locus-tag class description GT347_00035 PF07859 alpha/beta hydrolase fold GT347_00050 PF04055 Radical SAM superfamily GT347_00050 PF06968 Biotin and Thiamin Synthesis associated domain GT347_00060 PF00155 Aminotransferase class I and II GT347_00065 PF00202 Aminotransferase class-III GT347_00070 PF16921 Tex protein YqgF-like domain GT347_00070 PF00575 S1 RNA binding domain GT347_00070 PF17674 HHH domain GT347_00070 PF09371 Tex-like protein N-terminal domain GT347_00080 PF02254 TrkA-N domain GT347_00080 PF00999 Sodium/hydrogen exchanger family GT347_00115 PF00005 ABC transporter GT347_00120 PF12399 Branched-chain amino acid ATP-binding cassette transporter GT347_00120 PF00005 ABC transporter GT347_00130 PF02653 Branched-chain amino acid transport system / permease component GT347_00190 PF00258 Flavodoxin GT347_00195 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GT347_00195 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GT347_00205 PF13458 Periplasmic binding protein GT347_00220 PF02789 Cytosol aminopeptidase family, N-terminal domain GT347_00220 PF00883 Cytosol aminopeptidase family, catalytic domain GT347_00240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_00240 PF03466 LysR substrate binding domain GT347_00245 PF00155 Aminotransferase class I and II GT347_00250 PF01966 HD domain GT347_00250 PF11871 Domain of unknown function (DUF3391) GT347_00260 PF03009 Glycerophosphoryl diester phosphodiesterase family GT347_00265 PF00376 MerR family regulatory protein GT347_00265 PF09278 MerR, DNA binding GT347_00280 PF04055 Radical SAM superfamily GT347_00285 PF07733 Bacterial DNA polymerase III alpha NTPase domain GT347_00285 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GT347_00285 PF14579 Helix-hairpin-helix motif GT347_00285 PF02811 PHP domain GT347_00285 PF01336 OB-fold nucleic acid binding domain GT347_00300 PF00664 ABC transporter transmembrane region GT347_00300 PF00005 ABC transporter GT347_00310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_00310 PF08521 Two-component sensor kinase N-terminal GT347_00310 PF00512 His Kinase A (phospho-acceptor) domain GT347_00315 PF00072 Response regulator receiver domain GT347_00315 PF00486 Transcriptional regulatory protein, C terminal GT347_00325 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GT347_00345 PF05430 S-adenosyl-L-methionine-dependent methyltransferase GT347_00345 PF01266 FAD dependent oxidoreductase GT347_00350 PF00672 HAMP domain GT347_00350 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GT347_00350 PF02203 Tar ligand binding domain homologue GT347_00365 PF01507 Phosphoadenosine phosphosulfate reductase family GT347_00370 PF01507 Phosphoadenosine phosphosulfate reductase family GT347_00375 PF00009 Elongation factor Tu GTP binding domain GT347_00380 PF00037 4Fe-4S binding domain GT347_00380 PF11953 Domain of unknown function (DUF3470) GT347_00400 PF03401 Tripartite tricarboxylate transporter family receptor GT347_00410 PF13378 Enolase C-terminal domain-like GT347_00410 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GT347_00415 PF03401 Tripartite tricarboxylate transporter family receptor GT347_00420 PF00356 Bacterial regulatory proteins, lacI family GT347_00430 PF02515 CoA-transferase family III GT347_00435 PF03401 Tripartite tricarboxylate transporter family receptor GT347_00440 PF18158 Adaptive response protein AidB N-terminal domain GT347_00440 PF02770 Acyl-CoA dehydrogenase, middle domain GT347_00440 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GT347_00450 PF01261 Xylose isomerase-like TIM barrel GT347_00455 PF07005 Sugar-binding N-terminal domain GT347_00455 PF17042 Nucleotide-binding C-terminal domain GT347_00460 PF04166 Pyridoxal phosphate biosynthetic protein PdxA GT347_00465 PF03401 Tripartite tricarboxylate transporter family receptor GT347_00470 PF03466 LysR substrate binding domain GT347_00470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_00475 PF02558 Ketopantoate reductase PanE/ApbA GT347_00475 PF08546 Ketopantoate reductase PanE/ApbA C terminal GT347_00480 PF03707 Bacterial signalling protein N terminal repeat GT347_00480 PF00990 Diguanylate cyclase, GGDEF domain GT347_00480 PF00563 EAL domain GT347_00485 PF02515 CoA-transferase family III GT347_00490 PF01556 DnaJ C terminal domain GT347_00490 PF00226 DnaJ domain GT347_00500 PF00440 Bacterial regulatory proteins, tetR family GT347_00505 PF01144 Coenzyme A transferase GT347_00510 PF01144 Coenzyme A transferase GT347_00515 PF00196 Bacterial regulatory proteins, luxR family GT347_00515 PF00072 Response regulator receiver domain GT347_00525 PF01381 Helix-turn-helix GT347_00540 PF01161 Phosphatidylethanolamine-binding protein GT347_00545 PF01220 Dehydroquinase class II GT347_00555 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain GT347_00555 PF00749 tRNA synthetases class I (E and Q), catalytic domain GT347_00570 PF04960 Glutaminase GT347_00575 PF17092 Penicillin-binding protein OB-like domain GT347_00575 PF00905 Penicillin binding protein transpeptidase domain GT347_00575 PF00912 Transglycosylase GT347_00580 PF04262 Glutamate-cysteine ligase GT347_00590 PF02230 Phospholipase/Carboxylesterase GT347_00620 PF05567 Neisseria PilC beta-propeller domain GT347_00630 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GT347_00630 PF01872 RibD C-terminal domain GT347_00635 PF00677 Lumazine binding domain GT347_00640 PF00925 GTP cyclohydrolase II GT347_00640 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase GT347_00645 PF00885 6,7-dimethyl-8-ribityllumazine synthase GT347_00650 PF01029 NusB family GT347_00655 PF00155 Aminotransferase class I and II GT347_00675 PF03061 Thioesterase superfamily GT347_00680 PF01618 MotA/TolQ/ExbB proton channel family GT347_00685 PF02472 Biopolymer transport protein ExbD/TolR GT347_00705 PF04828 Glutathione-dependent formaldehyde-activating enzyme GT347_00710 PF00762 Ferrochelatase GT347_00720 PF13419 Haloacid dehalogenase-like hydrolase GT347_00735 PF00924 Mechanosensitive ion channel GT347_00735 PF12795 Mechanosensitive ion channel porin domain GT347_00735 PF12794 Mechanosensitive ion channel inner membrane domain 1 GT347_00740 PF01594 AI-2E family transporter GT347_00745 PF07715 TonB-dependent Receptor Plug Domain GT347_00745 PF00593 TonB dependent receptor GT347_00770 PF00672 HAMP domain GT347_00770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GT347_00770 PF02203 Tar ligand binding domain homologue GT347_00780 PF00072 Response regulator receiver domain GT347_00785 PF00512 His Kinase A (phospho-acceptor) domain GT347_00785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_00795 PF03626 Prokaryotic Cytochrome C oxidase subunit IV GT347_00800 PF00510 Cytochrome c oxidase subunit III GT347_00805 PF00115 Cytochrome C and Quinol oxidase polypeptide I GT347_00810 PF06481 COX Aromatic Rich Motif GT347_00810 PF00116 Cytochrome C oxidase subunit II, periplasmic domain GT347_00815 PF00083 Sugar (and other) transporter GT347_00815 PF07690 Major Facilitator Superfamily GT347_00825 PF03401 Tripartite tricarboxylate transporter family receptor GT347_00830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_00830 PF03466 LysR substrate binding domain GT347_00835 PF04909 Amidohydrolase GT347_00840 PF03401 Tripartite tricarboxylate transporter family receptor GT347_00845 PF02515 CoA-transferase family III GT347_00850 PF03328 HpcH/HpaI aldolase/citrate lyase family GT347_00855 PF00701 Dihydrodipicolinate synthetase family GT347_00865 PF00665 Integrase core domain GT347_00870 PF01557 Fumarylacetoacetate (FAA) hydrolase family GT347_00875 PF12833 Helix-turn-helix domain GT347_00880 PF00701 Dihydrodipicolinate synthetase family GT347_00885 PF05661 Protein of unknown function (DUF808) GT347_00890 PF02769 AIR synthase related protein, C-terminal domain GT347_00890 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain GT347_00890 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal GT347_00895 PF00557 Metallopeptidase family M24 GT347_00910 PF07729 FCD domain GT347_00910 PF00392 Bacterial regulatory proteins, gntR family GT347_00915 PF03401 Tripartite tricarboxylate transporter family receptor GT347_00920 PF03737 Aldolase/RraA GT347_00930 PF01966 HD domain GT347_00930 PF01909 Nucleotidyltransferase domain GT347_00930 PF08335 GlnD PII-uridylyltransferase GT347_00945 PF00528 Binding-protein-dependent transport system inner membrane component GT347_00950 PF00528 Binding-protein-dependent transport system inner membrane component GT347_00960 PF01327 Polypeptide deformylase GT347_00985 PF02463 RecF/RecN/SMC N terminal domain GT347_00985 PF06470 SMC proteins Flexible Hinge Domain GT347_01005 PF00343 Carbohydrate phosphorylase GT347_01015 PF00155 Aminotransferase class I and II GT347_01020 PF00437 Type II/IV secretion system protein GT347_01025 PF01546 Peptidase family M20/M25/M40 GT347_01025 PF07687 Peptidase dimerisation domain GT347_01030 PF05175 Methyltransferase small domain GT347_01050 PF00156 Phosphoribosyl transferase domain GT347_01050 PF05139 Erythromycin esterase GT347_01055 PF00665 Integrase core domain GT347_01065 PF00561 alpha/beta hydrolase fold GT347_01070 PF13493 Domain of unknown function (DUF4118) GT347_01070 PF00512 His Kinase A (phospho-acceptor) domain GT347_01070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_01070 PF00989 PAS fold GT347_01070 PF08447 PAS fold GT347_01070 PF13426 PAS domain GT347_01075 PF13426 PAS domain GT347_01075 PF07568 Histidine kinase GT347_01075 PF13581 Histidine kinase-like ATPase domain GT347_01080 PF00196 Bacterial regulatory proteins, luxR family GT347_01080 PF00072 Response regulator receiver domain GT347_01085 PF00196 Bacterial regulatory proteins, luxR family GT347_01085 PF00072 Response regulator receiver domain GT347_01100 PF00034 Cytochrome c GT347_01100 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GT347_01105 PF12318 Membrane bound FAD containing D-sorbitol dehydrogenase GT347_01110 PF05199 GMC oxidoreductase GT347_01110 PF00732 GMC oxidoreductase GT347_01125 PF00005 ABC transporter GT347_01140 PF03737 Aldolase/RraA GT347_01145 PF03401 Tripartite tricarboxylate transporter family receptor GT347_01150 PF00392 Bacterial regulatory proteins, gntR family GT347_01150 PF07729 FCD domain GT347_01175 PF00857 Isochorismatase family GT347_01180 PF02668 Taurine catabolism dioxygenase TauD, TfdA family GT347_01185 PF00005 ABC transporter GT347_01190 PF00528 Binding-protein-dependent transport system inner membrane component GT347_01200 PF03401 Tripartite tricarboxylate transporter family receptor GT347_01210 PF00672 HAMP domain GT347_01210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GT347_01210 PF02203 Tar ligand binding domain homologue GT347_01265 PF00239 Resolvase, N terminal domain GT347_01290 PF00989 PAS fold GT347_01290 PF00672 HAMP domain GT347_01290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_01290 PF18698 Histidine kinase sensor domain GT347_01290 PF00512 His Kinase A (phospho-acceptor) domain GT347_01300 PF00486 Transcriptional regulatory protein, C terminal GT347_01300 PF00072 Response regulator receiver domain GT347_01305 PF00239 Resolvase, N terminal domain GT347_01305 PF02796 Helix-turn-helix domain of resolvase GT347_01370 PF13840 ACT domain GT347_01370 PF00696 Amino acid kinase family GT347_01370 PF01842 ACT domain GT347_01375 PF09179 TilS substrate binding domain GT347_01375 PF01171 PP-loop family GT347_01380 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit GT347_01385 PF12833 Helix-turn-helix domain GT347_01385 PF00730 HhH-GPD superfamily base excision DNA repair protein GT347_01385 PF06029 AlkA N-terminal domain GT347_01385 PF02805 Metal binding domain of Ada GT347_01390 PF01406 tRNA synthetases class I (C) catalytic domain GT347_01390 PF09190 DALR domain GT347_01405 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD GT347_01410 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD GT347_01415 PF00149 Calcineurin-like phosphoesterase GT347_01435 PF03480 Bacterial extracellular solute-binding protein, family 7 GT347_01440 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component GT347_01445 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GT347_01450 PF13419 Haloacid dehalogenase-like hydrolase GT347_01475 PF06470 SMC proteins Flexible Hinge Domain GT347_01475 PF02463 RecF/RecN/SMC N terminal domain GT347_01490 PF01734 Patatin-like phospholipase GT347_01510 PF02796 Helix-turn-helix domain of resolvase GT347_01510 PF00239 Resolvase, N terminal domain GT347_01515 PF13188 PAS domain GT347_01515 PF00990 Diguanylate cyclase, GGDEF domain GT347_01515 PF03707 Bacterial signalling protein N terminal repeat GT347_01515 PF00563 EAL domain GT347_01550 PF07690 Major Facilitator Superfamily GT347_01555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_01555 PF03466 LysR substrate binding domain GT347_01560 PF01965 DJ-1/PfpI family GT347_01575 PF00117 Glutamine amidotransferase class-I GT347_01580 PF00675 Insulinase (Peptidase family M16) GT347_01580 PF05193 Peptidase M16 inactive domain GT347_01585 PF00958 GMP synthase C terminal domain GT347_01585 PF02540 NAD synthase GT347_01585 PF00117 Glutamine amidotransferase class-I GT347_01590 PF00478 IMP dehydrogenase / GMP reductase domain GT347_01590 PF00571 CBS domain GT347_01600 PF03658 RnfH family Ubiquitin GT347_01605 PF03364 Polyketide cyclase / dehydrase and lipid transport GT347_01610 PF01668 SmpB protein GT347_01615 PF01425 Amidase GT347_01620 PF00005 ABC transporter GT347_01625 PF00005 ABC transporter GT347_01635 PF02653 Branched-chain amino acid transport system / permease component GT347_01655 PF07995 Glucose / Sorbosone dehydrogenase GT347_01675 PF16198 tRNA pseudouridylate synthase B C-terminal domain GT347_01675 PF01509 TruB family pseudouridylate synthase (N terminal domain) GT347_01680 PF02033 Ribosome-binding factor A GT347_01685 PF11987 Translation-initiation factor 2 GT347_01685 PF00009 Elongation factor Tu GTP binding domain GT347_01685 PF08364 Bacterial translation initiation factor IF-2 associated region GT347_01685 PF04760 Translation initiation factor IF-2, N-terminal region GT347_01690 PF08529 NusA N-terminal domain GT347_01690 PF13184 NusA-like KH domain GT347_01695 PF02576 RimP N-terminal domain GT347_01705 PF00005 ABC transporter GT347_01705 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GT347_01710 PF00528 Binding-protein-dependent transport system inner membrane component GT347_01710 PF12911 N-terminal TM domain of oligopeptide transport permease C GT347_01715 PF00528 Binding-protein-dependent transport system inner membrane component GT347_01720 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GT347_01730 PF01068 ATP dependent DNA ligase domain GT347_01730 PF14743 DNA ligase OB-like domain GT347_01735 PF12256 Insecticide toxin TcdB middle/N-terminal region GT347_01735 PF12255 Insecticide toxin TcdB middle/C-terminal region GT347_01735 PF03534 Salmonella virulence plasmid 65kDa B protein GT347_01740 PF18413 Neuraminidase-like domain GT347_01740 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain GT347_01760 PF01145 SPFH domain / Band 7 family GT347_01800 PF00158 Sigma-54 interaction domain GT347_01800 PF02954 Bacterial regulatory protein, Fis family GT347_01800 PF00072 Response regulator receiver domain GT347_01810 PF03705 CheR methyltransferase, all-alpha domain GT347_01810 PF01339 CheB methylesterase GT347_01810 PF01739 CheR methyltransferase, SAM binding domain GT347_01810 PF08448 PAS fold GT347_01815 PF01810 LysE type translocator GT347_01830 PF01546 Peptidase family M20/M25/M40 GT347_01830 PF07687 Peptidase dimerisation domain GT347_01840 PF02311 AraC-like ligand binding domain GT347_01840 PF12833 Helix-turn-helix domain GT347_01845 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GT347_01850 PF07859 alpha/beta hydrolase fold GT347_01855 PF00596 Class II Aldolase and Adducin N-terminal domain GT347_01860 PF03401 Tripartite tricarboxylate transporter family receptor GT347_01865 PF01144 Coenzyme A transferase GT347_01870 PF01144 Coenzyme A transferase GT347_01875 PF02803 Thiolase, C-terminal domain GT347_01875 PF00108 Thiolase, N-terminal domain GT347_01885 PF00106 short chain dehydrogenase GT347_01890 PF07702 UTRA domain GT347_01890 PF00392 Bacterial regulatory proteins, gntR family GT347_01900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_01900 PF03466 LysR substrate binding domain GT347_01905 PF00596 Class II Aldolase and Adducin N-terminal domain GT347_01910 PF04909 Amidohydrolase GT347_01930 PF03401 Tripartite tricarboxylate transporter family receptor GT347_01940 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GT347_01940 PF02770 Acyl-CoA dehydrogenase, middle domain GT347_01940 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GT347_01950 PF03466 LysR substrate binding domain GT347_01950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_01960 PF02321 Outer membrane efflux protein GT347_01965 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GT347_01965 PF00529 HlyD membrane-fusion protein of T1SS GT347_01970 PF00873 AcrB/AcrD/AcrF family GT347_01975 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) GT347_01980 PF03588 Leucyl/phenylalanyl-tRNA protein transferase GT347_01985 PF04377 Arginine-tRNA-protein transferase, C terminus GT347_01985 PF04376 Arginine-tRNA-protein transferase, N terminus GT347_01990 PF09339 IclR helix-turn-helix domain GT347_01990 PF01614 Bacterial transcriptional regulator GT347_01995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_01995 PF03466 LysR substrate binding domain GT347_02000 PF03401 Tripartite tricarboxylate transporter family receptor GT347_02020 PF03401 Tripartite tricarboxylate transporter family receptor GT347_02030 PF02203 Tar ligand binding domain homologue GT347_02030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GT347_02030 PF00672 HAMP domain GT347_02045 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GT347_02060 PF00990 Diguanylate cyclase, GGDEF domain GT347_02060 PF00563 EAL domain GT347_02060 PF08495 FIST N domain GT347_02060 PF10442 FIST C domain GT347_02065 PF01970 Tripartite tricarboxylate transporter TctA family GT347_02080 PF00072 Response regulator receiver domain GT347_02080 PF00486 Transcriptional regulatory protein, C terminal GT347_02085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_02085 PF00512 His Kinase A (phospho-acceptor) domain GT347_02085 PF08521 Two-component sensor kinase N-terminal GT347_02090 PF01479 S4 domain GT347_02115 PF00282 Pyridoxal-dependent decarboxylase conserved domain GT347_02120 PF05170 AsmA family GT347_02135 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold GT347_02135 PF00271 Helicase conserved C-terminal domain GT347_02135 PF04408 Helicase associated domain (HA2) GT347_02135 PF11898 Domain of unknown function (DUF3418) GT347_02135 PF00270 DEAD/DEAH box helicase GT347_02140 PF00583 Acetyltransferase (GNAT) family GT347_02140 PF00696 Amino acid kinase family GT347_02145 PF02600 Disulfide bond formation protein DsbB GT347_02150 PF00005 ABC transporter GT347_02150 PF17850 CysA C-terminal regulatory domain GT347_02150 PF12857 TOBE-like domain GT347_02155 PF00528 Binding-protein-dependent transport system inner membrane component GT347_02160 PF00528 Binding-protein-dependent transport system inner membrane component GT347_02170 PF10417 C-terminal domain of 1-Cys peroxiredoxin GT347_02170 PF00578 AhpC/TSA family GT347_02175 PF00768 D-alanyl-D-alanine carboxypeptidase GT347_02180 PF08502 LeuA allosteric (dimerisation) domain GT347_02180 PF00682 HMGL-like GT347_02185 PF01066 CDP-alcohol phosphatidyltransferase GT347_02195 PF10369 Small subunit of acetolactate synthase GT347_02200 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GT347_02200 PF00205 Thiamine pyrophosphate enzyme, central domain GT347_02200 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GT347_02225 PF01219 Prokaryotic diacylglycerol kinase GT347_02230 PF03641 Possible lysine decarboxylase GT347_02235 PF00543 Nitrogen regulatory protein P-II GT347_02245 PF00719 Inorganic pyrophosphatase GT347_02250 PF02535 ZIP Zinc transporter GT347_02255 PF02777 Iron/manganese superoxide dismutases, C-terminal domain GT347_02255 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain GT347_02260 PF06463 Molybdenum Cofactor Synthesis C GT347_02260 PF04055 Radical SAM superfamily GT347_02265 PF12804 MobA-like NTP transferase domain GT347_02270 PF00075 RNase H GT347_02275 PF08241 Methyltransferase domain GT347_02280 PF16123 Hydroxyacylglutathione hydrolase C-terminus GT347_02280 PF00753 Metallo-beta-lactamase superfamily GT347_02285 PF01464 Transglycosylase SLT domain GT347_02285 PF01476 LysM domain GT347_02295 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GT347_02295 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GT347_02300 PF03401 Tripartite tricarboxylate transporter family receptor GT347_02310 PF03401 Tripartite tricarboxylate transporter family receptor GT347_02315 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GT347_02315 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GT347_02340 PF03466 LysR substrate binding domain GT347_02340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_02380 PF02743 Cache domain GT347_02380 PF00672 HAMP domain GT347_02380 PF00211 Adenylate and Guanylate cyclase catalytic domain GT347_02385 PF02203 Tar ligand binding domain homologue GT347_02385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GT347_02385 PF00672 HAMP domain GT347_02395 PF04193 PQ loop repeat GT347_02410 PF02132 RecR protein GT347_02410 PF13662 Toprim domain GT347_02415 PF02575 YbaB/EbfC DNA-binding family GT347_02425 PF02769 AIR synthase related protein, C-terminal domain GT347_02425 PF00586 AIR synthase related protein, N-terminal domain GT347_02435 PF01593 Flavin containing amine oxidoreductase GT347_02440 PF00085 Thioredoxin GT347_02445 PF07497 Rho termination factor, RNA-binding domain GT347_02445 PF07498 Rho termination factor, N-terminal domain GT347_02445 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GT347_02450 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GT347_02450 PF00205 Thiamine pyrophosphate enzyme, central domain GT347_02450 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GT347_02455 PF01197 Ribosomal protein L31 GT347_02465 PF01554 MatE GT347_02470 PF11808 Phosphate regulon sensor protein PhoR GT347_02470 PF00989 PAS fold GT347_02470 PF00512 His Kinase A (phospho-acceptor) domain GT347_02470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_02475 PF00072 Response regulator receiver domain GT347_02475 PF00486 Transcriptional regulatory protein, C terminal GT347_02480 PF01895 PhoU domain GT347_02485 PF00005 ABC transporter GT347_02490 PF00528 Binding-protein-dependent transport system inner membrane component GT347_02495 PF00528 Binding-protein-dependent transport system inner membrane component GT347_02500 PF12849 PBP superfamily domain GT347_02505 PF02541 Ppx/GppA phosphatase family GT347_02520 PF13090 Polyphosphate kinase C-terminal domain 2 GT347_02520 PF17941 Polyphosphate kinase C-terminal domain 1 GT347_02520 PF02503 Polyphosphate kinase middle domain GT347_02520 PF13089 Polyphosphate kinase N-terminal domain GT347_02530 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GT347_02530 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GT347_02530 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GT347_02530 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GT347_02535 PF00809 Pterin binding enzyme GT347_02540 PF06480 FtsH Extracellular GT347_02540 PF01434 Peptidase family M41 GT347_02540 PF17862 AAA+ lid domain GT347_02540 PF00004 ATPase family associated with various cellular activities (AAA) GT347_02545 PF01728 FtsJ-like methyltransferase GT347_02550 PF01985 CRS1 / YhbY (CRM) domain GT347_02565 PF01272 Transcription elongation factor, GreA/GreB, C-term GT347_02565 PF03449 Transcription elongation factor, N-terminal GT347_02575 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain GT347_02575 PF02142 MGS-like domain GT347_02575 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GT347_02580 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain GT347_02580 PF00117 Glutamine amidotransferase class-I GT347_02585 PF08032 RNA 2'-O ribose methyltransferase substrate binding GT347_02585 PF00588 SpoU rRNA Methylase family GT347_02590 PF01351 Ribonuclease HII GT347_02595 PF02684 Lipid-A-disaccharide synthetase GT347_02600 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 GT347_02600 PF00132 Bacterial transferase hexapeptide (six repeats) GT347_02605 PF07977 FabA-like domain GT347_02610 PF14602 Hexapeptide repeat of succinyl-transferase GT347_02610 PF00132 Bacterial transferase hexapeptide (six repeats) GT347_02610 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD GT347_02620 PF01103 Surface antigen GT347_02620 PF07244 Surface antigen variable number repeat GT347_02625 PF02163 Peptidase family M50 GT347_02625 PF17820 PDZ domain GT347_02630 PF13288 DXP reductoisomerase C-terminal domain GT347_02630 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase GT347_02630 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain GT347_02640 PF01255 Putative undecaprenyl diphosphate synthase GT347_02645 PF01765 Ribosome recycling factor GT347_02650 PF00696 Amino acid kinase family GT347_02655 PF00889 Elongation factor TS GT347_02660 PF00318 Ribosomal protein S2 GT347_02665 PF01256 Carbohydrate kinase GT347_02680 PF00106 short chain dehydrogenase GT347_02685 PF17876 Cold shock domain GT347_02685 PF00575 S1 RNA binding domain GT347_02685 PF00773 RNB domain GT347_02685 PF08461 Ribonuclease R winged-helix domain GT347_02685 PF08206 Ribonuclease B OB domain GT347_02695 PF00919 Uncharacterized protein family UPF0004 GT347_02695 PF18693 TRAM domain GT347_02695 PF04055 Radical SAM superfamily GT347_02700 PF07879 PHB/PHA accumulation regulator DNA-binding domain GT347_02700 PF05233 PHB accumulation regulatory domain GT347_02705 PF01569 PAP2 superfamily GT347_02720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_02720 PF01590 GAF domain GT347_02720 PF00360 Phytochrome region GT347_02720 PF08446 PAS fold GT347_02720 PF00512 His Kinase A (phospho-acceptor) domain GT347_02740 PF01757 Acyltransferase family GT347_02775 PF13291 ACT domain GT347_02775 PF04607 Region found in RelA / SpoT proteins GT347_02775 PF02824 TGS domain GT347_02785 PF00106 short chain dehydrogenase GT347_02795 PF00486 Transcriptional regulatory protein, C terminal GT347_02795 PF00072 Response regulator receiver domain GT347_02800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_02800 PF00672 HAMP domain GT347_02800 PF00512 His Kinase A (phospho-acceptor) domain GT347_02805 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GT347_02805 PF02542 YgbB family GT347_02810 PF02542 YgbB family GT347_02810 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GT347_02815 PF03461 TRCF domain GT347_02815 PF00270 DEAD/DEAH box helicase GT347_02815 PF02559 CarD-like/TRCF domain GT347_02815 PF00271 Helicase conserved C-terminal domain GT347_02815 PF17757 UvrB interaction domain GT347_02835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_02835 PF03466 LysR substrate binding domain GT347_02840 PF01070 FMN-dependent dehydrogenase GT347_02850 PF00085 Thioredoxin GT347_02860 PF00892 EamA-like transporter family GT347_02865 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain GT347_02865 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase GT347_02870 PF00270 DEAD/DEAH box helicase GT347_02870 PF00271 Helicase conserved C-terminal domain GT347_02880 PF00155 Aminotransferase class I and II GT347_02895 PF00633 Helix-hairpin-helix motif GT347_02895 PF10576 Iron-sulfur binding domain of endonuclease III GT347_02895 PF00730 HhH-GPD superfamily base excision DNA repair protein GT347_02955 PF02277 Phosphoribosyltransferase GT347_02965 PF02277 Phosphoribosyltransferase GT347_02970 PF03401 Tripartite tricarboxylate transporter family receptor GT347_02975 PF01546 Peptidase family M20/M25/M40 GT347_02975 PF07687 Peptidase dimerisation domain GT347_02985 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain GT347_02985 PF07685 CobB/CobQ-like glutamine amidotransferase domain GT347_03000 PF03186 CobD/Cbib protein GT347_03005 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP GT347_03005 PF12557 Cob(I)alamin adenosyltransferase N terminal GT347_03010 PF00005 ABC transporter GT347_03015 PF01032 FecCD transport family GT347_03020 PF01497 Periplasmic binding protein GT347_03025 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase GT347_03030 PF07685 CobB/CobQ-like glutamine amidotransferase domain GT347_03030 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain GT347_03035 PF00593 TonB dependent receptor GT347_03035 PF07715 TonB-dependent Receptor Plug Domain GT347_03060 PF04073 Aminoacyl-tRNA editing domain GT347_03065 PF02660 Glycerol-3-phosphate acyltransferase GT347_03070 PF00596 Class II Aldolase and Adducin N-terminal domain GT347_03075 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GT347_03080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GT347_03085 PF00528 Binding-protein-dependent transport system inner membrane component GT347_03090 PF00528 Binding-protein-dependent transport system inner membrane component GT347_03090 PF12911 N-terminal TM domain of oligopeptide transport permease C GT347_03095 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GT347_03095 PF00005 ABC transporter GT347_03105 PF00202 Aminotransferase class-III GT347_03110 PF00850 Histone deacetylase domain GT347_03115 PF01546 Peptidase family M20/M25/M40 GT347_03115 PF07687 Peptidase dimerisation domain GT347_03125 PF07729 FCD domain GT347_03125 PF00392 Bacterial regulatory proteins, gntR family GT347_03130 PF00300 Histidine phosphatase superfamily (branch 1) GT347_03130 PF00106 short chain dehydrogenase GT347_03135 PF00850 Histone deacetylase domain GT347_03145 PF00202 Aminotransferase class-III GT347_03155 PF01266 FAD dependent oxidoreductase GT347_03160 PF02702 Osmosensitive K+ channel His kinase sensor domain GT347_03160 PF13492 GAF domain GT347_03160 PF00512 His Kinase A (phospho-acceptor) domain GT347_03160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_03160 PF13493 Domain of unknown function (DUF4118) GT347_03165 PF00486 Transcriptional regulatory protein, C terminal GT347_03165 PF00072 Response regulator receiver domain GT347_03170 PF00672 HAMP domain GT347_03170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GT347_03170 PF02203 Tar ligand binding domain homologue GT347_03190 PF01926 50S ribosome-binding GTPase GT347_03230 PF10518 TAT (twin-arginine translocation) pathway signal sequence GT347_03230 PF00111 2Fe-2S iron-sulfur cluster binding domain GT347_03230 PF01799 [2Fe-2S] binding domain GT347_03235 PF03450 CO dehydrogenase flavoprotein C-terminal domain GT347_03235 PF00941 FAD binding domain in molybdopterin dehydrogenase GT347_03240 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain GT347_03240 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase GT347_03245 PF13406 Transglycosylase SLT domain GT347_03265 PF01594 AI-2E family transporter GT347_03280 PF00581 Rhodanese-like domain GT347_03285 PF00586 AIR synthase related protein, N-terminal domain GT347_03285 PF02769 AIR synthase related protein, C-terminal domain GT347_03295 PF00005 ABC transporter GT347_03300 PF00528 Binding-protein-dependent transport system inner membrane component GT347_03305 PF00528 Binding-protein-dependent transport system inner membrane component GT347_03325 PF00990 Diguanylate cyclase, GGDEF domain GT347_03325 PF01590 GAF domain GT347_03325 PF00563 EAL domain GT347_03325 PF00360 Phytochrome region GT347_03330 PF00486 Transcriptional regulatory protein, C terminal GT347_03330 PF00072 Response regulator receiver domain GT347_03345 PF00899 ThiF family GT347_03355 PF00691 OmpA family GT347_03360 PF04052 TolB amino-terminal domain GT347_03360 PF07676 WD40-like Beta Propeller Repeat GT347_03365 PF00005 ABC transporter GT347_03365 PF00664 ABC transporter transmembrane region GT347_03375 PF00575 S1 RNA binding domain GT347_03375 PF10150 Ribonuclease E/G family GT347_03380 PF02545 