locus-tag class description CH48_1 IPR017824 Aminodeoxychorismate lyase, class IV CH48_1 IPR018300 Aminotransferase, class IV, conserved site CH48_1 IPR036038 Aminotransferase-like, PLP-dependent enzymes CH48_1 IPR001544 Aminotransferase class IV CH48_10 IPR029001 Inosine triphosphate pyrophosphatase-like CH48_10 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein CH48_100 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase CH48_100 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH48_1000 IPR005583 Peroxide stress protein YaaA CH48_1002 IPR029144 Threonine synthase, N-terminal CH48_1002 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CH48_1002 IPR004450 Threonine synthase-like CH48_1002 IPR037158 Threonine synthase, N-terminal domain superfamily CH48_1002 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site CH48_1002 IPR001926 Pyridoxal-phosphate dependent enzyme CH48_1003 IPR006204 GHMP kinase N-terminal domain CH48_1003 IPR013750 GHMP kinase, C-terminal domain CH48_1003 IPR036554 GHMP kinase, C-terminal domain superfamily CH48_1003 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CH48_1003 IPR020568 Ribosomal protein S5 domain 2-type fold CH48_1003 IPR000870 Homoserine kinase CH48_1003 IPR006203 GHMP kinase, ATP-binding, conserved site CH48_1004 IPR018042 Aspartate kinase, conserved site CH48_1004 IPR001341 Aspartate kinase CH48_1004 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I CH48_1004 IPR041743 Bifunctional aspartokinase/homoserine dehydrogenase, N-terminal catalytic domain CH48_1004 IPR001048 Aspartate/glutamate/uridylate kinase CH48_1004 IPR019811 Homoserine dehydrogenase, conserved site CH48_1004 IPR036291 NAD(P)-binding domain superfamily CH48_1004 IPR027795 CASTOR, ACT domain CH48_1004 IPR002912 ACT domain CH48_1004 IPR036393 Acetylglutamate kinase-like superfamily CH48_1004 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding CH48_1004 IPR001342 Homoserine dehydrogenase, catalytic CH48_1005 IPR016032 Signal transduction response regulator, C-terminal effector CH48_1005 IPR001867 OmpR/PhoB-type DNA-binding domain CH48_1005 IPR011006 CheY-like superfamily CH48_1005 IPR001789 Signal transduction response regulator, receiver domain CH48_1005 IPR039420 Transcriptional regulatory protein WalR-like CH48_1005 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_1006 IPR010292 Uncharacterised protein family CreA CH48_1007 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site CH48_1007 IPR029033 Histidine phosphatase superfamily CH48_1007 IPR023086 Phosphoglycerate mutase, GpmB, probable CH48_1007 IPR013078 Histidine phosphatase superfamily, clade-1 CH48_1008 IPR010499 Bacterial transcription activator, effector binding CH48_1008 IPR020449 Transcription regulator HTH, AraC- type CH48_1008 IPR011256 Regulatory factor, effector binding domain superfamily CH48_1008 IPR018062 HTH domain AraC-type, conserved site CH48_1008 IPR018060 DNA binding HTH domain, AraC-type CH48_1008 IPR029442 GyrI-like small molecule binding domain CH48_1008 IPR009057 Homeobox-like domain superfamily CH48_1009 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 CH48_1009 IPR002786 Inosine/xanthosine triphosphatase CH48_1009 IPR029001 Inosine triphosphate pyrophosphatase-like CH48_101 IPR003848 Domain of unknown function DUF218 CH48_1010 IPR000831 Trp repressor CH48_1010 IPR013335 Trp repressor, bacterial CH48_1010 IPR038116 TrpR-like superfamily CH48_1010 IPR010921 Trp repressor/replication initiator CH48_1011 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily CH48_1011 IPR012289 Lytic transglycosylase, superhelical linker CH48_1011 IPR008939 Lytic transglycosylase, superhelical U-shaped CH48_1011 IPR000189 Prokaryotic transglycosylase, active site CH48_1011 IPR008258 Transglycosylase SLT domain 1 CH48_1011 IPR023346 Lysozyme-like domain superfamily CH48_1012 IPR023214 HAD superfamily CH48_1012 IPR036412 HAD-like superfamily CH48_1012 IPR008250 P-type ATPase, A domain superfamily CH48_1012 IPR001757 P-type ATPase CH48_1012 IPR018303 P-type ATPase, phosphorylation site CH48_1012 IPR023299 P-type ATPase, cytoplasmic domain N CH48_1012 IPR004014 Cation-transporting P-type ATPase, N-terminal CH48_1012 IPR006068 Cation-transporting P-type ATPase, C-terminal CH48_1012 IPR023298 P-type ATPase, transmembrane domain superfamily CH48_1014 IPR003660 HAMP domain CH48_1014 IPR033417 Periplasmic sensor domain CHASE8 CH48_1014 IPR000160 GGDEF domain CH48_1014 IPR029787 Nucleotide cyclase CH48_1015 IPR006665 OmpA-like domain CH48_1015 IPR006664 Outer membrane protein, bacterial CH48_1015 IPR036737 OmpA-like domain superfamily CH48_1016 IPR017871 ABC transporter, conserved site CH48_1016 IPR022374 Energy-dependent translational throttle protein EttA CH48_1016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1016 IPR003439 ABC transporter-like CH48_1016 IPR003593 AAA+ ATPase domain CH48_1016 IPR032781 ABC-transporter extension domain CH48_1018 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_1018 IPR000847 Transcription regulator HTH, LysR CH48_1018 IPR005119 LysR, substrate-binding CH48_1018 IPR036390 Winged helix DNA-binding domain superfamily CH48_1019 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1019 IPR001387 Cro/C1-type helix-turn-helix domain CH48_1019 IPR006417 Nicotinamide-nucleotide adenylyltransferase CH48_1019 IPR041749 NadR, nicotinamide/nicotinate mononucleotide adenylyltransferase domain CH48_1019 IPR016429 NAD biosynthesis/regulator protein NadR CH48_1019 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CH48_1019 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH48_1019 IPR004821 Cytidyltransferase-like domain CH48_1019 IPR038727 NadR/Ttd14, AAA domain CH48_102 IPR002575 Aminoglycoside phosphotransferase CH48_102 IPR011009 Protein kinase-like domain superfamily CH48_1020 IPR013149 Alcohol dehydrogenase, C-terminal CH48_1020 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site CH48_1020 IPR020843 Polyketide synthase, enoylreductase domain CH48_1020 IPR036291 NAD(P)-binding domain superfamily CH48_1020 IPR011032 GroES-like superfamily CH48_1020 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 CH48_1020 IPR013154 Alcohol dehydrogenase, N-terminal CH48_1021 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1021 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain CH48_1021 IPR020568 Ribosomal protein S5 domain 2-type fold CH48_1021 IPR041166 LapB, rubredoxin metal binding domain CH48_1021 IPR004504 DNA repair protein RadA CH48_1021 IPR003593 AAA+ ATPase domain CH48_1021 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CH48_1022 IPR041449 Phosphoserine phosphatase, N-terminal CH48_1022 IPR023190 Phosphoserine phosphatase, domain 2 CH48_1022 IPR036412 HAD-like superfamily CH48_1022 IPR023214 HAD superfamily CH48_1023 IPR019305 Uncharacterised protein family Smp CH48_1024 IPR004402 Purine nucleoside phosphorylase DeoD-type CH48_1024 IPR018016 Nucleoside phosphorylase, conserved site CH48_1024 IPR000845 Nucleoside phosphorylase domain CH48_1024 IPR035994 Nucleoside phosphorylase superfamily CH48_1025 IPR006124 Metalloenzyme CH48_1025 IPR010045 Phosphopentomutase CH48_1025 IPR017850 Alkaline-phosphatase-like, core domain superfamily CH48_1025 IPR024052 Phosphopentomutase DeoB cap domain superfamily CH48_1026 IPR000312 Glycosyl transferase, family 3 CH48_1026 IPR017459 Glycosyl transferase family 3, N-terminal domain CH48_1026 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site CH48_1026 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily CH48_1026 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily CH48_1026 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal CH48_1026 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic CH48_1026 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase CH48_1026 IPR013465 Thymidine phosphorylase CH48_1026 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily CH48_1027 IPR011343 Deoxyribose-phosphate aldolase CH48_1027 IPR002915 DeoC/FbaB/ lacD aldolase CH48_1027 IPR023649 Deoxyribose-phosphate aldolase type II CH48_1027 IPR013785 Aldolase-type TIM barrel CH48_1028 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain CH48_1028 IPR002668 Concentrative nucleoside transporter N-terminal domain CH48_1028 IPR011657 Concentrative nucleoside transporter C-terminal domain CH48_1028 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial CH48_1028 IPR008276 Concentrative nucleoside transporter CH48_1029 IPR018228 Deoxyribonuclease, TatD-related, conserved site CH48_1029 IPR032466 Metal-dependent hydrolase CH48_1029 IPR001130 TatD family CH48_103 IPR003329 Acylneuraminate cytidylyltransferase CH48_103 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase CH48_103 IPR029044 Nucleotide-diphospho-sugar transferases CH48_1030 IPR002641 Patatin-like phospholipase domain CH48_1030 IPR037483 YjjU-like CH48_1030 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CH48_1031 IPR009760 Protein of unknown function DUF1328 CH48_1032 IPR014004 Transport-associated and nodulation domain, bacteria CH48_1032 IPR007055 BON domain CH48_1033 IPR031157 Tr-type G domain, conserved site CH48_1033 IPR041732 Peptide chain release factor 3, GTP-binding domain CH48_1033 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1033 IPR004548 Peptide chain release factor 3 CH48_1033 IPR032090 Peptide chain release factor 3, C-terminal CH48_1033 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily CH48_1033 IPR035647 EF-G domain III/V-like CH48_1033 IPR004161 Translation elongation factor EFTu-like, domain 2 CH48_1033 IPR005225 Small GTP-binding protein domain CH48_1033 IPR000795 Transcription factor, GTP-binding domain CH48_1033 IPR009000 Translation protein, beta-barrel domain superfamily CH48_1034 IPR016181 Acyl-CoA N-acyltransferase CH48_1034 IPR006464 N-acetyltransferase RimI/Ard1 CH48_1034 IPR000182 GNAT domain CH48_1035 IPR004615 DNA polymerase III, psi subunit CH48_1035 IPR036654 DNA polymerase III, psi subunit superfamily CH48_1035 IPR018382 DNA polymerase III, psi subunit, subgroup CH48_1036 IPR023543 rRNA small subunit methyltransferase C CH48_1036 IPR013675 Methyltransferase small, N-terminal CH48_1036 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CH48_1036 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH48_1036 IPR007848 Methyltransferase small domain CH48_1037 IPR020471 Aldo/keto reductase CH48_1037 IPR036812 NADP-dependent oxidoreductase domain superfamily CH48_1037 IPR018170 Aldo/keto reductase, conserved site CH48_1037 IPR023210 NADP-dependent oxidoreductase domain CH48_1038 IPR036390 Winged helix DNA-binding domain superfamily CH48_1038 IPR000847 Transcription regulator HTH, LysR CH48_1038 IPR005119 LysR, substrate-binding CH48_1038 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_104 IPR005651 Trm112-like CH48_1041 IPR009885 Protein of unknown function DUF1435 CH48_1042 IPR039435 Diguanylate cyclase DosC, globin sensor domain CH48_1042 IPR029787 Nucleotide cyclase CH48_1042 IPR000160 GGDEF domain CH48_1042 IPR012292 Globin/Protoglobin CH48_1042 IPR009050 Globin-like superfamily CH48_1043 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CH48_1043 IPR012910 TonB-dependent receptor, plug domain CH48_1043 IPR037066 TonB-dependent receptor, plug domain superfamily CH48_1043 IPR011662 Secretin/TonB, short N-terminal domain CH48_1043 IPR010105 TonB-dependent siderophore receptor CH48_1043 IPR000531 TonB-dependent receptor-like, beta-barrel CH48_1043 IPR010916 TonB box, conserved site CH48_1043 IPR010917 TonB-dependent receptor, conserved site CH48_1045 IPR002139 Ribokinase/fructokinase CH48_1045 IPR011611 Carbohydrate kinase PfkB CH48_1045 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CH48_1045 IPR029056 Ribokinase-like CH48_1046 IPR003192 Porin, LamB-type CH48_1046 IPR021570 LamB-type porin N-terminal domain CH48_1046 IPR036998 Porin, LamB-type superfamily CH48_1047 IPR003352 Phosphotransferase system, EIIC CH48_1047 IPR036878 Glucose permease domain IIB CH48_1047 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site CH48_1047 IPR013013 Phosphotransferase system, EIIC component, type 1 CH48_1047 IPR001996 Phosphotransferase system, IIB component, type 1 CH48_1047 IPR010973 Phosphotransferase system, sucrose-specific IIBC component CH48_1047 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component CH48_1048 IPR013189 Glycosyl hydrolase family 32, C-terminal CH48_1048 IPR001362 Glycoside hydrolase, family 32 CH48_1048 IPR013148 Glycosyl hydrolase family 32, N-terminal CH48_1048 IPR018053 Glycoside hydrolase, family 32, active site CH48_1048 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily CH48_1048 IPR006232 Sucrose-6-phosphate hydrolase CH48_1048 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily CH48_1049 IPR028082 Periplasmic binding protein-like I CH48_1049 IPR025997 Periplasmic binding protein CH48_1049 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CH48_1049 IPR000843 LacI-type HTH domain CH48_1049 IPR012781 D-fructose-responsive transcription factor CH48_105 IPR011129 Cold shock domain CH48_105 IPR002059 Cold-shock protein, DNA-binding CH48_105 IPR012340 Nucleic acid-binding, OB-fold CH48_105 IPR012156 Cold shock, CspA CH48_105 IPR019844 Cold-shock (CSD) domain CH48_1050 IPR003593 AAA+ ATPase domain CH48_1050 IPR000014 PAS domain CH48_1050 IPR035965 PAS domain superfamily CH48_1050 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1050 IPR013767 PAS fold CH48_1050 IPR002078 RNA polymerase sigma factor 54 interaction domain CH48_1050 IPR002197 DNA binding HTH domain, Fis-type CH48_1050 IPR009057 Homeobox-like domain superfamily CH48_1050 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CH48_1050 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CH48_1050 IPR029016 GAF-like domain superfamily CH48_1051 IPR011050 Pectin lyase fold/virulence factor CH48_1051 IPR012334 Pectin lyase fold CH48_1051 IPR033131 Pectinesterase, Asp active site CH48_1051 IPR000070 Pectinesterase, catalytic CH48_1056 IPR031730 Carbamoyltransferase, C-terminal CH48_1056 IPR038152 Carbamoyltransferase, C-terminal domain superfamily CH48_1056 IPR003696 Carbamoyltransferase CH48_1058 IPR008279 PEP-utilising enzyme, mobile domain CH48_1058 IPR036637 Phosphohistidine domain superfamily CH48_1058 IPR039643 Dihydroxyacetone kinase phosphotransferase subunit DhaM CH48_1058 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CH48_1058 IPR004701 Phosphotransferase system, mannose-type IIA component CH48_1058 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily CH48_1058 IPR035895 HPr-like superfamily CH48_1058 IPR012844 Dihydroxyacetone kinase phosphotransferase subunit, N-terminal domain CH48_1058 IPR008731 Phosphotransferase system, enzyme I N-terminal CH48_1058 IPR000032 Phosphocarrier protein HPr-like CH48_1058 IPR036618 PtsI, HPr-binding domain superfamily CH48_1059 IPR004007 DhaL domain CH48_1059 IPR012737 Dihydroxyacetone kinase, subunit L CH48_1059 IPR036117 DhaL domain superfamily CH48_106 IPR012156 Cold shock, CspA CH48_106 IPR019844 Cold-shock (CSD) domain CH48_106 IPR002059 Cold-shock protein, DNA-binding CH48_106 IPR012340 Nucleic acid-binding, OB-fold CH48_106 IPR011129 Cold shock domain CH48_1060 IPR004006 DhaK domain CH48_1060 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 CH48_1061 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA CH48_1061 IPR018211 Alcohol dehydrogenase, iron-type, conserved site CH48_1061 IPR016205 Glycerol dehydrogenase CH48_1062 IPR001036 Acriflavin resistance protein CH48_1062 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CH48_1063 IPR006143 RND efflux pump, membrane fusion protein CH48_1063 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CH48_1064 IPR003876 Arginine deiminase CH48_1065 IPR002293 Amino acid/polyamine transporter I CH48_1065 IPR022461 Arginine/ornithine antiporter CH48_1065 IPR004754 Amino acid antiporter CH48_1067 IPR002201 Glycosyl transferase, family 9 CH48_1067 IPR011916 Lipopolysaccharide heptosyltransferase III, putative CH48_1068 IPR033676 Autoinducer-2 kinase CH48_1068 IPR000577 Carbohydrate kinase, FGGY CH48_1068 IPR018485 Carbohydrate kinase, FGGY, C-terminal CH48_1068 IPR018484 Carbohydrate kinase, FGGY, N-terminal CH48_1069 IPR037171 NagB/RpiA transferase-like CH48_1069 IPR012318 Crp-type HTH domain CH48_1069 IPR007324 Sugar-binding domain, putative CH48_1069 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_107 IPR009770 Domain of unknown function DUF1338 CH48_1070 IPR003439 ABC transporter-like CH48_1070 IPR017871 ABC transporter, conserved site CH48_1070 IPR003593 AAA+ ATPase domain CH48_1070 IPR030281 Autoinducer 2 import ATP-binding protein LsrA CH48_1070 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1071 IPR001851 ABC transporter, permease CH48_1072 IPR001851 ABC transporter, permease CH48_1073 IPR028082 Periplasmic binding protein-like I CH48_1073 IPR030159 Autoinducer 2 ABC transporter, substrate-binding protein LsrB CH48_1073 IPR025997 Periplasmic binding protein CH48_1074 IPR013785 Aldolase-type TIM barrel CH48_1074 IPR002915 DeoC/FbaB/ lacD aldolase CH48_1074 IPR041720 Aldolase FbaB-like, archaeal-type CH48_1074 IPR033673 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase CH48_1075 IPR033672 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase CH48_1075 IPR011008 Dimeric alpha-beta barrel CH48_1075 IPR007138 Antibiotic biosynthesis monooxygenase domain CH48_1077 IPR019637 Protein of unknown function DUF2501 CH48_1078 IPR001207 Transposase, mutator type CH48_108 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_108 IPR003758 Tetraacyldisaccharide 4'-kinase CH48_1085 IPR000182 GNAT domain CH48_1085 IPR016181 Acyl-CoA N-acyltransferase CH48_1086 IPR025202 Phospholipase D-like domain CH48_1086 IPR001736 Phospholipase D/Transphosphatidylase CH48_1086 IPR041679 DNA2/NAM7 helicase-like, AAA domain CH48_1086 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1087 IPR001584 Integrase, catalytic core CH48_1087 IPR017894 HTH domain, IS21 transposase-type CH48_1088 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CH48_1088 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1088 IPR002611 IstB-like ATP-binding protein CH48_1088 IPR003593 AAA+ ATPase domain CH48_1088 IPR001270 ClpA/B family CH48_1089 IPR001584 Integrase, catalytic core CH48_1089 IPR012337 Ribonuclease H-like superfamily CH48_1089 IPR036397 Ribonuclease H superfamily CH48_1089 IPR025948 HTH-like domain CH48_109 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_109 IPR011917 ABC transporter, lipid A export, MsbA CH48_109 IPR003593 AAA+ ATPase domain CH48_109 IPR039421 Type I protein exporter CH48_109 IPR017871 ABC transporter, conserved site CH48_109 IPR003439 ABC transporter-like CH48_109 IPR036640 ABC transporter type 1, transmembrane domain superfamily CH48_109 IPR011527 ABC transporter type 1, transmembrane domain CH48_1096 IPR005495 Permease LptG/LptF-related CH48_1096 IPR030923 LPS export ABC transporter permease LptG CH48_1097 IPR005495 Permease LptG/LptF-related CH48_1097 IPR030922 LPS export ABC transporter permease LptF CH48_1098 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal CH48_1098 IPR023042 Peptidase M17, leucine aminopeptidase CH48_1098 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal CH48_1098 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B CH48_1099 IPR036768 DNA polymerase III subunit chi superfamily CH48_1099 IPR007459 DNA polymerase III chi subunit, HolC CH48_11 IPR020103 Pseudouridine synthase, catalytic domain superfamily CH48_11 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site CH48_11 IPR006225 Pseudouridine synthase, RluC/RluD CH48_11 IPR006145 Pseudouridine synthase, RsuA/RluA CH48_11 IPR002942 RNA-binding S4 domain CH48_11 IPR036986 RNA-binding S4 domain superfamily CH48_110 IPR004477 ComEC/Rec2-related protein CH48_110 IPR004797 Competence protein ComEC/Rec2 CH48_110 IPR001279 Metallo-beta-lactamase CH48_110 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CH48_110 IPR035681 ComA-like, MBL domain CH48_1100 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain CH48_1100 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CH48_1100 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm CH48_1100 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding CH48_1100 IPR033705 Valyl tRNA synthetase, anticodon-binding domain CH48_1100 IPR002303 Valine-tRNA ligase CH48_1100 IPR002300 Aminoacyl-tRNA synthetase, class Ia CH48_1100 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm CH48_1100 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH48_1100 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily CH48_1100 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CH48_1101 IPR000182 GNAT domain CH48_1101 IPR016181 Acyl-CoA N-acyltransferase CH48_1103 IPR009671 Regulator of ribonuclease activity B domain CH48_1103 IPR036701 RraB-like superfamily CH48_1103 IPR016716 Regulator of ribonuclease activity B CH48_1104 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding CH48_1104 IPR024904 Ornithine carbamoyltransferase CH48_1104 IPR002292 Ornithine/putrescine carbamoyltransferase CH48_1104 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain CH48_1104 IPR006130 Aspartate/ornithine carbamoyltransferase CH48_1104 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily CH48_1105 IPR037012 YhcH/YjgK/YiaL superfamily CH48_1105 IPR004375 YhcH/YjgK/YiaL family CH48_1107 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CH48_1107 IPR035906 MetI-like superfamily CH48_1109 IPR003593 AAA+ ATPase domain CH48_1109 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1109 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CH48_1109 IPR017871 ABC transporter, conserved site CH48_1109 IPR003439 ABC transporter-like CH48_111 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily CH48_111 IPR005685 Integration host factor, beta subunit CH48_111 IPR020816 Histone-like DNA-binding protein, conserved site CH48_111 IPR000119 Histone-like DNA-binding protein CH48_1110 IPR003593 AAA+ ATPase domain CH48_1110 IPR003439 ABC transporter-like CH48_1110 IPR017871 ABC transporter, conserved site CH48_1110 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CH48_1110 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1111 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CH48_1111 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic CH48_1111 IPR001150 Glycine radical domain CH48_1111 IPR005144 ATP-cone domain CH48_1112 IPR001989 Radical-activating enzyme, conserved site CH48_1112 IPR034457 Organic radical-activating enzymes CH48_1112 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic CH48_1112 IPR013785 Aldolase-type TIM barrel CH48_1115 IPR036390 Winged helix DNA-binding domain superfamily CH48_1115 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily CH48_1115 IPR012702 Phosphonate C-P lyase system, transcriptional regulator PhnF CH48_1115 IPR000524 Transcription regulator HTH, GntR CH48_1115 IPR011663 UbiC transcription regulator-associated CH48_1115 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_1116 IPR009609 Phosphonate metabolism PhnG CH48_1117 IPR038058 PhnH-like superfamily CH48_1117 IPR008772 Bacterial phosphonate metabolism, PhnH CH48_1118 IPR008773 Phosphonate metabolism protein PhnI CH48_1119 IPR010306 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase CH48_1120 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1120 IPR012700 Phosphonate C-P lyase system, PhnK CH48_1120 IPR017871 ABC transporter, conserved site CH48_1120 IPR003439 ABC transporter-like CH48_1120 IPR003593 AAA+ ATPase domain CH48_1121 IPR003439 ABC transporter-like CH48_1121 IPR017871 ABC transporter, conserved site CH48_1121 IPR012701 Phosphonate C-P lyase system, PhnL CH48_1121 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1121 IPR003593 AAA+ ATPase domain CH48_1122 IPR012696 Phosphonate metabolism PhnM CH48_1122 IPR032466 Metal-dependent hydrolase CH48_1122 IPR011059 Metal-dependent hydrolase, composite domain superfamily CH48_1122 IPR013108 Amidohydrolase 3 CH48_1123 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1123 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CH48_1123 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN CH48_1123 IPR008144 Guanylate kinase-like domain CH48_1124 IPR016040 NAD(P)-binding domain CH48_1124 IPR036291 NAD(P)-binding domain superfamily CH48_1124 IPR000534 Semialdehyde dehydrogenase, NAD-binding CH48_1125 IPR017693 Phosphonate metabolism protein PhnP CH48_1125 IPR035682 Phosphonate metabolism protein, MBL domain CH48_1125 IPR001279 Metallo-beta-lactamase CH48_1125 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CH48_1126 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily CH48_1126 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family CH48_1128 IPR012349 FMN-binding split barrel CH48_1128 IPR011194 Uncharacterised protein family UPF0306 CH48_113 IPR003029 S1 domain CH48_113 IPR022967 RNA-binding domain, S1 CH48_113 IPR000110 Ribosomal protein S1 CH48_113 IPR012340 Nucleic acid-binding, OB-fold CH48_1130 IPR008995 Molybdate/tungstate binding, C-terminal CH48_1130 IPR017871 ABC transporter, conserved site CH48_1130 IPR003439 ABC transporter-like CH48_1130 IPR040582 MalK, OB fold domain CH48_1130 IPR005116 Transport-associated OB, type 1 CH48_1130 IPR003593 AAA+ ATPase domain CH48_1130 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1131 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CH48_1131 IPR035906 MetI-like superfamily CH48_1133 IPR006059 Bacterial extracellular solute-binding protein CH48_1135 IPR012480 Heparinase II/III-like CH48_1135 IPR008929 Chondroitin AC/alginate lyase CH48_1135 IPR008397 Alginate lyase domain CH48_1136 IPR027464 Ornithine decarboxylase, N-terminal CH48_1136 IPR015424 Pyridoxal phosphate-dependent transferase CH48_1136 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CH48_1136 IPR000310 Orn/Lys/Arg decarboxylase, major domain CH48_1136 IPR011193 Ornithine/lysine/arginine decarboxylase CH48_1136 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CH48_1136 IPR011006 CheY-like superfamily CH48_1136 IPR027568 Ornithine decarboxylase SpeF CH48_1136 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal CH48_1136 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily CH48_1136 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal CH48_1137 IPR002293 Amino acid/polyamine transporter I CH48_1137 IPR004754 Amino acid antiporter CH48_1137 IPR027566 Putrescine transporter PotE CH48_1138 IPR016181 Acyl-CoA N-acyltransferase CH48_1138 IPR000182 GNAT domain CH48_1139 IPR000305 GIY-YIG endonuclease CH48_1139 IPR035901 GIY-YIG endonuclease superfamily CH48_1139 IPR022992 Uncharacterised protein family UPF0213, GIY-YIG endonuclease CH48_114 IPR003136 Cytidylate kinase CH48_114 IPR011994 Cytidylate kinase domain CH48_114 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1143 IPR005130 Serine dehydratase-like, alpha subunit CH48_1143 IPR021144 Uncharacterised protein family UPF0597 CH48_1145 IPR010131 RND efflux system, outer membrane lipoprotein, NodT CH48_1145 IPR012640 Membrane lipoprotein, lipid attachment site CH48_1145 IPR003423 Outer membrane efflux protein CH48_1146 IPR019949 Luciferase family oxidoreductase, group 1 CH48_1146 IPR036661 Luciferase-like domain superfamily CH48_1146 IPR011251 Luciferase-like domain CH48_1148 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CH48_1148 IPR014014 RNA helicase, DEAD-box type, Q motif CH48_1148 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1148 IPR001650 Helicase, C-terminal CH48_1148 IPR034415 CsdA, RNA recognition motif CH48_1148 IPR014001 Helicase superfamily 1/2, ATP-binding domain CH48_1148 IPR028618 ATP-dependent RNA helicase DeaD CH48_1148 IPR011545 DEAD/DEAH box helicase domain CH48_1148 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain CH48_1148 IPR021046 Cold-shock protein, DEAD box A, C-terminal CH48_1148 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily CH48_1149 IPR023605 Lipoprotein NlpI CH48_1149 IPR013026 Tetratricopeptide repeat-containing domain CH48_1149 IPR011990 Tetratricopeptide-like helical domain superfamily CH48_1149 IPR019734 Tetratricopeptide repeat CH48_1149 IPR013105 Tetratricopeptide repeat 2 CH48_115 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site CH48_115 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase CH48_115 IPR001986 Enolpyruvate transferase domain CH48_115 IPR036968 Enolpyruvate transferase domain superfamily CH48_115 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta CH48_1150 IPR003029 S1 domain CH48_1150 IPR012162 Polyribonucleotide nucleotidyltransferase CH48_1150 IPR012340 Nucleic acid-binding, OB-fold CH48_1150 IPR022967 RNA-binding domain, S1 CH48_1150 IPR020568 Ribosomal protein S5 domain 2-type fold CH48_1150 IPR036345 Exoribonuclease, PH domain 2 superfamily CH48_1150 IPR004087 K Homology domain CH48_1150 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain CH48_1150 IPR036612 K Homology domain, type 1 superfamily CH48_1150 IPR004088 K Homology domain, type 1 CH48_1150 IPR001247 Exoribonuclease, phosphorolytic domain 1 CH48_1150 IPR015847 Exoribonuclease, phosphorolytic domain 2 CH48_1150 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily CH48_1150 IPR027408 PNPase/RNase PH domain superfamily CH48_1151 IPR005290 Ribosomal protein S15, bacterial-type CH48_1151 IPR000589 Ribosomal protein S15 CH48_1151 IPR009068 S15/NS1, RNA-binding CH48_1152 IPR020103 Pseudouridine synthase, catalytic domain superfamily CH48_1152 IPR002501 Pseudouridine synthase II, N-terminal CH48_1152 IPR015947 PUA-like superfamily CH48_1152 IPR036974 PUA domain superfamily CH48_1152 IPR014780 tRNA pseudouridine synthase II, TruB CH48_1152 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal CH48_1152 IPR032819 tRNA pseudouridylate synthase B, C-terminal CH48_1153 IPR020053 Ribosome-binding factor A, conserved site CH48_1153 IPR023799 Ribosome-binding factor A domain superfamily CH48_1153 IPR015946 K homology domain-like, alpha/beta CH48_1153 IPR000238 Ribosome-binding factor A CH48_1154 IPR004161 Translation elongation factor EFTu-like, domain 2 CH48_1154 IPR013575 Initiation factor 2 associated domain, bacterial CH48_1154 IPR006847 Translation initiation factor IF-2, N-terminal CH48_1154 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1154 IPR005225 Small GTP-binding protein domain CH48_1154 IPR000795 Transcription factor, GTP-binding domain CH48_1154 IPR000178 Translation initiation factor aIF-2, bacterial-like CH48_1154 IPR015760 Translation initiation factor IF- 2 CH48_1154 IPR023115 Translation initiation factor IF- 2, domain 3 CH48_1154 IPR009061 Putative DNA-binding domain superfamily CH48_1154 IPR036925 Translation initiation factor IF-2, domain 3 superfamily CH48_1154 IPR009000 Translation protein, beta-barrel domain superfamily CH48_1155 IPR010213 Transcription termination factor NusA CH48_1155 IPR036555 NusA, N-terminal domain superfamily CH48_1155 IPR030842 Transcription termination/antitermination protein NusA, bacterial CH48_1155 IPR013735 Transcription factor NusA, N-terminal CH48_1155 IPR003029 S1 domain CH48_1155 IPR012340 Nucleic acid-binding, OB-fold CH48_1155 IPR009019 K homology domain superfamily, prokaryotic type CH48_1155 IPR022967 RNA-binding domain, S1 CH48_1155 IPR015946 K homology domain-like, alpha/beta CH48_1155 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical CH48_1155 IPR010214 Transcription termination factor NusA, C-terminal duplication CH48_1155 IPR025249 KH domain, NusA-like CH48_1156 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily CH48_1156 IPR028998 Ribosome maturation factor RimP, C-terminal CH48_1156 IPR003728 Ribosome maturation factor RimP CH48_1156 IPR035956 RimP, N-terminal domain superfamily CH48_1156 IPR028989 Ribosome maturation factor RimP, N-terminal CH48_1159 IPR004692 Preprotein translocase SecG subunit CH48_116 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CH48_116 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CH48_116 IPR015424 Pyridoxal phosphate-dependent transferase CH48_116 IPR022278 Phosphoserine aminotransferase CH48_116 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CH48_116 IPR000192 Aminotransferase class V domain CH48_1160 IPR006352 Phosphoglucosamine mutase, bacterial type CH48_1160 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II CH48_1160 IPR005843 Alpha-D-phosphohexomutase, C-terminal CH48_1160 IPR005841 Alpha-D-phosphohexomutase superfamily CH48_1160 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III CH48_1160 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I CH48_1160 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily CH48_1160 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III CH48_1160 IPR016066 Alpha-D-phosphohexomutase, conserved site CH48_1161 IPR006390 Dihydropteroate synthase CH48_1161 IPR011005 Dihydropteroate synthase-like CH48_1161 IPR000489 Pterin-binding domain CH48_1162 IPR003960 ATPase, AAA-type, conserved site CH48_1162 IPR005936 Peptidase, FtsH CH48_1162 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1162 IPR011546 Peptidase M41, FtsH extracellular CH48_1162 IPR003593 AAA+ ATPase domain CH48_1162 IPR000642 Peptidase M41 CH48_1162 IPR041569 AAA ATPase, AAA+ lid domain CH48_1162 IPR037219 Peptidase M41-like CH48_1162 IPR003959 ATPase, AAA-type, core CH48_1163 IPR015507 Ribosomal RNA large subunit methyltransferase E CH48_1163 IPR004512 Ribosomal RNA methyltransferase E, gammaproteobacteria CH48_1163 IPR002877 Ribosomal RNA methyltransferase FtsJ domain CH48_1163 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH48_1164 IPR001890 RNA-binding, CRM domain CH48_1164 IPR017924 RNA-binding protein YhbY CH48_1164 IPR035920 YhbY-like superfamily CH48_1165 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily CH48_1165 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal CH48_1165 IPR028624 Transcription elongation factor GreA/GreB CH48_1165 IPR006359 Transcription elongation factor GreA CH48_1165 IPR018151 Transcription elongation factor, GreA/GreB, conserved site CH48_1165 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily CH48_1165 IPR023459 Transcription elongation factor GreA/GreB family CH48_1165 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal CH48_1166 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C CH48_1166 IPR012338 Beta-lactamase/transpeptidase-like CH48_1167 IPR039420 Transcriptional regulatory protein WalR-like CH48_1167 IPR011006 CheY-like superfamily CH48_1167 IPR001789 Signal transduction response regulator, receiver domain CH48_1167 IPR001867 OmpR/PhoB-type DNA-binding domain CH48_1167 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_1168 IPR003660 HAMP domain CH48_1168 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH48_1168 IPR003594 Histidine kinase/HSP90-like ATPase CH48_1168 IPR005467 Histidine kinase domain CH48_1168 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CH48_1168 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CH48_1168 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CH48_1169 IPR035101 GTP-binding protein, Obg-type CH48_1169 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1169 IPR006169 GTP1/OBG domain CH48_1169 IPR006074 GTP1/OBG, conserved site CH48_1169 IPR014100 GTP-binding protein Obg/CgtA CH48_1169 IPR036726 GTP1/OBG domain superfamily CH48_1169 IPR006073 GTP binding domain CH48_1169 IPR031167 OBG-type guanine nucleotide-binding (G) domain CH48_117 IPR007353 Protein of unknown function DUF421 CH48_117 IPR023090 UPF0702, alpha/beta domain superfamily CH48_1170 IPR000620 EamA domain CH48_1171 IPR001684 Ribosomal protein L27 CH48_1171 IPR018261 Ribosomal protein L27, conserved site CH48_1172 IPR001787 Ribosomal protein L21 CH48_1172 IPR018258 Ribosomal protein L21, conserved site CH48_1172 IPR036164 L21-like superfamily CH48_1172 IPR028909 Ribosomal protein L21-like CH48_1173 IPR008949 Isoprenoid synthase domain superfamily CH48_1173 IPR000092 Polyprenyl synthetase CH48_1173 IPR033749 Polyprenyl synthetase, conserved site CH48_1175 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CH48_1175 IPR038722 Ner, winged helix-turn-helix DNA-binding domain CH48_1176 IPR010097 Malate dehydrogenase, type 1 CH48_1176 IPR001252 Malate dehydrogenase, active site CH48_1176 IPR022383 Lactate/malate dehydrogenase, C-terminal CH48_1176 IPR036291 NAD(P)-binding domain superfamily CH48_1176 IPR001236 Lactate/malate dehydrogenase, N-terminal CH48_1176 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal CH48_1176 IPR023958 Malate dehydrogenase, type 1, bacterial CH48_1176 IPR001557 L-lactate/malate dehydrogenase CH48_1177 IPR020899 Arginine repressor, C-terminal CH48_1177 IPR036251 Arginine repressor, C-terminal domain superfamily CH48_1177 IPR020900 Arginine repressor, DNA-binding domain CH48_1177 IPR001669 Arginine repressor CH48_1177 IPR036390 Winged helix DNA-binding domain superfamily CH48_1177 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_1179 IPR005757 Murein peptide ligase CH48_1179 IPR036565 Mur-like, catalytic domain superfamily CH48_1179 IPR004101 Mur ligase, C-terminal CH48_1179 IPR036615 Mur ligase, C-terminal domain superfamily CH48_1179 IPR013221 Mur ligase, central CH48_1179 IPR000713 Mur ligase, N-terminal catalytic domain CH48_118 IPR027475 Asparaginase/glutaminase, active site 2 CH48_118 IPR020827 Asparaginase/glutaminase, active site 1 CH48_118 IPR027474 L-asparaginase, N-terminal CH48_118 IPR006034 Asparaginase/glutaminase-like CH48_118 IPR036152 Asparaginase/glutaminase-like superfamily CH48_118 IPR037152 L-asparaginase, N-terminal domain superfamily CH48_118 IPR004550 L-asparaginase, type II CH48_118 IPR040919 Asparaginase/glutaminase, C-terminal CH48_118 IPR027473 L-asparaginase, C-terminal CH48_1182 IPR036565 Mur-like, catalytic domain superfamily CH48_1182 IPR013221 Mur ligase, central CH48_1182 IPR004101 Mur ligase, C-terminal CH48_1182 IPR005757 Murein peptide ligase CH48_1182 IPR036615 Mur ligase, C-terminal domain superfamily CH48_1182 IPR000713 Mur ligase, N-terminal catalytic domain CH48_1183 IPR028343 Fructose-1,6-bisphosphatase CH48_1183 IPR020548 Fructose-1,6-bisphosphatase, active site CH48_1183 IPR000146 Fructose-1,6-bisphosphatase class 1 CH48_1183 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal CH48_1184 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding CH48_1184 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CH48_1184 IPR003660 HAMP domain CH48_1184 IPR004090 Chemotaxis methyl-accepting receptor CH48_1184 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily CH48_1184 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CH48_1185 IPR036649 Inorganic pyrophosphatase superfamily CH48_1185 IPR008162 Inorganic pyrophosphatase CH48_1188 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like CH48_1188 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily CH48_1188 IPR013024 Gamma-glutamyl cyclotransferase-like CH48_1188 IPR039126 Gamma-glutamylaminecyclotransferase CH48_119 IPR003776 YcaO-like domain CH48_119 IPR041080 YcaO cyclodehydratase, C-terminal CH48_1190 IPR007452 Translocation and assembly module TamB CH48_1191 IPR035243 TamA, POTRA domain 1 CH48_1191 IPR039910 Surface antigen D15-like CH48_1191 IPR034746 POTRA domain CH48_1191 IPR000184 Bacterial surface antigen (D15) CH48_1191 IPR010827 POTRA domain, BamA/TamA-like CH48_1192 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily CH48_1192 IPR002569 Peptide methionine sulphoxide reductase MsrA CH48_1193 IPR016169 FAD-binding, type PCMH, subdomain 2 CH48_1193 IPR005170 Transporter-associated domain CH48_1193 IPR002550 CNNM, transmembrane domain CH48_1193 IPR000644 CBS domain CH48_1193 IPR036318 FAD-binding, type PCMH-like superfamily CH48_1194 IPR009491 Protein of unknown function DUF1107 CH48_1195 IPR006513 Conserved hypothetical protein CHP01626, YtfJ CH48_1196 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ CH48_1196 IPR020583 Inositol monophosphatase, metal-binding site CH48_1196 IPR000760 Inositol monophosphatase-like CH48_1196 IPR020550 Inositol monophosphatase, conserved site CH48_1197 IPR036907 5'-Nucleotidase, C-terminal domain superfamily CH48_1197 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CH48_1197 IPR006146 5'-Nucleotidase, conserved site CH48_1197 IPR041827 CpdB, N-terminal metallophosphatase domain CH48_1197 IPR006179 5'-Nucleotidase/apyrase CH48_1197 IPR029052 Metallo-dependent phosphatase-like CH48_1197 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase CH48_1197 IPR008334 5'-Nucleotidase, C-terminal CH48_1198 IPR012312 Haemerythrin-like CH48_1198 IPR019903 Repair of iron centres family CH48_1198 IPR023742 Iron-sulfur cluster repair protein YftE CH48_1199 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CH48_1199 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal CH48_1199 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily CH48_12 IPR012340 Nucleic acid-binding, OB-fold CH48_12 IPR021968 Polyribonucleotide phosphorylase C-terminal CH48_12 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G CH48_12 IPR028878 Ribonuclease E CH48_12 IPR004659 Ribonuclease E/G CH48_12 IPR003029 S1 domain CH48_12 IPR022967 RNA-binding domain, S1 CH48_120 IPR023999 Formate transporter FocA, putative CH48_120 IPR000292 Formate/nitrite transporter CH48_120 IPR023271 Aquaporin-like CH48_120 IPR024002 Formate/nitrite transporter, conserved site CH48_1200 IPR013731 Opacity-associated protein A, N-terminal CH48_1200 IPR007340 Opacity-associated protein A CH48_1202 IPR036791 Ribosomal protein L9, C-terminal domain superfamily CH48_1202 IPR020070 Ribosomal protein L9, N-terminal CH48_1202 IPR000244 Ribosomal protein L9 CH48_1202 IPR036935 Ribosomal protein L9, N-terminal domain superfamily CH48_1202 IPR020069 Ribosomal protein L9, C-terminal CH48_1202 IPR020594 Ribosomal protein L9, bacteria/chloroplast CH48_1202 IPR009027 Ribosomal protein L9/RNase H1, N-terminal CH48_1203 IPR036870 Ribosomal protein S18 superfamily CH48_1203 IPR018275 Ribosomal protein S18, conserved site CH48_1203 IPR001648 Ribosomal protein S18 CH48_1204 IPR020814 Ribosomal protein S6, plastid/chloroplast CH48_1204 IPR035980 Ribosomal protein S6 superfamily CH48_1204 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 CH48_1204 IPR000529 Ribosomal protein S6 CH48_1204 IPR020815 Ribosomal protein S6, conserved site CH48_1206 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain CH48_1206 IPR029058 Alpha/Beta hydrolase fold CH48_1207 IPR025543 Dodecin-like CH48_1207 IPR010854 Domain of unknown function DUF1471 CH48_1207 IPR036275 YdgH-like superfamily CH48_1208 IPR006089 Acyl-CoA dehydrogenase, conserved site CH48_1208 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CH48_1208 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CH48_1208 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CH48_1208 IPR034184 Putative acyl-CoA dehydrogenase AidB CH48_1208 IPR041504 Adaptive response protein AidB, N-terminal CH48_1208 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CH48_1209 IPR029064 50S ribosomal protein L30e-like CH48_1209 IPR004441 RNA methyltransferase TrmH family CH48_1209 IPR029028 Alpha/beta knot methyltransferases CH48_1209 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB CH48_1209 IPR013123 RNA 2-O ribose methyltransferase, substrate binding CH48_1209 IPR001537 tRNA/rRNA methyltransferase, SpoU type CH48_1209 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CH48_121 IPR001150 Glycine radical domain CH48_121 IPR004184 Pyruvate formate lyase domain CH48_121 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CH48_121 IPR005949 Formate acetyltransferase CH48_1210 IPR003029 S1 domain CH48_1210 IPR022967 RNA-binding domain, S1 CH48_1210 IPR011805 Ribonuclease R CH48_1210 IPR004476 Ribonuclease II/ribonuclease R CH48_1210 IPR001900 Ribonuclease II/R CH48_1210 IPR022966 Ribonuclease II/R, conserved site CH48_1210 IPR013668 Ribonuclease R winged-helix domain CH48_1210 IPR012340 Nucleic acid-binding, OB-fold CH48_1210 IPR040476 RNase II/RNase R, cold shock domain CH48_1210 IPR011129 Cold shock domain CH48_1210 IPR013223 Ribonuclease B, N-terminal OB domain CH48_1211 IPR030489 Transcription regulator Rrf2-type, conserved site CH48_1211 IPR000944 Transcription regulator Rrf2-type CH48_1211 IPR023761 Transcriptional repressor HTH, NsrR CH48_1211 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_1211 IPR036390 Winged helix DNA-binding domain superfamily CH48_1212 IPR001114 Adenylosuccinate synthetase CH48_1212 IPR042111 Adenylosuccinate synthetase, domain 3 CH48_1212 IPR042110 Adenylosuccinate synthetase, domain 2 CH48_1212 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1212 IPR018220 Adenylosuccinate synthase, GTP-binding site CH48_1212 IPR033128 Adenylosuccinate synthase, active site CH48_1212 IPR042109 Adenylosuccinate synthetase, domain 1 CH48_1213 IPR019201 Protein of unknown function DUF2065 CH48_1214 IPR010200 HflC CH48_1214 IPR001107 Band 7 domain CH48_1214 IPR036013 Band 7/SPFH domain superfamily CH48_1215 IPR001107 Band 7 domain CH48_1215 IPR001972 Stomatin family CH48_1215 IPR020980 Menbrane protein HflK, N-terminal CH48_1215 IPR010201 HflK CH48_1215 IPR036013 Band 7/SPFH domain superfamily CH48_1216 IPR042108 GTPase HflX, N-terminal domain superfamily CH48_1216 IPR006073 GTP binding domain CH48_1216 IPR025121 GTPase HflX, N-terminal CH48_1216 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1216 IPR016496 GTPase HflX CH48_1216 IPR032305 GTP-binding protein, middle domain CH48_1216 IPR035647 EF-G domain III/V-like CH48_1216 IPR030394 HflX-type guanine nucleotide-binding (G) domain CH48_1217 IPR010920 LSM domain superfamily CH48_1217 IPR005001 RNA-binding protein Hfq CH48_1218 IPR018022 IPP transferase CH48_1218 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1218 IPR039657 Dimethylallyltransferase CH48_1219 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CH48_1219 IPR020568 Ribosomal protein S5 domain 2-type fold CH48_1219 IPR042120 MutL, C-terminal domain, dimerisation subdomain CH48_1219 IPR020667 DNA mismatch repair protein, MutL CH48_1219 IPR042121 MutL, C-terminal domain, regulatory subdomain CH48_1219 IPR014790 MutL, C-terminal, dimerisation CH48_1219 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms CH48_1219 IPR014762 DNA mismatch repair, conserved site CH48_1219 IPR037198 MutL, C-terminal domain superfamily CH48_1219 IPR013507 DNA mismatch repair protein, S5 domain 2-like CH48_1219 IPR002099 DNA mismatch repair protein family, N-terminal CH48_1219 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH48_122 IPR007197 Radical SAM CH48_122 IPR001989 Radical-activating enzyme, conserved site CH48_122 IPR013785 Aldolase-type TIM barrel CH48_122 IPR034465 Pyruvate formate-lyase activase CH48_122 IPR034457 Organic radical-activating enzymes CH48_122 IPR012839 Organic radical enzyme activase CH48_122 IPR012838 Pyruvate formate-lyase 1 activating enzyme CH48_1220 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain CH48_1221 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE CH48_1221 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1222 IPR036652 YjeF N-terminal domain superfamily CH48_1222 IPR017953 Carbohydrate kinase, predicted, conserved site CH48_1222 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase CH48_1222 IPR004443 YjeF N-terminal domain CH48_1222 IPR029056 Ribokinase-like CH48_1222 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr CH48_1223 IPR004453 Epoxyqueuosine reductase QueG CH48_1223 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CH48_1223 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CH48_1223 IPR013542 Domain of unknown function DUF1730 CH48_1223 IPR009051 Alpha-helical ferredoxin CH48_1226 IPR013520 Exonuclease, RNase T/DNA polymerase III CH48_1226 IPR022894 Oligoribonuclease CH48_1226 IPR036397 Ribonuclease H superfamily CH48_1226 IPR012337 Ribonuclease H-like superfamily CH48_1227 IPR010914 RsgA GTPase domain CH48_1227 IPR004881 Ribosome biogenesis GTPase RsgA CH48_1227 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain CH48_1227 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1228 IPR033177 Phosphatidylserine decarboxylase CH48_1228 IPR003817 Phosphatidylserine decarboxylase-related CH48_1228 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 CH48_1229 IPR006685 Mechanosensitive ion channel MscS CH48_1229 IPR023408 Mechanosensitive ion channel MscS domain superfamily CH48_1229 IPR024393 Mechanosensitive ion channel MscS, porin domain CH48_1229 IPR011066 Mechanosensitive ion channel MscS, C-terminal CH48_1229 IPR025692 Mechanosensitive ion channel inner membrane domain 1 CH48_1229 IPR006686 Mechanosensitive ion channel MscS, conserved site CH48_1229 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 CH48_1229 IPR010920 LSM domain superfamily CH48_123 IPR023745 MSF-type transporter, YcaD CH48_123 IPR036259 MFS transporter superfamily CH48_123 IPR020846 Major facilitator superfamily domain CH48_123 IPR011701 Major facilitator superfamily CH48_1230 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal CH48_1230 IPR006195 Aminoacyl-tRNA synthetase, class II CH48_1230 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) CH48_1230 IPR004525 Elongation factor P--(R)-beta-lysine ligase CH48_1231 IPR036188 FAD/NAD(P)-binding domain superfamily CH48_1231 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain CH48_1231 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site CH48_1231 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily CH48_1231 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily CH48_1231 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal CH48_1231 IPR005884 Fumarate reductase, flavoprotein subunit CH48_1231 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit CH48_1232 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CH48_1232 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CH48_1232 IPR036010 2Fe-2S ferredoxin-like superfamily CH48_1232 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CH48_1232 IPR012675 Beta-grasp domain superfamily CH48_1232 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein CH48_1232 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CH48_1232 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal CH48_1232 IPR009051 Alpha-helical ferredoxin CH48_1233 IPR003510 Fumarate reductase, subunit C CH48_1233 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit CH48_1234 IPR003418 Fumarate reductase, subunit D CH48_1234 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit CH48_1235 IPR000566 Lipocalin/cytosolic fatty-acid binding domain CH48_1235 IPR002446 Lipocalin, bacterial CH48_1235 IPR022271 Lipocalin, ApoD type CH48_1235 IPR012674 Calycin CH48_1235 IPR022272 Lipocalin family conserved site CH48_1236 IPR000390 Small multidrug resistance protein family CH48_1237 IPR012556 Entericidin A/B CH48_1238 IPR011768 Translation elongation factor P CH48_1238 IPR015365 Elongation factor P, C-terminal CH48_1238 IPR008991 Translation protein SH3-like domain superfamily CH48_1238 IPR013852 Translation elongation factor P/YeiP, conserved site CH48_1238 IPR013185 Translation elongation factor, KOW-like CH48_1238 IPR020599 Translation elongation factor P/YeiP CH48_1238 IPR001059 Translation elongation factor P/YeiP, central CH48_1238 IPR014722 Ribosomal protein L2, domain 2 CH48_1238 IPR012340 Nucleic acid-binding, OB-fold CH48_1239 IPR022462 Lysine-2,3-aminomutase-like CH48_1239 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase CH48_1239 IPR013785 Aldolase-type TIM barrel CH48_1239 IPR007197 Radical SAM CH48_1240 IPR025294 Protein of unknown function DUF4156 CH48_1241 IPR027413 GroEL-like equatorial domain superfamily CH48_1241 IPR001844 Chaperonin Cpn60 CH48_1241 IPR027410 TCP-1-like chaperonin intermediate domain superfamily CH48_1241 IPR002423 Chaperonin Cpn60/TCP-1 family CH48_1241 IPR027409 GroEL-like apical domain superfamily CH48_1241 IPR018370 Chaperonin Cpn60, conserved site CH48_1242 IPR020818 GroES chaperonin family CH48_1242 IPR037124 GroES chaperonin superfamily CH48_1242 IPR011032 GroES-like superfamily CH48_1242 IPR018369 Chaperonin GroES, conserved site CH48_1243 IPR007313 FxsA cytoplasmic membrane protein CH48_1244 IPR020557 Fumarate lyase, conserved site CH48_1244 IPR018951 Fumarase C, C-terminal CH48_1244 IPR024083 Fumarase/histidase, N-terminal CH48_1244 IPR000362 Fumarate lyase family CH48_1244 IPR004708 Aspartate ammonia-lyase CH48_1244 IPR022761 Fumarate lyase, N-terminal CH48_1244 IPR008948 L-Aspartase-like CH48_1245 IPR004668 Anaerobic c4-dicarboxylate membrane transporter CH48_1246 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CH48_1246 IPR004323 Divalent ion tolerance protein, CutA CH48_1246 IPR011322 Nitrogen regulatory PII-like, alpha/beta CH48_1246 IPR023700 Divalent cation tolerance protein CutA, Enterobacteria CH48_1247 IPR013766 Thioredoxin domain CH48_1247 IPR036249 Thioredoxin-like superfamily CH48_1247 IPR017937 Thioredoxin, conserved site CH48_1247 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CH48_1247 IPR035671 DsbD gamma CH48_1247 IPR003834 Cytochrome C biogenesis protein, transmembrane domain CH48_1247 IPR022910 Thiol:disulphide interchange protein DsbD CH48_1247 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily CH48_1248 IPR036129 Glycerate kinase superfamily CH48_1248 IPR018197 Glycerate kinase, restriction-enzyme-like fold CH48_1248 IPR004381 Glycerate kinase CH48_1248 IPR018193 Glycerate kinase, flavodoxin-like fold CH48_1249 IPR009057 Homeobox-like domain superfamily CH48_1249 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CH48_1249 IPR001647 DNA-binding HTH domain, TetR-type CH48_125 IPR015866 Serine-tRNA synthetase, type1, N-terminal CH48_125 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm CH48_125 IPR033729 Serine-tRNA ligase catalytic core domain CH48_125 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) CH48_125 IPR006195 Aminoacyl-tRNA synthetase, class II CH48_125 IPR002317 Serine-tRNA ligase, type1 CH48_125 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily CH48_1251 IPR001150 Glycine radical domain CH48_1251 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CH48_1251 IPR005949 Formate acetyltransferase CH48_1251 IPR004184 Pyruvate formate lyase domain CH48_1252 IPR004372 Acetate/propionate kinase CH48_1252 IPR023865 Aliphatic acid kinase, short-chain, conserved site CH48_1252 IPR024917 Propionate kinase CH48_1252 IPR000890 Aliphatic acid kinase, short-chain CH48_1253 IPR023726 Threonine/serine transporter TdcC CH48_1253 IPR004694 Hydroxy amino acid transporter CH48_1253 IPR013057 Amino acid transporter, transmembrane domain CH48_1254 IPR001926 Pyridoxal-phosphate dependent enzyme CH48_1254 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site CH48_1254 IPR005789 Threonine dehydratase, catabolic CH48_1254 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CH48_1255 IPR026332 Anaerobilin synthase HutW CH48_1255 IPR034505 Anaerobic coproporphyrinogen-III oxidase CH48_1255 IPR006638 Elp3/MiaB/NifB CH48_1255 IPR007197 Radical SAM CH48_1255 IPR023404 Radical SAM, alpha/beta horseshoe CH48_1256 IPR010413 Intracellular heme transport protein HutX-like CH48_1258 IPR019600 Hemin uptake protein HemP CH48_1259 IPR010916 TonB box, conserved site CH48_1259 IPR000531 TonB-dependent receptor-like, beta-barrel CH48_1259 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor CH48_1259 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CH48_1259 IPR037066 TonB-dependent receptor, plug domain superfamily CH48_1259 IPR012910 TonB-dependent receptor, plug domain CH48_1259 IPR039426 Vitamin B12 transporter BtuB-like CH48_1259 IPR011276 TonB-dependent haem/haemoglobin receptor CH48_126 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_126 IPR021886 MgsA AAA+ ATPase C-terminal CH48_126 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal CH48_126 IPR003959 ATPase, AAA-type, core CH48_126 IPR032423 AAA C-terminal domain CH48_126 IPR003593 AAA+ ATPase domain CH48_1260 IPR007845 Haemin-degrading HemS/ChuX domain CH48_1261 IPR002491 ABC transporter periplasmic binding domain CH48_1262 IPR000522 ABC transporter, permease protein, BtuC-like CH48_1262 IPR037294 ABC transporter, BtuC-like CH48_1263 IPR003593 AAA+ ATPase domain CH48_1263 IPR017871 ABC transporter, conserved site CH48_1263 IPR015863 ABC transporter, hemin import, HmuV CH48_1263 IPR003439 ABC transporter-like CH48_1263 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1264 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CH48_1264 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CH48_1264 IPR000524 Transcription regulator HTH, GntR CH48_1264 IPR036390 Winged helix DNA-binding domain superfamily CH48_1264 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_1264 IPR004839 Aminotransferase, class I/classII CH48_1264 IPR015424 Pyridoxal phosphate-dependent transferase CH48_1266 IPR010917 TonB-dependent receptor, conserved site CH48_1266 IPR039423 TonB-dependent receptor-like CH48_1266 IPR000531 TonB-dependent receptor-like, beta-barrel CH48_1266 IPR010105 TonB-dependent siderophore receptor CH48_1266 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CH48_1266 IPR012910 TonB-dependent receptor, plug domain CH48_1266 IPR037066 TonB-dependent receptor, plug domain superfamily CH48_1267 IPR024393 Mechanosensitive ion channel MscS, porin domain CH48_1267 IPR010920 LSM domain superfamily CH48_1267 IPR025692 Mechanosensitive ion channel inner membrane domain 1 CH48_1267 IPR006685 Mechanosensitive ion channel MscS CH48_1267 IPR011066 Mechanosensitive ion channel MscS, C-terminal CH48_1267 IPR006686 Mechanosensitive ion channel MscS, conserved site CH48_1267 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 CH48_1267 IPR023408 Mechanosensitive ion channel MscS domain superfamily CH48_1268 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM CH48_1268 IPR036165 YefM-like superfamily CH48_1269 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like CH48_1269 IPR001431 Peptidase M16, zinc-binding site CH48_1269 IPR007863 Peptidase M16, C-terminal CH48_1269 IPR011765 Peptidase M16, N-terminal CH48_127 IPR029046 Lipoprotein localisation LolA/LolB/LppX CH48_127 IPR004564 Outer membrane lipoprotein carrier protein LolA-like CH48_127 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria CH48_1270 IPR017871 ABC transporter, conserved site CH48_1270 IPR003593 AAA+ ATPase domain CH48_1270 IPR011527 ABC transporter type 1, transmembrane domain CH48_1270 IPR036640 ABC transporter type 1, transmembrane domain superfamily CH48_1270 IPR003439 ABC transporter-like CH48_1270 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1271 IPR012910 TonB-dependent receptor, plug domain CH48_1271 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CH48_1271 IPR037066 TonB-dependent receptor, plug domain superfamily CH48_1272 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component CH48_1272 IPR032623 FecR, N-terminal CH48_1272 IPR006860 FecR protein CH48_1275 IPR001455 TusA-like domain CH48_1275 IPR036868 TusA-like domain superfamily CH48_1276 IPR007272 Sulphur transport domain CH48_1277 IPR006135 Type III secretion system substrate exporter CH48_1277 IPR006307 Type III exporter system, secretion apparatus protein BsaZ CH48_1277 IPR029025 Type III secretion system substrate exporter, C-terminal CH48_1278 IPR006304 Type III secretion protein SpaR/YscT CH48_1278 IPR002010 Type III secretion system inner membrane R protein CH48_1279 IPR006306 Type III secretion protein HrpO CH48_1279 IPR002191 Bacterial export protein family 3 CH48_128 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_128 IPR018541 FtsK gamma domain CH48_128 IPR041027 FtsK alpha domain CH48_128 IPR002543 FtsK domain CH48_128 IPR025199 DNA translocase FtsK, 4TM region CH48_128 IPR036390 Winged helix DNA-binding domain superfamily CH48_128 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_1280 IPR005838 Type III secretion system inner membrane P protein CH48_1280 IPR005773 Yop virulence translocation protein R CH48_1281 IPR001543 Surface presentation of antigen (SpoA) CH48_1281 IPR036429 SpoA-like superfamily CH48_1281 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb CH48_1281 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO CH48_1284 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CH48_1284 IPR040627 T3SS EscN ATPase, C-terminal CH48_1284 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1284 IPR003593 AAA+ ATPase domain CH48_1284 IPR013380 ATPase, type III secretion system, H+-transporting CH48_1284 IPR005714 ATPase, type III secretion system, FliI/YscN CH48_1285 IPR001712 Type III secretion system FHIPEP CH48_1285 IPR006302 Type III secretion protein HrcV CH48_1285 IPR042193 FHIPEP, domain 3 CH48_1285 IPR042196 FHIPEP, domain 4 CH48_1285 IPR025505 FHIPEP conserved site CH48_1286 IPR017033 Type III secretion system apparatus protein SsaM CH48_1287 IPR013351 Type III secretion system effector delivery regulator TyeA-related CH48_1287 IPR010812 Hypersensitivity response secretion-like, HrpJ CH48_129 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_129 IPR011991 ArsR-like helix-turn-helix domain CH48_129 IPR000485 AsnC-type HTH domain CH48_129 IPR011008 Dimeric alpha-beta barrel CH48_129 IPR019888 Transcription regulator AsnC-type CH48_129 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CH48_129 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CH48_129 IPR036390 Winged helix DNA-binding domain superfamily CH48_1290 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ CH48_1290 IPR006182 Secretory protein YscJ/FliF CH48_1294 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like CH48_1294 IPR009057 Homeobox-like domain superfamily CH48_1294 IPR018060 DNA binding HTH domain, AraC-type CH48_1294 IPR018062 HTH domain AraC-type, conserved site CH48_1299 IPR006972 Secretion system effector C, SseC-like CH48_13 IPR011008 Dimeric alpha-beta barrel CH48_13 IPR007138 Antibiotic biosynthesis monooxygenase domain CH48_1308 IPR003594 Histidine kinase/HSP90-like ATPase CH48_1308 IPR005467 Histidine kinase domain CH48_1308 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CH48_1308 IPR036641 HPT domain superfamily CH48_1308 IPR011006 CheY-like superfamily CH48_1308 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH48_1308 IPR003660 HAMP domain CH48_1308 IPR019247 Histidine kinase BarA, N-terminal CH48_1308 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CH48_1308 IPR001789 Signal transduction response regulator, receiver domain CH48_1308 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CH48_1308 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CH48_1309 IPR000792 Transcription regulator LuxR, C-terminal CH48_1309 IPR001789 Signal transduction response regulator, receiver domain CH48_1309 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_1309 IPR011006 CheY-like superfamily CH48_1309 IPR016032 Signal transduction response regulator, C-terminal effector CH48_131 IPR023753 FAD/NAD(P)-binding domain CH48_131 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site CH48_131 IPR005982 Thioredoxin reductase CH48_131 IPR036188 FAD/NAD(P)-binding domain superfamily CH48_1310 IPR034703 Proton/glutamate-aspartate symporter GltP CH48_1310 IPR036458 Sodium:dicarboxylate symporter superfamily CH48_1310 IPR033380 Glutamate-aspartate symport protein GltP/GltT CH48_1310 IPR001991 Sodium:dicarboxylate symporter CH48_1310 IPR018107 Sodium:dicarboxylate symporter, conserved site CH48_1311 IPR000873 AMP-dependent synthetase/ligase CH48_1311 IPR011904 Acetate-CoA ligase CH48_1311 IPR042099 AMP-dependent synthetase-like superfamily CH48_1311 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain CH48_1311 IPR020845 AMP-binding, conserved site CH48_1311 IPR025110 AMP-binding enzyme, C-terminal domain CH48_1312 IPR007436 Protein of unknown function DUF485 CH48_1313 IPR014083 Cation/acetate symporter ActP CH48_1313 IPR018212 Sodium/solute symporter, conserved site CH48_1313 IPR038377 Sodium/glucose symporter superfamily CH48_1313 IPR001734 Sodium/solute symporter CH48_132 IPR039421 Type I protein exporter CH48_132 IPR011527 ABC transporter type 1, transmembrane domain CH48_132 IPR036640 ABC transporter type 1, transmembrane domain superfamily CH48_132 IPR003439 ABC transporter-like CH48_132 IPR017871 ABC transporter, conserved site CH48_132 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_132 IPR003593 AAA+ ATPase domain CH48_132 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD CH48_1323 IPR001451 Hexapeptide repeat CH48_1323 IPR011004 Trimeric LpxA-like superfamily CH48_1324 IPR011342 Shikimate dehydrogenase CH48_1324 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CH48_1324 IPR022893 Shikimate dehydrogenase family CH48_1324 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal CH48_1324 IPR041121 SDH, C-terminal CH48_1324 IPR036291 NAD(P)-binding domain superfamily CH48_1325 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily CH48_1325 IPR023535 Threonylcarbamoyl-AMP synthase CH48_1325 IPR006070 YrdC-like domain CH48_1326 IPR000380 DNA topoisomerase, type IA CH48_1326 IPR013498 DNA topoisomerase, type IA, zn finger CH48_1327 IPR007456 Smg CH48_1328 IPR041614 DprA, winged helix domain CH48_1328 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_1328 IPR003488 DNA recombination-mediator protein A CH48_1329 IPR036821 Peptide deformylase superfamily CH48_1329 IPR023635 Peptide deformylase CH48_133 IPR036640 ABC transporter type 1, transmembrane domain superfamily CH48_133 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC CH48_133 IPR003593 AAA+ ATPase domain CH48_133 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_133 IPR011527 ABC transporter type 1, transmembrane domain CH48_133 IPR003439 ABC transporter-like CH48_133 IPR017871 ABC transporter, conserved site CH48_1330 IPR001555 Phosphoribosylglycinamide formyltransferase, active site CH48_1330 IPR005793 Formyl transferase, C-terminal CH48_1330 IPR011034 Formyl transferase-like, C-terminal domain superfamily CH48_1330 IPR036477 Formyl transferase, N-terminal domain superfamily CH48_1330 IPR002376 Formyl transferase, N-terminal CH48_1330 IPR005794 Methionyl-tRNA formyltransferase CH48_1330 IPR037022 Formyl transferase, C-terminal domain superfamily CH48_1330 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain CH48_1331 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site CH48_1331 IPR035926 NusB-like superfamily CH48_1331 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type CH48_1331 IPR023267 RNA (C5-cytosine) methyltransferase CH48_1331 IPR004573 rRNA small subunit methyltransferase B CH48_1331 IPR023541 rRNA small subunit methyltransferase B, enterobacteriaceae CH48_1331 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH48_1331 IPR006027 NusB/RsmB/TIM44 CH48_1332 IPR036291 NAD(P)-binding domain superfamily CH48_1332 IPR003148 Regulator of K+ conductance, N-terminal CH48_1332 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily CH48_1332 IPR006037 Regulator of K+ conductance, C-terminal CH48_1332 IPR006036 Potassium uptake protein TrkA CH48_1333 IPR036019 Gated mechanosensitive channel CH48_1333 IPR001185 Large-conductance mechanosensitive channel CH48_1333 IPR019823 Large-conductance mechanosensitive channel, conserved site CH48_1333 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L CH48_1336 IPR005589 Alternative ribosome-rescue factor A CH48_1337 IPR011788 Zn(II)-responsive transcriptional regulator CH48_1337 IPR000551 MerR-type HTH domain CH48_1337 IPR009061 Putative DNA-binding domain superfamily CH48_1338 IPR018961 DnaJ homologue, subfamily C, member 28, conserved domain CH48_1339 IPR000456 Ribosomal protein L17 CH48_1339 IPR036373 Ribosomal protein L17 superfamily CH48_134 IPR016181 Acyl-CoA N-acyltransferase CH48_134 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase CH48_134 IPR042203 Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal CH48_1340 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type CH48_1340 IPR011262 DNA-directed RNA polymerase, insert domain CH48_1340 IPR011260 RNA polymerase, alpha subunit, C-terminal CH48_1340 IPR011773 DNA-directed RNA polymerase, alpha subunit CH48_1340 IPR036603 RNA polymerase, RBP11-like subunit CH48_1340 IPR036643 DNA-directed RNA polymerase, insert domain superfamily CH48_1341 IPR036986 RNA-binding S4 domain superfamily CH48_1341 IPR018079 Ribosomal protein S4, conserved site CH48_1341 IPR002942 RNA-binding S4 domain CH48_1341 IPR005709 Ribosomal protein S4, bacterial-type CH48_1341 IPR001912 Ribosomal protein S4/S9, N-terminal CH48_1341 IPR022801 Ribosomal protein S4/S9 CH48_1342 IPR018102 Ribosomal S11, conserved site CH48_1342 IPR001971 Ribosomal protein S11 CH48_1342 IPR019981 Ribosomal protein S11, bacterial-type CH48_1342 IPR036967 Ribosomal protein S11 superfamily CH48_1343 IPR027437 30s ribosomal protein S13, C-terminal CH48_1343 IPR001892 Ribosomal protein S13 CH48_1343 IPR019980 Ribosomal protein S13, bacterial-type CH48_1343 IPR010979 Ribosomal protein S13-like, H2TH CH48_1343 IPR018269 Ribosomal protein S13, conserved site CH48_1344 IPR035977 Ribosomal protein L36 superfamily CH48_1344 IPR000473 Ribosomal protein L36 CH48_1345 IPR002208 SecY/SEC61-alpha family CH48_1345 IPR026593 Protein translocase subunit SecY CH48_1345 IPR023201 SecY domain superfamily CH48_1345 IPR030659 SecY conserved site CH48_1346 IPR001196 Ribosomal protein L15, conserved site CH48_1346 IPR005749 Ribosomal protein L15, bacterial-type CH48_1346 IPR036227 Ribosomal L18e/L15P superfamily CH48_1346 IPR030878 Ribosomal protein L15 CH48_1346 IPR021131 Ribosomal protein L18e/L15P CH48_1347 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily CH48_1347 IPR005996 Ribosomal protein L30, bacterial-type CH48_1347 IPR018038 Ribosomal protein L30, conserved site CH48_1347 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain CH48_1348 IPR013810 Ribosomal protein S5, N-terminal CH48_1348 IPR018192 Ribosomal protein S5, N-terminal, conserved site CH48_1348 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CH48_1348 IPR020568 Ribosomal protein S5 domain 2-type fold CH48_1348 IPR005324 Ribosomal protein S5, C-terminal CH48_1348 IPR005712 Ribosomal protein S5, bacterial-type CH48_1348 IPR000851 Ribosomal protein S5 CH48_1349 IPR005484 Ribosomal protein L18 CH48_1349 IPR004389 Ribosomal protein L18, bacterial-type CH48_135 IPR004368 Translation initiation factor IF-1 CH48_135 IPR022967 RNA-binding domain, S1 CH48_135 IPR012340 Nucleic acid-binding, OB-fold CH48_135 IPR006196 RNA-binding domain, S1, IF1 type CH48_1350 IPR019906 Ribosomal protein L6, bacterial-type CH48_1350 IPR000702 Ribosomal protein L6 CH48_1350 IPR020040 Ribosomal protein L6, alpha-beta domain CH48_1350 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily CH48_1350 IPR002358 Ribosomal protein L6, conserved site CH48_1351 IPR035987 Ribosomal protein S8 superfamily CH48_1351 IPR000630 Ribosomal protein S8 CH48_1352 IPR001209 Ribosomal protein S14 CH48_1352 IPR023036 Ribosomal protein S14, bacterial/plastid CH48_1352 IPR018271 Ribosomal protein S14, conserved site CH48_1353 IPR031310 Ribosomal protein L5, N-terminal CH48_1353 IPR031309 Ribosomal protein L5, C-terminal CH48_1353 IPR020930 Ribosomal protein L5, bacterial-type CH48_1353 IPR002132 Ribosomal protein L5 CH48_1353 IPR022803 Ribosomal protein L5 domain superfamily CH48_1354 IPR008991 Translation protein SH3-like domain superfamily CH48_1354 IPR005825 Ribosomal protein L24/L26, conserved site CH48_1354 IPR003256 Ribosomal protein L24 CH48_1354 IPR005824 KOW CH48_1354 IPR014722 Ribosomal protein L2, domain 2 CH48_1354 IPR041988 Ribosomal Protein L26/L24, KOW domain CH48_1355 IPR005745 Ribosomal protein L14P, bacterial-type CH48_1355 IPR000218 Ribosomal protein L14P CH48_1355 IPR036853 Ribosomal protein L14 superfamily CH48_1355 IPR019972 Ribosomal protein L14P, conserved site CH48_1356 IPR019979 Ribosomal protein S17, conserved site CH48_1356 IPR019984 30S ribosomal protein S17 CH48_1356 IPR000266 Ribosomal protein S17/S11 CH48_1356 IPR012340 Nucleic acid-binding, OB-fold CH48_1357 IPR036049 Ribosomal protein L29/L35 superfamily CH48_1357 IPR001854 Ribosomal protein L29/L35 CH48_1358 IPR000114 Ribosomal protein L16 CH48_1358 IPR016180 Ribosomal protein L10e/L16 CH48_1358 IPR036920 Ribosomal protein L10e/L16 superfamily CH48_1358 IPR020798 Ribosomal protein L16, conserved site CH48_1359 IPR009019 K homology domain superfamily, prokaryotic type CH48_1359 IPR005704 Ribosomal protein S3, bacterial-type CH48_1359 IPR001351 Ribosomal protein S3, C-terminal CH48_1359 IPR036419 Ribosomal protein S3, C-terminal domain superfamily CH48_1359 IPR018280 Ribosomal protein S3, conserved site CH48_1359 IPR004044 K Homology domain, type 2 CH48_1359 IPR015946 K homology domain-like, alpha/beta CH48_1359 IPR004087 K Homology domain CH48_136 IPR028299 ClpA/B, conserved site 2 CH48_136 IPR001270 ClpA/B family CH48_136 IPR003959 ATPase, AAA-type, core CH48_136 IPR004176 Clp, N-terminal CH48_136 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA CH48_136 IPR003593 AAA+ ATPase domain CH48_136 IPR018368 ClpA/B, conserved site 1 CH48_136 IPR019489 Clp ATPase, C-terminal CH48_136 IPR036628 Clp, N-terminal domain superfamily CH48_136 IPR041546 ClpA/ClpB, AAA lid domain CH48_136 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1360 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type CH48_1360 IPR036394 Ribosomal protein L22/L17 superfamily CH48_1360 IPR018260 Ribosomal protein L22/L17, conserved site CH48_1360 IPR001063 Ribosomal protein L22/L17 CH48_1361 IPR020934 Ribosomal protein S19 conserved site CH48_1361 IPR023575 Ribosomal protein S19, superfamily CH48_1361 IPR002222 Ribosomal protein S19/S15 CH48_1361 IPR005732 Ribosomal protein S19, bacterial-type CH48_1362 IPR002171 Ribosomal protein L2 CH48_1362 IPR005880 Ribosomal protein L2, bacterial/organellar-type CH48_1362 IPR014722 Ribosomal protein L2, domain 2 CH48_1362 IPR022666 Ribosomal Proteins L2, RNA binding domain CH48_1362 IPR022669 Ribosomal protein L2, C-terminal CH48_1362 IPR012340 Nucleic acid-binding, OB-fold CH48_1362 IPR014726 Ribosomal protein L2, domain 3 CH48_1362 IPR008991 Translation protein SH3-like domain superfamily CH48_1362 IPR022671 Ribosomal protein L2, conserved site CH48_1363 IPR013025 Ribosomal protein L25/L23 CH48_1363 IPR001014 Ribosomal protein L23/L25, conserved site CH48_1363 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily CH48_1363 IPR012678 Ribosomal protein L23/L15e core domain superfamily CH48_1364 IPR023574 Ribosomal protein L4 domain superfamily CH48_1364 IPR002136 Ribosomal protein L4/L1e CH48_1364 IPR013005 50S ribosomal protein uL4 CH48_1365 IPR009000 Translation protein, beta-barrel domain superfamily CH48_1365 IPR019926 Ribosomal protein L3, conserved site CH48_1365 IPR019927 Ribosomal protein L3, bacterial/organelle-type CH48_1365 IPR000597 Ribosomal protein L3 CH48_1366 IPR036838 Ribosomal protein S10 domain superfamily CH48_1366 IPR027486 Ribosomal protein S10 domain CH48_1366 IPR018268 Ribosomal protein S10, conserved site CH48_1366 IPR001848 Ribosomal protein S10 CH48_1367 IPR008331 Ferritin/DPS protein domain CH48_1367 IPR009040 Ferritin-like diiron domain CH48_1367 IPR009078 Ferritin-like superfamily CH48_1367 IPR002024 Bacterioferritin CH48_1367 IPR012347 Ferritin-like CH48_1369 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily CH48_1369 IPR007419 BFD-like [2Fe-2S]-binding domain CH48_137 IPR003769 Adaptor protein ClpS, core CH48_137 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CH48_137 IPR022935 ATP-dependent Clp protease adaptor protein ClpS CH48_1370 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain CH48_1370 IPR004161 Translation elongation factor EFTu-like, domain 2 CH48_1370 IPR033720 Elongation factor Tu, domain 2 CH48_1370 IPR031157 Tr-type G domain, conserved site CH48_1370 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CH48_1370 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle CH48_1370 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CH48_1370 IPR009000 Translation protein, beta-barrel domain superfamily CH48_1370 IPR000795 Transcription factor, GTP-binding domain CH48_1370 IPR005225 Small GTP-binding protein domain CH48_1370 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1371 IPR005517 Translation elongation factor EFG/EF2, domain IV CH48_1371 IPR004540 Translation elongation factor EFG/EF2 CH48_1371 IPR000795 Transcription factor, GTP-binding domain CH48_1371 IPR005225 Small GTP-binding protein domain CH48_1371 IPR009000 Translation protein, beta-barrel domain superfamily CH48_1371 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CH48_1371 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1371 IPR031157 Tr-type G domain, conserved site CH48_1371 IPR004161 Translation elongation factor EFTu-like, domain 2 CH48_1371 IPR000640 Elongation factor EFG, domain V-like CH48_1371 IPR020568 Ribosomal protein S5 domain 2-type fold CH48_1371 IPR035649 EFG, domain V CH48_1371 IPR035647 EF-G domain III/V-like CH48_1371 IPR009022 Elongation factor G, domain III CH48_1371 IPR041095 Elongation Factor G, domain II CH48_1372 IPR020606 Ribosomal protein S7, conserved site CH48_1372 IPR036823 Ribosomal protein S7 domain superfamily CH48_1372 IPR000235 Ribosomal protein S5/S7 CH48_1372 IPR005717 Ribosomal protein S7, bacterial/organellar-type CH48_1372 IPR023798 Ribosomal protein S7 domain CH48_1373 IPR012340 Nucleic acid-binding, OB-fold CH48_1373 IPR005679 Ribosomal protein S12, bacterial-type