00411 Ribosomal protein S11 LPH46_08690 PF01479 S4 domain LPH46_08690 PF00163 Ribosomal protein S4/S9 N-terminal domain LPH46_08695 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LPH46_08695 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LPH46_08695 PF01000 RNA polymerase Rpb3/RpoA insert domain LPH46_08700 PF01196 Ribosomal protein L17 LPH46_08705 PF04380 Membrane fusogenic activity LPH46_08710 PF13335 Magnesium chelatase, subunit ChlI C-terminal LPH46_08710 PF01078 Magnesium chelatase, subunit ChlI LPH46_08715 PF00561 alpha/beta hydrolase fold LPH46_08730 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LPH46_08730 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LPH46_08730 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LPH46_08745 PF05698 Bacterial trigger factor protein (TF) C-terminus LPH46_08745 PF05697 Bacterial trigger factor protein (TF) LPH46_08750 PF00574 Clp protease LPH46_08755 PF06689 ClpX C4-type zinc finger LPH46_08755 PF10431 C-terminal, D2-small domain, of ClpB protein LPH46_08755 PF07724 AAA domain (Cdc48 subfamily) LPH46_08760 PF05362 Lon protease (S16) C-terminal proteolytic domain LPH46_08760 PF02190 ATP-dependent protease La (LON) substrate-binding domain LPH46_08760 PF00004 ATPase family associated with various cellular activities (AAA) LPH46_08765 PF00216 Bacterial DNA-binding protein LPH46_08790 PF00317 Ribonucleotide reductase, all-alpha domain LPH46_08790 PF03477 ATP cone domain LPH46_08790 PF02867 Ribonucleotide reductase, barrel domain LPH46_08795 PF00268 Ribonucleotide reductase, small chain LPH46_08820 PF01479 S4 domain LPH46_08820 PF00849 RNA pseudouridylate synthase LPH46_08825 PF13419 Haloacid dehalogenase-like hydrolase LPH46_08835 PF00830 Ribosomal L28 family LPH46_08840 PF00471 Ribosomal protein L33 LPH46_08845 PF13396 Phospholipase_D-nuclease N-terminal LPH46_08845 PF13091 PLD-like domain LPH46_08860 PF07963 Prokaryotic N-terminal methylation motif LPH46_08860 PF00114 Pilin (bacterial filament) LPH46_08880 PF01612 3'-5' exonuclease LPH46_08880 PF01367 5'-3' exonuclease, C-terminal SAM fold LPH46_08880 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LPH46_08880 PF00476 DNA polymerase family A LPH46_08900 PF00959 Phage lysozyme LPH46_08920 PF01555 DNA methylase LPH46_08940 PF02798 Glutathione S-transferase, N-terminal domain LPH46_08940 PF00043 Glutathione S-transferase, C-terminal domain LPH46_08945 PF00056 lactate/malate dehydrogenase, NAD binding domain LPH46_08945 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LPH46_08950 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LPH46_08955 PF00679 Elongation factor G C-terminus LPH46_08955 PF03144 Elongation factor Tu domain 2 LPH46_08955 PF00009 Elongation factor Tu GTP binding domain LPH46_08970 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LPH46_08970 PF00529 HlyD membrane-fusion protein of T1SS LPH46_08995 PF00664 ABC transporter transmembrane region LPH46_08995 PF03412 Peptidase C39 family LPH46_08995 PF00005 ABC transporter LPH46_09000 PF01061 ABC-2 type transporter LPH46_09005 PF00005 ABC transporter LPH46_09010 PF05567 Neisseria PilC beta-propeller domain LPH46_09025 PF08482 ATP-dependent helicase C-terminal LPH46_09025 PF00271 Helicase conserved C-terminal domain LPH46_09025 PF04408 Helicase associated domain (HA2) LPH46_09025 PF00270 DEAD/DEAH box helicase LPH46_09035 PF13185 GAF domain LPH46_09040 PF17243 POTRA domain TamA