Maf-like protein GT347_03385 PF02590 Predicted SPOUT methyltransferase GT347_03400 PF01218 Coproporphyrinogen III oxidase GT347_03410 PF01709 Transcriptional regulator GT347_03415 PF05872 Bacterial protein of unknown function (DUF853) GT347_03425 PF02608 ABC transporter substrate-binding protein PnrA-like GT347_03430 PF01048 Phosphorylase superfamily GT347_03450 PF07969 Amidohydrolase family GT347_03480 PF02472 Biopolymer transport protein ExbD/TolR GT347_03490 PF03928 Haem-degrading GT347_03495 PF01027 Inhibitor of apoptosis-promoting Bax1 GT347_03505 PF05958 tRNA (Uracil-5-)-methyltransferase GT347_03525 PF00175 Oxidoreductase NAD-binding domain GT347_03525 PF00970 Oxidoreductase FAD-binding domain GT347_03525 PF00111 2Fe-2S iron-sulfur cluster binding domain GT347_03530 PF03401 Tripartite tricarboxylate transporter family receptor GT347_03535 PF09339 IclR helix-turn-helix domain GT347_03535 PF01614 Bacterial transcriptional regulator GT347_03540 PF08448 PAS fold GT347_03540 PF00990 Diguanylate cyclase, GGDEF domain GT347_03545 PF00384 Molybdopterin oxidoreductase GT347_03545 PF01568 Molydopterin dinucleotide binding domain GT347_03550 PF01053 Cys/Met metabolism PLP-dependent enzyme GT347_03565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_03565 PF03466 LysR substrate binding domain GT347_03575 PF03401 Tripartite tricarboxylate transporter family receptor GT347_03590 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GT347_03595 PF00294 pfkB family carbohydrate kinase GT347_03600 PF01467 Cytidylyltransferase-like GT347_03615 PF17755 UvrA DNA-binding domain GT347_03635 PF01081 KDPG and KHG aldolase GT347_03640 PF00920 Dehydratase family GT347_03645 PF04752 ChaC-like protein GT347_03650 PF00080 Copper/zinc superoxide dismutase (SODC) GT347_03660 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region GT347_03660 PF01243 Pyridoxamine 5'-phosphate oxidase GT347_03680 PF00593 TonB dependent receptor GT347_03680 PF07715 TonB-dependent Receptor Plug Domain GT347_03690 PF01625 Peptide methionine sulfoxide reductase GT347_03705 PF00534 Glycosyl transferases group 1 GT347_03705 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) GT347_03710 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GT347_03710 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GT347_03710 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GT347_03710 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GT347_03715 PF06029 AlkA N-terminal domain GT347_03715 PF00730 HhH-GPD superfamily base excision DNA repair protein GT347_03715 PF02805 Metal binding domain of Ada GT347_03715 PF12833 Helix-turn-helix domain GT347_03720 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain GT347_03720 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain GT347_03735 PF05973 Phage derived protein Gp49-like (DUF891) GT347_03745 PF00501 AMP-binding enzyme GT347_03745 PF16177 Acetyl-coenzyme A synthetase N-terminus GT347_03745 PF13193 AMP-binding enzyme C-terminal domain GT347_03755 PF07995 Glucose / Sorbosone dehydrogenase GT347_03760 PF00877 NlpC/P60 family GT347_03765 PF07992 Pyridine nucleotide-disulphide oxidoreductase GT347_03765 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GT347_03770 PF00227 Proteasome subunit GT347_03775 PF02817 e3 binding domain GT347_03775 PF00364 Biotin-requiring enzyme GT347_03775 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GT347_03780 PF00456 Transketolase, thiamine diphosphate binding domain GT347_03780 PF17831 Pyruvate dehydrogenase E1 component middle domain GT347_03785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_03785 PF00512 His Kinase A (phospho-acceptor) domain GT347_03785 PF00989 PAS fold GT347_03790 PF00196 Bacterial regulatory proteins, luxR family GT347_03790 PF00072 Response regulator receiver domain GT347_03795 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GT347_03795 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GT347_03810 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) GT347_03815 PF01180 Dihydroorotate dehydrogenase GT347_03820 PF03707 Bacterial signalling protein N terminal repeat GT347_03820 PF00990 Diguanylate cyclase, GGDEF domain GT347_03820 PF00563 EAL domain GT347_03825 PF00210 Ferritin-like domain GT347_03840 PF09345 Domain of unknown function (DUF1987) GT347_03845 PF17151 Periplasmic sensor domain GT347_03845 PF00990 Diguanylate cyclase, GGDEF domain GT347_03850 PF00990 Diguanylate cyclase, GGDEF domain GT347_03850 PF03707 Bacterial signalling protein N terminal repeat GT347_03850 PF00563 EAL domain GT347_03855 PF00392 Bacterial regulatory proteins, gntR family GT347_03855 PF00155 Aminotransferase class I and II GT347_03870 PF17946 RecC C-terminal domain GT347_03875 PF13361 UvrD-like helicase C-terminal domain GT347_03875 PF00580 UvrD/REP helicase N-terminal domain GT347_03875 PF12705 PD-(D/E)XK nuclease superfamily GT347_03880 PF13538 UvrD-like helicase C-terminal domain GT347_03885 PF01381 Helix-turn-helix GT347_03890 PF03466 LysR substrate binding domain GT347_03890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_03895 PF02798 Glutathione S-transferase, N-terminal domain GT347_03900 PF00970 Oxidoreductase FAD-binding domain GT347_03900 PF00042 Globin GT347_03900 PF00175 Oxidoreductase NAD-binding domain GT347_03910 PF00929 Exonuclease GT347_03915 PF00111 2Fe-2S iron-sulfur cluster binding domain GT347_03920 PF00012 Hsp70 protein GT347_03925 PF07743 HSCB C-terminal oligomerisation domain GT347_03930 PF01521 Iron-sulphur cluster biosynthesis GT347_03935 PF01592 NifU-like N terminal domain GT347_03940 PF00266 Aminotransferase class-V GT347_03945 PF02082 Transcriptional regulator GT347_03950 PF17757 UvrB interaction domain GT347_03950 PF04851 Type III restriction enzyme, res subunit GT347_03950 PF02151 UvrB/uvrC motif GT347_03950 PF12344 Ultra-violet resistance protein B GT347_03950 PF00271 Helicase conserved C-terminal domain GT347_03965 PF04060 Putative Fe-S cluster GT347_03975 PF03401 Tripartite tricarboxylate transporter family receptor GT347_03980 PF01575 MaoC like domain GT347_03985 PF02515 CoA-transferase family III GT347_03990 PF02515 CoA-transferase family III GT347_03995 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GT347_03995 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GT347_03995 PF02770 Acyl-CoA dehydrogenase, middle domain GT347_04000 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain GT347_04000 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain GT347_04005 PF03328 HpcH/HpaI aldolase/citrate lyase family GT347_04010 PF03401 Tripartite tricarboxylate transporter family receptor GT347_04015 PF04299 Putative FMN-binding domain GT347_04020 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GT347_04025 PF03401 Tripartite tricarboxylate transporter family receptor GT347_04030 PF01425 Amidase GT347_04035 PF09339 IclR helix-turn-helix domain GT347_04035 PF01614 Bacterial transcriptional regulator GT347_04040 PF01614 Bacterial transcriptional regulator GT347_04040 PF09339 IclR helix-turn-helix domain GT347_04045 PF07690 Major Facilitator Superfamily GT347_04065 PF04542 Sigma-70 region 2 GT347_04065 PF08281 Sigma-70, region 4 GT347_04085 PF01207 Dihydrouridine synthase (Dus) GT347_04105 PF00999 Sodium/hydrogen exchanger family GT347_04105 PF02254 TrkA-N domain GT347_04110 PF00106 short chain dehydrogenase GT347_04115 PF00108 Thiolase, N-terminal domain GT347_04115 PF02803 Thiolase, C-terminal domain GT347_04120 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus GT347_04140 PF01557 Fumarylacetoacetate (FAA) hydrolase family GT347_04150 PF08479 POTRA domain, ShlB-type GT347_04150 PF17287 POTRA domain GT347_04150 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB GT347_04190 PF02798 Glutathione S-transferase, N-terminal domain GT347_04190 PF00043 Glutathione S-transferase, C-terminal domain GT347_04195 PF00248 Aldo/keto reductase family GT347_04200 PF00180 Isocitrate/isopropylmalate dehydrogenase GT347_04215 PF09423 PhoD-like phosphatase GT347_04215 PF16655 PhoD-like phosphatase, N-terminal domain GT347_04220 PF02777 Iron/manganese superoxide dismutases, C-terminal domain GT347_04220 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain GT347_04225 PF13742 OB-fold nucleic acid binding domain GT347_04225 PF02601 Exonuclease VII, large subunit GT347_04230 PF01618 MotA/TolQ/ExbB proton channel family GT347_04235 PF02472 Biopolymer transport protein ExbD/TolR GT347_04240 PF02606 Tetraacyldisaccharide-1-P 4'-kinase GT347_04245 PF03966 Trm112p-like protein GT347_04250 PF02348 Cytidylyltransferase GT347_04275 PF05191 Adenylate kinase, active site lid GT347_04280 PF00710 Asparaginase, N-terminal GT347_04280 PF17763 Glutaminase/Asparaginase C-terminal domain GT347_04285 PF00717 Peptidase S24-like GT347_04285 PF01726 LexA DNA binding domain GT347_04295 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GT347_04295 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GT347_04305 PF00378 Enoyl-CoA hydratase/isomerase GT347_04325 PF08497 Radical SAM N-terminal GT347_04325 PF04055 Radical SAM superfamily GT347_04325 PF11842 Domain of unknown function (DUF3362) GT347_04355 PF00248 Aldo/keto reductase family GT347_04365 PF01841 Transglutaminase-like superfamily GT347_04365 PF08379 Bacterial transglutaminase-like N-terminal region GT347_04370 PF14403 Circularly permuted ATP-grasp type 2 GT347_04370 PF04168 A predicted alpha-helical domain with a conserved ER motif. GT347_04385 PF00753 Metallo-beta-lactamase superfamily GT347_04385 PF03772 Competence protein GT347_04390 PF14403 Circularly permuted ATP-grasp type 2 GT347_04400 PF00563 EAL domain GT347_04400 PF00990 Diguanylate cyclase, GGDEF domain GT347_04400 PF03707 Bacterial signalling protein N terminal repeat GT347_04410 PF00521 DNA gyrase/topoisomerase IV, subunit A GT347_04415 PF01464 Transglycosylase SLT domain GT347_04420 PF00204 DNA gyrase B GT347_04420 PF00986 DNA gyrase B subunit, carboxyl terminus GT347_04420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_04420 PF01751 Toprim domain GT347_04430 PF00701 Dihydrodipicolinate synthetase family GT347_04435 PF06804 NlpB/DapX lipoprotein GT347_04440 PF00753 Metallo-beta-lactamase superfamily GT347_04450 PF08007 Cupin superfamily protein GT347_04455 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GT347_04465 PF00692 dUTPase GT347_04470 PF04127 DNA / pantothenate metabolism flavoprotein GT347_04470 PF02441 Flavoprotein GT347_04475 PF00117 Glutamine amidotransferase class-I GT347_04475 PF06418 CTP synthase N-terminus GT347_04480 PF00793 DAHP synthetase I family GT347_04490 PF03952 Enolase, N-terminal domain GT347_04490 PF00113 Enolase, C-terminal TIM barrel domain GT347_04495 PF04977 Septum formation initiator GT347_04520 PF01430 Hsp33 protein GT347_04525 PF00132 Bacterial transferase hexapeptide (six repeats) GT347_04530 PF04305 Protein of unknown function (DUF455) GT347_04540 PF00563 EAL domain GT347_04540 PF08668 HDOD domain GT347_04565 PF02899 Phage integrase, N-terminal SAM-like domain GT347_04565 PF00589 Phage integrase family GT347_04570 PF03401 Tripartite tricarboxylate transporter family receptor GT347_04580 PF08331 Domain of unknown function (DUF1730) GT347_04585 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE GT347_04590 PF01520 N-acetylmuramoyl-L-alanine amidase GT347_04590 PF11741 AMIN domain GT347_04600 PF09335 SNARE associated Golgi protein GT347_04605 PF08676 MutL C terminal dimerisation domain GT347_04605 PF01119 DNA mismatch repair protein, C-terminal domain GT347_04610 PF12146 Serine aminopeptidase, S33 GT347_04620 PF00005 ABC transporter GT347_04640 PF02653 Branched-chain amino acid transport system / permease component GT347_04650 PF00005 ABC transporter GT347_04655 PF00005 ABC transporter GT347_04655 PF12399 Branched-chain amino acid ATP-binding cassette transporter GT347_04660 PF05532 CsbD-like GT347_04670 PF03781 Sulfatase-modifying factor enzyme 1 GT347_04670 PF12867 DinB superfamily GT347_04675 PF10017 Histidine-specific methyltransferase, SAM-dependent GT347_04720 PF02705 K+ potassium transporter GT347_04745 PF10431 C-terminal, D2-small domain, of ClpB protein GT347_04745 PF02861 Clp amino terminal domain, pathogenicity island component GT347_04745 PF07724 AAA domain (Cdc48 subfamily) GT347_04745 PF00004 ATPase family associated with various cellular activities (AAA) GT347_04745 PF17871 AAA lid domain GT347_04765 PF07859 alpha/beta hydrolase fold GT347_04775 PF00534 Glycosyl transferases group 1 GT347_04775 PF08323 Starch synthase catalytic domain GT347_04780 PF02446 4-alpha-glucanotransferase GT347_04785 PF11941 Domain of unknown function (DUF3459) GT347_04785 PF00128 Alpha amylase, catalytic domain GT347_04790 PF00128 Alpha amylase, catalytic domain GT347_04790 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) GT347_04795 PF00483 Nucleotidyl transferase GT347_04800 PF00128 Alpha amylase, catalytic domain GT347_04800 PF02806 Alpha amylase, C-terminal all-beta domain GT347_04800 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) GT347_04805 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) GT347_04810 PF01743 Poly A polymerase head domain GT347_04810 PF12627 Probable RNA and SrmB- binding site of polymerase A GT347_04810 PF12626 Polymerase A arginine-rich C-terminus GT347_04820 PF00308 Bacterial dnaA protein GT347_04825 PF13369 Transglutaminase-like superfamily GT347_04830 PF03023 Lipid II flippase MurJ GT347_04835 PF01649 Ribosomal protein S20 GT347_04850 PF00202 Aminotransferase class-III GT347_04855 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GT347_04855 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GT347_04860 PF00990 Diguanylate cyclase, GGDEF domain GT347_04860 PF00563 EAL domain GT347_04860 PF13426 PAS domain GT347_04870 PF00486 Transcriptional regulatory protein, C terminal GT347_04890 PF00510 Cytochrome c oxidase subunit III GT347_04900 PF00116 Cytochrome C oxidase subunit II, periplasmic domain GT347_04935 PF00037 4Fe-4S binding domain GT347_04935 PF13247 4Fe-4S dicluster domain GT347_04960 PF01433 Peptidase family M1 domain GT347_04960 PF11940 Domain of unknown function (DUF3458) Ig-like fold GT347_04960 PF17432 Domain of unknown function (DUF3458_C) ARM repeats GT347_04965 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain GT347_05030 PF02472 Biopolymer transport protein ExbD/TolR GT347_05035 PF01618 MotA/TolQ/ExbB proton channel family GT347_05080 PF01223 DNA/RNA non-specific endonuclease GT347_05085 PF00107 Zinc-binding dehydrogenase GT347_05085 PF08240 Alcohol dehydrogenase GroES-like domain GT347_05090 PF03466 LysR substrate binding domain GT347_05090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_05095 PF07690 Major Facilitator Superfamily GT347_05100 PF00440 Bacterial regulatory proteins, tetR family GT347_05110 PF01370 NAD dependent epimerase/dehydratase family GT347_05115 PF00155 Aminotransferase class I and II GT347_05120 PF03401 Tripartite tricarboxylate transporter family receptor GT347_05125 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GT347_05125 PF13378 Enolase C-terminal domain-like GT347_05130 PF03466 LysR substrate binding domain GT347_05130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_05135 PF02308 MgtC family GT347_05140 PF04244 Deoxyribodipyrimidine photo-lyase-related protein GT347_05145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_05145 PF03466 LysR substrate binding domain GT347_05150 PF00330 Aconitase family (aconitate hydratase) GT347_05155 PF03401 Tripartite tricarboxylate transporter family receptor GT347_05165 PF01556 DnaJ C terminal domain GT347_05165 PF00684 DnaJ central domain GT347_05165 PF00226 DnaJ domain GT347_05220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_05220 PF03466 LysR substrate binding domain GT347_05230 PF10605 3HB-oligomer hydrolase (3HBOH) GT347_05235 PF00732 GMC oxidoreductase GT347_05235 PF05199 GMC oxidoreductase GT347_05240 PF00561 alpha/beta hydrolase fold GT347_05245 PF00512 His Kinase A (phospho-acceptor) domain GT347_05245 PF09456 RcsC Alpha-Beta-Loop (ABL) GT347_05245 PF00072 Response regulator receiver domain GT347_05245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_05260 PF02743 Cache domain GT347_05260 PF00672 HAMP domain GT347_05260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GT347_05265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_05265 PF01584 CheW-like domain GT347_05265 PF01627 Hpt domain GT347_05265 PF02895 Signal transducing histidine kinase, homodimeric domain GT347_05270 PF01266 FAD dependent oxidoreductase GT347_05275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_05275 PF03466 LysR substrate binding domain GT347_05285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_05285 PF03466 LysR substrate binding domain GT347_05290 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GT347_05290 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GT347_05295 PF03401 Tripartite tricarboxylate transporter family receptor GT347_05300 PF00171 Aldehyde dehydrogenase family GT347_05305 PF01613 Flavin reductase like domain GT347_05310 PF00296 Luciferase-like monooxygenase GT347_05325 PF03401 Tripartite tricarboxylate transporter family receptor GT347_05330 PF03972 MmgE/PrpD family GT347_05335 PF03466 LysR substrate binding domain GT347_05335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_05350 PF00528 Binding-protein-dependent transport system inner membrane component GT347_05360 PF01266 FAD dependent oxidoreductase GT347_05370 PF02653 Branched-chain amino acid transport system / permease component GT347_05380 PF00005 ABC transporter GT347_05380 PF12399 Branched-chain amino acid ATP-binding cassette transporter GT347_05385 PF00005 ABC transporter GT347_05395 PF09339 IclR helix-turn-helix domain GT347_05395 PF01614 Bacterial transcriptional regulator GT347_05400 PF02515 CoA-transferase family III GT347_05405 PF03328 HpcH/HpaI aldolase/citrate lyase family GT347_05410 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain GT347_05410 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain GT347_05415 PF00378 Enoyl-CoA hydratase/isomerase GT347_05420 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GT347_05420 PF02770 Acyl-CoA dehydrogenase, middle domain GT347_05420 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GT347_05425 PF03401 Tripartite tricarboxylate transporter family receptor GT347_05430 PF13193 AMP-binding enzyme C-terminal domain GT347_05430 PF00501 AMP-binding enzyme GT347_05435 PF00392 Bacterial regulatory proteins, gntR family GT347_05435 PF07702 UTRA domain GT347_05445 PF03401 Tripartite tricarboxylate transporter family receptor GT347_05460 PF01494 FAD binding domain GT347_05465 PF00106 short chain dehydrogenase GT347_05475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_05475 PF03466 LysR substrate binding domain GT347_05490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_05490 PF03466 LysR substrate binding domain GT347_05495 PF01965 DJ-1/PfpI family GT347_05495 PF12833 Helix-turn-helix domain GT347_05510 PF03466 LysR substrate binding domain GT347_05510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_05515 PF00378 Enoyl-CoA hydratase/isomerase GT347_05520 PF00578 AhpC/TSA family GT347_05525 PF00893 Small Multidrug Resistance protein GT347_05530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_05530 PF03466 LysR substrate binding domain GT347_05535 PF01979 Amidohydrolase family GT347_05540 PF01522 Polysaccharide deacetylase GT347_05545 PF00497 Bacterial extracellular solute-binding proteins, family 3 GT347_05550 PF00005 ABC transporter GT347_05555 PF00528 Binding-protein-dependent transport system inner membrane component GT347_05560 PF00795 Carbon-nitrogen hydrolase GT347_05565 PF00072 Response regulator receiver domain GT347_05565 PF01339 CheB methylesterase GT347_05570 PF03975 CheD chemotactic sensory transduction GT347_05575 PF01739 CheR methyltransferase, SAM binding domain GT347_05575 PF03705 CheR methyltransferase, all-alpha domain GT347_05580 PF01584 CheW-like domain GT347_05585 PF02203 Tar ligand binding domain homologue GT347_05585 PF00672 HAMP domain GT347_05585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GT347_05590 PF01627 Hpt domain GT347_05590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_05590 PF02895 Signal transducing histidine kinase, homodimeric domain GT347_05590 PF09078 CheY binding GT347_05590 PF01584 CheW-like domain GT347_05600 PF00072 Response regulator receiver domain GT347_05605 PF17200 Single Cache domain 2 GT347_05605 PF00672 HAMP domain GT347_05605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GT347_05610 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term GT347_05610 PF12833 Helix-turn-helix domain GT347_05615 PF07690 Major Facilitator Superfamily GT347_05620 PF03466 LysR substrate binding domain GT347_05620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_05625 PF01272 Transcription elongation factor, GreA/GreB, C-term GT347_05625 PF03449 Transcription elongation factor, N-terminal GT347_05635 PF05199 GMC oxidoreductase GT347_05635 PF00732 GMC oxidoreductase GT347_05670 PF03401 Tripartite tricarboxylate transporter family receptor GT347_05675 PF00582 Universal stress protein family GT347_05680 PF02129 X-Pro dipeptidyl-peptidase (S15 family) GT347_05680 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain GT347_05685 PF03401 Tripartite tricarboxylate transporter family receptor GT347_05690 PF01176 Translation initiation factor 1A / IF-1 GT347_05695 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) GT347_05700 PF00158 Sigma-54 interaction domain GT347_05700 PF13426 PAS domain GT347_05700 PF02954 Bacterial regulatory protein, Fis family GT347_05705 PF00118 TCP-1/cpn60 chaperonin family GT347_05720 PF02406 MmoB/DmpM family GT347_05725 PF02332 Methane/Phenol/Toluene Hydroxylase GT347_05730 PF00175 Oxidoreductase NAD-binding domain GT347_05730 PF00111 2Fe-2S iron-sulfur cluster binding domain GT347_05730 PF00970 Oxidoreductase FAD-binding domain GT347_05735 PF02332 Methane/Phenol/Toluene Hydroxylase GT347_05745 PF00107 Zinc-binding dehydrogenase GT347_05745 PF08240 Alcohol dehydrogenase GroES-like domain GT347_05760 PF03401 Tripartite tricarboxylate transporter family receptor GT347_05770 PF00512 His Kinase A (phospho-acceptor) domain GT347_05770 PF08448 PAS fold GT347_05770 PF13426 PAS domain GT347_05770 PF00072 Response regulator receiver domain GT347_05770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_05780 PF00557 Metallopeptidase family M24 GT347_05785 PF03401 Tripartite tricarboxylate transporter family receptor GT347_05795 PF03401 Tripartite tricarboxylate transporter family receptor GT347_05800 PF02627 Carboxymuconolactone decarboxylase family GT347_05805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_05805 PF03466 LysR substrate binding domain GT347_05815 PF00072 Response regulator receiver domain GT347_05815 PF13188 PAS domain GT347_05815 PF08448 PAS fold GT347_05815 PF00512 His Kinase A (phospho-acceptor) domain GT347_05815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_05820 PF05247 Flagellar transcriptional activator (FlhD) GT347_05825 PF05280 Flagellar transcriptional activator (FlhC) GT347_05835 PF00849 RNA pseudouridylate synthase GT347_05840 PF01370 NAD dependent epimerase/dehydratase family GT347_05845 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GT347_05855 PF03480 Bacterial extracellular solute-binding protein, family 7 GT347_05860 PF07729 FCD domain GT347_05860 PF00392 Bacterial regulatory proteins, gntR family GT347_05885 PF00384 Molybdopterin oxidoreductase GT347_05885 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GT347_05885 PF01568 Molydopterin dinucleotide binding domain GT347_05895 PF00512 His Kinase A (phospho-acceptor) domain GT347_05895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_05895 PF08521 Two-component sensor kinase N-terminal GT347_05900 PF00486 Transcriptional regulatory protein, C terminal GT347_05900 PF00072 Response regulator receiver domain GT347_05910 PF07690 Major Facilitator Superfamily GT347_05915 PF02515 CoA-transferase family III GT347_05925 PF05567 Neisseria PilC beta-propeller domain GT347_05940 PF03401 Tripartite tricarboxylate transporter family receptor GT347_05945 PF00330 Aconitase family (aconitate hydratase) GT347_05950 PF00694 Aconitase C-terminal domain GT347_05960 PF00392 Bacterial regulatory proteins, gntR family GT347_05960 PF07702 UTRA domain GT347_06000 PF00857 Isochorismatase family GT347_06010 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GT347_06015 PF01425 Amidase GT347_06020 PF05247 Flagellar transcriptional activator (FlhD) GT347_06055 PF02371 Transposase IS116/IS110/IS902 family GT347_06055 PF01548 Transposase GT347_06065 PF00005 ABC transporter GT347_06070 PF02687 FtsX-like permease family GT347_06070 PF12704 MacB-like periplasmic core domain GT347_06095 PF02272 DHHA1 domain GT347_06095 PF17768 RecJ OB domain GT347_06095 PF01368 DHH family GT347_06105 PF02811 PHP domain GT347_06115 PF01300 Telomere recombination GT347_06120 PF02163 Peptidase family M50 GT347_06125 PF00579 tRNA synthetases class I (W and Y) GT347_06140 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GT347_06140 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GT347_06155 PF12833 Helix-turn-helix domain GT347_06155 PF02311 AraC-like ligand binding domain GT347_06160 PF03401 Tripartite tricarboxylate transporter family receptor GT347_06170 PF02652 L-lactate permease GT347_06180 PF01425 Amidase GT347_06185 PF03466 LysR substrate binding domain GT347_06185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_06210 PF01842 ACT domain GT347_06210 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GT347_06210 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GT347_06220 PF01928 CYTH domain GT347_06240 PF00849 RNA pseudouridylate synthase GT347_06295 PF00270 DEAD/DEAH box helicase GT347_06295 PF00271 Helicase conserved C-terminal domain GT347_06295 PF00570 HRDC domain GT347_06295 PF16124 RecQ zinc-binding GT347_06295 PF09382 RQC domain GT347_06310 PF00111 2Fe-2S iron-sulfur cluster binding domain GT347_06315 PF00120 Glutamine synthetase, catalytic domain GT347_06320 PF00355 Rieske [2Fe-2S] domain GT347_06325 PF00106 short chain dehydrogenase GT347_06330 PF05721 Phytanoyl-CoA dioxygenase (PhyH) GT347_06335 PF07286 Protein of unknown function (DUF1445) GT347_06345 PF02472 Biopolymer transport protein ExbD/TolR GT347_06350 PF01618 MotA/TolQ/ExbB proton channel family GT347_06370 PF00171 Aldehyde dehydrogenase family GT347_06375 PF01053 Cys/Met metabolism PLP-dependent enzyme GT347_06380 PF00106 short chain dehydrogenase GT347_06385 PF00528 Binding-protein-dependent transport system inner membrane component GT347_06390 PF00528 Binding-protein-dependent transport system inner membrane component GT347_06395 PF00005 ABC transporter GT347_06410 PF05378 Hydantoinase/oxoprolinase N-terminal region GT347_06410 PF01968 Hydantoinase/oxoprolinase GT347_06415 PF02538 Hydantoinase B/oxoprolinase GT347_06420 PF03741 Integral membrane protein TerC family GT347_06420 PF03471 Transporter associated domain GT347_06430 PF03814 Potassium-transporting ATPase A subunit GT347_06440 PF02669 K+-transporting ATPase, c chain GT347_06445 PF03401 Tripartite tricarboxylate transporter family receptor GT347_06450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_06450 PF03466 LysR substrate binding domain GT347_06455 PF13360 PQQ-like domain GT347_06455 PF01011 PQQ enzyme repeat GT347_06465 PF00884 Sulfatase GT347_06470 PF03401 Tripartite tricarboxylate transporter family receptor GT347_06475 PF00512 His Kinase A (phospho-acceptor) domain GT347_06475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_06475 PF00672 HAMP domain GT347_06480 PF00072 Response regulator receiver domain GT347_06480 PF00486 Transcriptional regulatory protein, C terminal GT347_06505 PF00005 ABC transporter GT347_06505 PF00664 ABC transporter transmembrane region GT347_06515 PF02469 Fasciclin domain GT347_06520 PF12833 Helix-turn-helix domain GT347_06520 PF02311 AraC-like ligand binding domain GT347_06525 PF07690 Major Facilitator Superfamily GT347_06530 PF08446 PAS fold GT347_06530 PF01590 GAF domain GT347_06530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_06530 PF00360 Phytochrome region GT347_06530 PF00512 His Kinase A (phospho-acceptor) domain GT347_06550 PF00004 ATPase family associated with various cellular activities (AAA) GT347_06550 PF17862 AAA+ lid domain GT347_06550 PF06480 FtsH Extracellular GT347_06550 PF01434 Peptidase family M41 GT347_06560 PF04542 Sigma-70 region 2 GT347_06560 PF04545 Sigma-70, region 4 GT347_06570 PF00360 Phytochrome region GT347_06570 PF00990 Diguanylate cyclase, GGDEF domain GT347_06570 PF01590 GAF domain GT347_06570 PF00563 EAL domain GT347_06575 PF03466 LysR substrate binding domain GT347_06575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_06580 PF02538 Hydantoinase B/oxoprolinase GT347_06585 PF01968 Hydantoinase/oxoprolinase GT347_06585 PF05378 Hydantoinase/oxoprolinase N-terminal region GT347_06590 PF03401 Tripartite tricarboxylate transporter family receptor GT347_06595 PF00378 Enoyl-CoA hydratase/isomerase GT347_06600 PF02515 CoA-transferase family III GT347_06605 PF04102 SlyX GT347_06610 PF06039 Malate:quinone oxidoreductase (Mqo) GT347_06615 PF00107 Zinc-binding dehydrogenase GT347_06615 PF08240 Alcohol dehydrogenase GroES-like domain GT347_06620 PF01614 Bacterial transcriptional regulator GT347_06620 PF09339 IclR helix-turn-helix domain GT347_06625 PF03575 Peptidase family S51 GT347_06640 PF03401 Tripartite tricarboxylate transporter family receptor GT347_06645 PF00356 Bacterial regulatory proteins, lacI family GT347_06650 PF08450 SMP-30/Gluconolactonase/LRE-like region GT347_06655 PF03480 Bacterial extracellular solute-binding protein, family 7 GT347_06680 PF01709 Transcriptional regulator GT347_06685 PF00672 HAMP domain GT347_06685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GT347_06685 PF02203 Tar ligand binding domain homologue GT347_06700 PF07690 Major Facilitator Superfamily GT347_06710 PF00440 Bacterial regulatory proteins, tetR family GT347_06715 PF17785 PUA-like domain GT347_06715 PF10672 S-adenosylmethionine-dependent methyltransferase GT347_06725 PF02040 Arsenical pump membrane protein GT347_06730 PF03960 ArsC family GT347_06740 PF05199 GMC oxidoreductase GT347_06740 PF00732 GMC oxidoreductase GT347_06745 PF00034 Cytochrome c GT347_06745 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GT347_06765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_06765 PF03466 LysR substrate binding domain GT347_06770 PF03401 Tripartite tricarboxylate transporter family receptor GT347_06780 PF13280 WYL domain GT347_06780 PF08279 HTH domain GT347_06800 PF13419 Haloacid dehalogenase-like hydrolase GT347_06810 PF13378 Enolase C-terminal domain-like GT347_06810 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GT347_06840 PF03401 Tripartite tricarboxylate transporter family receptor GT347_06845 PF03401 Tripartite tricarboxylate transporter family receptor GT347_06855 PF00202 Aminotransferase class-III GT347_06860 PF03466 LysR substrate binding domain GT347_06860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_06865 PF02463 RecF/RecN/SMC N terminal domain GT347_06875 PF14602 Hexapeptide repeat of succinyl-transferase GT347_06875 PF12464 Maltose acetyltransferase GT347_06895 PF01965 DJ-1/PfpI family GT347_06915 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GT347_06915 PF00005 ABC transporter GT347_06920 PF00528 Binding-protein-dependent transport system inner membrane component GT347_06925 PF00528 Binding-protein-dependent transport system inner membrane component GT347_06930 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GT347_06935 PF01979 Amidohydrolase family GT347_06945 PF01958 Domain of unknown function DUF108 GT347_06945 PF03447 Homoserine dehydrogenase, NAD binding domain GT347_06950 PF03466 LysR substrate binding domain GT347_06950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_06955 PF03401 Tripartite tricarboxylate transporter family receptor GT347_06960 PF00106 short chain dehydrogenase GT347_06970 PF00990 Diguanylate