CH48_1373 IPR006032 Ribosomal protein S12/S23 CH48_1374 IPR023526 Sulphur relay, TusB CH48_1374 IPR027396 DsrEFH-like CH48_1374 IPR007215 Sulphur relay, TusB/DsrH CH48_1375 IPR003787 Sulphur relay, DsrE/F-like protein CH48_1375 IPR037450 Sulphur relay, TusC CH48_1375 IPR017462 Sulphur relay, TusC/DsrF CH48_1375 IPR027396 DsrEFH-like CH48_1376 IPR017463 Sulphur relay, TusD/DsrE CH48_1376 IPR003787 Sulphur relay, DsrE/F-like protein CH48_1376 IPR027396 DsrEFH-like CH48_1377 IPR039446 Transcriptional regulator DauR-like CH48_1377 IPR013559 YheO-like CH48_1377 IPR039445 Transcriptional regulator DauR-like, HTH domain CH48_1378 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily CH48_1378 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CH48_1378 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal CH48_1379 IPR007236 SlyX CH48_1380 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CH48_1381 IPR012658 Conserved hypothetical protein CHP02443 CH48_1382 IPR003148 Regulator of K+ conductance, N-terminal CH48_1382 IPR036291 NAD(P)-binding domain superfamily CH48_1382 IPR004771 K+/H+ exchanger CH48_1382 IPR006153 Cation/H+ exchanger CH48_1382 IPR038770 Sodium/solute symporter superfamily CH48_1382 IPR020884 Glutathione-regulated potassium-efflux system protein KefB CH48_1383 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG CH48_1383 IPR003680 Flavodoxin-like fold CH48_1383 IPR029039 Flavoprotein-like superfamily CH48_1384 IPR032781 ABC-transporter extension domain CH48_1384 IPR003593 AAA+ ATPase domain CH48_1384 IPR003439 ABC transporter-like CH48_1384 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1384 IPR017871 ABC transporter, conserved site CH48_1385 IPR029044 Nucleotide-diphospho-sugar transferases CH48_1385 IPR001173 Glycosyltransferase 2-like CH48_1387 IPR003819 TauD/TfdA-like domain CH48_1387 IPR042098 Taurine dioxygenase TauD-like superfamily CH48_1388 IPR035906 MetI-like superfamily CH48_1388 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CH48_1389 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1389 IPR003593 AAA+ ATPase domain CH48_1389 IPR003439 ABC transporter-like CH48_1389 IPR017871 ABC transporter, conserved site CH48_1389 IPR015859 ABC transporter, taurine import, TauD CH48_139 IPR019844 Cold-shock (CSD) domain CH48_139 IPR002059 Cold-shock protein, DNA-binding CH48_139 IPR012156 Cold shock, CspA CH48_139 IPR012340 Nucleic acid-binding, OB-fold CH48_139 IPR012751 CspD, cold shock CH48_139 IPR011129 Cold shock domain CH48_1390 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CH48_1390 IPR010068 Taurine ABC transporter, substrate-binding protein TauA CH48_1390 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain CH48_1391 IPR003719 Phenazine biosynthesis PhzF protein CH48_1392 IPR001123 Amino acid exporter protein, LeuE-type CH48_1393 IPR000073 Alpha/beta hydrolase fold-1 CH48_1393 IPR029058 Alpha/Beta hydrolase fold CH48_1393 IPR012020 AB hydrolase 4 family CH48_1393 IPR000952 AB hydrolase 4, conserved site CH48_1394 IPR036685 YehU-like superfamily CH48_1394 IPR010648 Uncharacterised protein family UPF0270 CH48_1395 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1395 IPR006083 Phosphoribulokinase/uridine kinase CH48_1395 IPR006082 Phosphoribulokinase CH48_1396 IPR003718 OsmC/Ohr family CH48_1396 IPR015946 K homology domain-like, alpha/beta CH48_1396 IPR036102 OsmC/Ohr superfamily CH48_1397 IPR012318 Crp-type HTH domain CH48_1397 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_1397 IPR036390 Winged helix DNA-binding domain superfamily CH48_1397 IPR000595 Cyclic nucleotide-binding domain CH48_1397 IPR018335 Transcription regulator HTH, Crp-type, conserved site CH48_1397 IPR018490 Cyclic nucleotide-binding-like CH48_1397 IPR018488 Cyclic nucleotide-binding, conserved site CH48_1397 IPR014710 RmlC-like jelly roll fold CH48_1398 IPR032692 Integral membrane protein YccS, N-terminal CH48_1398 IPR010020 Integral membrane protein, YccS/YhfK CH48_1399 IPR004636 Acetylornithine/Succinylornithine transaminase family CH48_1399 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria CH48_1399 IPR015424 Pyridoxal phosphate-dependent transferase CH48_1399 IPR005814 Aminotransferase class-III CH48_1399 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CH48_1399 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CH48_14 IPR004721 Dihydroorotase homodimeric type CH48_14 IPR002195 Dihydroorotase, conserved site CH48_14 IPR032466 Metal-dependent hydrolase CH48_14 IPR006680 Amidohydrolase-related CH48_140 IPR003593 AAA+ ATPase domain CH48_140 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_140 IPR025857 MacB-like periplasmic core domain CH48_140 IPR003838 ABC transporter permease protein domain CH48_140 IPR017911 ABC transporter, macrolide export, ATP-binding domain CH48_140 IPR017871 ABC transporter, conserved site CH48_140 IPR003439 ABC transporter-like CH48_1400 IPR029062 Class I glutamine amidotransferase-like CH48_1400 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain CH48_1400 IPR017926 Glutamine amidotransferase CH48_1401 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1401 IPR033186 Helicase HerA-like C-terminal CH48_1402 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain CH48_1402 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site CH48_1402 IPR029000 Cyclophilin-like domain superfamily CH48_1404 IPR022616 Glycosyl hydrolase, family 4, C-terminal CH48_1404 IPR001088 Glycoside hydrolase, family 4 CH48_1404 IPR019802 Glycoside hydrolase, family 4, conserved site CH48_1404 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal CH48_1404 IPR036291 NAD(P)-binding domain superfamily CH48_1405 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CH48_1405 IPR028082 Periplasmic binding protein-like I CH48_1405 IPR000843 LacI-type HTH domain CH48_1406 IPR011701 Major facilitator superfamily CH48_1406 IPR020846 Major facilitator superfamily domain CH48_1406 IPR036259 MFS transporter superfamily CH48_1406 IPR023528 Major facilitator superfamily transporter, TsgA CH48_1407 IPR011059 Metal-dependent hydrolase, composite domain superfamily CH48_1407 IPR013108 Amidohydrolase 3 CH48_1407 IPR032466 Metal-dependent hydrolase CH48_1408 IPR023753 FAD/NAD(P)-binding domain CH48_1408 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal CH48_1408 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site CH48_1408 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain CH48_1408 IPR007419 BFD-like [2Fe-2S]-binding domain CH48_1408 IPR036188 FAD/NAD(P)-binding domain superfamily CH48_1408 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily CH48_1408 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB CH48_1408 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily CH48_1408 IPR017121 Nitrite reductase [NAD(P)H], large subunit CH48_1408 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain CH48_1409 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily CH48_1409 IPR012748 Rieske-like [2Fe-2S] domain, NirD-type CH48_1409 IPR017881 Nitrite reductase (NADH) small subunit CH48_141 IPR030190 Macrolide export protein MacA CH48_141 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CH48_141 IPR006143 RND efflux pump, membrane fusion protein CH48_1410 IPR023271 Aquaporin-like CH48_1410 IPR000292 Formate/nitrite transporter CH48_1410 IPR024002 Formate/nitrite transporter, conserved site CH48_1411 IPR035996 Tetrapyrrole methylase superfamily CH48_1411 IPR019478 Sirohaem synthase, dimerisation domain CH48_1411 IPR028281 Siroheme synthase, central domain CH48_1411 IPR012409 Sirohaem synthase CH48_1411 IPR006366 Uroporphyrin-III C-methyltransferase CH48_1411 IPR036291 NAD(P)-binding domain superfamily CH48_1411 IPR000878 Tetrapyrrole methylase CH48_1411 IPR014776 Tetrapyrrole methylase, subdomain 2 CH48_1411 IPR006367 Sirohaem synthase, N-terminal CH48_1411 IPR014777 Tetrapyrrole methylase, subdomain 1 CH48_1411 IPR037115 Sirohaem synthase, dimerisation domain superfamily CH48_1411 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site CH48_1412 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CH48_1412 IPR024109 Tryptophan-tRNA ligase, bacterial-type CH48_1412 IPR002306 Tryptophan-tRNA ligase CH48_1412 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH48_1412 IPR002305 Aminoacyl-tRNA synthetase, class Ic CH48_1413 IPR036412 HAD-like superfamily CH48_1413 IPR006439 HAD hydrolase, subfamily IA CH48_1413 IPR041492 Haloacid dehalogenase-like hydrolase CH48_1413 IPR023214 HAD superfamily CH48_1413 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CH48_1413 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic CH48_1413 IPR037512 Phosphoglycolate phosphatase, prokaryotic CH48_1414 IPR026019 Ribulose-phosphate 3-epimerase CH48_1414 IPR013785 Aldolase-type TIM barrel CH48_1414 IPR011060 Ribulose-phosphate binding barrel CH48_1414 IPR000056 Ribulose-phosphate 3-epimerase-like CH48_1415 IPR012263 Adenine modification methylase, M.EcoRV-type CH48_1415 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH48_1415 IPR023095 Adenine-specific methyltransferase, domain 2 CH48_1415 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CH48_1415 IPR012327 D12 class N6 adenine-specific DNA methyltransferase CH48_1416 IPR036680 Sporulation-like domain superfamily CH48_1416 IPR007730 Sporulation-like domain CH48_1417 IPR030960 3-dehydroquinate synthase domain CH48_1417 IPR016037 3-dehydroquinate synthase AroB CH48_1417 IPR030963 3-dehydroquinate synthase family CH48_1418 IPR000623 Shikimate kinase/Threonine synthase-like 1 CH48_1418 IPR031322 Shikimate kinase/gluconokinase CH48_1418 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1418 IPR023000 Shikimate kinase, conserved site CH48_1419 IPR038591 NolW-like superfamily CH48_1419 IPR005644 NolW-like CH48_1419 IPR001775 GspD/PilQ family CH48_1419 IPR004845 Type II secretion system GspD, conserved site CH48_1419 IPR004846 Type II/III secretion system CH48_1419 IPR011662 Secretin/TonB, short N-terminal domain CH48_1419 IPR013355 Type IV pilus secretin PilQ CH48_142 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_142 IPR022602 Protein of unknown function DUF2813 CH48_142 IPR006171 TOPRIM domain CH48_142 IPR034139 OLD protein-like, TOPRIM domain CH48_1424 IPR036950 Penicillin binding protein transglycosylase domain CH48_1424 IPR012338 Beta-lactamase/transpeptidase-like CH48_1424 IPR001264 Glycosyl transferase, family 51 CH48_1424 IPR001460 Penicillin-binding protein, transpeptidase CH48_1424 IPR023346 Lysozyme-like domain superfamily CH48_1424 IPR031376 Penicillin-binding protein, OB-like domain CH48_1425 IPR000086 NUDIX hydrolase domain CH48_1425 IPR020084 NUDIX hydrolase, conserved site CH48_1425 IPR015797 NUDIX hydrolase-like domain superfamily CH48_1426 IPR010771 Intracellular growth attenuator IgaA CH48_1427 IPR036412 HAD-like superfamily CH48_1427 IPR006439 HAD hydrolase, subfamily IA CH48_1427 IPR041492 Haloacid dehalogenase-like hydrolase CH48_1427 IPR023214 HAD superfamily CH48_1428 IPR036986 RNA-binding S4 domain superfamily CH48_1428 IPR025708 Heat shock protein 15 CH48_1428 IPR002942 RNA-binding S4 domain CH48_1429 IPR000397 Heat shock protein Hsp33 CH48_1429 IPR016154 Heat shock protein Hsp33, C-terminal CH48_1429 IPR016153 Heat shock protein Hsp33, N-terminal CH48_1429 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily CH48_143 IPR007488 Protein of unknown function DUF535 CH48_1430 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal CH48_1430 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising CH48_1430 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site CH48_1430 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal CH48_1432 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CH48_1432 IPR003594 Histidine kinase/HSP90-like ATPase CH48_1432 IPR003660 HAMP domain CH48_1432 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH48_1432 IPR005467 Histidine kinase domain CH48_1432 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CH48_1432 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CH48_1433 IPR039420 Transcriptional regulatory protein WalR-like CH48_1433 IPR001789 Signal transduction response regulator, receiver domain CH48_1433 IPR016032 Signal transduction response regulator, C-terminal effector CH48_1433 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_1433 IPR011006 CheY-like superfamily CH48_1433 IPR001867 OmpR/PhoB-type DNA-binding domain CH48_1434 IPR028624 Transcription elongation factor GreA/GreB CH48_1434 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal CH48_1434 IPR006358 Transcription elongation factor GreB CH48_1434 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily CH48_1434 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal CH48_1434 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily CH48_1434 IPR023459 Transcription elongation factor GreA/GreB family CH48_1434 IPR018151 Transcription elongation factor, GreA/GreB, conserved site CH48_1439 IPR010994 RuvA domain 2-like CH48_1439 IPR006641 YqgF/RNase H-like domain CH48_1439 IPR037027 YqgF/RNase H-like domain superfamily CH48_1439 IPR023323 Tex-like domain superfamily CH48_1439 IPR023319 Tex-like protein, HTH domain superfamily CH48_1439 IPR032639 Tex protein, YqgF-like domain CH48_1439 IPR012340 Nucleic acid-binding, OB-fold CH48_1439 IPR018974 Tex-like protein, N-terminal CH48_1439 IPR012337 Ribonuclease H-like superfamily CH48_1439 IPR003029 S1 domain CH48_1439 IPR022967 RNA-binding domain, S1 CH48_1439 IPR041692 HHH domain 9 CH48_144 IPR005642 Lysine exporter LysO CH48_1440 IPR038157 Ferrous iron transporter, core domain CH48_1440 IPR008988 Transcriptional repressor, C-terminal CH48_1440 IPR007167 Ferrous iron transporter FeoA domain CH48_1441 IPR011640 Ferrous iron transport protein B, C-terminal CH48_1441 IPR041069 FeoB, cytosolic helical domain CH48_1441 IPR030389 FeoB-type guanine nucleotide-binding (G) domain CH48_1441 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain CH48_1441 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1441 IPR003373 Ferrous iron transport protein B CH48_1442 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_1442 IPR036390 Winged helix DNA-binding domain superfamily CH48_1442 IPR015102 Transcriptional regulator HTH-type, FeoC CH48_1442 IPR023732 Probable [Fe-S]-dependent transcriptional repressor CH48_1443 IPR010854 Domain of unknown function DUF1471 CH48_1443 IPR036275 YdgH-like superfamily CH48_1443 IPR025543 Dodecin-like CH48_1444 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase CH48_1444 IPR029058 Alpha/Beta hydrolase fold CH48_1444 IPR000073 Alpha/beta hydrolase fold-1 CH48_1445 IPR029057 Phosphoribosyltransferase-like CH48_1445 IPR005222 Competence protein ComF CH48_1445 IPR000836 Phosphoribosyltransferase domain CH48_1446 IPR000361 FeS cluster biogenesis CH48_1446 IPR035903 HesB-like domain superfamily CH48_1446 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal CH48_1446 IPR034904 Fe-S cluster assembly domain superfamily CH48_1446 IPR017726 Fe/S biogenesis protein NfuA CH48_1449 IPR003385 Glycoside hydrolase, family 77 CH48_1449 IPR017853 Glycoside hydrolase superfamily CH48_145 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase CH48_145 IPR016100 Prismane, alpha-bundle CH48_145 IPR011254 Prismane-like superfamily CH48_145 IPR016099 Prismane-like, alpha/beta-sandwich CH48_145 IPR010048 Hydroxylamine reductase CH48_1450 IPR000811 Glycosyl transferase, family 35 CH48_1450 IPR011833 Glycogen/starch/alpha-glucan phosphorylase CH48_1450 IPR035090 Phosphorylase pyridoxal-phosphate attachment site CH48_1452 IPR011833 Glycogen/starch/alpha-glucan phosphorylase CH48_1452 IPR000811 Glycosyl transferase, family 35 CH48_1452 IPR035090 Phosphorylase pyridoxal-phosphate attachment site CH48_1453 IPR023768 Transcriptional regulator HTH-type, MalT CH48_1453 IPR016032 Signal transduction response regulator, C-terminal effector CH48_1453 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_1453 IPR000792 Transcription regulator LuxR, C-terminal CH48_1453 IPR041617 MalT-like TPR region CH48_1453 IPR011990 Tetratricopeptide-like helical domain superfamily CH48_1453 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1455 IPR001763 Rhodanese-like domain CH48_1455 IPR023695 Thiosulfate sulfurtransferase, bacterial CH48_1455 IPR036873 Rhodanese-like domain superfamily CH48_1456 IPR038236 GlpG peptidase, N-terminal domain superfamily CH48_1456 IPR022764 Peptidase S54, rhomboid domain CH48_1456 IPR022732 Peptidase S54, GlpG peptidase, N-terminal CH48_1456 IPR023662 Rhomboid protease GlpG CH48_1456 IPR035952 Rhomboid-like superfamily CH48_1457 IPR014036 DeoR C-terminal sensor domain CH48_1457 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_1457 IPR036390 Winged helix DNA-binding domain superfamily CH48_1457 IPR037171 NagB/RpiA transferase-like CH48_1457 IPR001034 DeoR-type HTH domain CH48_1457 IPR018356 Transcription regulator, HTH DeoR-type, conserved site CH48_1459 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase CH48_1459 IPR006076 FAD dependent oxidoreductase CH48_1459 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily CH48_1459 IPR031656 Alpha-glycerophosphate oxidase, C-terminal CH48_1459 IPR036188 FAD/NAD(P)-binding domain superfamily CH48_146 IPR036010 2Fe-2S ferredoxin-like superfamily CH48_146 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CH48_146 IPR012675 Beta-grasp domain superfamily CH48_146 IPR017927 FAD-binding domain, ferredoxin reductase-type CH48_146 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain CH48_146 IPR017938 Riboflavin synthase-like beta-barrel CH48_146 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CH48_146 IPR001433 Oxidoreductase FAD/NAD(P)-binding CH48_146 IPR000951 Phthalate dioxygenase reductase CH48_1460 IPR035090 Phosphorylase pyridoxal-phosphate attachment site CH48_1460 IPR000811 Glycosyl transferase, family 35 CH48_1460 IPR011833 Glycogen/starch/alpha-glucan phosphorylase CH48_1461 IPR013534 Starch synthase, catalytic domain CH48_1461 IPR001296 Glycosyl transferase, family 1 CH48_1461 IPR011835 Bacterial/plant glycogen synthase CH48_1462 IPR011004 Trimeric LpxA-like superfamily CH48_1462 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial CH48_1462 IPR005836 ADP-glucose pyrophosphorylase, conserved site CH48_1462 IPR011831 Glucose-1-phosphate adenylyltransferase CH48_1462 IPR029044 Nucleotide-diphospho-sugar transferases CH48_1462 IPR005835 Nucleotidyl transferase domain CH48_1463 IPR017853 Glycoside hydrolase superfamily CH48_1463 IPR040784 Glycogen debranching enzyme, C-terminal domain CH48_1463 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CH48_1463 IPR013783 Immunoglobulin-like fold CH48_1463 IPR011837 Glycogen debranching enzyme, GlgX type CH48_1463 IPR014756 Immunoglobulin E-set CH48_1463 IPR013780 Glycosyl hydrolase, all-beta CH48_1463 IPR022844 Glycogen debranching enzyme, bacterial CH48_1463 IPR004193 Glycoside hydrolase, family 13, N-terminal CH48_1464 IPR013783 Immunoglobulin-like fold CH48_1464 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta CH48_1464 IPR014756 Immunoglobulin E-set CH48_1464 IPR037439 1,4-alpha-glucan-branching enzyme CH48_1464 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CH48_1464 IPR004193 Glycoside hydrolase, family 13, N-terminal CH48_1464 IPR013780 Glycosyl hydrolase, all-beta CH48_1464 IPR017853 Glycoside hydrolase superfamily CH48_1464 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB CH48_1465 IPR005119 LysR, substrate-binding CH48_1465 IPR000847 Transcription regulator HTH, LysR CH48_1465 IPR037410 HTH-type transcriptional regulator BudR, PBP2 domain CH48_1465 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_1465 IPR036390 Winged helix DNA-binding domain superfamily CH48_1466 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH48_1466 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region CH48_1466 IPR010559 Signal transduction histidine kinase, internal region CH48_1466 IPR003018 GAF domain CH48_1467 IPR005128 Alpha-acetolactate decarboxylase CH48_1468 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CH48_1468 IPR000399 TPP-binding enzyme, conserved site CH48_1468 IPR012782 Acetolactate synthase, catabolic CH48_1468 IPR029035 DHS-like NAD/FAD-binding domain superfamily CH48_1468 IPR012000 Thiamine pyrophosphate enzyme, central domain CH48_1468 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CH48_1468 IPR029061 Thiamin diphosphate-binding fold CH48_1469 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site CH48_1469 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type CH48_1469 IPR012280 Semialdehyde dehydrogenase, dimerisation domain CH48_1469 IPR036291 NAD(P)-binding domain superfamily CH48_1469 IPR000534 Semialdehyde dehydrogenase, NAD-binding CH48_1469 IPR012080 Aspartate-semialdehyde dehydrogenase CH48_147 IPR000399 TPP-binding enzyme, conserved site CH48_147 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CH48_147 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CH48_147 IPR029061 Thiamin diphosphate-binding fold CH48_147 IPR029035 DHS-like NAD/FAD-binding domain superfamily CH48_147 IPR012000 Thiamine pyrophosphate enzyme, central domain CH48_1470 IPR002771 Multiple antibiotic resistance (MarC)-related CH48_1471 IPR006001 Carbohydrate kinase, thermoresistant glucokinase CH48_1471 IPR031322 Shikimate kinase/gluconokinase CH48_1471 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1472 IPR003474 Gluconate transporter CH48_1473 IPR000843 LacI-type HTH domain CH48_1473 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CH48_1473 IPR001761 Periplasmic binding protein/LacI sugar binding domain CH48_1473 IPR028082 Periplasmic binding protein-like I CH48_1474 IPR014710 RmlC-like jelly roll fold CH48_1474 IPR011051 RmlC-like cupin domain superfamily CH48_1474 IPR012093 Pirin CH48_1474 IPR003829 Pirin, N-terminal domain CH48_1474 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain CH48_1475 IPR016181 Acyl-CoA N-acyltransferase CH48_1475 IPR000182 GNAT domain CH48_1476 IPR013022 Xylose isomerase-like, TIM barrel domain CH48_1476 IPR036237 Xylose isomerase-like superfamily CH48_1476 IPR030823 IolE/MocC family CH48_1476 IPR023952 Inosose dehydratase CH48_1477 IPR004104 Oxidoreductase, C-terminal CH48_1477 IPR023794 Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase CH48_1477 IPR000683 Oxidoreductase, N-terminal CH48_1477 IPR036291 NAD(P)-binding domain superfamily CH48_1478 IPR029061 Thiamin diphosphate-binding fold CH48_1478 IPR023757 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase, Firmicutes CH48_1478 IPR030817 3,5/4-Trihydroxycyclohexa-1,2-dione hydrolase CH48_1478 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CH48_1478 IPR000399 TPP-binding enzyme, conserved site CH48_1478 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CH48_1478 IPR029035 DHS-like NAD/FAD-binding domain superfamily CH48_1478 IPR012000 Thiamine pyrophosphate enzyme, central domain CH48_1479 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CH48_1479 IPR022841 5-dehydro-2-deoxygluconokinase, Firmicutes CH48_1479 IPR030830 5-Dehydro-2-deoxygluconokinase CH48_1479 IPR029056 Ribokinase-like CH48_1479 IPR011611 Carbohydrate kinase PfkB CH48_1479 IPR023314 5-Dehydro-2-deoxygluconokinase-like superfamily CH48_148 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp CH48_148 IPR011610 S-adenosyl-L-methionine-dependent methyltransferase, putative CH48_148 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH48_1481 IPR023770 5-deoxy-glucuronate isomerase, Bacilli CH48_1481 IPR011051 RmlC-like cupin domain superfamily CH48_1481 IPR014710 RmlC-like jelly roll fold CH48_1481 IPR021120 KduI/IolB isomerase CH48_1481 IPR024203 5-deoxy-glucuronate isomerase, IolB CH48_1482 IPR016163 Aldehyde dehydrogenase, C-terminal CH48_1482 IPR016161 Aldehyde/histidinol dehydrogenase CH48_1482 IPR016160 Aldehyde dehydrogenase, cysteine active site CH48_1482 IPR010061 Methylmalonate-semialdehyde dehydrogenase CH48_1482 IPR015590 Aldehyde dehydrogenase domain CH48_1482 IPR016162 Aldehyde dehydrogenase, N-terminal CH48_1483 IPR036259 MFS transporter superfamily CH48_1483 IPR011701 Major facilitator superfamily CH48_1483 IPR020846 Major facilitator superfamily domain CH48_1484 IPR000847 Transcription regulator HTH, LysR CH48_1484 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_1484 IPR036390 Winged helix DNA-binding domain superfamily CH48_1484 IPR005119 LysR, substrate-binding CH48_1486 IPR036412 HAD-like superfamily CH48_1486 IPR000150 Cof family CH48_1486 IPR023214 HAD superfamily CH48_1486 IPR006379 HAD-superfamily hydrolase, subfamily IIB CH48_1487 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1487 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR CH48_1488 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily CH48_1488 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain CH48_1488 IPR011167 Iron-dependent fumarate hydratase CH48_1488 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain CH48_1488 IPR020557 Fumarate lyase, conserved site CH48_1489 IPR005119 LysR, substrate-binding CH48_1489 IPR036390 Winged helix DNA-binding domain superfamily CH48_1489 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_1489 IPR000847 Transcription regulator HTH, LysR CH48_149 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CH48_149 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CH48_149 IPR015424 Pyridoxal phosphate-dependent transferase CH48_149 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase CH48_149 IPR023603 Threonine aldolase CH48_1490 IPR036291 NAD(P)-binding domain superfamily CH48_1490 IPR006366 Uroporphyrin-III C-methyltransferase CH48_1490 IPR037115 Sirohaem synthase, dimerisation domain superfamily CH48_1490 IPR028281 Siroheme synthase, central domain CH48_1490 IPR006367 Sirohaem synthase, N-terminal CH48_1490 IPR019478 Sirohaem synthase, dimerisation domain CH48_1490 IPR014776 Tetrapyrrole methylase, subdomain 2 CH48_1490 IPR012409 Sirohaem synthase CH48_1490 IPR014777 Tetrapyrrole methylase, subdomain 1 CH48_1490 IPR035996 Tetrapyrrole methylase superfamily CH48_1490 IPR000878 Tetrapyrrole methylase CH48_1490 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site CH48_1491 IPR006204 GHMP kinase N-terminal domain CH48_1491 IPR012363 Propanediol utilisation/coumermycin biosynthesis, PduX-related CH48_1491 IPR020568 Ribosomal protein S5 domain 2-type fold CH48_1491 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CH48_1492 IPR006394 Glutamate mutase sigma subunit CH48_1492 IPR036724 Cobalamin-binding domain superfamily CH48_1492 IPR006158 Cobalamin (vitamin B12)-binding domain CH48_1493 IPR006230 Protein MutL CH48_1494 IPR006396 Glutamate mutase epsilon subunit CH48_1494 IPR014714 Glutamate mutase E subunit, C-terminal domain superfamily CH48_1494 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic CH48_1495 IPR036849 Enolase-like, C-terminal domain superfamily CH48_1495 IPR029017 Enolase-like, N-terminal CH48_1495 IPR006395 Methylaspartate ammonia-lyase CH48_1495 IPR022662 Methylaspartate ammonia-lyase, C-terminal CH48_1495 IPR022665 Methylaspartate ammonia-lyase, N-terminal CH48_1498 IPR036458 Sodium:dicarboxylate symporter superfamily CH48_1498 IPR018107 Sodium:dicarboxylate symporter, conserved site CH48_1498 IPR001991 Sodium:dicarboxylate symporter CH48_1498 IPR023954 C4-dicarboxylate transport protein CH48_1499 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like CH48_1499 IPR036188 FAD/NAD(P)-binding domain superfamily CH48_1499 IPR023166 HI0933-like insert domain superfamily CH48_15 IPR010391 DNA damage-inducible protein DinI-like CH48_15 IPR036687 DinI-like superfamily CH48_150 IPR036291 NAD(P)-binding domain superfamily CH48_150 IPR021295 Protein of unknown function DUF2867 CH48_150 IPR016040 NAD(P)-binding domain CH48_1500 IPR001204 Phosphate transporter CH48_1501 IPR019598 Universal stress protein B CH48_1502 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH48_1502 IPR006015 Universal stress protein A family CH48_1502 IPR006016 UspA CH48_1503 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain CH48_1503 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal CH48_1503 IPR033922 NAD(P) binding domain of glutamate dehydrogenase CH48_1503 IPR033524 Leu/Phe/Val dehydrogenases active site CH48_1503 IPR014362 Glutamate dehydrogenase CH48_1503 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase CH48_1503 IPR036291 NAD(P)-binding domain superfamily CH48_1504 IPR018511 Hemolysin-type calcium-binding conserved site CH48_1504 IPR001818 Peptidase M10, metallopeptidase CH48_1504 IPR034033 Serralysin-like metallopeptidase domain CH48_1504 IPR011049 Serralysin-like metalloprotease, C-terminal CH48_1504 IPR016294 Peptidase M10B CH48_1504 IPR024079 Metallopeptidase, catalytic domain superfamily CH48_1504 IPR006026 Peptidase, metallopeptidase CH48_1504 IPR013858 Peptidase M10 serralysin, C-terminal CH48_1504 IPR001343 RTX calcium-binding nonapeptide repeat CH48_1505 IPR007536 Ribosomal RNA small subunit methyltransferase J CH48_1505 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH48_1506 IPR001567 Peptidase M3A/M3B catalytic domain CH48_1506 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 CH48_1507 IPR007473 Ribosomal RNA large subunit methyltransferase J CH48_1507 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH48_1507 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CH48_1508 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CH48_1508 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site CH48_1508 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I CH48_1508 IPR023753 FAD/NAD(P)-binding domain CH48_1508 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily CH48_1508 IPR036188 FAD/NAD(P)-binding domain superfamily CH48_1508 IPR006322 Glutathione reductase, eukaryote/bacterial CH48_1509 IPR036709 Autotransporter beta-domain superfamily CH48_1509 IPR005546 Autotransporter beta-domain CH48_1509 IPR011050 Pectin lyase fold/virulence factor CH48_1509 IPR006315 Outer membrane autotransporter barrel CH48_1509 IPR012332 P22 tailspike-like, C-terminal domain superfamily CH48_151 IPR001509 NAD-dependent epimerase/dehydratase CH48_151 IPR036291 NAD(P)-binding domain superfamily CH48_1510 IPR017039 Virulence factor BrkB CH48_1510 IPR005274 Inner membrane protein YhjD CH48_1511 IPR003763 CDP-diacylglycerol pyrophosphatase CH48_1511 IPR036265 HIT-like superfamily CH48_1511 IPR038433 CDP-diacylglycerol pyrophosphatase superfamily CH48_1512 IPR007844 AsmA CH48_1513 IPR001633 EAL domain CH48_1513 IPR035919 EAL domain superfamily CH48_1514 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type CH48_1514 IPR004370 4-oxalocrotonate tautomerase CH48_1514 IPR014347 Tautomerase/MIF superfamily CH48_1516 IPR029056 Ribokinase-like CH48_1516 IPR011611 Carbohydrate kinase PfkB CH48_1516 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CH48_1517 IPR011765 Peptidase M16, N-terminal CH48_1517 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like CH48_1517 IPR007863 Peptidase M16, C-terminal CH48_1518 IPR001991 Sodium:dicarboxylate symporter CH48_1518 IPR023954 C4-dicarboxylate transport protein CH48_1518 IPR018107 Sodium:dicarboxylate symporter, conserved site CH48_1518 IPR036458 Sodium:dicarboxylate symporter superfamily CH48_152 IPR024289 Domain of unknown function DUF3828 CH48_1520 IPR010702 Periplasmic pectate lyase CH48_1521 IPR009331 Oligogalacturonate-specific porin CH48_1522 IPR000160 GGDEF domain CH48_1522 IPR003660 HAMP domain CH48_1522 IPR029787 Nucleotide cyclase CH48_1522 IPR033419 Gammaproteobacterial periplasmic sensor domain GAPES3 CH48_1522 IPR001633 EAL domain CH48_1522 IPR035919 EAL domain superfamily CH48_1525 IPR008928 Six-hairpin glycosidase superfamily CH48_1525 IPR019834 Glycoside hydrolase, family 8, conserved site CH48_1525 IPR002037 Glycoside hydrolase, family 8 CH48_1525 IPR012341 Six-hairpin glycosidase-like superfamily CH48_1526 IPR003920 Cellulose synthase, subunit B CH48_1526 IPR018513 Cellulose synthase BcsB, bacterial CH48_1526 IPR008979 Galactose-binding-like domain superfamily CH48_1527 IPR001173 Glycosyltransferase 2-like CH48_1527 IPR005150 Cellulose synthase CH48_1527 IPR009875 PilZ domain CH48_1527 IPR029044 Nucleotide-diphospho-sugar transferases CH48_1527 IPR003919 Cellulose synthase, subunit A CH48_1528 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1528 IPR017746 Cellulose synthase operon protein BcsQ CH48_153 IPR003439 ABC transporter-like CH48_153 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_153 IPR017871 ABC transporter, conserved site CH48_153 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type CH48_153 IPR003593 AAA+ ATPase domain CH48_1530 IPR017745 Cellulose biosynthesis protein BcsE CH48_1531 IPR019995 Cellulose biosynthesis, BcsF/YhjT CH48_1532 IPR017850 Alkaline-phosphatase-like, core domain superfamily CH48_1532 IPR017744 Cellulose biosynthesis protein BcsG CH48_1533 IPR017871 ABC transporter, conserved site CH48_1533 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1533 IPR003593 AAA+ ATPase domain CH48_1533 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CH48_1533 IPR003439 ABC transporter-like CH48_1534 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CH48_1534 IPR003593 AAA+ ATPase domain CH48_1534 IPR017871 ABC transporter, conserved site CH48_1534 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1534 IPR003439 ABC transporter-like CH48_1535 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CH48_1535 IPR035906 MetI-like superfamily CH48_1535 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CH48_1536 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CH48_1536 IPR035906 MetI-like superfamily CH48_1537 IPR030678 Peptide/nickel binding protein, MppA-type CH48_1537 IPR039424 Solute-binding protein family 5 CH48_1537 IPR023765 Solute-binding protein family 5, conserved site CH48_1537 IPR000914 Solute-binding protein family 5 domain CH48_1539 IPR015946 K homology domain-like, alpha/beta CH48_1539 IPR019953 Organic hydroperoxide resistance protein famiy CH48_1539 IPR036102 OsmC/Ohr superfamily CH48_1539 IPR003718 OsmC/Ohr family CH48_154 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CH48_154 IPR001320 Ionotropic glutamate receptor CH48_154 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter CH48_154 IPR018313 Solute-binding protein family 3, conserved site CH48_1540 IPR000917 Sulfatase, N-terminal CH48_1540 IPR017850 Alkaline-phosphatase-like, core domain superfamily CH48_1540 IPR012549 Phosphoethanolamine transferase, N-terminal CH48_1540 IPR040423 Phosphoethanolamine transferase CH48_1541 IPR001789 Signal transduction response regulator, receiver domain CH48_1541 IPR011006 CheY-like superfamily CH48_1541 IPR000792 Transcription regulator LuxR, C-terminal CH48_1541 IPR016032 Signal transduction response regulator, C-terminal effector CH48_1542 IPR007895 MASE1 CH48_1542 IPR003594 Histidine kinase/HSP90-like ATPase CH48_1542 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH48_1542 IPR005467 Histidine kinase domain CH48_1542 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain CH48_1543 IPR020846 Major facilitator superfamily domain CH48_1543 IPR021159 Glycerate/sugar phosphate transporter, conserved site CH48_1543 IPR036259 MFS transporter superfamily CH48_1543 IPR000849 Sugar phosphate transporter CH48_1543 IPR011701 Major facilitator superfamily CH48_1545 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CH48_1545 IPR029501 Bacterial EndoU nuclease CH48_1545 IPR008638 Filamentous haemagglutinin, N-terminal CH48_1545 IPR025157 Hemagglutinin repeat CH48_1545 IPR012334 Pectin lyase fold CH48_1545 IPR008619 Filamentous haemagglutinin repeat CH48_1545 IPR011050 Pectin lyase fold/virulence factor CH48_1545 IPR006914 VENN motif-containing domain CH48_1546 IPR027282 Two partner secretion pathway transporter CH48_1546 IPR035251 ShlB, POTRA domain CH48_1546 IPR005565 Haemolysin activator HlyB, C-terminal CH48_1546 IPR034746 POTRA domain CH48_1546 IPR013686 Polypeptide-transport-associated, ShlB-type CH48_1547 IPR012334 Pectin lyase fold CH48_1547 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CH48_1547 IPR024973 ESPR domain CH48_1547 IPR025157 Hemagglutinin repeat CH48_1547 IPR008638 Filamentous haemagglutinin, N-terminal CH48_1547 IPR006914 VENN motif-containing domain CH48_1547 IPR011050 Pectin lyase fold/virulence factor CH48_1548 IPR012354 Esterase/lipase CH48_1548 IPR022742 Serine aminopeptidase, S33 CH48_1548 IPR029058 Alpha/Beta hydrolase fold CH48_1549 IPR001207 Transposase, mutator type CH48_155 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CH48_155 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CH48_155 IPR035906 MetI-like superfamily CH48_1550 IPR009610 CbtA toxin of type IV toxin-antitoxin system CH48_1554 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CH48_1554 IPR000843 LacI-type HTH domain CH48_1554 IPR028082 Periplasmic binding protein-like I CH48_1555 IPR000600 ROK family CH48_1556 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit CH48_1556 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily CH48_1557 IPR004796 Phosphotransferase system, cellobiose-type IIC component CH48_1557 IPR004501 Phosphotransferase system, EIIC component, type 3 CH48_1557 IPR003352 Phosphotransferase system, EIIC CH48_1558 IPR036095 PTS system IIB component-like superfamily CH48_1558 IPR003501 Phosphotransferase system, EIIB component, type 2/3 CH48_1558 IPR013012 Phosphotransferase system, EIIB component, type 3 CH48_1559 IPR004796 Phosphotransferase system, cellobiose-type IIC component CH48_1559 IPR004501 Phosphotransferase system, EIIC component, type 3 CH48_1559 IPR003352 Phosphotransferase system, EIIC CH48_156 IPR035906 MetI-like superfamily CH48_156 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CH48_156 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CH48_1561 IPR023738 Maltoporin CH48_1561 IPR036998 Porin, LamB-type superfamily CH48_1561 IPR003192 Porin, LamB-type CH48_1563 IPR018120 Glycoside hydrolase family 1, active site CH48_1563 IPR001360 Glycoside hydrolase family 1 CH48_1563 IPR017853 Glycoside hydrolase superfamily CH48_1564 IPR018050 Phosphomannose isomerase, type I, conserved site CH48_1564 IPR001250 Mannose-6-phosphate isomerase, type I CH48_1564 IPR011051 RmlC-like cupin domain superfamily CH48_1564 IPR016305 Mannose-6-phosphate isomerase CH48_1564 IPR014710 RmlC-like jelly roll fold CH48_1566 IPR042186 Outer membrane usher protein FimD, plug domain CH48_1566 IPR025885 PapC, N-terminal domain CH48_1566 IPR018030 Fimbrial membrane usher, conserved site CH48_1566 IPR000015 Outer membrane usher protein CH48_1566 IPR025949 PapC-like, C-terminal domain CH48_1566 IPR037224 PapC, N-terminal domain superfamily CH48_1568 IPR038364 Urocanase, central domain superfamily CH48_1568 IPR035400 Urocanase, N-terminal domain CH48_1568 IPR036190 Urocanase superfamily CH48_1568 IPR023637 Urocanase CH48_1568 IPR035401 Urocanase, C-terminal domain CH48_1568 IPR035085 Urocanase, Rossmann-like domain CH48_1568 IPR023636 Urocanase conserved site CH48_1569 IPR008948 L-Aspartase-like CH48_1569 IPR005921 Histidine ammonia-lyase CH48_1569 IPR024083 Fumarase/histidase, N-terminal CH48_1569 IPR022313 Phenylalanine/histidine ammonia-lyases, active site CH48_1569 IPR001106 Aromatic amino acid lyase CH48_157 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter CH48_157 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CH48_157 IPR001320 Ionotropic glutamate receptor CH48_157 IPR018313 Solute-binding protein family 3, conserved site CH48_1570 IPR004840 Amino acid permease, conserved site CH48_1570 IPR004841 Amino acid permease/ SLC12A domain CH48_1571 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1571 IPR002611 IstB-like ATP-binding protein CH48_1571 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CH48_1571 IPR003593 AAA+ ATPase domain CH48_1571 IPR001270 ClpA/B family CH48_1576 IPR007684 Zinc finger, Ogr/Delta-type CH48_1578 IPR011010 DNA breaking-rejoining enzyme, catalytic core CH48_1578 IPR004107 Integrase, SAM-like, N-terminal CH48_1578 IPR013762 Integrase-like, catalytic domain superfamily CH48_1578 IPR010998 Integrase/recombinase, N-terminal CH48_1578 IPR025166 Integrase, DNA-binding domain CH48_1578 IPR038488 Integrase, DNA-binding domain superfamily CH48_1578 IPR002104 Integrase, catalytic domain CH48_158 IPR010280 (Uracil-5)-methyltransferase family CH48_158 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH48_158 IPR030391 RNA methyltransferase TrmA, conserved site CH48_158 IPR030390 RNA methyltransferase TrmA, active site CH48_158 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC CH48_1580 IPR018060 DNA binding HTH domain, AraC-type CH48_1580 IPR028082 Periplasmic binding protein-like I CH48_1580 IPR020449 Transcription regulator HTH, AraC- type CH48_1580 IPR009057 Homeobox-like domain superfamily CH48_1580 IPR018062 HTH domain AraC-type, conserved site CH48_1581 IPR001851 ABC transporter, permease CH48_1582 IPR013455 ABC transporter, D-xylose, ATP-binding protein CH48_1582 IPR017871 ABC transporter, conserved site CH48_1582 IPR003593 AAA+ ATPase domain CH48_1582 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1582 IPR003439 ABC transporter-like CH48_1583 IPR013456 D-xylose ABC transporter, substrate-binding protein CH48_1583 IPR028082 Periplasmic binding protein-like I CH48_1583 IPR025997 Periplasmic binding protein CH48_1584 IPR036237 Xylose isomerase-like superfamily CH48_1584 IPR013452 Xylose isomerase, bacterial-type CH48_1584 IPR001998 Xylose isomerase CH48_1585 IPR006000 Xylulokinase CH48_1585 IPR018484 Carbohydrate kinase, FGGY, N-terminal CH48_1585 IPR018483 Carbohydrate kinase, FGGY, conserved site CH48_1585 IPR018485 Carbohydrate kinase, FGGY, C-terminal CH48_1585 IPR000577 Carbohydrate kinase, FGGY CH48_1586 IPR018046 Pili assembly chaperone, conserved site CH48_1586 IPR008962 PapD-like superfamily CH48_1586 IPR013783 Immunoglobulin-like fold CH48_1586 IPR016147 Pili assembly chaperone, N-terminal CH48_1586 IPR001829 Pili assembly chaperone, bacterial CH48_1586 IPR036316 Pili assembly chaperone, C-terminal domain superfamily CH48_1586 IPR016148 Pili assembly chaperone, C-terminal CH48_1588 IPR002656 Acyltransferase 3 CH48_1588 IPR032905 O-acetyltransferase WecH CH48_159 IPR019703 Protein of unknown function DUF2593 CH48_1590 IPR036259 MFS transporter superfamily CH48_1590 IPR020846 Major facilitator superfamily domain CH48_1590 IPR011701 Major facilitator superfamily CH48_1591 IPR004161 Translation elongation factor EFTu-like, domain 2 CH48_1591 IPR015190 Translation elongation factor SelB, winged helix, type 2 CH48_1591 IPR015191 Translation elongation factor SelB, winged helix, type 3 CH48_1591 IPR000795 Transcription factor, GTP-binding domain CH48_1591 IPR031157 Tr-type G domain, conserved site CH48_1591 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1591 IPR009000 Translation protein, beta-barrel domain superfamily CH48_1591 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CH48_1591 IPR004535 Translation elongation factor, selenocysteine-specific CH48_1591 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_1591 IPR036390 Winged helix DNA-binding domain superfamily CH48_1592 IPR018319 L-seryl-tRNA selenium transferase-like CH48_1592 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CH48_1592 IPR015424 Pyridoxal phosphate-dependent transferase CH48_1592 IPR004534 L-seryl-tRNA(Sec) selenium transferase CH48_1592 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain CH48_1593 IPR006452 Formate dehydrogenase accessory protein CH48_1593 IPR024064 FdhE-like superfamily CH48_1594 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase CH48_1594 IPR006471 Formate dehydrogenase, gamma subunit CH48_1594 IPR016174 Di-haem cytochrome, transmembrane CH48_1595 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria CH48_1595 IPR015246 Formate dehydrogenase, transmembrane CH48_1595 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CH48_1595 IPR038384 Formate dehydrogenase, C-terminal domain superfamily CH48_1595 IPR014603 Formate dehydrogenase iron-sulphur subunit CH48_1595 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CH48_1596 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site CH48_1596 IPR009010 Aspartate decarboxylase-like domain superfamily CH48_1596 IPR006443 Formate dehydrogenase-N, alpha subunit CH48_1596 IPR006657 Molybdopterin dinucleotide-binding domain CH48_1596 IPR006656 Molybdopterin oxidoreductase CH48_1596 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CH48_1596 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site CH48_1596 IPR006311 Twin-arginine translocation pathway, signal sequence CH48_1597 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site CH48_1597 IPR009010 Aspartate decarboxylase-like domain superfamily CH48_1597 IPR006311 Twin-arginine translocation pathway, signal sequence CH48_1597 IPR006657 Molybdopterin dinucleotide-binding domain CH48_1597 IPR006656 Molybdopterin oxidoreductase CH48_1597 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CH48_1597 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site CH48_1597 IPR006443 Formate dehydrogenase-N, alpha subunit CH48_1598 IPR016193 Cytidine deaminase-like CH48_1598 IPR003786 Sulfur carrier protein FdhD CH48_1599 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily CH48_1599 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily CH48_1599 IPR019831 Manganese/iron superoxide dismutase, N-terminal CH48_1599 IPR019832 Manganese/iron superoxide dismutase, C-terminal CH48_1599 IPR019833 Manganese/iron superoxide dismutase, binding site CH48_1599 IPR001189 Manganese/iron superoxide dismutase CH48_16 IPR025730 Biofilm regulator BssS CH48_160 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CH48_160 IPR035906 MetI-like superfamily CH48_1600 IPR003660 HAMP domain CH48_1600 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily CH48_1600 IPR004090 Chemotaxis methyl-accepting receptor CH48_1600 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CH48_1600 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CH48_1600 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding CH48_1601 IPR005302 Molybdenum cofactor sulfurase, C-terminal CH48_1601 IPR005163 3-alpha domain CH48_1601 IPR011037 Pyruvate kinase-like, insert domain superfamily CH48_1602 IPR022907 VapC family CH48_1602 IPR029060 PIN-like domain superfamily CH48_1602 IPR002716 PIN domain CH48_1603 IPR037914 SpoVT-AbrB domain superfamily CH48_1603 IPR007159 SpoVT-AbrB domain CH48_1604 IPR021230 Protein of unknown function DUF2810 CH48_1605 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CH48_1605 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CH48_1605 IPR015424 Pyridoxal phosphate-dependent transferase CH48_1605 IPR000524 Transcription regulator HTH, GntR CH48_1605 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_1605 IPR036390 Winged helix DNA-binding domain superfamily CH48_1605 IPR004839 Aminotransferase, class I/classII CH48_1606 IPR007761 Mannitol repressor MtlR-like CH48_1606 IPR038026 MtlR-like superfamily CH48_1608 IPR036291 NAD(P)-binding domain superfamily CH48_1608 IPR013131 Mannitol dehydrogenase, N-terminal CH48_1608 IPR023027 Mannitol dehydrogenase, conserved site CH48_1608 IPR013118 Mannitol dehydrogenase, C-terminal CH48_1608 IPR000669 Mannitol dehydrogenase CH48_1608 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CH48_1608 IPR023028 Mannitol-1-phosphate 5-dehydrogenase CH48_1608 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CH48_1609 IPR013014 Phosphotransferase system, EIIC component, type 2 CH48_1609 IPR016152 Phosphotransferase/anion transporter CH48_1609 IPR002178 PTS EIIA type-2 domain CH48_1609 IPR036095 PTS system IIB component-like superfamily CH48_1609 IPR013011 Phosphotransferase system, EIIB component, type 2 CH48_1609 IPR003501 Phosphotransferase system, EIIB component, type 2/3 CH48_1609 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC CH48_1609 IPR003352 Phosphotransferase system, EIIC CH48_1609 IPR029503 Phosphotransferase system EIIB component, mannitol-specific CH48_161 IPR035906 MetI-like superfamily CH48_161 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CH48_1610 IPR021413 Protein of unknown function DUF3053 CH48_1611 IPR008909 DALR anticodon binding CH48_1611 IPR015944 Glycine-tRNA ligase, beta subunit CH48_1611 IPR006194 Glycine-tRNA synthetase, heterodimeric CH48_1612 IPR006194 Glycine-tRNA synthetase, heterodimeric CH48_1612 IPR002310 Glycine-tRNA ligase, alpha subunit CH48_1613 IPR011257 DNA glycosylase CH48_1613 IPR005019 Methyladenine glycosylase CH48_1613 IPR004597 DNA-3-methyladenine glycosylase I CH48_1614 IPR016181 Acyl-CoA N-acyltransferase CH48_1614 IPR000182 GNAT domain CH48_1619 IPR011701 Major facilitator superfamily CH48_1619 IPR036259 MFS transporter superfamily CH48_1619 IPR020846 Major facilitator superfamily domain CH48_162 IPR008995 Molybdate/tungstate binding, C-terminal CH48_162 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_162 IPR017871 ABC transporter, conserved site CH48_162 IPR013611 Transport-associated OB, type 2 CH48_162 IPR003593 AAA+ ATPase domain CH48_162 IPR003439 ABC transporter-like CH48_162 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit CH48_1620 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CH48_1620 IPR023756 Glyoxylate/hydroxypyruvate reductase B CH48_1620 IPR036291 NAD(P)-binding domain superfamily CH48_1620 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CH48_1620 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CH48_1620 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CH48_1621 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CH48_1621 IPR014635 Alpha-amylase, MalS type CH48_1621 IPR017853 Glycoside hydrolase superfamily CH48_1622 IPR015424 Pyridoxal phosphate-dependent transferase CH48_1622 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CH48_1622 IPR004839 Aminotransferase, class I/classII CH48_1623 IPR006512 YidE/YbjL duplication CH48_1623 IPR006037 Regulator of K+ conductance, C-terminal CH48_1623 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily CH48_1623 IPR023018 Transport protein YidE, putative CH48_1625 IPR002068 Alpha crystallin/Hsp20 domain CH48_1625 IPR037913 Small heat shock protein IbpA/IbpB, ACD domain CH48_1625 IPR008978 HSP20-like chaperone CH48_1625 IPR022848 Small heat shock protein IbpB CH48_1626 IPR002068 Alpha crystallin/Hsp20 domain CH48_1626 IPR023728 Small heat shock protein IbpA CH48_1626 IPR008978 HSP20-like chaperone CH48_1626 IPR037913 Small heat shock protein IbpA/IbpB, ACD domain CH48_1627 IPR010780 Protein of unknown function DUF1375 CH48_1628 IPR011042 Six-bladed beta-propeller, TolB-like CH48_1628 IPR022223 Protein of unknown function DUF3748 CH48_1628 IPR011659 WD40-like Beta Propeller CH48_1629 IPR005789 Threonine dehydratase, catabolic CH48_1629 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CH48_1629 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site CH48_1629 IPR001926 Pyridoxal-phosphate dependent enzyme CH48_163 IPR006059 Bacterial extracellular solute-binding protein CH48_163 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein CH48_1630 IPR036291 NAD(P)-binding domain superfamily CH48_1630 IPR014334 Ectoine utilization protein EutC CH48_1630 IPR003462 Ornithine cyclodeaminase/mu-crystallin CH48_1630 IPR023401 Ornithine cyclodeaminase, N-terminal CH48_1631 IPR006379 HAD-superfamily hydrolase, subfamily IIB CH48_1631 IPR000150 Cof family CH48_1631 IPR036412 HAD-like superfamily CH48_1631 IPR023214 HAD superfamily CH48_1632 IPR018522 DNA topoisomerase, type IIA, conserved site CH48_1632 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal CH48_1632 IPR006171 TOPRIM domain CH48_1632 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 CH48_1632 IPR002288 DNA gyrase B subunit, C-terminal CH48_1632 IPR034160 DNA gyrase subunit B, TOPRIM domain CH48_1632 IPR013760 DNA topoisomerase, type IIA-like domain superfamily CH48_1632 IPR001241 DNA topoisomerase, type IIA CH48_1632 IPR011557 DNA gyrase, subunit B CH48_1632 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CH48_1632 IPR020568 Ribosomal protein S5 domain 2-type fold CH48_1632 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH48_1632 IPR003594 Histidine kinase/HSP90-like ATPase CH48_1632 IPR041423 DNA gyrase subunit B insert domain CH48_1633 IPR001238 DNA-binding, RecF CH48_1633 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1633 IPR003395 RecF/RecN/SMC, N-terminal CH48_1633 IPR042174 DNA-binding RecF, domain 2 CH48_1633 IPR018078 DNA-binding, RecF, conserved site CH48_1634 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal CH48_1634 IPR022637 DNA polymerase III, beta sliding clamp, central CH48_1634 IPR001001 DNA polymerase III, beta sliding clamp CH48_1634 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal CH48_1635 IPR010921 Trp repressor/replication initiator CH48_1635 IPR020591 Chromosomal replication control, initiator DnaA-like CH48_1635 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1635 IPR013317 Chromosomal replication initiator protein DnaA CH48_1635 IPR003593 AAA+ ATPase domain CH48_1635 IPR038454 DnaA, N-terminal domain superfamily CH48_1635 IPR024633 DnaA N-terminal domain CH48_1635 IPR013159 Chromosomal replication initiator, DnaA C-terminal CH48_1635 IPR018312 Chromosomal replication control, initiator DnaA, conserved site CH48_1635 IPR001957 Chromosomal replication control, initiator DnaA CH48_1636 IPR000271 Ribosomal protein L34 CH48_1636 IPR020939 Ribosomal protein L34, conserved site CH48_1637 IPR000100 Ribonuclease P CH48_1637 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CH48_1637 IPR020568 Ribosomal protein S5 domain 2-type fold CH48_1637 IPR020539 Ribonuclease P, conserved site CH48_1638 IPR002696 Putative membrane protein insertion efficiency factor CH48_1639 IPR028055 Membrane insertase YidC/Oxa1, C-terminal CH48_1639 IPR028053 Membrane insertase YidC, N-terminal CH48_1639 IPR019998 Membrane insertase YidC CH48_1639 IPR038210 Membrane insertase YidC, periplasmic domain CH48_1639 IPR038221 YidC, periplasmic domain superfamily CH48_1639 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 CH48_164 IPR019660 Putative sensory transduction regulator YbjN CH48_1640 IPR005225 Small GTP-binding protein domain CH48_1640 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1640 IPR025867 MnmE, helical domain CH48_1640 IPR004520 tRNA modification GTPase MnmE CH48_1640 IPR006073 GTP binding domain CH48_1640 IPR018948 GTP-binding protein TrmE, N-terminal CH48_1640 IPR031168 TrmE-type guanine nucleotide-binding domain CH48_1640 IPR027368 tRNA modification GTPase MnmE domain 2 CH48_1640 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 CH48_1641 IPR010758 Trans-2-enoyl-CoA reductase CH48_1641 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative CH48_1641 IPR024906 Enoyl reductase FAD binding domain CH48_1643 IPR018449 NIL domain CH48_1643 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1643 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain CH48_1643 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal CH48_1643 IPR017871 ABC transporter, conserved site CH48_1643 IPR003439 ABC transporter-like CH48_1643 IPR026253 Methionine import ATP-binding protein MetN CH48_1643 IPR003593 AAA+ ATPase domain CH48_1644 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CH48_1644 IPR035906 MetI-like superfamily CH48_1645 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily CH48_1645 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CH48_1645 IPR003660 HAMP domain CH48_1645 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CH48_1645 IPR004090 Chemotaxis methyl-accepting receptor CH48_1645 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding CH48_1646 IPR029039 Flavoprotein-like superfamily CH48_1646 IPR005025 NADPH-dependent FMN reductase-like CH48_1647 IPR029151 Periplasmic sensor-like domain superfamily CH48_1647 IPR003594 Histidine kinase/HSP90-like ATPase CH48_1647 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CH48_1647 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CH48_1647 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CH48_1647 IPR005467 Histidine kinase domain CH48_1647 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH48_1648 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_1648 IPR011006 CheY-like superfamily CH48_1648 IPR001789 Signal transduction response regulator, receiver domain CH48_1648 IPR016032 Signal transduction response regulator, C-terminal effector CH48_1648 IPR000792 Transcription regulator LuxR, C-terminal CH48_165 IPR010815 Protein of unknown function DUF1418 CH48_1650 IPR006043 Xanthine/uracil/vitamin C permease CH48_1650 IPR026033 Azaguanine-like transporters CH48_1651 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CH48_1651 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CH48_1651 IPR035906 MetI-like superfamily CH48_1652 IPR023214 HAD superfamily CH48_1652 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CH48_1652 IPR041492 Haloacid dehalogenase-like hydrolase CH48_1652 IPR036412 HAD-like superfamily CH48_1652 IPR006439 HAD hydrolase, subfamily IA CH48_1653 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CH48_1653 IPR035906 MetI-like superfamily CH48_1653 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CH48_1654 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CH48_1654 IPR018313 Solute-binding protein family 3, conserved site CH48_1654 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter CH48_1654 IPR001320 Ionotropic glutamate receptor CH48_1656 IPR028366 Phosphate transport system protein PhoU CH48_1656 IPR026022 PhoU domain CH48_1656 IPR038078 PhoU-like domain superfamily CH48_1657 IPR005670 Phosphate transport system permease protein 1 CH48_1657 IPR015850 ABC transporter, phosphate import, PstB CH48_1657 IPR017871 ABC transporter, conserved site CH48_1657 IPR003593 AAA+ ATPase domain CH48_1657 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1657 IPR003439 ABC transporter-like CH48_1658 IPR005672 Phosphate transport system permease protein PstA CH48_1658 IPR035906 MetI-like superfamily CH48_1658 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CH48_1659 IPR035906 MetI-like superfamily CH48_1659 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CH48_1659 IPR011864 Phosphate ABC transporter, permease protein PstC CH48_166 IPR011902 Glutaredoxin, GrxA CH48_166 IPR014025 Glutaredoxin subgroup CH48_166 IPR036249 Thioredoxin-like superfamily CH48_166 IPR002109 Glutaredoxin CH48_166 IPR011767 Glutaredoxin active site CH48_1660 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS CH48_1660 IPR024370 PBP domain CH48_1662 IPR035490 GlmS/FrlB, SIS domain 2 CH48_1662 IPR017932 Glutamine amidotransferase type 2 domain CH48_1662 IPR035466 GlmS/AgaS, SIS domain 1 CH48_1662 IPR029055 Nucleophile aminohydrolases, N-terminal CH48_1662 IPR001347 Sugar isomerase (SIS) CH48_1662 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising CH48_1663 IPR011004 Trimeric LpxA-like superfamily CH48_1663 IPR001451 Hexapeptide repeat CH48_1663 IPR018357 Hexapeptide transferase, conserved site CH48_1663 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase CH48_1663 IPR025877 MobA-like NTP transferase CH48_1663 IPR029044 Nucleotide-diphospho-sugar transferases CH48_1663 IPR038009 GlmU, C-terminal LbH domain CH48_1664 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit CH48_1664 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain CH48_1664 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily CH48_1664 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal CH48_1664 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal CH48_1665 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily CH48_1665 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CH48_1665 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site CH48_1665 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1665 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain CH48_1665 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal CH48_1665 IPR005722 ATP synthase, F1 complex, beta subunit CH48_1665 IPR003593 AAA+ ATPase domain CH48_1666 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site CH48_1666 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily CH48_1666 IPR000131 ATP synthase, F1 complex, gamma subunit CH48_1667 IPR000793 ATP synthase, alpha subunit, C-terminal CH48_1667 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site CH48_1667 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain CH48_1667 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily CH48_1667 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CH48_1667 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1667 IPR005294 ATP synthase, F1 complex, alpha subunit CH48_1667 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain CH48_1667 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily CH48_1667 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily CH48_1668 IPR020781 ATPase, OSCP/delta subunit, conserved site CH48_1668 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily CH48_1668 IPR000711 ATPase, OSCP/delta subunit CH48_1669 IPR005864 ATP synthase, F0 complex, subunit b, bacterial CH48_1669 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast CH48_1669 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily CH48_167 IPR006037 Regulator of K+ conductance, C-terminal CH48_167 IPR006512 YidE/YbjL duplication CH48_167 IPR023017 Transport protein YbjL, putative CH48_167 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily CH48_1670 IPR002379 V-ATPase proteolipid subunit C-like domain CH48_1670 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site CH48_1670 IPR000454 ATP synthase, F0 complex, subunit C CH48_1670 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast CH48_1670 IPR035921 F/V-ATP synthase subunit C superfamily CH48_1670 IPR038662 F1F0 ATP synthase subunit C superfamily CH48_1671 IPR035908 ATP synthase, F0 complex, subunit A superfamily CH48_1671 IPR000568 ATP synthase, F0 complex, subunit A CH48_1671 IPR023011 ATP synthase, F0 complex, subunit A, active site CH48_1672 IPR005598 ATP synthase protein I CH48_1673 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH48_1673 IPR003682 rRNA small subunit methyltransferase G CH48_1674 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related CH48_1674 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG CH48_1674 IPR036188 FAD/NAD(P)-binding domain superfamily CH48_1674 IPR020595 MnmG-related, conserved site CH48_1674 IPR026904 GidA associated domain 3 CH48_1675 IPR029039 Flavoprotein-like superfamily CH48_1675 IPR008254 Flavodoxin/nitric oxide synthase CH48_1676 IPR019888 Transcription regulator AsnC-type CH48_1676 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CH48_1676 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CH48_1676 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_1676 IPR036390 Winged helix DNA-binding domain superfamily CH48_1676 IPR000485 AsnC-type HTH domain CH48_1676 IPR011008 Dimeric alpha-beta barrel CH48_1676 IPR011991 ArsR-like helix-turn-helix domain CH48_1677 IPR006195 Aminoacyl-tRNA synthetase, class II CH48_1677 IPR004618 Aspartate--ammonia ligase CH48_1679 IPR036465 von Willebrand factor A-like domain superfamily CH48_1679 IPR008912 Uncharacterised protein family CoxE-like CH48_1679 IPR023481 Uncharacterised protein family ViaA CH48_1679 IPR002035 von Willebrand factor, type A CH48_1680 IPR023671 ATPase RavA CH48_1680 IPR003593 AAA+ ATPase domain CH48_1680 IPR011704 ATPase, dynein-related, AAA domain CH48_1680 IPR041538 ATPase RavA-like, AAA lid domain CH48_1680 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1680 IPR022547 ATPase, RavA, C-terminal CH48_1681 IPR003855 Potassium transporter CH48_1681 IPR023051 Potassium uptake protein, low affinity, Kup CH48_1682 IPR023064 D-ribose pyranase CH48_1682 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU CH48_1682 IPR023750 RbsD-like superfamily CH48_1683 IPR003439 ABC transporter-like CH48_1683 IPR003593 AAA+ ATPase domain CH48_1683 IPR017871 ABC transporter, conserved site CH48_1683 IPR015861 ABC transporter, ribose import, RbsA CH48_1683 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1684 IPR001851 ABC transporter, permease CH48_1685 IPR028082 Periplasmic binding protein-like I CH48_1685 IPR025997 Periplasmic binding protein CH48_1686 IPR011611 Carbohydrate kinase PfkB CH48_1686 IPR002139 Ribokinase/fructokinase CH48_1686 IPR029056 Ribokinase-like CH48_1686 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CH48_1686 IPR011877 Ribokinase CH48_1688 IPR000843 LacI-type HTH domain CH48_1688 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CH48_1688 IPR028082 Periplasmic binding protein-like I CH48_169 IPR033879 Undecaprenyl-diphosphatase CH48_169 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CH48_169 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily CH48_1690 IPR011711 GntR, C-terminal CH48_1690 IPR000524 Transcription regulator HTH, GntR CH48_1690 IPR008920 Transcription regulator FadR/GntR, C-terminal CH48_1690 IPR036390 Winged helix DNA-binding domain superfamily CH48_1690 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_1697 IPR025948 HTH-like domain CH48_1697 IPR001584 Integrase, catalytic core CH48_1697 IPR012337 Ribonuclease H-like superfamily CH48_1697 IPR036397 Ribonuclease H superfamily CH48_1698 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain CH48_1698 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1699 IPR029044 Nucleotide-diphospho-sugar transferases CH48_1699 IPR025877 MobA-like NTP transferase CH48_1699 IPR013482 Molybdenum cofactor guanylyltransferase CH48_17 IPR006076 FAD dependent oxidoreductase CH48_17 IPR023493 N-methyl-L-tryptophan oxidase MTOX CH48_17 IPR036188 FAD/NAD(P)-binding domain superfamily CH48_170 IPR028581 Deoxyribose-phosphate aldolase type I CH48_170 IPR002915 DeoC/FbaB/ lacD aldolase CH48_170 IPR011343 Deoxyribose-phosphate aldolase CH48_170 IPR013785 Aldolase-type TIM barrel CH48_1700 IPR038134 YihD-like superfamily CH48_1700 IPR009383 Protein of unknown function DUF1040 CH48_1701 IPR032882 SrkA/RdoA protein kinase CH48_1701 IPR011009 Protein kinase-like domain superfamily CH48_1701 IPR002575 Aminoglycoside phosphotransferase CH48_1702 IPR001853 DSBA-like thioredoxin domain CH48_1702 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL CH48_1702 IPR036249 Thioredoxin-like superfamily CH48_1702 IPR017937 Thioredoxin, conserved site CH48_1702 IPR013766 Thioredoxin domain CH48_1703 IPR018320 DNA polymerase 1 CH48_1703 IPR029060 PIN-like domain superfamily CH48_1703 IPR002298 DNA polymerase A CH48_1703 IPR001098 DNA-directed DNA polymerase, family A, palm domain CH48_1703 IPR019760 DNA-directed DNA polymerase, family A, conserved site CH48_1703 IPR036279 5'-3' exonuclease, C-terminal domain superfamily CH48_1703 IPR002421 5'-3' exonuclease, N-terminal CH48_1703 IPR012337 Ribonuclease H-like superfamily CH48_1703 IPR008918 Helix-hairpin-helix motif, class 2 CH48_1703 IPR002562 3'-5' exonuclease domain CH48_1703 IPR036397 Ribonuclease H superfamily CH48_1703 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal CH48_1703 IPR020045 DNA polymerase I-like, H3TH domain CH48_1704 IPR030393 EngB-type guanine nucleotide-binding (G) domain CH48_1704 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC CH48_1704 IPR006073 GTP binding domain CH48_1704 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1705 IPR007336 Der GTPase activator CH48_1706 IPR023404 Radical SAM, alpha/beta horseshoe CH48_1706 IPR010723 HemN, C-terminal CH48_1706 IPR006638 Elp3/MiaB/NifB CH48_1706 IPR034505 Anaerobic coproporphyrinogen-III oxidase CH48_1706 IPR007197 Radical SAM CH48_1706 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN CH48_1707 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CH48_1707 IPR002078 RNA polymerase sigma factor 54 interaction domain CH48_1707 IPR010114 DNA-binding transcriptional regulator NtrC CH48_1707 IPR025944 Sigma-54 interaction domain, conserved site CH48_1707 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1707 IPR002197 DNA binding HTH domain, Fis-type CH48_1707 IPR009057 Homeobox-like domain superfamily CH48_1707 IPR011006 CheY-like superfamily CH48_1707 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CH48_1707 IPR003593 AAA+ ATPase domain CH48_1707 IPR001789 Signal transduction response regulator, receiver domain CH48_1708 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CH48_1708 IPR013767 PAS fold CH48_1708 IPR000014 PAS domain CH48_1708 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CH48_1708 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CH48_1708 IPR005467 Histidine kinase domain CH48_1708 IPR035965 PAS domain superfamily CH48_1708 IPR003594 Histidine kinase/HSP90-like ATPase CH48_1708 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH48_171 IPR037171 NagB/RpiA transferase-like CH48_171 IPR014036 DeoR C-terminal sensor domain CH48_171 IPR001034 DeoR-type HTH domain CH48_171 IPR018356 Transcription regulator, HTH DeoR-type, conserved site CH48_1710 IPR027302 Glutamine synthetase, N-terminal conserved site CH48_1710 IPR001637 Glutamine synthetase class-I, adenylation site CH48_1710 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain CH48_1710 IPR008146 Glutamine synthetase, catalytic domain CH48_1710 IPR027303 Glutamine synthetase, glycine-rich site CH48_1710 IPR004809 Glutamine synthetase type I CH48_1710 IPR036651 Glutamine synthetase, N-terminal domain superfamily CH48_1710 IPR008147 Glutamine synthetase, beta-Grasp domain CH48_1712 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CH48_1712 IPR023214 HAD superfamily CH48_1712 IPR041492 Haloacid dehalogenase-like hydrolase CH48_1712 IPR006439 HAD hydrolase, subfamily IA CH48_1712 IPR036412 HAD-like superfamily CH48_1713 IPR017039 Virulence factor BrkB CH48_1713 IPR023679 Uncharacterised protein family UPF0761, bacterial CH48_1714 IPR003732 D-aminoacyl-tRNA deacylase DTD CH48_1714 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily CH48_1715 IPR029069 HotDog domain superfamily CH48_1715 IPR000182 GNAT domain CH48_1715 IPR016181 Acyl-CoA N-acyltransferase CH48_1715 IPR012660 Thioesterase, putative CH48_1716 IPR038722 Ner, winged helix-turn-helix DNA-binding domain CH48_1716 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CH48_1719 IPR007844 AsmA CH48_172 IPR004694 Hydroxy amino acid transporter CH48_1721 IPR006042 Xanthine/uracil permease CH48_1721 IPR006043 Xanthine/uracil/vitamin C permease CH48_1722 IPR004445 Sodium/glutamate symport carrier protein GltS CH48_1724 IPR004609 ATP-dependent DNA helicase RecG CH48_1724 IPR014001 Helicase superfamily 1/2, ATP-binding domain CH48_1724 IPR011545 DEAD/DEAH box helicase domain CH48_1724 IPR033454 RecG, wedge domain CH48_1724 IPR001650 Helicase, C-terminal CH48_1724 IPR012340 Nucleic acid-binding, OB-fold CH48_1724 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1725 IPR001537 tRNA/rRNA methyltransferase, SpoU type CH48_1725 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal CH48_1725 IPR029028 Alpha/beta knot methyltransferases CH48_1725 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CH48_1725 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase CH48_1726 IPR004811 RelA/SpoT family CH48_1726 IPR004095 TGS CH48_1726 IPR002912 ACT domain CH48_1726 IPR033655 RelA, TGS domain CH48_1726 IPR003607 HD/PDEase domain CH48_1726 IPR012675 Beta-grasp domain superfamily CH48_1726 IPR007685 RelA/SpoT CH48_1726 IPR012676 TGS-like CH48_1727 IPR036161 RPB6/omega subunit-like superfamily CH48_1727 IPR012293 RNA polymerase subunit, RPB6/omega CH48_1727 IPR006110 RNA polymerase, subunit omega/K/RPB6 CH48_1727 IPR003716 DNA-directed RNA polymerase, omega subunit CH48_1728 IPR008144 Guanylate kinase-like domain CH48_1728 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CH48_1728 IPR017665 Guanylate kinase CH48_1728 IPR020590 Guanylate kinase, conserved site CH48_1728 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_173 IPR029009 Allosteric substrate binding domain superfamily CH48_173 IPR005131 Serine dehydratase beta chain CH48_173 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form CH48_173 IPR005130 Serine dehydratase-like, alpha subunit CH48_1731 IPR005115 Uncharacterised domain UPF0126 CH48_1733 IPR008276 Concentrative nucleoside transporter CH48_1733 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial CH48_1733 IPR011657 Concentrative nucleoside transporter C-terminal domain CH48_1733 IPR002668 Concentrative nucleoside transporter N-terminal domain CH48_1733 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain CH48_1734 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CH48_1734 IPR001753 Enoyl-CoA hydratase/isomerase CH48_1734 IPR029045 ClpP/crotonase-like domain superfamily CH48_1734 IPR014748 Enoyl-CoA hydratase, C-terminal CH48_1735 IPR035965 PAS domain superfamily CH48_1735 IPR001633 EAL domain CH48_1735 IPR035919 EAL domain superfamily CH48_1735 IPR000160 GGDEF domain CH48_1735 IPR029787 Nucleotide cyclase CH48_1735 IPR000014 PAS domain CH48_1738 IPR013527 YicC-like, N-terminal CH48_1738 IPR005229 Conserved hypothetical protein CHP00255 CH48_1738 IPR013551 Domain of unknown function DUF1732 CH48_1739 IPR027408 PNPase/RNase PH domain superfamily CH48_1739 IPR020568 Ribosomal protein S5 domain 2-type fold CH48_1739 IPR036345 Exoribonuclease, PH domain 2 superfamily CH48_1739 IPR002381 Ribonuclease PH, bacterial-type CH48_1739 IPR015847 Exoribonuclease, phosphorolytic domain 2 CH48_1739 IPR001247 Exoribonuclease, phosphorolytic domain 1 CH48_1739 IPR018336 Ribonuclease PH, conserved site CH48_1740 IPR000836 Phosphoribosyltransferase domain CH48_1740 IPR004467 Orotate phosphoribosyl transferase domain CH48_1740 IPR029057 Phosphoribosyltransferase-like CH48_1740 IPR023031 Orotate phosphoribosyltransferase CH48_1741 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CH48_1741 IPR023769 Nucleoid occlusion factor SlmA CH48_1741 IPR001647 DNA-binding HTH domain, TetR-type CH48_1741 IPR009057 Homeobox-like domain superfamily CH48_1741 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CH48_1742 IPR033704 dUTPase, trimeric CH48_1742 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase CH48_1742 IPR029054 dUTPase-like CH48_1742 IPR036157 dUTPase-like superfamily CH48_1743 IPR003382 Flavoprotein CH48_1743 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC CH48_1743 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal CH48_1743 IPR036551 Flavin prenyltransferase-like CH48_1743 IPR035929 CoaB-like superfamily CH48_1744 IPR022820 Uncharacterised protein family UPF0758, YicR subfamily CH48_1744 IPR020891 Uncharacterised protein family UPF0758, conserved site CH48_1744 IPR001405 Uncharacterised protein family UPF0758 CH48_1744 IPR010994 RuvA domain 2-like CH48_1744 IPR037518 MPN domain CH48_1744 IPR025657 RadC-like JAB domain CH48_1745 IPR034704 L28p-like CH48_1745 IPR026569 Ribosomal protein L28/L24 CH48_1745 IPR037147 Ribosomal protein L28/L24 superfamily CH48_1745 IPR001383 Ribosomal protein L28 CH48_1746 IPR038584 Ribosomal protein L33 superfamily CH48_1746 IPR001705 Ribosomal protein L33 CH48_1746 IPR018264 Ribosomal protein L33, conserved site CH48_1746 IPR011332 Zinc-binding ribosomal protein CH48_1747 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type CH48_1747 IPR010979 Ribosomal protein S13-like, H2TH CH48_1747 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain CH48_1747 IPR020629 Formamidopyrimidine-DNA glycosylase CH48_1747 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site CH48_1747 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding CH48_1747 IPR010663 Zinc finger, FPG/IleRS-type CH48_1747 IPR035937 MutM-like, N-terminal CH48_1748 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH48_1748 IPR001980 Phosphopantetheine adenylyltransferase CH48_1748 IPR004821 Cytidyltransferase-like domain CH48_1749 IPR001173 Glycosyltransferase 2-like CH48_1749 IPR029044 Nucleotide-diphospho-sugar transferases CH48_1750 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal CH48_1750 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily CH48_1750 IPR039901 3-deoxy-D-manno-octulosonic acid transferase CH48_1751 IPR002201 Glycosyl transferase, family 9 CH48_1751 IPR011908 Lipopolysaccharide heptosyltransferase I CH48_1752 IPR002201 Glycosyl transferase, family 9 CH48_1752 IPR011910 ADP-heptose--LPS heptosyltransferase 2 CH48_1753 IPR036291 NAD(P)-binding domain superfamily CH48_1753 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase CH48_1753 IPR001509 NAD-dependent epimerase/dehydratase CH48_1754 IPR004839 Aminotransferase, class I/classII CH48_1754 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site CH48_1754 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CH48_1754 IPR015424 Pyridoxal phosphate-dependent transferase CH48_1754 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase CH48_1754 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CH48_1755 IPR013149 Alcohol dehydrogenase, C-terminal CH48_1755 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CH48_1755 IPR036291 NAD(P)-binding domain superfamily CH48_1755 IPR011032 GroES-like superfamily CH48_1755 IPR020843 Polyketide synthase, enoylreductase domain CH48_1755 IPR013154 Alcohol dehydrogenase, N-terminal CH48_1755 IPR004627 L-threonine 3-dehydrogenase CH48_1758 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CH48_1758 IPR006837 