domain 1 LPH46_09040 PF01103 Surface antigen LPH46_09045 PF04357 TamB, inner membrane protein subunit of TAM complex LPH46_09060 PF00285 Citrate synthase, C-terminal domain LPH46_09065 PF00330 Aconitase family (aconitate hydratase) LPH46_09065 PF00694 Aconitase C-terminal domain LPH46_09070 PF04303 PrpF protein LPH46_09090 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain LPH46_09090 PF00207 Alpha-2-macroglobulin family LPH46_09090 PF11974 Bacterial alpha-2-macroglobulin MG3 domain LPH46_09090 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain LPH46_09090 PF17962 Bacterial macroglobulin domain 6 LPH46_09090 PF01835 MG2 domain LPH46_09090 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain LPH46_09090 PF07703 Alpha-2-macroglobulin bait region domain LPH46_09095 PF02583 Metal-sensitive transcriptional repressor LPH46_09100 PF03824 High-affinity nickel-transport protein LPH46_09105 PF07859 alpha/beta hydrolase fold LPH46_09110 PF12833 Helix-turn-helix domain LPH46_09110 PF12852 Cupin LPH46_09125 PF01447 Thermolysin metallopeptidase, catalytic domain LPH46_09125 PF02868 Thermolysin metallopeptidase, alpha-helical domain LPH46_09125 PF16485 Protealysin propeptide LPH46_09130 PF00929 Exonuclease LPH46_09135 PF00924 Mechanosensitive ion channel LPH46_09135 PF05552 Conserved TM helix LPH46_09140 PF00391 PEP-utilising enzyme, mobile domain LPH46_09140 PF02896 PEP-utilising enzyme, TIM barrel domain LPH46_09140 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LPH46_09145 PF03618 Kinase/pyrophosphorylase LPH46_09165 PF04286 Protein of unknown function (DUF445) LPH46_09180 PF04359 Protein of unknown function (DUF493) LPH46_09185 PF03099 Biotin/lipoate A/B protein ligase family LPH46_09190 PF04055 Radical SAM superfamily LPH46_09190 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family LPH46_09220 PF03471 Transporter associated domain LPH46_09220 PF00571 CBS domain LPH46_09220 PF01595 Cyclin M transmembrane N-terminal domain LPH46_09235 PF01751 Toprim domain LPH46_09235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH46_09235 PF00986 DNA gyrase B subunit, carboxyl terminus LPH46_09235 PF00204 DNA gyrase B LPH46_09245 PF00117 Glutamine amidotransferase class-I LPH46_09245 PF06418 CTP synthase N-terminus LPH46_09250 PF00793 DAHP synthetase I family LPH46_09255 PF00113 Enolase, C-terminal TIM barrel domain LPH46_09255 PF03952 Enolase, N-terminal domain LPH46_09260 PF04977 Septum formation initiator LPH46_09265 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LPH46_09270 PF02542 YgbB family LPH46_09275 PF01713 Smr domain LPH46_09300 PF02470 MlaD protein LPH46_09300 PF03886 ABC-type transport auxiliary lipoprotein component LPH46_09305 PF00005 ABC transporter LPH46_09310 PF02405 Permease MlaE LPH46_09385 PF04093 rod shape-determining protein MreD LPH46_09390 PF03717 Penicillin-binding Protein dimerisation domain LPH46_09390 PF00905 Penicillin binding protein transpeptidase domain LPH46_09395 PF01098 Cell cycle protein LPH46_09400 PF02547 Queuosine biosynthesis protein LPH46_09405 PF02824 TGS domain LPH46_09405 PF04607 Region found in RelA / SpoT proteins LPH46_09405 PF13291 ACT domain LPH46_09420 PF03776 Septum formation topological specificity factor MinE LPH46_09425 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LPH46_09430 PF03775 Septum formation inhibitor MinC, C-terminal domain LPH46_09430 PF05209 Septum formation inhibitor MinC, N-terminal