cyclase, GGDEF domain GT347_06970 PF03707 Bacterial signalling protein N terminal repeat GT347_06970 PF00563 EAL domain GT347_06975 PF07478 D-ala D-ala ligase C-terminus GT347_06975 PF01820 D-ala D-ala ligase N-terminus GT347_06980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_06980 PF03466 LysR substrate binding domain GT347_06985 PF01554 MatE GT347_07005 PF04403 Paraquat-inducible protein A GT347_07010 PF04403 Paraquat-inducible protein A GT347_07015 PF02470 MlaD protein GT347_07035 PF00528 Binding-protein-dependent transport system inner membrane component GT347_07040 PF00528 Binding-protein-dependent transport system inner membrane component GT347_07045 PF00005 ABC transporter GT347_07050 PF00296 Luciferase-like monooxygenase GT347_07055 PF03459 TOBE domain GT347_07060 PF00665 Integrase core domain GT347_07080 PF03466 LysR substrate binding domain GT347_07080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_07095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_07095 PF03466 LysR substrate binding domain GT347_07105 PF01979 Amidohydrolase family GT347_07120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_07120 PF03466 LysR substrate binding domain GT347_07130 PF07690 Major Facilitator Superfamily GT347_07135 PF10503 Esterase PHB depolymerase GT347_07155 PF14031 Putative serine dehydratase domain GT347_07155 PF01168 Alanine racemase, N-terminal domain GT347_07160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_07160 PF03466 LysR substrate binding domain GT347_07165 PF12706 Beta-lactamase superfamily domain GT347_07180 PF00392 Bacterial regulatory proteins, gntR family GT347_07180 PF07729 FCD domain GT347_07185 PF03786 D-mannonate dehydratase (UxuA) GT347_07190 PF03401 Tripartite tricarboxylate transporter family receptor GT347_07200 PF01425 Amidase GT347_07210 PF01979 Amidohydrolase family GT347_07215 PF00528 Binding-protein-dependent transport system inner membrane component GT347_07225 PF00005 ABC transporter GT347_07225 PF08402 TOBE domain GT347_07235 PF01979 Amidohydrolase family GT347_07245 PF13416 Bacterial extracellular solute-binding protein GT347_07250 PF01979 Amidohydrolase family GT347_07255 PF00005 ABC transporter GT347_07255 PF08402 TOBE domain GT347_07260 PF00528 Binding-protein-dependent transport system inner membrane component GT347_07265 PF00528 Binding-protein-dependent transport system inner membrane component GT347_07275 PF02742 Iron dependent repressor, metal binding and dimerisation domain GT347_07275 PF01325 Iron dependent repressor, N-terminal DNA binding domain GT347_07280 PF00356 Bacterial regulatory proteins, lacI family GT347_07285 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GT347_07285 PF00005 ABC transporter GT347_07295 PF00528 Binding-protein-dependent transport system inner membrane component GT347_07300 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GT347_07315 PF04055 Radical SAM superfamily GT347_07315 PF06969 HemN C-terminal domain GT347_07320 PF01725 Ham1 family GT347_07325 PF03725 3' exoribonuclease family, domain 2 GT347_07325 PF01138 3' exoribonuclease family, domain 1 GT347_07335 PF00069 Protein kinase domain GT347_07335 PF03793 PASTA domain GT347_07340 PF03755 YicC-like family, N-terminal region GT347_07340 PF08340 Domain of unknown function (DUF1732) GT347_07345 PF00625 Guanylate kinase GT347_07350 PF01192 RNA polymerase Rpb6 GT347_07355 PF04607 Region found in RelA / SpoT proteins GT347_07355 PF02824 TGS domain GT347_07355 PF13291 ACT domain GT347_07360 PF03449 Transcription elongation factor, N-terminal GT347_07360 PF01272 Transcription elongation factor, GreA/GreB, C-term GT347_07365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_07365 PF13188 PAS domain GT347_07365 PF00512 His Kinase A (phospho-acceptor) domain GT347_07365 PF00072 Response regulator receiver domain GT347_07365 PF08448 PAS fold GT347_07370 PF00300 Histidine phosphatase superfamily (branch 1) GT347_07385 PF01227 GTP cyclohydrolase I GT347_07390 PF00072 Response regulator receiver domain GT347_07410 PF00293 NUDIX domain GT347_07415 PF02938 GAD domain GT347_07415 PF00152 tRNA synthetases class II (D, K and N) GT347_07415 PF01336 OB-fold nucleic acid binding domain GT347_07435 PF03109 ABC1 family GT347_07450 PF01209 ubiE/COQ5 methyltransferase family GT347_07470 PF03401 Tripartite tricarboxylate transporter family receptor GT347_07475 PF02515 CoA-transferase family III GT347_07480 PF00682 HMGL-like GT347_07485 PF07702 UTRA domain GT347_07485 PF00392 Bacterial regulatory proteins, gntR family GT347_07490 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GT347_07490 PF12806 Acetyl-CoA dehydrogenase C-terminal like GT347_07490 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GT347_07490 PF02770 Acyl-CoA dehydrogenase, middle domain GT347_07500 PF08245 Mur ligase middle domain GT347_07500 PF02875 Mur ligase family, glutamate ligase domain GT347_07500 PF08443 RimK-like ATP-grasp domain GT347_07505 PF02875 Mur ligase family, glutamate ligase domain GT347_07505 PF08443 RimK-like ATP-grasp domain GT347_07505 PF08245 Mur ligase middle domain GT347_07510 PF00664 ABC transporter transmembrane region GT347_07510 PF00005 ABC transporter GT347_07520 PF06508 Queuosine biosynthesis protein QueC GT347_07525 PF17149 Periplasmic sensor domain found in signal transduction proteins GT347_07525 PF00072 Response regulator receiver domain GT347_07525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_07525 PF00512 His Kinase A (phospho-acceptor) domain GT347_07525 PF01627 Hpt domain GT347_07525 PF00672 HAMP domain GT347_07530 PF00072 Response regulator receiver domain GT347_07550 PF00482 Type II secretion system (T2SS), protein F GT347_07555 PF00296 Luciferase-like monooxygenase GT347_07560 PF01242 6-pyruvoyl tetrahydropterin synthase GT347_07570 PF00005 ABC transporter GT347_07570 PF08402 TOBE domain GT347_07580 PF00528 Binding-protein-dependent transport system inner membrane component GT347_07585 PF00528 Binding-protein-dependent transport system inner membrane component GT347_07600 PF00072 Response regulator receiver domain GT347_07600 PF09308 LuxQ, periplasmic GT347_07600 PF00512 His Kinase A (phospho-acceptor) domain GT347_07600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_07605 PF02021 Uncharacterised protein family UPF0102 GT347_07610 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GT347_07615 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GT347_07620 PF12704 MacB-like periplasmic core domain GT347_07620 PF02687 FtsX-like permease family GT347_07620 PF00005 ABC transporter GT347_07625 PF02321 Outer membrane efflux protein GT347_07640 PF01208 Uroporphyrinogen decarboxylase (URO-D) GT347_07645 PF00270 DEAD/DEAH box helicase GT347_07645 PF00271 Helicase conserved C-terminal domain GT347_07645 PF17764 3′ DNA-binding domain (3′BD) GT347_07645 PF18074 Primosomal protein N C-terminal domain GT347_07645 PF18319 PriA DNA helicase Cys-rich region (CRR) domain GT347_07655 PF00512 His Kinase A (phospho-acceptor) domain GT347_07655 PF08521 Two-component sensor kinase N-terminal GT347_07655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_07660 PF00072 Response regulator receiver domain GT347_07660 PF00486 Transcriptional regulatory protein, C terminal GT347_07665 PF08019 Phosphoethanolamine transferase EptA/EptB GT347_07665 PF00884 Sulfatase GT347_07680 PF05981 CreA protein GT347_07685 PF00753 Metallo-beta-lactamase superfamily GT347_07685 PF16123 Hydroxyacylglutathione hydrolase C-terminus GT347_07690 PF00849 RNA pseudouridylate synthase GT347_07690 PF01479 S4 domain GT347_07725 PF01435 Peptidase family M48 GT347_07735 PF01979 Amidohydrolase family GT347_07745 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GT347_07750 PF03480 Bacterial extracellular solute-binding protein, family 7 GT347_07770 PF00005 ABC transporter GT347_07775 PF00528 Binding-protein-dependent transport system inner membrane component GT347_07780 PF00528 Binding-protein-dependent transport system inner membrane component GT347_07785 PF00497 Bacterial extracellular solute-binding proteins, family 3 GT347_07790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_07790 PF03466 LysR substrate binding domain GT347_07795 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GT347_07795 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GT347_07800 PF00664 ABC transporter transmembrane region GT347_07800 PF00005 ABC transporter GT347_07805 PF03061 Thioesterase superfamily GT347_07810 PF00378 Enoyl-CoA hydratase/isomerase GT347_07820 PF00440 Bacterial regulatory proteins, tetR family GT347_07825 PF00696 Amino acid kinase family GT347_07830 PF00953 Glycosyl transferase family 4 GT347_07840 PF00535 Glycosyl transferase family 2 GT347_07865 PF00535 Glycosyl transferase family 2 GT347_07880 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family GT347_07885 PF00005 ABC transporter GT347_07885 PF14524 Wzt C-terminal domain GT347_07895 PF03309 Type III pantothenate kinase GT347_07930 PF13091 PLD-like domain GT347_07935 PF00072 Response regulator receiver domain GT347_07935 PF01339 CheB methylesterase GT347_07940 PF03975 CheD chemotactic sensory transduction GT347_07945 PF01739 CheR methyltransferase, SAM binding domain GT347_07945 PF03705 CheR methyltransferase, all-alpha domain GT347_07950 PF01584 CheW-like domain GT347_07955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_07955 PF01627 Hpt domain GT347_07955 PF01584 CheW-like domain GT347_07955 PF09078 CheY binding GT347_07955 PF02895 Signal transducing histidine kinase, homodimeric domain GT347_07960 PF00072 Response regulator receiver domain GT347_07960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_07970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_07970 PF07730 Histidine kinase GT347_07970 PF05231 MASE1 GT347_07975 PF00196 Bacterial regulatory proteins, luxR family GT347_07975 PF00072 Response regulator receiver domain GT347_07980 PF01311 Bacterial export proteins, family 1 GT347_07985 PF01313 Bacterial export proteins, family 3 GT347_07990 PF00813 FliP family GT347_08000 PF16973 Flagellar motor switch protein FliN N-terminal GT347_08000 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GT347_08005 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GT347_08005 PF02154 Flagellar motor switch protein FliM GT347_08025 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GT347_08025 PF18269 T3SS EscN ATPase C-terminal domain GT347_08035 PF01706 FliG C-terminal domain GT347_08035 PF14841 FliG middle domain GT347_08035 PF14842 FliG N-terminal domain GT347_08040 PF01514 Secretory protein of YscJ/FliF family GT347_08040 PF08345 Flagellar M-ring protein C-terminal GT347_08060 PF02465 Flagellar hook-associated protein 2 N-terminus GT347_08060 PF07195 Flagellar hook-associated protein 2 C-terminus GT347_08065 PF00700 Bacterial flagellin C-terminal helical region GT347_08065 PF00669 Bacterial flagellin N-terminal helical region GT347_08070 PF00700 Bacterial flagellin C-terminal helical region GT347_08070 PF00669 Bacterial flagellin N-terminal helical region GT347_08080 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal GT347_08080 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GT347_08110 PF00848 Ring hydroxylating alpha subunit (catalytic domain) GT347_08110 PF00355 Rieske [2Fe-2S] domain GT347_08135 PF01370 NAD dependent epimerase/dehydratase family GT347_08140 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family GT347_08150 PF01618 MotA/TolQ/ExbB proton channel family GT347_08155 PF00691 OmpA family GT347_08155 PF13677 Membrane MotB of proton-channel complex MotA/MotB GT347_08160 PF00072 Response regulator receiver domain GT347_08165 PF04344 Chemotaxis phosphatase, CheZ GT347_08180 PF01312 FlhB HrpN YscU SpaS Family GT347_08190 PF00771 FHIPEP family GT347_08195 PF00448 SRP54-type protein, GTPase domain GT347_08205 PF04545 Sigma-70, region 4 GT347_08205 PF04542 Sigma-70 region 2 GT347_08205 PF04539 Sigma-70 region 3 GT347_08220 PF13144 Chaperone for flagella basal body P-ring formation GT347_08225 PF00460 Flagella basal body rod protein GT347_08230 PF00460 Flagella basal body rod protein GT347_08230 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GT347_08240 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GT347_08240 PF00460 Flagella basal body rod protein GT347_08240 PF07559 Flagellar basal body protein FlaE GT347_08245 PF00460 Flagella basal body rod protein GT347_08245 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GT347_08250 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GT347_08250 PF00460 Flagella basal body rod protein GT347_08255 PF02107 Flagellar L-ring protein GT347_08260 PF02119 Flagellar P-ring protein GT347_08265 PF10135 Rod binding protein GT347_08265 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase GT347_08270 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GT347_08270 PF00460 Flagella basal body rod protein GT347_08285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_08285 PF03466 LysR substrate binding domain GT347_08295 PF04055 Radical SAM superfamily GT347_08300 PF01425 Amidase GT347_08305 PF09084 NMT1/THI5 like GT347_08310 PF00528 Binding-protein-dependent transport system inner membrane component GT347_08315 PF00005 ABC transporter GT347_08325 PF01425 Amidase GT347_08335 PF00857 Isochorismatase family GT347_08340 PF07729 FCD domain GT347_08340 PF00392 Bacterial regulatory proteins, gntR family GT347_08350 PF02646 RmuC family GT347_08360 PF00850 Histone deacetylase domain GT347_08365 PF09361 Phasin protein GT347_08370 PF00106 short chain dehydrogenase GT347_08375 PF03466 LysR substrate binding domain GT347_08375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_08380 PF03401 Tripartite tricarboxylate transporter family receptor GT347_08430 PF00749 tRNA synthetases class I (E and Q), catalytic domain GT347_08435 PF00156 Phosphoribosyl transferase domain GT347_08450 PF02875 Mur ligase family, glutamate ligase domain GT347_08450 PF08245 Mur ligase middle domain GT347_08455 PF03960 ArsC family GT347_08470 PF04542 Sigma-70 region 2 GT347_08470 PF08281 Sigma-70, region 4 GT347_08475 PF06865 Pyrimidine/purine nucleoside phosphorylase GT347_08480 PF00764 Arginosuccinate synthase GT347_08490 PF02594 Uncharacterised ACR, YggU family COG1872 GT347_08495 PF00933 Glycosyl hydrolase family 3 N terminal domain GT347_08500 PF01648 4'-phosphopantetheinyl transferase superfamily GT347_08505 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ GT347_08510 PF02565 Recombination protein O C terminal GT347_08510 PF11967 Recombination protein O N terminal GT347_08515 PF01926 50S ribosome-binding GTPase GT347_08515 PF07650 KH domain GT347_08520 PF14622 Ribonuclease-III-like GT347_08520 PF00035 Double-stranded RNA binding motif GT347_08530 PF10502 Signal peptidase, peptidase S26 GT347_08535 PF06421 GTP-binding protein LepA C-terminus GT347_08535 PF00009 Elongation factor Tu GTP binding domain GT347_08535 PF00679 Elongation factor G C-terminus GT347_08540 PF17820 PDZ domain GT347_08540 PF13180 PDZ domain GT347_08555 PF08281 Sigma-70, region 4 GT347_08555 PF04542 Sigma-70 region 2 GT347_08565 PF02801 Beta-ketoacyl synthase, C-terminal domain GT347_08565 PF00109 Beta-ketoacyl synthase, N-terminal domain GT347_08570 PF00550 Phosphopantetheine attachment site GT347_08580 PF00698 Acyl transferase domain GT347_08585 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal GT347_08585 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GT347_08590 PF02504 Fatty acid synthesis protein GT347_08595 PF01783 Ribosomal L32p protein family GT347_08600 PF02620 Large ribosomal RNA subunit accumulation protein YceD GT347_08605 PF02545 Maf-like protein GT347_08615 PF06965 Na+/H+ antiporter 1 GT347_08615 PF01343 Peptidase family S49 GT347_08625 PF13419 Haloacid dehalogenase-like hydrolase GT347_08630 PF00849 RNA pseudouridylate synthase GT347_08630 PF01479 S4 domain GT347_08635 PF12111 Polyribonucleotide phosphorylase C terminal GT347_08635 PF00575 S1 RNA binding domain GT347_08635 PF10150 Ribonuclease E/G family GT347_08640 PF03883 Peroxide stress protein YaaA GT347_08650 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term GT347_08650 PF14489 QueF-like protein GT347_08660 PF01590 GAF domain GT347_08660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_08660 PF00512 His Kinase A (phospho-acceptor) domain GT347_08660 PF00360 Phytochrome region GT347_08660 PF08446 PAS fold GT347_08665 PF00072 Response regulator receiver domain GT347_08675 PF01566 Natural resistance-associated macrophage protein GT347_08685 PF00881 Nitroreductase family GT347_08690 PF11799 impB/mucB/samB family C-terminal domain GT347_08690 PF00817 impB/mucB/samB family GT347_08695 PF01494 FAD binding domain GT347_08700 PF00563 EAL domain GT347_08700 PF00990 Diguanylate cyclase, GGDEF domain GT347_08700 PF03707 Bacterial signalling protein N terminal repeat GT347_08700 PF13188 PAS domain GT347_08710 PF07664 Ferrous iron transport protein B C terminus GT347_08710 PF07670 Nucleoside recognition GT347_08710 PF02421 Ferrous iron transport protein B GT347_08720 PF00330 Aconitase family (aconitate hydratase) GT347_08720 PF00694 Aconitase C-terminal domain GT347_08725 PF00816 H-NS histone family GT347_08730 PF00571 CBS domain GT347_08730 PF03471 Transporter associated domain GT347_08730 PF01595 Cyclin M transmembrane N-terminal domain GT347_08735 PF00149 Calcineurin-like phosphoesterase GT347_08740 PF00271 Helicase conserved C-terminal domain GT347_08740 PF00270 DEAD/DEAH box helicase GT347_08745 PF04228 Putative neutral zinc metallopeptidase GT347_08750 PF00990 Diguanylate cyclase, GGDEF domain GT347_08750 PF00072 Response regulator receiver domain GT347_08765 PF01979 Amidohydrolase family GT347_08770 PF02525 Flavodoxin-like fold GT347_08775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_08775 PF03466 LysR substrate binding domain GT347_08780 PF00962 Adenosine/AMP deaminase GT347_08785 PF00106 short chain dehydrogenase GT347_08790 PF00892 EamA-like transporter family GT347_08795 PF01970 Tripartite tricarboxylate transporter TctA family GT347_08800 PF07331 Tripartite tricarboxylate transporter TctB family GT347_08810 PF00437 Type II/IV secretion system protein GT347_08820 PF01026 TatD related DNase GT347_08825 PF00595 PDZ domain GT347_08830 PF07726 ATPase family associated with various cellular activities (AAA) GT347_08830 PF17863 AAA lid domain GT347_08835 PF01882 Protein of unknown function DUF58 GT347_08840 PF13519 von Willebrand factor type A domain GT347_08845 PF00360 Phytochrome region GT347_08845 PF00990 Diguanylate cyclase, GGDEF domain GT347_08845 PF01590 GAF domain GT347_08845 PF00563 EAL domain GT347_08860 PF13426 PAS domain GT347_08860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_08860 PF00072 Response regulator receiver domain GT347_08870 PF01980 tRNA-methyltransferase O GT347_08875 PF00583 Acetyltransferase (GNAT) family GT347_08910 PF08450 SMP-30/Gluconolactonase/LRE-like region GT347_08915 PF03401 Tripartite tricarboxylate transporter family receptor GT347_08925 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GT347_08925 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GT347_08930 PF03737 Aldolase/RraA GT347_08935 PF03401 Tripartite tricarboxylate transporter family receptor GT347_08940 PF04909 Amidohydrolase GT347_08945 PF03401 Tripartite tricarboxylate transporter family receptor GT347_08965 PF02230 Phospholipase/Carboxylesterase GT347_08970 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase GT347_08980 PF08448 PAS fold GT347_08980 PF00072 Response regulator receiver domain GT347_08980 PF00512 His Kinase A (phospho-acceptor) domain GT347_08980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_08980 PF13188 PAS domain GT347_08985 PF07690 Major Facilitator Superfamily GT347_08990 PF03466 LysR substrate binding domain GT347_08990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_09000 PF18807 Tripartite Tc toxins repeat GT347_09000 PF14431 YwqJ-like deaminase GT347_09005 PF18807 Tripartite Tc toxins repeat GT347_09005 PF14431 YwqJ-like deaminase GT347_09010 PF01979 Amidohydrolase family GT347_09030 PF00576 HIUase/Transthyretin family GT347_09035 PF07729 FCD domain GT347_09035 PF00392 Bacterial regulatory proteins, gntR family GT347_09045 PF01546 Peptidase family M20/M25/M40 GT347_09045 PF07687 Peptidase dimerisation domain GT347_09050 PF01546 Peptidase family M20/M25/M40 GT347_09050 PF07687 Peptidase dimerisation domain GT347_09055 PF02190 ATP-dependent protease La (LON) substrate-binding domain GT347_09055 PF05362 Lon protease (S16) C-terminal proteolytic domain GT347_09055 PF00004 ATPase family associated with various cellular activities (AAA) GT347_09060 PF00571 CBS domain GT347_09060 PF03471 Transporter associated domain GT347_09060 PF01595 Cyclin M transmembrane N-terminal domain GT347_09070 PF01464 Transglycosylase SLT domain GT347_09070 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain GT347_09075 PF03129 Anticodon binding domain GT347_09075 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GT347_09075 PF04073 Aminoacyl-tRNA editing domain GT347_09080 PF00293 NUDIX domain GT347_09090 PF01472 PUA domain GT347_09090 PF00696 Amino acid kinase family GT347_09095 PF01018 GTP1/OBG GT347_09095 PF01926 50S ribosome-binding GTPase GT347_09100 PF01016 Ribosomal L27 protein GT347_09105 PF00829 Ribosomal prokaryotic L21 protein GT347_09110 PF00348 Polyprenyl synthetase GT347_09125 PF12697 Alpha/beta hydrolase family GT347_09130 PF00512 His Kinase A (phospho-acceptor) domain GT347_09130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_09130 PF00672 HAMP domain GT347_09135 PF00563 EAL domain GT347_09135 PF12792 CSS motif domain associated with EAL GT347_09140 PF03401 Tripartite tricarboxylate transporter family receptor GT347_09150 PF02308 MgtC family GT347_09165 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain GT347_09165 PF00437 Type II/IV secretion system protein GT347_09170 PF00482 Type II secretion system (T2SS), protein F GT347_09175 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GT347_09175 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GT347_09180 PF01478 Type IV leader peptidase family GT347_09180 PF06750 Bacterial Peptidase A24 N-terminal domain GT347_09185 PF01121 Dephospho-CoA kinase GT347_09190 PF07072 Cell division protein GT347_09195 PF03884 DNA gyrase inhibitor YacG GT347_09200 PF00293 NUDIX domain GT347_09210 PF01960 ArgJ family GT347_09215 PF07516 SecA Wing and Scaffold domain GT347_09215 PF07517 SecA DEAD-like domain GT347_09215 PF02810 SEC-C motif GT347_09215 PF01043 SecA preprotein cross-linking domain GT347_09225 PF05567 Neisseria PilC beta-propeller domain GT347_09250 PF07963 Prokaryotic N-terminal methylation motif GT347_09250 PF00114 Pilin (bacterial filament) GT347_09265 PF13458 Periplasmic binding protein GT347_09270 PF02653 Branched-chain amino acid transport system / permease component GT347_09280 PF00005 ABC transporter GT347_09280 PF12399 Branched-chain amino acid ATP-binding cassette transporter GT347_09285 PF00005 ABC transporter GT347_09290 PF05853 beta-keto acid cleavage enzyme GT347_09295 PF07519 Tannase and feruloyl esterase GT347_09300 PF00248 Aldo/keto reductase family GT347_09310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_09310 PF03466 LysR substrate binding domain GT347_09330 PF04386 Stringent starvation protein B GT347_09335 PF02798 Glutathione S-transferase, N-terminal domain GT347_09335 PF00043 Glutathione S-transferase, C-terminal domain GT347_09340 PF02167 Cytochrome C1 family GT347_09345 PF00033 Cytochrome b/b6/petB GT347_09345 PF00032 Cytochrome b(C-terminal)/b6/petD GT347_09350 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal GT347_09350 PF00355 Rieske [2Fe-2S] domain GT347_09355 PF04166 Pyridoxal phosphate biosynthetic protein PdxA GT347_09360 PF01784 NIF3 (NGG1p interacting factor 3) GT347_09365 PF17820 PDZ domain GT347_09365 PF13180 PDZ domain GT347_09370 PF13458 Periplasmic binding protein GT347_09375 PF02653 Branched-chain amino acid transport system / permease component GT347_09380 PF02653 Branched-chain amino acid transport system / permease component GT347_09380 PF11862 Domain of unknown function (DUF3382) GT347_09385 PF00005 ABC transporter GT347_09385 PF12399 Branched-chain amino acid ATP-binding cassette transporter GT347_09390 PF00005 ABC transporter GT347_09395 PF00902 Sec-independent protein translocase protein (TatC) GT347_09400 PF02416 mttA/Hcf106 family GT347_09405 PF02416 mttA/Hcf106 family GT347_09410 PF01230 HIT domain GT347_09420 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase GT347_09425 PF01502 Phosphoribosyl-AMP cyclohydrolase GT347_09430 PF00977 Histidine biosynthesis protein GT347_09440 PF00977 Histidine biosynthesis protein GT347_09445 PF00117 Glutamine amidotransferase class-I GT347_09450 PF00475 Imidazoleglycerol-phosphate dehydratase GT347_09455 PF00155 Aminotransferase class I and II GT347_09460 PF00815 Histidinol dehydrogenase GT347_09465 PF01634 ATP phosphoribosyltransferase GT347_09470 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GT347_09475 PF01722 BolA-like protein GT347_09480 PF01061 ABC-2 type transporter GT347_09485 PF00005 ABC transporter GT347_09495 PF05494 MlaC protein GT347_09505 PF02470 MlaD protein GT347_09510 PF02405 Permease MlaE GT347_09515 PF00005 ABC transporter GT347_09520 PF07992 Pyridine nucleotide-disulphide oxidoreductase GT347_09520 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster GT347_09525 PF04898 Glutamate synthase central domain GT347_09525 PF00310 Glutamine amidotransferases class-II GT347_09525 PF01493 GXGXG motif GT347_09525 PF01645 Conserved region in glutamate synthase GT347_09560 PF01966 HD domain GT347_09560 PF13286 Phosphohydrolase-associated domain GT347_09565 PF01761 3-dehydroquinate synthase GT347_09570 PF01202 Shikimate kinase GT347_09580 PF03958 Bacterial type II/III secretion system short domain GT347_09580 PF07660 Secretin and TonB N terminus short domain GT347_09580 PF00263 Bacterial type II and III secretion system protein GT347_09580 PF11741 AMIN domain GT347_09605 PF00905 Penicillin binding protein transpeptidase domain GT347_09605 PF00912 Transglycosylase GT347_09605 PF17092 Penicillin-binding protein OB-like domain GT347_09610 PF01491 Frataxin-like domain GT347_09620 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain GT347_09620 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain GT347_09630 PF01794 Ferric reductase like transmembrane component GT347_09640 PF00174 Oxidoreductase molybdopterin binding domain GT347_09645 PF01578 Cytochrome C assembly protein GT347_09650 PF05140 ResB-like family GT347_09655 PF00034 Cytochrome c GT347_09660 PF01926 50S ribosome-binding GTPase GT347_09680 PF03279 Bacterial lipid A biosynthesis acyltransferase GT347_09685 PF03279 Bacterial lipid A biosynthesis acyltransferase GT347_09690 PF02772 S-adenosylmethionine synthetase, central domain GT347_09690 PF00438 S-adenosylmethionine synthetase, N-terminal domain GT347_09690 PF02773 S-adenosylmethionine synthetase, C-terminal domain GT347_09700 PF02321 Outer membrane efflux protein GT347_09705 PF00873 AcrB/AcrD/AcrF family GT347_09710 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GT347_09710 PF00529 HlyD membrane-fusion protein of T1SS GT347_09715 PF00248 Aldo/keto reductase family GT347_09720 PF07690 Major Facilitator Superfamily GT347_09725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_09725 PF03466 LysR substrate binding domain GT347_09740 PF02694 Uncharacterised BCR, YnfA/UPF0060 family GT347_09745 PF00672 HAMP domain GT347_09745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GT347_09745 PF02203 Tar ligand binding domain homologue GT347_09750 PF00563 EAL domain GT347_09750 PF12792 CSS motif domain associated with EAL GT347_09765 PF00563 EAL domain GT347_09765 PF01590 GAF domain GT347_09765 PF00990 Diguanylate cyclase, GGDEF domain GT347_09765 PF00360 Phytochrome region GT347_09770 PF00166 Chaperonin 10 Kd subunit GT347_09775 PF00118 TCP-1/cpn60 chaperonin family GT347_09780 PF00342 Phosphoglucose isomerase GT347_09785 PF00923 Transaldolase/Fructose-6-phosphate aldolase GT347_09790 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain GT347_09790 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain GT347_09795 PF01380 SIS domain GT347_09795 PF02685 Glucokinase GT347_09795 PF01418 Helix-turn-helix domain, rpiR family GT347_09800 PF00072 Response regulator receiver domain GT347_09800 PF00486 Transcriptional regulatory protein, C terminal GT347_09840 PF01553 Acyltransferase GT347_09845 PF01979 Amidohydrolase family GT347_09850 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GT347_09850 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GT347_09855 PF00156 Phosphoribosyl transferase domain GT347_09860 PF03652 Holliday junction resolvase GT347_09865 PF02622 Uncharacterized ACR, COG1678 GT347_09870 PF03441 FAD binding domain of DNA photolyase GT347_09870 PF00875 DNA photolyase GT347_09885 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term GT347_09885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GT347_09895 PF00072 Response regulator receiver domain GT347_09900 PF00072 Response regulator receiver domain GT347_09905 PF00301 Rubredoxin GT347_09915 PF00202 Aminotransferase class-III GT347_09920 PF07715 TonB-dependent Receptor Plug Domain GT347_09920 PF00593 TonB dependent receptor GT347_09930 PF02954 Bacterial regulatory protein, Fis family GT347_09930 PF00158 Sigma-54 interaction domain GT347_09930 PF01590 GAF domain GT347_09935 PF01808 AICARFT/IMPCHase bienzyme GT347_09935 PF02142 MGS-like domain GT347_09940 PF02954 Bacterial regulatory protein, Fis family GT347_09945 PF01207 Dihydrouridine synthase (Dus) GT347_09950 PF09335 SNARE associated Golgi protein GT347_09960 PF13609 Gram-negative porin GT347_09965 PF03232 Ubiquinone biosynthesis protein COQ7 GT347_09975 PF00585 C-terminal regulatory domain of Threonine dehydratase GT347_09975 PF00291 Pyridoxal-phosphate dependent enzyme GT347_09980 PF02654 Cobalamin-5-phosphate synthase GT347_09995 PF08334 Type II secretion system (T2SS), protein G GT347_09995 PF07963 Prokaryotic N-terminal methylation motif GT347_10005 PF02501 Type II secretion system (T2SS), protein I GT347_10005 PF07963 Prokaryotic N-terminal methylation motif GT347_10010 PF11612 Type II secretion system (T2SS), protein J GT347_10010 PF07963 Prokaryotic N-terminal methylation motif GT347_10015 PF03934 Type II secretion system (T2SS), protein K GT347_10035 PF00263 Bacterial type II and III secretion system protein GT347_10035 PF03958 Bacterial type II/III secretion system short domain GT347_10040 PF00437 Type II/IV secretion system protein GT347_10055 PF13018 Extended Signal Peptide of Type V secretion system GT347_10055 PF03895 YadA-like membrane anchor domain GT347_10055 PF05658 Head domain of trimeric autotransporter adhesin GT347_10055 PF05662 Coiled stalk of trimeric autotransporter adhesin GT347_10065 PF18071 HMW1C N-terminal GT347_10065 PF18254 HMW1 domain 2 GT347_10085 PF03401 Tripartite tricarboxylate transporter family receptor GT347_10090 PF03401 Tripartite tricarboxylate transporter family receptor GT347_10095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_10095 PF03466 LysR substrate binding domain GT347_10100 PF03401 Tripartite tricarboxylate transporter family receptor GT347_10115 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GT347_10115 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GT347_10125 PF03401 Tripartite tricarboxylate transporter family receptor GT347_10130 PF02615 Malate/L-lactate dehydrogenase GT347_10135 PF03466 LysR substrate binding domain GT347_10135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_10145 PF07063 Domain of unknown function (DUF1338) GT347_10150 PF03466 LysR substrate binding domain GT347_10150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_10155 PF00392 Bacterial regulatory proteins, gntR family GT347_10155 PF07729 FCD domain GT347_10170 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GT347_10175 PF00528 Binding-protein-dependent transport system inner membrane component GT347_10180 PF00528 Binding-protein-dependent transport system