Divergent polysaccharide deacetylase CH48_1759 IPR016047 Peptidase M23 CH48_1759 IPR011055 Duplicated hybrid motif CH48_176 IPR012338 Beta-lactamase/transpeptidase-like CH48_176 IPR015956 Penicillin-binding protein, C-terminal domain superfamily CH48_176 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A CH48_176 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal CH48_176 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal CH48_176 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily CH48_1760 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent CH48_1760 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily CH48_1760 IPR006124 Metalloenzyme CH48_1760 IPR011258 BPG-independent PGAM, N-terminal CH48_1760 IPR017850 Alkaline-phosphatase-like, core domain superfamily CH48_1761 IPR036873 Rhodanese-like domain superfamily CH48_1761 IPR001763 Rhodanese-like domain CH48_1762 IPR036249 Thioredoxin-like superfamily CH48_1762 IPR011900 Glutaredoxin, GrxC CH48_1762 IPR014025 Glutaredoxin subgroup CH48_1762 IPR002109 Glutaredoxin CH48_1762 IPR011767 Glutaredoxin active site CH48_1763 IPR035958 SecB-like superfamily CH48_1763 IPR003708 Bacterial protein export chaperone SecB CH48_1764 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal CH48_1764 IPR036291 NAD(P)-binding domain superfamily CH48_1764 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent CH48_1764 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal CH48_1764 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CH48_1764 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CH48_1765 IPR011004 Trimeric LpxA-like superfamily CH48_1765 IPR001451 Hexapeptide repeat CH48_1765 IPR018357 Hexapeptide transferase, conserved site CH48_1765 IPR005881 Serine O-acetyltransferase CH48_1765 IPR042122 Serine acetyltransferase, N-terminal domain superfamily CH48_1765 IPR010493 Serine acetyltransferase, N-terminal CH48_1766 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CH48_1766 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase CH48_1766 IPR001537 tRNA/rRNA methyltransferase, SpoU type CH48_1766 IPR029028 Alpha/beta knot methyltransferases CH48_1767 IPR018060 DNA binding HTH domain, AraC-type CH48_1767 IPR018062 HTH domain AraC-type, conserved site CH48_1767 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily CH48_1767 IPR035451 Ada-like domain superfamily CH48_1767 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain CH48_1767 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_1767 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site CH48_1767 IPR004026 Ada DNA repair, metal-binding CH48_1767 IPR009057 Homeobox-like domain superfamily CH48_1767 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain CH48_1767 IPR016221 Bifunctional regulatory protein Ada CH48_1767 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding CH48_1768 IPR005467 Histidine kinase domain CH48_1768 IPR032404 Two-component sensor protein CpxA, periplasmic domain CH48_1768 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CH48_1768 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CH48_1768 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CH48_1768 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH48_1768 IPR003594 Histidine kinase/HSP90-like ATPase CH48_1768 IPR003660 HAMP domain CH48_1768 IPR038515 CpxA, periplasmic domain superfamily CH48_1769 IPR039420 Transcriptional regulatory protein WalR-like CH48_1769 IPR001867 OmpR/PhoB-type DNA-binding domain CH48_1769 IPR011006 CheY-like superfamily CH48_1769 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_1769 IPR001789 Signal transduction response regulator, receiver domain CH48_177 IPR005857 Cystathionine beta-synthase CH48_177 IPR001926 Pyridoxal-phosphate dependent enzyme CH48_177 IPR000644 CBS domain CH48_177 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CH48_1770 IPR012899 LTXXQ motif family protein CH48_1771 IPR023783 Cation efflux pump FieF CH48_1771 IPR002524 Cation efflux protein CH48_1771 IPR027469 Cation efflux transmembrane domain superfamily CH48_1771 IPR036837 Cation efflux protein, cytoplasmic domain superfamily CH48_1771 IPR027470 Cation efflux protein, cytoplasmic domain CH48_1772 IPR035966 Phosphofructokinase superfamily CH48_1772 IPR000023 Phosphofructokinase domain CH48_1772 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic CH48_1772 IPR015912 Phosphofructokinase, conserved site CH48_1772 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type CH48_1772 IPR022953 ATP-dependent 6-phosphofructokinase CH48_1773 IPR005669 Thiosulphate/Sulfate-binding protein CH48_1773 IPR034408 Sulphate/thiosulphate-binding site CH48_1773 IPR000957 Sulphate/thiosulphate-binding, conserved site CH48_1775 IPR000652 Triosephosphate isomerase CH48_1775 IPR020861 Triosephosphate isomerase, active site CH48_1775 IPR035990 Triosephosphate isomerase superfamily CH48_1775 IPR013785 Aldolase-type TIM barrel CH48_1775 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic CH48_1776 IPR009918 Protein of unknown function DUF1454 CH48_1777 IPR008523 Protein of unknown function DUF805 CH48_1778 IPR017938 Riboflavin synthase-like beta-barrel CH48_1778 IPR033892 Ferredoxin--NADP reductase, bacteria CH48_1778 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CH48_1778 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain CH48_1778 IPR017927 FAD-binding domain, ferredoxin reductase-type CH48_1778 IPR001433 Oxidoreductase FAD/NAD(P)-binding CH48_178 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CH48_178 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CH48_178 IPR015424 Pyridoxal phosphate-dependent transferase CH48_178 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme CH48_1781 IPR011701 Major facilitator superfamily CH48_1781 IPR036259 MFS transporter superfamily CH48_1781 IPR004734 Multidrug resistance protein CH48_1781 IPR020846 Major facilitator superfamily domain CH48_1782 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase CH48_1783 IPR018484 Carbohydrate kinase, FGGY, N-terminal CH48_1783 IPR005999 Glycerol kinase CH48_1783 IPR000577 Carbohydrate kinase, FGGY CH48_1783 IPR018485 Carbohydrate kinase, FGGY, C-terminal CH48_1783 IPR018483 Carbohydrate kinase, FGGY, conserved site CH48_1784 IPR000425 Major intrinsic protein CH48_1784 IPR023271 Aquaporin-like CH48_1784 IPR022357 Major intrinsic protein, conserved site CH48_1785 IPR009252 Cell division protein ZapB CH48_1786 IPR010203 Regulator of ribonuclease activity A CH48_1786 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily CH48_1786 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria CH48_1786 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein CH48_1787 IPR000537 UbiA prenyltransferase family CH48_1787 IPR026046 UbiA prenyltransferase domain containing protein 1 CH48_1787 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase CH48_1788 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1788 IPR003593 AAA+ ATPase domain CH48_1788 IPR003959 ATPase, AAA-type, core CH48_1788 IPR004491 Heat shock protein HslU CH48_1788 IPR019489 Clp ATPase, C-terminal CH48_1789 IPR001353 Proteasome, subunit alpha/beta CH48_1789 IPR022281 ATP-dependent protease, HslV subunit CH48_1789 IPR029055 Nucleophile aminohydrolases, N-terminal CH48_1789 IPR023333 Proteasome B-type subunit CH48_179 IPR035906 MetI-like superfamily CH48_179 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CH48_1790 IPR007730 Sporulation-like domain CH48_1790 IPR036680 Sporulation-like domain superfamily CH48_1790 IPR011930 Cell division protein FtsN CH48_1791 IPR028082 Periplasmic binding protein-like I CH48_1791 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CH48_1791 IPR000843 LacI-type HTH domain CH48_1792 IPR041236 Primosomal protein N, C-terminal domain CH48_1792 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily CH48_1792 IPR011545 DEAD/DEAH box helicase domain CH48_1792 IPR014001 Helicase superfamily 1/2, ATP-binding domain CH48_1792 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1792 IPR005259 Primosomal protein N' CH48_1792 IPR041222 Primosomal protein N', 3' DNA-binding domain CH48_1792 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain CH48_1792 IPR001650 Helicase, C-terminal CH48_1793 IPR042105 Ribosomal protein L31 superfamily CH48_1793 IPR027491 Ribosomal protein L31 type A CH48_1793 IPR002150 Ribosomal protein L31 CH48_1793 IPR034704 L28p-like CH48_1794 IPR023453 Methionine repressor MetJ domain superfamily CH48_1794 IPR010985 Ribbon-helix-helix CH48_1794 IPR002084 Methionine repressor MetJ CH48_1795 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CH48_1795 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CH48_1795 IPR015424 Pyridoxal phosphate-dependent transferase CH48_1795 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme CH48_1795 IPR011821 O-succinylhomoserine (thiol)-lyase CH48_1796 IPR036291 NAD(P)-binding domain superfamily CH48_1796 IPR019811 Homoserine dehydrogenase, conserved site CH48_1796 IPR001342 Homoserine dehydrogenase, catalytic CH48_1796 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I CH48_1796 IPR018042 Aspartate kinase, conserved site CH48_1796 IPR001341 Aspartate kinase CH48_1796 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding CH48_1796 IPR001048 Aspartate/glutamate/uridylate kinase CH48_1796 IPR041743 Bifunctional aspartokinase/homoserine dehydrogenase, N-terminal catalytic domain CH48_1796 IPR036393 Acetylglutamate kinase-like superfamily CH48_1797 IPR004620 5,10-methylenetetrahydrofolate reductase CH48_1797 IPR003171 Methylenetetrahydrofolate reductase CH48_1797 IPR029041 FAD-linked oxidoreductase-like CH48_1798 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type CH48_1798 IPR033129 Phosphoenolpyruvate carboxylase, His active site CH48_1798 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CH48_1798 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site CH48_1798 IPR021135 Phosphoenolpyruvate carboxylase CH48_1799 IPR036264 Bacterial exopeptidase dimerisation domain CH48_1799 IPR002933 Peptidase M20 CH48_1799 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site CH48_1799 IPR010169 Acetylornithine deacetylase ArgE CH48_1799 IPR011650 Peptidase M20, dimerisation domain CH48_18 IPR001789 Signal transduction response regulator, receiver domain CH48_18 IPR000792 Transcription regulator LuxR, C-terminal CH48_18 IPR016032 Signal transduction response regulator, C-terminal effector CH48_180 IPR003593 AAA+ ATPase domain CH48_180 IPR026253 Methionine import ATP-binding protein MetN CH48_180 IPR018449 NIL domain CH48_180 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain CH48_180 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_180 IPR003439 ABC transporter-like CH48_180 IPR017871 ABC transporter, conserved site CH48_180 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal CH48_1800 IPR000534 Semialdehyde dehydrogenase, NAD-binding CH48_1800 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 CH48_1800 IPR036291 NAD(P)-binding domain superfamily CH48_1800 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site CH48_1800 IPR012280 Semialdehyde dehydrogenase, dimerisation domain CH48_1801 IPR001048 Aspartate/glutamate/uridylate kinase CH48_1801 IPR041731 N-Acetyl-L-glutamate kinase, noncyclic CH48_1801 IPR037528 Acetylglutamate kinase ArgB CH48_1801 IPR036393 Acetylglutamate kinase-like superfamily CH48_1801 IPR004662 Acetylglutamate kinase family CH48_1802 IPR008948 L-Aspartase-like CH48_1802 IPR020557 Fumarate lyase, conserved site CH48_1802 IPR009049 Argininosuccinate lyase CH48_1802 IPR000362 Fumarate lyase family CH48_1802 IPR022761 Fumarate lyase, N-terminal CH48_1802 IPR029419 Argininosuccinate lyase, C-terminal CH48_1802 IPR024083 Fumarase/histidase, N-terminal CH48_1803 IPR039426 Vitamin B12 transporter BtuB-like CH48_1803 IPR012910 TonB-dependent receptor, plug domain CH48_1803 IPR037066 TonB-dependent receptor, plug domain superfamily CH48_1803 IPR000531 TonB-dependent receptor-like, beta-barrel CH48_1803 IPR011276 TonB-dependent haem/haemoglobin receptor CH48_1803 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor CH48_1803 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CH48_1807 IPR010128 ATPase, type I secretion system, PrtD CH48_1807 IPR003593 AAA+ ATPase domain CH48_1807 IPR011527 ABC transporter type 1, transmembrane domain CH48_1807 IPR036640 ABC transporter type 1, transmembrane domain superfamily CH48_1807 IPR003439 ABC transporter-like CH48_1807 IPR017871 ABC transporter, conserved site CH48_1807 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1808 IPR010129 Type I secretion membrane fusion protein, HlyD family CH48_1808 IPR006144 Secretion protein HlyD, conserved site CH48_181 IPR004872 Lipoprotein NlpA family CH48_1810 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I CH48_1810 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CH48_1810 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily CH48_1810 IPR023753 FAD/NAD(P)-binding domain CH48_1810 IPR036188 FAD/NAD(P)-binding domain superfamily CH48_1810 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site CH48_1810 IPR006258 Dihydrolipoamide dehydrogenase CH48_1811 IPR011906 Glutaredoxin domain CH48_1811 IPR014025 Glutaredoxin subgroup CH48_1811 IPR013740 Redoxin CH48_1811 IPR036249 Thioredoxin-like superfamily CH48_1811 IPR037944 Peroxiredoxin-5-like CH48_1811 IPR002109 Glutaredoxin CH48_1811 IPR011767 Glutaredoxin active site CH48_1812 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CH48_1812 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I CH48_1812 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily CH48_1812 IPR023753 FAD/NAD(P)-binding domain CH48_1812 IPR022962 Soluble pyridine nucleotide transhydrogenase CH48_1812 IPR036188 FAD/NAD(P)-binding domain superfamily CH48_1813 IPR005119 LysR, substrate-binding CH48_1813 IPR000847 Transcription regulator HTH, LysR CH48_1813 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_1813 IPR036390 Winged helix DNA-binding domain superfamily CH48_1814 IPR023764 Transcriptional repressor HTH, FabR CH48_1814 IPR009057 Homeobox-like domain superfamily CH48_1814 IPR001647 DNA-binding HTH domain, TetR-type CH48_1815 IPR009867 Protein of unknown function DUF1422 CH48_1817 IPR010280 (Uracil-5)-methyltransferase family CH48_1817 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH48_1817 IPR030390 RNA methyltransferase TrmA, active site CH48_1817 IPR030391 RNA methyltransferase TrmA, conserved site CH48_1817 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA CH48_1818 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CH48_1818 IPR010917 TonB-dependent receptor, conserved site CH48_1818 IPR012910 TonB-dependent receptor, plug domain CH48_1818 IPR039426 Vitamin B12 transporter BtuB-like CH48_1818 IPR010101 TonB-dependent vitamin B12 transporter BtuB CH48_1818 IPR000531 TonB-dependent receptor-like, beta-barrel CH48_1818 IPR037066 TonB-dependent receptor, plug domain superfamily CH48_1819 IPR015942 Asp/Glu/hydantoin racemase CH48_1819 IPR004391 Glutamate racemase CH48_1819 IPR033134 Asp/Glu racemase, active site 2 CH48_1819 IPR018187 Asp/Glu racemase, active site 1 CH48_1819 IPR001920 Asp/Glu racemase CH48_1828 IPR025997 Periplasmic binding protein CH48_1828 IPR028082 Periplasmic binding protein-like I CH48_1828 IPR033893 ABC transporter periplasmic-binding protein YtfQ CH48_1829 IPR003593 AAA+ ATPase domain CH48_1829 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1829 IPR017871 ABC transporter, conserved site CH48_1829 IPR003439 ABC transporter-like CH48_1830 IPR001851 ABC transporter, permease CH48_1831 IPR005119 LysR, substrate-binding CH48_1831 IPR020890 Transcription regulator HTH, HdfR CH48_1831 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_1831 IPR000847 Transcription regulator HTH, LysR CH48_1831 IPR036390 Winged helix DNA-binding domain superfamily CH48_1832 IPR001851 ABC transporter, permease CH48_1833 IPR007335 Protein of unknown function DUF413 CH48_1834 IPR003593 AAA+ ATPase domain CH48_1834 IPR004482 Mg chelatase-related protein CH48_1834 IPR025158 Mg chelatase-related protein, C-terminal domain CH48_1834 IPR000523 Magnesium chelatase ChlI domain CH48_1834 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1834 IPR020568 Ribosomal protein S5 domain 2-type fold CH48_1834 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CH48_1835 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CH48_1835 IPR000399 TPP-binding enzyme, conserved site CH48_1835 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CH48_1835 IPR012000 Thiamine pyrophosphate enzyme, central domain CH48_1835 IPR012846 Acetolactate synthase, large subunit, biosynthetic CH48_1835 IPR039368 Acetolactate synthase large subunit, TPP binding domain CH48_1835 IPR029035 DHS-like NAD/FAD-binding domain superfamily CH48_1835 IPR029061 Thiamin diphosphate-binding fold CH48_1836 IPR002912 ACT domain CH48_1837 IPR001544 Aminotransferase class IV CH48_1837 IPR033939 Branched-chain aminotransferase CH48_1837 IPR005785 Branched-chain amino acid aminotransferase I CH48_1837 IPR036038 Aminotransferase-like, PLP-dependent enzymes CH48_1837 IPR018300 Aminotransferase, class IV, conserved site CH48_1838 IPR042096 Dihydroxy-acid dehydratase, C-terminal CH48_1838 IPR004404 Dihydroxy-acid dehydratase CH48_1838 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase CH48_1838 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site CH48_1838 IPR037237 IlvD/EDD, N-terminal domain CH48_1839 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CH48_1839 IPR005787 Threonine dehydratase, biosynthetic CH48_1839 IPR001721 Threonine dehydratase, ACT-like domain CH48_1839 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site CH48_1839 IPR001926 Pyridoxal-phosphate dependent enzyme CH48_1839 IPR038110 Threonine dehydratase, ACT-like domain superfamily CH48_184 IPR036412 HAD-like superfamily CH48_184 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like CH48_184 IPR023214 HAD superfamily CH48_1842 IPR036390 Winged helix DNA-binding domain superfamily CH48_1842 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_1842 IPR000847 Transcription regulator HTH, LysR CH48_1842 IPR037404 HTH-type transcriptional activator IlvY, PBP2 domain CH48_1842 IPR005119 LysR, substrate-binding CH48_1844 IPR000506 Ketol-acid reductoisomerase, C-terminal CH48_1844 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CH48_1844 IPR013116 Ketol-acid reductoisomerase, N-terminal CH48_1844 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CH48_1844 IPR013023 Ketol-acid reductoisomerase CH48_1844 IPR036291 NAD(P)-binding domain superfamily CH48_1845 IPR037146 Colicin/pyocin, DNase domain superfamily CH48_1845 IPR003615 HNH nuclease CH48_1845 IPR003060 Pyocin S killer protein CH48_1845 IPR016128 Pyosin/cloacin translocation domain CH48_1845 IPR036302 Pyosin/cloacin translocation domain superfamily CH48_1846 IPR000290 Colicin immunity protein/pyocin immunity protein CH48_1846 IPR035900 Colicin E immunity protein superfamily CH48_1847 IPR000290 Colicin immunity protein/pyocin immunity protein CH48_1847 IPR035900 Colicin E immunity protein superfamily CH48_1849 IPR016147 Pili assembly chaperone, N-terminal CH48_1849 IPR018046 Pili assembly chaperone, conserved site CH48_1849 IPR016148 Pili assembly chaperone, C-terminal CH48_1849 IPR001829 Pili assembly chaperone, bacterial CH48_1849 IPR036316 Pili assembly chaperone, C-terminal domain superfamily CH48_1849 IPR013783 Immunoglobulin-like fold CH48_1849 IPR008962 PapD-like superfamily CH48_185 IPR004045 Glutathione S-transferase, N-terminal CH48_185 IPR004046 Glutathione S-transferase, C-terminal CH48_185 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CH48_185 IPR010987 Glutathione S-transferase, C-terminal-like CH48_185 IPR036249 Thioredoxin-like superfamily CH48_1851 IPR037224 PapC, N-terminal domain superfamily CH48_1851 IPR000015 Outer membrane usher protein CH48_1851 IPR018030 Fimbrial membrane usher, conserved site CH48_1851 IPR025949 PapC-like, C-terminal domain CH48_1851 IPR025885 PapC, N-terminal domain CH48_1851 IPR042186 Outer membrane usher protein FimD, plug domain CH48_1852 IPR008962 PapD-like superfamily CH48_1852 IPR016147 Pili assembly chaperone, N-terminal CH48_1852 IPR018046 Pili assembly chaperone, conserved site CH48_1852 IPR001829 Pili assembly chaperone, bacterial CH48_1852 IPR013783 Immunoglobulin-like fold CH48_1852 IPR036316 Pili assembly chaperone, C-terminal domain superfamily CH48_1852 IPR016148 Pili assembly chaperone, C-terminal CH48_1854 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type CH48_1854 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site CH48_1855 IPR014016 UvrD-like helicase, ATP-binding domain CH48_1855 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1855 IPR005752 ATP-dependent DNA helicase Rep CH48_1855 IPR000212 DNA helicase, UvrD/REP type CH48_1855 IPR014017 UvrD-like DNA helicase, C-terminal CH48_1855 IPR013986 DExx box DNA helicase domain superfamily CH48_1855 IPR034739 UvrD/AddA helicase, N-terminal CH48_1856 IPR003961 Fibronectin type III CH48_1856 IPR036116 Fibronectin type III superfamily CH48_1856 IPR000743 Glycoside hydrolase, family 28 CH48_1856 IPR011050 Pectin lyase fold/virulence factor CH48_1856 IPR012334 Pectin lyase fold CH48_1856 IPR013783 Immunoglobulin-like fold CH48_1857 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase CH48_1857 IPR030673 Pyrophosphatase, GppA/Ppx-type CH48_1857 IPR022371 Exopolyphosphatase CH48_1857 IPR003695 Ppx/GppA phosphatase CH48_1858 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1858 IPR014001 Helicase superfamily 1/2, ATP-binding domain CH48_1858 IPR001650 Helicase, C-terminal CH48_1858 IPR014014 RNA helicase, DEAD-box type, Q motif CH48_1858 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CH48_1858 IPR011545 DEAD/DEAH box helicase domain CH48_1858 IPR023554 ATP-dependent RNA helicase RhlB type CH48_1859 IPR013766 Thioredoxin domain CH48_1859 IPR005746 Thioredoxin CH48_1859 IPR017937 Thioredoxin, conserved site CH48_1859 IPR036249 Thioredoxin-like superfamily CH48_186 IPR000531 TonB-dependent receptor-like, beta-barrel CH48_186 IPR010916 TonB box, conserved site CH48_186 IPR037066 TonB-dependent receptor, plug domain superfamily CH48_186 IPR012910 TonB-dependent receptor, plug domain CH48_186 IPR039426 Vitamin B12 transporter BtuB-like CH48_186 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CH48_186 IPR010917 TonB-dependent receptor, conserved site CH48_1860 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1860 IPR011112 Rho termination factor, N-terminal CH48_1860 IPR011129 Cold shock domain CH48_1860 IPR036269 Rho termination factor, N-terminal domain superfamily CH48_1860 IPR011113 Rho termination factor, RNA-binding domain CH48_1860 IPR003593 AAA+ ATPase domain CH48_1860 IPR012340 Nucleic acid-binding, OB-fold CH48_1860 IPR004665 Transcription termination factor Rho CH48_1860 IPR041703 Transcription termination factor Rho, ATP binding domain CH48_1860 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CH48_1862 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase CH48_1862 IPR000715 Glycosyl transferase, family 4 CH48_1863 IPR003856 Polysaccharide chain length determinant N-terminal domain CH48_1863 IPR032895 ECA polysaccharide chain length modulation protein WzzE CH48_1864 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like CH48_1864 IPR032892 UDP-N-acetylglucosamine 2-epimerase WecB CH48_1864 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain CH48_1865 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase CH48_1865 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal CH48_1865 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily CH48_1865 IPR036291 NAD(P)-binding domain superfamily CH48_1865 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CH48_1865 IPR017476 UDP-glucose/GDP-mannose dehydrogenase CH48_1865 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal CH48_1865 IPR032891 UDP-N-acetyl-D-mannosamine dehydrogenase WecC CH48_1865 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation CH48_1866 IPR016040 NAD(P)-binding domain CH48_1866 IPR005888 dTDP-glucose 4,6-dehydratase CH48_1866 IPR036291 NAD(P)-binding domain superfamily CH48_1867 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form CH48_1867 IPR005835 Nucleotidyl transferase domain CH48_1867 IPR029044 Nucleotide-diphospho-sugar transferases CH48_1868 IPR016181 Acyl-CoA N-acyltransferase CH48_1868 IPR012752 dTDP-fucosamine acetyltransferase WecD CH48_1868 IPR002110 Ankyrin repeat CH48_1868 IPR000182 GNAT domain CH48_1868 IPR020683 Ankyrin repeat-containing domain CH48_1869 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CH48_1869 IPR012749 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE-like CH48_1869 IPR032894 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE CH48_1869 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CH48_1869 IPR015424 Pyridoxal phosphate-dependent transferase CH48_1869 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CH48_187 IPR003593 AAA+ ATPase domain CH48_187 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_187 IPR015863 ABC transporter, hemin import, HmuV CH48_187 IPR003439 ABC transporter-like CH48_1870 IPR002797 Polysaccharide biosynthesis protein CH48_1870 IPR032896 Lipid III flippase WzxE CH48_1871 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase CH48_1872 IPR010691 Probable ECA polymerase WzyE CH48_1873 IPR004629 Glycosyl transferase WecB/TagA/CpsF CH48_1873 IPR023085 UDP-N-acetyl-D-mannosaminuronic acid transferase CH48_1874 IPR004840 Amino acid permease, conserved site CH48_1874 IPR004841 Amino acid permease/ SLC12A domain CH48_188 IPR037294 ABC transporter, BtuC-like CH48_188 IPR000522 ABC transporter, permease protein, BtuC-like CH48_1881 IPR013026 Tetratricopeptide repeat-containing domain CH48_1881 IPR011990 Tetratricopeptide-like helical domain superfamily CH48_1881 IPR013105 Tetratricopeptide repeat 2 CH48_1881 IPR010817 HemY, N-terminal CH48_1881 IPR005254 Heme biosynthesis-associated TPR protein CH48_1881 IPR019734 Tetratricopeptide repeat CH48_1882 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX CH48_1883 IPR039793 Uroporphyrinogen-III synthase CH48_1883 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase CH48_1883 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily CH48_1884 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site CH48_1884 IPR000860 Porphobilinogen deaminase CH48_1884 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily CH48_1884 IPR022418 Porphobilinogen deaminase, C-terminal CH48_1884 IPR022417 Porphobilinogen deaminase, N-terminal CH48_1885 IPR000274 Adenylate cyclase, class-I CH48_1885 IPR024686 Adenylate cyclase class-I, conserved site CH48_1885 IPR024685 Adenylate cyclase class-I, N-terminal domain CH48_1886 IPR002908 Frataxin/CyaY CH48_1886 IPR036524 Frataxin/CyaY superfamily CH48_1886 IPR020895 Frataxin conserved site CH48_1887 IPR032831 Prokaryotic lipoprotein-attachment site CH48_1888 IPR001653 Diaminopimelate epimerase, DapF CH48_1888 IPR018510 Diaminopimelate epimerase, active site CH48_1889 IPR029016 GAF-like domain superfamily CH48_1889 IPR007435 Protein of unknown function DUF484 CH48_189 IPR004840 Amino acid permease, conserved site CH48_189 IPR004841 Amino acid permease/ SLC12A domain CH48_1890 IPR023009 Tyrosine recombinase XerC/XerD CH48_1890 IPR011931 Tyrosine recombinase XerC CH48_1890 IPR004107 Integrase, SAM-like, N-terminal CH48_1890 IPR002104 Integrase, catalytic domain CH48_1890 IPR010998 Integrase/recombinase, N-terminal CH48_1890 IPR013762 Integrase-like, catalytic domain superfamily CH48_1890 IPR011010 DNA breaking-rejoining enzyme, catalytic core CH48_1891 IPR023214 HAD superfamily CH48_1891 IPR041492 Haloacid dehalogenase-like hydrolase CH48_1891 IPR006439 HAD hydrolase, subfamily IA CH48_1891 IPR036412 HAD-like superfamily CH48_1892 IPR013986 DExx box DNA helicase domain superfamily CH48_1892 IPR014017 UvrD-like DNA helicase, C-terminal CH48_1892 IPR000212 DNA helicase, UvrD/REP type CH48_1892 IPR005753 DNA helicase, ATP-dependent, UvrD type CH48_1892 IPR014016 UvrD-like helicase, ATP-binding domain CH48_1892 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1892 IPR034739 UvrD/AddA helicase, N-terminal CH48_1894 IPR008322 Uncharacterised protein family UPF0261 CH48_1895 IPR009215 TIM-barrel domain, IGPS-like CH48_1895 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CH48_1895 IPR013785 Aldolase-type TIM barrel CH48_1896 IPR004488 Magnesium/cobalt transport protein CorA CH48_1896 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB CH48_1897 IPR000620 EamA domain CH48_1897 IPR004626 RarD protein CH48_1898 IPR029069 HotDog domain superfamily CH48_1898 IPR006683 Thioesterase domain CH48_1898 IPR003736 Phenylacetic acid degradation-related domain CH48_1899 IPR003187 Phospholipase A1 CH48_1899 IPR036541 Phospholipase A1 superfamily CH48_19 IPR002549 Transmembrane protein TqsA-like CH48_190 IPR036390 Winged helix DNA-binding domain superfamily CH48_190 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_190 IPR000847 Transcription regulator HTH, LysR CH48_190 IPR005119 LysR, substrate-binding CH48_1900 IPR018982 RQC domain CH48_1900 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain CH48_1900 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_1900 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1900 IPR002121 HRDC domain CH48_1900 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial CH48_1900 IPR001650 Helicase, C-terminal CH48_1900 IPR014001 Helicase superfamily 1/2, ATP-binding domain CH48_1900 IPR004589 DNA helicase, ATP-dependent, RecQ type CH48_1900 IPR011545 DEAD/DEAH box helicase domain CH48_1900 IPR010997 HRDC-like superfamily CH48_1901 IPR001123 Amino acid exporter protein, LeuE-type CH48_1901 IPR004778 Homoserine/Threonine efflux protein CH48_1902 IPR004778 Homoserine/Threonine efflux protein CH48_1902 IPR001123 Amino acid exporter protein, LeuE-type CH48_1903 IPR029058 Alpha/Beta hydrolase fold CH48_1903 IPR022742 Serine aminopeptidase, S33 CH48_1904 IPR000150 Cof family CH48_1904 IPR006379 HAD-superfamily hydrolase, subfamily IIB CH48_1904 IPR036412 HAD-like superfamily CH48_1904 IPR023214 HAD superfamily CH48_1905 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily CH48_1905 IPR030395 Glycerophosphodiester phosphodiesterase domain CH48_1906 IPR020846 Major facilitator superfamily domain CH48_1906 IPR005267 Glycerol-3-phosphate transporter CH48_1906 IPR036259 MFS transporter superfamily CH48_1906 IPR021159 Glycerate/sugar phosphate transporter, conserved site CH48_1906 IPR000849 Sugar phosphate transporter CH48_1906 IPR011701 Major facilitator superfamily CH48_1907 IPR007419 BFD-like [2Fe-2S]-binding domain CH48_1907 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit CH48_1907 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase CH48_1907 IPR036188 FAD/NAD(P)-binding domain superfamily CH48_1907 IPR006076 FAD dependent oxidoreductase CH48_1907 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily CH48_1908 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain CH48_1908 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit CH48_1908 IPR036188 FAD/NAD(P)-binding domain superfamily CH48_1909 IPR004017 Cysteine-rich domain CH48_1909 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CH48_1909 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CH48_1909 IPR009051 Alpha-helical ferredoxin CH48_1909 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit CH48_1910 IPR014894 Protein DcrB CH48_1910 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich CH48_1911 IPR003744 Queuosine precursor transporter CH48_1912 IPR036868 TusA-like domain superfamily CH48_1912 IPR001455 TusA-like domain CH48_1912 IPR022931 Sulfur carrier protein TusA CH48_1913 IPR023299 P-type ATPase, cytoplasmic domain N CH48_1913 IPR018303 P-type ATPase, phosphorylation site CH48_1913 IPR023298 P-type ATPase, transmembrane domain superfamily CH48_1913 IPR008250 P-type ATPase, A domain superfamily CH48_1913 IPR036412 HAD-like superfamily CH48_1913 IPR023214 HAD superfamily CH48_1913 IPR017969 Heavy-metal-associated, conserved site CH48_1913 IPR006121 Heavy metal-associated domain, HMA CH48_1913 IPR027256 P-type ATPase, subfamily IB CH48_1913 IPR001757 P-type ATPase CH48_1913 IPR036163 Heavy metal-associated domain superfamily CH48_1915 IPR012506 YhhN-like CH48_1918 IPR009525 Protein of unknown function DUF1145 CH48_1919 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH48_1919 IPR004398 RNA methyltransferase, RsmD CH48_1919 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CH48_1920 IPR013822 Signal recognition particle SRP54, helical bundle CH48_1920 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1920 IPR003593 AAA+ ATPase domain CH48_1920 IPR004390 Signal-recognition particle receptor FtsY CH48_1920 IPR036225 SRP/SRP receptor, N-terminal CH48_1920 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily CH48_1920 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain CH48_1921 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1921 IPR003593 AAA+ ATPase domain CH48_1921 IPR005286 Cell division protein FtsE, ATP-binding CH48_1921 IPR017871 ABC transporter, conserved site CH48_1921 IPR003439 ABC transporter-like CH48_1922 IPR040690 FtsX, extracellular domain CH48_1922 IPR003838 ABC transporter permease protein domain CH48_1922 IPR004513 Cell division protein FtsX CH48_1923 IPR009042 RNA polymerase sigma-70 region 1.2 CH48_1923 IPR007627 RNA polymerase sigma-70 region 2 CH48_1923 IPR014284 RNA polymerase sigma-70 like domain CH48_1923 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_1923 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria CH48_1923 IPR013324 RNA polymerase sigma factor, region 3/4-like CH48_1923 IPR013325 RNA polymerase sigma factor, region 2 CH48_1923 IPR000943 RNA polymerase sigma-70 CH48_1923 IPR007630 RNA polymerase sigma-70 region 4 CH48_1926 IPR000182 GNAT domain CH48_1926 IPR016181 Acyl-CoA N-acyltransferase CH48_1926 IPR032900 PanD regulatory factor PanZ CH48_1926 IPR040448 PanZ, acetyltransferase (GNAT) domain CH48_1927 IPR028081 Leucine-binding protein domain CH48_1927 IPR028082 Periplasmic binding protein-like I CH48_1927 IPR000709 Leu/Ile/Val-binding protein CH48_1928 IPR001851 ABC transporter, permease CH48_1929 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal CH48_1929 IPR001851 ABC transporter, permease CH48_1930 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1930 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CH48_1930 IPR017871 ABC transporter, conserved site CH48_1930 IPR003593 AAA+ ATPase domain CH48_1930 IPR003439 ABC transporter-like CH48_1931 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein CH48_1931 IPR003593 AAA+ ATPase domain CH48_1931 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1931 IPR017871 ABC transporter, conserved site CH48_1931 IPR003439 ABC transporter-like CH48_1938 IPR006061 Solute-binding family 1, conserved site CH48_1938 IPR006059 Bacterial extracellular solute-binding protein CH48_1939 IPR035906 MetI-like superfamily CH48_1939 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CH48_194 IPR004630 Uncharacterised protein family UPF0324, bacteria CH48_194 IPR018383 Uncharacterised protein family UPF0324, prokaryote CH48_1940 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CH48_1940 IPR030165 sn-Glycerol-3-phosphate transport system permease protein UgpE CH48_1940 IPR035906 MetI-like superfamily CH48_1941 IPR017922 sn-Glycerol-3-phosphate import ATP-binding protein UgpC CH48_1941 IPR040582 MalK, OB fold domain CH48_1941 IPR008995 Molybdate/tungstate binding, C-terminal CH48_1941 IPR017871 ABC transporter, conserved site CH48_1941 IPR003439 ABC transporter-like CH48_1941 IPR003593 AAA+ ATPase domain CH48_1941 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1942 IPR030395 Glycerophosphodiester phosphodiesterase domain CH48_1942 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily CH48_1943 IPR004776 Membrane transport protein CH48_1944 IPR037406 HTH-type transcriptional regulator MetR, PBP2 domain CH48_1944 IPR005119 LysR, substrate-binding CH48_1944 IPR036390 Winged helix DNA-binding domain superfamily CH48_1944 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_1944 IPR000847 Transcription regulator HTH, LysR CH48_1945 IPR000620 EamA domain CH48_1945 IPR004779 Carboxylate/Amino Acid/Amine Transporter CH48_1946 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal CH48_1946 IPR006276 Cobalamin-independent methionine synthase CH48_1946 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal CH48_1946 IPR038071 UROD/MetE-like superfamily CH48_1947 IPR029058 Alpha/Beta hydrolase fold CH48_1947 IPR002925 Dienelactone hydrolase CH48_1948 IPR018016 Nucleoside phosphorylase, conserved site CH48_1948 IPR000845 Nucleoside phosphorylase domain CH48_1948 IPR035994 Nucleoside phosphorylase superfamily CH48_1948 IPR010058 Uridine phosphorylase CH48_195 IPR036237 Xylose isomerase-like superfamily CH48_195 IPR018246 AP endonuclease 2, zinc binding site CH48_195 IPR001719 AP endonuclease 2 CH48_195 IPR013022 Xylose isomerase-like, TIM barrel domain CH48_1951 IPR003706 CstA, N-terminal domain CH48_1951 IPR025299 CstA, C-terminal domain CH48_1952 IPR032816 SNARE associated Golgi protein CH48_1952 IPR032818 DedA family CH48_1953 IPR003798 DNA recombination RmuC CH48_1954 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH48_1954 IPR004033 UbiE/COQ5 methyltransferase CH48_1954 IPR023576 UbiE/COQ5 methyltransferase, conserved site CH48_1955 IPR038989 Ubiquinone biosynthesis protein UbiJ CH48_1955 IPR036527 SCP2 sterol-binding domain superfamily CH48_1955 IPR003033 SCP2 sterol-binding domain CH48_1956 IPR004147 UbiB domain CH48_1956 IPR010232 Probable protein kinase UbiB CH48_1956 IPR011009 Protein kinase-like domain superfamily CH48_1957 IPR003369 Sec-independent protein translocase protein TatA/B/E CH48_1957 IPR006312 Sec-independent protein translocase protein TatA/E CH48_1958 IPR018448 Twin-arginine translocation protein TatB CH48_1959 IPR002033 Sec-independent periplasmic protein translocase TatC CH48_1959 IPR019820 Sec-independent periplasmic protein translocase, conserved site CH48_196 IPR042186 Outer membrane usher protein FimD, plug domain CH48_196 IPR018030 Fimbrial membrane usher, conserved site CH48_196 IPR025885 PapC, N-terminal domain CH48_196 IPR037224 PapC, N-terminal domain superfamily CH48_196 IPR000015 Outer membrane usher protein CH48_196 IPR025949 PapC-like, C-terminal domain CH48_1960 IPR024918 3'-5' ssDNA/RNA exonuclease TatD CH48_1960 IPR018228 Deoxyribonuclease, TatD-related, conserved site CH48_1960 IPR032466 Metal-dependent hydrolase CH48_1960 IPR001130 TatD family CH48_1961 IPR030656 Delta-aminolevulinic acid dehydratase, active site CH48_1961 IPR013785 Aldolase-type TIM barrel CH48_1961 IPR001731 Delta-aminolevulinic acid dehydratase CH48_1962 IPR010215 Transcription antitermination protein RfaH CH48_1962 IPR006645 NusG, N-terminal CH48_1962 IPR036735 NusG, N-terminal domain superfamily CH48_1963 IPR023677 UbiD decarboxylyase, bacteria CH48_1963 IPR002830 UbiD decarboxylyase family CH48_1964 IPR001433 Oxidoreductase FAD/NAD(P)-binding CH48_1964 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain CH48_1964 IPR017927 FAD-binding domain, ferredoxin reductase-type CH48_1964 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CH48_1964 IPR017938 Riboflavin synthase-like beta-barrel CH48_1965 IPR016039 Thiolase-like CH48_1965 IPR002155 Thiolase CH48_1965 IPR012805 Acetyl-CoA C-acyltransferase FadA CH48_1965 IPR020610 Thiolase, active site CH48_1965 IPR020617 Thiolase, C-terminal CH48_1965 IPR020613 Thiolase, conserved site CH48_1965 IPR020616 Thiolase, N-terminal CH48_1965 IPR020615 Thiolase, acyl-enzyme intermediate active site CH48_1966 IPR036291 NAD(P)-binding domain superfamily CH48_1966 IPR012799 Fatty oxidation complex, alpha subunit FadB CH48_1966 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CH48_1966 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site CH48_1966 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding CH48_1966 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal CH48_1966 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CH48_1966 IPR029045 ClpP/crotonase-like domain superfamily CH48_1966 IPR001753 Enoyl-CoA hydratase/isomerase CH48_1968 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CH48_1968 IPR036005 Creatinase/aminopeptidase-like CH48_1968 IPR000994 Peptidase M24 CH48_1968 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site CH48_1968 IPR022846 Xaa-Pro dipeptidase CH48_1969 IPR015796 Impact family, bacterial/archaeal CH48_1969 IPR023582 Impact family CH48_1969 IPR035647 EF-G domain III/V-like CH48_1969 IPR020568 Ribosomal protein S5 domain 2-type fold CH48_1969 IPR036956 Impact, N-terminal domain superfamily CH48_1969 IPR001498 Impact, N-terminal CH48_1969 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal CH48_1969 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site CH48_197 IPR016147 Pili assembly chaperone, N-terminal CH48_197 IPR018046 Pili assembly chaperone, conserved site CH48_197 IPR001829 Pili assembly chaperone, bacterial CH48_197 IPR036316 Pili assembly chaperone, C-terminal domain superfamily CH48_197 IPR016148 Pili assembly chaperone, C-terminal CH48_197 IPR013783 Immunoglobulin-like fold CH48_197 IPR008962 PapD-like superfamily CH48_1970 IPR004772 TrkH potassium transport family CH48_1970 IPR003445 Cation transporter CH48_1971 IPR026816 Flavodoxin domain CH48_1971 IPR001226 Flavodoxin, conserved site CH48_1971 IPR008254 Flavodoxin/nitric oxide synthase CH48_1971 IPR029039 Flavoprotein-like superfamily CH48_1978 IPR003346 Transposase, IS116/IS110/IS902 CH48_1978 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal CH48_1979 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal CH48_1979 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase CH48_1979 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily CH48_1979 IPR006094 FAD linked oxidase, N-terminal CH48_1979 IPR036318 FAD-binding, type PCMH-like superfamily CH48_1979 IPR016169 FAD-binding, type PCMH, subdomain 2 CH48_1979 IPR016167 FAD-binding, type PCMH, subdomain 1 CH48_1979 IPR016166 FAD-binding domain, PCMH-type CH48_1980 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain CH48_1980 IPR036390 Winged helix DNA-binding domain superfamily CH48_1980 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_1980 IPR004409 Biotin operon repressor, helix-turn-helix domain CH48_1980 IPR008988 Transcriptional repressor, C-terminal CH48_1980 IPR004408 Biotin--acetyl-CoA-carboxylase ligase CH48_1980 IPR030855 Bifunctional ligase/repressor BirA CH48_1980 IPR013196 Helix-turn-helix, type 11 CH48_1980 IPR003142 Biotin protein ligase, C-terminal CH48_1981 IPR006083 Phosphoribulokinase/uridine kinase CH48_1981 IPR004566 Pantothenate kinase CH48_1981 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1982 IPR016181 Acyl-CoA N-acyltransferase CH48_1982 IPR000182 GNAT domain CH48_1987 IPR031157 Tr-type G domain, conserved site CH48_1987 IPR004161 Translation elongation factor EFTu-like, domain 2 CH48_1987 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain CH48_1987 IPR005225 Small GTP-binding protein domain CH48_1987 IPR000795 Transcription factor, GTP-binding domain CH48_1987 IPR009000 Translation protein, beta-barrel domain superfamily CH48_1987 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CH48_1987 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CH48_1987 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_1987 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle CH48_1987 IPR033720 Elongation factor Tu, domain 2 CH48_1988 IPR005807 SecE subunit of protein translocation complex, bacterial-like CH48_1988 IPR038379 SecE superfamily CH48_1988 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit CH48_1989 IPR008991 Translation protein SH3-like domain superfamily CH48_1989 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site CH48_1989 IPR001062 Transcription antitermination protein, NusG CH48_1989 IPR014722 Ribosomal protein L2, domain 2 CH48_1989 IPR036735 NusG, N-terminal domain superfamily CH48_1989 IPR006645 NusG, N-terminal CH48_1989 IPR005824 KOW CH48_199 IPR035182 Protein of unknown function PsaF CH48_1990 IPR020784 Ribosomal protein L11, N-terminal CH48_1990 IPR020785 Ribosomal protein L11, conserved site CH48_1990 IPR036769 Ribosomal protein L11, C-terminal domain superfamily CH48_1990 IPR020783 Ribosomal protein L11, C-terminal CH48_1990 IPR006519 Ribosomal protein L11, bacterial-type CH48_1990 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily CH48_1990 IPR000911 Ribosomal protein L11/L12 CH48_1991 IPR005878 Ribosomal protein L1, bacterial-type CH48_1991 IPR023674 Ribosomal protein L1-like CH48_1991 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein CH48_1991 IPR002143 Ribosomal protein L1 CH48_1991 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich CH48_1991 IPR023673 Ribosomal protein L1, conserved site CH48_1992 IPR001790 Ribosomal protein L10P CH48_1992 IPR022973 Ribosomal protein L10 CH48_1992 IPR002363 Ribosomal protein L10, eubacterial, conserved site CH48_1993 IPR013823 Ribosomal protein L7/L12, C-terminal CH48_1993 IPR008932 Ribosomal protein L7/L12, oligomerisation CH48_1993 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily CH48_1993 IPR000206 Ribosomal protein L7/L12 CH48_1993 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CH48_1994 IPR007642 RNA polymerase Rpb2, domain 2 CH48_1994 IPR037034 RNA polymerase Rpb2, domain 2 superfamily CH48_1994 IPR014724 RNA polymerase Rpb2, OB-fold CH48_1994 IPR007641 RNA polymerase Rpb2, domain 7 CH48_1994 IPR007121 RNA polymerase, beta subunit, conserved site CH48_1994 IPR007644 RNA polymerase, beta subunit, protrusion CH48_1994 IPR015712 DNA-directed RNA polymerase, subunit 2 CH48_1994 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain CH48_1994 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily CH48_1994 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain CH48_1994 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type CH48_1994 IPR007645 RNA polymerase Rpb2, domain 3 CH48_1995 IPR000722 RNA polymerase, alpha subunit CH48_1995 IPR007083 RNA polymerase Rpb1, domain 4 CH48_1995 IPR007081 RNA polymerase Rpb1, domain 5 CH48_1995 IPR038120 RNA polymerase Rpb1, funnel domain superfamily CH48_1995 IPR012754 DNA-directed RNA polymerase, subunit beta-prime CH48_1995 IPR006592 RNA polymerase, N-terminal CH48_1995 IPR007080 RNA polymerase Rpb1, domain 1 CH48_1995 IPR007066 RNA polymerase Rpb1, domain 3 CH48_1995 IPR042102 RNA polymerase Rpb1, domain 3 superfamily CH48_1997 IPR013785 Aldolase-type TIM barrel CH48_1997 IPR010722 Biotin and thiamin synthesis-associated domain CH48_1997 IPR007197 Radical SAM CH48_1997 IPR034428 ThiH/NocL/HydG-like CH48_1997 IPR012726 Thiazole biosynthesis ThiH CH48_1998 IPR013785 Aldolase-type TIM barrel CH48_1998 IPR033983 Thiazole synthase ThiG CH48_1998 IPR008867 Thiazole synthase CH48_1999 IPR012675 Beta-grasp domain superfamily CH48_1999 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CH48_1999 IPR010035 ThiS, thiamine-biosynthesis CH48_1999 IPR003749 Sulfur carrier ThiS/MoaD-like CH48_2 IPR014031 Beta-ketoacyl synthase, C-terminal CH48_2 IPR000794 Beta-ketoacyl synthase CH48_2 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 CH48_2 IPR018201 Beta-ketoacyl synthase, active site CH48_2 IPR014030 Beta-ketoacyl synthase, N-terminal CH48_2 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CH48_2 IPR016039 Thiolase-like CH48_200 IPR016032 Signal transduction response regulator, C-terminal effector CH48_200 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_200 IPR001867 OmpR/PhoB-type DNA-binding domain CH48_2000 IPR035985 Ubiquitin-activating enzyme CH48_2000 IPR012731 Thiazole biosynthesis adenylyltransferase ThiF CH48_2000 IPR000594 THIF-type NAD/FAD binding fold CH48_2001 IPR036206 Thiamin phosphate synthase superfamily CH48_2001 IPR034291 Thiamine phosphate synthase CH48_2001 IPR022998 Thiamine phosphate synthase/TenI CH48_2001 IPR013785 Aldolase-type TIM barrel CH48_2002 IPR025747 ThiC-associated domain CH48_2002 IPR038521 ThiC/Bza superfamily CH48_2002 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B CH48_2002 IPR037509 Phosphomethylpyrimidine synthase CH48_2003 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ CH48_2003 IPR023785 Regulator of RNA polymerase sigma(70) subunit, Rsd CH48_2003 IPR038309 Rsd/AlgQ superfamily CH48_2004 IPR000086 NUDIX hydrolase domain CH48_2004 IPR015376 Zinc ribbon, NADH pyrophosphatase CH48_2004 IPR022925 NADH pyrophosphatase NudC CH48_2004 IPR015797 NUDIX hydrolase-like domain superfamily CH48_2004 IPR020084 NUDIX hydrolase, conserved site CH48_2005 IPR006361 Uroporphyrinogen decarboxylase HemE CH48_2005 IPR038071 UROD/MetE-like superfamily CH48_2005 IPR000257 Uroporphyrinogen decarboxylase (URO-D) CH48_2006 IPR007581 Endonuclease V CH48_2007 IPR023381 YP001051499.1-like domain superfamily CH48_2007 IPR007338 Protein of unknown function DUF416 CH48_2008 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily CH48_2008 IPR020816 Histone-like DNA-binding protein, conserved site CH48_2008 IPR000119 Histone-like DNA-binding protein CH48_2009 IPR016500 Uncharacterised conserved protein UCP006993 CH48_2009 IPR010858 Protein of unknown function DUF1481 CH48_201 IPR003352 Phosphotransferase system, EIIC CH48_201 IPR003501 Phosphotransferase system, EIIB component, type 2/3 CH48_201 IPR013014 Phosphotransferase system, EIIC component, type 2 CH48_201 IPR013011 Phosphotransferase system, EIIB component, type 2 CH48_201 IPR003353 Phosphotransferase system, fructose-specific IIB subunit CH48_201 IPR006327 Phosphotransferase system, fructose IIC component CH48_201 IPR036095 PTS system IIB component-like superfamily CH48_2010 IPR013815 ATP-grasp fold, subdomain 1 CH48_2010 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily CH48_2010 IPR011761 ATP-grasp fold CH48_2010 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal CH48_2010 IPR020559 Phosphoribosylglycinamide synthetase, conserved site CH48_2010 IPR011054 Rudiment single hybrid motif CH48_2010 IPR016185 Pre-ATP-grasp domain superfamily CH48_2010 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CH48_2010 IPR000115 Phosphoribosylglycinamide synthetase CH48_2010 IPR020560 Phosphoribosylglycinamide synthetase, C-domain CH48_2011 IPR024051 AICAR transformylase, duplicated domain superfamily CH48_2011 IPR016193 Cytidine deaminase-like CH48_2011 IPR036914 Methylglyoxal synthase-like domain superfamily CH48_2011 IPR011607 Methylglyoxal synthase-like domain CH48_2011 IPR002695 Bifunctional purine biosynthesis protein PurH-like CH48_202 IPR029056 Ribokinase-like CH48_202 IPR022463 Fructose 1-phosphate kinase CH48_202 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CH48_202 IPR011611 Carbohydrate kinase PfkB CH48_202 IPR017583 Tagatose/fructose phosphokinase CH48_2020 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal CH48_2020 IPR003346 Transposase, IS116/IS110/IS902 CH48_2021 IPR005697 Homoserine O-succinyltransferase MetA CH48_2021 IPR033752 MetA family CH48_2021 IPR029062 Class I glutamine amidotransferase-like CH48_2022 IPR011076 Malate synthase-like superfamily CH48_2022 IPR006252 Malate synthase A CH48_2022 IPR001465 Malate synthase CH48_2022 IPR019830 Malate synthase, conserved site CH48_2023 IPR039556 ICL/PEPM domain CH48_2023 IPR006254 Isocitrate lyase CH48_2023 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site CH48_2023 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CH48_2023 IPR040442 Pyruvate kinase-like domain superfamily CH48_2024 IPR010452 Isocitrate dehydrogenase kinasephosphatase CH48_2025 IPR036390 Winged helix DNA-binding domain superfamily CH48_2025 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_2025 IPR005471 Transcription regulator IclR, N-terminal CH48_2025 IPR014757 Transcription regulator IclR, C-terminal CH48_2025 IPR029016 GAF-like domain superfamily CH48_2026 IPR006158 Cobalamin (vitamin B12)-binding domain CH48_2026 IPR011005 Dihydropteroate synthase-like CH48_2026 IPR036724 Cobalamin-binding domain superfamily CH48_2026 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain CH48_2026 IPR033706 Methionine synthase, B12-binding domain CH48_2026 IPR011822 Cobalamin-dependent methionine synthase CH48_2026 IPR036594 Methionine synthase domain CH48_2026 IPR000489 Pterin-binding domain CH48_2026 IPR004223 Vitamin B12-dependent methionine synthase, activation domain CH48_2026 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily CH48_2026 IPR003726 Homocysteine-binding domain CH48_2026 IPR036589 Homocysteine-binding domain superfamily CH48_2027 IPR008638 Filamentous haemagglutinin, N-terminal CH48_2027 IPR025157 Hemagglutinin repeat CH48_2027 IPR012334 Pectin lyase fold CH48_2027 IPR011050 Pectin lyase fold/virulence factor CH48_2028 IPR027282 Two partner secretion pathway transporter CH48_2028 IPR034746 POTRA domain CH48_2028 IPR005565 Haemolysin activator HlyB, C-terminal CH48_2028 IPR035251 ShlB, POTRA domain CH48_2028 IPR013686 Polypeptide-transport-associated, ShlB-type CH48_2029 IPR038770 Sodium/solute symporter superfamily CH48_2029 IPR004710 Bile acid:sodium symporter CH48_2029 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 CH48_203 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CH48_203 IPR000032 Phosphocarrier protein HPr-like CH48_203 IPR002114 Phosphotransferase system, HPr serine phosphorylation site CH48_203 IPR035895 HPr-like superfamily CH48_203 IPR016152 Phosphotransferase/anion transporter CH48_203 IPR002178 PTS EIIA type-2 domain CH48_2030 IPR018042 Aspartate kinase, conserved site CH48_2030 IPR001341 Aspartate kinase CH48_2030 IPR005260 Aspartate kinase, monofunctional class CH48_2030 IPR001048 Aspartate/glutamate/uridylate kinase CH48_2030 IPR041745 Lysine-sensitive aspartokinase 3, N-terminal catalytic domain CH48_2030 IPR036393 Acetylglutamate kinase-like superfamily CH48_2030 IPR002912 ACT domain CH48_2031 IPR023096 Phosphoglucose isomerase, C-terminal CH48_2031 IPR001672 Phosphoglucose isomerase (PGI) CH48_2031 IPR018189 Phosphoglucose isomerase, conserved site CH48_2031 IPR035476 Phosphoglucose isomerase, SIS domain 1 CH48_2031 IPR035482 Phosphoglucose isomerase, SIS domain 2 CH48_2032 IPR020948 Phosphate-starvation-induced PsiE-like CH48_2032 IPR009315 Phosphate-starvation-induced PsiE CH48_2033 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CH48_2033 IPR035906 MetI-like superfamily CH48_2034 IPR035906 MetI-like superfamily CH48_2034 IPR030156 Maltose/maltodextrin transport system permease protein MalF-like CH48_2034 IPR035277 MalF, N-terminal CH48_2034 IPR029345 Maltose transport system permease protein MalF, P2 domain CH48_2034 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CH48_2035 IPR006061 Solute-binding family 1, conserved site CH48_2035 IPR006059 Bacterial extracellular solute-binding protein CH48_2035 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein CH48_2036 IPR008995 Molybdate/tungstate binding, C-terminal CH48_2036 IPR040582 MalK, OB fold domain CH48_2036 IPR017871 ABC transporter, conserved site CH48_2036 IPR003439 ABC transporter-like CH48_2036 IPR003593 AAA+ ATPase domain CH48_2036 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_2036 IPR015855 ABC transporter, maltose/maltodextrin import, MalK CH48_2037 IPR003192 Porin, LamB-type CH48_2037 IPR036998 Porin, LamB-type superfamily CH48_2037 IPR023738 Maltoporin CH48_2038 IPR010794 Maltose operon periplasmic CH48_2039 IPR011009 Protein kinase-like domain superfamily CH48_204 IPR006357 HAD-superfamily hydrolase, subfamily IIA CH48_204 IPR036412 HAD-like superfamily CH48_204 IPR023214 HAD superfamily CH48_204 IPR020476 NUDIX hydrolase CH48_204 IPR015797 NUDIX hydrolase-like domain superfamily CH48_204 IPR020084 NUDIX hydrolase, conserved site CH48_204 IPR000086 NUDIX hydrolase domain CH48_2040 IPR007440 Chorismate--pyruvate lyase CH48_2040 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily CH48_2041 IPR006370 4-hydroxybenzoate polyprenyltransferase-like CH48_2041 IPR039653 Prenyltransferase CH48_2041 IPR000537 UbiA prenyltransferase family CH48_2041 IPR030470 UbiA prenyltransferase conserved site CH48_2042 IPR041728 GPAT/DHAPAT, acyltransferase domain CH48_2042 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase CH48_2042 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB CH48_2042 IPR002123 Phospholipid/glycerol acyltransferase CH48_2043 IPR000829 DAGK family CH48_2043 IPR033718 Diacylglycerol kinase, prokaryotic CH48_2043 IPR036945 Diacylglycerol kinase (DAGK) superfamily CH48_2044 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_2044 IPR015927 Peptidase S24/S26A/S26B/S26C CH48_2044 IPR006197 Peptidase S24, LexA-like CH48_2044 IPR006200 Transcription regulator LexA CH48_2044 IPR039418 LexA-like CH48_2044 IPR036390 Winged helix DNA-binding domain superfamily CH48_2044 IPR006199 LexA repressor, DNA-binding domain CH48_2044 IPR036286 LexA/Signal peptidase-like superfamily CH48_2045 IPR026042 Stress response protein YjbJ CH48_2045 IPR036629 YjbJ superfamily CH48_2045 IPR008462 CsbD-like domain CH48_2046 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_2046 IPR036390 Winged helix DNA-binding domain superfamily CH48_2046 IPR002481 Ferric-uptake regulator CH48_2047 IPR002656 Acyltransferase 3 CH48_2047 IPR036514 SGNH hydrolase superfamily CH48_2048 IPR004653 tRNA-dihydrouridine(20/20a) synthase CH48_2048 IPR013785 Aldolase-type TIM barrel CH48_2048 IPR018517 tRNA-dihydrouridine synthase, conserved site CH48_2048 IPR035587 DUS-like, FMN-binding domain CH48_2048 IPR001269 tRNA-dihydrouridine synthase CH48_2049 IPR014318 Phage shock protein, PspG CH48_205 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK CH48_205 IPR011031 Multihaem cytochrome CH48_205 IPR005126 NapC/NirT cytochrome c, N-terminal CH48_205 IPR038266 NapC/NirT cytochrome c superfamily CH48_205 IPR036280 Multiheme cytochrome superfamily CH48_2051 IPR013149 Alcohol dehydrogenase, C-terminal CH48_2051 IPR013154 Alcohol dehydrogenase, N-terminal CH48_2051 IPR036291 NAD(P)-binding domain superfamily CH48_2051 IPR020843 Polyketide synthase, enoylreductase domain CH48_2051 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site CH48_2051 IPR011032 GroES-like superfamily CH48_2052 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_2052 IPR007694 DNA helicase, DnaB-like, C-terminal CH48_2052 IPR007692 DNA helicase, DnaB type CH48_2052 IPR003593 AAA+ ATPase domain CH48_2052 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily CH48_2052 IPR007693 DNA helicase, DnaB-like, N-terminal CH48_2052 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CH48_2053 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site CH48_2053 IPR001608 Alanine racemase, N-terminal CH48_2053 IPR000821 Alanine racemase CH48_2053 IPR029066 PLP-binding barrel CH48_2053 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal CH48_2053 IPR011079 Alanine racemase, C-terminal CH48_2054 IPR004839 Aminotransferase, class I/classII CH48_2054 IPR000796 Aspartate/other aminotransferase CH48_2054 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site CH48_2054 IPR015424 Pyridoxal phosphate-dependent transferase CH48_2054 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CH48_2054 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CH48_2056 IPR038056 YjbR-like superfamily CH48_2056 IPR007351 Uncharacterised protein YjbR CH48_2057 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_2057 IPR003439 ABC transporter-like CH48_2057 IPR041552 UvrA DNA-binding domain CH48_2057 IPR041102 UvrA, interaction domain CH48_2057 IPR017871 ABC transporter, conserved site CH48_2057 IPR004602 UvrABC system subunit A CH48_2058 IPR011344 Single-stranded DNA-binding protein CH48_2058 IPR000424 Primosome PriB/single-strand DNA-binding CH48_2058 IPR012340 Nucleic acid-binding, OB-fold CH48_2059 IPR017508 HipA, N-terminal subdomain 1 CH48_2059 IPR012893 HipA-like, C-terminal CH48_206 IPR009010 Aspartate decarboxylase-like domain superfamily CH48_206 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase CH48_206 IPR041954 Trimethylamine-N-oxide reductase-like, molybdopterin-binding domain CH48_206 IPR041460 Molybdopterin oxidoreductase, N-terminal CH48_206 IPR006657 Molybdopterin dinucleotide-binding domain CH48_206 IPR006656 Molybdopterin oxidoreductase CH48_206 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site CH48_206 IPR006311 Twin-arginine translocation pathway, signal sequence CH48_2062 IPR006043 Xanthine/uracil/vitamin C permease CH48_2063 IPR006153 Cation/H+ exchanger CH48_2063 IPR018422 Cation/H+ exchanger, CPA1 family CH48_2063 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria CH48_2063 IPR038770 Sodium/solute symporter superfamily CH48_2064 IPR005119 LysR, substrate-binding CH48_2064 IPR000847 Transcription regulator HTH, LysR CH48_2064 IPR036390 Winged helix DNA-binding domain superfamily CH48_2064 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_2065 IPR023760 Holin-like protein CidA CH48_2065 IPR005538 LrgA/CidA family CH48_2067 IPR003593 AAA+ ATPase domain CH48_2067 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_2067 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type CH48_2067 IPR003439 ABC transporter-like CH48_2067 IPR017871 ABC transporter, conserved site CH48_2068 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CH48_2068 IPR035906 MetI-like superfamily CH48_2068 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CH48_2069 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CH48_2069 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CH48_2069 IPR035906 MetI-like superfamily CH48_207 IPR005358 Putative zinc- or iron-chelating domain containing protein CH48_2070 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CH48_2070 IPR018313 Solute-binding protein family 3, conserved site CH48_2072 IPR030857 Lipid A biosynthesis palmitoleoyltransferase, LpxP CH48_2072 IPR004960 Bacterial lipid A biosynthesis acyltransferase CH48_2072 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase CH48_2073 IPR001898 Solute carrier family 13 CH48_2073 IPR030676 Citrate carrier CitT-related CH48_2074 IPR019844 Cold-shock (CSD) domain CH48_2074 IPR012340 Nucleic acid-binding, OB-fold CH48_2074 IPR012156 Cold shock, CspA CH48_2074 IPR002059 Cold-shock protein, DNA-binding CH48_2074 IPR011129 Cold shock domain CH48_2075 IPR012156 Cold shock, CspA CH48_2075 IPR011129 Cold shock domain CH48_2075 IPR019844 Cold-shock (CSD) domain CH48_2075 IPR002059 Cold-shock protein, DNA-binding CH48_2075 IPR012340 Nucleic acid-binding, OB-fold CH48_2076 IPR008816 Glycine zipper 2TM domain CH48_2077 IPR011006 CheY-like superfamily CH48_2077 IPR000160 GGDEF domain CH48_2077 IPR029787 Nucleotide cyclase CH48_2077 IPR001789 Signal transduction response regulator, receiver domain CH48_2078 IPR002197 DNA binding HTH domain, Fis-type CH48_2078 IPR009057 Homeobox-like domain superfamily CH48_2078 IPR005412 DNA-binding protein Fis CH48_2079 IPR013785 Aldolase-type TIM barrel CH48_2079 IPR018517 tRNA-dihydrouridine synthase, conserved site CH48_2079 IPR001269 tRNA-dihydrouridine synthase CH48_2079 IPR035587 DUS-like, FMN-binding domain CH48_2079 IPR032887 tRNA-dihydrouridine synthase B CH48_2079 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal CH48_2079 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 CH48_208 IPR018227 Amino acid/polyamine transporter 2 CH48_208 IPR013059 Tryptophan/tyrosine transporter CH48_2080 IPR004498 Ribosomal protein L11 methyltransferase CH48_2080 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH48_2082 IPR018212 Sodium/solute symporter, conserved site CH48_2082 IPR038377 Sodium/glucose symporter superfamily CH48_2082 IPR011849 Sodium/pantothenate symporter CH48_2082 IPR001734 Sodium/solute symporter CH48_2083 IPR010398 Protein of unknown function DUF997 CH48_2084 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase CH48_2084 IPR011761 ATP-grasp fold CH48_2084 IPR013815 ATP-grasp fold, subdomain 1 CH48_2084 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain CH48_2084 IPR011764 Biotin carboxylation domain CH48_2084 IPR005482 Biotin carboxylase, C-terminal CH48_2084 IPR011054 Rudiment single hybrid motif CH48_2084 IPR016185 Pre-ATP-grasp domain superfamily CH48_2084 IPR005481 Biotin carboxylase-like, N-terminal domain CH48_2085 IPR001882 Biotin-binding site CH48_2085 IPR000089 Biotin/lipoyl attachment CH48_2085 IPR001249 Acetyl-CoA biotin carboxyl carrier CH48_2085 IPR011053 Single hybrid motif CH48_2086 IPR036441 Dehydroquinase, class II superfamily CH48_2086 IPR018509 Dehydroquinase, class II, conserved site CH48_2086 IPR001874 Dehydroquinase, class II CH48_2087 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ CH48_2087 IPR013130 Ferric reductase transmembrane component-like domain CH48_2088 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP CH48_2088 IPR000572 Oxidoreductase, molybdopterin-binding domain CH48_2088 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily CH48_2089 IPR020843 Polyketide synthase, enoylreductase domain CH48_2089 IPR014188 Acrylyl-CoA reductase AcuI CH48_2089 IPR036291 NAD(P)-binding domain superfamily CH48_2089 IPR011032 GroES-like superfamily CH48_2089 IPR013154 Alcohol dehydrogenase, N-terminal CH48_2089 IPR013149 Alcohol dehydrogenase, C-terminal CH48_209 IPR008991 Translation protein SH3-like domain superfamily CH48_209 IPR012340 Nucleic acid-binding, OB-fold CH48_209 IPR013852 Translation elongation factor P/YeiP, conserved site CH48_209 IPR001059 Translation elongation factor P/YeiP, central CH48_209 IPR014722 Ribosomal protein L2, domain 2 CH48_209 IPR013185 Translation elongation factor, KOW-like CH48_209 IPR020599 Translation elongation factor P/YeiP CH48_209 IPR011897 Translation elongation factor P-like, YeiP CH48_209 IPR015365 Elongation factor P, C-terminal CH48_2091 IPR029787 Nucleotide cyclase CH48_2091 IPR000160 GGDEF domain CH48_2091 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 CH48_2091 IPR035919 EAL domain superfamily CH48_2091 IPR001633 EAL domain CH48_2092 IPR004753 Cell shape determining protein MreB CH48_2093 IPR042177 Cell/Rod shape-determining protein MreC, domain 1 CH48_2093 IPR007221 Rod shape-determining protein MreC CH48_2093 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 CH48_2094 IPR007227 Cell shape-determining protein MreD CH48_2094 IPR026034 Cell shape-determining protein MreD, proteobacterial type CH48_2095 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein CH48_2095 IPR029001 Inosine triphosphate pyrophosphatase-like CH48_2096 IPR004659 Ribonuclease E/G CH48_2096 IPR012340 Nucleic acid-binding, OB-fold CH48_2096 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G CH48_2096 IPR003029 S1 domain CH48_2096 IPR022967 RNA-binding domain, S1 CH48_2097 IPR032712 AsmA-like, C-terminal CH48_2097 IPR011836 Conserved hypothetical protein CHP02099 CH48_2097 IPR025263 Domain of unknown function DUF3971 CH48_2098 IPR001110 Uncharacterised protein family UPF0012, conserved site CH48_2098 IPR003010 Carbon-nitrogen hydrolase CH48_2098 IPR036526 Carbon-nitrogen hydrolase superfamily CH48_2099 IPR036059 Metalloprotease TldD/PmbA superfamily CH48_2099 IPR002510 Metalloprotease TldD/PmbA CH48_2099 IPR025502 TldD CH48_2099 IPR035068 Metalloprotease TldD/PmbA, N-terminal CH48_210 IPR036237 Xylose isomerase-like superfamily CH48_210 IPR004628 Mannonate dehydratase CH48_2103 IPR041508 Toxin complex C-like repeat CH48_2103 IPR022385 Rhs repeat-associated core CH48_2103 IPR025968 YwqJ-like deaminase CH48_2104 IPR011324 Cytotoxic necrotizing factor-like, catalytic CH48_2104 IPR022385 Rhs repeat-associated core CH48_2104 IPR037040 Cytotoxic necrotizing factor, Rho-activating domain superfamily CH48_2104 IPR008430 Cytotoxic necrotizing factor, Rho-activating domain CH48_2104 IPR041508 Toxin complex C-like repeat CH48_2108 IPR003284 Salmonella virulence plasmid 65kDa B protein CH48_2108 IPR022045 Insecticide toxin TcdB middle/N-terminal CH48_2108 IPR022044 Insecticide toxin TcdB middle/C-terminal CH48_2109 IPR022045 Insecticide toxin TcdB middle/N-terminal CH48_2109 IPR003284 Salmonella virulence plasmid 65kDa B protein CH48_2109 IPR022044 Insecticide toxin TcdB middle/C-terminal CH48_211 IPR023027 Mannitol dehydrogenase, conserved site CH48_211 IPR013118 Mannitol dehydrogenase, C-terminal CH48_211 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CH48_211 IPR000669 Mannitol dehydrogenase CH48_211 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CH48_211 IPR036291 NAD(P)-binding domain superfamily CH48_211 IPR013131 Mannitol dehydrogenase, N-terminal CH48_2113 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_2113 IPR036390 Winged helix DNA-binding domain superfamily CH48_2113 IPR000847 Transcription regulator HTH, LysR CH48_2113 IPR005119 LysR, substrate-binding CH48_2114 IPR000847 Transcription regulator HTH, LysR CH48_2114 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_2114 IPR036390 Winged helix DNA-binding domain superfamily CH48_2114 IPR005119 LysR, substrate-binding CH48_2115 IPR012451 Protein of unknown function DUF1656 CH48_2116 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA CH48_2116 IPR039562 Membrane fusion protein, biotin-lipoyl like domain CH48_2116 IPR006143 RND efflux pump, membrane fusion protein CH48_2117 IPR023706 Para-hydroxybenzoic acid efflux pump, subunit AaeB CH48_2117 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein CH48_2118 IPR010102 Succinate semialdehyde dehydrogenase CH48_2118 IPR016163 Aldehyde dehydrogenase, C-terminal CH48_2118 IPR016160 Aldehyde dehydrogenase, cysteine active site CH48_2118 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CH48_2118 IPR016162 Aldehyde dehydrogenase, N-terminal CH48_2118 IPR015590 Aldehyde dehydrogenase domain CH48_2118 IPR016161 Aldehyde/histidinol dehydrogenase CH48_212 IPR036390 Winged helix DNA-binding domain superfamily CH48_212 IPR008920 Transcription regulator FadR/GntR, C-terminal CH48_212 IPR011711 GntR, C-terminal CH48_212 IPR000524 Transcription regulator HTH, GntR CH48_212 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_2120 IPR000468 Barstar (barnase inhibitor) CH48_2120 IPR035905 Barstar-like superfamily CH48_2121 IPR023153 PSPTO4464-like domain superfamily CH48_2121 IPR006839 Ribosome-associated, YjgA CH48_2122 IPR036059 Metalloprotease TldD/PmbA superfamily CH48_2122 IPR035068 Metalloprotease TldD/PmbA, N-terminal CH48_2122 IPR002510 Metalloprotease TldD/PmbA CH48_2124 IPR009155 Cytochrome b562 CH48_2124 IPR010980 Cytochrome c/b562 CH48_2125 IPR023459 Transcription elongation factor GreA/GreB family CH48_2125 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal CH48_2125 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain CH48_2125 IPR028625 Regulator of nucleoside diphosphate kinase CH48_2125 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily CH48_2131 IPR006680 Amidohydrolase-related CH48_2131 IPR020043 Deacetylase Atu3266-like CH48_2131 IPR011059 Metal-dependent hydrolase, composite domain superfamily CH48_2131 IPR032466 Metal-dependent hydrolase CH48_2132 IPR018319 L-seryl-tRNA selenium transferase-like CH48_2132 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CH48_2132 IPR015424 Pyridoxal phosphate-dependent transferase CH48_2132 IPR006337 D-glucosaminate-6-phosphate ammonia lyase DgaE-like CH48_2133 IPR013785 Aldolase-type TIM barrel CH48_2133 IPR010763 2-dehydro-3-deoxy-phosphogluconate aldolase CH48_2134 IPR015943 WD40/YVTN repeat-like-containing domain superfamily CH48_2134 IPR019405 Lactonase, 7-bladed beta propeller CH48_2134 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily CH48_2135 IPR036390 Winged helix DNA-binding domain superfamily CH48_2135 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_2135 IPR013011 Phosphotransferase system, EIIB component, type 2 CH48_2135 IPR007737 Mga helix-turn-helix domain CH48_2135 IPR036095 PTS system IIB component-like superfamily CH48_2135 IPR002178 PTS EIIA type-2 domain CH48_2135 IPR016152 Phosphotransferase/anion transporter CH48_2135 IPR036634 PRD domain superfamily CH48_2135 IPR013196 Helix-turn-helix, type 11 CH48_2135 IPR011608 PRD domain CH48_2136 IPR001387 Cro/C1-type helix-turn-helix domain CH48_2136 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CH48_2136 IPR013430 Toxin-antitoxin system, antidote protein, HigA CH48_2137 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily CH48_2137 IPR007711 Toxin HigB-1 CH48_2138 IPR018303 P-type ATPase, phosphorylation site CH48_2138 IPR008250 P-type ATPase, A domain superfamily CH48_2138 IPR023299 P-type ATPase, cytoplasmic domain N CH48_2138 IPR036412 HAD-like superfamily CH48_2138 IPR004014 Cation-transporting P-type ATPase, N-terminal CH48_2138 IPR023214 HAD superfamily CH48_2138 IPR006415 P-type ATPase, subfamily IIIB CH48_2138 IPR006068 Cation-transporting P-type ATPase, C-terminal CH48_2138 IPR001757 P-type ATPase CH48_2138 IPR023298 P-type ATPase, transmembrane domain superfamily CH48_214 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_214 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CH48_214 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CH48_2140 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CH48_2140 IPR000843 LacI-type HTH domain CH48_2140 IPR012771 Trehalose operon repressor CH48_2140 IPR028082 Periplasmic binding protein-like I CH48_2141 IPR011296 Phosphotransferase system, trehalose-specific IIBC component CH48_2141 IPR013013 Phosphotransferase system, EIIC component, type 1 CH48_2141 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component CH48_2141 IPR001996 Phosphotransferase system, IIB component, type 1 CH48_2141 IPR036878 Glucose permease domain IIB CH48_2141 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site CH48_2141 IPR003352 Phosphotransferase system, EIIC CH48_2142 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) CH48_2142 IPR013780 Glycosyl hydrolase, all-beta CH48_2142 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CH48_2142 IPR012769 Trehalose-6-phosphate hydrolase CH48_2142 IPR017853 Glycoside hydrolase superfamily CH48_2145 IPR025841 Circularly permuted ATP-grasp type 2 CH48_2145 IPR007296 Domain of unknown function DUF403 CH48_2146 IPR016450 Uncharacterised conserved protein UCP005522 CH48_2146 IPR025841 Circularly permuted ATP-grasp type 2 CH48_2147 IPR035959 RutC-like superfamily CH48_2147 IPR006056 RidA family CH48_2147 IPR006175 YjgF/YER057c/UK114 family CH48_2147 IPR019897 RidA, conserved site CH48_2148 IPR002801 Aspartate transcarbamylase regulatory subunit CH48_2148 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily CH48_2148 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal CH48_2148 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal CH48_2148 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily CH48_2149 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily CH48_2149 IPR002082 Aspartate carbamoyltransferase CH48_2149 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain CH48_2149 IPR006130 Aspartate/ornithine carbamoyltransferase CH48_2149 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding CH48_215 IPR032908 Lipid A 1-diphosphate synthase CH48_215 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CH48_215 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily CH48_2151 IPR002114 Phosphotransferase system, HPr serine phosphorylation site CH48_2151 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CH48_2151 IPR035895 HPr-like superfamily CH48_2151 IPR000032 Phosphocarrier protein HPr-like CH48_2152 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_2152 IPR005337 RapZ-like family CH48_2153 IPR002178 PTS EIIA type-2 domain CH48_2153 IPR016152 Phosphotransferase/anion transporter CH48_2153 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN CH48_2154 IPR003489 Ribosome hibernation promoting factor/RaiA CH48_2154 IPR036567 Ribosome hibernation promotion factor-like CH48_2155 IPR007634 RNA polymerase sigma factor 54, DNA-binding CH48_2155 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily CH48_2155 IPR007046 RNA polymerase sigma factor 54, core-binding domain CH48_2155 IPR000394 RNA polymerase sigma factor 54 CH48_2156 IPR003439 ABC transporter-like CH48_2156 IPR003593 AAA+ ATPase domain CH48_2156 IPR017871 ABC transporter, conserved site CH48_2156 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CH48_2156 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_2156 IPR030921 LPS export ABC transporter, ATP-binding protein LptB CH48_2157 IPR014340 Lipopolysaccharide export system protein LptA CH48_2157 IPR005653 Organic solvent tolerance-like, N-terminal CH48_2158 IPR026265 Lipopolysaccharide export system protein LptC CH48_2158 IPR010664 Lipopolysaccharide assembly, LptC-related CH48_2159 IPR010023 KdsC family CH48_2159 IPR036412 HAD-like superfamily CH48_2159 IPR023214 HAD superfamily CH48_216 IPR000064 Endopeptidase, NLPC/P60 domain CH48_216 IPR038765 Papain-like cysteine peptidase superfamily CH48_2160 IPR001347 Sugar isomerase (SIS) CH48_2160 IPR000644 CBS domain CH48_2160 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type CH48_2160 IPR035474 KpsF-like, SIS domain CH48_2161 IPR004837 Sodium/calcium exchanger membrane region CH48_2161 IPR004481 Sodium/potassium/calcium exchanger CH48_2162 IPR017871 ABC transporter, conserved site CH48_2162 IPR003593 AAA+ ATPase domain CH48_2162 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl CH48_2162 IPR003439 ABC transporter-like CH48_2162 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_2163 IPR030802 ABC transporter permease MalE CH48_2163 IPR003453 ABC transport permease subunit MlaE, Proteobacteria CH48_2164 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD CH48_2164 IPR003399 Mce/MlaD CH48_2165 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC CH48_2165 IPR042245 Tgt2/MlaC superfamily CH48_2166 IPR002645 STAS domain CH48_2166 IPR036513 STAS domain superfamily CH48_2167 IPR002634 BolA protein CH48_2167 IPR036065 BolA-like superfamily CH48_2168 IPR036968 Enolpyruvate transferase domain superfamily CH48_2168 IPR001986 Enolpyruvate transferase domain CH48_2168 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta CH48_2168 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase CH48_2169 IPR009003 Peptidase S1, PA clan CH48_2169 IPR001940 Peptidase S1C CH48_2169 IPR001478 PDZ domain CH48_2169 IPR036034 PDZ superfamily CH48_2169 IPR011783 Peptidase S1C, DegS CH48_217 IPR001633 EAL domain CH48_217 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain CH48_217 IPR035919 EAL domain superfamily CH48_2170 IPR009003 Peptidase S1, PA clan CH48_2170 IPR011782 Peptidase S1C, Do CH48_2170 IPR036034 PDZ superfamily CH48_2170 IPR001478 PDZ domain CH48_2170 IPR001940 Peptidase S1C CH48_2171 IPR009386 Protein of unknown function DUF1043 CH48_2172 IPR005654 ATPase, AFG1-like CH48_2172 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_2172 IPR030870 Cell division protein ZapE CH48_2173 IPR023563 Ribosomal protein L13, conserved site CH48_2173 IPR036899 Ribosomal protein L13 superfamily CH48_2173 IPR005822 Ribosomal protein L13 CH48_2173 IPR005823 Ribosomal protein L13, bacterial-type CH48_2174 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CH48_2174 IPR000754 Ribosomal protein S9 CH48_2174 IPR023035 Ribosomal protein S9, bacterial/plastid CH48_2174 IPR020574 Ribosomal protein S9, conserved site CH48_2174 IPR020568 Ribosomal protein S5 domain 2-type fold CH48_2175 IPR036249 Thioredoxin-like superfamily CH48_2175 IPR034341 Stringent starvation protein A, N-terminal CH48_2175 IPR040079 Glutathione Transferase family CH48_2175 IPR004045 Glutathione S-transferase, N-terminal CH48_2175 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CH48_2175 IPR004046 Glutathione S-transferase, C-terminal CH48_2175 IPR010987 Glutathione S-transferase, C-terminal-like CH48_2176 IPR036760 SspB-like superfamily CH48_2176 IPR007481 Stringent starvation protein B CH48_2178 IPR009051 Alpha-helical ferredoxin CH48_2178 IPR036188 FAD/NAD(P)-binding domain superfamily CH48_2178 IPR028261 Dihydroprymidine dehydrogenase domain II CH48_2178 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 CH48_2178 IPR023753 FAD/NAD(P)-binding domain CH48_2178 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CH48_2179 IPR002489 Glutamate synthase, alpha subunit, C-terminal CH48_2179 IPR029055 Nucleophile aminohydrolases, N-terminal CH48_2179 IPR006982 Glutamate synthase, central-N CH48_2179 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily CH48_2179 IPR013785 Aldolase-type TIM barrel CH48_2179 IPR017932 Glutamine amidotransferase type 2 domain CH48_2179 IPR002932 Glutamate synthase domain CH48_218 IPR030678 Peptide/nickel binding protein, MppA-type CH48_218 IPR039424 Solute-binding protein family 5 CH48_218 IPR000914 Solute-binding protein family 5 domain CH48_2180 IPR032432 Radical SAM, C-terminal extension CH48_2180 IPR007197 Radical SAM CH48_2180 IPR039661 ELP3/YhcC CH48_2180 IPR006638 Elp3/MiaB/NifB CH48_2180 IPR005911 Protein YhcC-like CH48_2180 IPR023404 Radical SAM, alpha/beta horseshoe CH48_2181 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CH48_2181 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily CH48_2181 IPR011006 CheY-like superfamily CH48_2181 IPR035965 PAS domain superfamily CH48_2181 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CH48_2181 IPR000700 PAS-associated, C-terminal CH48_2181 IPR000014 PAS domain CH48_2181 IPR036641 HPT domain superfamily CH48_2181 IPR040642 Histidine kinase receptor ArcB, transmembrane domain CH48_2181 IPR005467 Histidine kinase domain CH48_2181 IPR003594 Histidine kinase/HSP90-like ATPase CH48_2181 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CH48_2181 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH48_2181 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CH48_2181 IPR001789 Signal transduction response regulator, receiver domain CH48_2181 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB CH48_2181 IPR013767 PAS fold CH48_2182 IPR026041 Glyoxalase ElbB CH48_2182 IPR029062 Class I glutamine amidotransferase-like CH48_2183 IPR011812 Biosynthetic peptidoglycan transglycosylase CH48_2183 IPR036950 Penicillin binding protein transglycosylase domain CH48_2183 IPR023346 Lysozyme-like domain superfamily CH48_2183 IPR001264 Glycosyl transferase, family 51 CH48_2184 IPR007055 BON domain CH48_2184 IPR014004 Transport-associated and nodulation domain, bacteria CH48_2185 IPR001347 Sugar isomerase (SIS) CH48_2185 IPR035461 GmhA/DiaA CH48_2185 IPR023070 DnaA initiator-associating protein CH48_2186 IPR011856 tRNA endonuclease-like domain superfamily CH48_2186 IPR011335 Restriction endonuclease type II-like CH48_2186 IPR003509 Uncharacterised protein family UPF0102 CH48_2187 IPR028082 Periplasmic binding protein-like I CH48_2187 IPR011990 Tetratricopeptide-like helical domain superfamily CH48_2187 IPR007443 Penicillin-binding protein activator LpoA CH48_2188 IPR000878 Tetrapyrrole methylase CH48_2188 IPR014776 Tetrapyrrole methylase, subdomain 2 CH48_2188 IPR014777 Tetrapyrrole methylase, subdomain 1 CH48_2188 IPR008189 rRNA small subunit methyltransferase I CH48_2188 IPR018063 SAM-dependent methyltransferase RsmI, conserved site CH48_2188 IPR035996 Tetrapyrrole methylase superfamily CH48_219 IPR035906 MetI-like superfamily CH48_219 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CH48_2190 IPR013783 Immunoglobulin-like fold CH48_2190 IPR008962 PapD-like superfamily CH48_2190 IPR001829 Pili assembly chaperone, bacterial CH48_2190 IPR016148 Pili assembly chaperone, C-terminal CH48_2190 IPR018046 Pili assembly chaperone, conserved site CH48_2190 IPR036316 Pili assembly chaperone, C-terminal domain superfamily CH48_2190 IPR016147 Pili assembly chaperone, N-terminal CH48_2191 IPR025949 PapC-like, C-terminal domain CH48_2191 IPR000015 Outer membrane usher protein CH48_2191 IPR018030 Fimbrial membrane usher, conserved site CH48_2191 IPR037224 PapC, N-terminal domain superfamily CH48_2191 IPR025885 PapC, N-terminal domain CH48_2191 IPR042186 Outer membrane usher protein FimD, plug domain CH48_2193 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_2193 IPR036390 Winged helix DNA-binding domain superfamily CH48_2193 IPR005119 LysR, substrate-binding CH48_2193 IPR000847 Transcription regulator HTH, LysR CH48_2194 IPR020471 Aldo/keto reductase CH48_2194 IPR023210 NADP-dependent oxidoreductase domain CH48_2194 IPR036812 NADP-dependent oxidoreductase domain superfamily CH48_2195 IPR020843 Polyketide synthase, enoylreductase domain CH48_2195 IPR036291 NAD(P)-binding domain superfamily CH48_2195 IPR013154 Alcohol dehydrogenase, N-terminal CH48_2195 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CH48_2195 IPR011032 GroES-like superfamily CH48_2195 IPR013149 Alcohol dehydrogenase, C-terminal CH48_2196 IPR003829 Pirin, N-terminal domain CH48_2196 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain CH48_2196 IPR014710 RmlC-like jelly roll fold CH48_2196 IPR011051 RmlC-like cupin domain superfamily CH48_2196 IPR012093 Pirin CH48_2197 IPR036390 Winged helix DNA-binding domain superfamily CH48_2197 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_2197 IPR000847 Transcription regulator HTH, LysR CH48_2197 IPR005119 LysR, substrate-binding CH48_2198 IPR010987 Glutathione S-transferase, C-terminal-like CH48_2198 IPR036249 Thioredoxin-like superfamily CH48_2198 IPR016639 Glutathione S-transferase Omega/GSH CH48_2198 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CH48_2198 IPR040079 Glutathione Transferase family CH48_2198 IPR004045 Glutathione S-transferase, N-terminal CH48_2199 IPR032808 DoxX family CH48_22 IPR041929 Tetrathionate reductase subunit A, N-terminal CH48_22 IPR006656 Molybdopterin oxidoreductase CH48_22 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CH48_22 IPR006657 Molybdopterin dinucleotide-binding domain CH48_22 IPR037946 Tetrathionate reductase subunit A, MopB domain CH48_22 IPR009010 Aspartate decarboxylase-like domain superfamily CH48_220 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CH48_220 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CH48_220 IPR035906 MetI-like superfamily CH48_2200 IPR025612 YqjK-like protein CH48_2201 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III CH48_2202 IPR010279 Inner membrane protein YqjD/ElaB CH48_2204 IPR027398 SecD export protein N-terminal TM domain CH48_2204 IPR026574 Modulator protein MzrA CH48_2205 IPR032818 DedA family CH48_2205 IPR032816 SNARE associated Golgi protein CH48_2207 IPR008920 Transcription regulator FadR/GntR, C-terminal CH48_2207 IPR036390 Winged helix DNA-binding domain superfamily CH48_2207 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_2207 IPR011711 GntR, C-terminal CH48_2207 IPR000524 Transcription regulator HTH, GntR CH48_2208 IPR011701 Major facilitator superfamily CH48_2208 IPR020846 Major facilitator superfamily domain CH48_2208 IPR036259 MFS transporter superfamily CH48_2209 IPR003766 Uronate isomerase CH48_2209 IPR032466 Metal-dependent hydrolase CH48_221 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_221 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CH48_221 IPR017871 ABC transporter, conserved site CH48_221 IPR003439 ABC transporter-like CH48_221 IPR003593 AAA+ ATPase domain CH48_2210 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CH48_2210 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CH48_2210 IPR036291 NAD(P)-binding domain superfamily CH48_2210 IPR013131 Mannitol dehydrogenase, N-terminal CH48_2210 IPR013118 Mannitol dehydrogenase, C-terminal CH48_2210 IPR023668 Altronate oxidoreductase CH48_2211 IPR007392 D-galactarate/Altronate dehydratase, C-terminal CH48_2211 IPR013974 SAF domain CH48_2212 IPR019629 Uncharacterised protein family HI1736/YgjV CH48_2212 IPR026267 Inner membrane protein YgjV CH48_2213 IPR001991 Sodium:dicarboxylate symporter CH48_2213 IPR023025 Serine/threonine transporter SstT CH48_2213 IPR036458 Sodium:dicarboxylate symporter superfamily CH48_2214 IPR005496 Integral membrane protein TerC CH48_2214 IPR022369 Integral membrane protein TerC, riboswitch-linked CH48_2215 IPR036291 NAD(P)-binding domain superfamily CH48_2215 IPR000683 Oxidoreductase, N-terminal CH48_2216 IPR002725 Protein of unknown function DUF45 CH48_2218 IPR036709 Autotransporter beta-domain superfamily CH48_2218 IPR005546 Autotransporter beta-domain CH48_2218 IPR006315 Outer membrane autotransporter barrel CH48_2218 IPR011050 Pectin lyase fold/virulence factor CH48_2219 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD CH48_2219 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH48_2219 IPR007848 Methyltransferase small domain CH48_2219 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CH48_222 IPR020489 Uncharacterised protein family YejG CH48_2221 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal CH48_2221 IPR023753 FAD/NAD(P)-binding domain CH48_2221 IPR036188 FAD/NAD(P)-binding domain superfamily CH48_2221 IPR013785 Aldolase-type TIM barrel CH48_2222 IPR000620 EamA domain CH48_2223 IPR005325 Protein of unknown function DUF308, membrane CH48_2225 IPR010107 Glutamate decarboxylase CH48_2225 IPR021115 Pyridoxal-phosphate binding site CH48_2225 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CH48_2225 IPR015424 Pyridoxal phosphate-dependent transferase CH48_2225 IPR002129 Pyridoxal phosphate-dependent decarboxylase CH48_2226 IPR002293 Amino acid/polyamine transporter I CH48_2227 IPR015868 Glutaminase CH48_2227 IPR012338 Beta-lactamase/transpeptidase-like CH48_2228 IPR001996 Phosphotransferase system, IIB component, type 1 CH48_2228 IPR003352 Phosphotransferase system, EIIC CH48_2228 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site CH48_2228 IPR013013 Phosphotransferase system, EIIC component, type 1 CH48_2228 IPR036878 Glucose permease domain IIB CH48_2229 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ CH48_2229 IPR040190 N-acetylmuramic acid 6-phosphate etherase/glucokinase regulatory protein CH48_2229 IPR000408 Regulator of chromosome condensation, RCC1 CH48_2229 IPR005486 Glucokinase regulatory protein, conserved site CH48_2229 IPR001347 Sugar isomerase (SIS) CH48_223 IPR020846 Major facilitator superfamily domain CH48_223 IPR011701 Major facilitator superfamily CH48_223 IPR036259 MFS transporter superfamily CH48_223 IPR004734 Multidrug resistance protein CH48_223 IPR004812 Drug resistance transporter Bcr/CmlA subfamily CH48_2230 IPR000281 Helix-turn-helix protein RpiR CH48_2230 IPR035472 RpiR-like, SIS domain CH48_2230 IPR001347 Sugar isomerase (SIS) CH48_2230 IPR009057 Homeobox-like domain superfamily CH48_2230 IPR022821 Transcription regulator HTH, MurR CH48_2230 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_2231 IPR019800 Glycoside hydrolase, family 3, active site CH48_2231 IPR002772 Glycoside hydrolase family 3 C-terminal domain CH48_2231 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily CH48_2231 IPR001764 Glycoside hydrolase, family 3, N-terminal CH48_2231 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily CH48_2231 IPR017853 Glycoside hydrolase superfamily CH48_2233 IPR008302 Uncharacterised conserved protein UCP016719 CH48_2236 IPR007627 RNA polymerase sigma-70 region 2 CH48_2236 IPR009042 RNA polymerase sigma-70 region 1.2 CH48_2236 IPR007624 RNA polymerase sigma-70 region 3 CH48_2236 IPR007630 RNA polymerase sigma-70 region 4 CH48_2236 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_2236 IPR028630 RNA polymerase sigma factor RpoD CH48_2236 IPR012760 RNA polymerase sigma factor RpoD, C-terminal CH48_2236 IPR013324 RNA polymerase sigma factor, region 3/4-like CH48_2236 IPR014284 RNA polymerase sigma-70 like domain CH48_2236 IPR013325 RNA polymerase sigma factor, region 2 CH48_2236 IPR042189 Sigma-70 factor, region 1.1 superfamily CH48_2236 IPR007127 RNA polymerase sigma factor 70, region 1.1 CH48_2236 IPR007631 RNA polymerase sigma factor 70, non-essential domain CH48_2236 IPR000943 RNA polymerase sigma-70 CH48_2237 IPR002694 Zinc finger, CHC2-type CH48_2237 IPR006171 TOPRIM domain CH48_2237 IPR034151 Bacterial DnaG primase, TOPRIM domain CH48_2237 IPR013264 DNA primase, catalytic core, N-terminal CH48_2237 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily CH48_2237 IPR030846 DNA primase DnaG, bacteria CH48_2237 IPR006295 DNA primase, DnaG CH48_2237 IPR013173 DNA primase DnaG, DnaB-binding domain CH48_2237 IPR036977 DNA Primase, CHC2-type zinc finger CH48_2237 IPR019475 DNA primase, DnaB-helicase binding domain CH48_2237 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CH48_2238 IPR038380 Ribosomal protein S21 superfamily CH48_2238 IPR001911 Ribosomal protein S21 CH48_2238 IPR018278 Ribosomal protein S21, conserved site CH48_2239 IPR017861 Kae1/TsaD family CH48_2239 IPR017860 Peptidase M22, conserved site CH48_2239 IPR000905 Gcp-like domain CH48_2239 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD CH48_224 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F CH48_224 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site CH48_224 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain CH48_224 IPR002942 RNA-binding S4 domain CH48_224 IPR020103 Pseudouridine synthase, catalytic domain superfamily CH48_224 IPR006145 Pseudouridine synthase, RsuA/RluA CH48_224 IPR036986 RNA-binding S4 domain superfamily CH48_2240 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY CH48_2241 IPR006156 Dihydroneopterin aldolase CH48_2241 IPR006157 Dihydroneopterin aldolase/epimerase domain CH48_2242 IPR003824 Undecaprenyl-diphosphatase UppP CH48_2243 IPR003607 HD/PDEase domain CH48_2243 IPR012006 tRNA nucleotidyltransferase, proteobacteria CH48_2243 IPR006674 HD domain CH48_2243 IPR002646 Poly A polymerase, head domain CH48_2243 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain CH48_2244 IPR003646 SH3-like domain, bacterial-type CH48_2244 IPR016476 SH3 domain protein CH48_2245 IPR007899 CHAD domain CH48_2245 IPR033469 CYTH-like domain superfamily CH48_2245 IPR039013 Inorganic triphosphatase YgiF CH48_2245 IPR023577 CYTH domain CH48_2246 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain CH48_2246 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase CH48_2246 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme CH48_2247 IPR011611 Carbohydrate kinase PfkB CH48_2247 IPR023030 Bifunctional protein HldE CH48_2247 IPR029056 Ribokinase-like CH48_2247 IPR011913 RfaE bifunctional protein, domain I CH48_2247 IPR011914 RfaE bifunctional protein, domain II CH48_2247 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CH48_2247 IPR004821 Cytidyltransferase-like domain CH48_2247 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH48_2248 IPR002293 Amino acid/polyamine transporter I CH48_2249 IPR007475 Ubiquinone biosynthesis accessory factor UbiK CH48_225 IPR011332 Zinc-binding ribosomal protein CH48_225 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_225 IPR001650 Helicase, C-terminal CH48_225 IPR014001 Helicase superfamily 1/2, ATP-binding domain CH48_225 IPR006935 Helicase/UvrB, N-terminal CH48_2250 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily CH48_2250 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB CH48_2251 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B CH48_2251 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type CH48_2252 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain CH48_2252 IPR016185 Pre-ATP-grasp domain superfamily CH48_2253 IPR009576 Biofilm formation YgiB CH48_2254 IPR003423 Outer membrane efflux protein CH48_2254 IPR010130 Type I secretion outer membrane protein, TolC CH48_2255 IPR000086 NUDIX hydrolase domain CH48_2255 IPR004385 Nucleoside diphosphate pyrophosphatase CH48_2255 IPR015797 NUDIX hydrolase-like domain superfamily CH48_2255 IPR020084 NUDIX hydrolase, conserved site CH48_2256 IPR009659 Protein of unknown function DUF1249 CH48_2257 IPR029052 Metallo-dependent phosphatase-like CH48_2257 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA CH48_2257 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CH48_2258 IPR029058 Alpha/Beta hydrolase fold CH48_2258 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA CH48_2259 IPR006171 TOPRIM domain CH48_2259 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative CH48_2259 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CH48_2259 IPR003594 Histidine kinase/HSP90-like ATPase CH48_2259 IPR018522 DNA topoisomerase, type IIA, conserved site CH48_2259 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 CH48_2259 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH48_2259 IPR020568 Ribosomal protein S5 domain 2-type fold CH48_2259 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal CH48_2259 IPR002288 DNA gyrase B subunit, C-terminal CH48_2259 IPR013760 DNA topoisomerase, type IIA-like domain superfamily CH48_2259 IPR001241 DNA topoisomerase, type IIA CH48_226 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal CH48_226 IPR029751 Ribosomal protein L25 CH48_226 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily CH48_226 IPR020055 Ribosomal protein L25, short-form CH48_2260 IPR000847 Transcription regulator HTH, LysR CH48_2260 IPR036390 Winged helix DNA-binding domain superfamily CH48_2260 IPR005119 LysR, substrate-binding CH48_2260 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_2261 IPR011008 Dimeric alpha-beta barrel CH48_2261 IPR007138 Antibiotic biosynthesis monooxygenase domain CH48_2262 IPR003680 Flavodoxin-like fold CH48_2262 IPR029039 Flavoprotein-like superfamily CH48_2263 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat CH48_2263 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal CH48_2263 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative CH48_2263 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta CH48_2263 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CH48_2263 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily CH48_2263 IPR013760 DNA topoisomerase, type IIA-like domain superfamily CH48_2264 IPR002123 Phospholipid/glycerol acyltransferase CH48_2264 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase CH48_2265 IPR006311 Twin-arginine translocation pathway, signal sequence CH48_2265 IPR008972 Cupredoxin CH48_2265 IPR011707 Multicopper oxidase, type 3 CH48_2265 IPR026589 Cell division protein FtsP CH48_2265 IPR011706 Multicopper oxidase, type 2 CH48_2266 IPR023404 Radical SAM, alpha/beta horseshoe CH48_2266 IPR013704 Uncharacterised protein family UPF0313, N-terminal CH48_2266 IPR020612 Methylthiotransferase, conserved site CH48_2266 IPR006638 Elp3/MiaB/NifB CH48_2266 IPR022946 Uncharacterised protein family UPF0313 CH48_2266 IPR024560 Uncharacterised protein family UPF0313, C-terminal CH48_2266 IPR007197 Radical SAM CH48_2267 IPR023210 NADP-dependent oxidoreductase domain CH48_2267 IPR018170 Aldo/keto reductase, conserved site CH48_2267 IPR036812 NADP-dependent oxidoreductase domain superfamily CH48_2267 IPR020471 Aldo/keto reductase CH48_2268 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA CH48_2268 IPR018211 Alcohol dehydrogenase, iron-type, conserved site CH48_2269 IPR009594 Transcription regulator HTH, AraC, N-terminal CH48_2269 IPR009057 Homeobox-like domain superfamily CH48_2269 IPR018060 DNA binding HTH domain, AraC-type CH48_227 IPR007358 Nucleoid-associated protein NdpA CH48_2270 IPR032816 SNARE associated Golgi protein CH48_2270 IPR032818 DedA family CH48_2271 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme CH48_2271 IPR006233 Cystathionine beta-lyase, bacterial CH48_2271 IPR015424 Pyridoxal phosphate-dependent transferase CH48_2271 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CH48_2271 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CH48_2272 IPR014164 TonB-system energizer ExbB type-1 CH48_2272 IPR002898 MotA/TolQ/ExbB proton channel CH48_2273 IPR003400 Biopolymer transport protein ExbD/TolR CH48_2273 IPR014170 TonB system transport protein ExbD type-1 CH48_228 IPR023202 YejL-like superfamily CH48_228 IPR009857 Uncharacterised protein family UPF0352 CH48_2280 IPR001482 Type II/IV secretion system protein CH48_2280 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_2280 IPR022399 Helicase/secretion neighbourhood ATPase CH48_2283 IPR014004 Transport-associated and nodulation domain, bacteria CH48_2283 IPR032789 Pilus formation protein, N-terminal CH48_2283 IPR004846 Type II/III secretion system CH48_2283 IPR001775 GspD/PilQ family CH48_2283 IPR007055 BON domain CH48_2288 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily CH48_2288 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like CH48_2288 IPR005123 Oxoglutarate/iron-dependent dioxygenase CH48_2288 IPR004574 Alkylated DNA repair protein AlkB CH48_2289 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CH48_2289 IPR001036 Acriflavin resistance protein CH48_2289 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA CH48_229 IPR012159 Inner membrane protein YejM CH48_229 IPR000917 Sulfatase, N-terminal CH48_229 IPR024588 Inner membrane protein YejM, N-terminal CH48_229 IPR017850 Alkaline-phosphatase-like, core domain superfamily CH48_2292 IPR009057 Homeobox-like domain superfamily CH48_2292 IPR018060 DNA binding HTH domain, AraC-type CH48_2292 IPR018062 HTH domain AraC-type, conserved site CH48_2292 IPR020449 Transcription regulator HTH, AraC- type CH48_2297 IPR025857 MacB-like periplasmic core domain CH48_2297 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_2297 IPR003593 AAA+ ATPase domain CH48_2297 IPR003838 ABC transporter permease protein domain CH48_2297 IPR017871 ABC transporter, conserved site CH48_2297 IPR003439 ABC transporter-like CH48_2297 IPR017911 ABC transporter, macrolide export, ATP-binding domain CH48_2298 IPR009057 Homeobox-like domain superfamily CH48_2298 IPR020449 Transcription regulator HTH, AraC- type CH48_2298 IPR018060 DNA binding HTH domain, AraC-type CH48_2298 IPR018062 HTH domain AraC-type, conserved site CH48_2301 IPR000801 Putative esterase CH48_2301 IPR029058 Alpha/Beta hydrolase fold CH48_2301 IPR021764 Enterochelin esterase, N-terminal CH48_2301 IPR013783 Immunoglobulin-like fold CH48_2301 IPR014756 Immunoglobulin E-set CH48_2302 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_2302 IPR017871 ABC transporter, conserved site CH48_2302 IPR003593 AAA+ ATPase domain CH48_2302 IPR003439 ABC transporter-like CH48_2303 IPR037294 ABC transporter, BtuC-like CH48_2303 IPR000522 ABC transporter, permease protein, BtuC-like CH48_2304 IPR000522 ABC transporter, permease protein, BtuC-like CH48_2304 IPR037294 ABC transporter, BtuC-like CH48_2305 IPR002491 ABC transporter periplasmic binding domain CH48_2306 IPR020846 Major facilitator superfamily domain CH48_2306 IPR036259 MFS transporter superfamily CH48_2306 IPR011701 Major facilitator superfamily CH48_2307 IPR036291 NAD(P)-binding domain superfamily CH48_2307 IPR001509 NAD-dependent epimerase/dehydratase CH48_2308 IPR003660 HAMP domain CH48_2308 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily CH48_2308 IPR004090 Chemotaxis methyl-accepting receptor CH48_2308 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CH48_2308 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding CH48_2308 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CH48_2310 IPR001712 Type III secretion system FHIPEP CH48_2310 IPR006301 Flagellar biosynthesis protein FlhA CH48_2310 IPR042193 FHIPEP, domain 3 CH48_2310 IPR025505 FHIPEP conserved site CH48_2310 IPR042196 FHIPEP, domain 4 CH48_2310 IPR042194 FHIPEP, domain 1 CH48_2311 IPR006136 Flagellar biosynthetic protein FlhB CH48_2311 IPR029025 Type III secretion system substrate exporter, C-terminal CH48_2311 IPR006135 Type III secretion system substrate exporter CH48_2312 IPR006303 Flagellar biosynthesis protein FliR CH48_2312 IPR002010 Type III secretion system inner membrane R protein CH48_2313 IPR002191 Bacterial export protein family 3 CH48_2313 IPR006305 Flagellar biosynthesis protein FliQ CH48_2314 IPR005837 Flagellar transport protein FliP CH48_2314 IPR005838 Type III secretion system inner membrane P protein CH48_2315 IPR012826 Flagellar motor switch FliN CH48_2315 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb CH48_2315 IPR036429 SpoA-like superfamily CH48_2315 IPR001543 Surface presentation of antigen (SpoA) CH48_2317 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_2317 IPR001789 Signal transduction response regulator, receiver domain CH48_2317 IPR002078 RNA polymerase sigma factor 54 interaction domain CH48_2317 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CH48_2317 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CH48_2317 IPR025944 Sigma-54 interaction domain, conserved site CH48_2317 IPR011006 CheY-like superfamily CH48_2317 IPR003593 AAA+ ATPase domain CH48_2317 IPR009057 Homeobox-like domain superfamily CH48_2317 IPR002197 DNA binding HTH domain, Fis-type CH48_2318 IPR001624 Flagellar hook-basal body complex protein FliE CH48_2319 IPR000067 Flagellar M-ring protein FliF CH48_2319 IPR013556 Flagellar M-ring C-terminal CH48_2319 IPR006182 Secretory protein YscJ/FliF CH48_2322 IPR003593 AAA+ ATPase domain CH48_2322 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site CH48_2322 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CH48_2322 IPR032463 ATPase, type III secretion system, FliI CH48_2322 IPR005714 ATPase, type III secretion system, FliI/YscN CH48_2322 IPR020005 Flagellar export ATPase FliI, clade 1 CH48_2322 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_2322 IPR040627 T3SS EscN ATPase, C-terminal CH48_2328 IPR019776 Flagellar basal body rod protein, conserved site CH48_2328 IPR006300 Flagellar basal-body rod protein FlgB CH48_2328 IPR001444 Flagellar basal body rod protein, N-terminal CH48_2329 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CH48_2329 IPR019776 Flagellar basal body rod protein, conserved site CH48_2329 IPR001444 Flagellar basal body rod protein, N-terminal CH48_2329 IPR006299 Flagellar basal-body rod protein FlgC CH48_233 IPR001207 Transposase, mutator type CH48_2330 IPR025963 FlgD Tudor-like domain CH48_2330 IPR005648 Flagellar hook capping protein CH48_2330 IPR025965 FlgD Ig-like domain CH48_2331 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CH48_2331 IPR020013 Flagellar hook-basal body protein, FlgE/F/G CH48_2331 IPR001444 Flagellar basal body rod protein, N-terminal CH48_2331 IPR037058 Flagellar hook protein FlgE superfamily CH48_2331 IPR011491 Flagellar hook protein FlgE CH48_2331 IPR019776 Flagellar basal body rod protein, conserved site CH48_2331 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like CH48_2332 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CH48_2332 IPR020013 Flagellar hook-basal body protein, FlgE/F/G CH48_2332 IPR019776 Flagellar basal body rod protein, conserved site CH48_2332 IPR001444 Flagellar basal body rod protein, N-terminal CH48_2332 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like CH48_2333 IPR001444 Flagellar basal body rod protein, N-terminal CH48_2333 IPR019776 Flagellar basal body rod protein, conserved site CH48_2333 IPR020013 Flagellar hook-basal body protein, FlgE/F/G CH48_2333 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CH48_2333 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like CH48_2333 IPR012834 Flagellar basal-body rod FlgG CH48_2334 IPR000527 Flagellar L-ring protein CH48_2335 IPR001782 Flagellar P-ring protein CH48_2341 IPR040970 CadC C-terminal domain 1 CH48_2341 IPR039420 Transcriptional regulatory protein WalR-like CH48_2341 IPR011990 Tetratricopeptide-like helical domain superfamily CH48_2341 IPR016032 Signal transduction response regulator, C-terminal effector CH48_2341 IPR001867 OmpR/PhoB-type DNA-binding domain CH48_2341 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_2342 IPR001029 Flagellin, D0/D1 domain CH48_2342 IPR042187 Flagellin, C-terminal domain, subdomain 2 CH48_2342 IPR001492 Flagellin CH48_2343 IPR040026 Flagellar hook-associated protein 2 CH48_2343 IPR010809 Flagellar hook-associated protein 2, C-terminal CH48_2343 IPR003481 Flagellar hook-associated protein 2, N-terminal CH48_2343 IPR010810 Flagellin hook, IN motif CH48_2344 IPR036584 Flagellar protein FliS superfamily CH48_2344 IPR003713 Flagellar protein FliS CH48_2348 IPR000943 RNA polymerase sigma-70 CH48_2348 IPR013324 RNA polymerase sigma factor, region 3/4-like CH48_2348 IPR014284 RNA polymerase sigma-70 like domain CH48_2348 IPR007627 RNA polymerase sigma-70 region 2 CH48_2348 IPR007630 RNA polymerase sigma-70 region 4 CH48_2348 IPR013325 RNA polymerase sigma factor, region 2 CH48_2348 IPR012845 RNA polymerase sigma factor, FliA/WhiG CH48_2349 IPR002898 MotA/TolQ/ExbB proton channel CH48_2349 IPR022522 Flagellar motor stator, MotA CH48_2349 IPR000540 Flagellar motor protein MotA, conserved site CH48_235 IPR002514 Transposase IS3/IS911family CH48_235 IPR009057 Homeobox-like domain superfamily CH48_2350 IPR036737 OmpA-like domain superfamily CH48_2350 IPR006665 OmpA-like domain CH48_2350 IPR025713 Motility protein B, N-terminal domain CH48_2351 IPR008816 Glycine zipper 2TM domain CH48_2353 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily CH48_2353 IPR006311 Twin-arginine translocation pathway, signal sequence CH48_2353 IPR037148 [NiFe]-hydrogenase, small subunit, C-terminal domain superfamily CH48_2353 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit CH48_2353 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CH48_2353 IPR001821 [NiFe]-hydrogenase, small subunit CH48_2353 IPR027394 Cytochrome-c3 hydrogenase, C-terminal CH48_2354 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CH48_2354 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CH48_2354 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CH48_2355 IPR005614 NrfD family CH48_2356 IPR029014 [NiFe]-hydrogenase, large subunit CH48_2356 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site CH48_2356 IPR001501 Nickel-dependent hydrogenase, large subunit CH48_2357 IPR000671 Peptidase A31 family CH48_2357 IPR023430 Peptidase HybD-like domain superfamily CH48_2357 IPR004419 Peptidase A31, hydrogenase expression/formation protein CH48_2358 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE CH48_2358 IPR038530 [NiFe]-hydrogenase assembly, chaperone, HybE superfamily CH48_2359 IPR000688 Hydrogenase maturation factor HypA/HybF CH48_2359 IPR039002 Hydrogenase maturation factor HybF CH48_2359 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site CH48_236 IPR038965 Transposase InsF-like CH48_2360 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CH48_2360 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_2360 IPR004392 Hydrogenase maturation factor HypB CH48_2361 IPR037254 HupF/HypC superfamily CH48_2361 IPR019812 Hydrogenase assembly chaperone, conserved site CH48_2361 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CH48_2362 IPR002780 Hydrogenase formation HypD protein CH48_2362 IPR042243 HypD, domain 2 CH48_2362 IPR042244 HypD, domain 1 CH48_2363 IPR016188 PurM-like, N-terminal domain CH48_2363 IPR010918 PurM-like, C-terminal domain CH48_2363 IPR011854 Carbamoyl dehydratase HypE CH48_2363 IPR036676 PurM-like, C-terminal domain superfamily CH48_2363 IPR036921 PurM-like, N-terminal domain superfamily CH48_2364 IPR001792 Acylphosphatase-like domain CH48_2364 IPR006070 YrdC-like domain CH48_2364 IPR036046 Acylphosphatase-like domain superfamily CH48_2364 IPR041440 HypF, Kae1-like domain CH48_2364 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily CH48_2364 IPR011125 Zinc finger, HypF-type CH48_2364 IPR004421 Carbamoyltransferase, HypF-type CH48_2364 IPR017968 Acylphosphatase, conserved site CH48_2365 IPR040198 Fido domain-containing protein CH48_2365 IPR036597 Fido-like domain superfamily CH48_2365 IPR025758 Fic/DOC N-terminal CH48_2365 IPR026287 Protein adenylyltransferase SoFic-like CH48_2365 IPR003812 Fido domain CH48_2366 IPR029056 Ribokinase-like CH48_2366 IPR000417 Hydroxyethylthiazole kinase CH48_2368 IPR013655 PAS fold-3 CH48_2368 IPR013656 PAS fold-4 CH48_2368 IPR001633 EAL domain CH48_2368 IPR035965 PAS domain superfamily CH48_2368 IPR000700 PAS-associated, C-terminal CH48_2368 IPR000014 PAS domain CH48_2368 IPR001610 PAC motif CH48_2368 IPR029787 Nucleotide cyclase CH48_2368 IPR035919 EAL domain superfamily CH48_2368 IPR000160 GGDEF domain CH48_2369 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CH48_2369 IPR006143 RND efflux pump, membrane fusion protein CH48_2369 IPR022824 Multidrug resistance protein MdtA CH48_2370 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 CH48_2370 IPR001036 Acriflavin resistance protein CH48_2370 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CH48_2372 IPR015041 Osmosensory transporter coiled coil CH48_2372 IPR020846 Major facilitator superfamily domain CH48_2372 IPR005829 Sugar transporter, conserved site CH48_2372 IPR005828 Major facilitator, sugar transporter-like CH48_2372 IPR036259 MFS transporter superfamily CH48_2372 IPR004736 MFS transporter, metabolite:H symporter CH48_2372 IPR036292 Proline/betaine transporter ProP, C-terminal CH48_2375 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein CH48_2375 IPR003841 Sodium-dependent phosphate transport protein CH48_2376 IPR023186 Inosine/uridine-preferring nucleoside hydrolase CH48_2376 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CH48_2376 IPR022976 Non-specific ribonucleoside hydrolase RihC CH48_2376 IPR036452 Ribonucleoside hydrolase-like CH48_2377 IPR000843 LacI-type HTH domain CH48_2377 IPR028082 Periplasmic binding protein-like I CH48_2377 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CH48_2378 IPR004736 MFS transporter, metabolite:H symporter CH48_2378 IPR036259 MFS transporter superfamily CH48_2378 IPR005828 Major facilitator, sugar transporter-like CH48_2378 IPR020846 Major facilitator superfamily domain CH48_2378 IPR011701 Major facilitator superfamily CH48_2379 IPR036390 Winged helix DNA-binding domain superfamily CH48_2379 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_2379 IPR000524 Transcription regulator HTH, GntR CH48_2379 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CH48_2379 IPR015424 Pyridoxal phosphate-dependent transferase CH48_2381 IPR000620 EamA domain CH48_2384 IPR033870 FatB domain CH48_2384 IPR002491 ABC transporter periplasmic binding domain CH48_2385 IPR037294 ABC transporter, BtuC-like CH48_2385 IPR000522 ABC transporter, permease protein, BtuC-like CH48_2386 IPR000522 ABC transporter, permease protein, BtuC-like CH48_2386 IPR037294 ABC transporter, BtuC-like CH48_2387 IPR003593 AAA+ ATPase domain CH48_2387 IPR003439 ABC transporter-like CH48_2387 IPR017871 ABC transporter, conserved site CH48_2387 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_2388 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 CH48_2388 IPR001714 Peptidase M24, methionine aminopeptidase CH48_2388 IPR000994 Peptidase M24 CH48_2388 IPR036005 Creatinase/aminopeptidase-like CH48_239 IPR001148 Alpha carbonic anhydrase domain CH48_239 IPR041891 Carbonic anhydrase, prokaryotic-like CH48_239 IPR036398 Alpha carbonic anhydrase domain superfamily CH48_239 IPR023561 Carbonic anhydrase, alpha-class CH48_239 IPR018338 Carbonic anhydrase, alpha-class, conserved site CH48_2392 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CH48_2392 IPR005694 Efflux pump membrane protein CH48_2392 IPR030196 Multidrug resistance protein MdtN CH48_2393 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein CH48_2395 IPR015424 Pyridoxal phosphate-dependent transferase CH48_2395 IPR027464 Ornithine decarboxylase, N-terminal CH48_2395 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal CH48_2395 IPR011193 Ornithine/lysine/arginine decarboxylase CH48_2395 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal CH48_2395 IPR027568 Ornithine decarboxylase SpeF CH48_2395 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily CH48_2395 IPR000310 Orn/Lys/Arg decarboxylase, major domain CH48_2395 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CH48_2395 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CH48_2395 IPR011006 CheY-like superfamily CH48_2396 IPR027566 Putrescine transporter PotE CH48_2396 IPR004754 Amino acid antiporter CH48_2396 IPR002293 Amino acid/polyamine transporter I CH48_240 IPR017853 Glycoside hydrolase superfamily CH48_240 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site CH48_240 IPR018120 Glycoside hydrolase family 1, active site CH48_240 IPR001360 Glycoside hydrolase family 1 CH48_2400 IPR005063 Transposase, IS1 CH48_2401 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain CH48_2401 IPR003220 InsA N-terminal domain CH48_2406 IPR011010 DNA breaking-rejoining enzyme, catalytic core CH48_2406 IPR013762 Integrase-like, catalytic domain superfamily CH48_2406 IPR002104 Integrase, catalytic domain CH48_2406 IPR010998 Integrase/recombinase, N-terminal CH48_2408 IPR011006 CheY-like superfamily CH48_2408 IPR015424 Pyridoxal phosphate-dependent transferase CH48_2408 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal CH48_2408 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CH48_2408 IPR027464 Ornithine decarboxylase, N-terminal CH48_2408 IPR000310 Orn/Lys/Arg decarboxylase, major domain CH48_2408 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal CH48_2408 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily CH48_2408 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CH48_2408 IPR011193 Ornithine/lysine/arginine decarboxylase CH48_241 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component CH48_241 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site CH48_241 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 CH48_241 IPR003352 Phosphotransferase system, EIIC CH48_241 IPR036878 Glucose permease domain IIB CH48_241 IPR011055 Duplicated hybrid motif CH48_241 IPR013013 Phosphotransferase system, EIIC component, type 1 CH48_241 IPR001996 Phosphotransferase system, IIB component, type 1 CH48_241 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component CH48_2410 IPR023346 Lysozyme-like domain superfamily CH48_2410 IPR023664 Murein transglycosylase-C CH48_2410 IPR008258 Transglycosylase SLT domain 1 CH48_2410 IPR000189 Prokaryotic transglycosylase, active site CH48_2410 IPR024570 Murein transglycosylase-C, N-terminal CH48_2411 IPR036766 Fe(II) trafficking protein YggX superfamily CH48_2411 IPR007457 Fe(II) trafficking protein YggX CH48_2412 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal CH48_2412 IPR000445 Helix-hairpin-helix motif CH48_2412 IPR003265 HhH-GPD domain CH48_2412 IPR004035 Endonuclease III, iron-sulphur binding site CH48_2412 IPR015797 NUDIX hydrolase-like domain superfamily CH48_2412 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif CH48_2412 IPR029119 MutY, C-terminal CH48_2412 IPR005760 A/G-specific adenine glycosylase MutY CH48_2412 IPR004036 Endonuclease III-like, conserved site-2 CH48_2412 IPR011257 DNA glycosylase CH48_2413 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH48_2413 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type CH48_2414 IPR007416 Protein of unknown function DUF469 CH48_2415 IPR012338 Beta-lactamase/transpeptidase-like CH48_2415 IPR015868 Glutaminase CH48_2416 IPR021307 Protein of unknown function DUF2884 CH48_2417 IPR007197 Radical SAM CH48_2417 IPR004559 Heme chaperone HemW-like CH48_2417 IPR034505 Anaerobic coproporphyrinogen-III oxidase CH48_2417 IPR023404 Radical SAM, alpha/beta horseshoe CH48_2417 IPR006638 Elp3/MiaB/NifB CH48_2417 IPR010723 HemN, C-terminal CH48_2418 IPR002637 Ham1-like protein CH48_2418 IPR029001 Inosine triphosphate pyrophosphatase-like CH48_2418 IPR020922 dITP/XTP pyrophosphatase CH48_2419 IPR005228 Conserved hypothetical protein CHP00251 CH48_2419 IPR003746 Protein of unknown function DUF167 CH48_2419 IPR036591 YggU-like superfamily CH48_242 IPR009057 Homeobox-like domain superfamily CH48_242 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_242 IPR000281 Helix-turn-helix protein RpiR CH48_242 IPR035472 RpiR-like, SIS domain CH48_242 IPR001347 Sugar isomerase (SIS) CH48_2420 IPR003425 CCB3/YggT CH48_2421 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CH48_2421 IPR000304 Pyrroline-5-carboxylate reductase CH48_2421 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal CH48_2421 IPR036291 NAD(P)-binding domain superfamily CH48_2421 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain CH48_2422 IPR011078 Pyridoxal phosphate homeostasis protein CH48_2422 IPR001608 Alanine racemase, N-terminal CH48_2422 IPR029066 PLP-binding barrel CH48_2423 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_2423 IPR006321 Pilus retraction protein PilT CH48_2423 IPR001482 Type II/IV secretion system protein CH48_2423 IPR003593 AAA+ ATPase domain CH48_2424 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type CH48_2424 IPR017754 Agmatine deiminase CH48_2425 IPR036526 Carbon-nitrogen hydrolase superfamily CH48_2425 IPR003010 Carbon-nitrogen hydrolase CH48_2425 IPR023719 Aliphatic amidase CH48_2426 IPR012337 Ribonuclease H-like superfamily CH48_2426 IPR005227 Putative pre-16S rRNA nuclease CH48_2426 IPR006641 YqgF/RNase H-like domain CH48_2426 IPR037027 YqgF/RNase H-like domain superfamily CH48_2427 IPR003774 Protein of unknown function UPF0301 CH48_2428 IPR011761 ATP-grasp fold CH48_2428 IPR013815 ATP-grasp fold, subdomain 1 CH48_2428 IPR016185 Pre-ATP-grasp domain superfamily CH48_2428 IPR004218 Prokaryotic glutathione synthetase, ATP-binding CH48_2428 IPR004215 Prokaryotic glutathione synthetase, N-terminal CH48_2428 IPR006284 Glutathione synthetase, prokaryotic CH48_2429 IPR006700 Ribosomal RNA small subunit methyltransferase E CH48_2429 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CH48_2429 IPR029028 Alpha/beta knot methyltransferases CH48_2429 IPR015947 PUA-like superfamily CH48_2430 IPR007346 Endonuclease I CH48_2431 IPR006640 SprT-like CH48_2431 IPR035240 SprT-like, zinc ribbon domain CH48_2431 IPR023483 Uncharacterised protein family SprT CH48_2432 IPR001845 HTH ArsR-type DNA-binding domain CH48_2432 IPR011991 ArsR-like helix-turn-helix domain CH48_2432 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_2432 IPR036390 Winged helix DNA-binding domain superfamily CH48_2433 IPR007272 Sulphur transport domain CH48_2435 IPR022630 S-adenosylmethionine synthetase, C-terminal CH48_2435 IPR022636 S-adenosylmethionine synthetase superfamily CH48_2435 IPR022629 S-adenosylmethionine synthetase, central domain CH48_2435 IPR022628 S-adenosylmethionine synthetase, N-terminal CH48_2435 IPR022631 S-adenosylmethionine synthetase, conserved site CH48_2435 IPR002133 S-adenosylmethionine synthetase CH48_2438 IPR002985 Arginine decarboxylase CH48_2438 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site CH48_2438 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal CH48_2438 IPR029066 PLP-binding barrel CH48_2438 IPR000183 Ornithine/DAP/Arg decarboxylase CH48_2438 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal CH48_2438 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site CH48_2438 IPR041128 Arginine decarboxylase, C-terminal helical CH48_2438 IPR040634 Arginine decarboxylase, helical bundle domain CH48_2439 IPR017941 Rieske [2Fe-2S] iron-sulphur domain CH48_2439 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily CH48_2440 IPR001915 Peptidase M48 CH48_2441 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II CH48_2441 IPR005474 Transketolase, N-terminal CH48_2441 IPR029061 Thiamin diphosphate-binding fold CH48_2441 IPR005475 Transketolase-like, pyrimidine-binding domain CH48_2441 IPR005478 Transketolase, bacterial-like CH48_2441 IPR033247 Transketolase family CH48_2441 IPR033248 Transketolase, C-terminal domain CH48_2441 IPR020826 Transketolase binding site CH48_2442 IPR006422 D-erythrose-4-phosphate dehydrogenase CH48_2442 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family CH48_2442 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site CH48_2442 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain CH48_2442 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain CH48_2442 IPR036291 NAD(P)-binding domain superfamily CH48_2443 IPR001576 Phosphoglycerate kinase CH48_2443 IPR015824 Phosphoglycerate kinase, N-terminal CH48_2443 IPR015911 Phosphoglycerate kinase, conserved site CH48_2443 IPR036043 Phosphoglycerate kinase superfamily CH48_2444 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype CH48_2444 IPR000771 Fructose-bisphosphate aldolase, class-II CH48_2444 IPR013785 Aldolase-type TIM barrel CH48_2445 IPR000387 Tyrosine specific protein phosphatases domain CH48_2445 IPR003595 Protein-tyrosine phosphatase, catalytic CH48_2445 IPR015103 Protein-tyrosine phosphatase, YopH, N-terminal CH48_2445 IPR029021 Protein-tyrosine phosphatase-like CH48_2445 IPR000242 PTP type protein phosphatase CH48_2445 IPR003546 Type III secreted modular tyrosine phosphatase, SptP/YopH CH48_2445 IPR036484 Protein-tyrosine phosphatase, YopH, N-terminal domain superfamily CH48_2445 IPR016130 Protein-tyrosine phosphatase, active site CH48_2446 IPR006685 Mechanosensitive ion channel MscS CH48_2446 IPR008910 Conserved TM helix CH48_2446 IPR011066 Mechanosensitive ion channel MscS, C-terminal CH48_2446 IPR023408 Mechanosensitive ion channel MscS domain superfamily CH48_2446 IPR006686 Mechanosensitive ion channel MscS, conserved site CH48_2446 IPR010920 LSM domain superfamily CH48_2446 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 CH48_2447 IPR005338 Anhydro-N-acetylmuramic acid kinase CH48_2449 IPR023445 Arginine exporter protein ArgO, enterobacteria CH48_2449 IPR004777 L-lysine exporter/arginine exporter CH48_2449 IPR001123 Amino acid exporter protein, LeuE-type CH48_2450 IPR007497 Protein of unknown function DUF541 CH48_2451 IPR005119 LysR, substrate-binding CH48_2451 IPR000847 Transcription regulator HTH, LysR CH48_2451 IPR017685 HTH-type transcriptional regulator ArgP CH48_2451 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria CH48_2451 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_2451 IPR036390 Winged helix DNA-binding domain superfamily CH48_2452 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup CH48_2452 IPR037171 NagB/RpiA transferase-like CH48_2452 IPR004788 Ribose 5-phosphate isomerase, type A CH48_2453 IPR036291 NAD(P)-binding domain superfamily CH48_2453 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CH48_2453 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CH48_2453 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CH48_2453 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CH48_2453 IPR002912 ACT domain CH48_2459 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily CH48_2459 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone CH48_2459 IPR001424 Superoxide dismutase, copper/zinc binding domain CH48_2459 IPR018152 Superoxide dismutase, copper/zinc, binding site CH48_2460 IPR013785 Aldolase-type TIM barrel CH48_2460 IPR007197 Radical SAM CH48_2460 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria CH48_2460 IPR024924 7-carboxy-7-deazaguanine synthase-like CH48_2463 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily CH48_2463 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family CH48_2464 IPR017927 FAD-binding domain, ferredoxin reductase-type CH48_2464 IPR001094 Flavodoxin-like CH48_2464 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding CH48_2464 IPR017938 Riboflavin synthase-like beta-barrel CH48_2464 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria CH48_2464 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain CH48_2464 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CH48_2464 IPR029039 Flavoprotein-like superfamily CH48_2464 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase CH48_2464 IPR008254 Flavodoxin/nitric oxide synthase CH48_2464 IPR001433 Oxidoreductase FAD/NAD(P)-binding CH48_2464 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily CH48_2465 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit CH48_2465 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain CH48_2465 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily CH48_2465 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain CH48_2465 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site CH48_2466 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH48_2466 IPR011800 Phosphoadenosine phosphosulphate reductase CysH CH48_2466 IPR002500 Phosphoadenosine phosphosulphate reductase CH48_2466 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase CH48_2469 IPR007484 Peptidase M28 CH48_247 IPR010534 Bacteriophage 933W, GpQ CH48_2470 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site CH48_2470 IPR019478 Sirohaem synthase, dimerisation domain CH48_2470 IPR006367 Sirohaem synthase, N-terminal CH48_2470 IPR028281 Siroheme synthase, central domain CH48_2470 IPR012409 Sirohaem synthase CH48_2470 IPR037115 Sirohaem synthase, dimerisation domain superfamily CH48_2470 IPR036291 NAD(P)-binding domain superfamily CH48_2470 IPR006366 Uroporphyrin-III C-methyltransferase CH48_2470 IPR014776 Tetrapyrrole methylase, subdomain 2 CH48_2470 IPR014777 Tetrapyrrole methylase, subdomain 1 CH48_2470 IPR000878 Tetrapyrrole methylase CH48_2470 IPR035996 Tetrapyrrole methylase superfamily CH48_2471 IPR002500 Phosphoadenosine phosphosulphate reductase CH48_2471 IPR011784 Sulphate adenylyltransferase, small subunit CH48_2471 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH48_2472 IPR005225 Small GTP-binding protein domain CH48_2472 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_2472 IPR031157 Tr-type G domain, conserved site CH48_2472 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain CH48_2472 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CH48_2472 IPR011779 Sulphate adenylyltransferase, large subunit CH48_2472 IPR009000 Translation protein, beta-barrel domain superfamily CH48_2472 IPR000795 Transcription factor, GTP-binding domain CH48_2473 IPR002891 Adenylyl-sulfate kinase CH48_2473 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_2474 IPR022721 Protein of unknown function DUF3561 CH48_2475 IPR023081 Cell division protein FtsB CH48_2475 IPR007060 Septum formation initiator FtsL/DivIC CH48_2476 IPR029044 Nucleotide-diphospho-sugar transferases CH48_2476 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CH48_2476 IPR034683 Cytidylyltransferase IspD/TarI CH48_2476 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site CH48_2477 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily CH48_2477 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site CH48_2477 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase CH48_2478 IPR001656 Pseudouridine synthase, TruD CH48_2478 IPR011760 Pseudouridine synthase, TruD, insertion domain CH48_2478 IPR020103 Pseudouridine synthase, catalytic domain superfamily CH48_2478 IPR042214 Pseudouridine synthase, TruD, catalytic domain CH48_2478 IPR020119 Pseudouridine synthase TruD, conserved site CH48_2479 IPR030048 Survival protein SurE CH48_2479 IPR002828 Survival protein SurE-like phosphatase/nucleotidase CH48_2479 IPR036523 SurE-like phosphatase/nucleotidase superfamily CH48_2480 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH48_2480 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase CH48_2481 IPR011055 Duplicated hybrid motif CH48_2481 IPR016047 Peptidase M23 CH48_2481 IPR036779 LysM domain superfamily CH48_2481 IPR018392 LysM domain CH48_2482 IPR000943 RNA polymerase sigma-70 CH48_2482 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_2482 IPR007630 RNA polymerase sigma-70 region 4 CH48_2482 IPR013325 RNA polymerase sigma factor, region 2 CH48_2482 IPR013324 RNA polymerase sigma factor, region 3/4-like CH48_2482 IPR012761 RNA polymerase sigma factor RpoS CH48_2482 IPR014284 RNA polymerase sigma-70 like domain CH48_2482 IPR007624 RNA polymerase sigma-70 region 3 CH48_2482 IPR007627 RNA polymerase sigma-70 region 2 CH48_2482 IPR009042 RNA polymerase sigma-70 region 1.2 CH48_2483 IPR005748 DNA mismatch repair protein MutS CH48_2483 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_2483 IPR036187 DNA mismatch repair protein MutS, core domain superfamily CH48_2483 IPR007860 DNA mismatch repair protein MutS, connector domain CH48_2483 IPR036678 MutS, connector domain superfamily CH48_2483 IPR007861 DNA mismatch repair protein MutS, clamp CH48_2483 IPR007695 DNA mismatch repair protein MutS-like, N-terminal CH48_2483 IPR017261 DNA mismatch repair protein MutS/MSH CH48_2483 IPR016151 DNA mismatch repair protein MutS, N-terminal CH48_2483 IPR007696 DNA mismatch repair protein MutS, core CH48_2483 IPR000432 DNA mismatch repair protein MutS, C-terminal CH48_2487 IPR008966 Adhesion domain superfamily CH48_2487 IPR036937 Fimbrial-type adhesion domain superfamily CH48_2487 IPR000259 Fimbrial-type adhesion domain CH48_2488 IPR036937 Fimbrial-type adhesion domain superfamily CH48_2488 IPR008966 Adhesion domain superfamily CH48_2488 IPR000259 Fimbrial-type adhesion domain CH48_2491 IPR016148 Pili assembly chaperone, C-terminal CH48_2491 IPR001829 Pili assembly chaperone, bacterial CH48_2491 IPR018046 Pili assembly chaperone, conserved site CH48_2491 IPR036316 Pili assembly chaperone, C-terminal domain superfamily CH48_2491 IPR008962 PapD-like superfamily CH48_2491 IPR013783 Immunoglobulin-like fold CH48_2491 IPR016147 Pili assembly chaperone, N-terminal CH48_2493 IPR000259 Fimbrial-type adhesion domain CH48_2493 IPR036937 Fimbrial-type adhesion domain superfamily CH48_2493 IPR008966 Adhesion domain superfamily CH48_2494 IPR008966 Adhesion domain superfamily CH48_2494 IPR000259 Fimbrial-type adhesion domain CH48_2494 IPR036937 Fimbrial-type adhesion domain superfamily CH48_25 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CH48_25 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CH48_25 IPR006311 Twin-arginine translocation pathway, signal sequence CH48_250 IPR036687 DinI-like superfamily CH48_250 IPR010391 DNA damage-inducible protein DinI-like CH48_2500 IPR017871 ABC transporter, conserved site CH48_2500 IPR011527 ABC transporter type 1, transmembrane domain CH48_2500 IPR036640 ABC transporter type 1, transmembrane domain superfamily CH48_2500 IPR003439 ABC transporter-like CH48_2500 IPR039421 Type I protein exporter CH48_2500 IPR003593 AAA+ ATPase domain CH48_2500 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_2500 IPR005074 Peptidase C39, bacteriocin processing CH48_2500 IPR033838 Colicin V processing peptidase CH48_2501 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CH48_2501 IPR030190 Macrolide export protein MacA CH48_2501 IPR006143 RND efflux pump, membrane fusion protein CH48_2502 IPR017871 ABC transporter, conserved site CH48_2502 IPR003838 ABC transporter permease protein domain CH48_2502 IPR003593 AAA+ ATPase domain CH48_2502 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_2502 IPR025857 MacB-like periplasmic core domain CH48_2502 IPR003439 ABC transporter-like CH48_2502 IPR017911 ABC transporter, macrolide export, ATP-binding domain CH48_2503 IPR003423 Outer membrane efflux protein CH48_2503 IPR010131 RND efflux system, outer membrane lipoprotein, NodT CH48_2504 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 CH48_2504 IPR016039 Thiolase-like CH48_2504 IPR018201 Beta-ketoacyl synthase, active site CH48_2504 IPR014031 Beta-ketoacyl synthase, C-terminal CH48_2504 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CH48_2504 IPR014030 Beta-ketoacyl synthase, N-terminal CH48_2504 IPR000794 Beta-ketoacyl synthase CH48_2507 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase CH48_2507 IPR036291 NAD(P)-binding domain superfamily CH48_2507 IPR020904 Short-chain dehydrogenase/reductase, conserved site CH48_2507 IPR002347 Short-chain dehydrogenase/reductase SDR CH48_2509 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CH48_2509 IPR015424 Pyridoxal phosphate-dependent transferase CH48_2509 IPR004839 Aminotransferase, class I/classII CH48_2509 IPR005861 Histidinol-phosphate aminotransferase family CH48_2509 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CH48_251 IPR020080 Outer membrane adhesin/peptidase omptin CH48_251 IPR020079 Peptidase A26, omptin, conserved site CH48_251 IPR000036 Peptidase A26, omptin CH48_2510 IPR009056 Cytochrome c-like domain CH48_2510 IPR025992 Haem-binding domain CH48_2510 IPR004852 Di-haem cytochrome c peroxidase CH48_2510 IPR036909 Cytochrome c-like domain superfamily CH48_2512 IPR020568 Ribosomal protein S5 domain 2-type fold CH48_2512 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_2512 IPR009022 Elongation factor G, domain III CH48_2512 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CH48_2512 IPR005225 Small GTP-binding protein domain CH48_2512 IPR031157 Tr-type G domain, conserved site CH48_2512 IPR041095 Elongation Factor G, domain II CH48_2512 IPR000640 Elongation factor EFG, domain V-like CH48_2512 IPR009000 Translation protein, beta-barrel domain superfamily CH48_2512 IPR004540 Translation elongation factor EFG/EF2 CH48_2512 IPR005517 Translation elongation factor EFG/EF2, domain IV CH48_2512 IPR004161 Translation elongation factor EFTu-like, domain 2 CH48_2512 IPR035649 EFG, domain V CH48_2512 IPR035647 EF-G domain III/V-like CH48_2512 IPR000795 Transcription factor, GTP-binding domain CH48_2513 IPR011991 ArsR-like helix-turn-helix domain CH48_2513 IPR001845 HTH ArsR-type DNA-binding domain CH48_2513 IPR036390 Winged helix DNA-binding domain superfamily CH48_2513 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_2514 IPR036291 NAD(P)-binding domain superfamily CH48_2514 IPR011032 GroES-like superfamily CH48_2514 IPR013154 Alcohol dehydrogenase, N-terminal CH48_2514 IPR013149 Alcohol dehydrogenase, C-terminal CH48_2515 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component CH48_2516 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit CH48_2517 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily CH48_2517 IPR004720 Phosphotransferase system, sorbose subfamily IIB component CH48_2517 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup CH48_2518 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily CH48_2518 IPR033887 PTS system mannose/sorbose specific IIA subunit CH48_2518 IPR004701 Phosphotransferase system, mannose-type IIA component CH48_2518 IPR013789 Phosphotransferase system, mannose family IIA component CH48_2519 IPR007324 Sugar-binding domain, putative CH48_2519 IPR011991 ArsR-like helix-turn-helix domain CH48_2519 IPR037171 NagB/RpiA transferase-like CH48_2519 IPR025246 Transposase IS30-like HTH domain CH48_2519 IPR009057 Homeobox-like domain superfamily CH48_252 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CH48_252 IPR029151 Periplasmic sensor-like domain superfamily CH48_252 IPR033479 Double Cache domain 1 CH48_252 IPR004090 Chemotaxis methyl-accepting receptor CH48_252 IPR000727 Target SNARE coiled-coil homology domain CH48_252 IPR003660 HAMP domain CH48_2520 IPR036526 Carbon-nitrogen hydrolase superfamily CH48_2520 IPR003010 Carbon-nitrogen hydrolase CH48_2524 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein CH48_2524 IPR003593 AAA+ ATPase domain CH48_2524 IPR003439 ABC transporter-like CH48_2524 IPR017871 ABC transporter, conserved site CH48_2524 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_2525 IPR030921 LPS export ABC transporter, ATP-binding protein LptB CH48_2525 IPR003593 AAA+ ATPase domain CH48_2525 IPR003439 ABC transporter-like CH48_2525 IPR017871 ABC transporter, conserved site CH48_2525 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_2526 IPR001851 ABC transporter, permease CH48_2526 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal CH48_2527 IPR001851 ABC transporter, permease CH48_2528 IPR000709 Leu/Ile/Val-binding protein CH48_2528 IPR028081 Leucine-binding protein domain CH48_2528 IPR028082 Periplasmic binding protein-like I CH48_2529 IPR011167 Iron-dependent fumarate hydratase CH48_2529 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily CH48_2529 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain CH48_2529 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain CH48_2529 IPR020557 Fumarate lyase, conserved site CH48_253 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D CH48_253 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CH48_253 IPR001279 Metallo-beta-lactamase CH48_2530 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CH48_2530 IPR006311 Twin-arginine translocation pathway, signal sequence CH48_2530 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE CH48_2530 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site CH48_2530 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CH48_2530 IPR006656 Molybdopterin oxidoreductase CH48_2530 IPR006657 Molybdopterin dinucleotide-binding domain CH48_2530 IPR009010 Aspartate decarboxylase-like domain superfamily CH48_2530 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site CH48_2531 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CH48_2531 IPR014297 Dimethylsulphoxide reductase, chain B CH48_2531 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CH48_2532 IPR007059 DMSO reductase anchor subunit (DmsC) CH48_2533 IPR028611 Tat proofreading chaperone DmsD CH48_2533 IPR020945 DMSO/Nitrate reductase chaperone CH48_2533 IPR036411 TorD-like superfamily CH48_2533 IPR026269 Tat proofreading chaperone DmsD-type CH48_2536 IPR011701 Major facilitator superfamily CH48_2536 IPR023745 MSF-type transporter, YcaD CH48_2536 IPR036259 MFS transporter superfamily CH48_2536 IPR020846 Major facilitator superfamily domain CH48_2537 IPR036653 CinA-like, C-terminal CH48_2537 IPR008136 CinA, C-terminal CH48_2538 IPR003593 AAA+ ATPase domain CH48_2538 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain CH48_2538 IPR023400 DNA recombination and repair protein RecA, C-terminal CH48_2538 IPR020584 DNA recombination/repair protein RecA, conserved site CH48_2538 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface CH48_2538 IPR013765 DNA recombination and repair protein RecA CH48_2538 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_2539 IPR003783 Regulatory protein RecX CH48_2539 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_254 IPR039672 Lactose permease-like CH48_254 IPR036259 MFS transporter superfamily CH48_254 IPR001927 Sodium:galactoside symporter CH48_254 IPR018043 Sodium:galactoside symporter, conserved site CH48_2540 IPR012947 Threonyl/alanyl tRNA synthetase, SAD CH48_2540 IPR002318 Alanine-tRNA ligase, class IIc CH48_2540 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily CH48_2540 IPR009000 Translation protein, beta-barrel domain superfamily CH48_2540 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily CH48_2540 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal CH48_2540 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria CH48_2540 IPR003156 DHHA1 domain CH48_2540 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain CH48_2541 IPR003751 Translational regulator CsrA CH48_2541 IPR036107 Carbon storage regulator superfamily CH48_2546 IPR036412 HAD-like superfamily CH48_2546 IPR010976 Beta-phosphoglucomutase hydrolase CH48_2546 IPR041492 Haloacid dehalogenase-like hydrolase CH48_2546 IPR023214 HAD superfamily CH48_2546 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CH48_2546 IPR006439 HAD hydrolase, subfamily IA CH48_2547 IPR032816 SNARE associated Golgi protein CH48_2548 IPR006334 Glutamate--cysteine ligase, monofunctional CH48_2548 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain CH48_2548 IPR007370 Glutamate--cysteine ligase CH48_2549 IPR003815 S-ribosylhomocysteinase (LuxS) CH48_2549 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like CH48_2549 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily CH48_255 IPR012338 Beta-lactamase/transpeptidase-like CH48_255 IPR001466 Beta-lactamase-related CH48_2551 IPR000644 CBS domain CH48_2551 IPR005170 Transporter-associated domain CH48_2551 IPR016169 FAD-binding, type PCMH, subdomain 2 CH48_2551 IPR036318 FAD-binding, type PCMH-like superfamily CH48_2551 IPR002550 CNNM, transmembrane domain CH48_2552 IPR002541 Cytochrome c assembly protein CH48_2553 IPR022941 Signal recognition particle, SRP54 subunit CH48_2553 IPR004780 Signal recognition particle protein CH48_2553 IPR013822 Signal recognition particle SRP54, helical bundle CH48_2553 IPR004125 Signal recognition particle, SRP54 subunit, M-domain CH48_2553 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_2553 IPR003593 AAA+ ATPase domain CH48_2553 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain CH48_2553 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily CH48_2553 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily CH48_2554 IPR000307 Ribosomal protein S16 CH48_2554 IPR020592 Ribosomal protein S16, conserved site CH48_2554 IPR023803 Ribosomal protein S16 domain superfamily CH48_2555 IPR011961 16S rRNA processing protein RimM CH48_2555 IPR027275 PRC-barrel domain CH48_2555 IPR002676 RimM, N-terminal CH48_2555 IPR009000 Translation protein, beta-barrel domain superfamily CH48_2555 IPR036976 RimM, N-terminal domain superfamily CH48_2555 IPR011033 PRC-barrel-like superfamily CH48_2556 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal CH48_2556 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CH48_2556 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain CH48_2556 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria CH48_2556 IPR029028 Alpha/beta knot methyltransferases CH48_2557 IPR008991 Translation protein SH3-like domain superfamily CH48_2557 IPR038657 Ribosomal protein L19 superfamily CH48_2557 IPR018257 Ribosomal protein L19, conserved site CH48_2557 IPR001857 Ribosomal protein L19 CH48_2558 IPR007433 Protein of unknown function DUF481 CH48_2559 IPR004668 Anaerobic c4-dicarboxylate membrane transporter CH48_2560 IPR011006 CheY-like superfamily CH48_2560 IPR001789 Signal transduction response regulator, receiver domain CH48_2560 IPR007492 LytTR DNA-binding domain CH48_2561 IPR006219 DHAP synthase, class 1 CH48_2561 IPR013785 Aldolase-type TIM barrel CH48_2561 IPR006218 DAHP synthetase I/KDSA CH48_2562 IPR036291 NAD(P)-binding domain superfamily CH48_2562 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CH48_2562 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein CH48_2562 IPR036263 Chorismate mutase type II superfamily CH48_2562 IPR036979 Chorismate mutase domain superfamily CH48_2562 IPR003099 Prephenate dehydrogenase CH48_2562 IPR002701 Chorismate mutase II, prokaryotic-type CH48_2562 IPR011277 Chorismate mutase, T-protein CH48_2563 IPR036979 Chorismate mutase domain superfamily CH48_2563 IPR010952 Chorismate mutase, gammaproteobacteria CH48_2563 IPR036263 Chorismate mutase type II superfamily CH48_2563 IPR002912 ACT domain CH48_2563 IPR001086 Prephenate dehydratase CH48_2563 IPR018528 Prephenate dehydratase, conserved site CH48_2563 IPR002701 Chorismate mutase II, prokaryotic-type CH48_2563 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase CH48_2564 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal CH48_2564 IPR003346 Transposase, IS116/IS110/IS902 CH48_2565 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal CH48_2565 IPR003346 Transposase, IS116/IS110/IS902 CH48_2566 IPR004176 Clp, N-terminal CH48_2566 IPR001270 ClpA/B family CH48_2566 IPR018368 ClpA/B, conserved site 1 CH48_2566 IPR003593 AAA+ ATPase domain CH48_2566 IPR041546 ClpA/ClpB, AAA lid domain CH48_2566 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_2566 IPR028299 ClpA/B, conserved site 2 CH48_2566 IPR019489 Clp ATPase, C-terminal CH48_2566 IPR017730 Chaperonin ClpB CH48_2566 IPR003959 ATPase, AAA-type, core CH48_2566 IPR036628 Clp, N-terminal domain superfamily CH48_2568 IPR002942 RNA-binding S4 domain CH48_2568 IPR020103 Pseudouridine synthase, catalytic domain superfamily CH48_2568 IPR006225 Pseudouridine synthase, RluC/RluD CH48_2568 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site CH48_2568 IPR006145 Pseudouridine synthase, RsuA/RluA CH48_2568 IPR036986 RNA-binding S4 domain superfamily CH48_2569 IPR017689 Outer membrane protein assembly factor BamD CH48_2569 IPR039565 Outer membrane lipoprotein BamD-like CH48_2569 IPR011990 Tetratricopeptide-like helical domain superfamily CH48_2570 IPR003489 Ribosome hibernation promoting factor/RaiA CH48_2570 IPR036567 Ribosome hibernation promotion factor-like CH48_2577 IPR017028 Uncharacterised conserved protein UCP034456 CH48_2577 IPR018736 Protein of unknown function DUF2279, periplasmic lipoprotein CH48_2578 IPR025202 Phospholipase D-like domain CH48_2578 IPR016270 CDP-alcohol phosphatidyltransferase class-II family CH48_2578 IPR001736 Phospholipase D/Transphosphatidylase CH48_2579 IPR016181 Acyl-CoA N-acyltransferase CH48_2579 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain CH48_2579 IPR013815 ATP-grasp fold, subdomain 1 CH48_2579 IPR003781 CoA-binding CH48_2579 IPR000182 GNAT domain CH48_2579 IPR036291 NAD(P)-binding domain superfamily CH48_2579 IPR016102 Succinyl-CoA synthetase-like CH48_2579 IPR011761 ATP-grasp fold CH48_258 IPR023614 Porin domain superfamily CH48_258 IPR001702 Porin, Gram-negative type CH48_258 IPR013793 Porin, Gram-negative type, conserved site CH48_258 IPR001897 Porin, gammaproteobacterial CH48_2581 IPR013766 Thioredoxin domain CH48_2581 IPR017937 Thioredoxin, conserved site CH48_2581 IPR036249 Thioredoxin-like superfamily CH48_2581 IPR005746 Thioredoxin CH48_2582 IPR001537 tRNA/rRNA methyltransferase, SpoU type CH48_2582 IPR004441 RNA methyltransferase TrmH family CH48_2582 IPR029064 50S ribosomal protein L30e-like CH48_2582 IPR029028 Alpha/beta knot methyltransferases CH48_2582 IPR016479 tRNA/rRNA methyltransferase, YfiF, predicted CH48_2582 IPR013123 RNA 2-O ribose methyltransferase, substrate binding CH48_2582 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CH48_2584 IPR020846 Major facilitator superfamily domain CH48_2584 IPR011701 Major facilitator superfamily CH48_2584 IPR036259 MFS transporter superfamily CH48_2584 IPR004638 Drug resistance transporter EmrB-like CH48_2585 IPR005694 Efflux pump membrane protein CH48_2585 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CH48_2586 IPR003423 Outer membrane efflux protein CH48_2586 IPR010131 RND efflux system, outer membrane lipoprotein, NodT CH48_2587 IPR023187 Transcriptional regulator MarR-type, conserved site CH48_2587 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_2587 IPR036390 Winged helix DNA-binding domain superfamily CH48_2587 IPR000835 MarR-type HTH domain CH48_2588 IPR008407 Branched-chain amino acid transport, AzlD CH48_2589 IPR011606 Branched-chain amino acid transport, permease CH48_259 IPR010129 Type I secretion membrane fusion protein, HlyD family CH48_259 IPR006144 Secretion protein HlyD, conserved site CH48_2590 IPR020846 Major facilitator superfamily domain CH48_2590 IPR036259 MFS transporter superfamily CH48_2590 IPR011701 Major facilitator superfamily CH48_2594 IPR014087 1-carboxybiuret hydrolase, AtzE subunit CH48_2594 IPR000120 Amidase CH48_2594 IPR023631 Amidase signature domain CH48_2594 IPR036928 Amidase signature (AS) superfamily CH48_2597 IPR018313 Solute-binding protein family 3, conserved site CH48_2597 IPR001320 Ionotropic glutamate receptor CH48_2597 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter CH48_2597 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CH48_2598 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CH48_2598 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CH48_2598 IPR035906 MetI-like superfamily CH48_2599 IPR035906 MetI-like superfamily CH48_2599 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CH48_2599 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CH48_26 IPR005467 Histidine kinase domain CH48_26 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH48_26 IPR003594 Histidine kinase/HSP90-like ATPase CH48_26 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CH48_26 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CH48_26 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CH48_2600 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type CH48_2600 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_2600 IPR017871 ABC transporter, conserved site CH48_2600 IPR003439 ABC transporter-like CH48_2600 IPR003593 AAA+ ATPase domain CH48_2601 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CH48_2601 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase CH48_2601 IPR015424 Pyridoxal phosphate-dependent transferase CH48_2601 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CH48_2601 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CH48_2601 IPR000192 Aminotransferase class V domain CH48_2602 IPR036264 Bacterial exopeptidase dimerisation domain CH48_2602 IPR011650 Peptidase M20, dimerisation domain CH48_2602 IPR010158 Amidase, carbamoylase-type CH48_2602 IPR002933 Peptidase M20 CH48_2603 IPR036526 Carbon-nitrogen hydrolase superfamily CH48_2603 IPR001110 Uncharacterised protein family UPF0012, conserved site CH48_2603 IPR003010 Carbon-nitrogen hydrolase CH48_2604 IPR015424 Pyridoxal phosphate-dependent transferase CH48_2604 IPR004839 Aminotransferase, class I/classII CH48_2604 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CH48_2604 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CH48_2605 IPR036409 Class II aldolase/adducin N-terminal domain superfamily CH48_2605 IPR001303 Class II aldolase/adducin N-terminal CH48_2605 IPR017714 Methylthioribulose-1-phosphate dehydratase CH48_2606 IPR023214 HAD superfamily CH48_2606 IPR006439 HAD hydrolase, subfamily IA CH48_2606 IPR036412 HAD-like superfamily CH48_2606 IPR023943 Enolase-phosphatase E1 CH48_2607 IPR014710 RmlC-like jelly roll fold CH48_2607 IPR023956 Acireductone dioxygenase ARD, bacteria CH48_2607 IPR011051 RmlC-like cupin domain superfamily CH48_2607 IPR004313 Acireductone dioxygenase ARD family CH48_2608 IPR011559 Initiation factor 2B alpha/beta/delta CH48_2608 IPR005251 Methylthioribose-1-phosphate isomerase CH48_2608 IPR000649 Initiation factor 2B-related CH48_2608 IPR037171 NagB/RpiA transferase-like CH48_2608 IPR027363 Methylthioribose-1-phosphate isomerase, N-terminal CH48_2609 IPR011009 Protein kinase-like domain superfamily CH48_2609 IPR009212 Methylthioribose kinase CH48_2609 IPR002575 Aminoglycoside phosphotransferase CH48_261 IPR011701 Major facilitator superfamily CH48_261 IPR020846 Major facilitator superfamily domain CH48_261 IPR036259 MFS transporter superfamily CH48_2610 IPR034746 POTRA domain CH48_2610 IPR005565 Haemolysin activator HlyB, C-terminal CH48_2610 IPR013686 Polypeptide-transport-associated, ShlB-type CH48_2611 IPR011050 Pectin lyase fold/virulence factor CH48_2611 IPR012334 Pectin lyase fold CH48_2611 IPR008638 Filamentous haemagglutinin, N-terminal CH48_2612 IPR040542 HMW1 domain 2 CH48_2612 IPR041109 HMW1C N-terminal CH48_2613 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CH48_2613 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CH48_2613 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CH48_2613 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CH48_2613 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CH48_2613 