domain LPH46_09450 PF00730 HhH-GPD superfamily base excision DNA repair protein LPH46_09460 PF01292 Prokaryotic cytochrome b561 LPH46_09465 PF04264 YceI-like domain LPH46_09470 PF00072 Response regulator receiver domain LPH46_09470 PF09308 LuxQ, periplasmic LPH46_09470 PF00512 His Kinase A (phospho-acceptor) domain LPH46_09470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH46_09480 PF01208 Uroporphyrinogen decarboxylase (URO-D) LPH46_09485 PF01761 3-dehydroquinate synthase LPH46_09490 PF01202 Shikimate kinase LPH46_09495 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LPH46_09495 PF01243 Pyridoxamine 5'-phosphate oxidase LPH46_09505 PF00749 tRNA synthetases class I (E and Q), catalytic domain LPH46_09505 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain LPH46_09515 PF03932 CutC family LPH46_09535 PF00528 Binding-protein-dependent transport system inner membrane component LPH46_09540 PF00528 Binding-protein-dependent transport system inner membrane component LPH46_09545 PF12857 TOBE-like domain LPH46_09545 PF00005 ABC transporter LPH46_09585 PF01381 Helix-turn-helix LPH46_09665 PF10065 Uncharacterized conserved protein (DUF2303) LPH46_09690 PF04546 Sigma-70, non-essential region LPH46_09690 PF04545 Sigma-70, region 4 LPH46_09690 PF04539 Sigma-70 region 3 LPH46_09690 PF04542 Sigma-70 region 2 LPH46_09690 PF00140 Sigma-70 factor, region 1.2 LPH46_09690 PF03979 Sigma-70 factor, region 1.1 LPH46_09700 PF00521 DNA gyrase/topoisomerase IV, subunit A LPH46_09700 PF03989 DNA gyrase C-terminal domain, beta-propeller LPH46_09710 PF02321 Outer membrane efflux protein LPH46_09715 PF00529 HlyD membrane-fusion protein of T1SS LPH46_09715 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LPH46_09720 PF07690 Major Facilitator Superfamily LPH46_09725 PF12697 Alpha/beta hydrolase family LPH46_09730 PF00155 Aminotransferase class I and II LPH46_09740 PF01040 UbiA prenyltransferase family LPH46_09745 PF00753 Metallo-beta-lactamase superfamily LPH46_09750 PF12627 Probable RNA and SrmB- binding site of polymerase A LPH46_09750 PF01743 Poly A polymerase head domain LPH46_09750 PF01966 HD domain LPH46_09755 PF14718 Soluble lytic murein transglycosylase L domain LPH46_09755 PF01464 Transglycosylase SLT domain LPH46_09765 PF02666 Phosphatidylserine decarboxylase LPH46_09820 PF00456 Transketolase, thiamine diphosphate binding domain LPH46_09820 PF17831 Pyruvate dehydrogenase E1 component middle domain LPH46_09825 PF00698 Acyl transferase domain LPH46_09835 PF00550 Phosphopantetheine attachment site LPH46_09840 PF02801 Beta-ketoacyl synthase, C-terminal domain LPH46_09840 PF00109 Beta-ketoacyl synthase, N-terminal domain LPH46_09845 PF00425 chorismate binding enzyme LPH46_09845 PF04715 Anthranilate synthase component I, N terminal region LPH46_09850 PF02618 YceG-like family LPH46_09855 PF09115 DNA polymerase III, delta subunit, C terminal LPH46_09875 PF00459 Inositol monophosphatase family LPH46_09880 PF00588 SpoU rRNA Methylase family LPH46_09885 PF04055 Radical SAM superfamily LPH46_09890 PF09285 Elongation factor P, C-terminal LPH46_09890 PF08207 Elongation factor P (EF-P) KOW-like domain LPH46_09890 PF01132 Elongation factor P (EF-P) OB domain LPH46_09895 PF01979 Amidohydrolase family LPH46_09905 PF13419 Haloacid dehalogenase-like hydrolase LPH46_09915 PF00561 alpha/beta hydrolase fold LPH46_09920 PF08534 Redoxin LPH46_09950 PF00155 Aminotransferase class I and