inner membrane component GT347_10180 PF12911 N-terminal TM domain of oligopeptide transport permease C GT347_10185 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GT347_10185 PF00005 ABC transporter GT347_10190 PF00005 ABC transporter GT347_10190 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GT347_10210 PF01546 Peptidase family M20/M25/M40 GT347_10210 PF07687 Peptidase dimerisation domain GT347_10235 PF13533 Biotin-lipoyl like GT347_10255 PF00037 4Fe-4S binding domain GT347_10255 PF11953 Domain of unknown function (DUF3470) GT347_10260 PF08021 Siderophore-interacting FAD-binding domain GT347_10260 PF04954 Siderophore-interacting protein GT347_10265 PF01047 MarR family GT347_10270 PF03976 Polyphosphate kinase 2 (PPK2) GT347_10280 PF01569 PAP2 superfamily GT347_10285 PF03401 Tripartite tricarboxylate transporter family receptor GT347_10295 PF03737 Aldolase/RraA GT347_10305 PF03401 Tripartite tricarboxylate transporter family receptor GT347_10310 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GT347_10310 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GT347_10320 PF02666 Phosphatidylserine decarboxylase GT347_10330 PF02633 Creatinine amidohydrolase GT347_10335 PF03466 LysR substrate binding domain GT347_10335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_10365 PF00155 Aminotransferase class I and II GT347_10370 PF02567 Phenazine biosynthesis-like protein GT347_10375 PF02798 Glutathione S-transferase, N-terminal domain GT347_10380 PF00155 Aminotransferase class I and II GT347_10390 PF00593 TonB dependent receptor GT347_10390 PF07715 TonB-dependent Receptor Plug Domain GT347_10400 PF12911 N-terminal TM domain of oligopeptide transport permease C GT347_10400 PF00528 Binding-protein-dependent transport system inner membrane component GT347_10405 PF00528 Binding-protein-dependent transport system inner membrane component GT347_10410 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GT347_10415 PF00005 ABC transporter GT347_10415 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GT347_10420 PF01568 Molydopterin dinucleotide binding domain GT347_10420 PF00384 Molybdopterin oxidoreductase GT347_10425 PF01614 Bacterial transcriptional regulator GT347_10425 PF09339 IclR helix-turn-helix domain GT347_10430 PF00171 Aldehyde dehydrogenase family GT347_10440 PF00596 Class II Aldolase and Adducin N-terminal domain GT347_10445 PF00202 Aminotransferase class-III GT347_10455 PF01968 Hydantoinase/oxoprolinase GT347_10455 PF05378 Hydantoinase/oxoprolinase N-terminal region GT347_10460 PF00528 Binding-protein-dependent transport system inner membrane component GT347_10465 PF00528 Binding-protein-dependent transport system inner membrane component GT347_10470 PF00005 ABC transporter GT347_10475 PF00497 Bacterial extracellular solute-binding proteins, family 3 GT347_10480 PF00155 Aminotransferase class I and II GT347_10480 PF00392 Bacterial regulatory proteins, gntR family GT347_10485 PF02913 FAD linked oxidases, C-terminal domain GT347_10485 PF01565 FAD binding domain GT347_10495 PF00491 Arginase family GT347_10500 PF07690 Major Facilitator Superfamily GT347_10505 PF01168 Alanine racemase, N-terminal domain GT347_10510 PF00437 Type II/IV secretion system protein GT347_10515 PF00027 Cyclic nucleotide-binding domain GT347_10515 PF13545 Crp-like helix-turn-helix domain GT347_10520 PF00437 Type II/IV secretion system protein GT347_10525 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GT347_10525 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GT347_10530 PF02253 Phospholipase A1 GT347_10535 PF00580 UvrD/REP helicase N-terminal domain GT347_10535 PF13361 UvrD-like helicase C-terminal domain GT347_10550 PF13580 SIS domain GT347_10555 PF04972 BON domain GT347_10590 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system GT347_10595 PF01171 PP-loop family GT347_10605 PF00300 Histidine phosphatase superfamily (branch 1) GT347_10615 PF05496 Holliday junction DNA helicase RuvB P-loop domain GT347_10615 PF05491 RuvB C-terminal winged helix domain GT347_10615 PF17864 RuvB AAA lid domain GT347_10635 PF07499 RuvA, C-terminal domain GT347_10635 PF01330 RuvA N terminal domain GT347_10640 PF02562 PhoH-like protein GT347_10645 PF02130 Uncharacterized protein family UPF0054 GT347_10655 PF02580 D-Tyr-tRNA(Tyr) deacylase GT347_10660 PF07992 Pyridine nucleotide-disulphide oxidoreductase GT347_10660 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GT347_10665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_10665 PF03466 LysR substrate binding domain GT347_10680 PF01048 Phosphorylase superfamily GT347_10680 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus GT347_10695 PF02222 ATP-grasp domain GT347_10700 PF00005 ABC transporter GT347_10705 PF01061 ABC-2 type transporter GT347_10710 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GT347_10710 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GT347_10715 PF03466 LysR substrate binding domain GT347_10715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_10720 PF01565 FAD binding domain GT347_10720 PF02913 FAD linked oxidases, C-terminal domain GT347_10725 PF07690 Major Facilitator Superfamily GT347_10730 PF08546 Ketopantoate reductase PanE/ApbA C terminal GT347_10730 PF02558 Ketopantoate reductase PanE/ApbA GT347_10735 PF09905 DNA-binding protein VF530 GT347_10740 PF00183 Hsp90 protein GT347_10740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_10745 PF00849 RNA pseudouridylate synthase GT347_10745 PF01479 S4 domain GT347_10750 PF00581 Rhodanese-like domain GT347_10760 PF00206 Lyase GT347_10760 PF14698 Argininosuccinate lyase C-terminal GT347_10770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_10770 PF03466 LysR substrate binding domain GT347_10775 PF01566 Natural resistance-associated macrophage protein GT347_10805 PF01597 Glycine cleavage H-protein GT347_10810 PF00596 Class II Aldolase and Adducin N-terminal domain GT347_10820 PF02567 Phenazine biosynthesis-like protein GT347_10825 PF03401 Tripartite tricarboxylate transporter family receptor GT347_10835 PF01926 50S ribosome-binding GTPase GT347_10835 PF06071 Protein of unknown function (DUF933) GT347_10840 PF00534 Glycosyl transferases group 1 GT347_10840 PF13439 Glycosyltransferase Family 4 GT347_10845 PF01266 FAD dependent oxidoreductase GT347_10855 PF01494 FAD binding domain GT347_10860 PF10411 Disulfide bond isomerase protein N-terminus GT347_10860 PF13098 Thioredoxin-like domain GT347_10880 PF01381 Helix-turn-helix GT347_10915 PF01842 ACT domain GT347_10915 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GT347_10915 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GT347_10925 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GT347_10930 PF03480 Bacterial extracellular solute-binding protein, family 7 GT347_10935 PF00768 D-alanyl-D-alanine carboxypeptidase GT347_10935 PF07943 Penicillin-binding protein 5, C-terminal domain GT347_10940 PF01223 DNA/RNA non-specific endonuclease GT347_10945 PF00180 Isocitrate/isopropylmalate dehydrogenase GT347_10950 PF03401 Tripartite tricarboxylate transporter family receptor GT347_10955 PF00392 Bacterial regulatory proteins, gntR family GT347_10955 PF07729 FCD domain GT347_10965 PF03401 Tripartite tricarboxylate transporter family receptor GT347_10975 PF03401 Tripartite tricarboxylate transporter family receptor GT347_10980 PF04909 Amidohydrolase GT347_10985 PF03737 Aldolase/RraA GT347_10990 PF13609 Gram-negative porin GT347_11000 PF13609 Gram-negative porin GT347_11005 PF03401 Tripartite tricarboxylate transporter family receptor GT347_11010 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase GT347_11010 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit GT347_11015 PF03466 LysR substrate binding domain GT347_11015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_11020 PF01042 Endoribonuclease L-PSP GT347_11025 PF12793 Sugar transport-related sRNA regulator N-term GT347_11025 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GT347_11030 PF00528 Binding-protein-dependent transport system inner membrane component GT347_11035 PF12911 N-terminal TM domain of oligopeptide transport permease C GT347_11035 PF00528 Binding-protein-dependent transport system inner membrane component GT347_11040 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GT347_11040 PF00005 ABC transporter GT347_11045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GT347_11045 PF00005 ABC transporter GT347_11055 PF01380 SIS domain GT347_11055 PF01418 Helix-turn-helix domain, rpiR family GT347_11060 PF07969 Amidohydrolase family GT347_11065 PF01370 NAD dependent epimerase/dehydratase family GT347_11075 PF03466 LysR substrate binding domain GT347_11075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_11080 PF16363 GDP-mannose 4,6 dehydratase GT347_11085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_11085 PF03466 LysR substrate binding domain GT347_11090 PF01212 Beta-eliminating lyase GT347_11095 PF03401 Tripartite tricarboxylate transporter family receptor GT347_11100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_11100 PF03466 LysR substrate binding domain GT347_11105 PF05378 Hydantoinase/oxoprolinase N-terminal region GT347_11105 PF01968 Hydantoinase/oxoprolinase GT347_11120 PF03401 Tripartite tricarboxylate transporter family receptor GT347_11125 PF13609 Gram-negative porin GT347_11130 PF07690 Major Facilitator Superfamily GT347_11135 PF00528 Binding-protein-dependent transport system inner membrane component GT347_11140 PF12911 N-terminal TM domain of oligopeptide transport permease C GT347_11140 PF00528 Binding-protein-dependent transport system inner membrane component GT347_11145 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GT347_11150 PF01979 Amidohydrolase family GT347_11155 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GT347_11155 PF00005 ABC transporter GT347_11160 PF00449 Urease alpha-subunit, N-terminal domain GT347_11160 PF01979 Amidohydrolase family GT347_11165 PF01177 Asp/Glu/Hydantoin racemase GT347_11175 PF03401 Tripartite tricarboxylate transporter family receptor GT347_11180 PF00795 Carbon-nitrogen hydrolase GT347_11185 PF03466 LysR substrate binding domain GT347_11185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_11190 PF09339 IclR helix-turn-helix domain GT347_11190 PF01614 Bacterial transcriptional regulator GT347_11195 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GT347_11195 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GT347_11200 PF00171 Aldehyde dehydrogenase family GT347_11205 PF03401 Tripartite tricarboxylate transporter family receptor GT347_11210 PF00248 Aldo/keto reductase family GT347_11240 PF00528 Binding-protein-dependent transport system inner membrane component GT347_11245 PF00528 Binding-protein-dependent transport system inner membrane component GT347_11250 PF13416 Bacterial extracellular solute-binding protein GT347_11255 PF01042 Endoribonuclease L-PSP GT347_11270 PF01546 Peptidase family M20/M25/M40 GT347_11270 PF07687 Peptidase dimerisation domain GT347_11280 PF08402 TOBE domain GT347_11280 PF00005 ABC transporter GT347_11285 PF08240 Alcohol dehydrogenase GroES-like domain GT347_11285 PF14765 Polyketide synthase dehydratase GT347_11285 PF00550 Phosphopantetheine attachment site GT347_11285 PF00698 Acyl transferase domain GT347_11285 PF08659 KR domain GT347_11295 PF01220 Dehydroquinase class II GT347_11300 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GT347_11305 PF00795 Carbon-nitrogen hydrolase GT347_11315 PF03069 Acetamidase/Formamidase family GT347_11320 PF00005 ABC transporter GT347_11325 PF00005 ABC transporter GT347_11325 PF12399 Branched-chain amino acid ATP-binding cassette transporter GT347_11335 PF02653 Branched-chain amino acid transport system / permease component GT347_11335 PF11862 Domain of unknown function (DUF3382) GT347_11345 PF17149 Periplasmic sensor domain found in signal transduction proteins GT347_11345 PF00072 Response regulator receiver domain GT347_11345 PF01627 Hpt domain GT347_11345 PF00512 His Kinase A (phospho-acceptor) domain GT347_11345 PF00672 HAMP domain GT347_11345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_11350 PF00072 Response regulator receiver domain GT347_11355 PF00263 Bacterial type II and III secretion system protein GT347_11355 PF03958 Bacterial type II/III secretion system short domain GT347_11360 PF03466 LysR substrate binding domain GT347_11360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_11365 PF04909 Amidohydrolase GT347_11370 PF03401 Tripartite tricarboxylate transporter family receptor GT347_11380 PF04909 Amidohydrolase GT347_11385 PF03737 Aldolase/RraA GT347_11390 PF00155 Aminotransferase class I and II GT347_11395 PF00005 ABC transporter GT347_11400 PF00528 Binding-protein-dependent transport system inner membrane component GT347_11405 PF00528 Binding-protein-dependent transport system inner membrane component GT347_11420 PF03466 LysR substrate binding domain GT347_11420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_11430 PF05378 Hydantoinase/oxoprolinase N-terminal region GT347_11430 PF01968 Hydantoinase/oxoprolinase GT347_11435 PF02538 Hydantoinase B/oxoprolinase GT347_11440 PF03401 Tripartite tricarboxylate transporter family receptor GT347_11445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_11445 PF03466 LysR substrate binding domain GT347_11450 PF00155 Aminotransferase class I and II GT347_11460 PF13247 4Fe-4S dicluster domain GT347_11460 PF09163 Formate dehydrogenase N, transmembrane GT347_11465 PF01292 Prokaryotic cytochrome b561 GT347_11470 PF04216 Protein involved in formate dehydrogenase formation GT347_11475 PF03841 L-seryl-tRNA selenium transferase GT347_11475 PF12390 Selenocysteine synthase N terminal GT347_11480 PF09105 Elongation factor SelB, winged helix GT347_11480 PF09107 Elongation factor SelB, winged helix GT347_11480 PF03144 Elongation factor Tu domain 2 GT347_11480 PF00009 Elongation factor Tu GTP binding domain GT347_11480 PF09106 Elongation factor SelB, winged helix GT347_11495 PF00356 Bacterial regulatory proteins, lacI family GT347_11500 PF00892 EamA-like transporter family GT347_11505 PF03466 LysR substrate binding domain GT347_11505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_11510 PF00202 Aminotransferase class-III GT347_11515 PF00665 Integrase core domain GT347_11520 PF00296 Luciferase-like monooxygenase GT347_11525 PF00857 Isochorismatase family GT347_11530 PF01042 Endoribonuclease L-PSP GT347_11535 PF00561 alpha/beta hydrolase fold GT347_11540 PF00881 Nitroreductase family GT347_11545 PF01613 Flavin reductase like domain GT347_11550 PF01557 Fumarylacetoacetate (FAA) hydrolase family GT347_11555 PF01557 Fumarylacetoacetate (FAA) hydrolase family GT347_11560 PF04909 Amidohydrolase GT347_11565 PF01042 Endoribonuclease L-PSP GT347_11570 PF03401 Tripartite tricarboxylate transporter family receptor GT347_11575 PF01613 Flavin reductase like domain GT347_11580 PF01614 Bacterial transcriptional regulator GT347_11580 PF09339 IclR helix-turn-helix domain GT347_11630 PF00550 Phosphopantetheine attachment site GT347_11635 PF01648 4'-phosphopantetheinyl transferase superfamily GT347_11640 PF00392 Bacterial regulatory proteins, gntR family GT347_11640 PF07729 FCD domain GT347_11645 PF02423 Ornithine cyclodeaminase/mu-crystallin family GT347_11670 PF00171 Aldehyde dehydrogenase family GT347_11680 PF00111 2Fe-2S iron-sulfur cluster binding domain GT347_11680 PF00175 Oxidoreductase NAD-binding domain GT347_11680 PF00970 Oxidoreductase FAD-binding domain GT347_11695 PF01425 Amidase GT347_11700 PF14031 Putative serine dehydratase domain GT347_11700 PF01168 Alanine racemase, N-terminal domain GT347_11705 PF03401 Tripartite tricarboxylate transporter family receptor GT347_11710 PF00291 Pyridoxal-phosphate dependent enzyme GT347_11715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_11715 PF03466 LysR substrate binding domain GT347_11725 PF07690 Major Facilitator Superfamily GT347_11735 PF00356 Bacterial regulatory proteins, lacI family GT347_11745 PF01047 MarR family GT347_11750 PF02566 OsmC-like protein GT347_11755 PF01636 Phosphotransferase enzyme family GT347_11760 PF00999 Sodium/hydrogen exchanger family GT347_11780 PF00512 His Kinase A (phospho-acceptor) domain GT347_11780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_11780 PF08521 Two-component sensor kinase N-terminal GT347_11785 PF00486 Transcriptional regulatory protein, C terminal GT347_11785 PF00072 Response regulator receiver domain GT347_11790 PF01266 FAD dependent oxidoreductase GT347_11810 PF02954 Bacterial regulatory protein, Fis family GT347_11810 PF00158 Sigma-54 interaction domain GT347_11810 PF00072 Response regulator receiver domain GT347_11815 PF00512 His Kinase A (phospho-acceptor) domain GT347_11815 PF00672 HAMP domain GT347_11815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_11815 PF00989 PAS fold GT347_11825 PF01029 NusB family GT347_11825 PF01189 16S rRNA methyltransferase RsmB/F GT347_11835 PF05000 RNA polymerase Rpb1, domain 4 GT347_11835 PF04983 RNA polymerase Rpb1, domain 3 GT347_11835 PF04997 RNA polymerase Rpb1, domain 1 GT347_11835 PF00623 RNA polymerase Rpb1, domain 2 GT347_11835 PF04998 RNA polymerase Rpb1, domain 5 GT347_11840 PF04563 RNA polymerase beta subunit GT347_11840 PF04561 RNA polymerase Rpb2, domain 2 GT347_11840 PF04565 RNA polymerase Rpb2, domain 3 GT347_11840 PF10385 RNA polymerase beta subunit external 1 domain GT347_11840 PF04560 RNA polymerase Rpb2, domain 7 GT347_11840 PF00562 RNA polymerase Rpb2, domain 6 GT347_11845 PF16320 Ribosomal protein L7/L12 dimerisation domain GT347_11845 PF00542 Ribosomal protein L7/L12 C-terminal domain GT347_11850 PF00466 Ribosomal protein L10 GT347_11855 PF00687 Ribosomal protein L1p/L10e family GT347_11860 PF03946 Ribosomal protein L11, N-terminal domain GT347_11860 PF00298 Ribosomal protein L11, RNA binding domain GT347_11865 PF00467 KOW motif GT347_11865 PF02357 Transcription termination factor nusG GT347_11880 PF03143 Elongation factor Tu C-terminal domain GT347_11880 PF03144 Elongation factor Tu domain 2 GT347_11880 PF00009 Elongation factor Tu GTP binding domain GT347_11905 PF03167 Uracil DNA glycosylase superfamily GT347_11910 PF00218 Indole-3-glycerol phosphate synthase GT347_11915 PF02885 Glycosyl transferase family, helical bundle domain GT347_11915 PF00591 Glycosyl transferase family, a/b domain GT347_11920 PF00117 Glutamine amidotransferase class-I GT347_11925 PF00425 chorismate binding enzyme GT347_11925 PF04715 Anthranilate synthase component I, N terminal region GT347_11930 PF13419 Haloacid dehalogenase-like hydrolase GT347_11945 PF18011 C-terminal domain found in long catalases GT347_11945 PF00199 Catalase GT347_11945 PF06628 Catalase-related immune-responsive GT347_11950 PF00834 Ribulose-phosphate 3 epimerase family GT347_11955 PF04379 ApaG domain GT347_11965 PF17152 Periplasmic sensor domain GT347_11965 PF00990 Diguanylate cyclase, GGDEF domain GT347_11980 PF04107 Glutamate-cysteine ligase family 2(GCS2) GT347_11985 PF03401 Tripartite tricarboxylate transporter family receptor GT347_12005 PF08713 DNA alkylation repair enzyme GT347_12010 PF02769 AIR synthase related protein, C-terminal domain GT347_12010 PF00586 AIR synthase related protein, N-terminal domain GT347_12015 PF04608 Phosphatidylglycerophosphatase A GT347_12020 PF02464 Competence-damaged protein GT347_12025 PF03707 Bacterial signalling protein N terminal repeat GT347_12025 PF00990 Diguanylate cyclase, GGDEF domain GT347_12025 PF00563 EAL domain GT347_12030 PF02810 SEC-C motif GT347_12030 PF01043 SecA preprotein cross-linking domain GT347_12030 PF07516 SecA Wing and Scaffold domain GT347_12030 PF07517 SecA DEAD-like domain GT347_12035 PF01645 Conserved region in glutamate synthase GT347_12050 PF07729 FCD domain GT347_12050 PF00392 Bacterial regulatory proteins, gntR family GT347_12060 PF02447 GntP family permease GT347_12065 PF17042 Nucleotide-binding C-terminal domain GT347_12065 PF07005 Sugar-binding N-terminal domain GT347_12070 PF00596 Class II Aldolase and Adducin N-terminal domain GT347_12075 PF00376 MerR family regulatory protein GT347_12075 PF09278 MerR, DNA binding GT347_12085 PF07690 Major Facilitator Superfamily GT347_12095 PF01979 Amidohydrolase family GT347_12100 PF01170 Putative RNA methylase family UPF0020 GT347_12100 PF02926 THUMP domain GT347_12120 PF04963 Sigma-54 factor, core binding domain GT347_12120 PF00309 Sigma-54 factor, Activator interacting domain (AID) GT347_12120 PF04552 Sigma-54, DNA binding domain GT347_12125 PF12399 Branched-chain amino acid ATP-binding cassette transporter GT347_12125 PF00005 ABC transporter GT347_12130 PF03968 OstA-like protein GT347_12135 PF13462 Thioredoxin GT347_12145 PF03485 Arginyl tRNA synthetase N terminal domain GT347_12145 PF05746 DALR anticodon binding domain GT347_12145 PF00750 tRNA synthetases class I (R) GT347_12155 PF03466 LysR substrate binding domain GT347_12155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_12160 PF01274 Malate synthase GT347_12170 PF01361 Tautomerase enzyme GT347_12175 PF13230 Glutamine amidotransferases class-II GT347_12205 PF02951 Prokaryotic glutathione synthetase, N-terminal domain GT347_12205 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain GT347_12210 PF03594 Benzoate membrane transport protein GT347_12215 PF02705 K+ potassium transporter GT347_12225 PF00171 Aldehyde dehydrogenase family GT347_12240 PF08264 Anticodon-binding domain of tRNA GT347_12240 PF00133 tRNA synthetases class I (I, L, M and V) GT347_12240 PF13603 Leucyl-tRNA synthetase, Domain 2 GT347_12240 PF09334 tRNA synthetases class I (M) GT347_12245 PF02472 Biopolymer transport protein ExbD/TolR GT347_12250 PF01618 MotA/TolQ/ExbB proton channel family GT347_12255 PF01113 Dihydrodipicolinate reductase, N-terminus GT347_12255 PF05173 Dihydrodipicolinate reductase, C-terminus GT347_12260 PF04355 SmpA / OmlA family GT347_12265 PF01475 Ferric uptake regulator family GT347_12270 PF07475 HPr Serine kinase C-terminal domain GT347_12270 PF02603 HPr Serine kinase N terminus GT347_12275 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GT347_12280 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein GT347_12285 PF01544 CorA-like Mg2+ transporter protein GT347_12290 PF01048 Phosphorylase superfamily GT347_12295 PF13193 AMP-binding enzyme C-terminal domain GT347_12295 PF00501 AMP-binding enzyme GT347_12305 PF02355 Protein export membrane protein GT347_12305 PF07549 SecD/SecF GG Motif GT347_12310 PF07549 SecD/SecF GG Motif GT347_12310 PF13721 SecD export protein N-terminal TM region GT347_12310 PF02355 Protein export membrane protein GT347_12315 PF02699 Preprotein translocase subunit GT347_12320 PF03401 Tripartite tricarboxylate transporter family receptor GT347_12330 PF00171 Aldehyde dehydrogenase family GT347_12335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_12335 PF03466 LysR substrate binding domain GT347_12350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_12350 PF03466 LysR substrate binding domain GT347_12365 PF03466 LysR substrate binding domain GT347_12365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_12375 PF01177 Asp/Glu/Hydantoin racemase GT347_12380 PF00497 Bacterial extracellular solute-binding proteins, family 3 GT347_12385 PF13488 Glycine zipper GT347_12385 PF00691 OmpA family GT347_12405 PF00577 Outer membrane usher protein GT347_12405 PF13953 PapC C-terminal domain GT347_12405 PF13954 PapC N-terminal domain GT347_12425 PF00224 Pyruvate kinase, barrel domain GT347_12425 PF02887 Pyruvate kinase, alpha/beta domain GT347_12435 PF00162 Phosphoglycerate kinase GT347_12440 PF00072 Response regulator receiver domain GT347_12455 PF02911 Formyl transferase, C-terminal domain GT347_12455 PF00551 Formyl transferase GT347_12465 PF01327 Polypeptide deformylase GT347_12475 PF17782 DprA winged helix domain GT347_12475 PF02481 DNA recombination-mediator protein A GT347_12480 PF00654 Voltage gated chloride channel GT347_12485 PF00436 Single-strand binding protein family GT347_12490 PF03880 DbpA RNA binding domain GT347_12490 PF00270 DEAD/DEAH box helicase GT347_12490 PF00271 Helicase conserved C-terminal domain GT347_12510 PF13426 PAS domain GT347_12510 PF00990 Diguanylate cyclase, GGDEF domain GT347_12510 PF00563 EAL domain GT347_12530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_12530 PF03466 LysR substrate binding domain GT347_12535 PF00497 Bacterial extracellular solute-binding proteins, family 3 GT347_12540 PF07476 Methylaspartate ammonia-lyase C-terminus GT347_12540 PF05034 Methylaspartate ammonia-lyase N-terminus GT347_12545 PF03328 HpcH/HpaI aldolase/citrate lyase family GT347_12550 PF02515 CoA-transferase family III GT347_12555 PF03466 LysR substrate binding domain GT347_12555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_12570 PF02203 Tar ligand binding domain homologue GT347_12570 PF00672 HAMP domain GT347_12570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GT347_12575 PF04205 FMN-binding domain GT347_12575 PF00890 FAD binding domain GT347_12575 PF03358 NADPH-dependent FMN reductase GT347_12585 PF03401 Tripartite tricarboxylate transporter family receptor GT347_12590 PF00596 Class II Aldolase and Adducin N-terminal domain GT347_12595 PF03401 Tripartite tricarboxylate transporter family receptor GT347_12605 PF03401 Tripartite tricarboxylate transporter family receptor GT347_12610 PF01842 ACT domain GT347_12610 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GT347_12610 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GT347_12615 PF07690 Major Facilitator Superfamily GT347_12620 PF00990 Diguanylate cyclase, GGDEF domain GT347_12620 PF07694 5TMR of 5TMR-LYT GT347_12625 PF17755 UvrA DNA-binding domain GT347_12625 PF17760 UvrA interaction domain GT347_12635 PF07690 Major Facilitator Superfamily GT347_12640 PF02310 B12 binding domain GT347_12640 PF02607 B12 binding domain GT347_12640 PF02965 Vitamin B12 dependent methionine synthase, activation domain GT347_12640 PF00809 Pterin binding enzyme GT347_12640 PF02574 Homocysteine S-methyltransferase GT347_12645 PF00570 HRDC domain GT347_12645 PF16124 RecQ zinc-binding GT347_12645 PF09382 RQC domain GT347_12645 PF00270 DEAD/DEAH box helicase GT347_12645 PF00271 Helicase conserved C-terminal domain GT347_12655 PF07729 FCD domain GT347_12655 PF00392 Bacterial regulatory proteins, gntR family GT347_12660 PF03401 Tripartite tricarboxylate transporter family receptor GT347_12665 PF02423 Ornithine cyclodeaminase/mu-crystallin family GT347_12670 PF00384 Molybdopterin oxidoreductase GT347_12670 PF01568 Molydopterin dinucleotide binding domain GT347_12680 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain GT347_12680 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain GT347_12690 PF03466 LysR substrate binding domain GT347_12690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_12700 PF01613 Flavin reductase like domain GT347_12710 PF00196 Bacterial regulatory proteins, luxR family GT347_12710 PF00072 Response regulator receiver domain GT347_12715 PF00989 PAS fold GT347_12715 PF00512 His Kinase A (phospho-acceptor) domain GT347_12715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_12720 PF00795 Carbon-nitrogen hydrolase GT347_12735 PF08335 GlnD PII-uridylyltransferase GT347_12735 PF03710 Glutamate-ammonia ligase adenylyltransferase GT347_12740 PF05036 Sporulation related domain GT347_12740 PF03330 Lytic transglycolase GT347_12745 PF00970 Oxidoreductase FAD-binding domain GT347_12745 PF00175 Oxidoreductase NAD-binding domain GT347_12765 PF07804 HipA-like C-terminal domain GT347_12765 PF13657 HipA N-terminal domain GT347_12775 PF02607 B12 binding domain GT347_12775 PF02965 Vitamin B12 dependent methionine synthase, activation domain GT347_12775 PF00809 Pterin binding enzyme GT347_12775 PF02574 Homocysteine S-methyltransferase GT347_12775 PF02310 B12 binding domain GT347_12780 PF02678 Pirin GT347_12780 PF05726 Pirin C-terminal cupin domain GT347_12785 PF07804 HipA-like C-terminal domain GT347_12790 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GT347_12795 PF01253 Translation initiation factor SUI1 GT347_12800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GT347_12800 PF08447 PAS fold GT347_12800 PF13426 PAS domain GT347_12810 PF01471 Putative peptidoglycan binding domain GT347_12810 PF13401 AAA domain GT347_12830 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GT347_12830 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GT347_12835 PF02780 Transketolase, C-terminal domain GT347_12835 PF02779 Transketolase, pyrimidine binding domain GT347_12835 PF00456 Transketolase, thiamine diphosphate binding domain GT347_12845 PF04185 Phosphoesterase family GT347_12850 PF00483 Nucleotidyl transferase GT347_12855 PF00557 Metallopeptidase family M24 GT347_12855 PF05195 Aminopeptidase P, N-terminal domain GT347_12870 PF07690 Major Facilitator Superfamily GT347_12875 PF02872 5'-nucleotidase, C-terminal domain GT347_12875 PF00149 Calcineurin-like phosphoesterase GT347_12880 PF01515 Phosphate acetyl/butaryl transferase GT347_12880 PF00390 Malic enzyme, N-terminal domain GT347_12880 PF03949 Malic enzyme, NAD binding domain GT347_12895 PF00398 Ribosomal RNA adenine dimethylase GT347_12900 PF09312 SurA N-terminal domain GT347_12900 PF00639 PPIC-type PPIASE domain GT347_12905 PF04453 LPS transport system D GT347_12910 PF01636 Phosphotransferase enzyme family GT347_12915 PF04452 RNA methyltransferase GT347_12935 PF08241 Methyltransferase domain GT347_12940 PF00561 alpha/beta hydrolase fold GT347_12950 PF00106 short chain dehydrogenase GT347_12965 PF01380 SIS domain GT347_12965 PF00571 CBS domain GT347_12970 PF00999 Sodium/hydrogen exchanger family GT347_12970 PF02080 TrkA-C domain GT347_12970 PF02254 TrkA-N domain GT347_12975 PF00563 EAL domain GT347_12975 PF03707 Bacterial signalling protein N terminal repeat GT347_12975 PF00990 Diguanylate cyclase, GGDEF domain GT347_12980 PF10396 GTP-binding protein TrmE N-terminus GT347_12980 PF12631 MnmE helical domain GT347_12980 PF01926 50S ribosome-binding GTPase GT347_12985 PF14849 YidC periplasmic domain GT347_12985 PF02096 60Kd inner membrane protein GT347_12990 PF01809 Putative membrane protein insertion efficiency factor GT347_12995 PF00825 Ribonuclease P GT347_13000 PF00468 Ribosomal protein L34 GT347_13005 PF11638 DnaA N-terminal domain GT347_13005 PF08299 Bacterial dnaA protein helix-turn-helix GT347_13005 PF00308 Bacterial dnaA protein GT347_13010 PF00712 DNA polymerase III beta subunit, N-terminal domain GT347_13010 PF02767 DNA polymerase III beta subunit, central domain GT347_13010 PF02768 DNA polymerase III beta subunit, C-terminal domain GT347_13015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_13015 PF00204 DNA gyrase B GT347_13015 PF00986 DNA gyrase B subunit, carboxyl terminus GT347_13015 PF18053 DNA gyrase B subunit insert domain GT347_13015 PF01751 Toprim domain GT347_13020 PF05229 Spore Coat Protein U domain GT347_13045 PF00795 Carbon-nitrogen hydrolase GT347_13045 PF02540 NAD synthase GT347_13055 PF08240 Alcohol dehydrogenase GroES-like domain GT347_13055 PF00107 Zinc-binding dehydrogenase GT347_13065 PF01545 Cation efflux family GT347_13065 PF16916 Dimerisation domain of Zinc Transporter GT347_13070 PF00155 Aminotransferase class I and II GT347_13070 PF00392 Bacterial regulatory proteins, gntR family GT347_13075 PF00202 Aminotransferase class-III GT347_13080 PF00171 Aldehyde dehydrogenase family GT347_13090 PF00403 Heavy-metal-associated domain GT347_13095 PF04381 Putative exonuclease, RdgC GT347_13115 PF03372 Endonuclease/Exonuclease/phosphatase family GT347_13120 PF13091 PLD-like domain GT347_13125 PF03706 Lysylphosphatidylglycerol synthase TM region GT347_13135 PF03167 Uracil DNA glycosylase superfamily GT347_13150 PF03466 LysR substrate binding domain GT347_13150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_13155 PF03401 Tripartite tricarboxylate transporter family receptor GT347_13160 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GT347_13160 PF13378 Enolase C-terminal domain-like GT347_13165 PF03401 Tripartite tricarboxylate transporter family receptor GT347_13170 PF00682 HMGL-like GT347_13175 PF02515 CoA-transferase family III