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type CH48_2614 IPR001347 Sugar isomerase (SIS) CH48_2614 IPR035461 GmhA/DiaA CH48_2614 IPR004515 Phosphoheptose isomerase CH48_2615 IPR005490 L,D-transpeptidase catalytic domain CH48_2615 IPR038063 L,D-transpeptidase catalytic domain-like CH48_2616 IPR017932 Glutamine amidotransferase type 2 domain CH48_2616 IPR026869 Putative glutamine amidotransferase type 2 CH48_2616 IPR029055 Nucleophile aminohydrolases, N-terminal CH48_2617 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain CH48_2617 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A CH48_2618 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B CH48_2618 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD CH48_2619 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C CH48_2619 IPR007329 FMN-binding CH48_262 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH48_262 IPR003594 Histidine kinase/HSP90-like ATPase CH48_262 IPR036641 HPT domain superfamily CH48_262 IPR030861 Phosphotransferase RcsD CH48_262 IPR032306 Phosphotransferase RcsD, RcsD-ABL domain CH48_262 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CH48_262 IPR005467 Histidine kinase domain CH48_262 IPR038616 Phosphotransferase RcsD, RcsD-ABL domain superfamily CH48_2620 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D CH48_2620 IPR003667 NqrDE/RnfAE CH48_2621 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E CH48_2621 IPR003667 NqrDE/RnfAE CH48_2622 IPR012675 Beta-grasp domain superfamily CH48_2622 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F CH48_2622 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase CH48_2622 IPR001433 Oxidoreductase FAD/NAD(P)-binding CH48_2622 IPR017927 FAD-binding domain, ferredoxin reductase-type CH48_2622 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain CH48_2622 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CH48_2622 IPR036010 2Fe-2S ferredoxin-like superfamily CH48_2622 IPR017938 Riboflavin synthase-like beta-barrel CH48_2622 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CH48_2623 IPR042159 Flavin-trafficking protein ApbE CH48_2623 IPR024932 Flavin transferase ApbE CH48_2623 IPR003374 ApbE-like superfamily CH48_2624 IPR007495 (Na+)-NQR maturation factor NqrM CH48_2625 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily CH48_2625 IPR030395 Glycerophosphodiester phosphodiesterase domain CH48_2626 IPR011095 D-alanine--D-alanine ligase, C-terminal CH48_2626 IPR011127 D-alanine--D-alanine ligase, N-terminal domain CH48_2626 IPR016185 Pre-ATP-grasp domain superfamily CH48_2626 IPR013815 ATP-grasp fold, subdomain 1 CH48_2626 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site CH48_2626 IPR005905 D-alanine--D-alanine ligase CH48_2626 IPR011761 ATP-grasp fold CH48_2627 IPR039445 Transcriptional regulator DauR-like, HTH domain CH48_2627 IPR039446 Transcriptional regulator DauR-like CH48_2627 IPR013559 YheO-like CH48_2628 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site CH48_2628 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CH48_2628 IPR001926 Pyridoxal-phosphate dependent enzyme CH48_263 IPR000792 Transcription regulator LuxR, C-terminal CH48_263 IPR016032 Signal transduction response regulator, C-terminal effector CH48_263 IPR030864 Transcriptional regulatory protein RcsB CH48_263 IPR011006 CheY-like superfamily CH48_263 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_263 IPR001789 Signal transduction response regulator, receiver domain CH48_2630 IPR017961 DNA polymerase, Y-family, little finger domain CH48_2630 IPR036775 DNA polymerase, Y-family, little finger domain superfamily CH48_2630 IPR001126 UmuC domain CH48_2630 IPR024728 DNA polymerase type-Y, HhH motif CH48_2630 IPR022880 DNA polymerase IV CH48_2631 IPR011650 Peptidase M20, dimerisation domain CH48_2631 IPR001160 Peptidase M20C, Xaa-His dipeptidase CH48_2631 IPR002933 Peptidase M20 CH48_2632 IPR029057 Phosphoribosyltransferase-like CH48_2632 IPR023747 Xanthine-guanine phosphoribosyltransferase CH48_2632 IPR000836 Phosphoribosyltransferase domain CH48_2634 IPR009986 Sigma factor-binding transcriptional regulator Crl CH48_2634 IPR038208 Sigma factor-binding protein Crl superfamily CH48_2635 IPR015947 PUA-like superfamily CH48_2635 IPR002478 PUA domain CH48_2635 IPR019797 Glutamate 5-kinase, conserved site CH48_2635 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase CH48_2635 IPR011529 Glutamate 5-kinase CH48_2635 IPR001057 Glutamate/acetylglutamate kinase CH48_2635 IPR041739 Glutamate-5-kinase domain CH48_2635 IPR001048 Aspartate/glutamate/uridylate kinase CH48_2635 IPR036974 PUA domain superfamily CH48_2635 IPR036393 Acetylglutamate kinase-like superfamily CH48_2636 IPR015590 Aldehyde dehydrogenase domain CH48_2636 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site CH48_2636 IPR012134 Glutamate-5-semialdehyde dehydrogenase CH48_2636 IPR000965 GPR domain CH48_2636 IPR016161 Aldehyde/histidinol dehydrogenase CH48_2636 IPR016163 Aldehyde dehydrogenase, C-terminal CH48_2636 IPR016162 Aldehyde dehydrogenase, N-terminal CH48_2637 IPR011663 UbiC transcription regulator-associated CH48_2637 IPR036390 Winged helix DNA-binding domain superfamily CH48_2637 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily CH48_2637 IPR000524 Transcription regulator HTH, GntR CH48_2637 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_2638 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site CH48_2638 IPR003352 Phosphotransferase system, EIIC CH48_2638 IPR013013 Phosphotransferase system, EIIC component, type 1 CH48_2638 IPR001996 Phosphotransferase system, IIB component, type 1 CH48_2638 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component CH48_2638 IPR010975 Phosphotransferase system, alpha-glucoside-specific IIBC component CH48_2638 IPR036878 Glucose permease domain IIB CH48_2639 IPR001088 Glycoside hydrolase, family 4 CH48_2639 IPR036291 NAD(P)-binding domain superfamily CH48_2639 IPR022616 Glycosyl hydrolase, family 4, C-terminal CH48_2639 IPR019802 Glycoside hydrolase, family 4, conserved site CH48_2639 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal CH48_264 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CH48_264 IPR005467 Histidine kinase domain CH48_264 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal CH48_264 IPR011006 CheY-like superfamily CH48_264 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CH48_264 IPR001789 Signal transduction response regulator, receiver domain CH48_264 IPR038388 RcsC, C-terminal domain superfamily CH48_264 IPR003594 Histidine kinase/HSP90-like ATPase CH48_264 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CH48_264 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH48_264 IPR030856 Sensor histidine kinase RcsC CH48_2640 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal CH48_2640 IPR012349 FMN-binding split barrel CH48_2640 IPR023787 Type III secretion system flagellar brake protein YcgR CH48_2640 IPR009875 PilZ domain CH48_2641 IPR009342 Putative carbohydrate binding domain CH48_2641 IPR008928 Six-hairpin glycosidase superfamily CH48_2641 IPR019282 Domain of unknown function DUF2329 CH48_2641 IPR011013 Galactose mutarotase-like domain superfamily CH48_2641 IPR033432 Glycosyl hydrolase 36, catalytic domain CH48_2641 IPR037824 NdvB, GH94N domain 2 CH48_2641 IPR037820 NdvB, GH94N domain 1 CH48_2641 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily CH48_2641 IPR010383 Glycosyl hydrolase 94 CH48_2641 IPR012341 Six-hairpin glycosidase-like superfamily CH48_2644 IPR013216 Methyltransferase type 11 CH48_2644 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH48_2648 IPR037066 TonB-dependent receptor, plug domain superfamily CH48_2648 IPR010105 TonB-dependent siderophore receptor CH48_2648 IPR012910 TonB-dependent receptor, plug domain CH48_2648 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CH48_2648 IPR000531 TonB-dependent receptor-like, beta-barrel CH48_2648 IPR039423 TonB-dependent receptor-like CH48_2649 IPR031322 Shikimate kinase/gluconokinase CH48_2649 IPR000623 Shikimate kinase/Threonine synthase-like 1 CH48_2649 IPR027544 Shikimate kinase 2 CH48_2649 IPR023000 Shikimate kinase, conserved site CH48_2649 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_2650 IPR009664 Pyrimidine/purine nucleoside phosphorylase CH48_2650 IPR014710 RmlC-like jelly roll fold CH48_2650 IPR011051 RmlC-like cupin domain superfamily CH48_2651 IPR007476 Putative exonuclease, RdgC CH48_2652 IPR000600 ROK family CH48_2653 IPR004592 Nuclease SbcC, gammaproteobacteria type CH48_2653 IPR038729 Rad50/SbcC-type AAA domain CH48_2653 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_2654 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CH48_2654 IPR029052 Metallo-dependent phosphatase-like CH48_2654 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain CH48_2654 IPR004593 Nuclease SbcCD subunit D CH48_2654 IPR026843 Nuclease SbcCD subunit D, C-terminal domain CH48_2655 IPR001867 OmpR/PhoB-type DNA-binding domain CH48_2655 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB CH48_2655 IPR001789 Signal transduction response regulator, receiver domain CH48_2655 IPR039420 Transcriptional regulatory protein WalR-like CH48_2655 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_2655 IPR011006 CheY-like superfamily CH48_2656 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR CH48_2656 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CH48_2656 IPR021766 Phosphate regulon sensor protein PhoR CH48_2656 IPR013767 PAS fold CH48_2656 IPR035965 PAS domain superfamily CH48_2656 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CH48_2656 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CH48_2656 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH48_2656 IPR003594 Histidine kinase/HSP90-like ATPase CH48_2656 IPR000014 PAS domain CH48_2656 IPR005467 Histidine kinase domain CH48_2657 IPR024370 PBP domain CH48_2657 IPR011862 Phosphate binding protein CH48_2658 IPR004685 Branched-chain amino acid transport system II carrier protein CH48_2659 IPR004840 Amino acid permease, conserved site CH48_2659 IPR004841 Amino acid permease/ SLC12A domain CH48_266 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat CH48_266 IPR005743 DNA gyrase, subunit A CH48_266 IPR013760 DNA topoisomerase, type IIA-like domain superfamily CH48_266 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CH48_266 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta CH48_266 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal CH48_266 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily CH48_2660 IPR017069 Maltodextrin glucosidase CH48_2660 IPR014756 Immunoglobulin E-set CH48_2660 IPR017853 Glycoside hydrolase superfamily CH48_2660 IPR013780 Glycosyl hydrolase, all-beta CH48_2660 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain CH48_2660 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CH48_2661 IPR036291 NAD(P)-binding domain superfamily CH48_2661 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase CH48_2661 IPR020904 Short-chain dehydrogenase/reductase, conserved site CH48_2661 IPR002347 Short-chain dehydrogenase/reductase SDR CH48_2662 IPR000101 Gamma-glutamyltranspeptidase CH48_2662 IPR029055 Nucleophile aminohydrolases, N-terminal CH48_2663 IPR018084 Hok/gef cell toxic protein, conserved site CH48_2663 IPR000021 Hok/gef cell toxic protein CH48_2664 IPR036249 Thioredoxin-like superfamily CH48_2664 IPR019479 Peroxiredoxin, C-terminal CH48_2664 IPR024706 Peroxiredoxin, AhpC-type CH48_2664 IPR013766 Thioredoxin domain CH48_2664 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CH48_2665 IPR007431 Acyl carrier protein phosphodiesterase CH48_2665 IPR023491 Acyl carrier protein phosphodiesterase, gammaproteobacteria CH48_2666 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA CH48_2666 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily CH48_2666 IPR042119 QueA, domain 2 CH48_2666 IPR042118 QueA, domain 1 CH48_2669 IPR004803 tRNA-guanine transglycosylase CH48_2669 IPR002616 tRNA-guanine(15) transglycosylase-like CH48_2669 IPR036511 Queuine tRNA-ribosyltransferase-like CH48_267 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH48_267 IPR010233 Ubiquinone biosynthesis O-methyltransferase CH48_2670 IPR003849 Preprotein translocase YajC CH48_2671 IPR027398 SecD export protein N-terminal TM domain CH48_2671 IPR005791 Protein translocase subunit SecD CH48_2671 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CH48_2671 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CH48_2671 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CH48_2672 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CH48_2672 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CH48_2672 IPR005665 Protein-export membrane protein SecF, bacterial CH48_2672 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CH48_2676 IPR005144 ATP-cone domain CH48_2676 IPR003796 Ribonucleotide reductase regulator NrdR-like CH48_2677 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal CH48_2677 IPR011549 Riboflavin-specific deaminase, C-terminal CH48_2677 IPR002125 Cytidine and deoxycytidylate deaminase domain CH48_2677 IPR024072 Dihydrofolate reductase-like domain superfamily CH48_2677 IPR016192 APOBEC/CMP deaminase, zinc-binding CH48_2677 IPR004794 Riboflavin biosynthesis protein RibD CH48_2677 IPR016193 Cytidine deaminase-like CH48_2678 IPR036467 Lumazine/riboflavin synthase superfamily CH48_2678 IPR034964 Lumazine synthase CH48_2678 IPR002180 Lumazine/riboflavin synthase CH48_2679 IPR011605 NusB antitermination factor CH48_2679 IPR006027 NusB/RsmB/TIM44 CH48_2679 IPR035926 NusB-like superfamily CH48_268 IPR000788 Ribonucleotide reductase large subunit, C-terminal CH48_268 IPR005144 ATP-cone domain CH48_268 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal CH48_268 IPR039718 Ribonucleoside-diphosphate reductase large subunit CH48_268 IPR013346 Ribonucleotide reductase, class I , alpha subunit CH48_268 IPR013509 Ribonucleotide reductase large subunit, N-terminal CH48_2680 IPR006283 Thiamine-monophosphate kinase CH48_2680 IPR036676 PurM-like, C-terminal domain superfamily CH48_2680 IPR036921 PurM-like, N-terminal domain superfamily CH48_2680 IPR010918 PurM-like, C-terminal domain CH48_2680 IPR016188 PurM-like, N-terminal domain CH48_2681 IPR026037 Phosphatidylglycerophosphatase A CH48_2681 IPR036681 PgpA-like superfamily CH48_2681 IPR007686 YutG/PgpA domain CH48_2683 IPR005477 Deoxyxylulose-5-phosphate synthase CH48_2683 IPR029061 Thiamin diphosphate-binding fold CH48_2683 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II CH48_2683 IPR005475 Transketolase-like, pyrimidine-binding domain CH48_2683 IPR020826 Transketolase binding site CH48_2683 IPR033248 Transketolase, C-terminal domain CH48_2684 IPR000092 Polyprenyl synthetase CH48_2684 IPR033749 Polyprenyl synthetase, conserved site CH48_2684 IPR008949 Isoprenoid synthase domain superfamily CH48_2685 IPR003761 Exonuclease VII, small subunit CH48_2685 IPR037004 Exonuclease VII, small subunit superfamily CH48_2686 IPR001763 Rhodanese-like domain CH48_2686 IPR004114 THUMP domain CH48_2686 IPR020536 Thil, AANH domain CH48_2686 IPR026340 Thiazole biosynthesis domain CH48_2686 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH48_2686 IPR003720 tRNA sulfurtransferase ThiI CH48_2686 IPR036873 Rhodanese-like domain superfamily CH48_2687 IPR002818 DJ-1/PfpI CH48_2687 IPR029062 Class I glutamine amidotransferase-like CH48_2687 IPR006287 Protein/nucleic acid deglycase DJ-1 CH48_2688 IPR003710 Ketopantoate reductase ApbA/PanE CH48_2688 IPR013332 Ketopantoate reductase, N-terminal domain CH48_2688 IPR036291 NAD(P)-binding domain superfamily CH48_2688 IPR013752 Ketopantoate reductase, C-terminal domain CH48_2688 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CH48_2688 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CH48_2689 IPR007551 Protein of unknown function DUF520 CH48_2689 IPR035570 UPF0234, N-terminal CH48_2689 IPR035571 UPF0234-like, C-terminal CH48_2689 IPR036183 YajQ-like superfamily CH48_269 IPR000358 Ribonucleotide reductase small subunit family CH48_269 IPR033909 Ribonucleotide reductase small subunit CH48_269 IPR030475 Ribonucleotide reductase small subunit, acitve site CH48_269 IPR009078 Ferritin-like superfamily CH48_269 IPR012348 Ribonucleotide reductase-like CH48_2690 IPR036259 MFS transporter superfamily CH48_2690 IPR011701 Major facilitator superfamily CH48_2690 IPR020846 Major facilitator superfamily domain CH48_2691 IPR030470 UbiA prenyltransferase conserved site CH48_2691 IPR000537 UbiA prenyltransferase family CH48_2691 IPR006369 Protohaem IX farnesyltransferase CH48_2692 IPR014210 Cytochrome o ubiquinol oxidase subunit IV CH48_2692 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes CH48_2693 IPR024791 Cytochrome c oxidase subunit III CH48_2693 IPR014206 Cytochrome o ubiquinol oxidase, subunit III CH48_2693 IPR033946 Ubiquinol oxidase subunit III domain CH48_2693 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle CH48_2693 IPR035973 Cytochrome c oxidase subunit III-like superfamily CH48_2693 IPR000298 Cytochrome c oxidase subunit III-like CH48_2694 IPR036927 Cytochrome c oxidase-like, subunit I superfamily CH48_2694 IPR000883 Cytochrome c oxidase subunit I CH48_2694 IPR014207 Cytochrome o ubiquinol oxidase, subunit I CH48_2694 IPR023616 Cytochrome c oxidase-like, subunit I domain CH48_2694 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site CH48_2695 IPR006333 Cytochrome o ubiquinol oxidase subunit II CH48_2695 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily CH48_2695 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain CH48_2695 IPR034227 Ubiquinol oxidase subunit 2, cupredoxin domain CH48_2695 IPR008972 Cupredoxin CH48_2695 IPR010514 COX aromatic rich motif CH48_2695 IPR002429 Cytochrome c oxidase subunit II-like C-terminal CH48_2696 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily CH48_2696 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like CH48_2697 IPR011701 Major facilitator superfamily CH48_2697 IPR020846 Major facilitator superfamily domain CH48_2697 IPR036259 MFS transporter superfamily CH48_2697 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 CH48_2698 IPR012640 Membrane lipoprotein, lipid attachment site CH48_2698 IPR005619 Uncharacterised protein family, YajG CH48_2699 IPR036065 BolA-like superfamily CH48_2699 IPR002634 BolA protein CH48_27 IPR000792 Transcription regulator LuxR, C-terminal CH48_27 IPR001789 Signal transduction response regulator, receiver domain CH48_27 IPR011006 CheY-like superfamily CH48_27 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_270 IPR012675 Beta-grasp domain superfamily CH48_270 IPR036010 2Fe-2S ferredoxin-like superfamily CH48_270 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CH48_270 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CH48_2700 IPR036611 Trigger factor ribosome-binding domain superfamily CH48_2700 IPR008881 Trigger factor, ribosome-binding, bacterial CH48_2700 IPR037041 Trigger factor, C-terminal domain superfamily CH48_2700 IPR008880 Trigger factor, C-terminal CH48_2700 IPR027304 Trigger factor/SurA domain superfamily CH48_2700 IPR005215 Trigger factor CH48_2700 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CH48_2701 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CH48_2701 IPR029045 ClpP/crotonase-like domain superfamily CH48_2701 IPR001907 ATP-dependent Clp protease proteolytic subunit CH48_2701 IPR018215 ClpP, Ser active site CH48_2701 IPR033135 ClpP, histidine active site CH48_2702 IPR038366 Zinc finger, ClpX C4-type superfamily CH48_2702 IPR003593 AAA+ ATPase domain CH48_2702 IPR003959 ATPase, AAA-type, core CH48_2702 IPR019489 Clp ATPase, C-terminal CH48_2702 IPR004487 Clp protease, ATP-binding subunit ClpX CH48_2702 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_2702 IPR010603 Zinc finger, ClpX C4-type CH48_2703 IPR027065 Lon protease CH48_2703 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CH48_2703 IPR008269 Peptidase S16, Lon proteolytic domain CH48_2703 IPR004815 Lon protease, bacterial/eukaryotic-type CH48_2703 IPR027543 Lon protease, bacterial CH48_2703 IPR003111 Lon, substrate-binding domain CH48_2703 IPR020568 Ribosomal protein S5 domain 2-type fold CH48_2703 IPR015947 PUA-like superfamily CH48_2703 IPR008268 Peptidase S16, active site CH48_2703 IPR003959 ATPase, AAA-type, core CH48_2703 IPR003593 AAA+ ATPase domain CH48_2703 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_2704 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily CH48_2704 IPR020816 Histone-like DNA-binding protein, conserved site CH48_2704 IPR000119 Histone-like DNA-binding protein CH48_2706 IPR027304 Trigger factor/SurA domain superfamily CH48_2706 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site CH48_2706 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type CH48_2707 IPR004509 Competence protein ComEA, helix-hairpin-helix domain CH48_2707 IPR010994 RuvA domain 2-like CH48_2708 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family CH48_2708 IPR029069 HotDog domain superfamily CH48_2709 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH48_2709 IPR018317 Queuosine biosynthesis protein QueC CH48_271 IPR023084 Proteinase inhibitor I11, ecotin, gammaproteobacteria CH48_271 IPR036198 Ecotin superfamily CH48_271 IPR005658 Proteinase inhibitor I11, ecotin CH48_2710 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain CH48_2710 IPR039424 Solute-binding protein family 5 CH48_2710 IPR000914 Solute-binding protein family 5 domain CH48_2711 IPR023214 HAD superfamily CH48_2711 IPR036412 HAD-like superfamily CH48_2711 IPR023938 HMP-PP phosphatase CH48_2711 IPR000150 Cof family CH48_2711 IPR006379 HAD-superfamily hydrolase, subfamily IIB CH48_2713 IPR011991 ArsR-like helix-turn-helix domain CH48_2713 IPR000485 AsnC-type HTH domain CH48_2713 IPR011008 Dimeric alpha-beta barrel CH48_2713 IPR019888 Transcription regulator AsnC-type CH48_2713 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_2713 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CH48_2713 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CH48_2713 IPR036390 Winged helix DNA-binding domain superfamily CH48_2714 IPR003593 AAA+ ATPase domain CH48_2714 IPR011527 ABC transporter type 1, transmembrane domain CH48_2714 IPR003439 ABC transporter-like CH48_2714 IPR017871 ABC transporter, conserved site CH48_2714 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_2714 IPR039421 Type I protein exporter CH48_2714 IPR036640 ABC transporter type 1, transmembrane domain superfamily CH48_2715 IPR003593 AAA+ ATPase domain CH48_2715 IPR036640 ABC transporter type 1, transmembrane domain superfamily CH48_2715 IPR003439 ABC transporter-like CH48_2715 IPR017871 ABC transporter, conserved site CH48_2715 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_2715 IPR039421 Type I protein exporter CH48_2715 IPR011527 ABC transporter type 1, transmembrane domain CH48_2716 IPR002332 Nitrogen regulatory protein P-II, urydylation site CH48_2716 IPR017918 Nitrogen regulatory protein PII, conserved site CH48_2716 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CH48_2716 IPR011322 Nitrogen regulatory PII-like, alpha/beta CH48_2716 IPR002187 Nitrogen regulatory protein PII CH48_2717 IPR001905 Ammonium transporter CH48_2717 IPR018047 Ammonium transporter, conserved site CH48_2717 IPR024041 Ammonium transporter AmtB-like domain CH48_2717 IPR029020 Ammonium/urea transporter CH48_2718 IPR003703 Acyl-CoA thioesterase CH48_2718 IPR029069 HotDog domain superfamily CH48_2719 IPR039366 YscW/ExsB CH48_272 IPR000209 Peptidase S8/S53 domain CH48_272 IPR036852 Peptidase S8/S53 domain superfamily CH48_272 IPR023827 Peptidase S8, subtilisin, Asp-active site CH48_272 IPR022398 Peptidase S8, subtilisin, His-active site CH48_272 IPR023828 Peptidase S8, subtilisin, Ser-active site CH48_272 IPR015500 Peptidase S8, subtilisin-related CH48_272 IPR013783 Immunoglobulin-like fold CH48_272 IPR034063 Fervidolysin domain CH48_272 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily CH48_2720 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_2720 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain CH48_2720 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding CH48_2721 IPR036666 HHA superfamily CH48_2721 IPR007985 Haemolysin expression modulating, HHA CH48_2722 IPR019693 Biofilm formation regulator YbaJ CH48_2725 IPR003593 AAA+ ATPase domain CH48_2725 IPR003439 ABC transporter-like CH48_2725 IPR017871 ABC transporter, conserved site CH48_2725 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_2726 IPR037294 ABC transporter, BtuC-like CH48_2726 IPR001626 ABC transporter, TroCD-like CH48_2727 IPR006128 Adhesion lipoprotein CH48_2727 IPR006129 Adhesin B CH48_2727 IPR006127 Periplasmic solute binding protein, ZnuA-like CH48_2728 IPR035977 Ribosomal protein L36 superfamily CH48_2728 IPR000473 Ribosomal protein L36 CH48_2729 IPR042105 Ribosomal protein L31 superfamily CH48_2729 IPR034704 L28p-like CH48_2729 IPR027493 Ribosomal protein L31 type B CH48_2729 IPR002150 Ribosomal protein L31 CH48_2731 IPR021238 Protein of unknown function DUF2620 CH48_2732 IPR017850 Alkaline-phosphatase-like, core domain superfamily CH48_2732 IPR006124 Metalloenzyme CH48_2732 IPR024052 Phosphopentomutase DeoB cap domain superfamily CH48_2732 IPR010045 Phosphopentomutase CH48_2733 IPR001608 Alanine racemase, N-terminal CH48_2733 IPR029066 PLP-binding barrel CH48_2735 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CH48_2735 IPR001036 Acriflavin resistance protein CH48_2735 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 CH48_2736 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CH48_2736 IPR006143 RND efflux pump, membrane fusion protein CH48_2737 IPR001647 DNA-binding HTH domain, TetR-type CH48_2737 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CH48_2737 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CH48_2737 IPR013572 Transcription regulator MAATS, C-terminal CH48_2737 IPR009057 Homeobox-like domain superfamily CH48_2738 IPR027396 DsrEFH-like CH48_2738 IPR003787 Sulphur relay, DsrE/F-like protein CH48_2740 IPR006686 Mechanosensitive ion channel MscS, conserved site CH48_2740 IPR023298 P-type ATPase, transmembrane domain superfamily CH48_2740 IPR010920 LSM domain superfamily CH48_2740 IPR025692 Mechanosensitive ion channel inner membrane domain 1 CH48_2740 IPR023408 Mechanosensitive ion channel MscS domain superfamily CH48_2740 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 CH48_2740 IPR024393 Mechanosensitive ion channel MscS, porin domain CH48_2740 IPR006685 Mechanosensitive ion channel MscS CH48_2740 IPR011066 Mechanosensitive ion channel MscS, C-terminal CH48_2742 IPR007401 Protein of unknown function DUF454 CH48_2743 IPR005764 Adenine phosphoribosyl transferase CH48_2743 IPR029057 Phosphoribosyltransferase-like CH48_2743 IPR000836 Phosphoribosyltransferase domain CH48_2744 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal CH48_2744 IPR022754 DNA polymerase III, gamma subunit, domain III CH48_2744 IPR001270 ClpA/B family CH48_2744 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV CH48_2744 IPR012763 DNA polymerase III, subunit gamma/ tau CH48_2744 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_2744 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily CH48_2744 IPR003593 AAA+ ATPase domain CH48_2744 IPR021029 DNA polymerase III, tau subunit, domain V CH48_2745 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily CH48_2745 IPR004401 Nucleoid-associated protein YbaB/EbfC family CH48_2746 IPR015967 Recombination protein RecR, conserved site CH48_2746 IPR006171 TOPRIM domain CH48_2746 IPR023627 Recombination protein RecR CH48_2746 IPR000093 DNA recombination protein RecR CH48_2746 IPR034137 RecR, TOPRIM domain CH48_2746 IPR023628 Recombination protein RecR, C4-type zinc finger CH48_2747 IPR020568 Ribosomal protein S5 domain 2-type fold CH48_2747 IPR020575 Heat shock protein Hsp90, N-terminal CH48_2747 IPR001404 Heat shock protein Hsp90 family CH48_2747 IPR037196 HSP90, C-terminal domain CH48_2747 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH48_2747 IPR003594 Histidine kinase/HSP90-like ATPase CH48_2747 IPR019805 Heat shock protein Hsp90, conserved site CH48_2748 IPR007862 Adenylate kinase, active site lid domain CH48_2748 IPR033690 Adenylate kinase, conserved site CH48_2748 IPR000850 Adenylate kinase/UMP-CMP kinase CH48_2748 IPR006259 Adenylate kinase subfamily CH48_2748 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_2749 IPR033659 Ferrochelatase, N-terminal CH48_2749 IPR033644 Ferrochelatase, C-terminal CH48_2749 IPR019772 Ferrochelatase, active site CH48_2749 IPR001015 Ferrochelatase CH48_275 IPR036653 CinA-like, C-terminal CH48_275 IPR008135 Competence-induced protein CinA CH48_275 IPR036425 MoaB/Mog-like domain superfamily CH48_275 IPR001453 MoaB/Mog domain CH48_2750 IPR002797 Polysaccharide biosynthesis protein CH48_2751 IPR029044 Nucleotide-diphospho-sugar transferases CH48_2751 IPR001173 Glycosyltransferase 2-like CH48_2751 IPR002495 Glycosyl transferase, family 8 CH48_2752 IPR029044 Nucleotide-diphospho-sugar transferases CH48_2752 IPR001173 Glycosyltransferase 2-like CH48_2753 IPR001296 Glycosyl transferase, family 1 CH48_2753 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CH48_2755 IPR000715 Glycosyl transferase, family 4 CH48_2755 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site CH48_2756 IPR036291 NAD(P)-binding domain superfamily CH48_2756 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH48_2756 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain CH48_2757 IPR001296 Glycosyl transferase, family 1 CH48_2757 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CH48_2758 IPR016040 NAD(P)-binding domain CH48_2758 IPR005886 UDP-glucose 4-epimerase CH48_2758 IPR036291 NAD(P)-binding domain superfamily CH48_2759 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CH48_2759 IPR011611 Carbohydrate kinase PfkB CH48_2759 IPR029056 Ribokinase-like CH48_276 IPR013059 Tryptophan/tyrosine transporter CH48_276 IPR018227 Amino acid/polyamine transporter 2 CH48_276 IPR013061 Tryptophan/tryrosine permease, conserved site CH48_2760 IPR004771 K+/H+ exchanger CH48_2760 IPR036291 NAD(P)-binding domain superfamily CH48_2760 IPR003148 Regulator of K+ conductance, N-terminal CH48_2760 IPR006153 Cation/H+ exchanger CH48_2760 IPR038770 Sodium/solute symporter superfamily CH48_2761 IPR036259 MFS transporter superfamily CH48_2761 IPR020846 Major facilitator superfamily domain CH48_2761 IPR011701 Major facilitator superfamily CH48_2762 IPR036907 5'-Nucleotidase, C-terminal domain superfamily CH48_2762 IPR029052 Metallo-dependent phosphatase-like CH48_2762 IPR006146 5'-Nucleotidase, conserved site CH48_2762 IPR006179 5'-Nucleotidase/apyrase CH48_2762 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CH48_2762 IPR008334 5'-Nucleotidase, C-terminal CH48_2764 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC CH48_2764 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily CH48_2764 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain CH48_2765 IPR002816 TraB family CH48_2766 IPR008250 P-type ATPase, A domain superfamily CH48_2766 IPR001757 P-type ATPase CH48_2766 IPR027256 P-type ATPase, subfamily IB CH48_2766 IPR023298 P-type ATPase, transmembrane domain superfamily CH48_2766 IPR018303 P-type ATPase, phosphorylation site CH48_2766 IPR023299 P-type ATPase, cytoplasmic domain N CH48_2766 IPR023214 HAD superfamily CH48_2766 IPR036163 Heavy metal-associated domain superfamily CH48_2766 IPR036412 HAD-like superfamily CH48_2766 IPR017969 Heavy-metal-associated, conserved site CH48_2766 IPR006121 Heavy metal-associated domain, HMA CH48_2767 IPR009061 Putative DNA-binding domain superfamily CH48_2767 IPR011789 Cu(I)-responsive transcriptional regulator CH48_2767 IPR000551 MerR-type HTH domain CH48_2768 IPR002810 NfeD-like, C-terminal domain CH48_2769 IPR032435 Band 7, C-terminal extension CH48_2769 IPR018080 Band 7/stomatin-like, conserved site CH48_2769 IPR036013 Band 7/SPFH domain superfamily CH48_2769 IPR001107 Band 7 domain CH48_2769 IPR001972 Stomatin family CH48_277 IPR009998 YfaZ CH48_277 IPR023614 Porin domain superfamily CH48_277 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CH48_2770 IPR011990 Tetratricopeptide-like helical domain superfamily CH48_2770 IPR013766 Thioredoxin domain CH48_2770 IPR036249 Thioredoxin-like superfamily CH48_2771 IPR036291 NAD(P)-binding domain superfamily CH48_2771 IPR020904 Short-chain dehydrogenase/reductase, conserved site CH48_2771 IPR002347 Short-chain dehydrogenase/reductase SDR CH48_2772 IPR036514 SGNH hydrolase superfamily CH48_2772 IPR013830 SGNH hydrolase-type esterase domain CH48_2772 IPR008265 Lipase, GDSL, active site CH48_2773 IPR017871 ABC transporter, conserved site CH48_2773 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_2773 IPR003439 ABC transporter-like CH48_2773 IPR003593 AAA+ ATPase domain CH48_2774 IPR038766 Membrane component of ABC transporter, predicted CH48_2775 IPR011054 Rudiment single hybrid motif CH48_2775 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type CH48_2775 IPR013815 ATP-grasp fold, subdomain 1 CH48_2775 IPR016185 Pre-ATP-grasp domain superfamily CH48_2775 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit CH48_2775 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain CH48_2775 IPR011761 ATP-grasp fold CH48_2776 IPR033747 Class I PurE CH48_2776 IPR000031 PurE domain CH48_2776 IPR024694 PurE, prokaryotic type CH48_2776 IPR035893 PurE domain superfamily CH48_2777 IPR010138 UDP-2,3-diacylglucosamine hydrolase CH48_2777 IPR029052 Metallo-dependent phosphatase-like CH48_2777 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CH48_2778 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site CH48_2778 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase CH48_2778 IPR029000 Cyclophilin-like domain superfamily CH48_2778 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain CH48_2779 IPR032678 tRNA synthetases class I, catalytic domain CH48_2779 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CH48_2779 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase CH48_2779 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR CH48_2779 IPR015803 Cysteine-tRNA ligase CH48_2779 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH48_278 IPR002226 Catalase haem-binding site CH48_278 IPR018028 Catalase, mono-functional, haem-containing CH48_278 IPR040333 Catalase, clade 3 CH48_278 IPR024708 Catalase active site CH48_278 IPR011614 Catalase core domain CH48_278 IPR020835 Catalase superfamily CH48_278 IPR010582 Catalase immune-responsive domain CH48_278 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 CH48_278 IPR037060 Catalase core domain superfamily CH48_2780 IPR002942 RNA-binding S4 domain CH48_2780 IPR036986 RNA-binding S4 domain superfamily CH48_2781 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site CH48_2781 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase CH48_2781 IPR036291 NAD(P)-binding domain superfamily CH48_2781 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CH48_2781 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CH48_2783 IPR013762 Integrase-like, catalytic domain superfamily CH48_2783 IPR010998 Integrase/recombinase, N-terminal CH48_2783 IPR002104 Integrase, catalytic domain CH48_2783 IPR011010 DNA breaking-rejoining enzyme, catalytic core CH48_2784 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_2784 IPR002611 IstB-like ATP-binding protein CH48_2784 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CH48_2784 IPR001270 ClpA/B family CH48_2784 IPR003593 AAA+ ATPase domain CH48_2788 IPR039420 Transcriptional regulatory protein WalR-like CH48_2788 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_2788 IPR011006 CheY-like superfamily CH48_2788 IPR001867 OmpR/PhoB-type DNA-binding domain CH48_2788 IPR001789 Signal transduction response regulator, receiver domain CH48_2788 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response CH48_279 IPR010192 2-succinylbenzoate--CoA ligase CH48_279 IPR000873 AMP-dependent synthetase/ligase CH48_279 IPR042099 AMP-dependent synthetase-like superfamily CH48_279 IPR025110 AMP-binding enzyme, C-terminal domain CH48_279 IPR020845 AMP-binding, conserved site CH48_2791 IPR039994 JmjC domain-containing CH48_2791 IPR003347 JmjC domain CH48_2792 IPR005921 Histidine ammonia-lyase CH48_2792 IPR008948 L-Aspartase-like CH48_2792 IPR022313 Phenylalanine/histidine ammonia-lyases, active site CH48_2792 IPR001106 Aromatic amino acid lyase CH48_2792 IPR024083 Fumarase/histidase, N-terminal CH48_2793 IPR032903 UbiD-like decarboxylase/ferulic acid decarboxylase 1 CH48_2793 IPR002830 UbiD decarboxylyase family CH48_2795 IPR039421 Type I protein exporter CH48_2795 IPR017871 ABC transporter, conserved site CH48_2795 IPR003439 ABC transporter-like CH48_2795 IPR036640 ABC transporter type 1, transmembrane domain superfamily CH48_2795 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_2795 IPR011527 ABC transporter type 1, transmembrane domain CH48_2795 IPR003593 AAA+ ATPase domain CH48_2798 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CH48_2798 IPR029052 Metallo-dependent phosphatase-like CH48_2798 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase CH48_28 IPR004960 Bacterial lipid A biosynthesis acyltransferase CH48_28 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase CH48_280 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CH48_280 IPR029017 Enolase-like, N-terminal CH48_280 IPR029065 Enolase C-terminal domain-like CH48_280 IPR010196 o-Succinylbenzoate synthase, MenC type1 CH48_280 IPR036849 Enolase-like, C-terminal domain superfamily CH48_2800 IPR000792 Transcription regulator LuxR, C-terminal CH48_2800 IPR016032 Signal transduction response regulator, C-terminal effector CH48_2801 IPR012156 Cold shock, CspA CH48_2801 IPR011129 Cold shock domain CH48_2801 IPR002059 Cold-shock protein, DNA-binding CH48_2801 IPR012340 Nucleic acid-binding, OB-fold CH48_2801 IPR019844 Cold-shock (CSD) domain CH48_2802 IPR012340 Nucleic acid-binding, OB-fold CH48_2802 IPR002059 Cold-shock protein, DNA-binding CH48_2802 IPR019844 Cold-shock (CSD) domain CH48_2802 IPR012156 Cold shock, CspA CH48_2802 IPR011129 Cold shock domain CH48_2803 IPR003691 Putative fluoride ion transporter CrcB CH48_2804 IPR000160 GGDEF domain CH48_2804 IPR007894 MASE2 CH48_2804 IPR029787 Nucleotide cyclase CH48_2805 IPR003369 Sec-independent protein translocase protein TatA/B/E CH48_2805 IPR006312 Sec-independent protein translocase protein TatA/E CH48_2805 IPR024905 Sec-independent protein translocase protein TatE CH48_2806 IPR006638 Elp3/MiaB/NifB CH48_2806 IPR013785 Aldolase-type TIM barrel CH48_2806 IPR007197 Radical SAM CH48_2806 IPR003698 Lipoyl synthase CH48_2806 IPR031691 Lipoyl synthase, N-terminal CH48_2807 IPR020605 Octanoyltransferase, conserved site CH48_2807 IPR000544 Octanoyltransferase CH48_2807 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain CH48_2808 IPR027471 YbeD-like domain superfamily CH48_2808 IPR007454 Uncharacterised protein family UPF0250 CH48_2809 IPR012338 Beta-lactamase/transpeptidase-like CH48_2809 IPR015956 Penicillin-binding protein, C-terminal domain superfamily CH48_2809 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A CH48_2809 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal CH48_2809 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily CH48_2809 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal CH48_281 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB CH48_281 IPR029045 ClpP/crotonase-like domain superfamily CH48_281 IPR001753 Enoyl-CoA hydratase/isomerase CH48_281 IPR014748 Enoyl-CoA hydratase, C-terminal CH48_281 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CH48_2810 IPR007730 Sporulation-like domain CH48_2810 IPR034718 Endolytic peptidoglycan transglycosylase RlpA CH48_2810 IPR036908 RlpA-like domain superfamily CH48_2810 IPR009009 RlpA-like protein, double-psi beta-barrel domain CH48_2810 IPR036680 Sporulation-like domain superfamily CH48_2810 IPR012997 Rare lipoprotein A CH48_2811 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB CH48_2811 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA CH48_2811 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site CH48_2812 IPR012338 Beta-lactamase/transpeptidase-like CH48_2812 IPR005311 Penicillin-binding protein, dimerisation domain CH48_2812 IPR001460 Penicillin-binding protein, transpeptidase CH48_2812 IPR017790 Penicillin-binding protein 2 CH48_2812 IPR036138 Penicillin-binding protein, dimerisation domain superfamily CH48_2813 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CH48_2813 IPR029028 Alpha/beta knot methyltransferases CH48_2813 IPR003742 RNA methyltransferase RlmH CH48_2814 IPR004394 Protein Iojap/ribosomal silencing factor RsfS CH48_2815 IPR004821 Cytidyltransferase-like domain CH48_2815 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase CH48_2815 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH48_2816 IPR005790 DNA polymerase III, delta subunit CH48_2816 IPR032780 DNA polymerase III subunit delta, C-terminal CH48_2816 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal CH48_2816 IPR010372 DNA polymerase III delta, N-terminal CH48_2816 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_2817 IPR007485 LPS-assembly lipoprotein LptE CH48_2818 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH48_2818 IPR002300 Aminoacyl-tRNA synthetase, class Ia CH48_2818 IPR002302 Leucine-tRNA ligase CH48_2818 IPR025709 Leucyl-tRNA synthetase, editing domain CH48_2818 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain CH48_2818 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding CH48_2818 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CH48_2818 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CH48_2819 IPR009912 Zinc-ribbon containing domain CH48_282 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase CH48_282 IPR000073 Alpha/beta hydrolase fold-1 CH48_282 IPR029058 Alpha/Beta hydrolase fold CH48_2820 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_2820 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type CH48_2820 IPR003593 AAA+ ATPase domain CH48_2820 IPR003439 ABC transporter-like CH48_2820 IPR017871 ABC transporter, conserved site CH48_2821 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CH48_2821 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CH48_2821 IPR035906 MetI-like superfamily CH48_2821 IPR030205 Glutamate/aspartate transport system permease protein GltK/AatM CH48_2822 IPR035906 MetI-like superfamily CH48_2822 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CH48_2822 IPR030202 Glutamate/aspartate transport system permease protein GltJ/AatQ CH48_2822 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CH48_2823 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CH48_2825 IPR036526 Carbon-nitrogen hydrolase superfamily CH48_2825 IPR003010 Carbon-nitrogen hydrolase CH48_2825 IPR004563 Apolipoprotein N-acyltransferase CH48_2826 IPR036318 FAD-binding, type PCMH-like superfamily CH48_2826 IPR016169 FAD-binding, type PCMH, subdomain 2 CH48_2826 IPR005170 Transporter-associated domain CH48_2826 IPR000644 CBS domain CH48_2827 IPR023091 Metalloprotease catalytic domain superfamily, predicted CH48_2827 IPR002036 Endoribonuclease YbeY CH48_2827 IPR020549 Endoribonuclease YbeY, conserved site CH48_2828 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_2828 IPR003714 PhoH-like protein CH48_2829 IPR007197 Radical SAM CH48_2829 IPR023404 Radical SAM, alpha/beta horseshoe CH48_2829 IPR038135 Methylthiotransferase, N-terminal domain superfamily CH48_2829 IPR013848 Methylthiotransferase, N-terminal CH48_2829 IPR020612 Methylthiotransferase, conserved site CH48_2829 IPR005839 Methylthiotransferase CH48_2829 IPR002792 TRAM domain CH48_2829 IPR006638 Elp3/MiaB/NifB CH48_2829 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB CH48_283 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CH48_283 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase CH48_283 IPR029035 DHS-like NAD/FAD-binding domain superfamily CH48_283 IPR032264 Menaquinone biosynthesis protein MenD, middle domain CH48_283 IPR029061 Thiamin diphosphate-binding fold CH48_283 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CH48_2830 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 CH48_2830 IPR036188 FAD/NAD(P)-binding domain superfamily CH48_2830 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site CH48_2830 IPR002938 FAD-binding domain CH48_2837 IPR033738 Asparagine synthase, N-terminal domain CH48_2837 IPR017932 Glutamine amidotransferase type 2 domain CH48_2837 IPR001962 Asparagine synthase CH48_2837 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH48_2837 IPR006426 Asparagine synthase, glutamine-hydrolyzing CH48_2837 IPR029055 Nucleophile aminohydrolases, N-terminal CH48_2838 IPR036412 HAD-like superfamily CH48_2838 IPR006357 HAD-superfamily hydrolase, subfamily IIA CH48_2838 IPR023214 HAD superfamily CH48_2839 IPR036390 Winged helix DNA-binding domain superfamily CH48_2839 IPR000835 MarR-type HTH domain CH48_2839 IPR000600 ROK family CH48_2839 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_284 IPR034681 Isochorismate synthase MenF CH48_284 IPR004561 Isochorismate synthase CH48_284 IPR015890 Chorismate-utilising enzyme, C-terminal CH48_284 IPR005801 ADC synthase CH48_2840 IPR003764 N-acetylglucosamine-6-phosphate deacetylase CH48_2840 IPR006680 Amidohydrolase-related CH48_2840 IPR011059 Metal-dependent hydrolase, composite domain superfamily CH48_2840 IPR032466 Metal-dependent hydrolase CH48_2841 IPR037171 NagB/RpiA transferase-like CH48_2841 IPR004547 Glucosamine-6-phosphate isomerase CH48_2841 IPR018321 Glucosamine-6-phosphate isomerase, conserved site CH48_2841 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase CH48_2842 IPR003352 Phosphotransferase system, EIIC CH48_2842 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site CH48_2842 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 CH48_2842 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component CH48_2842 IPR001996 Phosphotransferase system, IIB component, type 1 CH48_2842 IPR036878 Glucose permease domain IIB CH48_2842 IPR011055 Duplicated hybrid motif CH48_2842 IPR013013 Phosphotransferase system, EIIC component, type 1 CH48_2843 IPR022861 Glutamine-tRNA ligase, bacterial CH48_2843 IPR000924 Glutamyl/glutaminyl-tRNA synthetase CH48_2843 IPR004514 Glutamine-tRNA synthetase CH48_2843 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CH48_2843 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain CH48_2843 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain CH48_2843 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily CH48_2843 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal CH48_2843 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily CH48_2843 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH48_2844 IPR005318 Outer membrane porin, bacterial CH48_2844 IPR023614 Porin domain superfamily CH48_2845 IPR025727 YbfN-like lipoprotein CH48_2846 IPR014756 Immunoglobulin E-set CH48_2846 IPR012291 CBM2, carbohydrate-binding domain superfamily CH48_2846 IPR025705 Beta-hexosaminidase CH48_2846 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain CH48_2846 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily CH48_2846 IPR015883 Glycoside hydrolase family 20, catalytic domain CH48_2846 IPR017853 Glycoside hydrolase superfamily CH48_2846 IPR029018 Beta-hexosaminidase-like, domain 2 CH48_2846 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal CH48_2846 IPR013783 Immunoglobulin-like fold CH48_2846 IPR004867 Chitobiase C-terminal domain CH48_2847 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_2847 IPR002481 Ferric-uptake regulator CH48_2847 IPR036390 Winged helix DNA-binding domain superfamily CH48_2848 IPR001226 Flavodoxin, conserved site CH48_2848 IPR008254 Flavodoxin/nitric oxide synthase CH48_2848 IPR010086 Flavodoxin, long chain CH48_2848 IPR029039 Flavoprotein-like superfamily CH48_2849 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding CH48_2849 IPR004090 Chemotaxis methyl-accepting receptor CH48_2849 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CH48_2849 IPR003660 HAMP domain CH48_2849 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CH48_2849 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily CH48_285 IPR001207 Transposase, mutator type CH48_2850 IPR010985 Ribbon-helix-helix CH48_2850 IPR002145 Ribbon-helix-helix protein, CopG CH48_2852 IPR029058 Alpha/Beta hydrolase fold CH48_2852 IPR000073 Alpha/beta hydrolase fold-1 CH48_2853 IPR013321 Arc-type ribbon-helix-helix CH48_2853 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal CH48_2853 IPR010985 Ribbon-helix-helix CH48_2853 IPR005621 Negative modulator of initiation of replication SeqA CH48_2853 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain CH48_2853 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily CH48_2854 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I CH48_2854 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II CH48_2854 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III CH48_2854 IPR005852 Phosphoglucomutase, alpha-D-glucose specific CH48_2854 IPR016066 Alpha-D-phosphohexomutase, conserved site CH48_2854 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily CH48_2854 IPR005843 Alpha-D-phosphohexomutase, C-terminal CH48_2854 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III CH48_2856 IPR000620 EamA domain CH48_2857 IPR001867 OmpR/PhoB-type DNA-binding domain CH48_2857 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_2857 IPR039420 Transcriptional regulatory protein WalR-like CH48_2857 IPR011006 CheY-like superfamily CH48_2857 IPR001789 Signal transduction response regulator, receiver domain CH48_2858 IPR003018 GAF domain CH48_2858 IPR029016 GAF-like domain superfamily CH48_2858 IPR003594 Histidine kinase/HSP90-like ATPase CH48_2858 IPR005467 Histidine kinase domain CH48_2858 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH48_2858 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CH48_2858 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CH48_2858 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal CH48_2858 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CH48_2858 IPR025201 Sensor protein KdpD, transmembrane domain CH48_2858 IPR038318 KdpD, transmembrane domain superfamily CH48_2859 IPR003820 Potassium-transporting ATPase C chain CH48_286 IPR010279 Inner membrane protein YqjD/ElaB CH48_2860 IPR008250 P-type ATPase, A domain superfamily CH48_2860 IPR006391 P-type ATPase, B chain, subfamily IA CH48_2860 IPR001757 P-type ATPase CH48_2860 IPR023298 P-type ATPase, transmembrane domain superfamily CH48_2860 IPR018303 P-type ATPase, phosphorylation site CH48_2860 IPR023299 P-type ATPase, cytoplasmic domain N CH48_2860 IPR036412 HAD-like superfamily CH48_2861 IPR004623 Potassium-transporting ATPase A chain CH48_2862 IPR019663 Uncharacterised protein YbfA CH48_2864 IPR003996 RTX toxin-activating protein C, bacteria CH48_2865 IPR011509 RtxA toxin CH48_2865 IPR038383 CGT/MARTX, cysteine protease (CPD) domain superfamily CH48_2865 IPR029058 Alpha/Beta hydrolase fold CH48_2865 IPR032074 Actin cross-linking domain CH48_2865 IPR020974 CGT/MARTX, cysteine protease (CPD) domain CH48_2865 IPR020974 CGT/MARTX, cysteine protease (CPD) domain CH48_2865 IPR011049 Serralysin-like metalloprotease, C-terminal CH48_2865 IPR038383 CGT/MARTX, cysteine protease (CPD) domain superfamily CH48_2865 IPR022742 Serine aminopeptidase, S33 CH48_2865 IPR011509 RtxA toxin CH48_2865 IPR011049 Serralysin-like metalloprotease, C-terminal CH48_2865 IPR029058 Alpha/Beta hydrolase fold CH48_2865 IPR020972 Dermonecrotic/RTX toxin, membrane localization domain CH48_2865 IPR022742 Serine aminopeptidase, S33 CH48_2865 IPR020972 Dermonecrotic/RTX toxin, membrane localization domain CH48_2865 IPR032074 Actin cross-linking domain CH48_2866 IPR013560 Domain of unknown function DUF1722 CH48_2867 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain CH48_2867 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH48_2867 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal CH48_2867 IPR006050 DNA photolyase, N-terminal CH48_2867 IPR002081 Cryptochrome/DNA photolyase class 1 CH48_2867 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily CH48_2867 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily CH48_2868 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CH48_2868 IPR000396 Cyclic-AMP phosphodiesterase, class-II CH48_2868 IPR024225 Cyclic-AMP phosphodiesterase class-II, conserved site CH48_2869 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily CH48_2869 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CH48_2871 IPR003833 Carboxyltransferase domain, subdomain C and D CH48_2871 IPR029000 Cyclophilin-like domain superfamily CH48_2871 IPR010016 KipI family CH48_2872 IPR029000 Cyclophilin-like domain superfamily CH48_2872 IPR003778 Carboxyltransferase domain, subdomain A and B CH48_2873 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CH48_2873 IPR005501 LamB/YcsF/PxpA-like CH48_2876 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily CH48_2876 IPR000816 Peptidase C15, pyroglutamyl peptidase I CH48_2876 IPR033694 Pyroglutamyl peptidase I, Cys active site CH48_2876 IPR029762 Pyroglutamyl peptidase I, bacterial-type CH48_2876 IPR033693 Pyroglutamyl peptidase I, Glu active site CH48_2876 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like CH48_2877 IPR036969 Citrate synthase superfamily CH48_2877 IPR016142 Citrate synthase-like, large alpha subdomain CH48_2877 IPR016143 Citrate synthase-like, small alpha subdomain CH48_2877 IPR002020 Citrate synthase CH48_2877 IPR019810 Citrate synthase active site CH48_2877 IPR010953 Citrate synthase, type I CH48_2877 IPR024176 Citrate synthase, bacterial-type CH48_2878 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit CH48_2878 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit CH48_2878 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site CH48_2878 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit CH48_2879 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor CH48_2879 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit CH48_2879 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit CH48_2880 IPR036188 FAD/NAD(P)-binding domain superfamily CH48_2880 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site CH48_2880 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily CH48_2880 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain CH48_2880 IPR011281 Succinate dehydrogenase, flavoprotein subunit CH48_2880 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily CH48_2880 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal CH48_2880 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit CH48_2881 IPR012675 Beta-grasp domain superfamily CH48_2881 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CH48_2881 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein CH48_2881 IPR009051 Alpha-helical ferredoxin CH48_2881 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CH48_2881 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal CH48_2881 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CH48_2881 IPR036010 2Fe-2S ferredoxin-like superfamily CH48_2882 IPR001017 Dehydrogenase, E1 component CH48_2882 IPR005475 Transketolase-like, pyrimidine-binding domain CH48_2882 IPR029061 Thiamin diphosphate-binding fold CH48_2882 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily CH48_2882 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal CH48_2882 IPR011603 2-oxoglutarate dehydrogenase E1 component CH48_2882 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain CH48_2883 IPR006255 Dihydrolipoamide succinyltransferase CH48_2883 IPR011053 Single hybrid motif CH48_2883 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CH48_2883 IPR036625 E3-binding domain superfamily CH48_2883 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain CH48_2883 IPR004167 Peripheral subunit-binding domain CH48_2883 IPR000089 Biotin/lipoyl attachment CH48_2883 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily CH48_2884 IPR005811 ATP-citrate lyase/succinyl-CoA ligase CH48_2884 IPR016102 Succinyl-CoA synthetase-like CH48_2884 IPR013815 ATP-grasp fold, subdomain 1 CH48_2884 IPR005809 Succinate--CoA synthetase, beta subunit CH48_2884 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site CH48_2884 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type CH48_2884 IPR011761 ATP-grasp fold CH48_2885 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site CH48_2885 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site CH48_2885 IPR003781 CoA-binding CH48_2885 IPR005811 ATP-citrate lyase/succinyl-CoA ligase CH48_2885 IPR005810 Succinyl-CoA ligase, alpha subunit CH48_2885 IPR016102 Succinyl-CoA synthetase-like CH48_2885 IPR036291 NAD(P)-binding domain superfamily CH48_2887 IPR036907 5'-Nucleotidase, C-terminal domain superfamily CH48_2887 IPR008334 5'-Nucleotidase, C-terminal CH48_2887 IPR006146 5'-Nucleotidase, conserved site CH48_2887 IPR006179 5'-Nucleotidase/apyrase CH48_2887 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CH48_2887 IPR041827 CpdB, N-terminal metallophosphatase domain CH48_2887 IPR019931 LPXTG cell wall anchor domain CH48_2887 IPR029052 Metallo-dependent phosphatase-like CH48_2888 IPR002585 Cytochrome ubiquinol oxidase subunit 1 CH48_2889 IPR003317 Cytochrome ubiquinol oxidase subunit 2 CH48_289 IPR010371 Uncharacterised protein family UPF0303 CH48_289 IPR038084 GlcG-like domain superfamily CH48_289 IPR005624 Haem-degrading CH48_2890 IPR011724 Cyd operon protein YbgT CH48_2890 IPR012994 Membrane bound YbgT-like CH48_2891 IPR011846 Cyd operon protein YbgE CH48_2892 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site CH48_2892 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase CH48_2892 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family CH48_2892 IPR006683 Thioesterase domain CH48_2892 IPR029069 HotDog domain superfamily CH48_2893 IPR014163 Tol-Pal system, TolQ CH48_2893 IPR002898 MotA/TolQ/ExbB proton channel CH48_2894 IPR003400 Biopolymer transport protein ExbD/TolR CH48_2894 IPR014168 Tol-Pal system protein TolR CH48_2895 IPR014161 Tol-Pal system, TolA CH48_2895 IPR014161 Tol-Pal system, TolA CH48_2896 IPR007195 TolB, N-terminal CH48_2896 IPR014167 Tol-Pal system protein TolB CH48_2896 IPR011659 WD40-like Beta Propeller CH48_2896 IPR011042 Six-bladed beta-propeller, TolB-like CH48_2896 IPR036752 TolB, N-terminal domain superfamily CH48_2897 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal CH48_2897 IPR006664 Outer membrane protein, bacterial CH48_2897 IPR006665 OmpA-like domain CH48_2897 IPR006690 Outer membrane protein, OmpA-like, conserved site CH48_2897 IPR036737 OmpA-like domain superfamily CH48_2897 IPR039001 Peptidoglycan-associated lipoprotein CH48_2898 IPR014162 Cell division coordinator CpoB, C-terminal CH48_2898 IPR013026 Tetratricopeptide repeat-containing domain CH48_2898 IPR011990 Tetratricopeptide-like helical domain superfamily CH48_2898 IPR019734 Tetratricopeptide repeat CH48_2898 IPR032519 YbgF, trimerisation domain CH48_2898 IPR034706 Cell division coordinator CpoB CH48_290 IPR036259 MFS transporter superfamily CH48_290 IPR020846 Major facilitator superfamily domain CH48_290 IPR011701 Major facilitator superfamily CH48_2903 IPR023513 Quinolinate synthase A, type 1 CH48_2903 IPR003473 Quinolinate synthetase A CH48_2903 IPR036094 Quinolinate synthetase A superfamily CH48_2904 IPR006419 Nicotinamide mononucleotide transporter PnuC CH48_2905 IPR023500 Zinc transporter ZitB CH48_2905 IPR027469 Cation efflux transmembrane domain superfamily CH48_2905 IPR036837 Cation efflux protein, cytoplasmic domain superfamily CH48_2905 IPR002524 Cation efflux protein CH48_2906 IPR006218 DAHP synthetase I/KDSA CH48_2906 IPR006219 DHAP synthase, class 1 CH48_2906 IPR013785 Aldolase-type TIM barrel CH48_2907 IPR005952 Phosphoglycerate mutase 1 CH48_2907 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site CH48_2907 IPR029033 Histidine phosphatase superfamily CH48_2907 IPR013078 Histidine phosphatase superfamily, clade-1 CH48_2908 IPR040255 Non-specific endonuclease CH48_2908 IPR020821 Extracellular Endonuclease, subunit A CH48_2908 IPR001604 DNA/RNA non-specific endonuclease CH48_2908 IPR018524 DNA/RNA non-specific endonuclease, active site CH48_291 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CH48_291 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CH48_291 IPR036291 NAD(P)-binding domain superfamily CH48_2910 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily CH48_2910 IPR022398 Peptidase S8, subtilisin, His-active site CH48_2910 IPR023827 Peptidase S8, subtilisin, Asp-active site CH48_2910 IPR008357 Lantibiotic leader peptide-processing serine protease CH48_2910 IPR000209 Peptidase S8/S53 domain CH48_2910 IPR036852 Peptidase S8/S53 domain superfamily CH48_2910 IPR015500 Peptidase S8, subtilisin-related CH48_2910 IPR023828 Peptidase S8, subtilisin, Ser-active site CH48_2912 IPR018052 Aldose 1-epimerase, conserved site CH48_2912 IPR015443 Aldose 1-epimerase CH48_2912 IPR011013 Galactose mutarotase-like domain superfamily CH48_2912 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase CH48_2912 IPR014718 Glycoside hydrolase-type carbohydrate-binding CH48_2912 IPR013458 Aldose 1-epimerase, bacterial CH48_2913 IPR006204 GHMP kinase N-terminal domain CH48_2913 IPR006203 GHMP kinase, ATP-binding, conserved site CH48_2913 IPR000705 Galactokinase CH48_2913 IPR022963 Galactokinase, bacterial CH48_2913 IPR019741 Galactokinase, conserved site CH48_2913 IPR019539 Galactokinase galactose-binding domain CH48_2913 IPR006206 Mevalonate/galactokinase CH48_2913 IPR020568 Ribosomal protein S5 domain 2-type fold CH48_2913 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CH48_2913 IPR013750 GHMP kinase, C-terminal domain CH48_2913 IPR036554 GHMP kinase, C-terminal domain superfamily CH48_2914 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal CH48_2914 IPR001937 Galactose-1-phosphate uridyl transferase, class I CH48_2914 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site CH48_2914 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal CH48_2914 IPR036265 HIT-like superfamily CH48_2915 IPR005886 UDP-glucose 4-epimerase CH48_2915 IPR036291 NAD(P)-binding domain superfamily CH48_2915 IPR016040 NAD(P)-binding domain CH48_2917 IPR003593 AAA+ ATPase domain CH48_2917 IPR003439 ABC transporter-like CH48_2917 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_2918 IPR016462 Molybdate-dependent transcriptional regulator ModE CH48_2918 IPR008995 Molybdate/tungstate binding, C-terminal CH48_2918 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_2918 IPR000847 Transcription regulator HTH, LysR CH48_2918 IPR003725 Molybdenum-binding protein ModE, N-terminal CH48_2918 IPR004606 Molybdenum-pterin binding CH48_2918 IPR005116 Transport-associated OB, type 1 CH48_2918 IPR036390 Winged helix DNA-binding domain superfamily CH48_2919 IPR019702 Multidrug efflux pump accessory protein AcrZ CH48_2920 IPR005950 Molybdate ABC transporter, substrate-binding protein CH48_2922 IPR025166 Integrase, DNA-binding domain CH48_2922 IPR010998 Integrase/recombinase, N-terminal CH48_2922 IPR013762 Integrase-like, catalytic domain superfamily CH48_2922 IPR011010 DNA breaking-rejoining enzyme, catalytic core CH48_2922 IPR038488 Integrase, DNA-binding domain superfamily CH48_2922 IPR002104 Integrase, catalytic domain CH48_294 IPR002347 Short-chain dehydrogenase/reductase SDR CH48_294 IPR020904 Short-chain dehydrogenase/reductase, conserved site CH48_294 IPR036291 NAD(P)-binding domain superfamily CH48_295 IPR031322 Shikimate kinase/gluconokinase CH48_295 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_295 IPR006001 Carbohydrate kinase, thermoresistant glucokinase CH48_2958 IPR034690 Endolysin T4 type CH48_2958 IPR002196 Glycoside hydrolase, family 24 CH48_2958 IPR023346 Lysozyme-like domain superfamily CH48_2960 IPR011867 Molybdate ABC transporter, permease protein CH48_2960 IPR035906 MetI-like superfamily CH48_2960 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CH48_2961 IPR003439 ABC transporter-like CH48_2961 IPR017871 ABC transporter, conserved site CH48_2961 IPR005116 Transport-associated OB, type 1 CH48_2961 IPR015852 ABC transporter, molybdenum import, ModC CH48_2961 IPR008995 Molybdate/tungstate binding, C-terminal CH48_2961 IPR003593 AAA+ ATPase domain CH48_2961 IPR011868 Molybdate ABC transporter, ATP-binding protein CH48_2961 IPR004606 Molybdenum-pterin binding CH48_2961 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_2962 IPR000150 Cof family CH48_2962 IPR036412 HAD-like superfamily CH48_2962 IPR006379 HAD-superfamily hydrolase, subfamily IIB CH48_2962 IPR023214 HAD superfamily CH48_2963 IPR015943 WD40/YVTN repeat-like-containing domain superfamily CH48_2963 IPR011045 Nitrous oxide reductase, N-terminal CH48_2963 IPR019405 Lactonase, 7-bladed beta propeller CH48_2963 IPR022528 6-phosphogluconolactonase, YbhE-type CH48_2964 IPR005814 Aminotransferase class-III CH48_2964 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CH48_2964 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CH48_2964 IPR015424 Pyridoxal phosphate-dependent transferase CH48_2964 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA CH48_2965 IPR013785 Aldolase-type TIM barrel CH48_2965 IPR010722 Biotin and thiamin synthesis-associated domain CH48_2965 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB CH48_2965 IPR024177 Biotin synthase CH48_2965 IPR007197 Radical SAM CH48_2965 IPR006638 Elp3/MiaB/NifB CH48_2966 IPR004839 Aminotransferase, class I/classII CH48_2966 IPR015424 Pyridoxal phosphate-dependent transferase CH48_2966 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CH48_2966 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CH48_2966 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria CH48_2966 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type CH48_2966 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site CH48_2967 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH48_2967 IPR013216 Methyltransferase type 11 CH48_2967 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC CH48_2968 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_2968 IPR004472 Dethiobiotin synthase BioD CH48_2969 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_2969 IPR003439 ABC transporter-like CH48_2969 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type CH48_2969 IPR017871 ABC transporter, conserved site CH48_2969 IPR003593 AAA+ ATPase domain CH48_297 IPR009476 Protein of unknown function DUF1097 CH48_2970 IPR006935 Helicase/UvrB, N-terminal CH48_2970 IPR036876 UVR domain superfamily CH48_2970 IPR004807 UvrABC system, subunit B CH48_2970 IPR041471 UvrB, interaction domain CH48_2970 IPR001943 UVR domain CH48_2970 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_2970 IPR024759 UvrB, YAD/RRR-motif-containing domain CH48_2970 IPR001650 Helicase, C-terminal CH48_2970 IPR014001 Helicase superfamily 1/2, ATP-binding domain CH48_2971 IPR018668 DNA-binding protein VF530-like CH48_2971 IPR036361 SAP domain superfamily CH48_2972 IPR038136 Gluconeogenesis factor superfamily CH48_2972 IPR010119 Gluconeogenesis factor CH48_2972 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 CH48_2973 IPR013483 Molybdenum cofactor biosynthesis protein A CH48_2973 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site CH48_2973 IPR010505 Molybdenum cofactor synthesis C-terminal CH48_2973 IPR013785 Aldolase-type TIM barrel CH48_2973 IPR006638 Elp3/MiaB/NifB CH48_2973 IPR007197 Radical SAM CH48_2974 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain CH48_2974 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily CH48_2974 IPR023045 Molybdenum cofactor biosynthesis C CH48_2975 IPR003749 Sulfur carrier ThiS/MoaD-like CH48_2975 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CH48_2975 IPR012675 Beta-grasp domain superfamily CH48_2976 IPR003448 Molybdopterin biosynthesis MoaE CH48_2976 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily CH48_2977 IPR006214 Bax inhibitor 1-related CH48_2978 IPR000412 ABC-2 transporter CH48_2979 IPR000412 ABC-2 transporter CH48_2980 IPR003593 AAA+ ATPase domain CH48_2980 IPR003439 ABC transporter-like CH48_2980 IPR017871 ABC transporter, conserved site CH48_2980 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_2981 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CH48_2981 IPR022936 Uncharacterised protein family UPF0194, membrane protein YbhG CH48_2982 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CH48_2982 IPR015292 Transcription regulator YbiH, C-terminal CH48_2982 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CH48_2982 IPR001647 DNA-binding HTH domain, TetR-type CH48_2982 IPR009057 Homeobox-like domain superfamily CH48_2983 IPR014014 RNA helicase, DEAD-box type, Q motif CH48_2983 IPR028622 ATP-dependent RNA helicase RhlE CH48_2983 IPR001650 Helicase, C-terminal CH48_2983 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_2983 IPR014001 Helicase superfamily 1/2, ATP-binding domain CH48_2983 IPR011545 DEAD/DEAH box helicase domain CH48_2983 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CH48_2984 IPR035587 DUS-like, FMN-binding domain CH48_2984 IPR001269 tRNA-dihydrouridine synthase CH48_2984 IPR032886 tRNA-dihydrouridine(16) synthase CH48_2984 IPR042270 tRNA-dihydrouridine(16) synthase, C-terminal CH48_2984 IPR018517 tRNA-dihydrouridine synthase, conserved site CH48_2984 IPR013785 Aldolase-type TIM barrel CH48_2986 IPR006667 SLC41 divalent cation transporters, integral membrane domain CH48_2986 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily CH48_2986 IPR000644 CBS domain CH48_2986 IPR038076 MgtE, N-terminal domain superfamily CH48_2986 IPR006668 Magnesium transporter, MgtE intracellular domain CH48_2986 IPR038048 Magnesium transporter MgtE, transmembrane domain CH48_2986 IPR006669 Magnesium transporter MgtE CH48_2988 IPR012338 Beta-lactamase/transpeptidase-like CH48_2988 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A CH48_2988 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal CH48_2989 IPR006094 FAD linked oxidase, N-terminal CH48_2989 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal CH48_2989 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 CH48_2989 IPR016164 FAD-linked oxidase-like, C-terminal CH48_2989 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 CH48_2989 IPR012256 D-lactate dehydrogenase CH48_2989 IPR016169 FAD-binding, type PCMH, subdomain 2 CH48_2989 IPR016166 FAD-binding domain, PCMH-type CH48_2989 IPR036318 FAD-binding, type PCMH-like superfamily CH48_2989 IPR016167 FAD-binding, type PCMH, subdomain 1 CH48_299 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 CH48_299 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit CH48_2990 IPR008173 Adenylyl cyclase CyaB CH48_2990 IPR033469 CYTH-like domain superfamily CH48_2990 IPR023577 CYTH domain CH48_2991 IPR002711 HNH endonuclease CH48_2991 IPR003615 HNH nuclease CH48_2993 IPR007341 Transglycosylase-associated protein CH48_2994 IPR003439 ABC transporter-like CH48_2994 IPR003593 AAA+ ATPase domain CH48_2994 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_2994 IPR017871 ABC transporter, conserved site CH48_2994 IPR012693 ABC transporter, phosphonate import, PhnC CH48_2995 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein CH48_2995 IPR017797 Phosphonate ABC transporter, substrate-binding protein CH48_2996 IPR005769 ABC transporter, permease PhnE/PtxC CH48_2996 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CH48_2996 IPR035906 MetI-like superfamily CH48_2997 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CH48_2997 IPR005769 ABC transporter, permease PhnE/PtxC CH48_2997 IPR035906 MetI-like superfamily CH48_2998 IPR009921 Domain of unknown function DUF1456 CH48_3 IPR006162 Phosphopantetheine attachment site CH48_3 IPR036736 ACP-like superfamily CH48_3 IPR003231 Acyl carrier protein (ACP) CH48_3 IPR009081 Phosphopantetheine binding ACP domain CH48_300 IPR010227 NADH-quinone oxidoreductase, chain M/4 CH48_300 IPR003918 NADH:ubiquinone oxidoreductase CH48_300 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit CH48_3000 IPR001851 ABC transporter, permease CH48_3001 IPR001851 ABC transporter, permease CH48_3002 IPR003439 ABC transporter-like CH48_3002 IPR017871 ABC transporter, conserved site CH48_3002 IPR012693 ABC transporter, phosphonate import, PhnC CH48_3002 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_3002 IPR003593 AAA+ ATPase domain CH48_3003 IPR003593 AAA+ ATPase domain CH48_3003 IPR003439 ABC transporter-like CH48_3003 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein CH48_3003 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_3003 IPR017871 ABC transporter, conserved site CH48_3004 IPR001307 Thiosulphate sulfurtransferase, conserved site CH48_3004 IPR036873 Rhodanese-like domain superfamily CH48_3004 IPR001763 Rhodanese-like domain CH48_3005 IPR000683 Oxidoreductase, N-terminal CH48_3005 IPR023794 Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase CH48_3005 IPR004104 Oxidoreductase, C-terminal CH48_3005 IPR036291 NAD(P)-binding domain superfamily CH48_3007 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain CH48_3008 IPR035906 MetI-like superfamily CH48_3008 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CH48_3009 IPR003439 ABC transporter-like CH48_3009 IPR017871 ABC transporter, conserved site CH48_3009 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_3009 IPR003593 AAA+ ATPase domain CH48_301 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal CH48_301 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit CH48_301 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup CH48_301 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 CH48_3010 IPR035906 MetI-like superfamily CH48_3010 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CH48_3012 IPR002347 Short-chain dehydrogenase/reductase SDR CH48_3012 IPR020904 Short-chain dehydrogenase/reductase, conserved site CH48_3012 IPR036291 NAD(P)-binding domain superfamily CH48_3014 IPR005119 LysR, substrate-binding CH48_3014 IPR036390 Winged helix DNA-binding domain superfamily CH48_3014 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_3014 IPR000847 Transcription regulator HTH, LysR CH48_3015 IPR004779 Carboxylate/Amino Acid/Amine Transporter CH48_3015 IPR000620 EamA domain CH48_3017 IPR013793 Porin, Gram-negative type, conserved site CH48_3017 IPR001702 Porin, Gram-negative type CH48_3017 IPR001897 Porin, gammaproteobacterial CH48_3017 IPR033900 Porin domain, Gram-negative type CH48_3017 IPR023614 Porin domain superfamily CH48_3018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_3018 IPR006554 Helicase-like, DEXD box c2 type CH48_3018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CH48_3018 IPR006555 ATP-dependent helicase, C-terminal CH48_3018 IPR010614 DEAD2 CH48_3018 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type CH48_3018 IPR039000 ATP-dependent DNA helicase DinG CH48_3018 IPR001650 Helicase, C-terminal CH48_3019 IPR023743 Aquaporin Z CH48_3019 IPR034294 Aquaporin transporter CH48_3019 IPR023271 Aquaporin-like CH48_3019 IPR022357 Major intrinsic protein, conserved site CH48_3019 IPR000425 Major intrinsic protein CH48_302 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like CH48_302 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K CH48_3020 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily CH48_3020 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily CH48_3020 IPR017459 Glycosyl transferase family 3, N-terminal domain CH48_3024 IPR016909 Ribosomal RNA large subunit methyltransferase F CH48_3024 IPR010286 METTL16/RlmF family CH48_3024 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH48_3025 IPR004090 Chemotaxis methyl-accepting receptor CH48_3025 IPR013655 PAS fold-3 CH48_3025 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CH48_3025 IPR001610 PAC motif CH48_3025 IPR000014 PAS domain CH48_3025 IPR000700 PAS-associated, C-terminal CH48_3025 IPR035965 PAS domain superfamily CH48_3026 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_3026 IPR003593 AAA+ ATPase domain CH48_3026 IPR017871 ABC transporter, conserved site CH48_3026 IPR003439 ABC transporter-like CH48_3026 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type CH48_3027 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CH48_3027 IPR035906 MetI-like superfamily CH48_3027 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CH48_3028 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CH48_3028 IPR018313 Solute-binding protein family 3, conserved site CH48_3028 IPR001320 Ionotropic glutamate receptor CH48_3029 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria CH48_3029 IPR000962 Zinc finger, DksA/TraR C4-type CH48_3029 IPR020458 Zinc finger, DksA/TraR C4-type conserved site CH48_303 IPR042106 NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ CH48_303 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 CH48_3030 IPR023188 DNA-binding protein Dps, conserved site CH48_3030 IPR023067 DNA protection during starvation protein, gammaproteobacteria CH48_3030 IPR002177 DNA-binding protein Dps CH48_3030 IPR009078 Ferritin-like superfamily CH48_3030 IPR008331 Ferritin/DPS protein domain CH48_3030 IPR012347 Ferritin-like CH48_3031 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH48_3031 