II LPH46_09955 PF00795 Carbon-nitrogen hydrolase LPH46_09965 PF00849 RNA pseudouridylate synthase LPH46_09965 PF01479 S4 domain LPH46_09970 PF04079 Segregation and condensation complex subunit ScpB LPH46_09975 PF02616 Segregation and condensation protein ScpA LPH46_10005 PF00528 Binding-protein-dependent transport system inner membrane component LPH46_10010 PF00528 Binding-protein-dependent transport system inner membrane component LPH46_10025 PF00795 Carbon-nitrogen hydrolase LPH46_10030 PF04371 Porphyromonas-type peptidyl-arginine deiminase LPH46_10040 PF00444 Ribosomal protein L36 LPH46_10045 PF02224 Cytidylate kinase LPH46_10050 PF00575 S1 RNA binding domain LPH46_10055 PF00216 Bacterial DNA-binding protein LPH46_10065 PF18073 Rubredoxin metal binding domain LPH46_10070 PF00953 Glycosyl transferase family 4 LPH46_10075 PF02719 Polysaccharide biosynthesis protein LPH46_10080 PF00483 Nucleotidyl transferase LPH46_10085 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LPH46_10085 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LPH46_10090 PF00571 CBS domain LPH46_10090 PF00478 IMP dehydrogenase / GMP reductase domain LPH46_10095 PF00117 Glutamine amidotransferase class-I LPH46_10095 PF00958 GMP synthase C terminal domain LPH46_10095 PF02540 NAD synthase LPH46_10145 PF09571 XcyI restriction endonuclease LPH46_10160 PF17755 UvrA DNA-binding domain LPH46_10160 PF17760 UvrA interaction domain LPH46_10160 PF00005 ABC transporter LPH46_10165 PF00829 Ribosomal prokaryotic L21 protein LPH46_10170 PF01016 Ribosomal L27 protein LPH46_10175 PF01926 50S ribosome-binding GTPase LPH46_10175 PF01018 GTP1/OBG LPH46_10180 PF01649 Ribosomal protein S20 LPH46_10185 PF03023 Lipid II flippase MurJ LPH46_10190 PF01687 Riboflavin kinase LPH46_10190 PF06574 FAD synthetase LPH46_10195 PF06827 Zinc finger found in FPG and IleRS LPH46_10195 PF08264 Anticodon-binding domain of tRNA LPH46_10195 PF00133 tRNA synthetases class I (I, L, M and V) LPH46_10200 PF01252 Signal peptidase (SPase) II LPH46_10205 PF02401 LytB protein LPH46_10275 PF13091 PLD-like domain LPH46_10275 PF13087 AAA domain LPH46_10280 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) LPH46_10280 PF06594 Haemolysin-type calcium binding protein related domain LPH46_10345 PF00664 ABC transporter transmembrane region LPH46_10345 PF00005 ABC transporter LPH46_10345 PF03412 Peptidase C39 family LPH46_10350 PF00155 Aminotransferase class I and II LPH46_10355 PF01522 Polysaccharide deacetylase LPH46_10360 PF00462 Glutaredoxin LPH46_10370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH46_10370 PF03466 LysR substrate binding domain LPH46_10380 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LPH46_10390 PF00857 Isochorismatase family LPH46_10400 PF00107 Zinc-binding dehydrogenase LPH46_10400 PF08240 Alcohol dehydrogenase GroES-like domain LPH46_10405 PF00107 Zinc-binding dehydrogenase LPH46_10405 PF08240 Alcohol dehydrogenase GroES-like domain LPH46_10425 PF00873 AcrB/AcrD/AcrF family LPH46_10430 PF00873 AcrB/AcrD/AcrF family LPH46_10435 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LPH46_10440 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term LPH46_10440 PF14489 QueF-like protein LPH46_10455 PF00330 Aconitase family (aconitate hydratase) LPH46_10460 PF00694 Aconitase C-terminal domain LPH46_10465 PF00180 Isocitrate/isopropylmalate dehydrogenase LPH46_10480 PF02397 Bacterial sugar transferase