GT347_13180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_13180 PF03466 LysR substrate binding domain GT347_13185 PF01381 Helix-turn-helix GT347_13195 PF00149 Calcineurin-like phosphoesterase GT347_13200 PF07690 Major Facilitator Superfamily GT347_13205 PF13533 Biotin-lipoyl like GT347_13210 PF07690 Major Facilitator Superfamily GT347_13215 PF02321 Outer membrane efflux protein GT347_13220 PF00403 Heavy-metal-associated domain GT347_13225 PF00672 HAMP domain GT347_13225 PF02203 Tar ligand binding domain homologue GT347_13225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GT347_13235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_13235 PF03466 LysR substrate binding domain GT347_13240 PF01565 FAD binding domain GT347_13240 PF02913 FAD linked oxidases, C-terminal domain GT347_13250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_13250 PF00512 His Kinase A (phospho-acceptor) domain GT347_13250 PF01627 Hpt domain GT347_13250 PF00072 Response regulator receiver domain GT347_13260 PF00563 EAL domain GT347_13260 PF13188 PAS domain GT347_13260 PF03707 Bacterial signalling protein N terminal repeat GT347_13260 PF00990 Diguanylate cyclase, GGDEF domain GT347_13275 PF00072 Response regulator receiver domain GT347_13275 PF04397 LytTr DNA-binding domain GT347_13280 PF17762 HTH domain found in ParB protein GT347_13280 PF02195 ParB-like nuclease domain GT347_13290 PF13614 AAA domain GT347_13295 PF02527 rRNA small subunit methyltransferase G GT347_13330 PF02798 Glutathione S-transferase, N-terminal domain GT347_13330 PF00043 Glutathione S-transferase, C-terminal domain GT347_13335 PF00005 ABC transporter GT347_13335 PF06472 ABC transporter transmembrane region 2 GT347_13340 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GT347_13355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_13355 PF00512 His Kinase A (phospho-acceptor) domain GT347_13360 PF00072 Response regulator receiver domain GT347_13360 PF00486 Transcriptional regulatory protein, C terminal GT347_13375 PF00873 AcrB/AcrD/AcrF family GT347_13395 PF02798 Glutathione S-transferase, N-terminal domain GT347_13400 PF00356 Bacterial regulatory proteins, lacI family GT347_13405 PF00356 Bacterial regulatory proteins, lacI family GT347_13410 PF13545 Crp-like helix-turn-helix domain GT347_13410 PF00027 Cyclic nucleotide-binding domain GT347_13415 PF00501 AMP-binding enzyme GT347_13420 PF00005 ABC transporter GT347_13420 PF12399 Branched-chain amino acid ATP-binding cassette transporter GT347_13425 PF02653 Branched-chain amino acid transport system / permease component GT347_13440 PF00005 ABC transporter GT347_13455 PF00990 Diguanylate cyclase, GGDEF domain GT347_13455 PF17151 Periplasmic sensor domain GT347_13460 PF03775 Septum formation inhibitor MinC, C-terminal domain GT347_13460 PF05209 Septum formation inhibitor MinC, N-terminal domain GT347_13465 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain GT347_13470 PF03776 Septum formation topological specificity factor MinE GT347_13485 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family GT347_13500 PF00814 Glycoprotease family GT347_13505 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family GT347_13515 PF01300 Telomere recombination GT347_13515 PF03481 Putative GTP-binding controlling metal-binding GT347_13520 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain GT347_13520 PF02222 ATP-grasp domain GT347_13525 PF00731 AIR carboxylase GT347_13530 PF00085 Thioredoxin GT347_13535 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GT347_13540 PF13609 Gram-negative porin GT347_13545 PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX GT347_13550 PF03062 MBOAT, membrane-bound O-acyltransferase family GT347_13565 PF13181 Tetratricopeptide repeat GT347_13565 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) GT347_13570 PF01270 Glycosyl hydrolases family 8 GT347_13575 PF13181 Tetratricopeptide repeat GT347_13575 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) GT347_13580 PF03170 Bacterial cellulose synthase subunit GT347_13585 PF00535 Glycosyl transferase family 2 GT347_13585 PF03552 Cellulose synthase GT347_13585 PF07238 PilZ domain GT347_13590 PF13614 AAA domain GT347_13605 PF05977 Transmembrane secretion effector GT347_13625 PF01116 Fructose-bisphosphate aldolase class-II GT347_13635 PF01259 SAICAR synthetase GT347_13640 PF00665 Integrase core domain GT347_13650 PF01131 DNA topoisomerase GT347_13650 PF01751 Toprim domain GT347_13660 PF03099 Biotin/lipoate A/B protein ligase family GT347_13660 PF08279 HTH domain GT347_13660 PF02237 Biotin protein ligase C terminal domain GT347_13680 PF03401 Tripartite tricarboxylate transporter family receptor GT347_13685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_13685 PF03466 LysR substrate binding domain GT347_13690 PF08521 Two-component sensor kinase N-terminal GT347_13690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_13690 PF00512 His Kinase A (phospho-acceptor) domain GT347_13695 PF00072 Response regulator receiver domain GT347_13695 PF00486 Transcriptional regulatory protein, C terminal GT347_13705 PF00990 Diguanylate cyclase, GGDEF domain GT347_13705 PF01590 GAF domain GT347_13705 PF00563 EAL domain GT347_13705 PF00360 Phytochrome region GT347_13715 PF01425 Amidase GT347_13725 PF00561 alpha/beta hydrolase fold GT347_13735 PF00154 recA bacterial DNA recombination protein GT347_13740 PF02631 RecX family GT347_13750 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GT347_13755 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GT347_13760 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GT347_13760 PF00005 ABC transporter GT347_13765 PF00528 Binding-protein-dependent transport system inner membrane component GT347_13765 PF12911 N-terminal TM domain of oligopeptide transport permease C GT347_13770 PF00528 Binding-protein-dependent transport system inner membrane component GT347_13785 PF01522 Polysaccharide deacetylase GT347_13795 PF01872 RibD C-terminal domain GT347_13795 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GT347_13805 PF02566 OsmC-like protein GT347_13820 PF01037 Lrp/AsnC ligand binding domain GT347_13840 PF07722 Peptidase C26 GT347_13875 PF02245 Methylpurine-DNA glycosylase (MPG) GT347_13880 PF03401 Tripartite tricarboxylate transporter family receptor GT347_13885 PF02515 CoA-transferase family III GT347_13900 PF01118 Semialdehyde dehydrogenase, NAD binding domain GT347_13905 PF08442 ATP-grasp domain GT347_13905 PF00549 CoA-ligase GT347_13910 PF00549 CoA-ligase GT347_13910 PF02629 CoA binding domain GT347_13915 PF03741 Integral membrane protein TerC family GT347_13925 PF12773 Double zinc ribbon GT347_13925 PF00498 FHA domain GT347_13930 PF00211 Adenylate and Guanylate cyclase catalytic domain GT347_13940 PF00114 Pilin (bacterial filament) GT347_13940 PF07963 Prokaryotic N-terminal methylation motif GT347_13965 PF01435 Peptidase family M48 GT347_13970 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV GT347_13980 PF03741 Integral membrane protein TerC family GT347_13990 PF07152 YaeQ protein GT347_13995 PF08328 Adenylosuccinate lyase C-terminal GT347_13995 PF00206 Lyase GT347_14000 PF00043 Glutathione S-transferase, C-terminal domain GT347_14000 PF13417 Glutathione S-transferase, N-terminal domain GT347_14020 PF00255 Glutathione peroxidase GT347_14035 PF00873 AcrB/AcrD/AcrF family GT347_14045 PF02321 Outer membrane efflux protein GT347_14060 PF03466 LysR substrate binding domain GT347_14060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_14065 PF00795 Carbon-nitrogen hydrolase GT347_14070 PF00291 Pyridoxal-phosphate dependent enzyme GT347_14075 PF03401 Tripartite tricarboxylate transporter family receptor GT347_14080 PF07969 Amidohydrolase family GT347_14085 PF13335 Magnesium chelatase, subunit ChlI C-terminal GT347_14085 PF01078 Magnesium chelatase, subunit ChlI GT347_14095 PF00543 Nitrogen regulatory protein P-II GT347_14100 PF00909 Ammonium Transporter Family GT347_14105 PF08450 SMP-30/Gluconolactonase/LRE-like region GT347_14110 PF01565 FAD binding domain GT347_14120 PF13183 4Fe-4S dicluster domain GT347_14120 PF02754 Cysteine-rich domain GT347_14135 PF07690 Major Facilitator Superfamily GT347_14145 PF00464 Serine hydroxymethyltransferase GT347_14155 PF07670 Nucleoside recognition GT347_14160 PF00364 Biotin-requiring enzyme GT347_14160 PF00561 alpha/beta hydrolase fold GT347_14165 PF03401 Tripartite tricarboxylate transporter family receptor GT347_14175 PF18073 Rubredoxin metal binding domain GT347_14190 PF01063 Amino-transferase class IV GT347_14205 PF00535 Glycosyl transferase family 2 GT347_14225 PF00672 HAMP domain GT347_14225 PF00512 His Kinase A (phospho-acceptor) domain GT347_14225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_14230 PF00486 Transcriptional regulatory protein, C terminal GT347_14230 PF00072 Response regulator receiver domain GT347_14235 PF07690 Major Facilitator Superfamily GT347_14240 PF07729 FCD domain GT347_14240 PF00392 Bacterial regulatory proteins, gntR family GT347_14270 PF03372 Endonuclease/Exonuclease/phosphatase family GT347_14275 PF00156 Phosphoribosyl transferase domain GT347_14300 PF02934 GatB/GatE catalytic domain GT347_14300 PF02637 GatB domain GT347_14305 PF01425 Amidase GT347_14310 PF02686 Glu-tRNAGln amidotransferase C subunit GT347_14320 PF04085 rod shape-determining protein MreC GT347_14330 PF00905 Penicillin binding protein transpeptidase domain GT347_14330 PF03717 Penicillin-binding Protein dimerisation domain GT347_14335 PF00425 chorismate binding enzyme GT347_14335 PF04715 Anthranilate synthase component I, N terminal region GT347_14340 PF00909 Ammonium Transporter Family GT347_14350 PF02405 Permease MlaE GT347_14355 PF00005 ABC transporter GT347_14370 PF01738 Dienelactone hydrolase family GT347_14375 PF01544 CorA-like Mg2+ transporter protein GT347_14380 PF00490 Delta-aminolevulinic acid dehydratase GT347_14400 PF02129 X-Pro dipeptidyl-peptidase (S15 family) GT347_14405 PF00768 D-alanyl-D-alanine carboxypeptidase GT347_14405 PF07943 Penicillin-binding protein 5, C-terminal domain GT347_14410 PF00164 Ribosomal protein S12/S23 GT347_14415 PF00177 Ribosomal protein S7p/S5e GT347_14420 PF14492 Elongation Factor G, domain II GT347_14420 PF03144 Elongation factor Tu domain 2 GT347_14420 PF00009 Elongation factor Tu GTP binding domain GT347_14420 PF03764 Elongation factor G, domain IV GT347_14420 PF00679 Elongation factor G C-terminus GT347_14425 PF00009 Elongation factor Tu GTP binding domain GT347_14425 PF03144 Elongation factor Tu domain 2 GT347_14425 PF03143 Elongation factor Tu C-terminal domain GT347_14430 PF00338 Ribosomal protein S10p/S20e GT347_14435 PF00297 Ribosomal protein L3 GT347_14440 PF00573 Ribosomal protein L4/L1 family GT347_14445 PF00276 Ribosomal protein L23 GT347_14450 PF03947 Ribosomal Proteins L2, C-terminal domain GT347_14450 PF00181 Ribosomal Proteins L2, RNA binding domain GT347_14455 PF00203 Ribosomal protein S19 GT347_14460 PF00237 Ribosomal protein L22p/L17e GT347_14465 PF07650 KH domain GT347_14465 PF00189 Ribosomal protein S3, C-terminal domain GT347_14470 PF00252 Ribosomal protein L16p/L10e GT347_14475 PF00831 Ribosomal L29 protein GT347_14480 PF00366 Ribosomal protein S17 GT347_14485 PF00462 Glutaredoxin GT347_14485 PF08534 Redoxin GT347_14495 PF00578 AhpC/TSA family GT347_14510 PF00381 PTS HPr component phosphorylation site GT347_14515 PF05524 PEP-utilising enzyme, N-terminal GT347_14515 PF00391 PEP-utilising enzyme, mobile domain GT347_14515 PF02896 PEP-utilising enzyme, TIM barrel domain GT347_14525 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family GT347_14525 PF04055 Radical SAM superfamily GT347_14530 PF03099 Biotin/lipoate A/B protein ligase family GT347_14535 PF04359 Protein of unknown function (DUF493) GT347_14540 PF12706 Beta-lactamase superfamily domain GT347_14550 PF00119 ATP synthase A chain GT347_14555 PF00137 ATP synthase subunit C GT347_14560 PF00430 ATP synthase B/B' CF(0) GT347_14565 PF00213 ATP synthase delta (OSCP) subunit GT347_14570 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GT347_14570 PF00306 ATP synthase alpha/beta chain, C terminal domain GT347_14570 PF02874 ATP synthase alpha/beta family, beta-barrel domain GT347_14575 PF00231 ATP synthase GT347_14580 PF02874 ATP synthase alpha/beta family, beta-barrel domain GT347_14580 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GT347_14585 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain GT347_14595 PF01068 ATP dependent DNA ligase domain GT347_14595 PF04675 DNA ligase N terminus GT347_14595 PF04679 ATP dependent DNA ligase C terminal region GT347_14600 PF04675 DNA ligase N terminus GT347_14600 PF01068 ATP dependent DNA ligase domain GT347_14600 PF04679 ATP dependent DNA ligase C terminal region GT347_14610 PF00270 DEAD/DEAH box helicase GT347_14610 PF08494 DEAD/H associated GT347_14610 PF00271 Helicase conserved C-terminal domain GT347_14660 PF13439 Glycosyltransferase Family 4 GT347_14660 PF00534 Glycosyl transferases group 1 GT347_14665 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GT347_14670 PF02321 Outer membrane efflux protein GT347_14675 PF00873 AcrB/AcrD/AcrF family GT347_14680 PF00529 HlyD membrane-fusion protein of T1SS GT347_14680 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GT347_14685 PF00440 Bacterial regulatory proteins, tetR family GT347_14685 PF08361 MAATS-type transcriptional repressor, C-terminal region GT347_14695 PF03466 LysR substrate binding domain GT347_14695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_14700 PF03401 Tripartite tricarboxylate transporter family receptor GT347_14710 PF01425 Amidase GT347_14720 PF02492 CobW/HypB/UreG, nucleotide-binding domain GT347_14720 PF07683 Cobalamin synthesis protein cobW C-terminal domain GT347_14725 PF02979 Nitrile hydratase, alpha chain GT347_14730 PF02211 Nitrile hydratase beta subunit GT347_14740 PF03401 Tripartite tricarboxylate transporter family receptor GT347_14745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_14745 PF03466 LysR substrate binding domain GT347_14750 PF03060 Nitronate monooxygenase GT347_14760 PF00474 Sodium:solute symporter family GT347_14765 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GT347_14765 PF00529 HlyD membrane-fusion protein of T1SS GT347_14770 PF00873 AcrB/AcrD/AcrF family GT347_14775 PF02321 Outer membrane efflux protein GT347_14785 PF00551 Formyl transferase GT347_14790 PF13360 PQQ-like domain GT347_14790 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GT347_14810 PF04262 Glutamate-cysteine ligase GT347_14810 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GT347_14810 PF18419 ATP-grasp-like domain GT347_14925 PF04542 Sigma-70 region 2 GT347_14925 PF04545 Sigma-70, region 4 GT347_14925 PF04539 Sigma-70 region 3 GT347_14930 PF00813 FliP family GT347_14940 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GT347_14950 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GT347_14950 PF00460 Flagella basal body rod protein GT347_14950 PF07559 Flagellar basal body protein FlaE GT347_14955 PF03963 Flagellar hook capping protein - N-terminal region GT347_14970 PF02874 ATP synthase alpha/beta family, beta-barrel domain GT347_14970 PF18269 T3SS EscN ATPase C-terminal domain GT347_14970 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GT347_14985 PF08345 Flagellar M-ring protein C-terminal GT347_14985 PF01514 Secretory protein of YscJ/FliF family GT347_14990 PF02049 Flagellar hook-basal body complex protein FliE GT347_14995 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GT347_14995 PF00460 Flagella basal body rod protein GT347_15000 PF00460 Flagella basal body rod protein GT347_15005 PF02119 Flagellar P-ring protein GT347_15010 PF02107 Flagellar L-ring protein GT347_15020 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GT347_15020 PF00460 Flagella basal body rod protein GT347_15025 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GT347_15025 PF00460 Flagella basal body rod protein GT347_15030 PF00771 FHIPEP family GT347_15035 PF01312 FlhB HrpN YscU SpaS Family GT347_15040 PF01311 Bacterial export proteins, family 1 GT347_15045 PF01313 Bacterial export proteins, family 3 GT347_15125 PF13173 AAA domain GT347_15125 PF13635 Domain of unknown function (DUF4143) GT347_15130 PF01702 Queuine tRNA-ribosyltransferase GT347_15140 PF02547 Queuosine biosynthesis protein GT347_15145 PF00270 DEAD/DEAH box helicase GT347_15145 PF00271 Helicase conserved C-terminal domain GT347_15145 PF17191 RecG wedge domain GT347_15155 PF03466 LysR substrate binding domain GT347_15155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_15160 PF00210 Ferritin-like domain GT347_15165 PF01040 UbiA prenyltransferase family GT347_15170 PF14748 Pyrroline-5-carboxylate reductase dimerisation GT347_15170 PF03807 NADP oxidoreductase coenzyme F420-dependent GT347_15175 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GT347_15175 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GT347_15180 PF08220 DeoR-like helix-turn-helix domain GT347_15180 PF00455 DeoR C terminal sensor domain GT347_15185 PF00005 ABC transporter GT347_15185 PF17912 MalK OB fold domain GT347_15190 PF00005 ABC transporter GT347_15190 PF17912 MalK OB fold domain GT347_15195 PF00528 Binding-protein-dependent transport system inner membrane component GT347_15200 PF00528 Binding-protein-dependent transport system inner membrane component GT347_15215 PF01266 FAD dependent oxidoreductase GT347_15215 PF16901 C-terminal domain of alpha-glycerophosphate oxidase GT347_15220 PF00238 Ribosomal protein L14p/L23e GT347_15225 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 GT347_15225 PF00467 KOW motif GT347_15230 PF00673 ribosomal L5P family C-terminus GT347_15230 PF00281 Ribosomal protein L5 GT347_15235 PF00253 Ribosomal protein S14p/S29e GT347_15240 PF00410 Ribosomal protein S8 GT347_15245 PF00347 Ribosomal protein L6 GT347_15250 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast GT347_15260 PF00327 Ribosomal protein L30p/L7e GT347_15265 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A GT347_15275 PF00444 Ribosomal protein L36 GT347_15280 PF00416 Ribosomal protein S13/S18 GT347_15285 PF00411 Ribosomal protein S11 GT347_15290 PF01479 S4 domain GT347_15290 PF00163 Ribosomal protein S4/S9 N-terminal domain GT347_15295 PF01000 RNA polymerase Rpb3/RpoA insert domain GT347_15295 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain GT347_15295 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain GT347_15300 PF01196 Ribosomal protein L17 GT347_15310 PF07729 FCD domain GT347_15310 PF00392 Bacterial regulatory proteins, gntR family GT347_15315 PF03401 Tripartite tricarboxylate transporter family receptor GT347_15320 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GT347_15320 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GT347_15325 PF01042 Endoribonuclease L-PSP GT347_15330 PF00596 Class II Aldolase and Adducin N-terminal domain GT347_15335 PF00596 Class II Aldolase and Adducin N-terminal domain GT347_15345 PF03401 Tripartite tricarboxylate transporter family receptor GT347_15350 PF08671 Anti-repressor SinI GT347_15350 PF01381 Helix-turn-helix GT347_15360 PF00005 ABC transporter GT347_15360 PF03459 TOBE domain GT347_15370 PF00528 Binding-protein-dependent transport system inner membrane component GT347_15375 PF02659 Putative manganese efflux pump GT347_15410 PF00708 Acylphosphatase GT347_15430 PF00149 Calcineurin-like phosphoesterase GT347_15430 PF12320 Type 5 capsule protein repressor C-terminal domain GT347_15440 PF00665 Integrase core domain GT347_15445 PF00440 Bacterial regulatory proteins, tetR family GT347_15445 PF08362 YcdC-like protein, C-terminal region GT347_15450 PF03171 2OG-Fe(II) oxygenase superfamily GT347_15450 PF14226 non-haem dioxygenase in morphine synthesis N-terminal GT347_15465 PF00005 ABC transporter GT347_15490 PF03328 HpcH/HpaI aldolase/citrate lyase family GT347_15495 PF03401 Tripartite tricarboxylate transporter family receptor GT347_15500 PF00356 Bacterial regulatory proteins, lacI family GT347_15510 PF00815 Histidinol dehydrogenase GT347_15515 PF07927 HicA toxin of bacterial toxin-antitoxin, GT347_15520 PF01381 Helix-turn-helix GT347_15520 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system GT347_15540 PF01799 [2Fe-2S] binding domain GT347_15540 PF00111 2Fe-2S iron-sulfur cluster binding domain GT347_15545 PF03450 CO dehydrogenase flavoprotein C-terminal domain GT347_15545 PF00941 FAD binding domain in molybdopterin dehydrogenase GT347_15550 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain GT347_15550 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase GT347_15555 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GT347_15555 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GT347_15560 PF00920 Dehydratase family GT347_15565 PF03401 Tripartite tricarboxylate transporter family receptor GT347_15570 PF03401 Tripartite tricarboxylate transporter family receptor GT347_15575 PF03737 Aldolase/RraA GT347_15580 PF03401 Tripartite tricarboxylate transporter family receptor GT347_15585 PF00665 Integrase core domain GT347_15590 PF00665 Integrase core domain GT347_15595 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GT347_15595 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GT347_15600 PF00710 Asparaginase, N-terminal GT347_15600 PF17763 Glutaminase/Asparaginase C-terminal domain GT347_15605 PF02091 Glycyl-tRNA synthetase alpha subunit GT347_15610 PF02092 Glycyl-tRNA synthetase beta subunit GT347_15610 PF05746 DALR anticodon binding domain GT347_15645 PF00376 MerR family regulatory protein GT347_15645 PF09278 MerR, DNA binding GT347_15650 PF00484 Carbonic anhydrase GT347_15655 PF00108 Thiolase, N-terminal domain GT347_15655 PF02803 Thiolase, C-terminal domain GT347_15660 PF05860 haemagglutination activity domain GT347_15660 PF13332 Hemagglutinin repeat GT347_15660 PF13018 Extended Signal Peptide of Type V secretion system GT347_15660 PF04829 Pre-toxin domain with VENN motif GT347_15670 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GT347_15685 PF13419 Haloacid dehalogenase-like hydrolase GT347_15695 PF01964 Radical SAM ThiC family GT347_15695 PF13667 ThiC-associated domain GT347_15700 PF01266 FAD dependent oxidoreductase GT347_15710 PF05690 Thiazole biosynthesis protein ThiG GT347_15715 PF08543 Phosphomethylpyrimidine kinase GT347_15760 PF02770 Acyl-CoA dehydrogenase, middle domain GT347_15760 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GT347_15760 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GT347_15765 PF01039 Carboxyl transferase domain GT347_15770 PF00378 Enoyl-CoA hydratase/isomerase GT347_15850 PF00682 HMGL-like GT347_15880 PF08946 Osmosensory transporter coiled coil GT347_15880 PF00083 Sugar (and other) transporter GT347_15890 PF03466 LysR substrate binding domain GT347_15890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_15895 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GT347_15900 PF07731 Multicopper oxidase GT347_15900 PF07732 Multicopper oxidase GT347_15900 PF00394 Multicopper oxidase GT347_15905 PF05275 Copper resistance protein B precursor (CopB) GT347_15910 PF04234 CopC domain GT347_15950 PF17762 HTH domain found in ParB protein GT347_15950 PF02195 ParB-like nuclease domain GT347_16020 PF07516 SecA Wing and Scaffold domain GT347_16020 PF01043 SecA preprotein cross-linking domain GT347_16020 PF07517 SecA DEAD-like domain GT347_16020 PF02810 SEC-C motif GT347_16040 PF03354 Phage Terminase GT347_16160 PF11798 IMS family HHH motif GT347_16160 PF13438 Domain of unknown function (DUF4113) GT347_16160 PF11799 impB/mucB/samB family C-terminal domain GT347_16160 PF00817 impB/mucB/samB family GT347_16165 PF00717 Peptidase S24-like GT347_16215 PF01434 Peptidase family M41 GT347_16215 PF17862 AAA+ lid domain GT347_16215 PF00004 ATPase family associated with various cellular activities (AAA) GT347_16220 PF00034 Cytochrome c GT347_16240 PF01144 Coenzyme A transferase GT347_16245 PF01144 Coenzyme A transferase GT347_16250 PF02803 Thiolase, C-terminal domain GT347_16250 PF00108 Thiolase, N-terminal domain GT347_16260 PF03401 Tripartite tricarboxylate transporter family receptor GT347_16265 PF00881 Nitroreductase family GT347_16275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_16275 PF03466 LysR substrate binding domain GT347_16280 PF00588 SpoU rRNA Methylase family GT347_16295 PF08241 Methyltransferase domain GT347_16305 PF02790 Cytochrome C oxidase subunit II, transmembrane domain GT347_16305 PF00116 Cytochrome C oxidase subunit II, periplasmic domain GT347_16310 PF00115 Cytochrome C and Quinol oxidase polypeptide I GT347_16315 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 GT347_16325 PF00510 Cytochrome c oxidase subunit III GT347_16345 PF02628 Cytochrome oxidase assembly protein GT347_16350 PF01040 UbiA prenyltransferase family GT347_16355 PF02630 SCO1/SenC GT347_16360 PF03401 Tripartite tricarboxylate transporter family receptor GT347_16365 PF00140 Sigma-70 factor, region 1.2 GT347_16365 PF04542 Sigma-70 region 2 GT347_16365 PF04545 Sigma-70, region 4 GT347_16370 PF02881 SRP54-type protein, helical bundle domain GT347_16370 PF00448 SRP54-type protein, GTPase domain GT347_16375 PF05193 Peptidase M16 inactive domain GT347_16375 PF00675 Insulinase (Peptidase family M16) GT347_16390 PF01467 Cytidylyltransferase-like GT347_16395 PF15887 Putative zinc-binding metallo-peptidase GT347_16395 PF10005 zinc-ribbon domain GT347_16430 PF17200 Single Cache domain 2 GT347_16430 PF07730 Histidine kinase GT347_16435 PF00196 Bacterial regulatory proteins, luxR family GT347_16435 PF00072 Response regulator receiver domain GT347_16450 PF05170 AsmA family GT347_16455 PF00899 ThiF family GT347_16460 PF13180 PDZ domain GT347_16460 PF03572 Peptidase family S41 GT347_16465 PF00300 Histidine phosphatase superfamily (branch 1) GT347_16470 PF00581 Rhodanese-like domain GT347_16475 PF00462 Glutaredoxin GT347_16480 PF02556 Preprotein translocase subunit SecB GT347_16485 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus GT347_16485 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus GT347_16490 PF14693 Ribosomal protein TL5, C-terminal domain GT347_16490 PF01386 Ribosomal L25p family GT347_16495 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase GT347_16495 PF14572 Phosphoribosyl synthetase-associated domain GT347_16505 PF08544 GHMP kinases C terminal GT347_16505 PF00288 GHMP kinases N terminal domain GT347_16510 PF03550 Outer membrane lipoprotein LolB GT347_16520 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain GT347_16520 PF06827 Zinc finger found in FPG and IleRS GT347_16520 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain GT347_16530 PF14815 NUDIX domain GT347_16530 PF00633 Helix-hairpin-helix motif GT347_16530 PF00730 HhH-GPD superfamily base excision DNA repair protein GT347_16530 PF10576 Iron-sulfur binding domain of endonuclease III GT347_16535 PF03668 P-loop ATPase protein family GT347_16540 PF02463 RecF/RecN/SMC N terminal domain GT347_16545 PF01513 ATP-NAD kinase GT347_16550 PF01628 HrcA protein C terminal domain GT347_16550 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding GT347_16555 PF03466 LysR substrate binding domain GT347_16555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_16560 PF00171 Aldehyde dehydrogenase family GT347_16565 PF00378 Enoyl-CoA hydratase/isomerase GT347_16570 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GT347_16570 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GT347_16575 PF00378 Enoyl-CoA hydratase/isomerase GT347_16580 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GT347_16580 PF02770 Acyl-CoA dehydrogenase, middle domain GT347_16580 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GT347_16585 PF05145 Transition state regulatory protein AbrB GT347_16605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_16605 PF03466 LysR substrate binding domain GT347_16610 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GT347_16620 PF00155 Aminotransferase class I and II GT347_16630 PF00497 Bacterial extracellular solute-binding proteins, family 3 GT347_16635 PF00528 Binding-protein-dependent transport system inner membrane component GT347_16640 PF00005 ABC transporter GT347_16645 PF07687 Peptidase dimerisation domain GT347_16645 PF01546 Peptidase family M20/M25/M40 GT347_16655 PF01321 Creatinase/Prolidase N-terminal domain GT347_16655 PF00557 Metallopeptidase family M24 GT347_16670 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GT347_16670 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GT347_16670 PF01842 ACT domain GT347_16675 PF01546 Peptidase family M20/M25/M40 GT347_16675 PF07687 Peptidase dimerisation domain GT347_16680 PF00005 ABC transporter GT347_16680 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GT347_16685 PF12911 N-terminal TM domain of oligopeptide transport permease C GT347_16685 PF00528 Binding-protein-dependent transport system inner membrane component GT347_16690 PF00528 Binding-protein-dependent transport system inner membrane component GT347_16695 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GT347_16705 PF00528 Binding-protein-dependent transport system inner membrane component GT347_16710 PF00005 ABC transporter GT347_16710 PF08402 TOBE domain GT347_16715 PF07729 FCD domain GT347_16715 PF00392 Bacterial regulatory proteins, gntR family GT347_16720 PF07969 Amidohydrolase family GT347_16725 PF03746 LamB/YcsF family GT347_16730 PF02626 Carboxyltransferase domain, subdomain A and B GT347_16735 PF02682 Carboxyltransferase domain, subdomain C and D GT347_16740 PF00155 Aminotransferase class I and II GT347_16750 PF01979 Amidohydrolase family GT347_16760 PF12399 Branched-chain amino acid ATP-binding cassette transporter GT347_16760 PF00005 ABC transporter GT347_16765 PF02653 Branched-chain amino acid transport system / permease component GT347_16765 PF11862 Domain of unknown function (DUF3382) GT347_16770 PF02653 Branched-chain amino acid transport system / permease component GT347_16775 PF13458 Periplasmic binding protein GT347_16785 PF05544 Proline racemase GT347_16790 PF00701 Dihydrodipicolinate synthetase family GT347_16795 PF07729 FCD domain GT347_16795 PF00392 Bacterial regulatory proteins, gntR family GT347_16820 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GT347_16820 PF00034 Cytochrome c GT347_16820 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase GT347_16825 PF01799 [2Fe-2S] binding domain GT347_16825 PF00111 2Fe-2S iron-sulfur cluster binding domain GT347_16830 PF00857 Isochorismatase family GT347_16835 PF00005 ABC transporter GT347_16840 PF00005 ABC transporter GT347_16840 PF12399 Branched-chain amino acid ATP-binding cassette transporter GT347_16850 PF13458 Periplasmic binding protein GT347_16855 PF01494 FAD binding domain GT347_16870 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GT347_16870 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GT347_16875 PF00294 pfkB family carbohydrate kinase GT347_16885 PF00005 ABC transporter GT347_16900 PF00528 Binding-protein-dependent transport system inner membrane component GT347_16915 PF03401 Tripartite tricarboxylate transporter family receptor GT347_16920 PF04209 homogentisate 1,2-dioxygenase GT347_16925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_16925 PF03466 LysR substrate binding domain GT347_16930 PF03401 Tripartite tricarboxylate transporter family receptor GT347_16935 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain GT347_16935 PF02129 X-Pro dipeptidyl-peptidase (S15 family) GT347_16940 PF00892 EamA-like transporter family GT347_16945 PF00512 His Kinase A (phospho-acceptor) domain GT347_16945 PF00072 Response regulator receiver domain GT347_16945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_16945 PF08448 PAS fold GT347_16945 PF13188 PAS domain GT347_16950 PF00384 Molybdopterin oxidoreductase GT347_16955 PF00816 H-NS histone family GT347_16965 PF00873 AcrB/AcrD/AcrF family GT347_16970 PF02321 Outer membrane efflux protein GT347_16980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_16980 PF00512 His Kinase A (phospho-acceptor) domain GT347_16980 PF07689 KaiB domain GT347_16985 PF00141 Peroxidase GT347_17000 PF00300 Histidine phosphatase superfamily (branch 