IPR023506 Trans-aconitate 2-methyltransferase CH48_3031 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal CH48_3031 IPR025714 Methyltransferase domain CH48_3034 IPR036378 FAS1 domain superfamily CH48_3034 IPR000782 FAS1 domain CH48_3036 IPR000620 EamA domain CH48_3037 IPR027385 Outer membrane protein beta-barrel domain CH48_3037 IPR000758 Virulence-related outer membrane protein CH48_3037 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CH48_304 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CH48_304 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CH48_304 IPR010226 NADH-quinone oxidoreductase, chain I CH48_3041 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_3041 IPR032781 ABC-transporter extension domain CH48_3041 IPR003593 AAA+ ATPase domain CH48_3041 IPR003439 ABC transporter-like CH48_3043 IPR035985 Ubiquitin-activating enzyme CH48_3043 IPR000594 THIF-type NAD/FAD binding fold CH48_3043 IPR012730 Molybdopterin synthase sulfurylase MoeB CH48_3044 IPR005110 MoeA, N-terminal and linker domain CH48_3044 IPR036425 MoaB/Mog-like domain superfamily CH48_3044 IPR036135 MoeA, N-terminal and linker domain superfamily CH48_3044 IPR036688 MoeA, C-terminal, domain IV superfamily CH48_3044 IPR005111 MoeA, C-terminal, domain IV CH48_3044 IPR038987 Molybdopterin biosynthesis protein MoeA-like CH48_3044 IPR008284 Molybdenum cofactor biosynthesis, conserved site CH48_3044 IPR001453 MoaB/Mog domain CH48_3047 IPR003593 AAA+ ATPase domain CH48_3047 IPR003838 ABC transporter permease protein domain CH48_3047 IPR003439 ABC transporter-like CH48_3047 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_3047 IPR025857 MacB-like periplasmic core domain CH48_3047 IPR017911 ABC transporter, macrolide export, ATP-binding domain CH48_3047 IPR017871 ABC transporter, conserved site CH48_305 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H CH48_305 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site CH48_3051 IPR014186 S-formylglutathione hydrolase CH48_3051 IPR029058 Alpha/Beta hydrolase fold CH48_3051 IPR000801 Putative esterase CH48_3052 IPR014183 Alcohol dehydrogenase class III CH48_3052 IPR013149 Alcohol dehydrogenase, C-terminal CH48_3052 IPR036291 NAD(P)-binding domain superfamily CH48_3052 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CH48_3052 IPR011032 GroES-like superfamily CH48_3052 IPR020843 Polyketide synthase, enoylreductase domain CH48_3052 IPR013154 Alcohol dehydrogenase, N-terminal CH48_3053 IPR000847 Transcription regulator HTH, LysR CH48_3053 IPR005119 LysR, substrate-binding CH48_3053 IPR036390 Winged helix DNA-binding domain superfamily CH48_3053 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_3054 IPR010645 Uncharacterised MFS-type transporter YbfB CH48_3054 IPR036259 MFS transporter superfamily CH48_3055 IPR001474 GTP cyclohydrolase I CH48_3055 IPR018234 GTP cyclohydrolase I, conserved site CH48_3055 IPR020602 GTP cyclohydrolase I domain CH48_3056 IPR007349 Domain of unknown function DUF418 CH48_3057 IPR000843 LacI-type HTH domain CH48_3057 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CH48_3057 IPR028082 Periplasmic binding protein-like I CH48_3058 IPR025997 Periplasmic binding protein CH48_3058 IPR028082 Periplasmic binding protein-like I CH48_3059 IPR003593 AAA+ ATPase domain CH48_3059 IPR017871 ABC transporter, conserved site CH48_3059 IPR003439 ABC transporter-like CH48_3059 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_3059 IPR015862 ABC transporter, galactose import, MglA CH48_306 IPR036010 2Fe-2S ferredoxin-like superfamily CH48_306 IPR006656 Molybdopterin oxidoreductase CH48_306 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CH48_306 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site CH48_306 IPR010228 NADH:ubiquinone oxidoreductase, subunit G CH48_306 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding CH48_306 IPR006657 Molybdopterin dinucleotide-binding domain CH48_306 IPR009010 Aspartate decarboxylase-like domain superfamily CH48_306 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CH48_3060 IPR030158 Galactoside transport system permease protein MglC CH48_3060 IPR001851 ABC transporter, permease CH48_3061 IPR003018 GAF domain CH48_3061 IPR003593 AAA+ ATPase domain CH48_3061 IPR009057 Homeobox-like domain superfamily CH48_3061 IPR002197 DNA binding HTH domain, Fis-type CH48_3061 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_3061 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CH48_3061 IPR002078 RNA polymerase sigma factor 54 interaction domain CH48_3061 IPR025944 Sigma-54 interaction domain, conserved site CH48_3061 IPR029016 GAF-like domain superfamily CH48_3062 IPR006656 Molybdopterin oxidoreductase CH48_3062 IPR006657 Molybdopterin dinucleotide-binding domain CH48_3062 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CH48_3062 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site CH48_3062 IPR006478 Formate dehydrogenase, alpha subunit CH48_3062 IPR041924 Formate dehydrogenase H, N-terminal CH48_3062 IPR041925 Formate dehydrogenase H, molybdopterin-binding domain CH48_3062 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site CH48_3062 IPR009010 Aspartate decarboxylase-like domain superfamily CH48_3063 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CH48_3063 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CH48_3064 IPR023430 Peptidase HybD-like domain superfamily CH48_3064 IPR000671 Peptidase A31 family CH48_3064 IPR004420 Peptidase A31, hydrogenase maturation protease HycI CH48_3065 IPR010005 Formate hydrogenlyase maturation HycH CH48_3066 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit CH48_3066 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit CH48_3067 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CH48_3067 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CH48_3067 IPR010226 NADH-quinone oxidoreductase, chain I CH48_3068 IPR001135 NADH-quinone oxidoreductase, subunit D CH48_3068 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily CH48_3068 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit CH48_3068 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily CH48_3068 IPR001501 Nickel-dependent hydrogenase, large subunit CH48_3068 IPR029014 [NiFe]-hydrogenase, large subunit CH48_3068 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site CH48_3069 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal CH48_3069 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit CH48_307 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain CH48_307 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily CH48_307 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain CH48_307 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily CH48_307 IPR019554 Soluble ligand binding domain CH48_307 IPR011537 NADH ubiquinone oxidoreductase, F subunit CH48_307 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site CH48_3070 IPR038730 Hydrogenase-4 component E-like CH48_3070 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like CH48_3071 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal CH48_3071 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit CH48_3072 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site CH48_3072 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H CH48_3073 IPR003918 NADH:ubiquinone oxidoreductase CH48_3073 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit CH48_3074 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CH48_3074 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CH48_3075 IPR000688 Hydrogenase maturation factor HypA/HybF CH48_3075 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site CH48_3076 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CH48_3076 IPR019812 Hydrogenase assembly chaperone, conserved site CH48_3076 IPR037254 HupF/HypC superfamily CH48_3077 IPR003848 Domain of unknown function DUF218 CH48_3077 IPR023604 Uncharacterised protein family SanA CH48_3078 IPR001891 Malic oxidoreductase CH48_3078 IPR015884 Malic enzyme, conserved site CH48_3078 IPR012301 Malic enzyme, N-terminal domain CH48_3078 IPR037062 Malic enzyme, N-terminal domain superfamily CH48_3078 IPR023667 NAD-dependent malic enzyme, proteobacteria CH48_3078 IPR036291 NAD(P)-binding domain superfamily CH48_3078 IPR012302 Malic enzyme, NAD-binding CH48_308 IPR041921 NADH-quinone oxidoreductase subunit E, N-terminal CH48_308 IPR042128 NuoE domain CH48_308 IPR002023 NADH-quinone oxidoreductase subunit E-like CH48_308 IPR036249 Thioredoxin-like superfamily CH48_3080 IPR020797 Cytidine deaminase, bacteria CH48_3080 IPR016192 APOBEC/CMP deaminase, zinc-binding CH48_3080 IPR016193 Cytidine deaminase-like CH48_3080 IPR006263 Cytidine deaminase, homodimeric CH48_3080 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain CH48_3080 IPR002125 Cytidine and deoxycytidylate deaminase domain CH48_3081 IPR005261 Conserved hypothetical protein CHP00659 CH48_3081 IPR007300 CidB/LrgB family CH48_3082 IPR005538 LrgA/CidA family CH48_3082 IPR022957 Uncharacterised protein family UPF0299 CH48_3083 IPR011701 Major facilitator superfamily CH48_3083 IPR036259 MFS transporter superfamily CH48_3083 IPR020846 Major facilitator superfamily domain CH48_3087 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CH48_3087 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain CH48_3087 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CH48_3087 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal CH48_3087 IPR023458 Methionine-tRNA ligase, type 1 CH48_3087 IPR029038 Methionyl-tRNA synthetase, Zn-domain CH48_3087 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH48_3087 IPR014758 Methionyl-tRNA synthetase CH48_3087 IPR012340 Nucleic acid-binding, OB-fold CH48_3087 IPR015413 Methionyl/Leucyl tRNA synthetase CH48_3087 IPR033911 Methioninyl-tRNA synthetase core domain CH48_3087 IPR002547 tRNA-binding domain CH48_3088 IPR034904 Fe-S cluster assembly domain superfamily CH48_3088 IPR000808 Mrp, conserved site CH48_3088 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_3088 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 CH48_3088 IPR019591 Mrp/NBP35 ATP-binding protein CH48_3089 IPR006083 Phosphoribulokinase/uridine kinase CH48_3089 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_3089 IPR000764 Uridine kinase-like CH48_3089 IPR026008 Uridine kinase CH48_309 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily CH48_309 IPR001135 NADH-quinone oxidoreductase, subunit D CH48_309 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily CH48_309 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit CH48_309 IPR029014 [NiFe]-hydrogenase, large subunit CH48_309 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H CH48_309 IPR023062 NADH dehydrogenase, subunit CD CH48_309 IPR010218 NADH dehydrogenase, subunit C CH48_309 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site CH48_3090 IPR033704 dUTPase, trimeric CH48_3090 IPR029054 dUTPase-like CH48_3090 IPR011962 dCTP deaminase CH48_3090 IPR036157 dUTPase-like superfamily CH48_3091 IPR007844 AsmA CH48_3092 IPR004669 C4-dicarboxylate anaerobic carrier CH48_3092 IPR018385 C4-dicarboxylate anaerobic carrier-like CH48_3093 IPR036318 FAD-binding, type PCMH-like superfamily CH48_3093 IPR016169 FAD-binding, type PCMH, subdomain 2 CH48_3093 IPR005496 Integral membrane protein TerC CH48_3093 IPR005170 Transporter-associated domain CH48_3093 IPR000644 CBS domain CH48_3094 IPR029044 Nucleotide-diphospho-sugar transferases CH48_3094 IPR005835 Nucleotidyl transferase domain CH48_3094 IPR011051 RmlC-like cupin domain superfamily CH48_3094 IPR014710 RmlC-like jelly roll fold CH48_3094 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal CH48_3094 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase CH48_3095 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I CH48_3095 IPR005841 Alpha-D-phosphohexomutase superfamily CH48_3095 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III CH48_3095 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II CH48_3095 IPR016066 Alpha-D-phosphohexomutase, conserved site CH48_3095 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily CH48_3095 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III CH48_3095 IPR005843 Alpha-D-phosphohexomutase, C-terminal CH48_3096 IPR005835 Nucleotidyl transferase domain CH48_3096 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type CH48_3096 IPR029044 Nucleotide-diphospho-sugar transferases CH48_3097 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type CH48_3097 IPR029044 Nucleotide-diphospho-sugar transferases CH48_3097 IPR005835 Nucleotidyl transferase domain CH48_3098 IPR006368 GDP-mannose 4,6-dehydratase CH48_3098 IPR016040 NAD(P)-binding domain CH48_3098 IPR036291 NAD(P)-binding domain superfamily CH48_3099 IPR015424 Pyridoxal phosphate-dependent transferase CH48_3099 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CH48_3099 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CH48_3099 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CH48_31 IPR032808 DoxX family CH48_310 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit CH48_310 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit CH48_3101 IPR003593 AAA+ ATPase domain CH48_3101 IPR003439 ABC transporter-like CH48_3101 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_3104 IPR011034 Formyl transferase-like, C-terminal domain superfamily CH48_3104 IPR005793 Formyl transferase, C-terminal CH48_3104 IPR002376 Formyl transferase, N-terminal CH48_3104 IPR005794 Methionyl-tRNA formyltransferase CH48_3104 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain CH48_3104 IPR001555 Phosphoribosylglycinamide formyltransferase, active site CH48_3104 IPR036477 Formyl transferase, N-terminal domain superfamily CH48_3105 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CH48_3105 IPR001296 Glycosyl transferase, family 1 CH48_3106 IPR036291 NAD(P)-binding domain superfamily CH48_3106 IPR006183 6-phosphogluconate dehydrogenase CH48_3106 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating CH48_3106 IPR006184 6-phosphogluconate-binding site CH48_3106 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding CH48_3106 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CH48_3106 IPR006114 6-phosphogluconate dehydrogenase, C-terminal CH48_3106 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CH48_3107 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily CH48_3107 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain CH48_3107 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like CH48_3107 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase CH48_3107 IPR023019 Histidine biosynthesis bifunctional protein HisIE CH48_3108 IPR013785 Aldolase-type TIM barrel CH48_3108 IPR006062 Histidine biosynthesis CH48_3108 IPR004651 Histidine biosynthesis, HisF CH48_3108 IPR011060 Ribulose-phosphate binding barrel CH48_3109 IPR013785 Aldolase-type TIM barrel CH48_3109 IPR006062 Histidine biosynthesis CH48_3109 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase CH48_3109 IPR011060 Ribulose-phosphate binding barrel CH48_3109 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA CH48_311 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily CH48_311 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid CH48_311 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 CH48_3110 IPR017926 Glutamine amidotransferase CH48_3110 IPR029062 Class I glutamine amidotransferase-like CH48_3110 IPR010139 Imidazole glycerol phosphate synthase, subunit H CH48_3111 IPR036412 HAD-like superfamily CH48_3111 IPR006543 Histidinol-phosphate phosphatase CH48_3111 IPR023214 HAD superfamily CH48_3111 IPR020566 Histidine biosynthesis bifunctional protein HisB CH48_3111 IPR005954 Histidinol-phosphatase CH48_3111 IPR006549 HAD-superfamily hydrolase,subfamily IIIA CH48_3111 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily CH48_3111 IPR000807 Imidazoleglycerol-phosphate dehydratase CH48_3111 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site CH48_3111 IPR020568 Ribosomal protein S5 domain 2-type fold CH48_3112 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CH48_3112 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CH48_3112 IPR015424 Pyridoxal phosphate-dependent transferase CH48_3112 IPR005861 Histidinol-phosphate aminotransferase family CH48_3112 IPR004839 Aminotransferase, class I/classII CH48_3112 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site CH48_3113 IPR001692 Histidinol dehydrogenase, conserved site CH48_3113 IPR022695 Histidinol dehydrogenase, monofunctional CH48_3113 IPR012131 Histidinol dehydrogenase CH48_3113 IPR016161 Aldehyde/histidinol dehydrogenase CH48_3114 IPR013115 Histidine biosynthesis HisG, C-terminal CH48_3114 IPR020621 ATP phosphoribosyltransferase HisG, long form CH48_3114 IPR013820 ATP phosphoribosyltransferase, catalytic domain CH48_3114 IPR018198 ATP phosphoribosyltransferase, conserved site CH48_3114 IPR001348 ATP phosphoribosyltransferase HisG CH48_3114 IPR011322 Nitrogen regulatory PII-like, alpha/beta CH48_3114 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CH48_3115 IPR036291 NAD(P)-binding domain superfamily CH48_3115 IPR001509 NAD-dependent epimerase/dehydratase CH48_3117 IPR001851 ABC transporter, permease CH48_3118 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_3118 IPR015861 ABC transporter, ribose import, RbsA CH48_3118 IPR003593 AAA+ ATPase domain CH48_3118 IPR017871 ABC transporter, conserved site CH48_3118 IPR003439 ABC transporter-like CH48_312 IPR036390 Winged helix DNA-binding domain superfamily CH48_312 IPR005119 LysR, substrate-binding CH48_312 IPR000847 Transcription regulator HTH, LysR CH48_312 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_3122 IPR002293 Amino acid/polyamine transporter I CH48_3123 IPR034748 Exonuclease I, C-terminal alpha-helical domain CH48_3123 IPR034747 Exonuclease I, SH3-like domain CH48_3123 IPR013620 Exodeoxyribonuclease I, C-terminal CH48_3123 IPR023607 Exodeoxyribonuclease I CH48_3123 IPR036397 Ribonuclease H superfamily CH48_3123 IPR012337 Ribonuclease H-like superfamily CH48_3123 IPR013520 Exonuclease, RNase T/DNA polymerase III CH48_3123 IPR038649 Exonuclease I, SH3-like domain superfamily CH48_3124 IPR013120 Male sterility, NAD-binding CH48_3124 IPR042099 AMP-dependent synthetase-like superfamily CH48_3124 IPR000873 AMP-dependent synthetase/ligase CH48_3124 IPR020845 AMP-binding, conserved site CH48_3124 IPR010080 Thioester reductase-like domain CH48_3124 IPR036291 NAD(P)-binding domain superfamily CH48_3124 IPR036736 ACP-like superfamily CH48_3124 IPR009081 Phosphopantetheine binding ACP domain CH48_3124 IPR020806 Polyketide synthase, phosphopantetheine-binding domain CH48_3125 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein CH48_3126 IPR007458 Protein of unknown function DUF496 CH48_3127 IPR001851 ABC transporter, permease CH48_3128 IPR001851 ABC transporter, permease CH48_313 IPR004839 Aminotransferase, class I/classII CH48_313 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CH48_313 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CH48_313 IPR015424 Pyridoxal phosphate-dependent transferase CH48_3130 IPR025997 Periplasmic binding protein CH48_3130 IPR028082 Periplasmic binding protein-like I CH48_3131 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CH48_3131 IPR012363 Propanediol utilisation/coumermycin biosynthesis, PduX-related CH48_3131 IPR006204 GHMP kinase N-terminal domain CH48_3131 IPR020568 Ribosomal protein S5 domain 2-type fold CH48_3132 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CH48_3132 IPR015424 Pyridoxal phosphate-dependent transferase CH48_3132 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site CH48_3132 IPR005860 L-threonine-O-3-phosphate decarboxylase CH48_3132 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CH48_3132 IPR004839 Aminotransferase, class I/classII CH48_3133 IPR035996 Tetrapyrrole methylase superfamily CH48_3133 IPR014777 Tetrapyrrole methylase, subdomain 1 CH48_3133 IPR014776 Tetrapyrrole methylase, subdomain 2 CH48_3133 IPR006366 Uroporphyrin-III C-methyltransferase CH48_3133 IPR000878 Tetrapyrrole methylase CH48_3133 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site CH48_3133 IPR037115 Sirohaem synthase, dimerisation domain superfamily CH48_3133 IPR006367 Sirohaem synthase, N-terminal CH48_3133 IPR019478 Sirohaem synthase, dimerisation domain CH48_3133 IPR012409 Sirohaem synthase CH48_3133 IPR028281 Siroheme synthase, central domain CH48_3133 IPR036291 NAD(P)-binding domain superfamily CH48_3134 IPR024896 Propionate kinase PduW CH48_3134 IPR004372 Acetate/propionate kinase CH48_3134 IPR000890 Aliphatic acid kinase, short-chain CH48_3134 IPR023865 Aliphatic acid kinase, short-chain, conserved site CH48_3135 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV CH48_3135 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_3136 IPR000249 Microcompartment protein, bacteria CH48_3136 IPR037233 CcmK-like superfamily CH48_3136 IPR009307 Ethanolamine utilisation EutS CH48_3138 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CH48_3138 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain CH48_3138 IPR019554 Soluble ligand binding domain CH48_3138 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC CH48_3138 IPR009051 Alpha-helical ferredoxin CH48_3138 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CH48_3138 IPR026902 RnfC Barrel sandwich hybrid domain CH48_3138 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily CH48_3139 IPR018211 Alcohol dehydrogenase, iron-type, conserved site CH48_3139 IPR039697 Iron-type alcohol dehydrogenase-like CH48_3139 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA CH48_314 IPR022971 5'-deoxynucleotidase YfbR CH48_314 IPR039356 Metal-dependent nucleoside 5'-monophosphatase CH48_314 IPR003607 HD/PDEase domain CH48_3140 IPR015590 Aldehyde dehydrogenase domain CH48_3140 IPR016162 Aldehyde dehydrogenase, N-terminal CH48_3140 IPR016163 Aldehyde dehydrogenase, C-terminal CH48_3140 IPR016161 Aldehyde/histidinol dehydrogenase CH48_3140 IPR012408 Acetaldehyde/propionaldehyde dehydrogenase, EutE/PduP-related CH48_3141 IPR036451 Cobalamin adenosyltransferase-like superfamily CH48_3141 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type CH48_3141 IPR016030 Cobalamin adenosyltransferase-like CH48_3142 IPR036677 EutN/Ccml superfamily CH48_3142 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml CH48_3144 IPR008300 Phosphate propanoyltransferase CH48_3146 IPR000249 Microcompartment protein, bacteria CH48_3146 IPR037233 CcmK-like superfamily CH48_3146 IPR020808 Bacterial microcompartments protein, conserved site CH48_3148 IPR028975 Diol dehydratase-reactivating factor, alpha subunit, swiveling domain superfamily CH48_3148 IPR009191 Diol dehydratase-reactivating factor alpha subunit CH48_3148 IPR030994 Diol dehydratase reactivase ATPase-like domain CH48_3148 IPR040916 DD-reactivating factor swiveling domain CH48_315 IPR006037 Regulator of K+ conductance, C-terminal CH48_315 IPR031312 Sodium/sulphate symporter, conserved site CH48_315 IPR004680 Citrate transporter-like domain CH48_315 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily CH48_3150 IPR036091 Propanediol/glycerol dehydratase, small subunit superfamily CH48_3150 IPR003207 Propanediol/glycerol dehydratase, small subunit CH48_3151 IPR025541 Propanediol/glycerol dehydratase, medium subunit CH48_3151 IPR010254 B12-dependent dehydratases, beta subunit CH48_3151 IPR003208 Diol/glycerol dehydratase/dehydratase reactivating factor CH48_3152 IPR003206 Diol/glycerol dehydratase, large subunit CH48_3152 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic CH48_3152 IPR036999 Diol/glycerol dehydratase, large subunit superfamily CH48_3153 IPR030984 Microcompartment protein PduB CH48_3153 IPR037233 CcmK-like superfamily CH48_3153 IPR009193 Polyhedral organelle shell protein, EutL/PduB type CH48_3153 IPR000249 Microcompartment protein, bacteria CH48_3154 IPR037233 CcmK-like superfamily CH48_3154 IPR020808 Bacterial microcompartments protein, conserved site CH48_3154 IPR000249 Microcompartment protein, bacteria CH48_3155 IPR022357 Major intrinsic protein, conserved site CH48_3155 IPR000425 Major intrinsic protein CH48_3155 IPR023271 Aquaporin-like CH48_3156 IPR020449 Transcription regulator HTH, AraC- type CH48_3156 IPR018062 HTH domain AraC-type, conserved site CH48_3156 IPR018771 PocR domain CH48_3156 IPR009057 Homeobox-like domain superfamily CH48_3156 IPR018060 DNA binding HTH domain, AraC-type CH48_3157 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CH48_3157 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_3157 IPR011698 CobB/CobQ-like glutamine amidotransferase CH48_3157 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA CH48_3157 IPR029062 Class I glutamine amidotransferase-like CH48_3157 IPR017929 CobB/CobQ glutamine amidotransferase CH48_3158 IPR004485 Cobalamin biosynthesis CobD/CbiB CH48_3159 IPR003722 Cobalamin biosynthesis precorrin-8X methylmutase CobH/CbiC CH48_3159 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily CH48_3160 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD CH48_3160 IPR036074 CbiD superfamily CH48_3161 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase CH48_3161 IPR014777 Tetrapyrrole methylase, subdomain 1 CH48_3161 IPR035996 Tetrapyrrole methylase superfamily CH48_3161 IPR000878 Tetrapyrrole methylase CH48_3162 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH48_3162 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit CH48_3162 IPR007848 Methyltransferase small domain CH48_3163 IPR035996 Tetrapyrrole methylase superfamily CH48_3163 IPR014777 Tetrapyrrole methylase, subdomain 1 CH48_3163 IPR014776 Tetrapyrrole methylase, subdomain 2 CH48_3163 IPR000878 Tetrapyrrole methylase CH48_3163 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase CH48_3163 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site CH48_3164 IPR021744 Cobalamin synthesis G, N-terminal CH48_3164 IPR036518 CobE/GbiG C-terminal domain superfamily CH48_3164 IPR002750 CobE/GbiG C-terminal domain CH48_3164 IPR038029 GbiG N-terminal domain superfamily CH48_3164 IPR021745 Cobalamin biosynthesis central region CH48_3165 IPR035996 Tetrapyrrole methylase superfamily CH48_3165 IPR014777 Tetrapyrrole methylase, subdomain 1 CH48_3165 IPR014776 Tetrapyrrole methylase, subdomain 2 CH48_3165 IPR006363 Precorrin-3B C17-methyltransferase domain CH48_3165 IPR000878 Tetrapyrrole methylase CH48_3166 IPR003723 Precorrin-6x reductase CH48_3167 IPR010388 Anaerobic cobalt chelatase CH48_3168 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site CH48_3168 IPR014777 Tetrapyrrole methylase, subdomain 1 CH48_3168 IPR000878 Tetrapyrrole methylase CH48_3168 IPR035996 Tetrapyrrole methylase superfamily CH48_3168 IPR006364 Precorrin-2 C(20)-methyltransferase domain CH48_3168 IPR012382 Precorrin-2 C(20)-methyltransferase CH48_3168 IPR014776 Tetrapyrrole methylase, subdomain 2 CH48_3169 IPR018024 Cobalamin (vitamin B12) transport protein CbiM CH48_3169 IPR002751 Metal transport protein CbiM/NikMN CH48_317 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CH48_317 IPR023214 HAD superfamily CH48_317 IPR036412 HAD-like superfamily CH48_317 IPR006439 HAD hydrolase, subfamily IA CH48_317 IPR041492 Haloacid dehalogenase-like hydrolase CH48_3170 IPR003705 Cobalt transport protein CbiN CH48_3171 IPR003339 ABC/ECF transporter, transmembrane component CH48_3171 IPR012809 Cobalt ECF transporter T component CbiQ CH48_3172 IPR003593 AAA+ ATPase domain CH48_3172 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_3172 IPR005876 Cobalt transport protein ATP-binding subunit CH48_3172 IPR003439 ABC transporter-like CH48_3172 IPR017871 ABC transporter, conserved site CH48_3172 IPR015856 ABC transporter, CbiO/EcfA subunit CH48_3173 IPR029062 Class I glutamine amidotransferase-like CH48_3173 IPR017929 CobB/CobQ glutamine amidotransferase CH48_3173 IPR033949 Cobyric acid synthase, glutamine amidotransferase type 1 CH48_3173 IPR004459 Cobyric acid synthase CobQ CH48_3173 IPR011698 CobB/CobQ-like glutamine amidotransferase CH48_3173 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_3174 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_3174 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase CH48_3175 IPR003805 Adenosylcobinamide-GDP ribazoletransferase CH48_3176 IPR017578 Alpha-ribazole phosphatase, CobC CH48_3176 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site CH48_3176 IPR029033 Histidine phosphatase superfamily CH48_3176 IPR013078 Histidine phosphatase superfamily, clade-1 CH48_3177 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic CH48_3177 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily CH48_3177 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal CH48_3177 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like CH48_3178 IPR036259 MFS transporter superfamily CH48_3178 IPR020846 Major facilitator superfamily domain CH48_3178 IPR004740 Nucleoside:H+ symporter CH48_318 IPR023145 YfbU, helix-hairpin domain superfamily CH48_318 IPR023146 YfbU, alpha-helical bundle domain superfamily CH48_318 IPR005587 Uncharacterised protein family UPF0304, YfbU CH48_3188 IPR001270 ClpA/B family CH48_3188 IPR017729 Type VI secretion system, ATPase ClpV1 CH48_3188 IPR028299 ClpA/B, conserved site 2 CH48_3188 IPR041546 ClpA/ClpB, AAA lid domain CH48_3188 IPR036628 Clp, N-terminal domain superfamily CH48_3188 IPR019489 Clp ATPase, C-terminal CH48_3188 IPR004176 Clp, N-terminal CH48_3188 IPR018368 ClpA/B, conserved site 1 CH48_3188 IPR003593 AAA+ ATPase domain CH48_3188 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_3188 IPR003959 ATPase, AAA-type, core CH48_3189 IPR008966 Adhesion domain superfamily CH48_3189 IPR036937 Fimbrial-type adhesion domain superfamily CH48_3189 IPR000259 Fimbrial-type adhesion domain CH48_319 IPR007334 Uncharacterised protein family UPF0208 CH48_3190 IPR036316 Pili assembly chaperone, C-terminal domain superfamily CH48_3190 IPR016147 Pili assembly chaperone, N-terminal CH48_3190 IPR018046 Pili assembly chaperone, conserved site CH48_3190 IPR001829 Pili assembly chaperone, bacterial CH48_3190 IPR013783 Immunoglobulin-like fold CH48_3190 IPR008962 PapD-like superfamily CH48_3190 IPR016148 Pili assembly chaperone, C-terminal CH48_3191 IPR037224 PapC, N-terminal domain superfamily CH48_3191 IPR042186 Outer membrane usher protein FimD, plug domain CH48_3191 IPR025949 PapC-like, C-terminal domain CH48_3191 IPR025885 PapC, N-terminal domain CH48_3191 IPR000015 Outer membrane usher protein CH48_3191 IPR018030 Fimbrial membrane usher, conserved site CH48_320 IPR023865 Aliphatic acid kinase, short-chain, conserved site CH48_320 IPR004372 Acetate/propionate kinase CH48_320 IPR000890 Aliphatic acid kinase, short-chain CH48_3200 IPR037026 Vgr protein, OB-fold domain superfamily CH48_3200 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein CH48_3200 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset CH48_3200 IPR006531 Gp5 N-terminal CH48_3205 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH48_3205 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail CH48_3205 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body CH48_3205 IPR018223 Argininosuccinate synthase, conserved site CH48_3205 IPR001518 Argininosuccinate synthase CH48_3205 IPR023437 Argininosuccinate synthase, type 2 subfamily CH48_3206 IPR002528 Multi antimicrobial extrusion protein CH48_3208 IPR022998 Thiamine phosphate synthase/TenI CH48_3208 IPR034291 Thiamine phosphate synthase CH48_3208 IPR036206 Thiamin phosphate synthase superfamily CH48_3208 IPR013785 Aldolase-type TIM barrel CH48_3209 IPR000150 Cof family CH48_3209 IPR036412 HAD-like superfamily CH48_3209 IPR006379 HAD-superfamily hydrolase, subfamily IIB CH48_3209 IPR023214 HAD superfamily CH48_321 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_321 IPR042113 Phosphate acetyltransferase, domain 1 CH48_321 IPR042112 Phosphate acetyltransferase, domain 2 CH48_321 IPR002505 Phosphate acetyl/butaryl transferase CH48_321 IPR004614 Phosphate acetyltransferase CH48_321 IPR010766 DRTGG CH48_321 IPR016475 Phosphate acetyltransferase, bacteria CH48_321 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily CH48_3210 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_3210 IPR014036 DeoR C-terminal sensor domain CH48_3210 IPR001034 DeoR-type HTH domain CH48_3210 IPR036390 Winged helix DNA-binding domain superfamily CH48_3210 IPR037171 NagB/RpiA transferase-like CH48_3210 IPR018356 Transcription regulator, HTH DeoR-type, conserved site CH48_3211 IPR023650 Beta-lactamase, class-A active site CH48_3211 IPR012338 Beta-lactamase/transpeptidase-like CH48_3211 IPR001466 Beta-lactamase-related CH48_3212 IPR024181 Chemotaxis response regulator CheV CH48_3212 IPR001789 Signal transduction response regulator, receiver domain CH48_3212 IPR002545 CheW-like domain CH48_3212 IPR036061 CheW-like domain superfamily CH48_3212 IPR011006 CheY-like superfamily CH48_3214 IPR036291 NAD(P)-binding domain superfamily CH48_3214 IPR002347 Short-chain dehydrogenase/reductase SDR CH48_3216 IPR003710 Ketopantoate reductase ApbA/PanE CH48_3216 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CH48_3216 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CH48_3216 IPR036291 NAD(P)-binding domain superfamily CH48_3216 IPR013332 Ketopantoate reductase, N-terminal domain CH48_3216 IPR013752 Ketopantoate reductase, C-terminal domain CH48_3218 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_3218 IPR008995 Molybdate/tungstate binding, C-terminal CH48_3218 IPR015853 ABC transporter, ferric cation import, FbpC CH48_3218 IPR017871 ABC transporter, conserved site CH48_3218 IPR003439 ABC transporter-like CH48_3218 IPR013611 Transport-associated OB, type 2 CH48_3218 IPR003593 AAA+ ATPase domain CH48_3219 IPR035906 MetI-like superfamily CH48_3219 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CH48_322 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CH48_322 IPR001761 Periplasmic binding protein/LacI sugar binding domain CH48_322 IPR000843 LacI-type HTH domain CH48_322 IPR028082 Periplasmic binding protein-like I CH48_3220 IPR026045 Ferric binding protein CH48_3221 IPR000849 Sugar phosphate transporter CH48_3221 IPR021159 Glycerate/sugar phosphate transporter, conserved site CH48_3221 IPR036259 MFS transporter superfamily CH48_3221 IPR020846 Major facilitator superfamily domain CH48_3221 IPR011701 Major facilitator superfamily CH48_3222 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain CH48_3222 IPR005467 Histidine kinase domain CH48_3222 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH48_3222 IPR003594 Histidine kinase/HSP90-like ATPase CH48_3222 IPR007895 MASE1 CH48_3223 IPR001789 Signal transduction response regulator, receiver domain CH48_3223 IPR016032 Signal transduction response regulator, C-terminal effector CH48_3223 IPR000792 Transcription regulator LuxR, C-terminal CH48_3223 IPR011006 CheY-like superfamily CH48_3224 IPR001789 Signal transduction response regulator, receiver domain CH48_3224 IPR028141 Transcriptional regulator CH48_3224 IPR011006 CheY-like superfamily CH48_3224 IPR024187 Signal transduction response regulator, citrate/malate metabolism CH48_3226 IPR003594 Histidine kinase/HSP90-like ATPase CH48_3226 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH48_3226 IPR005467 Histidine kinase domain CH48_3226 IPR000014 PAS domain CH48_3226 IPR035965 PAS domain superfamily CH48_3226 IPR013767 PAS fold CH48_3226 IPR033463 Single cache domain 3 CH48_3226 IPR029151 Periplasmic sensor-like domain superfamily CH48_3226 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CH48_3226 IPR039506 SpoOB, alpha-helical domain CH48_3226 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB CH48_3229 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein CH48_3229 IPR006495 Citrate lyase acyl carrier protein CitD CH48_323 IPR002178 PTS EIIA type-2 domain CH48_323 IPR016152 Phosphotransferase/anion transporter CH48_3230 IPR040442 Pyruvate kinase-like domain superfamily CH48_3230 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CH48_3230 IPR011206 Citrate lyase beta subunit-like CH48_3230 IPR005000 HpcH/HpaI aldolase/citrate lyase domain CH48_3230 IPR006475 Citrate lyase, beta subunit, bacteria CH48_3231 IPR006472 Citrate lyase, alpha subunit CH48_3231 IPR037171 NagB/RpiA transferase-like CH48_3232 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase CH48_3232 IPR002736 Triphosphoribosyl-dephospho-CoA protein CH48_3232 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG CH48_3233 IPR002736 Triphosphoribosyl-dephospho-CoA protein CH48_3233 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG CH48_3234 IPR030676 Citrate carrier CitT-related CH48_3234 IPR001898 Solute carrier family 13 CH48_3235 IPR004681 TRAP transporter large membrane protein DctM CH48_3235 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CH48_3237 IPR004682 TRAP transporter solute receptor, DctP family CH48_3237 IPR038404 TRAP transporter solute receptor DctP superfamily CH48_3237 IPR018389 TRAP transporter solute receptor DctP/TeaA CH48_3238 IPR003542 Enterobactin synthetase-like, component D CH48_3238 IPR041354 4'-phosphopantetheinyl transferase, N-terminal domain CH48_3238 IPR037143 4'-phosphopantetheinyl transferase domain superfamily CH48_3238 IPR008278 4'-phosphopantetheinyl transferase domain CH48_3240 IPR020846 Major facilitator superfamily domain CH48_3240 IPR005829 Sugar transporter, conserved site CH48_3240 IPR036259 MFS transporter superfamily CH48_3240 IPR003663 Sugar/inositol transporter CH48_3240 IPR005828 Major facilitator, sugar transporter-like CH48_3241 IPR002114 Phosphotransferase system, HPr serine phosphorylation site CH48_3241 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CH48_3241 IPR002178 PTS EIIA type-2 domain CH48_3241 IPR016152 Phosphotransferase/anion transporter CH48_3241 IPR016258 Multiphosphoryl transfer protein FruB CH48_3241 IPR035895 HPr-like superfamily CH48_3241 IPR000032 Phosphocarrier protein HPr-like CH48_3242 IPR018636 Protein of unknown function DUF2058 CH48_3243 IPR006145 Pseudouridine synthase, RsuA/RluA CH48_3243 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site CH48_3243 IPR020103 Pseudouridine synthase, catalytic domain superfamily CH48_3246 IPR013783 Immunoglobulin-like fold CH48_3246 IPR036316 Pili assembly chaperone, C-terminal domain superfamily CH48_3246 IPR008962 PapD-like superfamily CH48_3246 IPR016148 Pili assembly chaperone, C-terminal CH48_3246 IPR001829 Pili assembly chaperone, bacterial CH48_3246 IPR016147 Pili assembly chaperone, N-terminal CH48_3246 IPR018046 Pili assembly chaperone, conserved site CH48_3248 IPR042186 Outer membrane usher protein FimD, plug domain CH48_3248 IPR025949 PapC-like, C-terminal domain CH48_3248 IPR025885 PapC, N-terminal domain CH48_3248 IPR000015 Outer membrane usher protein CH48_3248 IPR018030 Fimbrial membrane usher, conserved site CH48_3248 IPR037224 PapC, N-terminal domain superfamily CH48_3249 IPR018046 Pili assembly chaperone, conserved site CH48_3249 IPR001829 Pili assembly chaperone, bacterial CH48_3249 IPR036316 Pili assembly chaperone, C-terminal domain superfamily CH48_3249 IPR008962 PapD-like superfamily CH48_3249 IPR013783 Immunoglobulin-like fold CH48_3249 IPR016147 Pili assembly chaperone, N-terminal CH48_3249 IPR016148 Pili assembly chaperone, C-terminal CH48_325 IPR004703 Phosphotransferase system, sugar-specific permease component CH48_3251 IPR001789 Signal transduction response regulator, receiver domain CH48_3251 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CH48_3251 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CH48_3251 IPR005467 Histidine kinase domain CH48_3251 IPR003594 Histidine kinase/HSP90-like ATPase CH48_3251 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CH48_3251 IPR013767 PAS fold CH48_3251 IPR035965 PAS domain superfamily CH48_3251 IPR011006 CheY-like superfamily CH48_3251 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH48_3251 IPR000014 PAS domain CH48_3251 IPR000700 PAS-associated, C-terminal CH48_3251 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CH48_3251 IPR036641 HPT domain superfamily CH48_3251 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CH48_3252 IPR000792 Transcription regulator LuxR, C-terminal CH48_3252 IPR001789 Signal transduction response regulator, receiver domain CH48_3252 IPR011006 CheY-like superfamily CH48_3252 IPR016032 Signal transduction response regulator, C-terminal effector CH48_3254 IPR010384 MtfA family CH48_3254 IPR024079 Metallopeptidase, catalytic domain superfamily CH48_3254 IPR042252 MtfA, N-terminal CH48_3255 IPR000577 Carbohydrate kinase, FGGY CH48_3255 IPR018484 Carbohydrate kinase, FGGY, N-terminal CH48_3255 IPR018483 Carbohydrate kinase, FGGY, conserved site CH48_3255 IPR018485 Carbohydrate kinase, FGGY, C-terminal CH48_3260 IPR025949 PapC-like, C-terminal domain CH48_3260 IPR018030 Fimbrial membrane usher, conserved site CH48_3260 IPR025885 PapC, N-terminal domain CH48_3260 IPR037224 PapC, N-terminal domain superfamily CH48_3260 IPR000015 Outer membrane usher protein CH48_3260 IPR042186 Outer membrane usher protein FimD, plug domain CH48_3261 IPR016147 Pili assembly chaperone, N-terminal CH48_3261 IPR013783 Immunoglobulin-like fold CH48_3261 IPR008962 PapD-like superfamily CH48_3261 IPR036316 Pili assembly chaperone, C-terminal domain superfamily CH48_3266 IPR033379 Histidine acid phosphatase active site CH48_3266 IPR000560 Histidine phosphatase superfamily, clade-2 CH48_3266 IPR029033 Histidine phosphatase superfamily CH48_3267 IPR017704 Putative selenium-binding protein YdfZ CH48_3270 IPR019713 Inner membrane protein YlaC CH48_3271 IPR042104 Polyketide synthase, dehydratase domain superfamily CH48_3271 IPR011032 GroES-like superfamily CH48_3271 IPR014043 Acyl transferase CH48_3271 IPR018201 Beta-ketoacyl synthase, active site CH48_3271 IPR014031 Beta-ketoacyl synthase, C-terminal CH48_3271 IPR001227 Acyl transferase domain superfamily CH48_3271 IPR014030 Beta-ketoacyl synthase, N-terminal CH48_3271 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding CH48_3271 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CH48_3271 IPR013149 Alcohol dehydrogenase, C-terminal CH48_3271 IPR036291 NAD(P)-binding domain superfamily CH48_3271 IPR036736 ACP-like superfamily CH48_3271 IPR013154 Alcohol dehydrogenase, N-terminal CH48_3271 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CH48_3271 IPR020843 Polyketide synthase, enoylreductase domain CH48_3271 IPR020807 Polyketide synthase, dehydratase domain CH48_3271 IPR032821 Ketoacyl-synthetase, C-terminal extension CH48_3271 IPR009081 Phosphopantetheine binding ACP domain CH48_3271 IPR016039 Thiolase-like CH48_3271 IPR020806 Polyketide synthase, phosphopantetheine-binding domain CH48_3271 IPR013968 Polyketide synthase, ketoreductase domain CH48_3273 IPR001207 Transposase, mutator type CH48_3274 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily CH48_3274 IPR014718 Glycoside hydrolase-type carbohydrate-binding CH48_3274 IPR004199 Beta galactosidase small chain/ domain 5 CH48_3274 IPR017853 Glycoside hydrolase superfamily CH48_3274 IPR006104 Glycosyl hydrolases family 2, sugar binding domain CH48_3274 IPR006101 Glycoside hydrolase, family 2 CH48_3274 IPR032312 Beta-galactosidase, domain 4 CH48_3274 IPR008979 Galactose-binding-like domain superfamily CH48_3274 IPR023230 Glycoside hydrolase, family 2, conserved site CH48_3274 IPR023232 Glycoside hydrolase, family 2, active site CH48_3274 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase CH48_3274 IPR006103 Glycoside hydrolase family 2, catalytic domain CH48_3274 IPR011013 Galactose mutarotase-like domain superfamily CH48_3274 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich CH48_3274 IPR013783 Immunoglobulin-like fold CH48_3275 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CH48_3275 IPR000843 LacI-type HTH domain CH48_3275 IPR028082 Periplasmic binding protein-like I CH48_3276 IPR002059 Cold-shock protein, DNA-binding CH48_3276 IPR012156 Cold shock, CspA CH48_3276 IPR019844 Cold-shock (CSD) domain CH48_3276 IPR012340 Nucleic acid-binding, OB-fold CH48_3276 IPR011129 Cold shock domain CH48_3278 IPR019717 Dextransucrase DSRB CH48_3279 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily CH48_3279 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding CH48_3279 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CH48_3279 IPR003660 HAMP domain CH48_3279 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CH48_3279 IPR004090 Chemotaxis methyl-accepting receptor CH48_328 IPR000086 NUDIX hydrolase domain CH48_328 IPR015797 NUDIX hydrolase-like domain superfamily CH48_328 IPR024195 NUDIX hydrolase, YfcD, predicted CH48_3282 IPR003416 MgtC/SapB/SrpB/YhiD family CH48_3283 IPR006415 P-type ATPase, subfamily IIIB CH48_3283 IPR001757 P-type ATPase CH48_3283 IPR006068 Cation-transporting P-type ATPase, C-terminal CH48_3283 IPR008250 P-type ATPase, A domain superfamily CH48_3283 IPR023298 P-type ATPase, transmembrane domain superfamily CH48_3283 IPR018303 P-type ATPase, phosphorylation site CH48_3283 IPR023299 P-type ATPase, cytoplasmic domain N CH48_3283 IPR004014 Cation-transporting P-type ATPase, N-terminal CH48_3283 IPR036412 HAD-like superfamily CH48_3283 IPR023214 HAD superfamily CH48_3284 IPR020843 Polyketide synthase, enoylreductase domain CH48_3284 IPR041694 Oxidoreductase, N-terminal domain CH48_3284 IPR011032 GroES-like superfamily CH48_3284 IPR013149 Alcohol dehydrogenase, C-terminal CH48_3284 IPR036291 NAD(P)-binding domain superfamily CH48_3285 IPR006016 UspA CH48_3285 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH48_3285 IPR006015 Universal stress protein A family CH48_3286 IPR036194 Flagellar transcriptional activator FlhD superfamily CH48_3286 IPR023559 Flagellar transcriptional activator FlhD CH48_3287 IPR007944 Flagellar transcriptional activator FlhC CH48_3288 IPR000540 Flagellar motor protein MotA, conserved site CH48_3288 IPR022522 Flagellar motor stator, MotA CH48_3288 IPR002898 MotA/TolQ/ExbB proton channel CH48_3289 IPR036737 OmpA-like domain superfamily CH48_3289 IPR006665 OmpA-like domain CH48_3289 IPR025713 Motility protein B, N-terminal domain CH48_329 IPR020935 Phosphodiesterase YfcE, conserved site CH48_329 IPR041802 YfcE-like, metallophosphatase domain CH48_329 IPR029052 Metallo-dependent phosphatase-like CH48_329 IPR024654 Calcineurin-like phosphoesterase domain, lpxH-type CH48_329 IPR000979 Phosphodiesterase MJ0936/Vps29 CH48_3290 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CH48_3290 IPR005467 Histidine kinase domain CH48_3290 IPR036641 HPT domain superfamily CH48_3290 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CH48_3290 IPR003594 Histidine kinase/HSP90-like ATPase CH48_3290 IPR015162 CheY binding CH48_3290 IPR002545 CheW-like domain CH48_3290 IPR036061 CheW-like domain superfamily CH48_3290 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily CH48_3290 IPR004105 Histidine kinase CheA-like, homodimeric domain CH48_3290 IPR035891 CheY-binding domain of CheA CH48_3290 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH48_3290 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CH48_3291 IPR036061 CheW-like domain superfamily CH48_3291 IPR002545 CheW-like domain CH48_3291 IPR039315 Chemotaxis protein CheW CH48_3292 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding CH48_3292 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CH48_3292 IPR004090 Chemotaxis methyl-accepting receptor CH48_3292 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CH48_3292 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily CH48_3292 IPR003660 HAMP domain CH48_3293 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily CH48_3293 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding CH48_3293 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CH48_3293 IPR003660 HAMP domain CH48_3293 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CH48_3293 IPR004090 Chemotaxis methyl-accepting receptor CH48_3294 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CH48_3294 IPR000780 MCP methyltransferase, CheR-type CH48_3294 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH48_3294 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily CH48_3294 IPR026024 Chemotaxis protein methyltransferase CheR CH48_3294 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal CH48_3295 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase CH48_3295 IPR011006 CheY-like superfamily CH48_3295 IPR001789 Signal transduction response regulator, receiver domain CH48_3295 IPR035909 Methylesterase CheB, C-terminal CH48_3295 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type CH48_3296 IPR001789 Signal transduction response regulator, receiver domain CH48_3296 IPR011006 CheY-like superfamily CH48_3297 IPR007439 Chemotaxis phosphatase, CheZ CH48_3299 IPR006135 Type III secretion system substrate exporter CH48_3299 IPR006136 Flagellar biosynthetic protein FlhB CH48_3299 IPR029025 Type III secretion system substrate exporter, C-terminal CH48_3300 IPR042193 FHIPEP, domain 3 CH48_3300 IPR042196 FHIPEP, domain 4 CH48_3300 IPR001712 Type III secretion system FHIPEP CH48_3300 IPR042194 FHIPEP, domain 1 CH48_3300 IPR025505 FHIPEP conserved site CH48_3300 IPR006301 Flagellar biosynthesis protein FlhA CH48_3301 IPR009420 Flagellar protein FlhE CH48_3303 IPR007809 FlgN-like protein CH48_3303 IPR036679 FlgN-like superfamily CH48_3304 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CH48_3304 IPR016186 C-type lectin-like/link domain superfamily CH48_3304 IPR016187 C-type lectin fold CH48_3304 IPR013117 Intimin, C-terminal CH48_3304 IPR015217 Invasin, domain 3 CH48_3304 IPR013783 Immunoglobulin-like fold CH48_3304 IPR024519 Inverse autotransporter, beta-domain CH48_3304 IPR008964 Invasin/intimin cell-adhesion fragments CH48_3304 IPR038177 Inverse autotransporter, beta-domain superfamily CH48_3304 IPR003535 Intimin/invasin bacterial adhesion mediator protein CH48_3305 IPR007412 Anti-sigma-28 factor, FlgM CH48_3305 IPR031316 Anti-sigma-28 factor FlgM, C-terminal CH48_3305 IPR035890 Anti-sigma-28 factor FlgM superfamily CH48_3306 IPR013974 SAF domain CH48_3306 IPR041231 FlgA, N-terminal CH48_3306 IPR039246 Flagellar protein FlgA CH48_3306 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal CH48_3307 IPR019776 Flagellar basal body rod protein, conserved site CH48_3307 IPR001444 Flagellar basal body rod protein, N-terminal CH48_3307 IPR006300 Flagellar basal-body rod protein FlgB CH48_3308 IPR001444 Flagellar basal body rod protein, N-terminal CH48_3308 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CH48_3308 IPR006299 Flagellar basal-body rod protein FlgC CH48_3308 IPR019776 Flagellar basal body rod protein, conserved site CH48_3309 IPR005648 Flagellar hook capping protein CH48_3309 IPR025965 FlgD Ig-like domain CH48_3309 IPR025963 FlgD Tudor-like domain CH48_331 IPR001509 NAD-dependent epimerase/dehydratase CH48_331 IPR036291 NAD(P)-binding domain superfamily CH48_331 IPR010099 Epimerase family protein SDR39U1 CH48_331 IPR013549 Domain of unknown function DUF1731 CH48_3310 IPR011491 Flagellar hook protein FlgE CH48_3310 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like CH48_3310 IPR001444 Flagellar basal body rod protein, N-terminal CH48_3310 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CH48_3310 IPR019776 Flagellar basal body rod protein, conserved site CH48_3310 IPR020013 Flagellar hook-basal body protein, FlgE/F/G CH48_3310 IPR037058 Flagellar hook protein FlgE superfamily CH48_3311 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CH48_3311 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like CH48_3311 IPR020013 Flagellar hook-basal body protein, FlgE/F/G CH48_3311 IPR019776 Flagellar basal body rod protein, conserved site CH48_3311 IPR001444 Flagellar basal body rod protein, N-terminal CH48_3312 IPR012834 Flagellar basal-body rod FlgG CH48_3312 IPR019776 Flagellar basal body rod protein, conserved site CH48_3312 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like CH48_3312 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CH48_3312 IPR020013 Flagellar hook-basal body protein, FlgE/F/G CH48_3312 IPR001444 Flagellar basal body rod protein, N-terminal CH48_3313 IPR000527 Flagellar L-ring protein CH48_3314 IPR001782 Flagellar P-ring protein CH48_3315 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain CH48_3315 IPR013377 Peptidoglycan hydrolase FlgJ CH48_3315 IPR019301 Flagellar protein FlgJ, N-terminal CH48_3316 IPR001444 Flagellar basal body rod protein, N-terminal CH48_3316 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CH48_3316 IPR002371 Flagellar hook-associated protein 1 CH48_3317 IPR013384 Flagellar hook-associated protein 3 CH48_3317 IPR001029 Flagellin, D0/D1 domain CH48_3318 IPR002010 Type III secretion system inner membrane R protein CH48_3318 IPR006303 Flagellar biosynthesis protein FliR CH48_3319 IPR006305 Flagellar biosynthesis protein FliQ CH48_3319 IPR002191 Bacterial export protein family 3 CH48_3320 IPR005837 Flagellar transport protein FliP CH48_3320 IPR005838 Type III secretion system inner membrane P protein CH48_3321 IPR022781 Flagellar biosynthesis protein, FliO CH48_3322 IPR012826 Flagellar motor switch FliN CH48_3322 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb CH48_3322 IPR001543 Surface presentation of antigen (SpoA) CH48_3322 IPR036429 SpoA-like superfamily CH48_3322 IPR031576 Flagellar motor switch protein FliN, N-terminal CH48_3323 IPR001689 Flagellar motor switch protein FliM CH48_3323 IPR028976 CheC-like superfamily CH48_3323 IPR001543 Surface presentation of antigen (SpoA) CH48_3323 IPR036429 SpoA-like superfamily CH48_3324 IPR005503 Flagellar basal body-associated protein FliL CH48_3325 IPR038610 FliK-like, C-terminal domain superfamily CH48_3325 IPR001635 Flagellar hook-length control protein FliK CH48_3325 IPR021136 Flagellar hook-length control protein-like, C-terminal CH48_3326 IPR012823 Flagellar export FliJ CH48_3326 IPR018006 Flagellar FliJ, proteobacteria CH48_3327 IPR040627 T3SS EscN ATPase, C-terminal CH48_3327 IPR020005 Flagellar export ATPase FliI, clade 1 CH48_3327 IPR005714 ATPase, type III secretion system, FliI/YscN CH48_3327 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_3327 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CH48_3327 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site CH48_3327 IPR003593 AAA+ ATPase domain CH48_3327 IPR032463 ATPase, type III secretion system, FliI CH48_3328 IPR000563 Flagellar assembly protein FliH CH48_3328 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE CH48_3329 IPR000090 Flagellar motor switch protein FliG CH48_3329 IPR023087 Flagellar motor switch protein FliG, C-terminal CH48_3329 IPR011002 Flagellar motor switch protein FliG, alpha-helical CH48_3329 IPR028263 Flagellar motor switch protein FliG, N-terminal domain CH48_3329 IPR032779 Flagellar motor switch protein FliG, middle domain CH48_333 IPR003593 AAA+ ATPase domain CH48_333 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type CH48_333 IPR003439 ABC transporter-like CH48_333 IPR017871 ABC transporter, conserved site CH48_333 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_3330 IPR006182 Secretory protein YscJ/FliF CH48_3330 IPR000067 Flagellar M-ring protein FliF CH48_3330 IPR013556 Flagellar M-ring C-terminal CH48_3331 IPR001624 Flagellar hook-basal body complex protein FliE CH48_3334 IPR010391 DNA damage-inducible protein DinI-like CH48_3334 IPR036687 DinI-like superfamily CH48_3336 IPR011257 DNA glycosylase CH48_3336 IPR003265 HhH-GPD domain CH48_3337 IPR006675 HDIG domain CH48_3337 IPR037522 HD-GYP domain CH48_3337 IPR006674 HD domain CH48_3337 IPR003607 HD/PDEase domain CH48_3338 IPR020449 Transcription regulator HTH, AraC- type CH48_3338 IPR018062 HTH domain AraC-type, conserved site CH48_3338 IPR018060 DNA binding HTH domain, AraC-type CH48_3338 IPR009057 Homeobox-like domain superfamily CH48_3339 IPR008622 Flagellar protein FliT CH48_334 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CH48_334 IPR035906 MetI-like superfamily CH48_334 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CH48_3340 IPR036584 Flagellar protein FliS superfamily CH48_3340 IPR003713 Flagellar protein FliS CH48_3341 IPR010810 Flagellin hook, IN motif CH48_3341 IPR040026 Flagellar hook-associated protein 2 CH48_3341 IPR010809 Flagellar hook-associated protein 2, C-terminal CH48_3341 IPR003481 Flagellar hook-associated protein 2, N-terminal CH48_3342 IPR001492 Flagellin CH48_3342 IPR001029 Flagellin, D0/D1 domain CH48_3342 IPR014981 Flagellin D3 CH48_3343 IPR001492 Flagellin CH48_3343 IPR014981 Flagellin D3 CH48_3343 IPR001029 Flagellin, D0/D1 domain CH48_3344 IPR001492 Flagellin CH48_3344 IPR001029 Flagellin, D0/D1 domain CH48_3344 IPR014981 Flagellin D3 CH48_3346 IPR013324 RNA polymerase sigma factor, region 3/4-like CH48_3346 IPR028617 RNA polymerase sigma factor FliA CH48_3346 IPR013325 RNA polymerase sigma factor, region 2 CH48_3346 IPR012845 RNA polymerase sigma factor, FliA/WhiG CH48_3346 IPR007624 RNA polymerase sigma-70 region 3 CH48_3346 IPR007627 RNA polymerase sigma-70 region 2 CH48_3346 IPR000943 RNA polymerase sigma-70 CH48_3346 IPR014284 RNA polymerase sigma-70 like domain CH48_3346 IPR007630 RNA polymerase sigma-70 region 4 CH48_3347 IPR004107 Integrase, SAM-like, N-terminal CH48_3347 IPR022523 Flagellar regulator, FliZ CH48_3348 IPR005966 D-cysteine desulfhydrase CH48_3348 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase CH48_3348 IPR023702 D-cysteine desulphhydrase, bacterial CH48_3348 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CH48_3348 IPR001926 Pyridoxal-phosphate dependent enzyme CH48_335 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CH48_335 IPR030199 Histidine transport system permease protein HisQ CH48_335 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CH48_335 IPR035906 MetI-like superfamily CH48_3355 IPR013321 Arc-type ribbon-helix-helix CH48_3355 IPR024089 Proline dehydrogenase PutA, domain I/II CH48_3355 IPR024082 Proline dehydrogenase PutA, domain II CH48_3355 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 CH48_3355 IPR002872 Proline dehydrogenase domain CH48_3355 IPR010985 Ribbon-helix-helix CH48_3355 IPR015590 Aldehyde dehydrogenase domain CH48_3355 IPR016162 Aldehyde dehydrogenase, N-terminal CH48_3355 IPR024090 Proline dehydrogenase PutA, domain I CH48_3355 IPR025703 Bifunctional protein PutA CH48_3355 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CH48_3355 IPR029041 FAD-linked oxidoreductase-like CH48_3355 IPR016161 Aldehyde/histidinol dehydrogenase CH48_3355 IPR016163 Aldehyde dehydrogenase, C-terminal CH48_3355 IPR016160 Aldehyde dehydrogenase, cysteine active site CH48_3355 IPR041349 Proline utilization A proline dehydrogenase N-terminal domain CH48_3356 IPR011851 Sodium/proline symporter CH48_3356 IPR038377 Sodium/glucose symporter superfamily CH48_3356 IPR018212 Sodium/solute symporter, conserved site CH48_3356 IPR001734 Sodium/solute symporter CH48_3359 IPR008514 Type VI secretion system effector, Hcp CH48_3359 IPR003615 HNH nuclease CH48_3359 IPR036624 Hcp1-like superfamily CH48_336 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter CH48_336 IPR018313 Solute-binding protein family 3, conserved site CH48_336 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CH48_3360 IPR004923 Iron permease FTR1/Fip1/EfeU CH48_3361 IPR034981 EfeO/Algp7, imelysin-like domain CH48_3361 IPR028096 EfeO-type cupredoxin-like domain CH48_3361 IPR018976 Imelysin-like domain CH48_3361 IPR038352 Imelysin-like domain superfamily CH48_3361 IPR008972 Cupredoxin CH48_3362 IPR006313 Deferrochelatase/peroxidase EfeB CH48_3362 IPR006314 Dyp-type peroxidase CH48_3362 IPR011008 Dimeric alpha-beta barrel CH48_3362 IPR006311 Twin-arginine translocation pathway, signal sequence CH48_3363 IPR008254 Flavodoxin/nitric oxide synthase CH48_3363 IPR005025 NADPH-dependent FMN reductase-like CH48_3363 IPR037513 NAD(P)H dehydrogenase (quinone), prokaryotic CH48_3363 IPR010089 Flavoprotein WrbA-like CH48_3363 IPR029039 Flavoprotein-like superfamily CH48_3365 IPR019936 Mutatrotase, YjhT-like CH48_3365 IPR006652 Kelch repeat type 1 CH48_3365 IPR015915 Kelch-type beta propeller CH48_3366 IPR019918 Pyrimidine permease RutG, predicted CH48_3366 IPR006043 Xanthine/uracil/vitamin C permease CH48_3366 IPR006042 Xanthine/uracil permease CH48_3369 IPR019917 FMN reductase (NADH) RutF CH48_3369 IPR002563 Flavin reductase like domain CH48_3369 IPR012349 FMN-binding split barrel CH48_337 IPR036551 Flavin prenyltransferase-like CH48_337 IPR003382 Flavoprotein CH48_337 IPR004507 Flavin prenyltransferase UbiX-like CH48_3370 IPR023936 NADH dehydrogenase/NAD(P)H nitroreductase, putative, RutE CH48_3370 IPR000415 Nitroreductase-like CH48_3370 IPR029479 Nitroreductase CH48_3371 IPR029058 Alpha/Beta hydrolase fold CH48_3371 IPR019913 Pyrimidine utilisation protein RutD CH48_3371 IPR000073 Alpha/beta hydrolase fold-1 CH48_3372 IPR019897 RidA, conserved site CH48_3372 IPR019898 Putative aminoacrylate peracid reductase RutC CH48_3372 IPR035959 RutC-like superfamily CH48_3372 IPR006175 YjgF/YER057c/UK114 family CH48_3373 IPR019916 Isochorismatase, RutB CH48_3373 IPR036380 Isochorismatase-like superfamily CH48_3373 IPR000868 Isochorismatase-like CH48_3374 IPR036661 Luciferase-like domain superfamily CH48_3374 IPR019914 Pyrimidine monooxygenase RutA CH48_3374 IPR011251 Luciferase-like domain CH48_3375 IPR013573 Transcription regulator YcdC, C-terminal CH48_3375 IPR019915 Transcription regulator, pyrimidine utilisation, RutR CH48_3375 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CH48_3375 IPR001647 DNA-binding HTH domain, TetR-type CH48_3375 IPR009057 Homeobox-like domain superfamily CH48_3376 IPR004841 Amino acid permease/ SLC12A domain CH48_3376 IPR004840 Amino acid permease, conserved site CH48_3378 IPR002514 Transposase IS3/IS911family CH48_3378 IPR009057 Homeobox-like domain superfamily CH48_3379 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH48_3379 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC CH48_3379 IPR013216 Methyltransferase type 11 CH48_338 IPR035584 Amidophosphoribosyltransferase, N-terminal CH48_338 IPR000836 Phosphoribosyltransferase domain CH48_338 IPR029057 Phosphoribosyltransferase-like CH48_338 IPR029055 Nucleophile aminohydrolases, N-terminal CH48_338 IPR005854 Amidophosphoribosyltransferase CH48_338 IPR017932 Glutamine amidotransferase type 2 domain CH48_3382 IPR013776 Alpha-amylase, thermostable CH48_3382 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta CH48_3382 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CH48_3382 IPR013780 Glycosyl hydrolase, all-beta CH48_3382 IPR017853 Glycoside hydrolase superfamily CH48_3384 IPR009707 Membrane protein GlpM/YdgC CH48_3386 IPR001789 Signal transduction response regulator, receiver domain CH48_3386 IPR016032 Signal transduction response regulator, C-terminal effector CH48_3386 IPR011006 CheY-like superfamily CH48_3386 IPR000792 Transcription regulator LuxR, C-terminal CH48_3387 IPR038476 UvrC homology region 2 superfamily CH48_3387 IPR001162 UvrC family homology region CH48_3387 IPR000305 GIY-YIG endonuclease CH48_3387 IPR035901 GIY-YIG endonuclease superfamily CH48_3387 IPR004791 UvrABC system, subunit C CH48_3387 IPR001943 UVR domain CH48_3387 IPR010994 RuvA domain 2-like CH48_3387 IPR036876 UVR domain superfamily CH48_3388 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial CH48_3388 IPR000462 CDP-alcohol phosphatidyltransferase CH48_3388 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase CH48_339 IPR003825 Colicin V production, CvpA CH48_3392 IPR007684 Zinc finger, Ogr/Delta-type CH48_3399 IPR020287 Tail sheath protein, C-terminal domain CH48_3399 IPR035089 Tail sheath protein, subtilisin-like domain CH48_34 IPR036259 MFS transporter superfamily CH48_34 IPR020846 Major facilitator superfamily domain CH48_34 IPR005279 Dipeptide/tripeptide permease CH48_34 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site CH48_34 IPR000109 Proton-dependent oligopeptide transporter family CH48_340 IPR032898 Cell division protein DedD CH48_340 IPR007730 Sporulation-like domain CH48_340 IPR036680 Sporulation-like domain superfamily CH48_3401 IPR010106 Recombination-promoting nuclease RpnA CH48_3401 IPR006842 Transposase (putative), YhgA-like CH48_3406 IPR007337 RelB antitoxin/Antitoxin DinJ CH48_3406 IPR026262 Antitoxin DinJ CH48_3406 IPR013321 Arc-type ribbon-helix-helix CH48_3407 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family CH48_3407 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily CH48_3407 IPR004386 Toxin-antitoxin system, YafQ-like toxin CH48_341 IPR018109 Folylpolyglutamate synthetase, conserved site CH48_341 IPR013221 Mur ligase, central CH48_341 IPR036615 Mur ligase, C-terminal domain superfamily CH48_341 IPR004101 Mur ligase, C-terminal CH48_341 IPR036565 Mur-like, catalytic domain superfamily CH48_341 IPR001645 Folylpolyglutamate synthetase CH48_3410 IPR011083 Phage tail collar domain CH48_3410 IPR037053 Phage tail collar domain superfamily CH48_342 IPR041010 Acetyl-coA carboxylase zinc finger domain CH48_342 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal CH48_342 IPR029045 ClpP/crotonase-like domain superfamily CH48_342 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit CH48_342 IPR034733 Acetyl-CoA carboxylase CH48_3427 IPR001207 Transposase, mutator type CH48_3429 IPR000847 Transcription regulator HTH, LysR CH48_3429 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_3429 IPR005119 LysR, substrate-binding CH48_3429 IPR036390 Winged helix DNA-binding domain superfamily CH48_343 IPR032818 DedA family CH48_343 IPR032816 SNARE associated Golgi protein CH48_3432 IPR018357 Hexapeptide transferase, conserved site CH48_3432 IPR011004 Trimeric LpxA-like superfamily CH48_3432 IPR001451 Hexapeptide repeat CH48_3435 IPR010534 Bacteriophage 933W, GpQ CH48_3436 IPR019689 Toxin GhoT/OrtT CH48_3437 IPR002196 Glycoside hydrolase, family 24 CH48_3437 IPR034690 Endolysin T4 type CH48_3437 IPR023346 Lysozyme-like domain superfamily CH48_3438 IPR029058 Alpha/Beta hydrolase fold CH48_3438 IPR000073 Alpha/beta hydrolase fold-1 CH48_3439 IPR029024 TerB-like CH48_3439 IPR007486 Inner membrane protein YebE CH48_344 IPR020095 Pseudouridine synthase I, TruA, C-terminal CH48_344 IPR020103 Pseudouridine synthase, catalytic domain superfamily CH48_344 IPR001406 Pseudouridine synthase I, TruA CH48_344 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain CH48_3440 IPR036390 Winged helix DNA-binding domain superfamily CH48_3440 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_3440 IPR000847 Transcription regulator HTH, LysR CH48_3440 IPR005119 LysR, substrate-binding CH48_3441 IPR001466 Beta-lactamase-related CH48_3441 IPR001586 Beta-lactamase, class-C active site CH48_3441 IPR012338 Beta-lactamase/transpeptidase-like CH48_3442 IPR012676 TGS-like CH48_3442 IPR041706 YchF, N-terminal CH48_3442 IPR013029 YchF, C-terminal domain CH48_3442 IPR023192 TGS-like domain superfamily CH48_3442 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 CH48_3442 IPR012675 Beta-grasp domain superfamily CH48_3442 IPR031167 OBG-type guanine nucleotide-binding (G) domain CH48_3442 IPR004095 TGS CH48_3442 IPR006073 GTP binding domain CH48_3442 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_3444 IPR001328 Peptidyl-tRNA hydrolase CH48_3444 IPR018171 Peptidyl-tRNA hydrolase, conserved site CH48_3444 IPR036416 Peptidyl-tRNA hydrolase superfamily CH48_3445 IPR019698 Protein of unknown function DUF2583 CH48_3447 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site CH48_3447 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain CH48_3447 IPR000836 Phosphoribosyltransferase domain CH48_3447 IPR029057 Phosphoribosyltransferase-like CH48_3447 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type CH48_3447 IPR005946 Ribose-phosphate pyrophosphokinase CH48_3448 IPR020568 Ribosomal protein S5 domain 2-type fold CH48_3448 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CH48_3448 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase CH48_3448 IPR036554 GHMP kinase, C-terminal domain superfamily CH48_3448 IPR006204 GHMP kinase N-terminal domain CH48_3448 IPR013750 GHMP kinase, C-terminal domain CH48_3449 IPR004565 Outer membrane lipoprotein LolB CH48_3449 IPR029046 Lipoprotein localisation LolA/LolB/LppX CH48_345 IPR036291 NAD(P)-binding domain superfamily CH48_345 IPR000534 Semialdehyde dehydrogenase, NAD-binding CH48_345 IPR012280 Semialdehyde dehydrogenase, dimerisation domain CH48_3450 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CH48_3450 IPR036291 NAD(P)-binding domain superfamily CH48_3450 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily CH48_3450 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily CH48_3450 IPR018214 Glutamyl-tRNA reductase, conserved site CH48_3450 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase CH48_3450 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain CH48_3450 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal CH48_3451 IPR005139 Peptide chain release factor CH48_3451 IPR000352 Peptide chain release factor class I CH48_3451 IPR004373 Peptide chain release factor 1 CH48_3452 IPR025714 Methyltransferase domain CH48_3452 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH48_3452 IPR040758 Release factor glutamine methyltransferase, N-terminal domain CH48_3452 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CH48_3452 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific CH48_3452 IPR004556 Methyltransferase HemK-like CH48_3453 IPR007360 Invasion gene expression up-regulator, SirB CH48_3454 IPR032698 Protein SirB1, N-terminal CH48_3455 IPR013785 Aldolase-type TIM barrel CH48_3455 IPR006218 DAHP synthetase I/KDSA CH48_3455 IPR006269 3-deoxy-8-phosphooctulonate synthase CH48_3456 IPR018045 Sulphate anion transporter, conserved site CH48_3456 IPR036513 STAS domain superfamily CH48_3456 IPR002645 STAS domain CH48_3456 IPR011547 SLC26A/SulP transporter domain CH48_3456 IPR001902 SLC26A/SulP transporter CH48_3458 IPR029787 Nucleotide cyclase CH48_3458 IPR009050 Globin-like superfamily CH48_3458 IPR000160 GGDEF domain CH48_3458 IPR039435 Diguanylate cyclase DosC, globin sensor domain CH48_3458 IPR012292 Globin/Protoglobin CH48_3460 IPR030395 Glycerophosphodiester phosphodiesterase domain CH48_3460 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily CH48_3462 IPR036291 NAD(P)-binding domain superfamily CH48_3462 IPR023514 Glyoxylate/hydroxypyruvate reductase A CH48_3462 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CH48_3463 IPR023710 Probable phosphatase YcdX CH48_3463 IPR003141 Polymerase/histidinol phosphatase, N-terminal CH48_3463 IPR016195 Polymerase/histidinol phosphatase-like CH48_3463 IPR004013 PHP domain CH48_3464 IPR036411 TorD-like superfamily CH48_3464 IPR020945 DMSO/Nitrate reductase chaperone CH48_3464 IPR026269 Tat proofreading chaperone DmsD-type CH48_3465 IPR010835 Protein of unknown function DUF1439 CH48_3466 IPR011701 Major facilitator superfamily CH48_3466 IPR020846 Major facilitator superfamily domain CH48_3466 IPR022855 Multidrug resistance protein MdtH CH48_3466 IPR036259 MFS transporter superfamily CH48_3469 IPR000182 GNAT domain CH48_3469 IPR016181 Acyl-CoA N-acyltransferase CH48_3470 IPR007432 Protein of unknown function DUF480 CH48_3470 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_3470 IPR036390 Winged helix DNA-binding domain superfamily CH48_3471 IPR036291 NAD(P)-binding domain superfamily CH48_3471 IPR000683 Oxidoreductase, N-terminal CH48_3472 IPR004268 Peptidoglycan biosynthesis protein MurJ CH48_3473 IPR004837 Sodium/calcium exchanger membrane region CH48_3473 IPR004713 Calcium/proton exchanger CH48_3477 IPR000847 Transcription regulator HTH, LysR CH48_3477 IPR036390 Winged helix DNA-binding domain superfamily CH48_3477 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_3477 IPR037408 HTH-type transcriptional regulator cbl, PBP2 domain CH48_3477 IPR005119 LysR, substrate-binding CH48_3478 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH48_3478 IPR003660 HAMP domain CH48_3478 IPR005467 Histidine kinase domain CH48_3478 IPR029095 NarX-like, N-terminal CH48_3478 IPR042295 NarX-like, N-terminal domain superfamily CH48_3478 IPR003594 Histidine kinase/HSP90-like ATPase CH48_3478 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing CH48_3478 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain CH48_3479 IPR003317 Cytochrome ubiquinol oxidase subunit 2 CH48_348 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain CH48_348 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CH48_348 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CH48_348 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CH48_348 IPR020921 Erythronate-4-phosphate dehydrogenase CH48_348 IPR036291 NAD(P)-binding domain superfamily CH48_348 IPR038251 PdxB, dimerisation domain superfamily CH48_348 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CH48_3480 IPR002585 Cytochrome ubiquinol oxidase subunit 1 CH48_3481 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CH48_3481 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_3481 IPR000524 Transcription regulator HTH, GntR CH48_3481 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CH48_3481 IPR015424 Pyridoxal phosphate-dependent transferase CH48_3481 IPR004839 Aminotransferase, class I/classII CH48_3481 IPR036390 Winged helix DNA-binding domain superfamily CH48_3482 IPR004636 Acetylornithine/Succinylornithine transaminase family CH48_3482 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria CH48_3482 IPR005814 Aminotransferase class-III CH48_3482 IPR015424 Pyridoxal phosphate-dependent transferase CH48_3482 IPR026330 Succinylornithine transaminase CH48_3482 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CH48_3482 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CH48_3483 IPR017650 Arginine N-succinyltransferase CH48_3483 IPR007041 Arginine N-succinyltransferase AstA/AruG CH48_3483 IPR016181 Acyl-CoA N-acyltransferase CH48_3484 IPR017649 Succinylglutamate-semialdehyde dehydrogenase CH48_3484 IPR015590 Aldehyde dehydrogenase domain CH48_3484 IPR016162 Aldehyde dehydrogenase, N-terminal CH48_3484 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CH48_3484 IPR016163 Aldehyde dehydrogenase, C-terminal CH48_3484 IPR016161 Aldehyde/histidinol dehydrogenase CH48_3484 IPR016160 Aldehyde dehydrogenase, cysteine active site CH48_3485 IPR007079 Succinylarginine dihydrolase CH48_3485 IPR037031 Succinylarginine dihydrolase superfamily CH48_3486 IPR016681 Succinylglutamate desuccinylase CH48_3486 IPR007036 Succinylglutamate desuccinylase/aspartoacylase CH48_3487 IPR013793 Porin, Gram-negative type, conserved site CH48_3487 IPR001702 Porin, Gram-negative type CH48_3487 IPR001897 Porin, gammaproteobacterial CH48_3487 IPR023614 Porin domain superfamily CH48_3487 IPR033900 Porin domain, Gram-negative type CH48_3488 IPR036397 Ribonuclease H superfamily CH48_3488 IPR001584 Integrase, catalytic core CH48_3488 IPR012337 Ribonuclease H-like superfamily CH48_3488 IPR025948 HTH-like domain CH48_3492 IPR006680 Amidohydrolase-related CH48_3492 IPR005920 Imidazolonepropionase CH48_3492 IPR011059 Metal-dependent hydrolase, composite domain superfamily CH48_3492 IPR032466 Metal-dependent hydrolase CH48_3493 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily CH48_3493 IPR000524 Transcription regulator HTH, GntR CH48_3493 IPR010248 Histidine utilization repressor CH48_3493 IPR011663 UbiC transcription regulator-associated CH48_3493 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_3493 IPR036390 Winged helix DNA-binding domain superfamily CH48_3494 IPR011059 Metal-dependent hydrolase, composite domain superfamily CH48_3494 IPR032466 Metal-dependent hydrolase CH48_3494 IPR023512 Deaminase MtaD/DadD CH48_3494 IPR006680 Amidohydrolase-related CH48_3495 IPR010282 Uncharacterised protein family HutD/Ves CH48_3495 IPR023482 Uncharacterised protein family Ves CH48_3495 IPR014710 RmlC-like jelly roll fold CH48_3495 IPR011051 RmlC-like cupin domain superfamily CH48_3496 IPR015304 ZinT domain CH48_3496 IPR012674 Calycin CH48_350 IPR000620 EamA domain CH48_3500 IPR036779 LysM domain superfamily CH48_3500 IPR018392 LysM domain CH48_3500 IPR011055 Duplicated hybrid motif CH48_3500 IPR016047 Peptidase M23 CH48_3501 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY CH48_3501 IPR023788 D-tagatose-bisphosphate aldolase, class II, subunit KbaY CH48_3501 IPR013785 Aldolase-type TIM barrel CH48_3501 IPR000771 Fructose-bisphosphate aldolase, class-II CH48_3502 IPR014180 Sugar isomerase, AgaS CH48_3502 IPR035464 AgaS, SIS domain CH48_3502 IPR001347 Sugar isomerase (SIS) CH48_3502 IPR035466 GlmS/AgaS, SIS domain 1 CH48_3503 IPR033887 PTS system mannose/sorbose specific IIA subunit CH48_3503 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily CH48_3503 IPR004701 Phosphotransferase system, mannose-type IIA component CH48_3504 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component CH48_3505 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit CH48_3506 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily CH48_3506 IPR004720 Phosphotransferase system, sorbose subfamily IIB component CH48_3506 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup CH48_3507 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ-like CH48_3507 IPR023435 D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit KbaZ CH48_3507 IPR013785 Aldolase-type TIM barrel CH48_3508 IPR014036 DeoR C-terminal