LPH46_10495 PF13439 Glycosyltransferase Family 4 LPH46_10495 PF00534 Glycosyl transferases group 1 LPH46_10505 PF01943 Polysaccharide biosynthesis protein LPH46_10520 PF00072 Response regulator receiver domain LPH46_10520 PF00486 Transcriptional regulatory protein, C terminal LPH46_10525 PF05958 tRNA (Uracil-5-)-methyltransferase LPH46_10530 PF01928 CYTH domain LPH46_10535 PF00933 Glycosyl hydrolase family 3 N terminal domain LPH46_10540 PF00156 Phosphoribosyl transferase domain LPH46_10545 PF01048 Phosphorylase superfamily LPH46_10550 PF00313 'Cold-shock' DNA-binding domain LPH46_10560 PF01668 SmpB protein LPH46_10570 PF03658 RnfH family Ubiquitin LPH46_10575 PF04355 SmpA / OmlA family LPH46_10580 PF01475 Ferric uptake regulator family LPH46_10585 PF02463 RecF/RecN/SMC N terminal domain LPH46_10590 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding LPH46_10590 PF01628 HrcA protein C terminal domain LPH46_10595 PF01025 GrpE LPH46_10600 PF00012 Hsp70 protein LPH46_10605 PF01556 DnaJ C terminal domain LPH46_10605 PF00684 DnaJ central domain LPH46_10605 PF00226 DnaJ domain LPH46_10615 PF00072 Response regulator receiver domain LPH46_10615 PF00486 Transcriptional regulatory protein, C terminal LPH46_10620 PF01219 Prokaryotic diacylglycerol kinase LPH46_10625 PF01790 Prolipoprotein diacylglyceryl transferase LPH46_10630 PF00303 Thymidylate synthase LPH46_10635 PF00186 Dihydrofolate reductase LPH46_10640 PF13700 Domain of unknown function (DUF4158) LPH46_10640 PF01526 Tn3 transposase DDE domain LPH46_10650 PF00072 Response regulator receiver domain LPH46_10650 PF00486 Transcriptional regulatory protein, C terminal LPH46_10655 PF13493 Domain of unknown function (DUF4118) LPH46_10655 PF13492 GAF domain LPH46_10655 PF00512 His Kinase A (phospho-acceptor) domain LPH46_10655 PF02702 Osmosensitive K+ channel His kinase sensor domain LPH46_10655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH46_10660 PF02669 K+-transporting ATPase, c chain LPH46_10670 PF03814 Potassium-transporting ATPase A subunit LPH46_10685 PF00149 Calcineurin-like phosphoesterase LPH46_10690 PF04379 ApaG domain LPH46_10695 PF00398 Ribosomal RNA adenine dimethylase LPH46_10700 PF00929 Exonuclease LPH46_10705 PF01895 PhoU domain LPH46_10710 PF00005 ABC transporter LPH46_10715 PF00528 Binding-protein-dependent transport system inner membrane component LPH46_10720 PF00528 Binding-protein-dependent transport system inner membrane component LPH46_10725 PF12849 PBP superfamily domain LPH46_10730 PF02254 TrkA-N domain LPH46_10730 PF00999 Sodium/hydrogen exchanger family LPH46_10735 PF07715 TonB-dependent Receptor Plug Domain LPH46_10735 PF00593 TonB dependent receptor LPH46_10740 PF01323 DSBA-like thioredoxin domain LPH46_10750 PF00005 ABC transporter LPH46_10750 PF12848 ABC transporter LPH46_10765 PF01066 CDP-alcohol phosphatidyltransferase LPH46_10770 PF08459 UvrC Helix-hairpin-helix N-terminal LPH46_10770 PF02151 UvrB/uvrC motif LPH46_10770 PF01541 GIY-YIG catalytic domain LPH46_10775 PF01451 Low molecular weight phosphotyrosine protein phosphatase LPH46_10780 PF02348 Cytidylyltransferase LPH46_10785 PF10609 NUBPL iron-transfer P-loop NTPase LPH46_10790 PF00202 Aminotransferase class-III LPH46_10800 PF00490 Delta-aminolevulinic acid dehydratase LPH46_10810 PF12146 Serine aminopeptidase, S33 LPH46_10825 PF01134 Glucose inhibited division protein A LPH46_10825 PF13932 GidA associated domain LPH46_10845 