1) GT347_17005 PF02627 Carboxymuconolactone decarboxylase family GT347_17010 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GT347_17010 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GT347_17025 PF00106 short chain dehydrogenase GT347_17040 PF12399 Branched-chain amino acid ATP-binding cassette transporter GT347_17040 PF00005 ABC transporter GT347_17045 PF00005 ABC transporter GT347_17050 PF13458 Periplasmic binding protein GT347_17055 PF07729 FCD domain GT347_17055 PF00392 Bacterial regulatory proteins, gntR family GT347_17065 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GT347_17065 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GT347_17070 PF00753 Metallo-beta-lactamase superfamily GT347_17080 PF05199 GMC oxidoreductase GT347_17080 PF00732 GMC oxidoreductase GT347_17090 PF03401 Tripartite tricarboxylate transporter family receptor GT347_17095 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GT347_17095 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GT347_17100 PF05161 MOFRL family GT347_17100 PF13660 Domain of unknown function (DUF4147) GT347_17110 PF00982 Glycosyltransferase family 20 GT347_17115 PF00723 Glycosyl hydrolases family 15 GT347_17125 PF02358 Trehalose-phosphatase GT347_17135 PF13533 Biotin-lipoyl like GT347_17145 PF00873 AcrB/AcrD/AcrF family GT347_17150 PF02321 Outer membrane efflux protein GT347_17155 PF00553 Cellulose binding domain GT347_17155 PF00150 Cellulase (glycosyl hydrolase family 5) GT347_17170 PF17755 UvrA DNA-binding domain GT347_17170 PF00005 ABC transporter GT347_17170 PF17760 UvrA interaction domain GT347_17195 PF01743 Poly A polymerase head domain GT347_17195 PF01966 HD domain GT347_17195 PF12627 Probable RNA and SrmB- binding site of polymerase A GT347_17200 PF04397 LytTr DNA-binding domain GT347_17200 PF00072 Response regulator receiver domain GT347_17205 PF01812 5-formyltetrahydrofolate cyclo-ligase family GT347_17210 PF01551 Peptidase family M23 GT347_17210 PF10145 Phage-related minor tail protein GT347_17210 PF01464 Transglycosylase SLT domain GT347_17235 PF00571 CBS domain GT347_17235 PF03471 Transporter associated domain GT347_17240 PF00795 Carbon-nitrogen hydrolase GT347_17245 PF03401 Tripartite tricarboxylate transporter family receptor GT347_17255 PF00202 Aminotransferase class-III GT347_17270 PF01774 UreD urease accessory protein GT347_17280 PF00547 Urease, gamma subunit GT347_17290 PF00699 Urease beta subunit GT347_17295 PF01979 Amidohydrolase family GT347_17295 PF00449 Urease alpha-subunit, N-terminal domain GT347_17310 PF05194 UreE urease accessory protein, C-terminal domain GT347_17310 PF02814 UreE urease accessory protein, N-terminal domain GT347_17315 PF01730 UreF GT347_17320 PF02492 CobW/HypB/UreG, nucleotide-binding domain GT347_17330 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family GT347_17340 PF00892 EamA-like transporter family GT347_17360 PF00005 ABC transporter GT347_17360 PF02687 FtsX-like permease family GT347_17360 PF12704 MacB-like periplasmic core domain GT347_17370 PF02321 Outer membrane efflux protein GT347_17375 PF00072 Response regulator receiver domain GT347_17375 PF00486 Transcriptional regulatory protein, C terminal GT347_17380 PF00512 His Kinase A (phospho-acceptor) domain GT347_17380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_17380 PF00672 HAMP domain GT347_17400 PF00009 Elongation factor Tu GTP binding domain GT347_17400 PF03144 Elongation factor Tu domain 2 GT347_17400 PF16658 Class II release factor RF3, C-terminal domain GT347_17435 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain GT347_17435 PF05221 S-adenosyl-L-homocysteine hydrolase GT347_17440 PF01728 FtsJ-like methyltransferase GT347_17440 PF01479 S4 domain GT347_17445 PF02219 Methylenetetrahydrofolate reductase GT347_17450 PF03330 Lytic transglycolase GT347_17450 PF05036 Sporulation related domain GT347_17470 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ GT347_17475 PF00572 Ribosomal protein L13 GT347_17480 PF00380 Ribosomal protein S9/S16 GT347_17485 PF01521 Iron-sulphur cluster biosynthesis GT347_17490 PF07690 Major Facilitator Superfamily GT347_17495 PF03702 Anhydro-N-acetylmuramic acid kinase GT347_17500 PF01551 Peptidase family M23 GT347_17505 PF01479 S4 domain GT347_17505 PF00579 tRNA synthetases class I (W and Y) GT347_17510 PF03466 LysR substrate binding domain GT347_17510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_17540 PF00132 Bacterial transferase hexapeptide (six repeats) GT347_17540 PF12804 MobA-like NTP transferase domain GT347_17545 PF08446 PAS fold GT347_17545 PF00512 His Kinase A (phospho-acceptor) domain GT347_17545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_17545 PF00360 Phytochrome region GT347_17545 PF01590 GAF domain GT347_17555 PF01380 SIS domain GT347_17575 PF02371 Transposase IS116/IS110/IS902 family GT347_17575 PF01548 Transposase GT347_17610 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GT347_17610 PF00364 Biotin-requiring enzyme GT347_17610 PF00289 Biotin carboxylase, N-terminal domain GT347_17610 PF02785 Biotin carboxylase C-terminal domain GT347_17615 PF02682 Carboxyltransferase domain, subdomain C and D GT347_17635 PF00890 FAD binding domain GT347_17635 PF02910 Fumarate reductase flavoprotein C-term GT347_17640 PF02445 Quinolinate synthetase A protein GT347_17645 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain GT347_17645 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain GT347_17655 PF00005 ABC transporter GT347_17660 PF01063 Amino-transferase class IV GT347_17675 PF00528 Binding-protein-dependent transport system inner membrane component GT347_17685 PF00593 TonB dependent receptor GT347_17685 PF07715 TonB-dependent Receptor Plug Domain GT347_17690 PF00905 Penicillin binding protein transpeptidase domain GT347_17690 PF03717 Penicillin-binding Protein dimerisation domain GT347_17695 PF07702 UTRA domain GT347_17695 PF00392 Bacterial regulatory proteins, gntR family GT347_17705 PF00694 Aconitase C-terminal domain GT347_17710 PF00330 Aconitase family (aconitate hydratase) GT347_17715 PF07364 Metallopeptidase family M81 GT347_17715 PF07171 MlrC C-terminus GT347_17730 PF00005 ABC transporter GT347_17730 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GT347_17735 PF00005 ABC transporter GT347_17735 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GT347_17740 PF00528 Binding-protein-dependent transport system inner membrane component GT347_17745 PF00528 Binding-protein-dependent transport system inner membrane component GT347_17750 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GT347_17770 PF00881 Nitroreductase family GT347_17780 PF00196 Bacterial regulatory proteins, luxR family GT347_17780 PF00072 Response regulator receiver domain GT347_17785 PF05384 Sensor protein DegS GT347_17785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_17785 PF07730 Histidine kinase GT347_17805 PF07804 HipA-like C-terminal domain GT347_17805 PF13657 HipA N-terminal domain GT347_17815 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GT347_17815 PF01842 ACT domain GT347_17815 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GT347_17820 PF03401 Tripartite tricarboxylate transporter family receptor GT347_17825 PF01614 Bacterial transcriptional regulator GT347_17825 PF09339 IclR helix-turn-helix domain GT347_17830 PF03466 LysR substrate binding domain GT347_17830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_17840 PF00171 Aldehyde dehydrogenase family GT347_17845 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GT347_17845 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GT347_17850 PF03401 Tripartite tricarboxylate transporter family receptor GT347_17855 PF07687 Peptidase dimerisation domain GT347_17855 PF01546 Peptidase family M20/M25/M40 GT347_17865 PF03401 Tripartite tricarboxylate transporter family receptor GT347_17875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_17875 PF03466 LysR substrate binding domain GT347_17880 PF00528 Binding-protein-dependent transport system inner membrane component GT347_17885 PF00005 ABC transporter GT347_17895 PF01799 [2Fe-2S] binding domain GT347_17895 PF00111 2Fe-2S iron-sulfur cluster binding domain GT347_17900 PF00941 FAD binding domain in molybdopterin dehydrogenase GT347_17900 PF03450 CO dehydrogenase flavoprotein C-terminal domain GT347_17905 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase GT347_17905 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain GT347_17910 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GT347_17920 PF03480 Bacterial extracellular solute-binding protein, family 7 GT347_17925 PF00355 Rieske [2Fe-2S] domain GT347_17930 PF14759 Reductase C-terminal GT347_17930 PF07992 Pyridine nucleotide-disulphide oxidoreductase GT347_17935 PF00848 Ring hydroxylating alpha subunit (catalytic domain) GT347_17935 PF00355 Rieske [2Fe-2S] domain GT347_17945 PF01047 MarR family GT347_17955 PF17645 Arylmalonate decarboxylase GT347_17960 PF00561 alpha/beta hydrolase fold GT347_17970 PF00857 Isochorismatase family GT347_17995 PF00990 Diguanylate cyclase, GGDEF domain GT347_17995 PF08448 PAS fold GT347_17995 PF00563 EAL domain GT347_18000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_18000 PF03466 LysR substrate binding domain GT347_18010 PF03746 LamB/YcsF family GT347_18015 PF03466 LysR substrate binding domain GT347_18015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_18020 PF07286 Protein of unknown function (DUF1445) GT347_18025 PF13458 Periplasmic binding protein GT347_18030 PF02653 Branched-chain amino acid transport system / permease component GT347_18040 PF00005 ABC transporter GT347_18045 PF00005 ABC transporter GT347_18050 PF01266 FAD dependent oxidoreductase GT347_18055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_18055 PF03466 LysR substrate binding domain GT347_18065 PF06472 ABC transporter transmembrane region 2 GT347_18065 PF00005 ABC transporter GT347_18080 PF00528 Binding-protein-dependent transport system inner membrane component GT347_18085 PF08402 TOBE domain GT347_18085 PF00005 ABC transporter GT347_18090 PF00356 Bacterial regulatory proteins, lacI family GT347_18095 PF00149 Calcineurin-like phosphoesterase GT347_18145 PF04314 Copper chaperone PCu(A)C GT347_18160 PF01678 Diaminopimelate epimerase GT347_18170 PF00589 Phage integrase family GT347_18170 PF02899 Phage integrase, N-terminal SAM-like domain GT347_18175 PF10672 S-adenosylmethionine-dependent methyltransferase GT347_18175 PF17785 PUA-like domain GT347_18180 PF02492 CobW/HypB/UreG, nucleotide-binding domain GT347_18180 PF07683 Cobalamin synthesis protein cobW C-terminal domain GT347_18185 PF01258 Prokaryotic dksA/traR C4-type zinc finger GT347_18195 PF00227 Proteasome subunit GT347_18200 PF07724 AAA domain (Cdc48 subfamily) GT347_18200 PF00004 ATPase family associated with various cellular activities (AAA) GT347_18205 PF02381 MraZ protein, putative antitoxin-like GT347_18210 PF01795 MraW methylase family GT347_18220 PF00905 Penicillin binding protein transpeptidase domain GT347_18220 PF03717 Penicillin-binding Protein dimerisation domain GT347_18225 PF02875 Mur ligase family, glutamate ligase domain GT347_18225 PF08245 Mur ligase middle domain GT347_18230 PF08245 Mur ligase middle domain GT347_18230 PF02875 Mur ligase family, glutamate ligase domain GT347_18230 PF01225 Mur ligase family, catalytic domain GT347_18235 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 GT347_18235 PF00953 Glycosyl transferase family 4 GT347_18240 PF02875 Mur ligase family, glutamate ligase domain GT347_18240 PF08245 Mur ligase middle domain GT347_18245 PF01098 Cell cycle protein GT347_18255 PF08245 Mur ligase middle domain GT347_18255 PF01225 Mur ligase family, catalytic domain GT347_18255 PF02875 Mur ligase family, glutamate ligase domain GT347_18260 PF01820 D-ala D-ala ligase N-terminus GT347_18260 PF07478 D-ala D-ala ligase C-terminus GT347_18265 PF08478 POTRA domain, FtsQ-type GT347_18265 PF03799 Cell division protein FtsQ GT347_18270 PF02491 SHS2 domain inserted in FTSA GT347_18275 PF00091 Tubulin/FtsZ family, GTPase domain GT347_18275 PF12327 FtsZ family, C-terminal domain GT347_18290 PF02661 Fic/DOC family GT347_18290 PF12728 Helix-turn-helix domain GT347_18310 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase GT347_18345 PF00543 Nitrogen regulatory protein P-II GT347_18350 PF00873 AcrB/AcrD/AcrF family GT347_18355 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GT347_18370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_18370 PF00512 His Kinase A (phospho-acceptor) domain GT347_18370 PF09308 LuxQ, periplasmic GT347_18370 PF00072 Response regulator receiver domain GT347_18375 PF00072 Response regulator receiver domain GT347_18425 PF02653 Branched-chain amino acid transport system / permease component GT347_18430 PF02653 Branched-chain amino acid transport system / permease component GT347_18435 PF00005 ABC transporter GT347_18435 PF12399 Branched-chain amino acid ATP-binding cassette transporter GT347_18440 PF00005 ABC transporter GT347_18450 PF07690 Major Facilitator Superfamily GT347_18455 PF08668 HDOD domain GT347_18465 PF04349 Periplasmic glucan biosynthesis protein, MdoG GT347_18495 PF03171 2OG-Fe(II) oxygenase superfamily GT347_18495 PF14226 non-haem dioxygenase in morphine synthesis N-terminal GT347_18510 PF02075 Crossover junction endodeoxyribonuclease RuvC GT347_18520 PF00912 Transglycosylase GT347_18525 PF01488 Shikimate / quinate 5-dehydrogenase GT347_18525 PF18317 Shikimate 5'-dehydrogenase C-terminal domain GT347_18525 PF08501 Shikimate dehydrogenase substrate binding domain GT347_18540 PF05728 Uncharacterised protein family (UPF0227) GT347_18555 PF01098 Cell cycle protein GT347_18565 PF01523 Putative modulator of DNA gyrase GT347_18570 PF05643 Putative bacterial lipoprotein (DUF799) GT347_18580 PF03783 Curli production assembly/transport component CsgG GT347_18585 PF00793 DAHP synthetase I family GT347_18590 PF02875 Mur ligase family, glutamate ligase domain GT347_18590 PF08245 Mur ligase middle domain GT347_18590 PF01225 Mur ligase family, catalytic domain GT347_18600 PF00578 AhpC/TSA family GT347_18605 PF00364 Biotin-requiring enzyme GT347_18610 PF00289 Biotin carboxylase, N-terminal domain GT347_18610 PF02785 Biotin carboxylase C-terminal domain GT347_18610 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GT347_18625 PF00294 pfkB family carbohydrate kinase GT347_18635 PF00268 Ribonucleotide reductase, small chain GT347_18640 PF03477 ATP cone domain GT347_18640 PF02867 Ribonucleotide reductase, barrel domain GT347_18640 PF00317 Ribonucleotide reductase, all-alpha domain GT347_18650 PF00158 Sigma-54 interaction domain GT347_18650 PF00072 Response regulator receiver domain GT347_18650 PF02954 Bacterial regulatory protein, Fis family GT347_18655 PF00512 His Kinase A (phospho-acceptor) domain GT347_18655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_18670 PF02978 Signal peptide binding domain GT347_18670 PF02881 SRP54-type protein, helical bundle domain GT347_18670 PF00448 SRP54-type protein, GTPase domain GT347_18675 PF00535 Glycosyl transferase family 2 GT347_18680 PF00158 Sigma-54 interaction domain GT347_18680 PF00072 Response regulator receiver domain GT347_18695 PF04055 Radical SAM superfamily GT347_18695 PF00919 Uncharacterized protein family UPF0004 GT347_18695 PF01938 TRAM domain GT347_18710 PF00881 Nitroreductase family GT347_18720 PF03358 NADPH-dependent FMN reductase GT347_18725 PF07730 Histidine kinase GT347_18725 PF17200 Single Cache domain 2 GT347_18730 PF00196 Bacterial regulatory proteins, luxR family GT347_18730 PF00072 Response regulator receiver domain GT347_18735 PF00005 ABC transporter GT347_18740 PF00528 Binding-protein-dependent transport system inner membrane component GT347_18745 PF00005 ABC transporter GT347_18750 PF02560 Cyanate lyase C-terminal domain GT347_18755 PF03466 LysR substrate binding domain GT347_18755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_18760 PF03401 Tripartite tricarboxylate transporter family receptor GT347_18775 PF13361 UvrD-like helicase C-terminal domain GT347_18775 PF00580 UvrD/REP helicase N-terminal domain GT347_18780 PF00111 2Fe-2S iron-sulfur cluster binding domain GT347_18785 PF07859 alpha/beta hydrolase fold GT347_18790 PF00005 ABC transporter GT347_18795 PF00528 Binding-protein-dependent transport system inner membrane component GT347_18800 PF00355 Rieske [2Fe-2S] domain GT347_18805 PF00355 Rieske [2Fe-2S] domain GT347_18835 PF00528 Binding-protein-dependent transport system inner membrane component GT347_18840 PF00005 ABC transporter GT347_18865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_18865 PF03466 LysR substrate binding domain GT347_18870 PF03737 Aldolase/RraA GT347_18875 PF01425 Amidase GT347_18880 PF03401 Tripartite tricarboxylate transporter family receptor GT347_18885 PF05973 Phage derived protein Gp49-like (DUF891) GT347_18905 PF01515 Phosphate acetyl/butaryl transferase GT347_18905 PF03949 Malic enzyme, NAD binding domain GT347_18905 PF00390 Malic enzyme, N-terminal domain GT347_18920 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain GT347_18920 PF02706 Chain length determinant protein GT347_18920 PF13807 G-rich domain on putative tyrosine kinase GT347_18950 PF01522 Polysaccharide deacetylase GT347_18960 PF02397 Bacterial sugar transferase GT347_18965 PF03808 Glycosyl transferase WecB/TagA/CpsF family GT347_18970 PF00535 Glycosyl transferase family 2 GT347_18980 PF01152 Bacterial-like globin GT347_18985 PF00488 MutS domain V GT347_18985 PF01713 Smr domain GT347_18990 PF04002 RadC-like JAB domain GT347_18995 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GT347_19005 PF01380 SIS domain GT347_19005 PF00571 CBS domain GT347_19010 PF02403 Seryl-tRNA synthetase N-terminal domain GT347_19010 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GT347_19030 PF13823 Alcohol dehydrogenase GroES-associated GT347_19030 PF00107 Zinc-binding dehydrogenase GT347_19030 PF08240 Alcohol dehydrogenase GroES-like domain GT347_19035 PF03631 Virulence factor BrkB GT347_19040 PF01339 CheB methylesterase GT347_19040 PF03705 CheR methyltransferase, all-alpha domain GT347_19040 PF08448 PAS fold GT347_19040 PF01739 CheR methyltransferase, SAM binding domain GT347_19045 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GT347_19045 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GT347_19055 PF00694 Aconitase C-terminal domain GT347_19060 PF00330 Aconitase family (aconitate hydratase) GT347_19065 PF03401 Tripartite tricarboxylate transporter family receptor GT347_19070 PF03401 Tripartite tricarboxylate transporter family receptor GT347_19075 PF06506 Propionate catabolism activator GT347_19075 PF02954 Bacterial regulatory protein, Fis family GT347_19075 PF00158 Sigma-54 interaction domain GT347_19085 PF01965 DJ-1/PfpI family GT347_19105 PF00034 Cytochrome c GT347_19120 PF00392 Bacterial regulatory proteins, gntR family GT347_19120 PF07729 FCD domain GT347_19125 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GT347_19125 PF13378 Enolase C-terminal domain-like GT347_19130 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GT347_19130 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GT347_19135 PF03401 Tripartite tricarboxylate transporter family receptor GT347_19140 PF01740 STAS domain GT347_19140 PF08678 Rsbr N terminal GT347_19145 PF01740 STAS domain GT347_19150 PF13581 Histidine kinase-like ATPase domain GT347_19160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_19160 PF00512 His Kinase A (phospho-acceptor) domain GT347_19165 PF00512 His Kinase A (phospho-acceptor) domain GT347_19165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_19165 PF00072 Response regulator receiver domain GT347_19165 PF09308 LuxQ, periplasmic GT347_19170 PF00512 His Kinase A (phospho-acceptor) domain GT347_19170 PF00072 Response regulator receiver domain GT347_19170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_19170 PF01627 Hpt domain GT347_19175 PF00072 Response regulator receiver domain GT347_19180 PF01590 GAF domain GT347_19180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_19180 PF00512 His Kinase A (phospho-acceptor) domain GT347_19180 PF08446 PAS fold GT347_19180 PF00360 Phytochrome region GT347_19185 PF08240 Alcohol dehydrogenase GroES-like domain GT347_19185 PF00107 Zinc-binding dehydrogenase GT347_19190 PF07859 alpha/beta hydrolase fold GT347_19195 PF00877 NlpC/P60 family GT347_19210 PF03401 Tripartite tricarboxylate transporter family receptor GT347_19215 PF03641 Possible lysine decarboxylase GT347_19235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_19235 PF03466 LysR substrate binding domain GT347_19250 PF02417 Chromate transporter GT347_19255 PF04349 Periplasmic glucan biosynthesis protein, MdoG GT347_19270 PF00563 EAL domain GT347_19270 PF01590 GAF domain GT347_19270 PF00990 Diguanylate cyclase, GGDEF domain GT347_19270 PF00360 Phytochrome region GT347_19275 PF01425 Amidase GT347_19280 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GT347_19285 PF00528 Binding-protein-dependent transport system inner membrane component GT347_19295 PF13091 PLD-like domain GT347_19300 PF02913 FAD linked oxidases, C-terminal domain GT347_19300 PF01565 FAD binding domain GT347_19310 PF03631 Virulence factor BrkB GT347_19320 PF00571 CBS domain GT347_19320 PF00478 IMP dehydrogenase / GMP reductase domain GT347_19335 PF03334 Na+/H+ antiporter subunit GT347_19340 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) GT347_19345 PF01899 Na+/H+ ion antiporter subunit GT347_19350 PF00361 Proton-conducting membrane transporter GT347_19355 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L GT347_19360 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus GT347_19360 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter GT347_19360 PF13244 Domain of unknown function (DUF4040) GT347_19360 PF00361 Proton-conducting membrane transporter GT347_19375 PF18073 Rubredoxin metal binding domain GT347_19385 PF00216 Bacterial DNA-binding protein GT347_19390 PF00575 S1 RNA binding domain GT347_19395 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GT347_19400 PF02153 Prephenate dehydrogenase GT347_19405 PF00800 Prephenate dehydratase GT347_19405 PF01817 Chorismate mutase type II GT347_19405 PF01842 ACT domain GT347_19410 PF00266 Aminotransferase class-V GT347_19415 PF00521 DNA gyrase/topoisomerase IV, subunit A GT347_19415 PF03989 DNA gyrase C-terminal domain, beta-propeller GT347_19420 PF00691 OmpA family GT347_19430 PF13419 Haloacid dehalogenase-like hydrolase GT347_19440 PF00849 RNA pseudouridylate synthase GT347_19440 PF01479 S4 domain GT347_19465 PF00120 Glutamine synthetase, catalytic domain GT347_19465 PF03951 Glutamine synthetase, beta-Grasp domain GT347_19475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_19475 PF00512 His Kinase A (phospho-acceptor) domain GT347_19475 PF00989 PAS fold GT347_19480 PF02954 Bacterial regulatory protein, Fis family GT347_19480 PF00072 Response regulator receiver domain GT347_19480 PF00158 Sigma-54 interaction domain GT347_19485 PF03372 Endonuclease/Exonuclease/phosphatase family GT347_19495 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain GT347_19495 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GT347_19495 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GT347_19505 PF00535 Glycosyl transferase family 2 GT347_19510 PF00132 Bacterial transferase hexapeptide (six repeats) GT347_19515 PF13439 Glycosyltransferase Family 4 GT347_19515 PF00534 Glycosyl transferases group 1 GT347_19525 PF00732 GMC oxidoreductase GT347_19525 PF05199 GMC oxidoreductase GT347_19525 PF00732 GMC oxidoreductase GT347_19525 PF05199 GMC oxidoreductase GT347_19545 PF09721 Transmembrane exosortase (Exosortase_EpsH) GT347_19550 PF13614 AAA domain GT347_19585 PF00196 Bacterial regulatory proteins, luxR family GT347_19590 PF02397 Bacterial sugar transferase GT347_19600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_19600 PF00512 His Kinase A (phospho-acceptor) domain GT347_19600 PF18415 Histidine kinase receptor ArcB trans-membrane domain GT347_19600 PF00072 Response regulator receiver domain GT347_19600 PF00989 PAS fold GT347_19600 PF01627 Hpt domain GT347_19605 PF00072 Response regulator receiver domain GT347_19605 PF00196 Bacterial regulatory proteins, luxR family GT347_19615 PF01427 D-ala-D-ala dipeptidase GT347_19625 PF12833 Helix-turn-helix domain GT347_19640 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GT347_19645 PF00813 FliP family GT347_19650 PF01313 Bacterial export proteins, family 3 GT347_19690 PF01514 Secretory protein of YscJ/FliF family GT347_19705 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GT347_19705 PF18269 T3SS EscN ATPase C-terminal domain GT347_19705 PF02874 ATP synthase alpha/beta family, beta-barrel domain GT347_19725 PF00771 FHIPEP family GT347_19730 PF01312 FlhB HrpN YscU SpaS Family GT347_19740 PF00263 Bacterial type II and III secretion system protein GT347_19740 PF03958 Bacterial type II/III secretion system short domain GT347_19745 PF00186 Dihydrofolate reductase GT347_19750 PF00303 Thymidylate synthase GT347_19755 PF12419 SNF2 Helicase protein GT347_19755 PF00271 Helicase conserved C-terminal domain GT347_19755 PF00176 SNF2 family N-terminal domain GT347_19760 PF01584 CheW-like domain GT347_19765 PF04299 Putative FMN-binding domain GT347_19770 PF00356 Bacterial regulatory proteins, lacI family GT347_19775 PF00593 TonB dependent receptor GT347_19775 PF07715 TonB-dependent Receptor Plug Domain GT347_19780 PF02469 Fasciclin domain GT347_19785 PF12805 FUSC-like inner membrane protein yccS GT347_19790 PF03477 ATP cone domain GT347_19795 PF00464 Serine hydroxymethyltransferase GT347_19800 PF01464 Transglycosylase SLT domain GT347_19800 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain GT347_19815 PF01132 Elongation factor P (EF-P) OB domain GT347_19815 PF09285 Elongation factor P, C-terminal GT347_19815 PF08207 Elongation factor P (EF-P) KOW-like domain GT347_19825 PF00534 Glycosyl transferases group 1 GT347_19825 PF13477 Glycosyl transferase 4-like GT347_19835 PF00202 Aminotransferase class-III GT347_19835 PF00501 AMP-binding enzyme GT347_19835 PF13193 AMP-binding enzyme C-terminal domain GT347_19835 PF16197 Ketoacyl-synthetase C-terminal extension GT347_19835 PF00109 Beta-ketoacyl synthase, N-terminal domain GT347_19835 PF02801 Beta-ketoacyl synthase, C-terminal domain GT347_19835 PF00550 Phosphopantetheine attachment site GT347_19835 PF00668 Condensation domain GT347_19840 PF02666 Phosphatidylserine decarboxylase GT347_19855 PF00106 short chain dehydrogenase GT347_19860 PF13454 FAD-NAD(P)-binding GT347_19875 PF00005 ABC transporter GT347_19875 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GT347_19880 PF12911 N-terminal TM domain of oligopeptide transport permease C GT347_19880 PF00528 Binding-protein-dependent transport system inner membrane component GT347_19885 PF00528 Binding-protein-dependent transport system inner membrane component GT347_19890 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GT347_19900 PF01541 GIY-YIG catalytic domain GT347_19900 PF08459 UvrC Helix-hairpin-helix N-terminal GT347_19900 PF02151 UvrB/uvrC motif GT347_19910 PF00216 Bacterial DNA-binding protein GT347_19920 PF05698 Bacterial trigger factor protein (TF) C-terminus GT347_19930 PF00072 Response regulator receiver domain GT347_19950 PF00990 Diguanylate cyclase, GGDEF domain GT347_19950 PF00563 EAL domain GT347_19950 PF03707 Bacterial signalling protein N terminal repeat GT347_19955 PF01975 Survival protein SurE GT347_19985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_19985 PF03466 LysR substrate binding domain GT347_19990 PF02770 Acyl-CoA dehydrogenase, middle domain GT347_19990 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GT347_19990 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GT347_19995 PF02515 CoA-transferase family III GT347_20005 PF03631 Virulence factor BrkB GT347_20025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GT347_20025 PF02203 Tar ligand binding domain homologue GT347_20025 PF00672 HAMP domain GT347_20040 PF13458 Periplasmic binding protein GT347_20085 PF00145 C-5 cytosine-specific DNA methylase GT347_20210 PF07102 Protein of unknown function (DUF1364) GT347_20430 PF00291 Pyridoxal-phosphate dependent enzyme GT347_20435 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain GT347_20435 PF00293 NUDIX domain GT347_20435 PF09297 NADH pyrophosphatase zinc ribbon domain GT347_20440 PF01206 Sulfurtransferase TusA GT347_20445 PF00483 Nucleotidyl transferase GT347_20475 PF00311 Phosphoenolpyruvate carboxylase GT347_20485 PF08448 PAS fold GT347_20485 PF13188 PAS domain GT347_20485 PF00072 Response regulator receiver domain GT347_20485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_20485 PF00512 His Kinase A (phospho-acceptor) domain GT347_20490 PF00083 Sugar (and other) transporter GT347_20495 PF01050 Mannose-6-phosphate isomerase GT347_20495 PF00483 Nucleotidyl transferase GT347_20500 PF04546 Sigma-70, non-essential region GT347_20500 PF03979 Sigma-70 factor, region 1.1 GT347_20500 PF00140 Sigma-70 factor, region 1.2 GT347_20500 PF04545 Sigma-70, region 4 GT347_20500 PF04539 Sigma-70 region 3 GT347_20500 PF04542 Sigma-70 region 2 GT347_20505 PF10410 DnaB-helicase binding domain of primase GT347_20505 PF08275 DNA primase catalytic core, N-terminal domain GT347_20505 PF08278 DNA primase DnaG DnaB-binding GT347_20505 PF13662 Toprim domain GT347_20505 PF01807 CHC2 zinc finger GT347_20510 PF01255 Putative undecaprenyl diphosphate synthase GT347_20525 PF02397 Bacterial sugar transferase GT347_20530 PF00111 2Fe-2S iron-sulfur cluster binding domain GT347_20530 PF00970 Oxidoreductase FAD-binding domain GT347_20530 PF00175 Oxidoreductase NAD-binding domain GT347_20535 PF00483 Nucleotidyl transferase GT347_20540 PF16363 GDP-mannose 4,6 dehydratase GT347_20545 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family GT347_20555 PF00456 Transketolase, thiamine diphosphate binding domain GT347_20560 PF02779 Transketolase, pyrimidine binding domain GT347_20560 PF02780 Transketolase, C-terminal domain GT347_20575 PF01501 Glycosyl transferase family 8 GT347_20575 PF00535 Glycosyl transferase family 2 GT347_20595 PF16363 GDP-mannose 4,6 dehydratase GT347_20600 PF01370 NAD dependent epimerase/dehydratase family GT347_20605 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family GT347_20625 PF06082 Exopolysaccharide biosynthesis protein YbjH GT347_20640 PF16363 GDP-mannose 4,6 dehydratase GT347_20655 PF09423 PhoD-like phosphatase GT347_20655 PF16655 PhoD-like phosphatase, N-terminal domain GT347_20660 PF16363 GDP-mannose 4,6 dehydratase GT347_20665 PF04321 RmlD substrate binding domain GT347_20670 PF00483 Nucleotidyl transferase GT347_20675 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase GT347_20680 PF13545 Crp-like helix-turn-helix domain GT347_20680 PF00027 Cyclic nucleotide-binding domain GT347_20685 PF06969 HemN C-terminal domain GT347_20685 PF04055 Radical SAM superfamily GT347_20690 PF00005 ABC transporter GT347_20690 PF00664 ABC transporter transmembrane region GT347_20695 PF00664 ABC transporter transmembrane region GT347_20695 PF00005 ABC transporter GT347_20700 PF01654 Cytochrome bd terminal oxidase subunit I GT347_20705 PF02322 Cytochrome bd terminal oxidase subunit II GT347_20715 PF03922 OmpW family GT347_20730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_20730 PF03466 LysR substrate binding domain GT347_20735 PF00497 Bacterial extracellular solute-binding proteins, family 3 GT347_20740 PF13417 Glutathione S-transferase, N-terminal domain GT347_20745 PF00175 Oxidoreductase NAD-binding domain GT347_20745 PF00258 Flavodoxin GT347_20745 PF00667 FAD binding domain GT347_20750 PF00072 Response regulator receiver domain GT347_20755 PF02515 CoA-transferase family III GT347_20760 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GT347_20760 PF02770 Acyl-CoA dehydrogenase, middle domain GT347_20760 PF12806 Acetyl-CoA dehydrogenase C-terminal like GT347_20760 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GT347_20765 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GT347_20780 PF00375 