sensor domain CH48_3508 IPR018356 Transcription regulator, HTH DeoR-type, conserved site CH48_3508 IPR001034 DeoR-type HTH domain CH48_3508 IPR037171 NagB/RpiA transferase-like CH48_3508 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_3508 IPR036390 Winged helix DNA-binding domain superfamily CH48_351 IPR000620 EamA domain CH48_3512 IPR002942 RNA-binding S4 domain CH48_3512 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F CH48_3512 IPR006145 Pseudouridine synthase, RsuA/RluA CH48_3512 IPR020103 Pseudouridine synthase, catalytic domain superfamily CH48_3512 IPR036986 RNA-binding S4 domain superfamily CH48_3512 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site CH48_3512 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain CH48_3513 IPR004445 Sodium/glutamate symport carrier protein GltS CH48_3515 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal CH48_3515 IPR003346 Transposase, IS116/IS110/IS902 CH48_3516 IPR003346 Transposase, IS116/IS110/IS902 CH48_3516 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal CH48_3517 IPR027555 tRNA (mo5U34)-methyltransferase-like CH48_3517 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH48_3517 IPR010017 tRNA U34 carboxymethyltransferase CH48_3518 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH48_3518 IPR041698 Methyltransferase domain 25 CH48_3518 IPR005271 Carboxy-S-adenosyl-L-methionine synthase CH48_3519 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein CH48_3519 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily CH48_352 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CH48_352 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CH48_352 IPR004839 Aminotransferase, class I/classII CH48_352 IPR015424 Pyridoxal phosphate-dependent transferase CH48_3520 IPR002763 Protein of unknown function DUF72 CH48_3520 IPR036520 UPF0759 superfamily CH48_3521 IPR036380 Isochorismatase-like superfamily CH48_3521 IPR000868 Isochorismatase-like CH48_3522 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) CH48_3522 IPR004115 GAD-like domain superfamily CH48_3522 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CH48_3522 IPR029351 GAD domain CH48_3522 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb CH48_3522 IPR006195 Aminoacyl-tRNA synthetase, class II CH48_3522 IPR004524 Aspartate-tRNA ligase, type 1 CH48_3522 IPR012340 Nucleic acid-binding, OB-fold CH48_3523 IPR000086 NUDIX hydrolase domain CH48_3523 IPR020084 NUDIX hydrolase, conserved site CH48_3523 IPR015797 NUDIX hydrolase-like domain superfamily CH48_3523 IPR003564 Dihydroneopterin triphosphate diphosphatase CH48_3524 IPR029072 YebC-like CH48_3524 IPR026564 Transcriptional regulator TACO1-like, domain 3 CH48_3524 IPR002876 Transcriptional regulator TACO1-like CH48_3524 IPR017856 Integrase-like, N-terminal CH48_3525 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site CH48_3525 IPR002176 Crossover junction endodeoxyribonuclease RuvC CH48_3525 IPR012337 Ribonuclease H-like superfamily CH48_3525 IPR036397 Ribonuclease H superfamily CH48_3526 IPR011114 Holliday junction DNA helicase RuvA, C-terminal CH48_3526 IPR010994 RuvA domain 2-like CH48_3526 IPR000085 Bacterial DNA recombination protein RuvA CH48_3526 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial CH48_3526 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 CH48_3526 IPR036267 RuvA, C-terminal domain superfamily CH48_3526 IPR012340 Nucleic acid-binding, OB-fold CH48_3527 IPR041445 RuvB, AAA lid domain CH48_3527 IPR003593 AAA+ ATPase domain CH48_3527 IPR004605 DNA helicase, Holliday junction RuvB-type CH48_3527 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_3527 IPR008824 RuvB-like P-loop domain CH48_3527 IPR008823 RuvB C-terminal winged helix domain CH48_3527 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_3527 IPR036390 Winged helix DNA-binding domain superfamily CH48_3528 IPR005279 Dipeptide/tripeptide permease CH48_3528 IPR036259 MFS transporter superfamily CH48_3528 IPR000109 Proton-dependent oligopeptide transporter family CH48_3528 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site CH48_3528 IPR023778 Amino acid/peptide transporter family, dipeptide/tripeptide permease B CH48_3529 IPR037294 ABC transporter, BtuC-like CH48_3529 IPR001626 ABC transporter, TroCD-like CH48_353 IPR013766 Thioredoxin domain CH48_353 IPR017937 Thioredoxin, conserved site CH48_353 IPR036249 Thioredoxin-like superfamily CH48_353 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CH48_3530 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_3530 IPR017882 Zinc import ATP-binding protein ZnuC CH48_3530 IPR003439 ABC transporter-like CH48_3530 IPR003593 AAA+ ATPase domain CH48_3531 IPR006127 Periplasmic solute binding protein, ZnuA-like CH48_3531 IPR035520 High-affinity zinc uptake system protein ZnuA CH48_3532 IPR016047 Peptidase M23 CH48_3532 IPR011055 Duplicated hybrid motif CH48_3532 IPR018392 LysM domain CH48_3532 IPR013731 Opacity-associated protein A, N-terminal CH48_3533 IPR004960 Bacterial lipid A biosynthesis acyltransferase CH48_3533 IPR011921 Lipid A biosynthesis myristoyltransferase CH48_3535 IPR001207 Transposase, mutator type CH48_3536 IPR011037 Pyruvate kinase-like, insert domain superfamily CH48_3536 IPR018209 Pyruvate kinase, active site CH48_3536 IPR015806 Pyruvate kinase, insert domain superfamily CH48_3536 IPR036918 Pyruvate kinase, C-terminal domain superfamily CH48_3536 IPR015795 Pyruvate kinase, C-terminal CH48_3536 IPR040442 Pyruvate kinase-like domain superfamily CH48_3536 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CH48_3536 IPR001697 Pyruvate kinase CH48_3536 IPR015793 Pyruvate kinase, barrel CH48_3537 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_3537 IPR001347 Sugar isomerase (SIS) CH48_3537 IPR035472 RpiR-like, SIS domain CH48_3537 IPR000281 Helix-turn-helix protein RpiR CH48_3537 IPR009057 Homeobox-like domain superfamily CH48_3538 IPR001282 Glucose-6-phosphate dehydrogenase CH48_3538 IPR036291 NAD(P)-binding domain superfamily CH48_3538 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding CH48_3538 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal CH48_3538 IPR019796 Glucose-6-phosphate dehydrogenase, active site CH48_3539 IPR000887 KDPG/KHG aldolase CH48_3539 IPR031337 KDPG/KHG aldolase, active site 1 CH48_3539 IPR013785 Aldolase-type TIM barrel CH48_3539 IPR031338 KDPG/KHG aldolase, active site 2 CH48_3540 IPR023740 Spermidine export protein MdtJ CH48_3540 IPR000390 Small multidrug resistance protein family CH48_3541 IPR000390 Small multidrug resistance protein family CH48_3541 IPR023737 Spermidine export protein MdtI CH48_3542 IPR006175 YjgF/YER057c/UK114 family CH48_3542 IPR035709 RutC family, YoaB-like CH48_3542 IPR035959 RutC-like superfamily CH48_3542 IPR019897 RidA, conserved site CH48_3543 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type CH48_3543 IPR006935 Helicase/UvrB, N-terminal CH48_3543 IPR014001 Helicase superfamily 1/2, ATP-binding domain CH48_3543 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_3543 IPR006555 ATP-dependent helicase, C-terminal CH48_3544 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB CH48_3544 IPR000905 Gcp-like domain CH48_3545 IPR004658 Outer membrane lipoprotein Slp CH48_3546 IPR000873 AMP-dependent synthetase/ligase CH48_3546 IPR042099 AMP-dependent synthetase-like superfamily CH48_3546 IPR020845 AMP-binding, conserved site CH48_3546 IPR025110 AMP-binding enzyme, C-terminal domain CH48_3547 IPR002121 HRDC domain CH48_3547 IPR036397 Ribonuclease H superfamily CH48_3547 IPR012337 Ribonuclease H-like superfamily CH48_3547 IPR010997 HRDC-like superfamily CH48_3547 IPR006292 Ribonuclease D CH48_3547 IPR002562 3'-5' exonuclease domain CH48_3548 IPR036707 Cell division topological specificity factor MinE superfamily CH48_3548 IPR005527 Cell division topological specificity factor MinE CH48_3549 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_3549 IPR010223 ATP binding protein MinD, bacterial-type CH48_3549 IPR025501 ATP binding protein MinD CH48_3549 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CH48_355 IPR035671 DsbD gamma CH48_355 IPR017937 Thioredoxin, conserved site CH48_355 IPR003834 Cytochrome C biogenesis protein, transmembrane domain CH48_355 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily CH48_355 IPR036249 Thioredoxin-like superfamily CH48_355 IPR022910 Thiol:disulphide interchange protein DsbD CH48_355 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CH48_355 IPR013766 Thioredoxin domain CH48_3550 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal CH48_3550 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily CH48_3550 IPR007874 Septum formation inhibitor MinC, N-terminal CH48_3550 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily CH48_3550 IPR005526 Septum formation inhibitor MinC, C-terminal CH48_3550 IPR013033 Septum formation inhibitor MinC CH48_3552 IPR027354 YcgL domain CH48_3552 IPR038068 YcgL-like superfamily CH48_3553 IPR031304 Transglycosylase SLT domain 2 CH48_3553 IPR011757 Lytic transglycosylase MltB CH48_3553 IPR023346 Lysozyme-like domain superfamily CH48_3554 IPR011234 Fumarylacetoacetase-like, C-terminal CH48_3554 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily CH48_3555 IPR005358 Putative zinc- or iron-chelating domain containing protein CH48_3555 IPR008228 Uncharacterised conserved protein UCP006173 CH48_356 IPR023597 Flagellar regulator Flk CH48_3560 IPR011066 Mechanosensitive ion channel MscS, C-terminal CH48_3560 IPR023408 Mechanosensitive ion channel MscS domain superfamily CH48_3560 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 CH48_3560 IPR006686 Mechanosensitive ion channel MscS, conserved site CH48_3560 IPR010920 LSM domain superfamily CH48_3560 IPR006685 Mechanosensitive ion channel MscS CH48_3561 IPR036249 Thioredoxin-like superfamily CH48_3561 IPR034338 Glutathione S-transferases, subfamily 4, C-terminal CH48_3561 IPR004045 Glutathione S-transferase, N-terminal CH48_3561 IPR040079 Glutathione Transferase family CH48_3561 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CH48_3561 IPR010987 Glutathione S-transferase, C-terminal-like CH48_3566 IPR009950 Protein of unknown function DUF1480 CH48_3567 IPR003018 GAF domain CH48_3567 IPR000160 GGDEF domain CH48_3567 IPR029787 Nucleotide cyclase CH48_3567 IPR035919 EAL domain superfamily CH48_3567 IPR001294 Phytochrome CH48_3567 IPR016132 Phytochrome chromophore attachment domain CH48_3567 IPR001633 EAL domain CH48_3567 IPR029016 GAF-like domain superfamily CH48_3567 IPR013515 Phytochrome, central region CH48_357 IPR004680 Citrate transporter-like domain CH48_3574 IPR036259 MFS transporter superfamily CH48_3574 IPR020846 Major facilitator superfamily domain CH48_3574 IPR011701 Major facilitator superfamily CH48_3575 IPR000847 Transcription regulator HTH, LysR CH48_3575 IPR005119 LysR, substrate-binding CH48_3575 IPR037417 HTH-type transcriptional regulator SyrM, PBP2 domain CH48_3575 IPR036390 Winged helix DNA-binding domain superfamily CH48_3575 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_3576 IPR003399 Mce/MlaD CH48_3577 IPR007498 Intermembrane transport protein PqiA-like CH48_3577 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type CH48_3577 IPR011031 Multihaem cytochrome CH48_3578 IPR029016 GAF-like domain superfamily CH48_3578 IPR003018 GAF domain CH48_3578 IPR000614 Free Met sulfoxide reductase conserved site CH48_3579 IPR023529 RNA chaperone ProQ CH48_3579 IPR035236 RNA chaperone ProQ, C-terminal CH48_3579 IPR036442 ProQ/FinO domain superfamily CH48_3579 IPR016103 ProQ/FinO domain CH48_358 IPR000560 Histidine phosphatase superfamily, clade-2 CH48_358 IPR033379 Histidine acid phosphatase active site CH48_358 IPR029033 Histidine phosphatase superfamily CH48_3580 IPR029045 ClpP/crotonase-like domain superfamily CH48_3580 IPR001478 PDZ domain CH48_3580 IPR036034 PDZ superfamily CH48_3580 IPR004447 C-terminal-processing peptidase S41A CH48_3580 IPR040573 Tail specific protease, N-terminal domain CH48_3580 IPR005151 Tail specific protease CH48_3580 IPR020992 Tail specific protease, C-terminal CH48_3581 IPR022919 Peptidase M48, protease HtpX, putative CH48_3581 IPR001915 Peptidase M48 CH48_3582 IPR020846 Major facilitator superfamily domain CH48_3582 IPR011701 Major facilitator superfamily CH48_3582 IPR036259 MFS transporter superfamily CH48_3583 IPR027946 Oligogalacturonate lyase domain CH48_3583 IPR015943 WD40/YVTN repeat-like-containing domain superfamily CH48_3584 IPR029016 GAF-like domain superfamily CH48_3584 IPR005471 Transcription regulator IclR, N-terminal CH48_3584 IPR011991 ArsR-like helix-turn-helix domain CH48_3584 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_3584 IPR036390 Winged helix DNA-binding domain superfamily CH48_3584 IPR014757 Transcription regulator IclR, C-terminal CH48_3585 IPR036366 PGBD superfamily CH48_3585 IPR036365 PGBD-like superfamily CH48_3585 IPR002502 N-acetylmuramoyl-L-alanine amidase domain CH48_3585 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily CH48_3587 IPR007404 LexA-binding, inner membrane-associated putative hydrolase CH48_3587 IPR016956 Inner membrane protein YdjM CH48_3588 IPR009331 Oligogalacturonate-specific porin CH48_3589 IPR006059 Bacterial extracellular solute-binding protein CH48_359 IPR000843 LacI-type HTH domain CH48_359 IPR028082 Periplasmic binding protein-like I CH48_359 IPR006377 Catabolite control protein A CH48_359 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CH48_3590 IPR005116 Transport-associated OB, type 1 CH48_3590 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_3590 IPR008995 Molybdate/tungstate binding, C-terminal CH48_3590 IPR003439 ABC transporter-like CH48_3590 IPR017871 ABC transporter, conserved site CH48_3590 IPR003593 AAA+ ATPase domain CH48_3590 IPR040582 MalK, OB fold domain CH48_3591 IPR035906 MetI-like superfamily CH48_3591 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CH48_3592 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CH48_3592 IPR035906 MetI-like superfamily CH48_3593 IPR010702 Periplasmic pectate lyase CH48_3594 IPR002347 Short-chain dehydrogenase/reductase SDR CH48_3594 IPR020904 Short-chain dehydrogenase/reductase, conserved site CH48_3594 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase CH48_3594 IPR036291 NAD(P)-binding domain superfamily CH48_3595 IPR014710 RmlC-like jelly roll fold CH48_3595 IPR007045 5-keto 4-deoxyuronate isomerase CH48_3595 IPR011051 RmlC-like cupin domain superfamily CH48_3595 IPR021120 KduI/IolB isomerase CH48_3595 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal CH48_3596 IPR025499 Pectin degradation protein KdgF CH48_3596 IPR014710 RmlC-like jelly roll fold CH48_3596 IPR011051 RmlC-like cupin domain superfamily CH48_3596 IPR013096 Cupin 2, conserved barrel CH48_3597 IPR006439 HAD hydrolase, subfamily IA CH48_3597 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CH48_3597 IPR023214 HAD superfamily CH48_3597 IPR041492 Haloacid dehalogenase-like hydrolase CH48_3597 IPR036412 HAD-like superfamily CH48_3598 IPR025229 YniB-like protein CH48_3599 IPR003702 Acetyl-CoA hydrolase/transferase CH48_3599 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily CH48_3599 IPR037171 NagB/RpiA transferase-like CH48_3599 IPR017821 Succinate CoA transferase CH48_3599 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain CH48_360 IPR036095 PTS system IIB component-like superfamily CH48_360 IPR003501 Phosphotransferase system, EIIB component, type 2/3 CH48_360 IPR013012 Phosphotransferase system, EIIB component, type 3 CH48_3600 IPR005119 LysR, substrate-binding CH48_3600 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_3600 IPR000847 Transcription regulator HTH, LysR CH48_3600 IPR036390 Winged helix DNA-binding domain superfamily CH48_3601 IPR001753 Enoyl-CoA hydratase/isomerase CH48_3601 IPR014748 Enoyl-CoA hydratase, C-terminal CH48_3601 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CH48_3601 IPR029045 ClpP/crotonase-like domain superfamily CH48_3602 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_3602 IPR005129 SIMIBI class G3E GTPase, ArgK/MeaB CH48_3603 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic CH48_3603 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic CH48_3603 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic CH48_3603 IPR036724 Cobalamin-binding domain superfamily CH48_3603 IPR006158 Cobalamin (vitamin B12)-binding domain CH48_3603 IPR006159 Methylmalonyl-CoA mutase, C-terminal CH48_3605 IPR001626 ABC transporter, TroCD-like CH48_3605 IPR037294 ABC transporter, BtuC-like CH48_3606 IPR037294 ABC transporter, BtuC-like CH48_3606 IPR001626 ABC transporter, TroCD-like CH48_3607 IPR003439 ABC transporter-like CH48_3607 IPR003593 AAA+ ATPase domain CH48_3607 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_3607 IPR017871 ABC transporter, conserved site CH48_3608 IPR006128 Adhesion lipoprotein CH48_3608 IPR006127 Periplasmic solute binding protein, ZnuA-like CH48_3608 IPR006129 Adhesin B CH48_3609 IPR023946 Endo-type membrane-bound lytic murein transglycosylase A CH48_3609 IPR023346 Lysozyme-like domain superfamily CH48_3609 IPR000189 Prokaryotic transglycosylase, active site CH48_3609 IPR008258 Transglycosylase SLT domain 1 CH48_361 IPR004501 Phosphotransferase system, EIIC component, type 3 CH48_361 IPR003352 Phosphotransferase system, EIIC CH48_361 IPR004796 Phosphotransferase system, cellobiose-type IIC component CH48_3610 IPR002771 Multiple antibiotic resistance (MarC)-related CH48_3615 IPR007563 Protein of unknown function DUF554 CH48_3616 IPR025309 KTSC domain CH48_3617 IPR004095 TGS CH48_3617 IPR012675 Beta-grasp domain superfamily CH48_3617 IPR036621 Anticodon-binding domain superfamily CH48_3617 IPR004154 Anticodon-binding CH48_3617 IPR006195 Aminoacyl-tRNA synthetase, class II CH48_3617 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) CH48_3617 IPR002320 Threonine-tRNA ligase, class IIa CH48_3617 IPR012676 TGS-like CH48_3617 IPR012947 Threonyl/alanyl tRNA synthetase, SAD CH48_3617 IPR033728 Threonine-tRNA ligase catalytic core domain CH48_3617 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily CH48_3618 IPR019815 Translation initiation factor 3, C-terminal CH48_3618 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily CH48_3618 IPR019814 Translation initiation factor 3, N-terminal CH48_3618 IPR019813 Translation initiation factor 3, conserved site CH48_3618 IPR001288 Translation initiation factor 3 CH48_3618 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily CH48_3619 IPR021137 Ribosomal protein L35 CH48_3619 IPR018265 Ribosomal protein L35, conserved site CH48_3619 IPR001706 Ribosomal protein L35, non-mitochondrial CH48_3619 IPR037229 Ribosomal protein L35 superfamily CH48_362 IPR001360 Glycoside hydrolase family 1 CH48_362 IPR018120 Glycoside hydrolase family 1, active site CH48_362 IPR017853 Glycoside hydrolase superfamily CH48_3620 IPR005813 Ribosomal protein L20 CH48_3620 IPR035566 Ribosomal protein L20, C-terminal CH48_3621 IPR006195 Aminoacyl-tRNA synthetase, class II CH48_3621 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm CH48_3621 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial CH48_3621 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal CH48_3621 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit CH48_3621 IPR002319 Phenylalanyl-tRNA synthetase CH48_3622 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily CH48_3622 IPR012340 Nucleic acid-binding, OB-fold CH48_3622 IPR009061 Putative DNA-binding domain superfamily CH48_3622 IPR005147 tRNA synthetase, B5-domain CH48_3622 IPR002547 tRNA-binding domain CH48_3622 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 CH48_3622 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain CH48_3622 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit CH48_3622 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain CH48_3622 IPR005121 Ferrodoxin-fold anticodon-binding domain CH48_3622 IPR005146 B3/B4 tRNA-binding domain CH48_3623 IPR020816 Histone-like DNA-binding protein, conserved site CH48_3623 IPR000119 Histone-like DNA-binding protein CH48_3623 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily CH48_3623 IPR005684 Integration host factor, alpha subunit CH48_3624 IPR007829 TM2 domain CH48_3626 IPR037294 ABC transporter, BtuC-like CH48_3626 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC CH48_3626 IPR000522 ABC transporter, permease protein, BtuC-like CH48_3627 IPR036249 Thioredoxin-like superfamily CH48_3627 IPR029760 Glutathione peroxidase conserved site CH48_3627 IPR029759 Glutathione peroxidase active site CH48_3627 IPR000889 Glutathione peroxidase CH48_3627 IPR033674 Thioredoxin/glutathione peroxidase BtuE CH48_3628 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_3628 IPR003439 ABC transporter-like CH48_3628 IPR017871 ABC transporter, conserved site CH48_3628 IPR003593 AAA+ ATPase domain CH48_3628 IPR023693 ABC transporter, vitamin B12, BtuD CH48_3629 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CH48_3629 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CH48_3629 IPR015424 Pyridoxal phosphate-dependent transferase CH48_3629 IPR022850 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase, ArnB CH48_3629 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CH48_363 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit CH48_363 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily CH48_3630 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase CH48_3630 IPR029044 Nucleotide-diphospho-sugar transferases CH48_3630 IPR001173 Glycosyltransferase 2-like CH48_3631 IPR021168 Bifunctional polymyxin resistance protein, ArnA CH48_3631 IPR036291 NAD(P)-binding domain superfamily CH48_3631 IPR001509 NAD-dependent epimerase/dehydratase CH48_3631 IPR005793 Formyl transferase, C-terminal CH48_3631 IPR002376 Formyl transferase, N-terminal CH48_3631 IPR036477 Formyl transferase, N-terminal domain superfamily CH48_3631 IPR011034 Formyl transferase-like, C-terminal domain superfamily CH48_3632 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CH48_3632 IPR023557 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD, probable CH48_3632 IPR002509 NodB homology domain CH48_3633 IPR003342 Glycosyl transferase family 39/83 CH48_3633 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase CH48_3634 IPR000620 EamA domain CH48_3634 IPR022883 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase, subunit ArnE CH48_3634 IPR000390 Small multidrug resistance protein family CH48_3635 IPR022832 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF CH48_3635 IPR000390 Small multidrug resistance protein family CH48_3636 IPR000064 Endopeptidase, NLPC/P60 domain CH48_3636 IPR038765 Papain-like cysteine peptidase superfamily CH48_3637 IPR004562 Lipoyltransferase/lipoate-protein ligase CH48_3637 IPR023741 Lipoate-protein ligase A CH48_3637 IPR019491 Lipoate protein ligase, C-terminal CH48_3637 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain CH48_3638 IPR003846 Protein adenylyltransferase SelO CH48_3639 IPR002491 ABC transporter periplasmic binding domain CH48_3640 IPR007845 Haemin-degrading HemS/ChuX domain CH48_3641 IPR039426 Vitamin B12 transporter BtuB-like CH48_3641 IPR012910 TonB-dependent receptor, plug domain CH48_3641 IPR011276 TonB-dependent haem/haemoglobin receptor CH48_3641 IPR037066 TonB-dependent receptor, plug domain superfamily CH48_3641 IPR000531 TonB-dependent receptor-like, beta-barrel CH48_3641 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor CH48_3641 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CH48_3641 IPR010916 TonB box, conserved site CH48_3642 IPR006219 DHAP synthase, class 1 CH48_3642 IPR013785 Aldolase-type TIM barrel CH48_3642 IPR006218 DAHP synthetase I/KDSA CH48_3643 IPR008917 Transcription factor, Skn-1-like, DNA-binding domain superfamily CH48_3643 IPR005177 Bifunctional kinase-pyrophosphorylase CH48_3643 IPR026530 Phosphoenolpyruvate synthase regulatory protein CH48_3645 IPR040442 Pyruvate kinase-like domain superfamily CH48_3645 IPR013815 ATP-grasp fold, subdomain 1 CH48_3645 IPR008279 PEP-utilising enzyme, mobile domain CH48_3645 IPR006319 Phosphoenolpyruvate synthase CH48_3645 IPR018274 PEP-utilising enzyme, active site CH48_3645 IPR000121 PEP-utilising enzyme, C-terminal CH48_3645 IPR023151 PEP-utilising enzyme, conserved site CH48_3645 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CH48_3645 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding CH48_3645 IPR036637 Phosphohistidine domain superfamily CH48_3646 IPR002549 Transmembrane protein TqsA-like CH48_3647 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CH48_3647 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CH48_3647 IPR016166 FAD-binding domain, PCMH-type CH48_3647 IPR016164 FAD-linked oxidase-like, C-terminal CH48_3647 IPR036318 FAD-binding, type PCMH-like superfamily CH48_3647 IPR009051 Alpha-helical ferredoxin CH48_3647 IPR004113 FAD-linked oxidase, C-terminal CH48_3647 IPR006094 FAD linked oxidase, N-terminal CH48_3649 IPR030863 1,4-dihydroxy-2-naphthoyl-CoA hydrolase, MenI CH48_3649 IPR006683 Thioesterase domain CH48_3649 IPR029069 HotDog domain superfamily CH48_3649 IPR003736 Phenylacetic acid degradation-related domain CH48_365 IPR015942 Asp/Glu/hydantoin racemase CH48_365 IPR001920 Asp/Glu racemase CH48_365 IPR004380 Aspartate racemase CH48_365 IPR018187 Asp/Glu racemase, active site 1 CH48_365 IPR033134 Asp/Glu racemase, active site 2 CH48_3650 IPR017870 FeS cluster insertion, C-terminal, conserved site CH48_3650 IPR035903 HesB-like domain superfamily CH48_3650 IPR000361 FeS cluster biogenesis CH48_3650 IPR011298 FeS assembly scaffold SufA CH48_3650 IPR016092 FeS cluster insertion protein CH48_3651 IPR010231 SUF system FeS cluster assembly, SufB CH48_3651 IPR037284 SUF system FeS cluster assembly, SufBD superfamily CH48_3651 IPR000825 SUF system FeS cluster assembly, SufBD CH48_3652 IPR010230 FeS cluster assembly SUF system, ATPase SufC CH48_3652 IPR003439 ABC transporter-like CH48_3652 IPR003593 AAA+ ATPase domain CH48_3652 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_3652 IPR017871 ABC transporter, conserved site CH48_3653 IPR011542 SUF system FeS cluster assembly, SufD CH48_3653 IPR000825 SUF system FeS cluster assembly, SufBD CH48_3653 IPR037284 SUF system FeS cluster assembly, SufBD superfamily CH48_3654 IPR015424 Pyridoxal phosphate-dependent transferase CH48_3654 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CH48_3654 IPR010970 Cysteine desulfurase, SufS CH48_3654 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CH48_3654 IPR000192 Aminotransferase class V domain CH48_3654 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CH48_3655 IPR023939 Cysteine desulfuration protein SufE CH48_3655 IPR003808 Fe-S metabolism associated domain, SufE-like CH48_3656 IPR038063 L,D-transpeptidase catalytic domain-like CH48_3656 IPR018392 LysM domain CH48_3656 IPR005490 L,D-transpeptidase catalytic domain CH48_3656 IPR041597 L,D-transpeptidase C-terminal domain CH48_3657 IPR006817 Lipoprotein leucine-zipper CH48_3657 IPR016367 Murein-lipoprotein CH48_3658 IPR011037 Pyruvate kinase-like, insert domain superfamily CH48_3658 IPR015793 Pyruvate kinase, barrel CH48_3658 IPR040442 Pyruvate kinase-like domain superfamily CH48_3658 IPR001697 Pyruvate kinase CH48_3658 IPR018209 Pyruvate kinase, active site CH48_3658 IPR015795 Pyruvate kinase, C-terminal CH48_3658 IPR015806 Pyruvate kinase, insert domain superfamily CH48_3658 IPR036918 Pyruvate kinase, C-terminal domain superfamily CH48_3658 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CH48_366 IPR029787 Nucleotide cyclase CH48_366 IPR000160 GGDEF domain CH48_366 IPR033416 Periplasmic sensor domain CHASE7 CH48_3662 IPR022913 Multidrug resistance protein MdtK CH48_3662 IPR002528 Multi antimicrobial extrusion protein CH48_3663 IPR001783 Lumazine-binding protein CH48_3663 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily CH48_3663 IPR026017 Lumazine-binding domain CH48_3663 IPR017938 Riboflavin synthase-like beta-barrel CH48_3664 IPR003333 Mycolic acid cyclopropane synthase CH48_3664 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH48_3665 IPR004812 Drug resistance transporter Bcr/CmlA subfamily CH48_3665 IPR011701 Major facilitator superfamily CH48_3665 IPR020846 Major facilitator superfamily domain CH48_3665 IPR036259 MFS transporter superfamily CH48_3666 IPR005119 LysR, substrate-binding CH48_3666 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_3666 IPR000847 Transcription regulator HTH, LysR CH48_3666 IPR036390 Winged helix DNA-binding domain superfamily CH48_3667 IPR023588 Transcription regulator HTH, PurR CH48_3667 IPR028082 Periplasmic binding protein-like I CH48_3667 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CH48_3667 IPR000843 LacI-type HTH domain CH48_3669 IPR001189 Manganese/iron superoxide dismutase CH48_3669 IPR019833 Manganese/iron superoxide dismutase, binding site CH48_3669 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily CH48_3669 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily CH48_3669 IPR019832 Manganese/iron superoxide dismutase, C-terminal CH48_3669 IPR019831 Manganese/iron superoxide dismutase, N-terminal CH48_367 IPR014030 Beta-ketoacyl synthase, N-terminal CH48_367 IPR018201 Beta-ketoacyl synthase, active site CH48_367 IPR000794 Beta-ketoacyl synthase CH48_367 IPR016039 Thiolase-like CH48_367 IPR014031 Beta-ketoacyl synthase, C-terminal CH48_367 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CH48_3670 IPR000064 Endopeptidase, NLPC/P60 domain CH48_3670 IPR038765 Papain-like cysteine peptidase superfamily CH48_3671 IPR033658 Glutaredoxin, PICOT-like CH48_3671 IPR014434 Monothiol glutaredoxin CH48_3671 IPR002109 Glutaredoxin CH48_3671 IPR036249 Thioredoxin-like superfamily CH48_3671 IPR004480 Monothiol glutaredoxin-related CH48_3672 IPR005987 Ribonuclease T CH48_3672 IPR012337 Ribonuclease H-like superfamily CH48_3672 IPR036397 Ribonuclease H superfamily CH48_3672 IPR013520 Exonuclease, RNase T/DNA polymerase III CH48_3673 IPR004361 Glyoxalase I CH48_3673 IPR037523 Vicinal oxygen chelate (VOC) domain CH48_3673 IPR018146 Glyoxalase I, conserved site CH48_3673 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CH48_3673 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CH48_3674 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal CH48_3674 IPR013785 Aldolase-type TIM barrel CH48_3675 IPR001647 DNA-binding HTH domain, TetR-type CH48_3675 IPR009057 Homeobox-like domain superfamily CH48_3675 IPR011075 Tetracyclin repressor-like, C-terminal domain CH48_3675 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CH48_3676 IPR040423 Phosphoethanolamine transferase CH48_3676 IPR012549 Phosphoethanolamine transferase, N-terminal CH48_3676 IPR017850 Alkaline-phosphatase-like, core domain superfamily CH48_3676 IPR000917 Sulfatase, N-terminal CH48_3677 IPR010710 Protein of unknown function DUF1289 CH48_3678 IPR023210 NADP-dependent oxidoreductase domain CH48_3678 IPR020471 Aldo/keto reductase CH48_3678 IPR036812 NADP-dependent oxidoreductase domain superfamily CH48_3679 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein CH48_368 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal CH48_368 IPR008471 MnmC-like methyltransferase CH48_368 IPR036188 FAD/NAD(P)-binding domain superfamily CH48_368 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC CH48_368 IPR006076 FAD dependent oxidoreductase CH48_3680 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CH48_3680 IPR006143 RND efflux pump, membrane fusion protein CH48_3681 IPR012451 Protein of unknown function DUF1656 CH48_3682 IPR023071 Transcriptional regulator, SlyA CH48_3682 IPR000835 MarR-type HTH domain CH48_3682 IPR036390 Winged helix DNA-binding domain superfamily CH48_3682 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_3682 IPR023187 Transcriptional regulator MarR-type, conserved site CH48_3683 IPR008816 Glycine zipper 2TM domain CH48_3685 IPR005338 Anhydro-N-acetylmuramic acid kinase CH48_3686 IPR018660 C-type lysozyme inhibitor CH48_3686 IPR036328 C-type lysozyme inhibitor superfamily CH48_3687 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal CH48_3687 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative CH48_3687 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site CH48_3687 IPR000659 Pyridoxamine 5'-phosphate oxidase CH48_3687 IPR012349 FMN-binding split barrel CH48_3688 IPR002307 Tyrosine-tRNA ligase CH48_3688 IPR036986 RNA-binding S4 domain superfamily CH48_3688 IPR002942 RNA-binding S4 domain CH48_3688 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH48_3688 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 CH48_3688 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CH48_3688 IPR024088 Tyrosine-tRNA ligase, bacterial-type CH48_3688 IPR002305 Aminoacyl-tRNA synthetase, class Ic CH48_3689 IPR023685 Pyridoxal kinase PdxY CH48_3689 IPR029056 Ribokinase-like CH48_3689 IPR004625 Pyridoxine kinase CH48_3689 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase CH48_369 IPR014987 Uncharacterised protein family YfcL CH48_3690 IPR004046 Glutathione S-transferase, C-terminal CH48_3690 IPR004045 Glutathione S-transferase, N-terminal CH48_3690 IPR040079 Glutathione Transferase family CH48_3690 IPR036249 Thioredoxin-like superfamily CH48_3690 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CH48_3690 IPR010987 Glutathione S-transferase, C-terminal-like CH48_3691 IPR020317 Uncharacterised protein family YjbD CH48_3692 IPR006977 Yip1 domain CH48_3694 IPR023517 Amino acid/peptide transporter family, dipeptide and tripeptide permease A CH48_3694 IPR005279 Dipeptide/tripeptide permease CH48_3694 IPR036259 MFS transporter superfamily CH48_3694 IPR000109 Proton-dependent oligopeptide transporter family CH48_3694 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site CH48_3695 IPR005119 LysR, substrate-binding CH48_3695 IPR036390 Winged helix DNA-binding domain superfamily CH48_3695 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_3695 IPR000847 Transcription regulator HTH, LysR CH48_3699 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_3699 IPR017871 ABC transporter, conserved site CH48_3699 IPR003439 ABC transporter-like CH48_3699 IPR003593 AAA+ ATPase domain CH48_370 IPR007411 Elongation factor P hydroxylase CH48_3700 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_3700 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CH48_3700 IPR003439 ABC transporter-like CH48_3700 IPR003593 AAA+ ATPase domain CH48_3701 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CH48_3701 IPR035906 MetI-like superfamily CH48_3701 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CH48_3702 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CH48_3702 IPR035906 MetI-like superfamily CH48_3703 IPR000914 Solute-binding protein family 5 domain CH48_3703 IPR023765 Solute-binding protein family 5, conserved site CH48_3703 IPR039424 Solute-binding protein family 5 CH48_3703 IPR030678 Peptide/nickel binding protein, MppA-type CH48_3704 IPR003898 Bordetella pertussis toxin A CH48_3706 IPR002197 DNA binding HTH domain, Fis-type CH48_3706 IPR009057 Homeobox-like domain superfamily CH48_3706 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CH48_3706 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_3706 IPR025944 Sigma-54 interaction domain, conserved site CH48_3706 IPR002078 RNA polymerase sigma factor 54 interaction domain CH48_3706 IPR003593 AAA+ ATPase domain CH48_3706 IPR014317 Transcription activator PspF CH48_3707 IPR007157 PspA/IM30 CH48_3707 IPR014319 Phage shock protein, PspA CH48_3708 IPR009554 Phage shock protein B CH48_3709 IPR014320 Phage shock protein, PspC CH48_3709 IPR007168 Phage shock protein, PspC, N-terminal CH48_371 IPR002781 Transmembrane protein TauE-like CH48_3711 IPR007413 Protein of unknown function DUF463, YcjX-like protein CH48_3712 IPR021147 Protein of unknown function DUF697 CH48_3712 IPR006507 Uncharacterised protein family UPF0283 CH48_3715 IPR025944 Sigma-54 interaction domain, conserved site CH48_3715 IPR002078 RNA polymerase sigma factor 54 interaction domain CH48_3715 IPR035965 PAS domain superfamily CH48_3715 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CH48_3715 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CH48_3715 IPR000014 PAS domain CH48_3715 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_3715 IPR030828 TyrR family, helix-turn-helix domain CH48_3715 IPR009057 Homeobox-like domain superfamily CH48_3715 IPR002912 ACT domain CH48_3715 IPR003593 AAA+ ATPase domain CH48_3716 IPR018219 Thiol peroxidase conserved site CH48_3716 IPR002065 Thiol peroxidase Tpx CH48_3716 IPR013766 Thioredoxin domain CH48_3716 IPR036249 Thioredoxin-like superfamily CH48_3716 IPR013740 Redoxin CH48_3717 IPR000834 Peptidase M14, carboxypeptidase A CH48_3718 IPR034603 Dipeptide epimerase CH48_3718 IPR036849 Enolase-like, C-terminal domain superfamily CH48_3718 IPR029065 Enolase C-terminal domain-like CH48_3718 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CH48_3718 IPR029017 Enolase-like, N-terminal CH48_3718 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site CH48_3718 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CH48_3719 IPR039424 Solute-binding protein family 5 CH48_3719 IPR023765 Solute-binding protein family 5, conserved site CH48_3719 IPR000914 Solute-binding protein family 5 domain CH48_3719 IPR030678 Peptide/nickel binding protein, MppA-type CH48_372 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase CH48_372 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily CH48_3720 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB CH48_3720 IPR023714 Zinc transport protein ZntB CH48_3721 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH48_3721 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase CH48_3721 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal CH48_3721 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type CH48_3722 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily CH48_3722 IPR000909 Phosphatidylinositol-specific phospholipase C, X domain CH48_3723 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal CH48_3723 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain CH48_3723 IPR011895 Pyruvate-flavodoxin oxidoreductase CH48_3723 IPR037112 Pyruvate-flavodoxin oxidoreductase, EKR domain superfamily CH48_3723 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain CH48_3723 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II CH48_3723 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CH48_3723 IPR029061 Thiamin diphosphate-binding fold CH48_3723 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II CH48_3723 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CH48_3723 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CH48_3723 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain CH48_3724 IPR000390 Small multidrug resistance protein family CH48_3725 IPR003416 MgtC/SapB/SrpB/YhiD family CH48_3726 IPR005590 Protein of unknown function DUF333 CH48_3727 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CH48_3727 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CH48_3727 IPR036291 NAD(P)-binding domain superfamily CH48_3727 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CH48_3727 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CH48_3728 IPR021730 Dicarboxylate transport CH48_3729 IPR025985 YnbE-like lipoprotein CH48_373 IPR000453 Chorismate synthase CH48_373 IPR035904 Chorismate synthase AroC superfamily CH48_373 IPR020541 Chorismate synthase, conserved site CH48_3730 IPR008309 Uncharacterised conserved protein UCP025560 CH48_3731 IPR029039 Flavoprotein-like superfamily CH48_3731 IPR003680 Flavodoxin-like fold CH48_3731 IPR023048 NADH-azoreductase, FMN-dependent CH48_3732 IPR001650 Helicase, C-terminal CH48_3732 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_3732 IPR024590 RNA helicase HrpA, C-terminal CH48_3732 IPR014001 Helicase superfamily 1/2, ATP-binding domain CH48_3732 IPR007502 Helicase-associated domain CH48_3732 IPR010222 RNA helicase HrpA CH48_3732 IPR011709 Domain of unknown function DUF1605 CH48_3732 IPR011545 DEAD/DEAH box helicase domain CH48_3732 IPR003593 AAA+ ATPase domain CH48_3735 IPR001254 Serine proteases, trypsin domain CH48_3735 IPR018114 Serine proteases, trypsin family, histidine active site CH48_3735 IPR009003 Peptidase S1, PA clan CH48_3735 IPR008256 Peptidase S1B CH48_3735 IPR033116 Serine proteases, trypsin family, serine active site CH48_3737 IPR001333 Peptidase M32, carboxypeptidase Taq CH48_3738 IPR005467 Histidine kinase domain CH48_3738 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH48_3738 IPR003594 Histidine kinase/HSP90-like ATPase CH48_3738 IPR003660 HAMP domain CH48_3738 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CH48_3738 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CH48_3738 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CH48_3739 IPR016032 Signal transduction response regulator, C-terminal effector CH48_3739 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_3739 IPR001789 Signal transduction response regulator, receiver domain CH48_3739 IPR011006 CheY-like superfamily CH48_3739 IPR001867 OmpR/PhoB-type DNA-binding domain CH48_3739 IPR039420 Transcriptional regulatory protein WalR-like CH48_374 IPR007848 Methyltransferase small domain CH48_374 IPR004556 Methyltransferase HemK-like CH48_374 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase CH48_374 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH48_374 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CH48_3741 IPR004754 Amino acid antiporter CH48_3741 IPR002293 Amino acid/polyamine transporter I CH48_3742 IPR010854 Domain of unknown function DUF1471 CH48_3742 IPR025543 Dodecin-like CH48_3742 IPR025539 YdgH protein CH48_3742 IPR036275 YdgH-like superfamily CH48_3743 IPR036291 NAD(P)-binding domain superfamily CH48_3743 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CH48_3743 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal CH48_3743 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 CH48_3743 IPR026255 NAD(P) transhydrogenase, alpha subunit CH48_3743 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal CH48_3743 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 CH48_3744 IPR012136 NADP transhydrogenase, beta subunit CH48_3744 IPR029035 DHS-like NAD/FAD-binding domain superfamily CH48_3744 IPR034300 NADP transhydrogenase beta-like domain CH48_3745 IPR006016 UspA CH48_3746 IPR036390 Winged helix DNA-binding domain superfamily CH48_3746 IPR018490 Cyclic nucleotide-binding-like CH48_3746 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_3746 IPR018335 Transcription regulator HTH, Crp-type, conserved site CH48_3746 IPR014710 RmlC-like jelly roll fold CH48_3746 IPR012318 Crp-type HTH domain CH48_3746 IPR000595 Cyclic nucleotide-binding domain CH48_3747 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain CH48_3747 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily CH48_3747 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_3747 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site CH48_3747 IPR023546 Methylated-DNA--protein-cysteine methyltransferase CH48_3747 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain CH48_3747 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding CH48_3750 IPR011256 Regulatory factor, effector binding domain superfamily CH48_3750 IPR029442 GyrI-like small molecule binding domain CH48_3750 IPR010499 Bacterial transcription activator, effector binding CH48_3750 IPR024911 DNA gyrase inhibitor GyrI CH48_3751 IPR020904 Short-chain dehydrogenase/reductase, conserved site CH48_3751 IPR036291 NAD(P)-binding domain superfamily CH48_3751 IPR002347 Short-chain dehydrogenase/reductase SDR CH48_3752 IPR018299 Alkaline phosphatase, active site CH48_3752 IPR017850 Alkaline-phosphatase-like, core domain superfamily CH48_3752 IPR001952 Alkaline phosphatase CH48_3753 IPR011877 Ribokinase CH48_3753 IPR002139 Ribokinase/fructokinase CH48_3753 IPR029056 Ribokinase-like CH48_3753 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CH48_3753 IPR011611 Carbohydrate kinase PfkB CH48_3755 IPR005275 L-fucose permease FucP CH48_3755 IPR011701 Major facilitator superfamily CH48_3755 IPR020846 Major facilitator superfamily domain CH48_3755 IPR036259 MFS transporter superfamily CH48_3757 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CH48_3757 IPR006439 HAD hydrolase, subfamily IA CH48_3757 IPR036412 HAD-like superfamily CH48_3757 IPR041492 Haloacid dehalogenase-like hydrolase CH48_3757 IPR023214 HAD superfamily CH48_3757 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB CH48_3758 IPR004789 Acetolactate synthase, small subunit CH48_3758 IPR039557 AHAS, ACT domain CH48_3758 IPR002912 ACT domain CH48_3759 IPR029035 DHS-like NAD/FAD-binding domain superfamily CH48_3759 IPR039368 Acetolactate synthase large subunit, TPP binding domain CH48_3759 IPR029061 Thiamin diphosphate-binding fold CH48_3759 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CH48_3759 IPR012000 Thiamine pyrophosphate enzyme, central domain CH48_3759 IPR012846 Acetolactate synthase, large subunit, biosynthetic CH48_3759 IPR000399 TPP-binding enzyme, conserved site CH48_3759 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CH48_3761 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily CH48_3761 IPR002502 N-acetylmuramoyl-L-alanine amidase domain CH48_3761 IPR036365 PGBD-like superfamily CH48_3761 IPR036366 PGBD superfamily CH48_3766 IPR020846 Major facilitator superfamily domain CH48_3766 IPR000849 Sugar phosphate transporter CH48_3766 IPR011701 Major facilitator superfamily CH48_3766 IPR021159 Glycerate/sugar phosphate transporter, conserved site CH48_3766 IPR036259 MFS transporter superfamily CH48_3767 IPR020550 Inositol monophosphatase, conserved site CH48_3767 IPR022337 Inositol monophosphatase, SuhB CH48_3767 IPR000760 Inositol monophosphatase-like CH48_3767 IPR020583 Inositol monophosphatase, metal-binding site CH48_3767 IPR033942 Inositol monophosphatase CH48_3768 IPR000843 LacI-type HTH domain CH48_3768 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CH48_3768 IPR028082 Periplasmic binding protein-like I CH48_3769 IPR011271 AMP nucleosidase CH48_3769 IPR000845 Nucleoside phosphorylase domain CH48_3769 IPR018953 AMP nucleoside phosphorylase, N-terminal CH48_3769 IPR035994 Nucleoside phosphorylase superfamily CH48_3769 IPR037109 AMP nucleoside phosphorylase, N-terminal domain superfamily CH48_377 IPR022990 Uncharacterised protein family UPF0115 CH48_377 IPR036063 Smr domain superfamily CH48_377 IPR002625 Smr domain CH48_3770 IPR025296 Domain of unknown function DUF4158 CH48_3770 IPR002513 Tn3 transposase DDE domain CH48_3771 IPR006120 Resolvase, HTH domain CH48_3771 IPR006118 Recombinase, conserved site CH48_3771 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily CH48_3771 IPR006119 Resolvase, N-terminal catalytic domain CH48_3772 IPR040198 Fido domain-containing protein CH48_3772 IPR036597 Fido-like domain superfamily CH48_3772 IPR003812 Fido domain CH48_3772 IPR026287 Protein adenylyltransferase SoFic-like CH48_3772 IPR025758 Fic/DOC N-terminal CH48_3774 IPR000847 Transcription regulator HTH, LysR CH48_3774 IPR005119 LysR, substrate-binding CH48_3774 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_3774 IPR036390 Winged helix DNA-binding domain superfamily CH48_3776 IPR033199 Dimethylarginine dimethylaminohydrolase CH48_3777 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CH48_3777 IPR018313 Solute-binding protein family 3, conserved site CH48_3777 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter CH48_3778 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CH48_3778 IPR035906 MetI-like superfamily CH48_3778 IPR030199 Histidine transport system permease protein HisQ CH48_3778 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CH48_3779 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CH48_3779 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CH48_3779 IPR035906 MetI-like superfamily CH48_378 IPR004449 Phosphohistidine phosphatase SixA CH48_378 IPR029033 Histidine phosphatase superfamily CH48_378 IPR013078 Histidine phosphatase superfamily, clade-1 CH48_3780 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CH48_3780 IPR019888 Transcription regulator AsnC-type CH48_3780 IPR000485 AsnC-type HTH domain CH48_3780 IPR036390 Winged helix DNA-binding domain superfamily CH48_3780 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_3780 IPR011008 Dimeric alpha-beta barrel CH48_3780 IPR011991 ArsR-like helix-turn-helix domain CH48_3785 IPR010987 Glutathione S-transferase, C-terminal-like CH48_3785 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CH48_3785 IPR040079 Glutathione Transferase family CH48_3785 IPR004045 Glutathione S-transferase, N-terminal CH48_3785 IPR036249 Thioredoxin-like superfamily CH48_379 IPR036291 NAD(P)-binding domain superfamily CH48_379 IPR012802 Fatty oxidation complex, alpha subunit FadJ CH48_379 IPR001753 Enoyl-CoA hydratase/isomerase CH48_379 IPR029045 ClpP/crotonase-like domain superfamily CH48_379 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal CH48_379 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CH48_379 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site CH48_379 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding CH48_3792 IPR001775 GspD/PilQ family CH48_3792 IPR005644 NolW-like CH48_3792 IPR038591 NolW-like superfamily CH48_3792 IPR004846 Type II/III secretion system CH48_3792 IPR001775 GspD/PilQ family CH48_3792 IPR005644 NolW-like CH48_3792 IPR038591 NolW-like superfamily CH48_3792 IPR004846 Type II/III secretion system CH48_3792 IPR013356 Type II secretion system GspD CH48_3792 IPR004845 Type II secretion system GspD, conserved site CH48_3792 IPR013356 Type II secretion system GspD CH48_3792 IPR004845 Type II secretion system GspD, conserved site CH48_38 IPR010780 Protein of unknown function DUF1375 CH48_380 IPR020617 Thiolase, C-terminal CH48_380 IPR020610 Thiolase, active site CH48_380 IPR020613 Thiolase, conserved site CH48_380 IPR020616 Thiolase, N-terminal CH48_380 IPR012806 Acetyl-CoA C-acyltransferase FadI CH48_380 IPR002155 Thiolase CH48_380 IPR016039 Thiolase-like CH48_380 IPR020615 Thiolase, acyl-enzyme intermediate active site CH48_381 IPR035571 UPF0234-like, C-terminal CH48_381 IPR005272 Conserved hypothetical protein CHP00743 CH48_3817 IPR025543 Dodecin-like CH48_3817 IPR010854 Domain of unknown function DUF1471 CH48_3817 IPR036275 YdgH-like superfamily CH48_3818 IPR020904 Short-chain dehydrogenase/reductase, conserved site CH48_3818 IPR002347 Short-chain dehydrogenase/reductase SDR CH48_3818 IPR036291 NAD(P)-binding domain superfamily CH48_3819 IPR003844 Uncharacterised protein family UPF0060 CH48_382 IPR042117 OMPP1/FadL/TodX superfamily CH48_382 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) CH48_3821 IPR009700 Protein of unknown function DUF1283 CH48_3822 IPR010595 Protein of unknown function DUF1161 CH48_3824 IPR014743 Chloride channel, core CH48_3824 IPR023790 Chloride channel, voltage-gated, ClcB CH48_3824 IPR001807 Chloride channel, voltage gated CH48_3825 IPR004472 Dethiobiotin synthase BioD CH48_3825 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_3826 IPR000600 ROK family CH48_3826 IPR036390 Winged helix DNA-binding domain superfamily CH48_3826 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_3827 IPR036390 Winged helix DNA-binding domain superfamily CH48_3827 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_3827 IPR000847 Transcription regulator HTH, LysR CH48_3827 IPR005119 LysR, substrate-binding CH48_3828 IPR011701 Major facilitator superfamily CH48_3828 IPR036259 MFS transporter superfamily CH48_3828 IPR005829 Sugar transporter, conserved site CH48_3828 IPR020846 Major facilitator superfamily domain CH48_383 IPR007428 MlaA lipoprotein CH48_3830 IPR023650 Beta-lactamase, class-A active site CH48_3830 IPR000871 Beta-lactamase, class-A CH48_3830 IPR012338 Beta-lactamase/transpeptidase-like CH48_3831 IPR036384 Replication terminator Tus superfamily CH48_3831 IPR008865 DNA replication terminus site-binding protein CH48_3831 IPR036381 Replication terminator Tus, domain 1 CH48_3833 IPR005677 Fumarate hydratase, class II CH48_3833 IPR018951 Fumarase C, C-terminal CH48_3833 IPR020557 Fumarate lyase, conserved site CH48_3833 IPR024083 Fumarase/histidase, N-terminal CH48_3833 IPR022761 Fumarate lyase, N-terminal CH48_3833 IPR008948 L-Aspartase-like CH48_3833 IPR000362 Fumarate lyase family CH48_3834 IPR018050 Phosphomannose isomerase, type I, conserved site CH48_3834 IPR014710 RmlC-like jelly roll fold CH48_3834 IPR016305 Mannose-6-phosphate isomerase CH48_3834 IPR001250 Mannose-6-phosphate isomerase, type I CH48_3834 IPR011051 RmlC-like cupin domain superfamily CH48_3835 IPR010352 Protein of unknown function DUF945 CH48_3836 IPR011004 Trimeric LpxA-like superfamily CH48_3836 IPR001451 Hexapeptide repeat CH48_3836 IPR018357 Hexapeptide transferase, conserved site CH48_3837 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CH48_3837 IPR000843 LacI-type HTH domain CH48_3837 IPR001761 Periplasmic binding protein/LacI sugar binding domain CH48_3837 IPR028082 Periplasmic binding protein-like I CH48_3838 IPR013013 Phosphotransferase system, EIIC component, type 1 CH48_3838 IPR011301 PTS system, maltose/glucose-specific IIBC component CH48_3838 IPR036878 Glucose permease domain IIB CH48_3838 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component CH48_3838 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site CH48_3838 IPR001996 Phosphotransferase system, IIB component, type 1 CH48_3838 IPR003352 Phosphotransferase system, EIIC CH48_3839 IPR004839 Aminotransferase, class I/classII CH48_3839 IPR027619 Putative C-S lyase CH48_3839 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CH48_3839 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CH48_3839 IPR015424 Pyridoxal phosphate-dependent transferase CH48_384 IPR011990 Tetratricopeptide-like helical domain superfamily CH48_384 IPR013026 Tetratricopeptide repeat-containing domain CH48_384 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily CH48_384 IPR019734 Tetratricopeptide repeat CH48_384 IPR005616 CcmH/CycL/Ccl2/NrfF family CH48_3840 IPR006650 Adenosine/AMP deaminase active site CH48_3840 IPR006330 Adenosine/adenine deaminase CH48_3840 IPR032466 Metal-dependent hydrolase CH48_3840 IPR001365 Adenosine/AMP deaminase domain CH48_3840 IPR028893 Adenosine deaminase CH48_3841 IPR038770 Sodium/solute symporter superfamily CH48_3841 IPR016833 Putative sodium bile acid cotransporter CH48_3842 IPR004104 Oxidoreductase, C-terminal CH48_3842 IPR000683 Oxidoreductase, N-terminal CH48_3842 IPR036291 NAD(P)-binding domain superfamily CH48_3843 IPR020449 Transcription regulator HTH, AraC- type CH48_3843 IPR037923 Transcription regulator HTH-like CH48_3843 IPR003313 AraC-type arabinose-binding/dimerisation domain CH48_3843 IPR018062 HTH domain AraC-type, conserved site CH48_3843 IPR009057 Homeobox-like domain superfamily CH48_3843 IPR018060 DNA binding HTH domain, AraC-type CH48_3844 IPR001851 ABC transporter, permease CH48_3845 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_3845 IPR017917 ABC transporter, arabinose import, ATP-binding protein, AraG CH48_3845 IPR017871 ABC transporter, conserved site CH48_3845 IPR003439 ABC transporter-like CH48_3845 IPR003593 AAA+ ATPase domain CH48_3846 IPR028082 Periplasmic binding protein-like I CH48_3846 IPR026266 L-arabinose-binding periplasmic protein CH48_3846 IPR001761 Periplasmic binding protein/LacI sugar binding domain CH48_3847 IPR005929 Ribulokinase CH48_3847 IPR018485 Carbohydrate kinase, FGGY, C-terminal CH48_3848 IPR004216 L-fucose/L-arabinose isomerase, C-terminal CH48_3848 IPR009015 L-fucose isomerase, N-terminal/central domain superfamily CH48_3848 IPR003762 L-arabinose isomerase CH48_3848 IPR024664 L-arabinose isomerase, C-terminal CH48_3848 IPR038583 L-arabinose isomerase, N-terminal domain superfamily CH48_3849 IPR003395 RecF/RecN/SMC, N-terminal CH48_3849 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_3849 IPR001238 DNA-binding, RecF CH48_3849 IPR018078 DNA-binding, RecF, conserved site CH48_3849 IPR042174 DNA-binding RecF, domain 2 CH48_385 IPR013026 Tetratricopeptide repeat-containing domain CH48_385 IPR017560 Cytochrome c-type biogenesis protein CcmI CH48_385 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily CH48_385 IPR019734 Tetratricopeptide repeat CH48_385 IPR005616 CcmH/CycL/Ccl2/NrfF family CH48_385 IPR011990 Tetratricopeptide-like helical domain superfamily CH48_3850 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_3850 IPR039421 Type I protein exporter CH48_3850 IPR039395 Peptidase C39-like A CH48_3850 IPR005074 Peptidase C39, bacteriocin processing CH48_3850 IPR011527 ABC transporter type 1, transmembrane domain CH48_3850 IPR010132 ATPase, type I secretion system, HlyB CH48_3850 IPR017871 ABC transporter, conserved site CH48_3850 IPR003439 ABC transporter-like CH48_3850 IPR036640 ABC transporter type 1, transmembrane domain superfamily CH48_3850 IPR003593 AAA+ ATPase domain CH48_3851 IPR006144 Secretion protein HlyD, conserved site CH48_3851 IPR010129 Type I secretion membrane fusion protein, HlyD family CH48_3854 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site CH48_3854 IPR000559 Formate-tetrahydrofolate ligase, FTHFS CH48_3854 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_3855 IPR019690 Protein of unknown function DUF2569 CH48_3856 IPR003667 NqrDE/RnfAE CH48_3856 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA CH48_3857 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria CH48_3857 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CH48_3857 IPR011005 Dihydropteroate synthase-like CH48_3857 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CH48_3857 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB CH48_3857 IPR007202 4Fe-4S domain CH48_3858 IPR026902 RnfC Barrel sandwich hybrid domain CH48_3858 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily CH48_3858 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain CH48_3858 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC CH48_3858 IPR009051 Alpha-helical ferredoxin CH48_3858 IPR019554 Soluble ligand binding domain CH48_3858 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CH48_3858 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CH48_386 IPR013740 Redoxin CH48_386 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE CH48_386 IPR013766 Thioredoxin domain CH48_386 IPR036249 Thioredoxin-like superfamily CH48_386 IPR017937 Thioredoxin, conserved site CH48_3861 IPR011256 Regulatory factor, effector binding domain superfamily CH48_3861 IPR020449 Transcription regulator HTH, AraC- type CH48_3861 IPR018060 DNA binding HTH domain, AraC-type CH48_3861 IPR009057 Homeobox-like domain superfamily CH48_3861 IPR029442 GyrI-like small molecule binding domain CH48_3861 IPR018062 HTH domain AraC-type, conserved site CH48_3861 IPR010499 Bacterial transcription activator, effector binding CH48_3862 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D CH48_3862 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD CH48_3863 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG CH48_3863 IPR007329 FMN-binding CH48_3864 IPR010968 Ion-translocating oxidoreductase complex subunit E CH48_3864 IPR003667 NqrDE/RnfAE CH48_3865 IPR005759 Endonuclease III CH48_3865 IPR004035 Endonuclease III, iron-sulphur binding site CH48_3865 IPR000445 Helix-hairpin-helix motif CH48_3865 IPR003265 HhH-GPD domain CH48_3865 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif CH48_3865 IPR004036 Endonuclease III-like, conserved site-2 CH48_3865 IPR011257 DNA glycosylase CH48_3865 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal CH48_387 IPR002541 Cytochrome c assembly protein CH48_387 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal CH48_387 IPR003567 Cytochrome c-type biogenesis protein CH48_387 IPR003568 Cytochrome c-type biogenesis protein CcmF CH48_3871 IPR041953 YdeP, molybdopterin-binding oxidoreductase-like domain CH48_3871 IPR010046 Oxidoreductase alpha (molybdopterin) subunit CH48_3871 IPR037951 YdeP-like, MopB domain CH48_3871 IPR009010 Aspartate decarboxylase-like domain superfamily CH48_3871 IPR006656 Molybdopterin oxidoreductase CH48_3872 IPR004476 Ribonuclease II/ribonuclease R CH48_3872 IPR013223 Ribonuclease B, N-terminal OB domain CH48_3872 IPR011804 Ribonuclease II CH48_3872 IPR012340 Nucleic acid-binding, OB-fold CH48_3872 IPR001900 Ribonuclease II/R CH48_3872 IPR011129 Cold shock domain CH48_3872 IPR022966 Ribonuclease II/R, conserved site CH48_3872 IPR003029 S1 domain CH48_3873 IPR003706 CstA, N-terminal domain CH48_3873 IPR025299 CstA, C-terminal domain CH48_3874 IPR007423 Selenoprotein, putative CH48_3875 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase CH48_3875 IPR018225 Transaldolase, active site CH48_3875 IPR033919 Transaldolase/Fructose-6-phosphate aldolase, archaeal/bacterial CH48_3875 IPR001585 Transaldolase/Fructose-6-phosphate aldolase CH48_3875 IPR023001 Fructose-6-phosphate aldolase CH48_3875 IPR013785 Aldolase-type TIM barrel CH48_3876 IPR014036 DeoR C-terminal sensor domain CH48_3876 IPR037171 NagB/RpiA transferase-like CH48_3876 IPR001034 DeoR-type HTH domain CH48_3876 IPR018356 Transcription regulator, HTH DeoR-type, conserved site CH48_3876 IPR036390 Winged helix DNA-binding domain superfamily CH48_3876 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_3878 IPR036409 Class II aldolase/adducin N-terminal domain superfamily CH48_3878 IPR001303 Class II aldolase/adducin N-terminal CH48_3878 IPR004661 L-ribulose-5-phosphate 4-epimerase CH48_3878 IPR033748 L-ribulose-5-phosphate 4-epimerase AraD CH48_3879 IPR008816 Glycine zipper 2TM domain CH48_388 IPR036127 CcmE-like superfamily CH48_388 IPR004329 CcmE/CycJ protein CH48_3881 IPR001950 SUI1 domain CH48_3881 IPR036877 SUI1 domain superfamily CH48_3881 IPR005872 Archaeal/bacterial translation initiation factor SUI1 CH48_3882 IPR011060 Ribulose-phosphate binding barrel CH48_3882 IPR014732 Orotidine 5'-phosphate decarboxylase CH48_3882 IPR013785 Aldolase-type TIM barrel CH48_3882 IPR001754 Orotidine 5'-phosphate decarboxylase domain CH48_3882 IPR018089 Orotidine 5'-phosphate decarboxylase, active site CH48_3883 IPR036275 YdgH-like superfamily CH48_3883 IPR025543 Dodecin-like CH48_3883 IPR010854 Domain of unknown function DUF1471 CH48_3884 IPR004711 Benzoate transporter CH48_3885 IPR001387 Cro/C1-type helix-turn-helix domain CH48_3885 IPR013096 Cupin 2, conserved barrel CH48_3885 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CH48_3885 IPR014710 RmlC-like jelly roll fold CH48_3885 IPR011051 RmlC-like cupin domain superfamily CH48_3887 IPR030865 Lipopolysaccharide assembly protein B CH48_3887 IPR041166 LapB, rubredoxin metal binding domain CH48_3887 IPR013026 Tetratricopeptide repeat-containing domain CH48_3887 IPR019734 Tetratricopeptide repeat CH48_3887 IPR011990 Tetratricopeptide-like helical domain superfamily CH48_3888 IPR032906 Lipopolysaccharide assembly protein A CH48_3888 IPR010445 Lipopolysaccharide assembly protein A domain CH48_3889 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CH48_3889 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily CH48_389 IPR007078 Haem exporter protein D (CcmD) CH48_3890 IPR000926 GTP cyclohydrolase II, RibA CH48_3890 IPR036144 RibA-like superfamily CH48_3890 IPR032677 GTP cyclohydrolase II CH48_3892 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 CH48_3892 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CH48_3892 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain CH48_3892 IPR006249 Aconitase/Iron-responsive element-binding protein 2 CH48_3892 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain CH48_3892 IPR036008 Aconitase, iron-sulfur domain CH48_3892 IPR018136 Aconitase family, 4Fe-4S cluster binding site CH48_3894 IPR000847 Transcription regulator HTH, LysR CH48_3894 IPR036390 Winged helix DNA-binding domain superfamily CH48_3894 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_3894 IPR005119 LysR, substrate-binding CH48_3895 IPR034149 DNA topoisomerase 1, TOPRIM domain CH48_3895 IPR028612 DNA topoisomerase I, type IA CH48_3895 IPR006171 TOPRIM domain CH48_3895 IPR000380 DNA topoisomerase, type IA CH48_3895 IPR003601 DNA topoisomerase, type IA, domain 2 CH48_3895 IPR023406 DNA topoisomerase, type IA, active site CH48_3895 IPR005733 DNA topoisomerase I, bacterial-type CH48_3895 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type CH48_3895 IPR013498 DNA topoisomerase, type IA, zn finger CH48_3895 IPR003602 DNA topoisomerase, type IA, DNA-binding domain CH48_3895 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CH48_3895 IPR023405 DNA topoisomerase, type IA, core domain CH48_3895 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 CH48_3895 IPR013497 DNA topoisomerase, type IA, central CH48_3895 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CH48_3896 IPR038191 YciN superfamily CH48_3896 IPR019633 Protein of unknown function DUF2498 CH48_3897 IPR013703 Peptidase S49, N-terminal proteobacteria CH48_3897 IPR029045 ClpP/crotonase-like domain superfamily CH48_3897 IPR002142 Peptidase S49 CH48_3898 IPR036291 NAD(P)-binding domain superfamily CH48_3898 IPR020904 Short-chain dehydrogenase/reductase, conserved site CH48_3898 IPR002347 Short-chain dehydrogenase/reductase SDR CH48_3899 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain CH48_3899 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR CH48_3899 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_39 IPR029044 Nucleotide-diphospho-sugar transferases CH48_39 IPR001173 Glycosyltransferase 2-like CH48_39 IPR023725 Glucan biosynthesis glucosyltransferase H CH48_390 IPR002541 Cytochrome c assembly protein CH48_390 IPR003557 Cytochrome c-type biogenesis protein CcmC CH48_3901 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site CH48_3901 IPR020103 Pseudouridine synthase, catalytic domain superfamily CH48_3901 IPR002942 RNA-binding S4 domain CH48_3901 IPR036986 RNA-binding S4 domain superfamily CH48_3901 IPR006145 Pseudouridine synthase, RsuA/RluA CH48_3901 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F CH48_3902 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily CH48_3902 IPR006070 YrdC-like domain CH48_3903 IPR004013 PHP domain CH48_3903 IPR003141 Polymerase/histidinol phosphatase, N-terminal CH48_3903 IPR016195 Polymerase/histidinol phosphatase-like CH48_3904 IPR006805 Anthranilate synthase component I, N-terminal CH48_3904 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial CH48_3904 IPR015890 Chorismate-utilising enzyme, C-terminal CH48_3904 IPR005801 ADC synthase CH48_3904 IPR019999 Anthranilate synthase component I-like CH48_3905 IPR029062 Class I glutamine amidotransferase-like CH48_3905 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain CH48_3905 IPR017926 Glutamine amidotransferase CH48_3906 IPR017459 Glycosyl transferase family 3, N-terminal domain CH48_3906 IPR005940 Anthranilate phosphoribosyl transferase CH48_3906 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily CH48_3906 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily CH48_3906 IPR000312 Glycosyl transferase, family 3 CH48_3907 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) CH48_3907 IPR013785 Aldolase-type TIM barrel CH48_3907 IPR011060 Ribulose-phosphate binding barrel CH48_3907 IPR001468 Indole-3-glycerol phosphate synthase, conserved site CH48_3907 IPR013798 Indole-3-glycerol phosphate synthase CH48_3908 IPR001926 Pyridoxal-phosphate dependent enzyme CH48_3908 IPR006653 Tryptophan synthase, beta chain, conserved site CH48_3908 IPR006654 Tryptophan synthase, beta chain CH48_3908 IPR023026 Tryptophan synthase beta chain/beta chain-like CH48_3908 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CH48_3909 IPR002028 Tryptophan synthase, alpha chain CH48_3909 IPR013785 Aldolase-type TIM barrel CH48_3909 IPR018204 Tryptophan synthase, alpha chain, active site CH48_3909 IPR011060 Ribulose-phosphate binding barrel CH48_391 IPR003544 Cytochrome c-type biogenesis protein CcmB CH48_391 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria CH48_3911 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CH48_3911 IPR005618 Outer membrane protein, OmpW CH48_3912 IPR005358 Putative zinc- or iron-chelating domain containing protein CH48_3913 IPR009627 Uncharacterised protein family UPF0259 CH48_3915 IPR006008 Intracellular septation protein A CH48_3916 IPR029069 HotDog domain superfamily CH48_3916 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain CH48_3916 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase CH48_3916 IPR006683 Thioesterase domain CH48_3917 IPR006260 TonB/TolA, C-terminal CH48_3917 IPR003538 Gram-negative bacterial TonB protein CH48_3917 IPR037682 TonB, C-terminal CH48_3918 IPR005545 YCII-related CH48_3918 IPR011008 Dimeric alpha-beta barrel CH48_392 IPR003439 ABC transporter-like CH48_392 IPR017871 ABC transporter, conserved site CH48_392 IPR005895 ABC transporter, haem export, CcmA CH48_392 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_392 IPR003593 AAA+ ATPase domain CH48_3922 IPR025202 Phospholipase D-like domain CH48_3922 IPR027379 Cardiolipin synthase N-terminal CH48_3922 IPR030840 Cardiolipin synthase A CH48_3922 IPR022924 Cardiolipin synthase CH48_3922 IPR001736 Phospholipase D/Transphosphatidylase CH48_3923 IPR036763 Putative dsDNA mimic superfamily CH48_3923 IPR007376 dsDNA mimic, putative CH48_3924 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_3924 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CH48_3924 IPR017871 ABC transporter, conserved site CH48_3924 IPR003439 ABC transporter-like CH48_3924 IPR003593 AAA+ ATPase domain CH48_3925 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_3925 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CH48_3925 IPR017871 ABC transporter, conserved site CH48_3925 IPR003439 ABC transporter-like CH48_3925 IPR003593 AAA+ ATPase domain CH48_3926 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CH48_3926 IPR035906 MetI-like superfamily CH48_3926 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CH48_3927 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CH48_3927 IPR035906 MetI-like superfamily CH48_3928 IPR000914 Solute-binding protein family 5 domain CH48_3928 IPR023765 Solute-binding protein family 5, conserved site CH48_3928 IPR039424 Solute-binding protein family 5 CH48_3928 IPR030678 Peptide/nickel binding protein, MppA-type CH48_3929 IPR000914 Solute-binding protein family 5 domain CH48_3929 IPR023765 Solute-binding protein family 5, conserved site CH48_3929 IPR030678 Peptide/nickel binding protein, MppA-type CH48_3929 IPR039424 Solute-binding protein family 5 CH48_3930 IPR002771 Multiple antibiotic resistance (MarC)-related CH48_3931 IPR016163 Aldehyde dehydrogenase, C-terminal CH48_3931 IPR034789 Bifunctional aldehyde-alcohol dehydrogenase, C-terminal domain CH48_3931 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase CH48_3931 IPR016161 Aldehyde/histidinol dehydrogenase CH48_3931 IPR039697 Iron-type alcohol dehydrogenase-like CH48_3931 IPR018211 Alcohol dehydrogenase, iron-type, conserved site CH48_3931 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA CH48_3931 IPR016162 Aldehyde dehydrogenase, N-terminal CH48_3931 IPR015590 Aldehyde dehydrogenase domain CH48_3932 IPR001267 Thymidine kinase CH48_3932 IPR020633 Thymidine kinase, conserved site CH48_3932 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_3933 IPR001801 Histone-like protein H-NS CH48_3933 IPR027454 Histone-like protein H-NS, N-terminal CH48_3933 IPR027444 Histone-like protein H-NS, C-terminal domain CH48_3933 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily CH48_3934 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type CH48_3934 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal CH48_3934 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal CH48_3934 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation CH48_3934 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily CH48_3934 IPR036291 NAD(P)-binding domain superfamily CH48_3934 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CH48_3934 IPR017476 UDP-glucose/GDP-mannose dehydrogenase CH48_3935 IPR039420 Transcriptional regulatory protein WalR-like CH48_3935 IPR001789 Signal transduction response regulator, receiver domain CH48_3935 IPR028616 Regulator of RpoS CH48_3935 IPR036457 PPM-type phosphatase domain superfamily CH48_3935 IPR011006 CheY-like superfamily CH48_3936 IPR002641 Patatin-like phospholipase domain CH48_3936 IPR001423 Lysophospholipase patatin, conserved site CH48_3936 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CH48_3937 IPR032710 NTF2-like domain superfamily CH48_3937 IPR023006 Uncharacterised protein family UPF0225 CH48_3937 IPR004027 SEC-C motif CH48_3938 IPR004810 Formyltetrahydrofolate deformylase CH48_3938 IPR002376 Formyl transferase, N-terminal CH48_3938 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain CH48_3938 IPR002912 ACT domain CH48_3938 IPR036477 Formyl transferase, N-terminal domain superfamily CH48_394 IPR003836 Glucokinase CH48_3942 IPR036390 Winged helix DNA-binding domain superfamily CH48_3942 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_3942 IPR005119 LysR, substrate-binding CH48_3942 IPR000847 Transcription regulator HTH, LysR CH48_3943 IPR004808 AP endonuclease 1 CH48_3943 IPR020848 AP endonuclease 1, conserved site CH48_3943 IPR036691 Endonuclease/exonuclease/phosphatase superfamily CH48_3943 IPR005135 Endonuclease/exonuclease/phosphatase CH48_3943 IPR020847 AP endonuclease 1, binding site CH48_3943 IPR037493 Exodeoxyribonuclease III-like CH48_3944 IPR020084 NUDIX hydrolase, conserved site CH48_3944 IPR000086 NUDIX hydrolase domain CH48_3944 IPR015797 NUDIX hydrolase-like domain superfamily CH48_3944 IPR020476 NUDIX hydrolase CH48_3945 IPR009971 Protein of unknown function DUF1496 CH48_3946 IPR023405 DNA topoisomerase, type IA, core domain CH48_3946 IPR023406 DNA topoisomerase, type IA, active site CH48_3946 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 CH48_3946 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CH48_3946 IPR000380 DNA topoisomerase, type IA CH48_3946 IPR003602 DNA topoisomerase, type IA, DNA-binding domain CH48_3946 IPR006171 TOPRIM domain CH48_3946 IPR013497 DNA topoisomerase, type IA, central CH48_3946 IPR005738 DNA topoisomerase III CH48_3946 IPR003601 DNA topoisomerase, type IA, domain 2 CH48_3946 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CH48_3946 IPR034144 DNA topoisomerase 3-like, TOPRIM domain CH48_3947 IPR010918 PurM-like, C-terminal domain CH48_3947 IPR023061 Selenophosphate synthetase, class I CH48_3947 IPR036921 PurM-like, N-terminal domain superfamily CH48_3947 IPR036676 PurM-like, C-terminal domain superfamily CH48_3947 IPR004536 Selenophosphate synthetase CH48_3947 IPR016188 PurM-like, N-terminal domain CH48_3948 IPR029479 Nitroreductase CH48_3948 IPR026021 Putative NAD(P)H nitroreductase YdjA-like CH48_3948 IPR000415 Nitroreductase-like CH48_3949 IPR033854 Signal peptide peptidase A CH48_3949 IPR029045 ClpP/crotonase-like domain superfamily CH48_3949 IPR004634 Peptidase S49, protease IV CH48_3949 IPR002142 Peptidase S49 CH48_3949 IPR004635 Peptidase S49, SppA CH48_3950 IPR006034 Asparaginase/glutaminase-like CH48_3950 IPR036152 Asparaginase/glutaminase-like superfamily CH48_3950 IPR006033 Type I L-asparaginase family CH48_3950 IPR027475 Asparaginase/glutaminase, active site 2 CH48_3950 IPR037152 L-asparaginase, N-terminal domain superfamily CH48_3950 IPR027474 L-asparaginase, N-terminal CH48_3950 IPR041725 Type I (cytosolic) L-asparaginase CH48_3950 IPR027473 L-asparaginase, C-terminal CH48_3950 IPR040919 Asparaginase/glutaminase, C-terminal CH48_3950 IPR020827 Asparaginase/glutaminase, active site 1 CH48_3951 IPR000868 Isochorismatase-like CH48_3951 IPR036380 Isochorismatase-like superfamily CH48_3953 IPR009749 Protein of unknown function DUF1315 CH48_3954 IPR028427 Peptide methionine sulfoxide reductase CH48_3954 IPR011057 Mss4-like superfamily CH48_3954 IPR002579 Peptide methionine sulphoxide reductase MrsB CH48_3955 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site CH48_3955 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family CH48_3955 IPR036291 NAD(P)-binding domain superfamily CH48_3955 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I CH48_3955 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain CH48_3955 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain CH48_3956 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase CH48_3956 IPR025532 Glucose-6-phosphate 1-epimerase CH48_3956 IPR014718 Glycoside hydrolase-type carbohydrate-binding CH48_3956 IPR011013 Galactose mutarotase-like domain superfamily CH48_3957 IPR010583 MltA-interacting MipA CH48_3958 IPR013153 PrkA AAA domain CH48_3958 IPR016230 Serine-protein kinase, PrkA CH48_3958 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_3958 IPR010650 PrkA C-terminal domain CH48_3959 IPR006698 Uncharacterised protein family UPF0229 CH48_396 IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme CH48_396 IPR000399 TPP-binding enzyme, conserved site CH48_396 IPR012000 Thiamine pyrophosphate enzyme, central domain CH48_396 IPR029035 DHS-like NAD/FAD-binding domain superfamily CH48_396 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CH48_396 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CH48_396 IPR017764 Indole-3-pyruvate decarboxylase, Enterobacteriaceae CH48_396 IPR029061 Thiamin