PF13649 Methyltransferase domain LPH46_10865 PF02649 Type I GTP cyclohydrolase folE2 LPH46_10870 PF00132 Bacterial transferase hexapeptide (six repeats) LPH46_10875 PF00873 AcrB/AcrD/AcrF family LPH46_10880 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LPH46_10880 PF00529 HlyD membrane-fusion protein of T1SS LPH46_10885 PF05088 Bacterial NAD-glutamate dehydrogenase LPH46_10890 PF01513 ATP-NAD kinase LPH46_10910 PF12706 Beta-lactamase superfamily domain LPH46_10920 PF00929 Exonuclease LPH46_10920 PF08411 Exonuclease C-terminal LPH46_10940 PF00999 Sodium/hydrogen exchanger family LPH46_10950 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LPH46_10960 PF01812 5-formyltetrahydrofolate cyclo-ligase family LPH46_10980 PF03695 Uncharacterised protein family (UPF0149) LPH46_10985 PF00557 Metallopeptidase family M24 LPH46_10985 PF05195 Aminopeptidase P, N-terminal domain LPH46_10990 PF00293 NUDIX domain LPH46_11025 PF01063 Amino-transferase class IV LPH46_11040 PF02954 Bacterial regulatory protein, Fis family LPH46_11050 PF01381 Helix-turn-helix LPH46_11065 PF00535 Glycosyl transferase family 2 LPH46_11075 PF00925 GTP cyclohydrolase II LPH46_11085 PF08534 Redoxin LPH46_11110 PF00959 Phage lysozyme LPH46_11130 PF01367 5'-3' exonuclease, C-terminal SAM fold LPH46_11130 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LPH46_11130 PF00476 DNA polymerase family A LPH46_11130 PF01612 3'-5' exonuclease LPH46_11155 PF07963 Prokaryotic N-terminal methylation motif LPH46_11155 PF00114 Pilin (bacterial filament) LPH46_11170 PF16123 Hydroxyacylglutathione hydrolase C-terminus LPH46_11170 PF00753 Metallo-beta-lactamase superfamily LPH46_11180 PF00075 RNase H LPH46_11185 PF00929 Exonuclease LPH46_11205 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LPH46_11215 PF13632 Glycosyl transferase family group 2 LPH46_11220 PF02230 Phospholipase/Carboxylesterase LPH46_11225 PF07694 5TMR of 5TMR-LYT LPH46_11225 PF06580 Histidine kinase LPH46_11230 PF04397 LytTr DNA-binding domain LPH46_11230 PF00072 Response regulator receiver domain LPH46_11235 PF03900 Porphobilinogen deaminase, C-terminal domain LPH46_11235 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LPH46_11250 PF00437 Type II/IV secretion system protein LPH46_11255 PF00437 Type II/IV secretion system protein LPH46_11270 PF00535 Glycosyl transferase family 2 LPH46_11280 PF02801 Beta-ketoacyl synthase, C-terminal domain LPH46_11280 PF00109 Beta-ketoacyl synthase, N-terminal domain LPH46_11295 PF09924 Uncharacterised conserved protein (DUF2156) LPH46_11295 PF03706 Lysylphosphatidylglycerol synthase TM region LPH46_11300 PF01042 Endoribonuclease L-PSP LPH46_11315 PF01430 Hsp33 protein LPH46_11320 PF00912 Transglycosylase LPH46_11325 PF05190 MutS family domain IV LPH46_11325 PF01624 MutS domain I LPH46_11325 PF05188 MutS domain II LPH46_11325 PF05192 MutS domain III LPH46_11325 PF00488 MutS domain V LPH46_11330 PF01168 Alanine racemase, N-terminal domain LPH46_11345 PF08279 HTH domain LPH46_11345 PF02237 Biotin protein ligase C terminal domain LPH46_11345 PF03099 Biotin/lipoate A/B protein ligase family LPH46_11350 PF03309 Type III pantothenate kinase LPH46_11380 PF01183 Glycosyl hydrolases family 25 LPH46_11400 PF01381 Helix-turn-helix LPH46_11410 PF07963 Prokaryotic N-terminal methylation motif LPH46_11410 PF00114 Pilin (bacterial filament) LPH46_11510 PF00589 Phage integrase family LPH46_11525 PF00959 Phage lysozyme