Sodium:dicarboxylate symporter family GT347_20810 PF04909 Amidohydrolase GT347_20815 PF03401 Tripartite tricarboxylate transporter family receptor GT347_20820 PF03466 LysR substrate binding domain GT347_20820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_20830 PF03576 Peptidase family S58 GT347_20835 PF12911 N-terminal TM domain of oligopeptide transport permease C GT347_20835 PF00528 Binding-protein-dependent transport system inner membrane component GT347_20840 PF00528 Binding-protein-dependent transport system inner membrane component GT347_20845 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GT347_20850 PF00005 ABC transporter GT347_20850 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GT347_20855 PF01112 Asparaginase GT347_20880 PF08448 PAS fold GT347_20880 PF13188 PAS domain GT347_20880 PF00072 Response regulator receiver domain GT347_20880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_20880 PF00512 His Kinase A (phospho-acceptor) domain GT347_20885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_20885 PF03466 LysR substrate binding domain GT347_20890 PF02515 CoA-transferase family III GT347_20900 PF03401 Tripartite tricarboxylate transporter family receptor GT347_20905 PF12146 Serine aminopeptidase, S33 GT347_20910 PF08448 PAS fold GT347_20910 PF00990 Diguanylate cyclase, GGDEF domain GT347_20925 PF04679 ATP dependent DNA ligase C terminal region GT347_20925 PF13298 DNA polymerase Ligase (LigD) GT347_20925 PF01068 ATP dependent DNA ligase domain GT347_20935 PF02735 Ku70/Ku80 beta-barrel domain GT347_20940 PF03466 LysR substrate binding domain GT347_20940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_20945 PF00248 Aldo/keto reductase family GT347_20960 PF01613 Flavin reductase like domain GT347_20970 PF03466 LysR substrate binding domain GT347_20970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_20975 PF01062 Bestrophin, RFP-TM, chloride channel GT347_20980 PF05378 Hydantoinase/oxoprolinase N-terminal region GT347_20980 PF01968 Hydantoinase/oxoprolinase GT347_20985 PF02538 Hydantoinase B/oxoprolinase GT347_20990 PF03401 Tripartite tricarboxylate transporter family receptor GT347_20995 PF03401 Tripartite tricarboxylate transporter family receptor GT347_21005 PF05985 Ethanolamine ammonia-lyase light chain (EutC) GT347_21010 PF06751 Ethanolamine ammonia lyase large subunit (EutB) GT347_21025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_21025 PF03466 LysR substrate binding domain GT347_21030 PF03401 Tripartite tricarboxylate transporter family receptor GT347_21045 PF06719 AraC-type transcriptional regulator N-terminus GT347_21045 PF12833 Helix-turn-helix domain GT347_21055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_21055 PF13426 PAS domain GT347_21055 PF00072 Response regulator receiver domain GT347_21060 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase GT347_21060 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain GT347_21070 PF01613 Flavin reductase like domain GT347_21080 PF03466 LysR substrate binding domain GT347_21080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_21085 PF00005 ABC transporter GT347_21100 PF02608 ABC transporter substrate-binding protein PnrA-like GT347_21115 PF08240 Alcohol dehydrogenase GroES-like domain GT347_21115 PF00107 Zinc-binding dehydrogenase GT347_21120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_21120 PF03466 LysR substrate binding domain GT347_21125 PF13593 SBF-like CPA transporter family (DUF4137) GT347_21130 PF00196 Bacterial regulatory proteins, luxR family GT347_21130 PF00072 Response regulator receiver domain GT347_21135 PF02690 Na+/Pi-cotransporter GT347_21140 PF01252 Signal peptidase (SPase) II GT347_21145 PF08264 Anticodon-binding domain of tRNA GT347_21145 PF00133 tRNA synthetases class I (I, L, M and V) GT347_21145 PF06827 Zinc finger found in FPG and IleRS GT347_21150 PF01687 Riboflavin kinase GT347_21150 PF06574 FAD synthetase GT347_21160 PF04337 Protein of unknown function, DUF480 GT347_21165 PF00551 Formyl transferase GT347_21175 PF00072 Response regulator receiver domain GT347_21175 PF00486 Transcriptional regulatory protein, C terminal GT347_21180 PF00672 HAMP domain GT347_21180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_21180 PF00512 His Kinase A (phospho-acceptor) domain GT347_21185 PF01029 NusB family GT347_21185 PF01189 16S rRNA methyltransferase RsmB/F GT347_21195 PF01176 Translation initiation factor 1A / IF-1 GT347_21200 PF00471 Ribosomal protein L33 GT347_21205 PF00830 Ribosomal L28 family GT347_21210 PF07992 Pyridine nucleotide-disulphide oxidoreductase GT347_21215 PF00027 Cyclic nucleotide-binding domain GT347_21215 PF13545 Crp-like helix-turn-helix domain GT347_21220 PF09397 Ftsk gamma domain GT347_21220 PF17854 FtsK alpha domain GT347_21220 PF01580 FtsK/SpoIIIE family GT347_21220 PF13491 4TM region of DNA translocase FtsK/SpoIIIE GT347_21225 PF03548 Outer membrane lipoprotein carrier protein LolA GT347_21230 PF00654 Voltage gated chloride channel GT347_21240 PF16193 AAA C-terminal domain GT347_21240 PF12002 MgsA AAA+ ATPase C terminal GT347_21240 PF00004 ATPase family associated with various cellular activities (AAA) GT347_21245 PF02653 Branched-chain amino acid transport system / permease component GT347_21250 PF02653 Branched-chain amino acid transport system / permease component GT347_21250 PF11862 Domain of unknown function (DUF3382) GT347_21255 PF00005 ABC transporter GT347_21255 PF12399 Branched-chain amino acid ATP-binding cassette transporter GT347_21260 PF00005 ABC transporter GT347_21270 PF01865 Protein of unknown function DUF47 GT347_21275 PF01384 Phosphate transporter family GT347_21290 PF00886 Ribosomal protein S16 GT347_21295 PF05239 PRC-barrel domain GT347_21295 PF01782 RimM N-terminal domain GT347_21300 PF01746 tRNA (Guanine-1)-methyltransferase GT347_21305 PF01245 Ribosomal protein L19 GT347_21310 PF00293 NUDIX domain GT347_21315 PF03186 CobD/Cbib protein GT347_21315 PF17113 Regulatory signalling modulator protein AmpE GT347_21325 PF03193 RsgA GTPase GT347_21330 PF01329 Pterin 4 alpha carbinolamine dehydratase GT347_21335 PF01435 Peptidase family M48 GT347_21340 PF00929 Exonuclease GT347_21345 PF00271 Helicase conserved C-terminal domain GT347_21345 PF00270 DEAD/DEAH box helicase GT347_21350 PF00990 Diguanylate cyclase, GGDEF domain GT347_21350 PF03707 Bacterial signalling protein N terminal repeat GT347_21350 PF13188 PAS domain GT347_21350 PF00563 EAL domain GT347_21355 PF07690 Major Facilitator Superfamily GT347_21380 PF00672 HAMP domain GT347_21380 PF02203 Tar ligand binding domain homologue GT347_21380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GT347_21400 PF04545 Sigma-70, region 4 GT347_21400 PF04542 Sigma-70 region 2 GT347_21405 PF16220 Domain of unknown function (DUF4880) GT347_21405 PF04773 FecR protein GT347_21410 PF00593 TonB dependent receptor GT347_21410 PF07715 TonB-dependent Receptor Plug Domain GT347_21415 PF00027 Cyclic nucleotide-binding domain GT347_21415 PF00520 Ion transport protein GT347_21425 PF00990 Diguanylate cyclase, GGDEF domain GT347_21425 PF00563 EAL domain GT347_21425 PF03707 Bacterial signalling protein N terminal repeat GT347_21430 PF01207 Dihydrouridine synthase (Dus) GT347_21445 PF03976 Polyphosphate kinase 2 (PPK2) GT347_21460 PF01758 Sodium Bile acid symporter family GT347_21465 PF01037 Lrp/AsnC ligand binding domain GT347_21470 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GT347_21470 PF00205 Thiamine pyrophosphate enzyme, central domain GT347_21470 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GT347_21480 PF13806 Rieske-like [2Fe-2S] domain GT347_21485 PF18267 Rubredoxin NAD+ reductase C-terminal domain GT347_21485 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GT347_21485 PF01077 Nitrite and sulphite reductase 4Fe-4S domain GT347_21485 PF04324 BFD-like [2Fe-2S] binding domain GT347_21485 PF07992 Pyridine nucleotide-disulphide oxidoreductase GT347_21490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_21490 PF03466 LysR substrate binding domain GT347_21500 PF03401 Tripartite tricarboxylate transporter family receptor GT347_21505 PF00180 Isocitrate/isopropylmalate dehydrogenase GT347_21510 PF00512 His Kinase A (phospho-acceptor) domain GT347_21510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_21510 PF08448 PAS fold GT347_21510 PF00072 Response regulator receiver domain GT347_21510 PF13188 PAS domain GT347_21520 PF01569 PAP2 superfamily GT347_21525 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase GT347_21535 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family GT347_21540 PF00535 Glycosyl transferase family 2 GT347_21545 PF02911 Formyl transferase, C-terminal domain GT347_21545 PF00551 Formyl transferase GT347_21545 PF01370 NAD dependent epimerase/dehydratase family GT347_21550 PF00551 Formyl transferase GT347_21550 PF02911 Formyl transferase, C-terminal domain GT347_21550 PF01370 NAD dependent epimerase/dehydratase family GT347_21555 PF01522 Polysaccharide deacetylase GT347_21580 PF07715 TonB-dependent Receptor Plug Domain GT347_21580 PF00593 TonB dependent receptor GT347_21585 PF00593 TonB dependent receptor GT347_21585 PF07715 TonB-dependent Receptor Plug Domain GT347_21590 PF16220 Domain of unknown function (DUF4880) GT347_21590 PF04773 FecR protein GT347_21600 PF03649 Uncharacterised protein family (UPF0014) GT347_21605 PF00005 ABC transporter GT347_21610 PF00873 AcrB/AcrD/AcrF family GT347_21630 PF13426 PAS domain GT347_21630 PF00072 Response regulator receiver domain GT347_21630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_21640 PF00072 Response regulator receiver domain GT347_21640 PF00486 Transcriptional regulatory protein, C terminal GT347_21645 PF08521 Two-component sensor kinase N-terminal GT347_21645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_21645 PF00512 His Kinase A (phospho-acceptor) domain GT347_21650 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB GT347_21650 PF00672 HAMP domain GT347_21650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_21650 PF00512 His Kinase A (phospho-acceptor) domain GT347_21650 PF08448 PAS fold GT347_21655 PF00072 Response regulator receiver domain GT347_21655 PF00486 Transcriptional regulatory protein, C terminal GT347_21660 PF01641 SelR domain GT347_21665 PF17991 Thioredoxin like C-terminal domain GT347_21665 PF02683 Cytochrome C biogenesis protein transmembrane region GT347_21665 PF00578 AhpC/TSA family GT347_21670 PF01625 Peptide methionine sulfoxide reductase GT347_21690 PF03459 TOBE domain GT347_21690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_21695 PF03737 Aldolase/RraA GT347_21700 PF03401 Tripartite tricarboxylate transporter family receptor GT347_21710 PF07729 FCD domain GT347_21710 PF00392 Bacterial regulatory proteins, gntR family GT347_21725 PF04264 YceI-like domain GT347_21740 PF04185 Phosphoesterase family GT347_21740 PF05506 Domain of unknown function (DUF756) GT347_21760 PF00593 TonB dependent receptor GT347_21760 PF07715 TonB-dependent Receptor Plug Domain GT347_21770 PF08281 Sigma-70, region 4 GT347_21770 PF04542 Sigma-70 region 2 GT347_21775 PF08240 Alcohol dehydrogenase GroES-like domain GT347_21790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_21790 PF03466 LysR substrate binding domain GT347_21795 PF03466 LysR substrate binding domain GT347_21795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_21800 PF07690 Major Facilitator Superfamily GT347_21805 PF08448 PAS fold GT347_21805 PF00072 Response regulator receiver domain GT347_21805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_21805 PF00512 His Kinase A (phospho-acceptor) domain GT347_21805 PF13188 PAS domain GT347_21810 PF18073 Rubredoxin metal binding domain GT347_21850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_21850 PF00072 Response regulator receiver domain GT347_21850 PF13188 PAS domain GT347_21850 PF08448 PAS fold GT347_21850 PF00512 His Kinase A (phospho-acceptor) domain GT347_21870 PF01810 LysE type translocator GT347_21875 PF00596 Class II Aldolase and Adducin N-terminal domain GT347_21905 PF00589 Phage integrase family GT347_21905 PF02899 Phage integrase, N-terminal SAM-like domain GT347_21915 PF00701 Dihydrodipicolinate synthetase family GT347_21920 PF13378 Enolase C-terminal domain-like GT347_21920 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GT347_21930 PF03401 Tripartite tricarboxylate transporter family receptor GT347_21935 PF03466 LysR substrate binding domain GT347_21935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_21955 PF00440 Bacterial regulatory proteins, tetR family GT347_21955 PF16925 Tetracyclin repressor-like, C-terminal domain GT347_21975 PF00732 GMC oxidoreductase GT347_21975 PF05199 GMC oxidoreductase GT347_21980 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GT347_21980 PF00005 ABC transporter GT347_21985 PF00528 Binding-protein-dependent transport system inner membrane component GT347_21990 PF00528 Binding-protein-dependent transport system inner membrane component GT347_21995 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GT347_22000 PF07687 Peptidase dimerisation domain GT347_22000 PF01546 Peptidase family M20/M25/M40 GT347_22010 PF13378 Enolase C-terminal domain-like GT347_22020 PF03401 Tripartite tricarboxylate transporter family receptor GT347_22025 PF00701 Dihydrodipicolinate synthetase family GT347_22030 PF03466 LysR substrate binding domain GT347_22030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_22060 PF03401 Tripartite tricarboxylate transporter family receptor GT347_22080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_22085 PF00497 Bacterial extracellular solute-binding proteins, family 3 GT347_22090 PF00155 Aminotransferase class I and II GT347_22095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_22105 PF00486 Transcriptional regulatory protein, C terminal GT347_22105 PF00072 Response regulator receiver domain GT347_22110 PF00512 His Kinase A (phospho-acceptor) domain GT347_22110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_22120 PF00884 Sulfatase GT347_22135 PF00873 AcrB/AcrD/AcrF family GT347_22150 PF04303 PrpF protein GT347_22160 PF03401 Tripartite tricarboxylate transporter family receptor GT347_22165 PF00285 Citrate synthase, C-terminal domain GT347_22170 PF09856 Predicted transcriptional regulator (DUF2083) GT347_22170 PF01381 Helix-turn-helix GT347_22170 PF06114 IrrE N-terminal-like domain GT347_22180 PF02734 DAK2 domain GT347_22180 PF02733 Dak1 domain GT347_22185 PF02733 Dak1 domain GT347_22190 PF00701 Dihydrodipicolinate synthetase family GT347_22220 PF03401 Tripartite tricarboxylate transporter family receptor GT347_22225 PF05853 beta-keto acid cleavage enzyme GT347_22230 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GT347_22230 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GT347_22230 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain GT347_22235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_22235 PF03466 LysR substrate binding domain GT347_22240 PF07715 TonB-dependent Receptor Plug Domain GT347_22240 PF00593 TonB dependent receptor GT347_22255 PF00351 Biopterin-dependent aromatic amino acid hydroxylase GT347_22260 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GT347_22265 PF01037 Lrp/AsnC ligand binding domain GT347_22275 PF13426 PAS domain GT347_22275 PF08448 PAS fold GT347_22275 PF08447 PAS fold GT347_22275 PF05231 MASE1 GT347_22275 PF00563 EAL domain GT347_22275 PF00990 Diguanylate cyclase, GGDEF domain GT347_22280 PF05247 Flagellar transcriptional activator (FlhD) GT347_22285 PF00766 Electron transfer flavoprotein FAD-binding domain GT347_22285 PF01012 Electron transfer flavoprotein domain GT347_22290 PF01012 Electron transfer flavoprotein domain GT347_22295 PF03060 Nitronate monooxygenase GT347_22300 PF03401 Tripartite tricarboxylate transporter family receptor GT347_22305 PF02515 CoA-transferase family III GT347_22310 PF00378 Enoyl-CoA hydratase/isomerase GT347_22315 PF02770 Acyl-CoA dehydrogenase, middle domain GT347_22315 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GT347_22315 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GT347_22320 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GT347_22320 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GT347_22320 PF02770 Acyl-CoA dehydrogenase, middle domain GT347_22325 PF02803 Thiolase, C-terminal domain GT347_22325 PF00108 Thiolase, N-terminal domain GT347_22330 PF00378 Enoyl-CoA hydratase/isomerase GT347_22330 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GT347_22330 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GT347_22335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_22335 PF03466 LysR substrate binding domain GT347_22345 PF03401 Tripartite tricarboxylate transporter family receptor GT347_22355 PF03466 LysR substrate binding domain GT347_22355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_22360 PF03401 Tripartite tricarboxylate transporter family receptor GT347_22365 PF00155 Aminotransferase class I and II GT347_22370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_22370 PF03466 LysR substrate binding domain GT347_22405 PF00486 Transcriptional regulatory protein, C terminal GT347_22405 PF00072 Response regulator receiver domain GT347_22410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_22410 PF08521 Two-component sensor kinase N-terminal GT347_22410 PF00512 His Kinase A (phospho-acceptor) domain GT347_22415 PF01565 FAD binding domain GT347_22415 PF02913 FAD linked oxidases, C-terminal domain GT347_22420 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GT347_22425 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component GT347_22435 PF00920 Dehydratase family GT347_22440 PF03480 Bacterial extracellular solute-binding protein, family 7 GT347_22445 PF03466 LysR substrate binding domain GT347_22445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_22450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_22450 PF03466 LysR substrate binding domain GT347_22475 PF02321 Outer membrane efflux protein GT347_22480 PF13533 Biotin-lipoyl like GT347_22485 PF00873 AcrB/AcrD/AcrF family GT347_22490 PF00072 Response regulator receiver domain GT347_22490 PF00486 Transcriptional regulatory protein, C terminal GT347_22495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_22495 PF00512 His Kinase A (phospho-acceptor) domain GT347_22495 PF00672 HAMP domain GT347_22505 PF01177 Asp/Glu/Hydantoin racemase GT347_22510 PF00449 Urease alpha-subunit, N-terminal domain GT347_22510 PF01979 Amidohydrolase family GT347_22525 PF00005 ABC transporter GT347_22530 PF00528 Binding-protein-dependent transport system inner membrane component GT347_22560 PF02515 CoA-transferase family III GT347_22570 PF03401 Tripartite tricarboxylate transporter family receptor GT347_22585 PF03401 Tripartite tricarboxylate transporter family receptor GT347_22605 PF03150 Di-haem cytochrome c peroxidase GT347_22605 PF00034 Cytochrome c GT347_22620 PF03401 Tripartite tricarboxylate transporter family receptor GT347_22625 PF00378 Enoyl-CoA hydratase/isomerase GT347_22630 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GT347_22630 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GT347_22630 PF02770 Acyl-CoA dehydrogenase, middle domain GT347_22640 PF02515 CoA-transferase family III GT347_22650 PF00478 IMP dehydrogenase / GMP reductase domain GT347_22660 PF13361 UvrD-like helicase C-terminal domain GT347_22660 PF00580 UvrD/REP helicase N-terminal domain GT347_22670 PF01636 Phosphotransferase enzyme family GT347_22680 PF01612 3'-5' exonuclease GT347_22680 PF01367 5'-3' exonuclease, C-terminal SAM fold GT347_22680 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain GT347_22680 PF00476 DNA polymerase family A GT347_22705 PF04397 LytTr DNA-binding domain GT347_22705 PF00072 Response regulator receiver domain GT347_22710 PF14698 Argininosuccinate lyase C-terminal GT347_22710 PF00206 Lyase GT347_22715 PF00486 Transcriptional regulatory protein, C terminal GT347_22715 PF00072 Response regulator receiver domain GT347_22720 PF00512 His Kinase A (phospho-acceptor) domain GT347_22720 PF08521 Two-component sensor kinase N-terminal GT347_22720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_22740 PF00210 Ferritin-like domain GT347_22745 PF10417 C-terminal domain of 1-Cys peroxiredoxin GT347_22745 PF00578 AhpC/TSA family GT347_22750 PF07992 Pyridine nucleotide-disulphide oxidoreductase GT347_22750 PF13192 Thioredoxin domain GT347_22760 PF03618 Kinase/pyrophosphorylase GT347_22765 PF00391 PEP-utilising enzyme, mobile domain GT347_22765 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain GT347_22765 PF02896 PEP-utilising enzyme, TIM barrel domain GT347_22780 PF00474 Sodium:solute symporter family GT347_22785 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GT347_22800 PF01195 Peptidyl-tRNA hydrolase GT347_22820 PF00171 Aldehyde dehydrogenase family GT347_22825 PF03401 Tripartite tricarboxylate transporter family receptor GT347_22830 PF08666 SAF domain GT347_22830 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus GT347_22835 PF07729 FCD domain GT347_22835 PF00392 Bacterial regulatory proteins, gntR family GT347_22840 PF00701 Dihydrodipicolinate synthetase family GT347_22845 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GT347_22845 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GT347_22850 PF13378 Enolase C-terminal domain-like GT347_22850 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GT347_22855 PF07519 Tannase and feruloyl esterase GT347_22860 PF03466 LysR substrate binding domain GT347_22860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_22875 PF10609 NUBPL iron-transfer P-loop NTPase GT347_22900 PF03401 Tripartite tricarboxylate transporter family receptor GT347_22905 PF00356 Bacterial regulatory proteins, lacI family GT347_22930 PF07690 Major Facilitator Superfamily GT347_22935 PF00384 Molybdopterin oxidoreductase GT347_22950 PF02634 FdhD/NarQ family GT347_22955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_22955 PF03466 LysR substrate binding domain GT347_22960 PF07859 alpha/beta hydrolase fold GT347_22965 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GT347_22970 PF00873 AcrB/AcrD/AcrF family GT347_22975 PF02321 Outer membrane efflux protein GT347_23000 PF00462 Glutaredoxin GT347_23005 PF17827 PrmC N-terminal domain GT347_23005 PF05175 Methyltransferase small domain GT347_23010 PF03462 PCRF domain GT347_23010 PF00472 RF-1 domain GT347_23015 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain GT347_23015 PF01488 Shikimate / quinate 5-dehydrogenase GT347_23015 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain GT347_23030 PF03009 Glycerophosphoryl diester phosphodiesterase family GT347_23035 PF17912 MalK OB fold domain GT347_23035 PF00005 ABC transporter GT347_23040 PF00528 Binding-protein-dependent transport system inner membrane component GT347_23045 PF00528 Binding-protein-dependent transport system inner membrane component GT347_23050 PF13416 Bacterial extracellular solute-binding protein GT347_23055 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GT347_23055 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GT347_23060 PF07715 TonB-dependent Receptor Plug Domain GT347_23060 PF00593 TonB dependent receptor GT347_23065 PF05171 Haemin-degrading HemS.ChuX domain GT347_23070 PF02728 Copper amine oxidase, N3 domain GT347_23070 PF02727 Copper amine oxidase, N2 domain GT347_23070 PF07833 Copper amine oxidase N-terminal domain GT347_23070 PF01179 Copper amine oxidase, enzyme domain GT347_23085 PF03401 Tripartite tricarboxylate transporter family receptor GT347_23090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_23090 PF03466 LysR substrate binding domain GT347_23100 PF00202 Aminotransferase class-III GT347_23105 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GT347_23115 PF08402 TOBE domain GT347_23115 PF00005 ABC transporter GT347_23120 PF00528 Binding-protein-dependent transport system inner membrane component GT347_23125 PF00528 Binding-protein-dependent transport system inner membrane component GT347_23135 PF04324 BFD-like [2Fe-2S] binding domain GT347_23135 PF07992 Pyridine nucleotide-disulphide oxidoreductase GT347_23140 PF01266 FAD dependent oxidoreductase GT347_23155 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GT347_23160 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component GT347_23165 PF01220 Dehydroquinase class II GT347_23170 PF03480 Bacterial extracellular solute-binding protein, family 7 GT347_23180 PF12697 Alpha/beta hydrolase family GT347_23190 PF00775 Dioxygenase GT347_23190 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal GT347_23195 PF03466 LysR substrate binding domain GT347_23195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_23205 PF00206 Lyase GT347_23205 PF10397 Adenylosuccinate lyase C-terminus GT347_23215 PF03480 Bacterial extracellular solute-binding protein, family 7 GT347_23225 PF01070 FMN-dependent dehydrogenase GT347_23230 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GT347_23230 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GT347_23230 PF00205 Thiamine pyrophosphate enzyme, central domain GT347_23235 PF03466 LysR substrate binding domain GT347_23235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_23240 PF07690 Major Facilitator Superfamily GT347_23250 PF00528 Binding-protein-dependent transport system inner membrane component GT347_23255 PF00037 4Fe-4S binding domain GT347_23260 PF03401 Tripartite tricarboxylate transporter family receptor GT347_23265 PF07687 Peptidase dimerisation domain GT347_23265 PF01546 Peptidase family M20/M25/M40 GT347_23270 PF03466 LysR substrate binding domain GT347_23270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_23275 PF02569 Pantoate-beta-alanine ligase GT347_23295 PF02548 Ketopantoate hydroxymethyltransferase GT347_23310 PF02616 Segregation and condensation protein ScpA GT347_23330 PF09334 tRNA synthetases class I (M) GT347_23330 PF01588 Putative tRNA binding domain GT347_23335 PF00270 DEAD/DEAH box helicase GT347_23335 PF00271 Helicase conserved C-terminal domain GT347_23350 PF12848 ABC transporter GT347_23350 PF00005 ABC transporter GT347_23360 PF00756 Putative esterase GT347_23365 PF08240 Alcohol dehydrogenase GroES-like domain GT347_23365 PF00107 Zinc-binding dehydrogenase GT347_23370 PF01965 DJ-1/PfpI family GT347_23370 PF12833 Helix-turn-helix domain GT347_23375 PF00285 Citrate synthase, C-terminal domain GT347_23380 PF03937 Flavinator of succinate dehydrogenase GT347_23385 PF13085 2Fe-2S iron-sulfur cluster binding domain GT347_23395 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit GT347_23400 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit GT347_23405 PF07702 UTRA domain GT347_23405 PF00392 Bacterial regulatory proteins, gntR family GT347_23410 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain GT347_23410 PF00056 lactate/malate dehydrogenase, NAD binding domain GT347_23430 PF06434 Aconitate hydratase 2 N-terminus GT347_23430 PF00330 Aconitase family (aconitate hydratase) GT347_23430 PF11791 Aconitate B N-terminal domain GT347_23445 PF01593 Flavin containing amine oxidoreductase GT347_23465 PF05698 Bacterial trigger factor protein (TF) C-terminus GT347_23465 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GT347_23465 PF05697 Bacterial trigger factor protein (TF) GT347_23470 PF00574 Clp protease GT347_23475 PF07724 AAA domain (Cdc48 subfamily) GT347_23475 PF10431 C-terminal, D2-small domain, of ClpB protein GT347_23475 PF06689 ClpX C4-type zinc finger GT347_23480 PF00004 ATPase family associated with various cellular activities (AAA) GT347_23480 PF05362 Lon protease (S16) C-terminal proteolytic domain GT347_23480 PF02190 ATP-dependent protease La (LON) substrate-binding domain GT347_23500 PF13426 PAS domain GT347_23500 PF00990 Diguanylate cyclase, GGDEF domain GT347_23500 PF08447 PAS fold GT347_23500 PF05231 MASE1 GT347_23500 PF00563 EAL domain GT347_23500 PF08448 PAS fold GT347_23515 PF01177 Asp/Glu/Hydantoin racemase GT347_23525 PF03150 Di-haem cytochrome c peroxidase GT347_23540 PF00171 Aldehyde dehydrogenase family GT347_23545 PF01590 GAF domain GT347_23545 PF00158 Sigma-54 interaction domain GT347_23545 PF02954 Bacterial regulatory protein, Fis family GT347_23560 PF10415 Fumarase C C-terminus GT347_23560 PF00206 Lyase GT347_23565 PF03350 Uncharacterized protein family, UPF0114 GT347_23570 PF16177 Acetyl-coenzyme A synthetase N-terminus GT347_23570 PF13193 AMP-binding enzyme C-terminal domain GT347_23570 PF00501 AMP-binding enzyme GT347_23580 PF00034 Cytochrome c GT347_23590 PF00920 Dehydratase family GT347_23595 PF03466 LysR substrate binding domain GT347_23595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_23600 PF01790 Prolipoprotein diacylglyceryl transferase GT347_23605 PF01966 HD domain GT347_23610 PF00990 Diguanylate cyclase, GGDEF domain GT347_23610 PF00563 EAL domain GT347_23610 PF03707 Bacterial signalling protein N terminal repeat GT347_23615 PF00248 Aldo/keto reductase family GT347_23620 PF00072 Response regulator receiver domain GT347_23620 PF01627 Hpt domain GT347_23620 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) GT347_23620 PF00512 His Kinase A (phospho-acceptor) domain GT347_23620 PF00672 HAMP domain GT347_23620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_23625 PF01739 CheR methyltransferase, SAM binding domain GT347_23625 PF03705 CheR methyltransferase, all-alpha domain GT347_23630 PF01339 CheB methylesterase GT347_23635 PF00512 His Kinase A (phospho-acceptor) domain GT347_23635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_23645 PF01966 HD domain GT347_23645 PF11871 Domain of unknown function (DUF3391) GT347_23650 PF04461 Protein of unknown function (DUF520) GT347_23655 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain GT347_23655 PF01565 FAD binding domain GT347_23670 PF00152 tRNA synthetases class II (D, K and N) GT347_23670 PF01336 OB-fold nucleic acid binding domain GT347_23680 PF02325 YGGT family GT347_23685 PF01039 Carboxyl transferase domain GT347_23685 PF17848 Acetyl-coA carboxylase zinc finger domain GT347_23690 PF00290 Tryptophan synthase alpha chain GT347_23695 PF00291 Pyridoxal-phosphate dependent enzyme GT347_23700 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase GT347_23705 PF01416 tRNA pseudouridine synthase GT347_23715 PF01118 Semialdehyde dehydrogenase, NAD binding domain GT347_23715 PF02774 Semialdehyde dehydrogenase, dimerisation domain GT347_23725 PF00360 Phytochrome region GT347_23725 PF00990 Diguanylate cyclase, GGDEF domain GT347_23725 PF01590 GAF domain GT347_23725 PF00563 EAL domain GT347_23730 PF00180 Isocitrate/isopropylmalate dehydrogenase GT347_23735 PF00694 Aconitase C-terminal domain GT347_23740 PF00330 Aconitase family (aconitate hydratase) GT347_23745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_23745 PF03466 LysR substrate binding domain GT347_23750 PF00226 DnaJ domain GT347_23750 PF00684 DnaJ central domain GT347_23750 PF01556 DnaJ C terminal domain GT347_23755 PF00012 Hsp70 protein GT347_23760 PF01025 GrpE GT347_23765 PF01250 Ribosomal protein S6 GT347_23775 PF01084 Ribosomal protein S18 GT347_23780 PF03948 Ribosomal protein L9, C-terminal domain GT347_23780 PF01281 Ribosomal protein L9, N-terminal domain GT347_23785 PF03796 DnaB-like helicase C terminal domain GT347_23785 PF00772 DnaB-like helicase N terminal domain GT347_23800 PF00578 AhpC/TSA family GT347_23810 PF00155 Aminotransferase class I and II GT347_23815 PF00742 Homoserine dehydrogenase GT347_23815 PF01842 ACT domain GT347_23815 PF03447 Homoserine dehydrogenase, NAD binding domain GT347_23830 PF14821 Threonine synthase N terminus GT347_23830 PF00291 Pyridoxal-phosphate dependent enzyme GT347_23835 PF03205 Molybdopterin guanine dinucleotide synthesis protein B GT347_23840 PF03454 MoeA C-terminal region (domain IV) GT347_23840 PF00994 Probable molybdopterin binding domain GT347_23840 PF03453 MoeA N-terminal region (domain I and II) GT347_23850 PF02391 MoaE protein GT347_23860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_23860 PF00072 Response regulator receiver domain GT347_23860 PF13426 PAS domain GT347_23870 PF02779 