LPH46_11540 PF00574 Clp protease LPH46_11580 PF01022 Bacterial regulatory protein, arsR family LPH46_11595 PF00873 AcrB/AcrD/AcrF family LPH46_11620 PF00581 Rhodanese-like domain LPH46_11625 PF02556 Preprotein translocase subunit SecB LPH46_11630 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LPH46_11630 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LPH46_11655 PF12169 DNA polymerase III subunits gamma and tau domain III LPH46_11655 PF12170 DNA polymerase III tau subunit V interacting with alpha LPH46_11660 PF02575 YbaB/EbfC DNA-binding family LPH46_11665 PF13662 Toprim domain LPH46_11665 PF02132 RecR protein LPH46_11670 PF01230 HIT domain LPH46_11680 PF11992 Domain of unknown function (DUF3488) LPH46_11680 PF13559 Domain of unknown function (DUF4129) LPH46_11680 PF01841 Transglutaminase-like superfamily LPH46_11690 PF07726 ATPase family associated with various cellular activities (AAA) LPH46_11690 PF17863 AAA lid domain LPH46_11700 PF02620 Large ribosomal RNA subunit accumulation protein YceD LPH46_11705 PF01783 Ribosomal L32p protein family LPH46_11710 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LPH46_11710 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LPH46_11725 PF01341 Glycosyl hydrolases family 6 LPH46_11725 PF00553 Cellulose binding domain LPH46_11725 PF00041 Fibronectin type III domain LPH46_11730 PF00682 HMGL-like LPH46_11730 PF08502 LeuA allosteric (dimerisation) domain LPH46_11735 PF00291 Pyridoxal-phosphate dependent enzyme LPH46_11745 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LPH46_11745 PF00205 Thiamine pyrophosphate enzyme, central domain LPH46_11745 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LPH46_11750 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LPH46_11750 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LPH46_11755 PF17804 Tail specific protease N-terminal domain LPH46_11755 PF03572 Peptidase family S41 LPH46_11755 PF11818 C-terminal domain of tail specific protease (DUF3340) LPH46_11755 PF00595 PDZ domain LPH46_11760 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family LPH46_11765 PF02566 OsmC-like protein LPH46_11770 PF03969 AFG1-like ATPase LPH46_11775 PF02129 X-Pro dipeptidyl-peptidase (S15 family) LPH46_11780 PF02492 CobW/HypB/UreG, nucleotide-binding domain LPH46_11780 PF07683 Cobalamin synthesis protein cobW C-terminal domain LPH46_11790 PF00551 Formyl transferase LPH46_11800 PF03109 ABC1 family LPH46_11810 PF12241 Trans-2-enoyl-CoA reductase catalytic region LPH46_11810 PF07055 Enoyl reductase FAD binding domain LPH46_11810 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase LPH46_11830 PF00881 Nitroreductase family LPH46_11835 PF04264 YceI-like domain LPH46_11840 PF02673 Bacitracin resistance protein BacA LPH46_11845 PF00120 Glutamine synthetase, catalytic domain LPH46_11845 PF03951 Glutamine synthetase, beta-Grasp domain LPH46_11850 PF00543 Nitrogen regulatory protein P-II LPH46_11855 PF00909 Ammonium Transporter Family LPH46_11870 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LPH46_11870 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LPH46_11875 PF02910 Fumarate reductase flavoprotein C-term LPH46_11875 PF00890 FAD binding domain LPH46_11880 PF02445 Quinolinate synthetase A protein LPH46_11885 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LPH46_11885 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LPH46_11890 PF01026 TatD related DNase