Transketolase, pyrimidine binding domain GT347_23870 PF16078 2-oxoglutarate dehydrogenase N-terminus GT347_23870 PF00676 Dehydrogenase E1 component GT347_23870 PF16870 2-oxoglutarate dehydrogenase C-terminal GT347_23875 PF00364 Biotin-requiring enzyme GT347_23875 PF02817 e3 binding domain GT347_23875 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GT347_23890 PF07992 Pyridine nucleotide-disulphide oxidoreductase GT347_23890 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GT347_23895 PF03969 AFG1-like ATPase GT347_23910 PF13307 Helicase C-terminal domain GT347_23910 PF04851 Type III restriction enzyme, res subunit GT347_23915 PF13525 Outer membrane lipoprotein GT347_23920 PF00849 RNA pseudouridylate synthase GT347_23920 PF01479 S4 domain GT347_23935 PF00334 Nucleoside diphosphate kinase GT347_23940 PF04055 Radical SAM superfamily GT347_23955 PF04551 GcpE protein GT347_23960 PF03129 Anticodon binding domain GT347_23960 PF13393 Histidyl-tRNA synthetase GT347_23965 PF09976 Tetratricopeptide repeat-like domain GT347_23970 PF13360 PQQ-like domain GT347_23975 PF01926 50S ribosome-binding GTPase GT347_23975 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal GT347_23980 PF17209 Hfq protein GT347_23985 PF16360 GTP-binding GTPase Middle Region GT347_23985 PF01926 50S ribosome-binding GTPase GT347_23985 PF13167 GTP-binding GTPase N-terminal GT347_23990 PF01145 SPFH domain / Band 7 family GT347_23990 PF12221 Bacterial membrane protein N terminal GT347_23995 PF01145 SPFH domain / Band 7 family GT347_24005 PF13393 Histidyl-tRNA synthetase GT347_24010 PF00709 Adenylosuccinate synthetase GT347_24020 PF10609 NUBPL iron-transfer P-loop NTPase GT347_24025 PF00990 Diguanylate cyclase, GGDEF domain GT347_24025 PF00072 Response regulator receiver domain GT347_24030 PF01047 MarR family GT347_24035 PF02321 Outer membrane efflux protein GT347_24040 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GT347_24040 PF00529 HlyD membrane-fusion protein of T1SS GT347_24045 PF07690 Major Facilitator Superfamily GT347_24070 PF05567 Neisseria PilC beta-propeller domain GT347_24075 PF14245 Type IV pilin PilA GT347_24075 PF07963 Prokaryotic N-terminal methylation motif GT347_24080 PF13180 PDZ domain GT347_24105 PF00912 Transglycosylase GT347_24105 PF00905 Penicillin binding protein transpeptidase domain GT347_24110 PF03707 Bacterial signalling protein N terminal repeat GT347_24110 PF00563 EAL domain GT347_24110 PF00990 Diguanylate cyclase, GGDEF domain GT347_24115 PF01070 FMN-dependent dehydrogenase GT347_24120 PF00465 Iron-containing alcohol dehydrogenase GT347_24125 PF00107 Zinc-binding dehydrogenase GT347_24125 PF16884 N-terminal domain of oxidoreductase GT347_24130 PF03401 Tripartite tricarboxylate transporter family receptor GT347_24140 PF01594 AI-2E family transporter GT347_24145 PF05280 Flagellar transcriptional activator (FlhC) GT347_24150 PF05247 Flagellar transcriptional activator (FlhD) GT347_24160 PF02609 Exonuclease VII small subunit GT347_24165 PF00348 Polyprenyl synthetase GT347_24170 PF13292 1-deoxy-D-xylulose-5-phosphate synthase GT347_24170 PF02779 Transketolase, pyrimidine binding domain GT347_24170 PF02780 Transketolase, C-terminal domain GT347_24175 PF03480 Bacterial extracellular solute-binding protein, family 7 GT347_24185 PF03328 HpcH/HpaI aldolase/citrate lyase family GT347_24190 PF00384 Molybdopterin oxidoreductase GT347_24190 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GT347_24190 PF01568 Molydopterin dinucleotide binding domain GT347_24205 PF05995 Cysteine dioxygenase type I GT347_24210 PF02447 GntP family permease GT347_24235 PF01970 Tripartite tricarboxylate transporter TctA family GT347_24245 PF00512 His Kinase A (phospho-acceptor) domain GT347_24245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_24250 PF00072 Response regulator receiver domain GT347_24250 PF00486 Transcriptional regulatory protein, C terminal GT347_24255 PF00171 Aldehyde dehydrogenase family GT347_24260 PF08240 Alcohol dehydrogenase GroES-like domain GT347_24260 PF00107 Zinc-binding dehydrogenase GT347_24265 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GT347_24265 PF01411 tRNA synthetases class II (A) GT347_24265 PF02272 DHHA1 domain GT347_24270 PF17158 Membrane-associated sensor, integral membrane domain GT347_24270 PF00990 Diguanylate cyclase, GGDEF domain GT347_24275 PF02390 Putative methyltransferase GT347_24280 PF00749 tRNA synthetases class I (E and Q), catalytic domain GT347_24285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_24285 PF03466 LysR substrate binding domain GT347_24290 PF02678 Pirin GT347_24290 PF17954 Quercetinase C-terminal cupin domain GT347_24295 PF03358 NADPH-dependent FMN reductase GT347_24300 PF02678 Pirin GT347_24300 PF05726 Pirin C-terminal cupin domain GT347_24310 PF00999 Sodium/hydrogen exchanger family GT347_24315 PF07690 Major Facilitator Superfamily GT347_24320 PF07171 MlrC C-terminus GT347_24320 PF07364 Metallopeptidase family M81 GT347_24325 PF07687 Peptidase dimerisation domain GT347_24325 PF01546 Peptidase family M20/M25/M40 GT347_24330 PF00005 ABC transporter GT347_24335 PF12399 Branched-chain amino acid ATP-binding cassette transporter GT347_24335 PF00005 ABC transporter GT347_24345 PF02653 Branched-chain amino acid transport system / permease component GT347_24355 PF00392 Bacterial regulatory proteins, gntR family GT347_24355 PF07840 FadR C-terminal domain GT347_24360 PF00012 Hsp70 protein GT347_24370 PF07733 Bacterial DNA polymerase III alpha NTPase domain GT347_24370 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GT347_24370 PF02811 PHP domain GT347_24370 PF14579 Helix-hairpin-helix motif GT347_24370 PF01336 OB-fold nucleic acid binding domain GT347_24375 PF02617 ATP-dependent Clp protease adaptor protein ClpS GT347_24380 PF10431 C-terminal, D2-small domain, of ClpB protein GT347_24380 PF00004 ATPase family associated with various cellular activities (AAA) GT347_24380 PF17871 AAA lid domain GT347_24380 PF02861 Clp amino terminal domain, pathogenicity island component GT347_24380 PF07724 AAA domain (Cdc48 subfamily) GT347_24390 PF00929 Exonuclease GT347_24390 PF08411 Exonuclease C-terminal GT347_24395 PF01053 Cys/Met metabolism PLP-dependent enzyme GT347_24410 PF00463 Isocitrate lyase family GT347_24415 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GT347_24415 PF02824 TGS domain GT347_24415 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GT347_24415 PF03129 Anticodon binding domain GT347_24420 PF05198 Translation initiation factor IF-3, N-terminal domain GT347_24420 PF00707 Translation initiation factor IF-3, C-terminal domain GT347_24425 PF01632 Ribosomal protein L35 GT347_24430 PF00453 Ribosomal protein L20 GT347_24435 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain GT347_24435 PF01409 tRNA synthetases class II core domain (F) GT347_24440 PF03147 Ferredoxin-fold anticodon binding domain GT347_24440 PF01588 Putative tRNA binding domain GT347_24440 PF03484 tRNA synthetase B5 domain GT347_24440 PF03483 B3/4 domain GT347_24440 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain GT347_24445 PF00216 Bacterial DNA-binding protein GT347_24465 PF12796 Ankyrin repeats (3 copies) GT347_24465 PF00023 Ankyrin repeat GT347_24480 PF00202 Aminotransferase class-III GT347_24490 PF14850 DNA-binding domain of Proline dehydrogenase GT347_24490 PF18327 Proline utilization A proline dehydrogenase N-terminal domain GT347_24490 PF00171 Aldehyde dehydrogenase family GT347_24490 PF01619 Proline dehydrogenase GT347_24495 PF01037 Lrp/AsnC ligand binding domain GT347_24510 PF07690 Major Facilitator Superfamily GT347_24520 PF03466 LysR substrate binding domain GT347_24520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_24525 PF08267 Cobalamin-independent synthase, N-terminal domain GT347_24525 PF01717 Cobalamin-independent synthase, Catalytic domain GT347_24535 PF00723 Glycosyl hydrolases family 15 GT347_24545 PF00596 Class II Aldolase and Adducin N-terminal domain GT347_24555 PF03401 Tripartite tricarboxylate transporter family receptor GT347_24560 PF00392 Bacterial regulatory proteins, gntR family GT347_24560 PF07729 FCD domain GT347_24565 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GT347_24565 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GT347_24570 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GT347_24570 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GT347_24575 PF00392 Bacterial regulatory proteins, gntR family GT347_24575 PF07729 FCD domain GT347_24580 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GT347_24580 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GT347_24585 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GT347_24585 PF13378 Enolase C-terminal domain-like GT347_24590 PF03401 Tripartite tricarboxylate transporter family receptor GT347_24595 PF10605 3HB-oligomer hydrolase (3HBOH) GT347_24600 PF03401 Tripartite tricarboxylate transporter family receptor GT347_24605 PF04324 BFD-like [2Fe-2S] binding domain GT347_24605 PF07992 Pyridine nucleotide-disulphide oxidoreductase GT347_24615 PF01266 FAD dependent oxidoreductase GT347_24620 PF03466 LysR substrate binding domain GT347_24620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_24625 PF03328 HpcH/HpaI aldolase/citrate lyase family GT347_24630 PF01842 ACT domain GT347_24630 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GT347_24630 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GT347_24635 PF03401 Tripartite tricarboxylate transporter family receptor GT347_24640 PF08666 SAF domain GT347_24640 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus GT347_24645 PF03401 Tripartite tricarboxylate transporter family receptor GT347_24650 PF00180 Isocitrate/isopropylmalate dehydrogenase GT347_24655 PF03466 LysR substrate binding domain GT347_24655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_24660 PF03401 Tripartite tricarboxylate transporter family receptor GT347_24665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_24665 PF03466 LysR substrate binding domain GT347_24670 PF01266 FAD dependent oxidoreductase GT347_24680 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GT347_24700 PF01863 Protein of unknown function DUF45 GT347_24705 PF02668 Taurine catabolism dioxygenase TauD, TfdA family GT347_24710 PF02770 Acyl-CoA dehydrogenase, middle domain GT347_24710 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GT347_24710 PF08028 Acyl-CoA dehydrogenase, C-terminal domain GT347_24715 PF00005 ABC transporter GT347_24715 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GT347_24725 PF00528 Binding-protein-dependent transport system inner membrane component GT347_24730 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GT347_24740 PF00296 Luciferase-like monooxygenase GT347_24750 PF03401 Tripartite tricarboxylate transporter family receptor GT347_24760 PF01557 Fumarylacetoacetate (FAA) hydrolase family GT347_24765 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GT347_24765 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GT347_24775 PF00691 OmpA family GT347_24800 PF00072 Response regulator receiver domain GT347_24800 PF00196 Bacterial regulatory proteins, luxR family GT347_24805 PF01402 Ribbon-helix-helix protein, copG family GT347_24805 PF08753 NikR C terminal nickel binding domain GT347_24815 PF00069 Protein kinase domain GT347_24815 PF03793 PASTA domain GT347_24820 PF00672 HAMP domain GT347_24820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GT347_24820 PF02743 Cache domain GT347_24845 PF07992 Pyridine nucleotide-disulphide oxidoreductase GT347_24855 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GT347_24855 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GT347_24860 PF09339 IclR helix-turn-helix domain GT347_24860 PF01614 Bacterial transcriptional regulator GT347_24865 PF01244 Membrane dipeptidase (Peptidase family M19) GT347_24870 PF03401 Tripartite tricarboxylate transporter family receptor GT347_24875 PF01266 FAD dependent oxidoreductase GT347_24895 PF03401 Tripartite tricarboxylate transporter family receptor GT347_24915 PF02203 Tar ligand binding domain homologue GT347_24915 PF00672 HAMP domain GT347_24915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GT347_24940 PF02310 B12 binding domain GT347_24940 PF01642 Methylmalonyl-CoA mutase GT347_24955 PF13439 Glycosyltransferase Family 4 GT347_24955 PF00534 Glycosyl transferases group 1 GT347_24960 PF00586 AIR synthase related protein, N-terminal domain GT347_24960 PF02769 AIR synthase related protein, C-terminal domain GT347_24975 PF00795 Carbon-nitrogen hydrolase GT347_24985 PF00392 Bacterial regulatory proteins, gntR family GT347_24985 PF00155 Aminotransferase class I and II GT347_24990 PF00171 Aldehyde dehydrogenase family GT347_24995 PF00180 Isocitrate/isopropylmalate dehydrogenase GT347_25005 PF01494 FAD binding domain GT347_25010 PF03401 Tripartite tricarboxylate transporter family receptor GT347_25020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_25020 PF03466 LysR substrate binding domain GT347_25040 PF14834 Glutathione S-transferase, C-terminal domain GT347_25040 PF02798 Glutathione S-transferase, N-terminal domain GT347_25065 PF13677 Membrane MotB of proton-channel complex MotA/MotB GT347_25065 PF00691 OmpA family GT347_25105 PF04717 Type VI secretion system, phage-baseplate injector GT347_25105 PF16671 Actin cross-linking domain GT347_25110 PF00004 ATPase family associated with various cellular activities (AAA) GT347_25110 PF07724 AAA domain (Cdc48 subfamily) GT347_25110 PF17871 AAA lid domain GT347_25110 PF10431 C-terminal, D2-small domain, of ClpB protein GT347_25175 PF00069 Protein kinase domain GT347_25220 PF01292 Prokaryotic cytochrome b561 GT347_25225 PF00174 Oxidoreductase molybdopterin binding domain GT347_25235 PF08281 Sigma-70, region 4 GT347_25235 PF04542 Sigma-70 region 2 GT347_25240 PF06532 Negative regulator of sigma F GT347_25255 PF01381 Helix-turn-helix GT347_25270 PF00529 HlyD membrane-fusion protein of T1SS GT347_25270 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GT347_25275 PF00873 AcrB/AcrD/AcrF family GT347_25280 PF02321 Outer membrane efflux protein GT347_25280 PF08139 Prokaryotic membrane lipoprotein lipid attachment site GT347_25285 PF00654 Voltage gated chloride channel GT347_25290 PF03601 Conserved hypothetical protein 698 GT347_25295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_25295 PF03466 LysR substrate binding domain GT347_25310 PF03401 Tripartite tricarboxylate transporter family receptor GT347_25330 PF02424 ApbE family GT347_25350 PF03466 LysR substrate binding domain GT347_25350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_25355 PF03401 Tripartite tricarboxylate transporter family receptor GT347_25360 PF07969 Amidohydrolase family GT347_25365 PF01757 Acyltransferase family GT347_25370 PF00593 TonB dependent receptor GT347_25370 PF07715 TonB-dependent Receptor Plug Domain GT347_25375 PF18331 PKHD-type hydroxylase C-terminal domain GT347_25375 PF13640 2OG-Fe(II) oxygenase superfamily GT347_25390 PF02515 CoA-transferase family III GT347_25395 PF03401 Tripartite tricarboxylate transporter family receptor GT347_25400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_25400 PF03466 LysR substrate binding domain GT347_25405 PF00378 Enoyl-CoA hydratase/isomerase GT347_25410 PF02515 CoA-transferase family III GT347_25415 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GT347_25415 PF02770 Acyl-CoA dehydrogenase, middle domain GT347_25415 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GT347_25435 PF00255 Glutathione peroxidase GT347_25445 PF00528 Binding-protein-dependent transport system inner membrane component GT347_25450 PF03180 NLPA lipoprotein GT347_25455 PF00132 Bacterial transferase hexapeptide (six repeats) GT347_25490 PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus GT347_25490 PF05175 Methyltransferase small domain GT347_25510 PF00990 Diguanylate cyclase, GGDEF domain GT347_25510 PF05230 MASE2 domain GT347_25515 PF13417 Glutathione S-transferase, N-terminal domain GT347_25515 PF00043 Glutathione S-transferase, C-terminal domain GT347_25535 PF00596 Class II Aldolase and Adducin N-terminal domain GT347_25540 PF00155 Aminotransferase class I and II GT347_25540 PF00392 Bacterial regulatory proteins, gntR family GT347_25545 PF00892 EamA-like transporter family GT347_25550 PF01244 Membrane dipeptidase (Peptidase family M19) GT347_25560 PF00990 Diguanylate cyclase, GGDEF domain GT347_25560 PF03707 Bacterial signalling protein N terminal repeat GT347_25560 PF00563 EAL domain GT347_25575 PF03401 Tripartite tricarboxylate transporter family receptor GT347_25580 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GT347_25580 PF13378 Enolase C-terminal domain-like GT347_25585 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GT347_25585 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GT347_25585 PF01842 ACT domain GT347_25620 PF01494 FAD binding domain GT347_25645 PF00990 Diguanylate cyclase, GGDEF domain GT347_25645 PF03707 Bacterial signalling protein N terminal repeat GT347_25645 PF00563 EAL domain GT347_25655 PF07804 HipA-like C-terminal domain GT347_25655 PF13657 HipA N-terminal domain GT347_25665 PF00072 Response regulator receiver domain GT347_25665 PF13426 PAS domain GT347_25665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_25695 PF07969 Amidohydrolase family GT347_25705 PF02678 Pirin GT347_25705 PF17954 Quercetinase C-terminal cupin domain GT347_25710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_25710 PF03466 LysR substrate binding domain GT347_25720 PF01966 HD domain GT347_25735 PF00005 ABC transporter GT347_25735 PF08402 TOBE domain GT347_25740 PF00528 Binding-protein-dependent transport system inner membrane component GT347_25755 PF13419 Haloacid dehalogenase-like hydrolase GT347_25765 PF04303 PrpF protein GT347_25770 PF01638 HxlR-like helix-turn-helix GT347_25775 PF05368 NmrA-like family GT347_25785 PF04542 Sigma-70 region 2 GT347_25785 PF08281 Sigma-70, region 4 GT347_25785 PF12680 SnoaL-like domain GT347_25795 PF02423 Ornithine cyclodeaminase/mu-crystallin family GT347_25800 PF00291 Pyridoxal-phosphate dependent enzyme GT347_25825 PF03060 Nitronate monooxygenase GT347_25835 PF00171 Aldehyde dehydrogenase family GT347_25845 PF03401 Tripartite tricarboxylate transporter family receptor GT347_25855 PF00384 Molybdopterin oxidoreductase GT347_25860 PF04397 LytTr DNA-binding domain GT347_25860 PF00072 Response regulator receiver domain GT347_25865 PF06580 Histidine kinase GT347_25865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_25865 PF07694 5TMR of 5TMR-LYT GT347_25880 PF02673 Bacitracin resistance protein BacA GT347_25895 PF05188 MutS domain II GT347_25895 PF01624 MutS domain I GT347_25895 PF05190 MutS family domain IV GT347_25895 PF05192 MutS domain III GT347_25895 PF00488 MutS domain V GT347_25915 PF14602 Hexapeptide repeat of succinyl-transferase GT347_25915 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle GT347_25930 PF12805 FUSC-like inner membrane protein yccS GT347_25935 PF00459 Inositol monophosphatase family GT347_25940 PF00588 SpoU rRNA Methylase family GT347_25945 PF00132 Bacterial transferase hexapeptide (six repeats) GT347_25955 PF03401 Tripartite tricarboxylate transporter family receptor GT347_25960 PF00994 Probable molybdopterin binding domain GT347_25965 PF04751 Protein of unknown function (DUF615) GT347_25970 PF01523 Putative modulator of DNA gyrase GT347_25985 PF01165 Ribosomal protein S21 GT347_25995 PF00920 Dehydratase family GT347_26000 PF03328 HpcH/HpaI aldolase/citrate lyase family GT347_26005 PF03401 Tripartite tricarboxylate transporter family receptor GT347_26010 PF00356 Bacterial regulatory proteins, lacI family GT347_26015 PF00356 Bacterial regulatory proteins, lacI family GT347_26030 PF00528 Binding-protein-dependent transport system inner membrane component GT347_26035 PF00528 Binding-protein-dependent transport system inner membrane component GT347_26040 PF08240 Alcohol dehydrogenase GroES-like domain GT347_26040 PF00107 Zinc-binding dehydrogenase GT347_26045 PF03459 TOBE domain GT347_26045 PF17912 MalK OB fold domain GT347_26045 PF00005 ABC transporter GT347_26050 PF00294 pfkB family carbohydrate kinase GT347_26055 PF01791 DeoC/LacD family aldolase GT347_26060 PF01925 Sulfite exporter TauE/SafE GT347_26065 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GT347_26065 PF13378 Enolase C-terminal domain-like GT347_26070 PF00392 Bacterial regulatory proteins, gntR family GT347_26070 PF07702 UTRA domain GT347_26075 PF03401 Tripartite tricarboxylate transporter family receptor GT347_26080 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GT347_26085 PF02885 Glycosyl transferase family, helical bundle domain GT347_26085 PF00591 Glycosyl transferase family, a/b domain GT347_26090 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GT347_26090 PF00384 Molybdopterin oxidoreductase GT347_26090 PF01568 Molydopterin dinucleotide binding domain GT347_26100 PF01011 PQQ enzyme repeat GT347_26105 PF00005 ABC transporter GT347_26110 PF00528 Binding-protein-dependent transport system inner membrane component GT347_26125 PF03861 ANTAR domain GT347_26125 PF08376 Nitrate and nitrite sensing GT347_26135 PF00814 Glycoprotease family GT347_26145 PF13458 Periplasmic binding protein GT347_26155 PF00312 Ribosomal protein S15 GT347_26160 PF03725 3' exoribonuclease family, domain 2 GT347_26160 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain GT347_26160 PF00013 KH domain GT347_26160 PF01138 3' exoribonuclease family, domain 1 GT347_26160 PF00575 S1 RNA binding domain GT347_26165 PF14765 Polyketide synthase dehydratase GT347_26165 PF00550 Phosphopantetheine attachment site GT347_26165 PF08659 KR domain GT347_26165 PF02801 Beta-ketoacyl synthase, C-terminal domain GT347_26165 PF00109 Beta-ketoacyl synthase, N-terminal domain GT347_26165 PF16197 Ketoacyl-synthetase C-terminal extension GT347_26165 PF08240 Alcohol dehydrogenase GroES-like domain GT347_26165 PF00698 Acyl transferase domain GT347_26170 PF00121 Triosephosphate isomerase GT347_26175 PF03840 Preprotein translocase SecG subunit GT347_26185 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 GT347_26190 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit GT347_26195 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit GT347_26200 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit GT347_26210 PF10531 SLBB domain GT347_26210 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region GT347_26210 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit GT347_26215 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region GT347_26215 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal GT347_26215 PF00384 Molybdopterin oxidoreductase GT347_26220 PF00146 NADH dehydrogenase GT347_26225 PF12838 4Fe-4S dicluster domain GT347_26230 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 GT347_26235 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L GT347_26240 PF00361 Proton-conducting membrane transporter GT347_26240 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus GT347_26245 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus GT347_26245 PF00361 Proton-conducting membrane transporter GT347_26250 PF00361 Proton-conducting membrane transporter GT347_26260 PF00293 NUDIX domain GT347_26275 PF05532 CsbD-like GT347_26285 PF01053 Cys/Met metabolism PLP-dependent enzyme GT347_26290 PF13472 GDSL-like Lipase/Acylhydrolase family GT347_26295 PF00005 ABC transporter GT347_26300 PF00588 SpoU rRNA Methylase family GT347_26300 PF08032 RNA 2'-O ribose methyltransferase substrate binding GT347_26305 PF13406 Transglycosylase SLT domain GT347_26310 PF11992 Domain of unknown function (DUF3488) GT347_26310 PF13559 Domain of unknown function (DUF4129) GT347_26310 PF01841 Transglutaminase-like superfamily GT347_26320 PF17863 AAA lid domain GT347_26320 PF07726 ATPase family associated with various cellular activities (AAA) GT347_26325 PF00850 Histone deacetylase domain GT347_26330 PF00924 Mechanosensitive ion channel GT347_26330 PF12795 Mechanosensitive ion channel porin domain GT347_26330 PF12794 Mechanosensitive ion channel inner membrane domain 1 GT347_26335 PF01012 Electron transfer flavoprotein domain GT347_26340 PF00766 Electron transfer flavoprotein FAD-binding domain GT347_26340 PF01012 Electron transfer flavoprotein domain GT347_26355 PF00885 6,7-dimethyl-8-ribityllumazine synthase GT347_26365 PF01545 Cation efflux family GT347_26370 PF13478 XdhC Rossmann domain GT347_26370 PF02625 XdhC and CoxI family GT347_26380 PF02203 Tar ligand binding domain homologue GT347_26380 PF00672 HAMP domain GT347_26380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GT347_26385 PF14765 Polyketide synthase dehydratase GT347_26385 PF16197 Ketoacyl-synthetase C-terminal extension GT347_26385 PF00109 Beta-ketoacyl synthase, N-terminal domain GT347_26385 PF02801 Beta-ketoacyl synthase, C-terminal domain GT347_26385 PF08659 KR domain GT347_26385 PF08240 Alcohol dehydrogenase GroES-like domain GT347_26385 PF00698 Acyl transferase domain GT347_26385 PF00550 Phosphopantetheine attachment site GT347_26405 PF00593 TonB dependent receptor GT347_26405 PF07715 TonB-dependent Receptor Plug Domain GT347_26430 PF01722 BolA-like protein GT347_26435 PF04279 Intracellular septation protein A GT347_26440 PF01641 SelR domain GT347_26445 PF02696 Uncharacterized ACR, YdiU/UPF0061 family GT347_26455 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain GT347_26455 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family GT347_26460 PF00472 RF-1 domain GT347_26475 PF07690 Major Facilitator Superfamily GT347_26480 PF03971 Monomeric isocitrate dehydrogenase GT347_26485 PF13404 AsnC-type helix-turn-helix domain GT347_26485 PF01037 Lrp/AsnC ligand binding domain GT347_26490 PF01053 Cys/Met metabolism PLP-dependent enzyme GT347_26495 PF13454 FAD-NAD(P)-binding GT347_26520 PF03401 Tripartite tricarboxylate transporter family receptor GT347_26530 PF00528 Binding-protein-dependent transport system inner membrane component GT347_26535 PF00528 Binding-protein-dependent transport system inner membrane component GT347_26540 PF00497 Bacterial extracellular solute-binding proteins, family 3 GT347_26555 PF01070 FMN-dependent dehydrogenase GT347_26565 PF00582 Universal stress protein family GT347_26570 PF00106 short chain dehydrogenase GT347_26575 PF00849 RNA pseudouridylate synthase GT347_26580 PF00512 His Kinase A (phospho-acceptor) domain GT347_26580 PF08448 PAS fold GT347_26580 PF00072 Response regulator receiver domain GT347_26580 PF13188 PAS domain GT347_26580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT347_26585 PF00561 alpha/beta hydrolase fold GT347_26595 PF01546 Peptidase family M20/M25/M40 GT347_26595 PF07687 Peptidase dimerisation domain GT347_26605 PF14437 MafB19-like deaminase GT347_26610 PF17676 LD-carboxypeptidase C-terminal domain GT347_26610 PF02016 LD-carboxypeptidase N-terminal domain GT347_26615 PF02558 Ketopantoate reductase PanE/ApbA GT347_26615 PF08546 Ketopantoate reductase PanE/ApbA C terminal GT347_26635 PF01202 Shikimate kinase GT347_26640 PF07690 Major Facilitator Superfamily GT347_26650 PF03401 Tripartite tricarboxylate transporter family receptor GT347_26665 PF03466 LysR substrate binding domain GT347_26665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_26675 PF12318 Membrane bound FAD containing D-sorbitol dehydrogenase GT347_26680 PF05199 GMC oxidoreductase GT347_26680 PF00732 GMC oxidoreductase GT347_26685 PF00034 Cytochrome c GT347_26685 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GT347_26700 PF10415 Fumarase C C-terminus GT347_26700 PF00206 Lyase GT347_26705 PF03401 Tripartite tricarboxylate transporter family receptor GT347_26710 PF00206 Lyase GT347_26710 PF10397 Adenylosuccinate lyase C-terminus GT347_26715 PF07702 UTRA domain GT347_26715 PF00392 Bacterial regulatory proteins, gntR family GT347_26735 PF07995 Glucose / Sorbosone dehydrogenase GT347_26760 PF03401 Tripartite tricarboxylate transporter family receptor GT347_26775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_26775 PF03466 LysR substrate binding domain GT347_26780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_26780 PF03466 LysR substrate binding domain GT347_26790 PF05378 Hydantoinase/oxoprolinase N-terminal region GT347_26790 PF01968 Hydantoinase/oxoprolinase GT347_26795 PF03480 Bacterial extracellular solute-binding protein, family 7 GT347_26805 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GT347_26815 PF00106 short chain dehydrogenase GT347_26820 PF04115 Ureidoglycolate lyase GT347_26825 PF07729 FCD domain GT347_26825 PF00392 Bacterial regulatory proteins, gntR family GT347_26835 PF03401 Tripartite tricarboxylate transporter family receptor GT347_26840 PF03358 NADPH-dependent FMN reductase GT347_26845 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain GT347_26845 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase GT347_26850 PF03450 CO dehydrogenase flavoprotein C-terminal domain GT347_26850 PF00941 FAD binding domain in molybdopterin dehydrogenase GT347_26855 PF00111 2Fe-2S iron-sulfur cluster binding domain GT347_26855 PF01799 [2Fe-2S] binding domain GT347_26865 PF00583 Acetyltransferase (GNAT) family GT347_26870 PF00753 Metallo-beta-lactamase superfamily GT347_26880 PF01738 Dienelactone hydrolase family GT347_26885 PF00034 Cytochrome c GT347_26885 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GT347_26890 PF05199 GMC oxidoreductase GT347_26890 PF00732 GMC oxidoreductase GT347_26895 PF13618 Gluconate 2-dehydrogenase subunit 3 GT347_26900 PF00483 Nucleotidyl transferase GT347_26905 PF03401 Tripartite tricarboxylate transporter family receptor GT347_26910 PF03401 Tripartite tricarboxylate transporter family receptor GT347_26915 PF03401 Tripartite tricarboxylate transporter family receptor GT347_26920 PF03972 MmgE/PrpD family GT347_26925 PF04303 PrpF protein GT347_26930 PF00694 Aconitase C-terminal domain GT347_26935 PF00330 Aconitase family (aconitate hydratase) GT347_26945 PF07702 UTRA domain GT347_26945 PF00392 Bacterial regulatory proteins, gntR family GT347_26965 PF01027 Inhibitor of apoptosis-promoting Bax1 GT347_26975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT347_26975 PF03466 LysR substrate binding domain GT347_26995 PF00296 Luciferase-like monooxygenase GT347_27000 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GT347_27000 PF00005 ABC transporter GT347_27010 PF00528 Binding-protein-dependent transport system inner membrane component GT347_27015 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GT347_27035 PF16916 Dimerisation domain of Zinc Transporter GT347_27035 PF01545 Cation efflux family GT347_27045 PF03401 Tripartite tricarboxylate transporter family receptor GT347_27050 PF03401 Tripartite tricarboxylate transporter family receptor GT347_27055 PF08240 Alcohol dehydrogenase GroES-like domain GT347_27055 PF02801 Beta-ketoacyl synthase, C-terminal domain GT347_27055 PF14765 Polyketide synthase dehydratase GT347_27055 PF00550 Phosphopantetheine attachment site GT347_27055 PF00698 Acyl transferase domain GT347_27055 PF16197 Ketoacyl-synthetase C-terminal extension GT347_27055 PF08659 KR domain GT347_27055 PF00109 Beta-ketoacyl synthase, N-terminal domain GT347_27065 PF02515 CoA-transferase family III GT347_27070 PF00392 Bacterial regulatory proteins, gntR family GT347_27070 PF07729 FCD domain GT347_27080 PF00893 Small Multidrug Resistance protein GT347_27090 PF07690 Major Facilitator Superfamily GT347_27095 PF01638 HxlR-like helix-turn-helix GT347_27120 PF01026 TatD related DNase GT347_27135 PF02223 Thymidylate kinase GT347_27140 PF02618 YceG-like family GT347_27145 PF00376 MerR family regulatory protein GT347_27145 PF13614 AAA domain GT347_27175 PF00239 Resolvase, N terminal domain GT347_27175 PF02796 Helix-turn-helix domain of resolvase GT347_27210 PF11798 IMS family HHH motif GT347_27210 PF13438 Domain of unknown function (DUF4113) GT347_27210 PF00817 impB/mucB/samB family GT347_27210 PF11799 impB/mucB/samB family C-terminal domain GT347_27215 PF00717 Peptidase S24-like GT347_27230 PF02796 Helix-turn-helix domain of resolvase GT347_27230 PF00239 Resolvase, N terminal domain