diphosphate-binding fold CH48_3962 IPR036390 Winged helix DNA-binding domain superfamily CH48_3962 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_3962 IPR000847 Transcription regulator HTH, LysR CH48_3962 IPR005119 LysR, substrate-binding CH48_3963 IPR008778 Pirin, C-terminal domain CH48_3963 IPR003829 Pirin, N-terminal domain CH48_3963 IPR014710 RmlC-like jelly roll fold CH48_3963 IPR012093 Pirin CH48_3963 IPR011051 RmlC-like cupin domain superfamily CH48_3964 IPR000160 GGDEF domain CH48_3964 IPR001610 PAC motif CH48_3964 IPR000014 PAS domain CH48_3964 IPR000700 PAS-associated, C-terminal CH48_3964 IPR035919 EAL domain superfamily CH48_3964 IPR001633 EAL domain CH48_3964 IPR012226 Diguanylate cyclase/phosphodiesterase CH48_3964 IPR029787 Nucleotide cyclase CH48_3964 IPR035965 PAS domain superfamily CH48_3965 IPR036259 MFS transporter superfamily CH48_3965 IPR020846 Major facilitator superfamily domain CH48_3965 IPR011701 Major facilitator superfamily CH48_3965 IPR005829 Sugar transporter, conserved site CH48_3965 IPR023697 Multidrug resistance protein MdtL CH48_3966 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal CH48_3966 IPR001608 Alanine racemase, N-terminal CH48_3966 IPR011079 Alanine racemase, C-terminal CH48_3966 IPR029066 PLP-binding barrel CH48_3966 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site CH48_3966 IPR000821 Alanine racemase CH48_3967 IPR006076 FAD dependent oxidoreductase CH48_3967 IPR036188 FAD/NAD(P)-binding domain superfamily CH48_3967 IPR023080 D-amino acid dehydrogenase DadA CH48_3968 IPR007390 Sporulation stage V, protein R CH48_3969 IPR000524 Transcription regulator HTH, GntR CH48_3969 IPR008920 Transcription regulator FadR/GntR, C-terminal CH48_3969 IPR028374 FadR, C-terminal domain CH48_3969 IPR014178 Fatty acid response transcription factor FadR CH48_3969 IPR036390 Winged helix DNA-binding domain superfamily CH48_3969 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_397 IPR000847 Transcription regulator HTH, LysR CH48_397 IPR036390 Winged helix DNA-binding domain superfamily CH48_397 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_397 IPR005119 LysR, substrate-binding CH48_3970 IPR004671 Na+/H+ antiporter NhaB CH48_3971 IPR003752 Disulphide bond formation protein DsbB/BdbC CH48_3971 IPR022920 Disulphide bond formation protein DsbB CH48_3971 IPR023380 DsbB-like superfamily CH48_3972 IPR023648 Copper homeostasis CutC domain CH48_3972 IPR036822 Copper homeostasis (CutC) domain superfamily CH48_3972 IPR005627 Copper homeostasis protein CutC CH48_3974 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CH48_3974 IPR010393 Protein of unknown function DUF991 CH48_3975 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CH48_3975 IPR005148 Arginyl tRNA synthetase N-terminal domain CH48_3975 IPR008909 DALR anticodon binding CH48_3975 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily CH48_3975 IPR035684 Arginyl-tRNA synthetase, catalytic core domain CH48_3975 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH48_3975 IPR001278 Arginine-tRNA ligase CH48_3975 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CH48_3977 IPR003714 PhoH-like protein CH48_3977 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_3979 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD CH48_398 IPR023210 NADP-dependent oxidoreductase domain CH48_398 IPR036812 NADP-dependent oxidoreductase domain superfamily CH48_3980 IPR029044 Nucleotide-diphospho-sugar transferases CH48_3980 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA CH48_3980 IPR001173 Glycosyltransferase 2-like CH48_3981 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB CH48_3981 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal CH48_3981 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CH48_3981 IPR002509 NodB homology domain CH48_3982 IPR011990 Tetratricopeptide-like helical domain superfamily CH48_3982 IPR013026 Tetratricopeptide repeat-containing domain CH48_3982 IPR023870 Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA CH48_3982 IPR019734 Tetratricopeptide repeat CH48_3984 IPR000994 Peptidase M24 CH48_3984 IPR036005 Creatinase/aminopeptidase-like CH48_3984 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CH48_3985 IPR022770 Ferric iron reductase FhuF domain CH48_3985 IPR024726 Ferric iron reductase, C-terminal CH48_3985 IPR008090 Ferric iron reductase CH48_3986 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily CH48_3986 IPR012947 Threonyl/alanyl tRNA synthetase, SAD CH48_3986 IPR002318 Alanine-tRNA ligase, class IIc CH48_3986 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily CH48_3986 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal CH48_3986 IPR003156 DHHA1 domain CH48_3986 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain CH48_3986 IPR009000 Translation protein, beta-barrel domain superfamily CH48_3986 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria CH48_3987 IPR000847 Transcription regulator HTH, LysR CH48_3987 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_3987 IPR005119 LysR, substrate-binding CH48_3987 IPR036390 Winged helix DNA-binding domain superfamily CH48_3988 IPR015985 Tellurite resistance methyltransferase TehB-like domain CH48_3988 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH48_3988 IPR014710 RmlC-like jelly roll fold CH48_3988 IPR015392 Domain of unknown function DUF1971 CH48_3988 IPR014431 Tellurite resistance methyltransferase, TehB type-2 CH48_3988 IPR004537 Tellurite resistance methyltransferase, TehB CH48_3990 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CH48_3990 IPR023555 Thiol-disulphide oxidoreductase ResA CH48_3990 IPR036249 Thioredoxin-like superfamily CH48_3990 IPR013766 Thioredoxin domain CH48_3991 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_3991 IPR025857 MacB-like periplasmic core domain CH48_3991 IPR017871 ABC transporter, conserved site CH48_3991 IPR017911 ABC transporter, macrolide export, ATP-binding domain CH48_3991 IPR003838 ABC transporter permease protein domain CH48_3991 IPR003439 ABC transporter-like CH48_3991 IPR003593 AAA+ ATPase domain CH48_3993 IPR003838 ABC transporter permease protein domain CH48_3993 IPR025857 MacB-like periplasmic core domain CH48_3993 IPR017911 ABC transporter, macrolide export, ATP-binding domain CH48_3993 IPR017871 ABC transporter, conserved site CH48_3993 IPR003439 ABC transporter-like CH48_3993 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_3993 IPR003593 AAA+ ATPase domain CH48_3995 IPR018470 Periplasmic metal-binding protein Tp34-type CH48_3995 IPR038482 Periplasmic metal-binding protein tp34-type superfamily CH48_3996 IPR004923 Iron permease FTR1/Fip1/EfeU CH48_3999 IPR012338 Beta-lactamase/transpeptidase-like CH48_3999 IPR015868 Glutaminase CH48_4 IPR002347 Short-chain dehydrogenase/reductase SDR CH48_4 IPR036291 NAD(P)-binding domain superfamily CH48_4 IPR020904 Short-chain dehydrogenase/reductase, conserved site CH48_4 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase CH48_400 IPR001046 NRAMP family CH48_4000 IPR036237 Xylose isomerase-like superfamily CH48_4000 IPR013022 Xylose isomerase-like, TIM barrel domain CH48_4000 IPR026040 Hydroxypyruvate isomerase-like CH48_4001 IPR036409 Class II aldolase/adducin N-terminal domain superfamily CH48_4001 IPR001303 Class II aldolase/adducin N-terminal CH48_4002 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily CH48_4002 IPR042213 Nucleotide-binding, C-terminal domain superfamily CH48_4002 IPR031475 Nucleotide-binding C-terminal domain CH48_4002 IPR010737 Four-carbon acid sugar kinase, N-terminal domain CH48_4003 IPR036390 Winged helix DNA-binding domain superfamily CH48_4003 IPR014036 DeoR C-terminal sensor domain CH48_4003 IPR037171 NagB/RpiA transferase-like CH48_4003 IPR018356 Transcription regulator, HTH DeoR-type, conserved site CH48_4003 IPR001034 DeoR-type HTH domain CH48_4003 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_4004 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CH48_4004 IPR000014 PAS domain CH48_4004 IPR029151 Periplasmic sensor-like domain superfamily CH48_4004 IPR033463 Single cache domain 3 CH48_4004 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB CH48_4004 IPR003594 Histidine kinase/HSP90-like ATPase CH48_4004 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH48_4004 IPR005467 Histidine kinase domain CH48_4004 IPR039506 SpoOB, alpha-helical domain CH48_4004 IPR013767 PAS fold CH48_4004 IPR035965 PAS domain superfamily CH48_4005 IPR001789 Signal transduction response regulator, receiver domain CH48_4005 IPR024187 Signal transduction response regulator, citrate/malate metabolism CH48_4005 IPR011006 CheY-like superfamily CH48_4006 IPR004679 2-hydroxycarboxylate transporter CH48_4006 IPR018025 2-hydroxycarboxylate transporter, Proteobacteria/Firmicutes CH48_4007 IPR004840 Amino acid permease, conserved site CH48_4007 IPR004841 Amino acid permease/ SLC12A domain CH48_401 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain CH48_401 IPR008276 Concentrative nucleoside transporter CH48_401 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial CH48_401 IPR002668 Concentrative nucleoside transporter N-terminal domain CH48_401 IPR011657 Concentrative nucleoside transporter C-terminal domain CH48_4010 IPR011701 Major facilitator superfamily CH48_4010 IPR036259 MFS transporter superfamily CH48_4010 IPR020846 Major facilitator superfamily domain CH48_4011 IPR023214 HAD superfamily CH48_4011 IPR006379 HAD-superfamily hydrolase, subfamily IIB CH48_4011 IPR000150 Cof family CH48_4011 IPR036412 HAD-like superfamily CH48_4013 IPR001207 Transposase, mutator type CH48_4014 IPR000772 Ricin B, lectin domain CH48_4014 IPR035992 Ricin B-like lectins CH48_4015 IPR016584 Methyltransferase VrtF-like CH48_4015 IPR013217 Methyltransferase type 12 CH48_4015 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH48_4016 IPR001207 Transposase, mutator type CH48_4025 IPR011010 DNA breaking-rejoining enzyme, catalytic core CH48_4025 IPR013762 Integrase-like, catalytic domain superfamily CH48_4025 IPR011931 Tyrosine recombinase XerC CH48_4025 IPR004107 Integrase, SAM-like, N-terminal CH48_4025 IPR010998 Integrase/recombinase, N-terminal CH48_4025 IPR002104 Integrase, catalytic domain CH48_4025 IPR023009 Tyrosine recombinase XerC/XerD CH48_4026 IPR019648 Protein of unknown function DUF2511 CH48_4027 IPR008457 Copper resistance protein D CH48_4027 IPR032694 Copper transport protein C/D CH48_4028 IPR007348 CopC domain CH48_4028 IPR032694 Copper transport protein C/D CH48_4028 IPR014756 Immunoglobulin E-set CH48_4029 IPR001519 Ferritin CH48_4029 IPR009040 Ferritin-like diiron domain CH48_4029 IPR009078 Ferritin-like superfamily CH48_4029 IPR008331 Ferritin/DPS protein domain CH48_4029 IPR041719 Ferritin, prokaryotic-type CH48_4029 IPR012347 Ferritin-like CH48_4030 IPR009052 DNA polymerase III-theta, bacterial CH48_4030 IPR036745 DNA polymerase III-theta superfamily CH48_4031 IPR000073 Alpha/beta hydrolase fold-1 CH48_4031 IPR005944 Proline iminopeptidase CH48_4031 IPR002410 Peptidase S33 CH48_4031 IPR029058 Alpha/Beta hydrolase fold CH48_4033 IPR036397 Ribonuclease H superfamily CH48_4033 IPR012337 Ribonuclease H-like superfamily CH48_4033 IPR013520 Exonuclease, RNase T/DNA polymerase III CH48_4034 IPR002471 Peptidase S9, serine active site CH48_4034 IPR029058 Alpha/Beta hydrolase fold CH48_4034 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain CH48_4034 IPR002470 Peptidase S9A, prolyl oligopeptidase CH48_4034 IPR023302 Peptidase S9A, N-terminal domain CH48_4035 IPR020236 Uncharacterised protein family YebF CH48_4035 IPR038703 YebF/Cmi superfamily CH48_4035 IPR025603 YebF/Colicin-M immunity protein CH48_4037 IPR009813 Uncharacterised protein family YebG CH48_4037 IPR038627 YebG-like superfamily CH48_4038 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_4038 IPR001650 Helicase, C-terminal CH48_4038 IPR014001 Helicase superfamily 1/2, ATP-binding domain CH48_4038 IPR028619 ATP-dependent RNA helicase DbpA CH48_4038 IPR011545 DEAD/DEAH box helicase domain CH48_4038 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain CH48_4038 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily CH48_4038 IPR014014 RNA helicase, DEAD-box type, Q motif CH48_4038 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CH48_4039 IPR011761 ATP-grasp fold CH48_4039 IPR013815 ATP-grasp fold, subdomain 1 CH48_4039 IPR016185 Pre-ATP-grasp domain superfamily CH48_4039 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase CH48_4039 IPR011054 Rudiment single hybrid motif CH48_4039 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type CH48_4040 IPR005371 Uncharacterised protein family UPF0181 CH48_4041 IPR005802 Aminodeoxychorismate synthase, component I CH48_4041 IPR005801 ADC synthase CH48_4041 IPR019999 Anthranilate synthase component I-like CH48_4041 IPR015890 Chorismate-utilising enzyme, C-terminal CH48_4041 IPR006805 Anthranilate synthase component I, N-terminal CH48_4042 IPR023735 Uncharacterised nudix hydrolase NudL CH48_4042 IPR000059 NUDIX hydrolase, NudL, conserved site CH48_4042 IPR015797 NUDIX hydrolase-like domain superfamily CH48_4042 IPR000086 NUDIX hydrolase domain CH48_4043 IPR029009 Allosteric substrate binding domain superfamily CH48_4043 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form CH48_4043 IPR005131 Serine dehydratase beta chain CH48_4043 IPR005130 Serine dehydratase-like, alpha subunit CH48_4045 IPR019806 Heat-stable enterotoxin, conserved site CH48_4045 IPR001489 Heat-stable enterotoxin, STa CH48_4046 IPR036318 FAD-binding, type PCMH-like superfamily CH48_4046 IPR016169 FAD-binding, type PCMH, subdomain 2 CH48_4046 IPR005496 Integral membrane protein TerC CH48_4046 IPR005170 Transporter-associated domain CH48_4046 IPR000644 CBS domain CH48_4047 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup CH48_4047 IPR013789 Phosphotransferase system, mannose family IIA component CH48_4047 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily CH48_4047 IPR033887 PTS system mannose/sorbose specific IIA subunit CH48_4047 IPR004720 Phosphotransferase system, sorbose subfamily IIB component CH48_4047 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily CH48_4047 IPR004701 Phosphotransferase system, mannose-type IIA component CH48_4048 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit CH48_4049 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component CH48_4050 IPR009328 Protein of unknown function DUF986 CH48_4051 IPR003810 Putative manganese efflux pump CH48_4051 IPR022929 Putative manganese efflux pump MntP CH48_4052 IPR030149 TonB-dependent siderophore receptor FcuA/FatA CH48_4052 IPR012910 TonB-dependent receptor, plug domain CH48_4052 IPR037066 TonB-dependent receptor, plug domain superfamily CH48_4052 IPR039423 TonB-dependent receptor-like CH48_4052 IPR010916 TonB box, conserved site CH48_4052 IPR000531 TonB-dependent receptor-like, beta-barrel CH48_4052 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CH48_4052 IPR010917 TonB-dependent receptor, conserved site CH48_4052 IPR010105 TonB-dependent siderophore receptor CH48_4053 IPR000160 GGDEF domain CH48_4053 IPR013655 PAS fold-3 CH48_4053 IPR013656 PAS fold-4 CH48_4053 IPR035965 PAS domain superfamily CH48_4053 IPR000700 PAS-associated, C-terminal CH48_4053 IPR007895 MASE1 CH48_4053 IPR000014 PAS domain CH48_4053 IPR001610 PAC motif CH48_4053 IPR035919 EAL domain superfamily CH48_4053 IPR001633 EAL domain CH48_4053 IPR029787 Nucleotide cyclase CH48_4055 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted CH48_4055 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH48_4055 IPR025714 Methyltransferase domain CH48_4056 IPR036138 Penicillin-binding protein, dimerisation domain superfamily CH48_4056 IPR001460 Penicillin-binding protein, transpeptidase CH48_4056 IPR012338 Beta-lactamase/transpeptidase-like CH48_4056 IPR037532 Peptidoglycan D,D-transpeptidase FtsI CH48_4056 IPR005311 Penicillin-binding protein, dimerisation domain CH48_4058 IPR012340 Nucleic acid-binding, OB-fold CH48_4058 IPR011129 Cold shock domain CH48_4058 IPR012156 Cold shock, CspA CH48_4058 IPR019844 Cold-shock (CSD) domain CH48_4058 IPR002059 Cold-shock protein, DNA-binding CH48_4059 IPR019672 Protein of unknown function DUF2627 CH48_406 IPR033910 Glutamyl-tRNA synthetase CH48_406 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain CH48_406 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH48_406 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding CH48_406 IPR000924 Glutamyl/glutaminyl-tRNA synthetase CH48_406 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 CH48_406 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CH48_406 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial CH48_4060 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP CH48_4060 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CH48_4061 IPR004840 Amino acid permease, conserved site CH48_4061 IPR004841 Amino acid permease/ SLC12A domain CH48_4064 IPR025594 YebO-like protein CH48_4065 IPR025611 YobH-like protein CH48_4066 IPR020262 Uncharacterised protein family YecJ CH48_4068 IPR009057 Homeobox-like domain superfamily CH48_4068 IPR018062 HTH domain AraC-type, conserved site CH48_4068 IPR018060 DNA binding HTH domain, AraC-type CH48_4068 IPR020449 Transcription regulator HTH, AraC- type CH48_4070 IPR022461 Arginine/ornithine antiporter CH48_4070 IPR004754 Amino acid antiporter CH48_4070 IPR002293 Amino acid/polyamine transporter I CH48_4072 IPR003439 ABC transporter-like CH48_4072 IPR039421 Type I protein exporter CH48_4072 IPR003593 AAA+ ATPase domain CH48_4072 IPR011527 ABC transporter type 1, transmembrane domain CH48_4072 IPR036640 ABC transporter type 1, transmembrane domain superfamily CH48_4072 IPR017871 ABC transporter, conserved site CH48_4072 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_4074 IPR003539 Cytolethal distending toxin B CH48_4074 IPR036691 Endonuclease/exonuclease/phosphatase superfamily CH48_4074 IPR005135 Endonuclease/exonuclease/phosphatase CH48_4076 IPR000160 GGDEF domain CH48_4076 IPR001294 Phytochrome CH48_4076 IPR029016 GAF-like domain superfamily CH48_4076 IPR003018 GAF domain CH48_4076 IPR016132 Phytochrome chromophore attachment domain CH48_4076 IPR035919 EAL domain superfamily CH48_4076 IPR001633 EAL domain CH48_4076 IPR013515 Phytochrome, central region CH48_4076 IPR029787 Nucleotide cyclase CH48_4078 IPR028623 HNS-dependent expression B CH48_4078 IPR038303 HNS-dependent expression A/B superfamily CH48_4078 IPR010486 HNS-dependent expression A/B CH48_4079 IPR009739 Lysozyme inhibitor LprI, N-terminal CH48_4081 IPR000620 EamA domain CH48_4086 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_4086 IPR002577 Helix-turn-helix, HxlR type CH48_4086 IPR036390 Winged helix DNA-binding domain superfamily CH48_4087 IPR036291 NAD(P)-binding domain superfamily CH48_4087 IPR008030 NmrA-like domain CH48_4088 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CH48_4088 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CH48_4088 IPR015424 Pyridoxal phosphate-dependent transferase CH48_4088 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme CH48_4088 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase CH48_4090 IPR006197 Peptidase S24, LexA-like CH48_4090 IPR039418 LexA-like CH48_4090 IPR036286 LexA/Signal peptidase-like superfamily CH48_4090 IPR015927 Peptidase S24/S26A/S26B/S26C CH48_4091 IPR017961 DNA polymerase, Y-family, little finger domain CH48_4091 IPR025188 Domain of unknown function DUF4113 CH48_4091 IPR001126 UmuC domain CH48_4091 IPR036775 DNA polymerase, Y-family, little finger domain superfamily CH48_4092 IPR000014 PAS domain CH48_4092 IPR035965 PAS domain superfamily CH48_4092 IPR013655 PAS fold-3 CH48_4092 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CH48_4092 IPR003660 HAMP domain CH48_4092 IPR004090 Chemotaxis methyl-accepting receptor CH48_4092 IPR001610 PAC motif CH48_4094 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CH48_4094 IPR001761 Periplasmic binding protein/LacI sugar binding domain CH48_4094 IPR028082 Periplasmic binding protein-like I CH48_4094 IPR000843 LacI-type HTH domain CH48_4095 IPR006232 Sucrose-6-phosphate hydrolase CH48_4095 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily CH48_4095 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily CH48_4095 IPR013148 Glycosyl hydrolase family 32, N-terminal CH48_4095 IPR013189 Glycosyl hydrolase family 32, C-terminal CH48_4095 IPR018053 Glycoside hydrolase, family 32, active site CH48_4095 IPR001362 Glycoside hydrolase, family 32 CH48_4096 IPR036259 MFS transporter superfamily CH48_4096 IPR020846 Major facilitator superfamily domain CH48_4096 IPR018457 LacY/RafB permease family, conserved site CH48_4096 IPR000576 LacY/RafB permease family CH48_41 IPR011013 Galactose mutarotase-like domain superfamily CH48_41 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal CH48_41 IPR014718 Glycoside hydrolase-type carbohydrate-binding CH48_41 IPR013783 Immunoglobulin-like fold CH48_41 IPR014438 Glucan biosynthesis protein MdoG/MdoD CH48_41 IPR014756 Immunoglobulin E-set CH48_41 IPR023704 Glucan biosynthesis protein G CH48_4100 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic CH48_4100 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site CH48_4100 IPR024084 Isopropylmalate dehydrogenase-like domain CH48_4106 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site CH48_4106 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic CH48_4106 IPR024084 Isopropylmalate dehydrogenase-like domain CH48_4107 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F CH48_4107 IPR020103 Pseudouridine synthase, catalytic domain superfamily CH48_4107 IPR006145 Pseudouridine synthase, RsuA/RluA CH48_4107 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain CH48_4107 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site CH48_4108 IPR033713 Phosphatase NudJ CH48_4108 IPR020476 NUDIX hydrolase CH48_4108 IPR015797 NUDIX hydrolase-like domain superfamily CH48_4108 IPR020084 NUDIX hydrolase, conserved site CH48_4108 IPR000086 NUDIX hydrolase domain CH48_4109 IPR004506 tRNA-specific 2-thiouridylase CH48_4109 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH48_4109 IPR023382 Adenine nucleotide alpha hydrolase-like domains CH48_411 IPR024530 Putative quorum-sensing-regulated virulence factor CH48_4110 IPR007451 High frequency lysogenization protein HflD CH48_4110 IPR035932 HflD-like superfamily CH48_4111 IPR024083 Fumarase/histidase, N-terminal CH48_4111 IPR013539 Adenylosuccinate lyase PurB, C-terminal CH48_4111 IPR020557 Fumarate lyase, conserved site CH48_4111 IPR000362 Fumarate lyase family CH48_4111 IPR022761 Fumarate lyase, N-terminal CH48_4111 IPR008948 L-Aspartase-like CH48_4111 IPR004769 Adenylosuccinate lyase CH48_4113 IPR039420 Transcriptional regulatory protein WalR-like CH48_4113 IPR001789 Signal transduction response regulator, receiver domain CH48_4113 IPR011006 CheY-like superfamily CH48_4113 IPR001867 OmpR/PhoB-type DNA-binding domain CH48_4113 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_4114 IPR015014 PhoQ Sensor CH48_4114 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CH48_4114 IPR038429 PhoQ Sensor superfamily CH48_4114 IPR003660 HAMP domain CH48_4114 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CH48_4114 IPR005467 Histidine kinase domain CH48_4114 IPR003594 Histidine kinase/HSP90-like ATPase CH48_4114 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH48_4115 IPR003347 JmjC domain CH48_4115 IPR039994 JmjC domain-containing CH48_4116 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site CH48_4116 IPR036264 Bacterial exopeptidase dimerisation domain CH48_4116 IPR002933 Peptidase M20 CH48_4116 IPR011650 Peptidase M20, dimerisation domain CH48_4116 IPR010161 Peptidase M20B, tripeptide aminopeptidase CH48_4117 IPR029035 DHS-like NAD/FAD-binding domain superfamily CH48_4117 IPR003000 Sirtuin family CH48_4117 IPR026590 Sirtuin family, catalytic core domain CH48_4117 IPR026591 Sirtuin, catalytic core small domain superfamily CH48_4117 IPR027546 Sirtuin, class III CH48_4118 IPR000600 ROK family CH48_4118 IPR023505 N-acetyl-D-glucosamine kinase CH48_4119 IPR003838 ABC transporter permease protein domain CH48_4119 IPR011926 Lipoprotein-releasing system transmembrane protein LolE, gammaproteobacteria type CH48_4119 IPR025857 MacB-like periplasmic core domain CH48_4119 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E CH48_412 IPR001679 NAD-dependent DNA ligase CH48_412 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type CH48_412 IPR010994 RuvA domain 2-like CH48_412 IPR013839 NAD-dependent DNA ligase, adenylation CH48_412 IPR001357 BRCT domain CH48_412 IPR033136 NAD-dependent DNA ligase, conserved site CH48_412 IPR004150 NAD-dependent DNA ligase, OB-fold CH48_412 IPR041663 DisA/LigA, helix-hairpin-helix motif CH48_412 IPR012340 Nucleic acid-binding, OB-fold CH48_412 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 CH48_412 IPR013840 NAD-dependent DNA ligase, N-terminal CH48_412 IPR018239 NAD-dependent DNA ligase, active site CH48_412 IPR036420 BRCT domain superfamily CH48_4120 IPR003593 AAA+ ATPase domain CH48_4120 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_4120 IPR011924 Lipoprotein releasing system, ATP-binding protein CH48_4120 IPR003439 ABC transporter-like CH48_4120 IPR015854 ABC transporter, lipoprotein release, LolD CH48_4120 IPR017871 ABC transporter, conserved site CH48_4121 IPR003838 ABC transporter permease protein domain CH48_4121 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E CH48_4121 IPR025857 MacB-like periplasmic core domain CH48_4122 IPR036101 CarD-like/TRCF domain superfamily CH48_4122 IPR011545 DEAD/DEAH box helicase domain CH48_4122 IPR014001 Helicase superfamily 1/2, ATP-binding domain CH48_4122 IPR001650 Helicase, C-terminal CH48_4122 IPR004576 Transcription-repair coupling factor CH48_4122 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_4122 IPR037235 TRCF-like, C-terminal domain CH48_4122 IPR005118 Transcription-repair-coupling factor, C-terminal domain CH48_4122 IPR041471 UvrB, interaction domain CH48_4122 IPR003711 CarD-like/TRCF domain CH48_4123 IPR008816 Glycine zipper 2TM domain CH48_4125 IPR023753 FAD/NAD(P)-binding domain CH48_4125 IPR036188 FAD/NAD(P)-binding domain superfamily CH48_4126 IPR029058 Alpha/Beta hydrolase fold CH48_4126 IPR022987 Uncharacterised protein family UPF0227 CH48_4126 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA CH48_4127 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily CH48_4127 IPR017853 Glycoside hydrolase superfamily CH48_4127 IPR022956 Beta-hexosaminidase, bacterial CH48_4127 IPR019800 Glycoside hydrolase, family 3, active site CH48_4127 IPR001764 Glycoside hydrolase, family 3, N-terminal CH48_4128 IPR014093 Thiamine kinase CH48_4128 IPR002575 Aminoglycoside phosphotransferase CH48_4128 IPR011009 Protein kinase-like domain superfamily CH48_4129 IPR012640 Membrane lipoprotein, lipid attachment site CH48_4129 IPR014094 Penicillin-binding protein activator LpoB CH48_413 IPR007449 ZipA, C-terminal FtsZ-binding domain CH48_413 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily CH48_413 IPR011919 Cell division protein ZipA CH48_4130 IPR010824 Protein of unknown function DUF1425 CH48_4130 IPR038483 YcfL-like superfamily CH48_4131 IPR011146 HIT-like domain CH48_4131 IPR001310 Histidine triad (HIT) protein CH48_4131 IPR036265 HIT-like superfamily CH48_4131 IPR019808 Histidine triad, conserved site CH48_4132 IPR036291 NAD(P)-binding domain superfamily CH48_4132 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal CH48_4133 IPR000914 Solute-binding protein family 5 domain CH48_4133 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain CH48_4133 IPR023767 Transcriptional regulator SgrR CH48_4133 IPR036390 Winged helix DNA-binding domain superfamily CH48_4133 IPR039424 Solute-binding protein family 5 CH48_4135 IPR023885 4Fe4S-binding SPASM domain CH48_4135 IPR013785 Aldolase-type TIM barrel CH48_4135 IPR034491 Anaerobic Ser-type sulfatase-maturating enzyme CH48_4135 IPR007197 Radical SAM CH48_4137 IPR017871 ABC transporter, conserved site CH48_4137 IPR003439 ABC transporter-like CH48_4137 IPR033838 Colicin V processing peptidase CH48_4137 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_4137 IPR005074 Peptidase C39, bacteriocin processing CH48_4137 IPR003593 AAA+ ATPase domain CH48_4137 IPR039421 Type I protein exporter CH48_4137 IPR036640 ABC transporter type 1, transmembrane domain superfamily CH48_4137 IPR011527 ABC transporter type 1, transmembrane domain CH48_4139 IPR001996 Phosphotransferase system, IIB component, type 1 CH48_4139 IPR036878 Glucose permease domain IIB CH48_4139 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component CH48_4139 IPR011299 PTS system glucose-specific IIBC component CH48_4139 IPR013013 Phosphotransferase system, EIIC component, type 1 CH48_4139 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site CH48_4139 IPR003352 Phosphotransferase system, EIIC CH48_414 IPR022985 Sulfate transporter CysZ CH48_4140 IPR001130 TatD family CH48_4140 IPR032466 Metal-dependent hydrolase CH48_4140 IPR018228 Deoxyribonuclease, TatD-related, conserved site CH48_4140 IPR015991 Uncharacterised hydrolase TatD-type CH48_4141 IPR015199 DNA polymerase III, delta subunit, C-terminal CH48_4141 IPR004622 DNA polymerase III, delta prime subunit CH48_4141 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal CH48_4141 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_4142 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_4142 IPR039430 Thymidylate kinase-like domain CH48_4142 IPR018094 Thymidylate kinase CH48_4142 IPR018095 Thymidylate kinase, conserved site CH48_4143 IPR003770 Endolytic murein transglycosylase CH48_4145 IPR008271 Serine/threonine-protein kinase, active site CH48_4145 IPR003547 Serine/threonine protein kinase, yersinia-type CH48_4145 IPR019093 Rac1-binding domain CH48_4145 IPR000719 Protein kinase domain CH48_4145 IPR011009 Protein kinase-like domain superfamily CH48_4148 IPR017837 Plasmid replication initiator, RepA, IncFII type CH48_4148 IPR003446 Plasmid replication initiation, RepA CH48_415 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site CH48_415 IPR001926 Pyridoxal-phosphate dependent enzyme CH48_415 IPR005856 Cysteine synthase CH48_415 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CH48_415 IPR005859 Cysteine synthase CysK CH48_4150 IPR019661 Replication regulatory protein RepA2 CH48_4152 IPR036397 Ribonuclease H superfamily CH48_4152 IPR001584 Integrase, catalytic core CH48_4152 IPR025948 HTH-like domain CH48_4152 IPR012337 Ribonuclease H-like superfamily CH48_4154 IPR008875 TraX CH48_4154 IPR014125 Type-F conjugative transfer system pilin acetylase TraX CH48_4156 IPR002514 Transposase IS3/IS911family CH48_4156 IPR009057 Homeobox-like domain superfamily CH48_4157 IPR009057 Homeobox-like domain superfamily CH48_4157 IPR002514 Transposase IS3/IS911family CH48_416 IPR035895 HPr-like superfamily CH48_416 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CH48_416 IPR000032 Phosphocarrier protein HPr-like CH48_416 IPR002114 Phosphotransferase system, HPr serine phosphorylation site CH48_4161 IPR014059 Conjugative relaxase, N-terminal CH48_4161 IPR014129 Conjugative transfer relaxase protein TraI CH48_4161 IPR014862 TrwC relaxase CH48_4161 IPR009767 DNA helicase, TraI type CH48_4161 IPR040987 TraI, N-terminal subdomain CH48_4161 IPR040668 TraI, 2B/2B-like domain CH48_4161 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_4162 IPR014063 Arsenate resistance ArsH CH48_4162 IPR029039 Flavoprotein-like superfamily CH48_4162 IPR005025 NADPH-dependent FMN reductase-like CH48_4163 IPR011991 ArsR-like helix-turn-helix domain CH48_4163 IPR018334 ArsR-type transcription regulator, HTH motif CH48_4163 IPR001845 HTH ArsR-type DNA-binding domain CH48_4163 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_4163 IPR036390 Winged helix DNA-binding domain superfamily CH48_4164 IPR000802 Arsenical pump membrane protein, ArsB CH48_4165 IPR006660 Arsenate reductase-like CH48_4165 IPR036249 Thioredoxin-like superfamily CH48_4165 IPR006659 Arsenate reductase CH48_4166 IPR009057 Homeobox-like domain superfamily CH48_4166 IPR006118 Recombinase, conserved site CH48_4166 IPR006119 Resolvase, N-terminal catalytic domain CH48_4166 IPR006120 Resolvase, HTH domain CH48_4166 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily CH48_4168 IPR025296 Domain of unknown function DUF4158 CH48_4168 IPR002513 Tn3 transposase DDE domain CH48_4168 IPR025296 Domain of unknown function DUF4158 CH48_4168 IPR002513 Tn3 transposase DDE domain CH48_417 IPR008731 Phosphotransferase system, enzyme I N-terminal CH48_417 IPR036618 PtsI, HPr-binding domain superfamily CH48_417 IPR006318 Phosphotransferase system, enzyme I-like CH48_417 IPR018274 PEP-utilising enzyme, active site CH48_417 IPR036637 Phosphohistidine domain superfamily CH48_417 IPR023151 PEP-utilising enzyme, conserved site CH48_417 IPR000121 PEP-utilising enzyme, C-terminal CH48_417 IPR040442 Pyruvate kinase-like domain superfamily CH48_417 IPR008279 PEP-utilising enzyme, mobile domain CH48_417 IPR024692 Phosphotransferase system, enzyme I CH48_417 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CH48_4170 IPR000620 EamA domain CH48_4171 IPR005594 YadA-like, C-terminal CH48_4171 IPR011049 Serralysin-like metalloprotease, C-terminal CH48_4171 IPR008126 Outer membrane adhesion, Yersinia CH48_4171 IPR008635 Coiled stalk of trimeric autotransporter adhesin CH48_4171 IPR008640 Head domain of trimeric autotransporter adhesin CH48_4173 IPR002513 Tn3 transposase DDE domain CH48_4173 IPR025296 Domain of unknown function DUF4158 CH48_4174 IPR015103 Protein-tyrosine phosphatase, YopH, N-terminal CH48_4174 IPR036484 Protein-tyrosine phosphatase, YopH, N-terminal domain superfamily CH48_4177 IPR009057 Homeobox-like domain superfamily CH48_4177 IPR002514 Transposase IS3/IS911family CH48_4178 IPR009057 Homeobox-like domain superfamily CH48_4178 IPR002514 Transposase IS3/IS911family CH48_418 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 CH48_418 IPR011055 Duplicated hybrid motif CH48_4181 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_4181 IPR025669 AAA domain CH48_4182 IPR004437 ParB/RepB/Spo0J partition protein CH48_4182 IPR003115 ParB/Sulfiredoxin CH48_4182 IPR036086 ParB/Sulfiredoxin superfamily CH48_4182 IPR040873 SopB, HTH domain CH48_4183 IPR038296 Antitoxin ParD superfamily CH48_4183 IPR022789 Antitoxin ParD CH48_4183 IPR010985 Ribbon-helix-helix CH48_4185 IPR037168 Virulence factor YopE, GAP domain superfamily CH48_4185 IPR015110 YopE, N-terminal domain CH48_4185 IPR014773 Virulence factor YopE, GAP domain CH48_4185 IPR003537 Yersinia virulence determinant YopE CH48_4186 IPR010261 Tir chaperone protein (CesT) family CH48_4186 IPR005416 Type III secretion chaperone SycE CH48_4187 IPR012337 Ribonuclease H-like superfamily CH48_4187 IPR001584 Integrase, catalytic core CH48_4187 IPR036397 Ribonuclease H superfamily CH48_4187 IPR038965 Transposase InsF-like CH48_4189 IPR003595 Protein-tyrosine phosphatase, catalytic CH48_4189 IPR003546 Type III secreted modular tyrosine phosphatase, SptP/YopH CH48_4189 IPR000387 Tyrosine specific protein phosphatases domain CH48_4189 IPR015103 Protein-tyrosine phosphatase, YopH, N-terminal CH48_4189 IPR029021 Protein-tyrosine phosphatase-like CH48_4189 IPR000242 PTP type protein phosphatase CH48_4189 IPR016130 Protein-tyrosine phosphatase, active site CH48_4189 IPR036484 Protein-tyrosine phosphatase, YopH, N-terminal domain superfamily CH48_419 IPR003594 Histidine kinase/HSP90-like ATPase CH48_419 IPR005467 Histidine kinase domain CH48_419 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CH48_419 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CH48_419 IPR003660 HAMP domain CH48_419 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CH48_419 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH48_419 IPR032404 Two-component sensor protein CpxA, periplasmic domain CH48_419 IPR038515 CpxA, periplasmic domain superfamily CH48_4190 IPR036484 Protein-tyrosine phosphatase, YopH, N-terminal domain superfamily CH48_4190 IPR015103 Protein-tyrosine phosphatase, YopH, N-terminal CH48_4191 IPR012842 Type III secretion system HrpE/YscL CH48_4191 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE CH48_4192 IPR009510 Type III secretion system, secretion protein K CH48_4193 IPR006182 Secretory protein YscJ/FliF CH48_4193 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ CH48_4194 IPR012670 Type III secretion system, YscI/HrpB CH48_4195 IPR041814 Type III secretion system virulence factor YopR, core domain CH48_4195 IPR013349 Type III secretion system effector YopR CH48_4196 IPR013348 Type III secretion system YscG CH48_4196 IPR011990 Tetratricopeptide-like helical domain superfamily CH48_4197 IPR011841 Type III secretion system, needle protein CH48_4197 IPR037203 Type III secretion, needle-protein-like superfamily CH48_4197 IPR021123 Type III secretion, needle-protein-like CH48_4198 IPR012671 Type III secretion system, secretion protein E CH48_4199 IPR000253 Forkhead-associated (FHA) domain CH48_4199 IPR008984 SMAD/FHA domain superfamily CH48_4199 IPR012843 Type III secretion system YscD/HrpQ CH48_4199 IPR032030 YscD, cytoplasmic domain CH48_4199 IPR032034 Yop protein translocation protein D, periplasmic domain CH48_42 IPR023723 Glucan biosynthesis protein C CH48_42 IPR002656 Acyltransferase 3 CH48_420 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_420 IPR001789 Signal transduction response regulator, receiver domain CH48_420 IPR001867 OmpR/PhoB-type DNA-binding domain CH48_420 IPR039420 Transcriptional regulatory protein WalR-like CH48_420 IPR011006 CheY-like superfamily CH48_4201 IPR010261 Tir chaperone protein (CesT) family CH48_4201 IPR013353 Type III secretion system chaperone YscB CH48_4202 IPR037923 Transcription regulator HTH-like CH48_4202 IPR009057 Homeobox-like domain superfamily CH48_4202 IPR018062 HTH domain AraC-type, conserved site CH48_4202 IPR020449 Transcription regulator HTH, AraC- type CH48_4202 IPR018060 DNA binding HTH domain, AraC-type CH48_4204 IPR029025 Type III secretion system substrate exporter, C-terminal CH48_4204 IPR006135 Type III secretion system substrate exporter CH48_4204 IPR006307 Type III exporter system, secretion apparatus protein BsaZ CH48_4205 IPR006304 Type III secretion protein SpaR/YscT CH48_4205 IPR002010 Type III secretion system inner membrane R protein CH48_4206 IPR002191 Bacterial export protein family 3 CH48_4206 IPR006306 Type III secretion protein HrpO CH48_4207 IPR005773 Yop virulence translocation protein R CH48_4207 IPR005838 Type III secretion system inner membrane P protein CH48_4208 IPR036429 SpoA-like superfamily CH48_4208 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO CH48_4208 IPR003283 Type III secretion system outer membrane, SpaO CH48_4208 IPR001543 Surface presentation of antigen (SpoA) CH48_4209 IPR021136 Flagellar hook-length control protein-like, C-terminal CH48_4209 IPR013354 Type III secretion system needle length determinant, C-terminal domain CH48_421 IPR006143 RND efflux pump, membrane fusion protein CH48_421 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CH48_421 IPR030190 Macrolide export protein MacA CH48_4210 IPR009929 Type III secretion sytem,YscO CH48_4211 IPR013380 ATPase, type III secretion system, H+-transporting CH48_4211 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_4211 IPR040627 T3SS EscN ATPase, C-terminal CH48_4211 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CH48_4211 IPR003593 AAA+ ATPase domain CH48_4211 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site CH48_4211 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain CH48_4211 IPR005714 ATPase, type III secretion system, FliI/YscN CH48_4212 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CH48_4212 IPR003593 AAA+ ATPase domain CH48_4212 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site CH48_4212 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain CH48_4212 IPR005714 ATPase, type III secretion system, FliI/YscN CH48_4212 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_4212 IPR013380 ATPase, type III secretion system, H+-transporting CH48_4212 IPR040627 T3SS EscN ATPase, C-terminal CH48_4213 IPR013401 Type III secretion regulator, YopN/LcrE/InvE/MxiC CH48_4213 IPR010812 Hypersensitivity response secretion-like, HrpJ CH48_4214 IPR013351 Type III secretion system effector delivery regulator TyeA-related CH48_4214 IPR038347 TyeA superfamily CH48_4214 IPR015144 Type III secretion system effector delivery regulator TyeA CH48_4215 IPR012673 Type III secretion system chaperone SycN CH48_4216 IPR012672 Type III secretion system YscX CH48_4217 IPR016684 Type III secretion system chaperone, YscY CH48_4217 IPR011990 Tetratricopeptide-like helical domain superfamily CH48_4218 IPR025505 FHIPEP conserved site CH48_4218 IPR042196 FHIPEP, domain 4 CH48_4218 IPR042193 FHIPEP, domain 3 CH48_4218 IPR042194 FHIPEP, domain 1 CH48_4218 IPR006302 Type III secretion protein HrcV CH48_4218 IPR001712 Type III secretion system FHIPEP CH48_4219 IPR013405 Type III secretion system regulator, LcrR CH48_4219 IPR022797 Type III secretion system regulator LcrR/Chaperone CesD2 CH48_422 IPR017871 ABC transporter, conserved site CH48_422 IPR003439 ABC transporter-like CH48_422 IPR003838 ABC transporter permease protein domain CH48_422 IPR003593 AAA+ ATPase domain CH48_422 IPR017911 ABC transporter, macrolide export, ATP-binding domain CH48_422 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_422 IPR025857 MacB-like periplasmic core domain CH48_4220 IPR009863 Type III secretion protein, LcrG CH48_4221 IPR036139 Virulence-associated V antigen superfamily CH48_4221 IPR005413 Low calcium response V antigen CH48_4222 IPR011716 Tetratricopeptide TPR-3 CH48_4222 IPR011990 Tetratricopeptide-like helical domain superfamily CH48_4222 IPR016379 Type III secretion system, low calcium response, chaperone LcrH/SycD, subgroup CH48_4222 IPR013026 Tetratricopeptide repeat-containing domain CH48_4222 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD CH48_4223 IPR006972 Secretion system effector C, SseC-like CH48_4224 IPR008898 YopD-like CH48_4225 IPR001207 Transposase, mutator type CH48_4226 IPR032674 LRR-containing bacterial E3 ligase, N-terminal CH48_4226 IPR032675 Leucine-rich repeat domain superfamily CH48_4226 IPR001611 Leucine-rich repeat CH48_4226 IPR032674 LRR-containing bacterial E3 ligase, N-terminal CH48_4226 IPR032675 Leucine-rich repeat domain superfamily CH48_4226 IPR001611 Leucine-rich repeat CH48_423 IPR001926 Pyridoxal-phosphate dependent enzyme CH48_423 IPR005858 Cysteine synthase CysM CH48_423 IPR005856 Cysteine synthase CH48_423 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CH48_423 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site CH48_4231 IPR002514 Transposase IS3/IS911family CH48_4231 IPR009057 Homeobox-like domain superfamily CH48_4232 IPR009057 Homeobox-like domain superfamily CH48_4232 IPR002514 Transposase IS3/IS911family CH48_4233 IPR010261 Tir chaperone protein (CesT) family CH48_4234 IPR038765 Papain-like cysteine peptidase superfamily CH48_4234 IPR006473 Peptidase C58, YopT-type domain CH48_4234 IPR003951 Peptidase C58, Yersinia/Haemophilus virulence surface antigen CH48_4235 IPR016505 Type III secretion system YopQ CH48_4236 IPR008874 Enterobacterial TraT complement resistance CH48_424 IPR003593 AAA+ ATPase domain CH48_424 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal CH48_424 IPR003439 ABC transporter-like CH48_424 IPR017871 ABC transporter, conserved site CH48_424 IPR005666 Sulphate transport system permease protein 1 CH48_424 IPR008995 Molybdate/tungstate binding, C-terminal CH48_424 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_425 IPR005667 Sulphate ABC transporter permease protein 2 CH48_425 IPR035906 MetI-like superfamily CH48_425 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CH48_425 IPR011866 Sulphate ABC transporter, permease protein CysW CH48_426 IPR005667 Sulphate ABC transporter permease protein 2 CH48_426 IPR035906 MetI-like superfamily CH48_426 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CH48_426 IPR011865 Sulphate ABC transporter, permease protein CysT CH48_427 IPR000957 Sulphate/thiosulphate-binding, conserved site CH48_427 IPR034408 Sulphate/thiosulphate-binding site CH48_427 IPR005669 Thiosulphate/Sulfate-binding protein CH48_428 IPR004742 Sialic acid transporter CH48_428 IPR036259 MFS transporter superfamily CH48_428 IPR020846 Major facilitator superfamily domain CH48_428 IPR011701 Major facilitator superfamily CH48_429 IPR001347 Sugar isomerase (SIS) CH48_429 IPR035472 RpiR-like, SIS domain CH48_429 IPR000281 Helix-turn-helix protein RpiR CH48_429 IPR009057 Homeobox-like domain superfamily CH48_429 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_430 IPR004375 YhcH/YjgK/YiaL family CH48_430 IPR037012 YhcH/YjgK/YiaL superfamily CH48_431 IPR000600 ROK family CH48_431 IPR023945 N-acetylmannosamine kinase, bacterial CH48_432 IPR013785 Aldolase-type TIM barrel CH48_432 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase CH48_432 IPR011060 Ribulose-phosphate binding barrel CH48_433 IPR005264 N-acetylneuraminate lyase CH48_433 IPR002220 DapA-like CH48_433 IPR013785 Aldolase-type TIM barrel CH48_433 IPR020625 Schiff base-forming aldolase, active site CH48_435 IPR006314 Dyp-type peroxidase CH48_435 IPR011008 Dimeric alpha-beta barrel CH48_436 IPR010938 Protein of unknown function DUF1131 CH48_436 IPR038714 YfeY-like superfamily CH48_437 IPR005220 Bacterial OB-fold CH48_437 IPR036700 Bacterial OB-fold superfamily CH48_437 IPR016052 Bacteriophage 933W, L0136 CH48_438 IPR016181 Acyl-CoA N-acyltransferase CH48_438 IPR000182 GNAT domain CH48_438 IPR023072 Acetyltransferase, YpeA CH48_439 IPR018375 Coproporphyrinogen III oxidase, conserved site CH48_439 IPR001260 Coproporphyrinogen III oxidase, aerobic CH48_439 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily CH48_440 IPR003791 Protein of unknown function UPF0178 CH48_441 IPR036390 Winged helix DNA-binding domain superfamily CH48_441 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_441 IPR000847 Transcription regulator HTH, LysR CH48_441 IPR037417 HTH-type transcriptional regulator SyrM, PBP2 domain CH48_441 IPR005119 LysR, substrate-binding CH48_444 IPR012302 Malic enzyme, NAD-binding CH48_444 IPR012188 NAD(P)-dependent malic enzyme CH48_444 IPR037062 Malic enzyme, N-terminal domain superfamily CH48_444 IPR012301 Malic enzyme, N-terminal domain CH48_444 IPR042113 Phosphate acetyltransferase, domain 1 CH48_444 IPR042112 Phosphate acetyltransferase, domain 2 CH48_444 IPR036291 NAD(P)-binding domain superfamily CH48_444 IPR002505 Phosphate acetyl/butaryl transferase CH48_444 IPR015884 Malic enzyme, conserved site CH48_445 IPR000086 NUDIX hydrolase domain CH48_445 IPR015797 NUDIX hydrolase-like domain superfamily CH48_445 IPR004385 Nucleoside diphosphate pyrophosphatase CH48_446 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT CH48_446 IPR038266 NapC/NirT cytochrome c superfamily CH48_446 IPR036280 Multiheme cytochrome superfamily CH48_446 IPR011031 Multihaem cytochrome CH48_446 IPR005126 NapC/NirT cytochrome c, N-terminal CH48_446 IPR024717 Denitrification system component NapC/NirT/NrfH CH48_447 IPR011031 Multihaem cytochrome CH48_447 IPR036280 Multiheme cytochrome superfamily CH48_447 IPR005591 Nitrate reductase cytochrome c-type subunit NapB CH48_448 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CH48_448 IPR010051 Periplasmic nitrate reductase, large subunit CH48_448 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site CH48_448 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CH48_448 IPR006656 Molybdopterin oxidoreductase CH48_448 IPR006311 Twin-arginine translocation pathway, signal sequence CH48_448 IPR009010 Aspartate decarboxylase-like domain superfamily CH48_448 IPR041957 Nitrate reductase NapA-like, molybdopterin-binding domain CH48_448 IPR006657 Molybdopterin dinucleotide-binding domain CH48_449 IPR005623 Chaperone NapD, nitrate reductase assembly CH48_45 IPR006037 Regulator of K+ conductance, C-terminal CH48_45 IPR006153 Cation/H+ exchanger CH48_45 IPR036318 FAD-binding, type PCMH-like superfamily CH48_45 IPR016169 FAD-binding, type PCMH, subdomain 2 CH48_45 IPR038770 Sodium/solute symporter superfamily CH48_45 IPR030151 K(+)/H(+) antiporter NhaP CH48_45 IPR023729 K(+)/H(+) antiporter NhaP2 CH48_45 IPR005170 Transporter-associated domain CH48_45 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily CH48_451 IPR000792 Transcription regulator LuxR, C-terminal CH48_451 IPR016032 Signal transduction response regulator, C-terminal effector CH48_451 IPR011006 CheY-like superfamily CH48_451 IPR001789 Signal transduction response regulator, receiver domain CH48_453 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CH48_453 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 CH48_453 IPR001036 Acriflavin resistance protein CH48_457 IPR006660 Arsenate reductase-like CH48_457 IPR036249 Thioredoxin-like superfamily CH48_457 IPR006504 Transcriptional regulator Spx/MgsR CH48_458 IPR002933 Peptidase M20 CH48_458 IPR036264 Bacterial exopeptidase dimerisation domain CH48_458 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria CH48_458 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site CH48_458 IPR011650 Peptidase M20, dimerisation domain CH48_459 IPR003709 Peptidase M15B CH48_459 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily CH48_460 IPR020910 Uncharacterised protein family UPF0370 CH48_464 IPR027385 Outer membrane protein beta-barrel domain CH48_464 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CH48_464 IPR000758 Virulence-related outer membrane protein CH48_466 IPR003346 Transposase, IS116/IS110/IS902 CH48_466 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal CH48_467 IPR004929 Spanin, inner membrane subunit CH48_469 IPR029058 Alpha/Beta hydrolase fold CH48_469 IPR003140 Phospholipase/carboxylesterase/thioesterase CH48_47 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily CH48_47 IPR000792 Transcription regulator LuxR, C-terminal CH48_47 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_47 IPR016032 Signal transduction response regulator, C-terminal effector CH48_47 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain CH48_471 IPR016181 Acyl-CoA N-acyltransferase CH48_471 IPR000182 GNAT domain CH48_471 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_471 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA CH48_471 IPR033442 tRNA(Met) cytidine acetyltransferase TmcA, tRNA-binding domain CH48_471 IPR038321 TmcA, C-terminal domain superfamily CH48_471 IPR032672 TmcA/NAT10/Kre33 CH48_471 IPR007807 Helicase domain CH48_472 IPR007382 Uncharacterised protein family UPF0756, transmembrame CH48_473 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative CH48_474 IPR028923 SAICAR synthetase/ADE2, N-terminal CH48_474 IPR033934 Bacterial and archaeal 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide synthase CH48_474 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase CH48_474 IPR018236 SAICAR synthetase, conserved site CH48_475 IPR014524 Outer membrane protein assembly factor BamC CH48_475 IPR010653 NlpB/DapX lipoprotein CH48_475 IPR042268 Outer membrane protein assembly factor BamC, C-terminal CH48_476 IPR020624 Schiff base-forming aldolase, conserved site CH48_476 IPR013785 Aldolase-type TIM barrel CH48_476 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA CH48_476 IPR020625 Schiff base-forming aldolase, active site CH48_476 IPR002220 DapA-like CH48_477 IPR016867 Glycine cleavage system transcriptional repressor CH48_477 IPR002912 ACT domain CH48_478 IPR024706 Peroxiredoxin, AhpC-type CH48_478 IPR036249 Thioredoxin-like superfamily CH48_478 IPR013766 Thioredoxin domain CH48_478 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CH48_479 IPR002549 Transmembrane protein TqsA-like CH48_48 IPR016181 Acyl-CoA N-acyltransferase CH48_48 IPR018311 Autoinducer synthesis, conserved site CH48_48 IPR001690 Autoinducer synthase CH48_480 IPR011716 Tetratricopeptide TPR-3 CH48_480 IPR030873 Beta-barrel assembly-enhancing protease CH48_480 IPR011990 Tetratricopeptide-like helical domain superfamily CH48_480 IPR001915 Peptidase M48 CH48_481 IPR006659 Arsenate reductase CH48_481 IPR036249 Thioredoxin-like superfamily CH48_481 IPR006660 Arsenate reductase-like CH48_482 IPR013317 Chromosomal replication initiator protein DnaA CH48_482 IPR020591 Chromosomal replication control, initiator DnaA-like CH48_482 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_482 IPR022864 DnaA regulatory inactivator Hda, Enterobacteriaceae CH48_482 IPR017788 DnaA regulatory inactivator Hda CH48_483 IPR006043 Xanthine/uracil/vitamin C permease CH48_483 IPR006042 Xanthine/uracil permease CH48_483 IPR029935 Uracil permease CH48_484 IPR029057 Phosphoribosyltransferase-like CH48_484 IPR034332 Uracil phosphoribosyltransferase, bacterial-type CH48_484 IPR005765 Uracil phosphoribosyl transferase CH48_484 IPR000836 Phosphoribosyltransferase domain CH48_485 IPR036676 PurM-like, C-terminal domain superfamily CH48_485 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase CH48_485 IPR036921 PurM-like, N-terminal domain superfamily CH48_485 IPR016188 PurM-like, N-terminal domain CH48_485 IPR010918 PurM-like, C-terminal domain CH48_486 IPR036477 Formyl transferase, N-terminal domain superfamily CH48_486 IPR004607 Phosphoribosylglycinamide formyltransferase CH48_486 IPR001555 Phosphoribosylglycinamide formyltransferase, active site CH48_486 IPR002376 Formyl transferase, N-terminal CH48_487 IPR000182 GNAT domain CH48_487 IPR016181 Acyl-CoA N-acyltransferase CH48_49 IPR019734 Tetratricopeptide repeat CH48_49 IPR011990 Tetratricopeptide-like helical domain superfamily CH48_49 IPR013026 Tetratricopeptide repeat-containing domain CH48_490 IPR003439 ABC transporter-like CH48_490 IPR017871 ABC transporter, conserved site CH48_490 IPR015850 ABC transporter, phosphate import, PstB CH48_490 IPR003593 AAA+ ATPase domain CH48_490 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_490 IPR005670 Phosphate transport system permease protein 1 CH48_491 IPR005672 Phosphate transport system permease protein PstA CH48_491 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CH48_491 IPR035906 MetI-like superfamily CH48_492 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CH48_492 IPR035906 MetI-like superfamily CH48_492 IPR011864 Phosphate ABC transporter, permease protein PstC CH48_493 IPR024953 Polyphosphate kinase middle domain CH48_493 IPR001736 Phospholipase D/Transphosphatidylase CH48_493 IPR025200 Polyphosphate kinase C-terminal domain 2 CH48_493 IPR036832 Polyphosphate kinase N-terminal domain superfamily CH48_493 IPR003414 Polyphosphate kinase CH48_493 IPR025198 Polyphosphate kinase N-terminal domain CH48_493 IPR036830 Polyphosphate kinase middle domain superfamily CH48_493 IPR041108 Polyphosphate kinase, C-terminal domain 1 CH48_494 IPR030673 Pyrophosphatase, GppA/Ppx-type CH48_494 IPR022371 Exopolyphosphatase CH48_494 IPR003695 Ppx/GppA phosphatase CH48_496 IPR006668 Magnesium transporter, MgtE intracellular domain CH48_496 IPR006669 Magnesium transporter MgtE CH48_496 IPR006667 SLC41 divalent cation transporters, integral membrane domain CH48_496 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily CH48_496 IPR000644 CBS domain CH48_496 IPR038076 MgtE, N-terminal domain superfamily CH48_496 IPR038048 Magnesium transporter MgtE, transmembrane domain CH48_497 IPR013656 PAS fold-4 CH48_497 IPR001633 EAL domain CH48_497 IPR000160 GGDEF domain CH48_497 IPR007895 MASE1 CH48_497 IPR029787 Nucleotide cyclase CH48_497 IPR001610 PAC motif CH48_497 IPR000014 PAS domain CH48_497 IPR000700 PAS-associated, C-terminal CH48_497 IPR013655 PAS fold-3 CH48_497 IPR035965 PAS domain superfamily CH48_497 IPR035919 EAL domain superfamily CH48_498 IPR018181 Heat shock protein 70, conserved site CH48_498 IPR013126 Heat shock protein 70 family CH48_498 IPR042054 YegD-like CH48_5 IPR024925 Malonyl CoA-acyl carrier protein transacylase CH48_5 IPR001227 Acyl transferase domain superfamily CH48_5 IPR014043 Acyl transferase CH48_5 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding CH48_5 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type CH48_5 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CH48_50 IPR005616 CcmH/CycL/Ccl2/NrfF family CH48_50 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily CH48_50 IPR017565 Formate-dependent nitrite reductase complex, subunit NrfF CH48_500 IPR006143 RND efflux pump, membrane fusion protein CH48_500 IPR039562 Membrane fusion protein, biotin-lipoyl like domain CH48_500 IPR022824 Multidrug resistance protein MdtA CH48_501 IPR022831 Multidrug resistance protein MdtB CH48_501 IPR001036 Acriflavin resistance protein CH48_501 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CH48_502 IPR023931 Multidrug resistance protein MdtC CH48_502 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CH48_502 IPR001036 Acriflavin resistance protein CH48_504 IPR036259 MFS transporter superfamily CH48_504 IPR023721 Multidrug resistance protein MdtD CH48_504 IPR011701 Major facilitator superfamily CH48_504 IPR020846 Major facilitator superfamily domain CH48_505 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CH48_505 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CH48_505 IPR005467 Histidine kinase domain CH48_505 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH48_505 IPR003594 Histidine kinase/HSP90-like ATPase CH48_505 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CH48_505 IPR003660 HAMP domain CH48_506 IPR016032 Signal transduction response regulator, C-terminal effector CH48_506 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_506 IPR011006 CheY-like superfamily CH48_506 IPR039420 Transcriptional regulatory protein WalR-like CH48_506 IPR001867 OmpR/PhoB-type DNA-binding domain CH48_506 IPR001789 Signal transduction response regulator, receiver domain CH48_507 IPR036913 YegP-like superfamily CH48_507 IPR010879 Domain of unknown function DUF1508 CH48_509 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily CH48_509 IPR022433 Lipid kinase YegS CH48_509 IPR001206 Diacylglycerol kinase, catalytic domain CH48_509 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal CH48_509 IPR005218 Diacylglycerol/lipid kinase CH48_51 IPR013766 Thioredoxin domain CH48_51 IPR036249 Thioredoxin-like superfamily CH48_51 IPR013740 Redoxin CH48_51 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE CH48_51 IPR017937 Thioredoxin, conserved site CH48_510 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor CH48_511 IPR011618 Sorbitol phosphotransferase enzyme II, N-terminal CH48_511 IPR011638 Sorbitol phosphotransferase enzyme II, C-terminal CH48_511 IPR004702 Phosphotransferease, sorbitol phosphotransferase enzyme II CH48_512 IPR036665 Phosphotransferase system, glucitol/sorbitol-specific IIA component superfamily CH48_512 IPR018454 Phosphotransferase system, glucitol/sorbitol-specific IIA component, subgroup CH48_512 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component CH48_513 IPR002347 Short-chain dehydrogenase/reductase SDR CH48_513 IPR020904 Short-chain dehydrogenase/reductase, conserved site CH48_513 IPR036291 NAD(P)-binding domain superfamily CH48_514 IPR009693 Glucitol operon activator CH48_515 IPR037171 NagB/RpiA transferase-like CH48_515 IPR001034 DeoR-type HTH domain CH48_515 IPR014036 DeoR C-terminal sensor domain CH48_515 IPR018356 Transcription regulator, HTH DeoR-type, conserved site CH48_515 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_515 IPR036390 Winged helix DNA-binding domain superfamily CH48_516 IPR000644 CBS domain CH48_516 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type CH48_516 IPR001347 Sugar isomerase (SIS) CH48_516 IPR035474 KpsF-like, SIS domain CH48_517 IPR036501 Inhibitor of vertebrate lysozyme superfamily CH48_517 IPR014453 Inhibitor of vertebrate lysozyme CH48_52 IPR003567 Cytochrome c-type biogenesis protein CH48_52 IPR003570 Cytochrome c-type biogenesis protein NrfE CH48_52 IPR017563 Cytochrome c nitrate reductase biogenesis protein NrfE CH48_52 IPR002541 Cytochrome c assembly protein CH48_52 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal CH48_52 IPR003568 Cytochrome c-type biogenesis protein CcmF CH48_520 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase CH48_520 IPR029056 Ribokinase-like CH48_520 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase CH48_523 IPR008168 Cytochrome c, class IC CH48_523 IPR036909 Cytochrome c-like domain superfamily CH48_523 IPR009056 Cytochrome c-like domain CH48_523 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit CH48_524 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal CH48_524 IPR036188 FAD/NAD(P)-binding domain superfamily CH48_524 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal CH48_527 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH48_527 IPR022310 NAD/GMP synthase CH48_527 IPR022955 GMP synthase CH48_527 IPR004739 GMP synthase, glutamine amidotransferase CH48_527 IPR017926 Glutamine amidotransferase CH48_527 IPR025777 GMP synthetase ATP pyrophosphatase domain CH48_527 IPR001674 GMP synthase, C-terminal CH48_527 IPR029062 Class I glutamine amidotransferase-like CH48_528 IPR001093 IMP dehydrogenase/GMP reductase CH48_528 IPR015875 IMP dehydrogenase / GMP reductase, conserved site CH48_528 IPR005990 Inosine-5'-monophosphate dehydrogenase CH48_528 IPR000644 CBS domain CH48_528 IPR013785 Aldolase-type TIM barrel CH48_529 IPR003753 Exonuclease VII, large subunit CH48_529 IPR020579 Exonuclease VII, large subunit, C-terminal CH48_529 IPR025824 OB-fold nucleic acid binding domain CH48_53 IPR017566 NrfD CH48_53 IPR005614 NrfD family CH48_530 IPR010807 Protein of unknown function DUF1407 CH48_530 IPR029037 YfgJ-like CH48_533 IPR005225 Small GTP-binding protein domain CH48_533 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_533 IPR015946 K homology domain-like, alpha/beta CH48_533 IPR016484 GTP-binding protein EngA CH48_533 IPR006073 GTP binding domain CH48_533 IPR031166 EngA-type guanine nucleotide-binding (G) domain CH48_533 IPR032859 GTPase Der, C-terminal KH-domain-like CH48_534 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CH48_534 IPR015943 WD40/YVTN repeat-like-containing domain superfamily CH48_534 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CH48_534 IPR017687 Outer membrane protein assembly factor BamB CH48_534 IPR002372 Pyrrolo-quinoline quinone repeat CH48_535 IPR018704 Tetratricopeptide repeat-like domain CH48_535 IPR026039 Uncharacterised protein family UPF0070 CH48_535 IPR011990 Tetratricopeptide-like helical domain superfamily CH48_536 IPR036621 Anticodon-binding domain superfamily CH48_536 IPR033656 Histidyl-anticodon-binding CH48_536 IPR015807 Histidine-tRNA ligase CH48_536 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit CH48_536 IPR006195 Aminoacyl-tRNA synthetase, class II CH48_536 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain CH48_536 IPR004154 Anticodon-binding CH48_537 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial CH48_537 IPR011005 Dihydropteroate synthase-like CH48_537 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type CH48_538 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CH48_538 IPR001387 Cro/C1-type helix-turn-helix domain CH48_538 IPR023690 Cytoskeleton protein RodZ CH48_538 IPR025194 Domain of unknown function DUF4115 CH48_54 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CH48_54 IPR006311 Twin-arginine translocation pathway, signal sequence CH48_54 IPR017567 Cytochrome c nitrite reductase, Fe-S protein CH48_54 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CH48_54 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CH48_540 IPR040072 Methyltransferase (Class A) CH48_540 IPR027492 Dual-specificity RNA methyltransferase RlmN CH48_540 IPR013785 Aldolase-type TIM barrel CH48_540 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr CH48_540 IPR007197 Radical SAM CH48_541 IPR023005 Nucleoside diphosphate kinase, active site CH48_541 IPR001564 Nucleoside diphosphate kinase CH48_541 IPR036850 Nucleoside diphosphate kinase-like domain superfamily CH48_541 IPR034907 Nucleoside diphosphate kinase-like domain CH48_543 IPR001264 Glycosyl transferase, family 51 CH48_543 IPR009647 Penicillin-binding, C-terminal CH48_543 IPR036950 Penicillin binding protein transglycosylase domain CH48_543 IPR001460 Penicillin-binding protein, transpeptidase CH48_543 IPR012338 Beta-lactamase/transpeptidase-like CH48_543 IPR011815 Penicillin-binding protein 1C CH48_543 IPR023346 Lysozyme-like domain superfamily CH48_544 IPR041203 Bacterial Alpha-2-macroglobulin, MG5 domain CH48_544 IPR021868 Alpha-2-macroglobulin MG3 domain CH48_544 IPR041246 Bacterial alpha-2-macroglobulin MG10 domain CH48_544 IPR002890 Macroglobulin domain CH48_544 IPR026284 Alpha-2-macroglobulin, bacteria CH48_544 IPR011625 Alpha-2-macroglobulin, bait region domain CH48_544 IPR001599 Alpha-2-macroglobulin CH48_544 IPR040639 Alpha-2-macroglobulin, MG1 domain CH48_544 IPR011626 Alpha-macroglobulin-like, TED domain CH48_544 IPR041462 Bacterial Alpha-2-macroglobulin, MG6 domain CH48_544 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid CH48_546 IPR003991 Pertactin virulence factor family CH48_546 IPR030930 Adhesin of bacterial autotransporter system CH48_546 IPR005546 Autotransporter beta-domain CH48_546 IPR004899 Pertactin, central region CH48_546 IPR012332 P22 tailspike-like, C-terminal domain superfamily CH48_546 IPR006315 Outer membrane autotransporter barrel CH48_546 IPR036709 Autotransporter beta-domain superfamily CH48_546 IPR011050 Pectin lyase fold/virulence factor CH48_547 IPR027945 SseB protein, C-terminal CH48_547 IPR009839 SseB protein N-terminal domain CH48_548 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B CH48_548 IPR001346 Interferon regulatory factor DNA-binding domain CH48_548 IPR008330 Peptidase M17, peptidase B CH48_548 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal CH48_549 IPR036762 IscX-like superfamily CH48_549 IPR007479 ISC system FeS cluster assembly, IscX CH48_55 IPR036280 Multiheme cytochrome superfamily CH48_55 IPR023155 Cytochrome c-552/4 CH48_55 IPR017564 Cytochrome c nitrite reductase, pentahaem subunit CH48_55 IPR011031 Multihaem cytochrome CH48_55 IPR010177 Doubled CXXCH motif CH48_550 IPR001055 Adrenodoxin CH48_550 IPR018298 Adrenodoxin, iron-sulphur binding site CH48_550 IPR012675 Beta-grasp domain superfamily CH48_550 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria CH48_550 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CH48_550 IPR036010 2Fe-2S ferredoxin-like superfamily CH48_551 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily CH48_551 IPR042039 HscA chaperone, nucleotide-binding domain CH48_551 IPR013126 Heat shock protein 70 family CH48_551 IPR010236 ISC system FeS cluster assembly, HscA chaperone CH48_551 IPR018181 Heat shock protein 70, conserved site CH48_551 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily CH48_552 IPR001623 DnaJ domain CH48_552 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain CH48_552 IPR004640 Co-chaperone Hsc20 CH48_552 IPR036869 Chaperone J-domain superfamily CH48_552 IPR036386 HscB, C-terminal domain superfamily CH48_553 IPR000361 FeS cluster biogenesis CH48_553 IPR016092 FeS cluster insertion protein CH48_553 IPR035903 HesB-like domain superfamily CH48_553 IPR017870 FeS cluster insertion, C-terminal, conserved site CH48_553 IPR011302 Iron-binding protein IscA, proteobacteria CH48_554 IPR011339 ISC system FeS cluster assembly, IscU scaffold CH48_554 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal CH48_555 IPR016454 Cysteine desulfurase CH48_555 IPR000192 Aminotransferase class V domain CH48_555 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CH48_555 IPR015424 Pyridoxal phosphate-dependent transferase CH48_555 IPR010240 Cysteine desulfurase IscS CH48_555 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CH48_555 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CH48_556 IPR000944 Transcription regulator Rrf2-type CH48_556 IPR010242 Transcription factor HTH, IscR CH48_556 IPR030489 Transcription regulator Rrf2-type, conserved site CH48_556 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_556 IPR036390 Winged helix DNA-binding domain superfamily CH48_557 IPR029028 Alpha/beta knot methyltransferases CH48_557 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CH48_557 IPR004384 RNA methyltransferase TrmJ/LasT CH48_557 IPR001537 tRNA/rRNA methyltransferase, SpoU type CH48_558 IPR022337 Inositol monophosphatase, SuhB CH48_558 IPR000760 Inositol monophosphatase-like CH48_558 IPR020550 Inositol monophosphatase, conserved site CH48_558 IPR020583 Inositol monophosphatase, metal-binding site CH48_558 IPR033942 Inositol monophosphatase CH48_559 IPR011541 Nickel/cobalt transporter, high-affinity CH48_56 IPR036280 Multiheme cytochrome superfamily CH48_56 IPR011031 Multihaem cytochrome CH48_56 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit CH48_56 IPR003321 Cytochrome c552 CH48_560 IPR016537 Uncharacterised conserved protein UCP008159, CH48_560 IPR010412 Protein of unknown function DUF1007 CH48_561 IPR024989 Major facilitator superfamily associated domain CH48_561 IPR026032 Probable 3-phenylpropionic acid transporter CH48_561 IPR036259 MFS transporter superfamily CH48_562 IPR036634 PRD domain superfamily CH48_562 IPR011608 PRD domain CH48_563 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site CH48_563 IPR015424 Pyridoxal phosphate-dependent transferase CH48_563 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CH48_563 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CH48_563 IPR001085 Serine hydroxymethyltransferase CH48_563 IPR039429 Serine hydroxymethyltransferase-like domain CH48_564 IPR009050 Globin-like superfamily CH48_564 IPR017938 Riboflavin synthase-like beta-barrel CH48_564 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain CH48_564 IPR001433 Oxidoreductase FAD/NAD(P)-binding CH48_564 IPR000971 Globin CH48_564 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CH48_564 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase CH48_564 IPR017927 FAD-binding domain, ferredoxin reductase-type CH48_564 IPR023950 Flavohemoprotein CH48_564 IPR012292 Globin/Protoglobin CH48_567 IPR036634 PRD domain superfamily CH48_567 IPR011608 PRD domain CH48_568 IPR029066 PLP-binding barrel CH48_568 IPR001608 Alanine racemase, N-terminal CH48_569 IPR032466 Metal-dependent hydrolase CH48_569 IPR001559 Phosphotriesterase CH48_569 IPR017947 Aryldialkylphosphatase, zinc-binding site CH48_570 IPR021238 Protein of unknown function DUF2620 CH48_571 IPR019733 Uncharacterised protein family YhfT CH48_572 IPR002187 Nitrogen regulatory protein PII CH48_572 IPR002332 Nitrogen regulatory protein P-II, urydylation site CH48_572 IPR017918 Nitrogen regulatory protein PII, conserved site CH48_572 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CH48_572 IPR011322 Nitrogen regulatory PII-like, alpha/beta CH48_573 IPR014445 Glutamine-dependent NAD(+) synthetase CH48_573 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH48_573 IPR000132 Nitrilase/cyanide hydratase, conserved site CH48_573 IPR036526 Carbon-nitrogen hydrolase superfamily CH48_573 IPR003694 NAD(+) synthetase CH48_573 IPR022310 NAD/GMP synthase CH48_573 IPR003010 Carbon-nitrogen hydrolase CH48_574 IPR025944 Sigma-54 interaction domain, conserved site CH48_574 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CH48_574 IPR009057 Homeobox-like domain superfamily CH48_574 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CH48_574 IPR003593 AAA+ ATPase domain CH48_574 IPR002078 RNA polymerase sigma factor 54 interaction domain CH48_574 IPR001789 Signal transduction response regulator, receiver domain CH48_574 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_574 IPR011006 CheY-like superfamily CH48_575 IPR025262 Quorum-sensing regulator protein G CH48_576 IPR005467 Histidine kinase domain CH48_576 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CH48_576 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CH48_576 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH48_576 IPR003594 Histidine kinase/HSP90-like ATPase CH48_576 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CH48_578 IPR029062 Class I glutamine amidotransferase-like CH48_578 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily CH48_578 IPR017926 Glutamine amidotransferase CH48_578 IPR036921 PurM-like, N-terminal domain superfamily CH48_578 IPR040707 Phosphoribosylformylglycinamidine synthase, N-terminal CH48_578 IPR036676 PurM-like, C-terminal domain superfamily CH48_578 IPR010918 PurM-like, C-terminal domain CH48_578 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain CH48_578 IPR010073 Phosphoribosylformylglycinamidine synthase PurL CH48_579 IPR008258 Transglycosylase SLT domain 1 CH48_579 IPR000189 Prokaryotic transglycosylase, active site CH48_579 IPR023703 Membrane-bound lytic murein transglycosylase F CH48_579 IPR023346 Lysozyme-like domain superfamily CH48_579 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CH48_58 IPR042072 DsrC-like protein, C-terminal domain CH48_58 IPR007453 Sulphur transfer protein DsrC/TusE CH48_58 IPR025526 DsrC-like domain superfamily CH48_580 IPR016193 Cytidine deaminase-like CH48_580 IPR016192 APOBEC/CMP deaminase, zinc-binding CH48_580 IPR002125 Cytidine and deoxycytidylate deaminase domain CH48_580 IPR028883 tRNA-specific adenosine deaminase CH48_582 IPR023214 HAD superfamily CH48_582 IPR006435 HAD-superfamily hydrolase, subfamily IF, YfhB CH48_582 IPR036412 HAD-like superfamily CH48_583 IPR009060 UBA-like superfamily CH48_583 IPR001347 Sugar isomerase (SIS) CH48_583 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ CH48_583 IPR040190 N-acetylmuramic acid 6-phosphate etherase/glucokinase regulatory protein CH48_583 IPR005486 Glucokinase regulatory protein, conserved site CH48_584 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_584 IPR001347 Sugar isomerase (SIS) CH48_584 IPR035472 RpiR-like, SIS domain CH48_584 IPR009057 Homeobox-like domain superfamily CH48_584 IPR000281 Helix-turn-helix protein RpiR CH48_585 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CH48_585 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CH48_586 IPR003474 Gluconate transporter CH48_587 IPR004568 Phosphopantetheine-protein transferase domain CH48_587 IPR002582 Holo-[acyl carrier protein] synthase CH48_587 IPR037143 4'-phosphopantetheinyl transferase domain superfamily CH48_587 IPR008278 4'-phosphopantetheinyl transferase domain CH48_588 IPR036130 Pyridoxine 5'-phosphate synthase CH48_588 IPR013785 Aldolase-type TIM barrel CH48_588 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ CH48_589 IPR037278 ARFGAP/RecO-like zinc finger CH48_589 IPR022572 DNA replication/recombination mediator RecO, N-terminal CH48_589 IPR003717 Recombination protein O, RecO CH48_589 IPR012340 Nucleic acid-binding, OB-fold CH48_59 IPR017968 Acylphosphatase, conserved site CH48_59 IPR001792 Acylphosphatase-like domain CH48_59 IPR020456 Acylphosphatase CH48_59 IPR028627 Acylphosphatase, bacteria CH48_59 IPR036046 Acylphosphatase-like domain superfamily CH48_590 IPR006073 GTP binding domain CH48_590 IPR030388 Era-type guanine nucleotide-binding (G) domain CH48_590 IPR009019 K homology domain superfamily, prokaryotic type CH48_590 IPR005662 GTP-binding protein Era CH48_590 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_590 IPR004044 K Homology domain, type 2 CH48_590 IPR005225 Small GTP-binding protein domain CH48_590 IPR015946 K homology domain-like, alpha/beta CH48_591 IPR000999 Ribonuclease III domain CH48_591 IPR014720 Double-stranded RNA-binding domain CH48_591 IPR036389 Ribonuclease III, endonuclease domain superfamily CH48_591 IPR011907 Ribonuclease III CH48_592 IPR019533 Peptidase S26 CH48_592 IPR036286 LexA/Signal peptidase-like superfamily CH48_592 IPR019758 Peptidase S26A, signal peptidase I, conserved site CH48_592 IPR000223 Peptidase S26A, signal peptidase I CH48_592 IPR019756 Peptidase S26A, signal peptidase I, serine active site CH48_592 IPR019757 Peptidase S26A, signal peptidase I, lysine active site CH48_593 IPR031157 Tr-type G domain, conserved site CH48_593 IPR004161 Translation elongation factor EFTu-like, domain 2 CH48_593 IPR038363 LepA, C-terminal domain superfamily CH48_593 IPR000640 Elongation factor EFG, domain V-like CH48_593 IPR006297 Elongation factor 4 CH48_593 IPR035647 EF-G domain III/V-like CH48_593 IPR013842 GTP-binding protein LepA, C-terminal CH48_593 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_593 IPR000795 Transcription factor, GTP-binding domain CH48_593 IPR005225 Small GTP-binding protein domain CH48_593 IPR035654 Elongation factor 4, domain IV CH48_595 IPR007359 Positive regulator of sigma(E), RseC/MucC CH48_595 IPR026268 Protein RseC CH48_596 IPR005588 MucB/RseB CH48_596 IPR033436 MucB/RseB, C-terminal CH48_596 IPR038484 MucB/RseB, C-terminal domain superfamily CH48_596 IPR033434 MucB/RseB, N-terminal CH48_597 IPR026279 Sigma-E factor negative regulatory protein RseA CH48_597 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily CH48_597 IPR005572 Anti sigma-E protein RseA, N-terminal CH48_597 IPR005573 Anti sigma-E protein RseA, C-terminal CH48_598 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site CH48_598 IPR013324 RNA polymerase sigma factor, region 3/4-like CH48_598 IPR013325 RNA polymerase sigma factor, region 2 CH48_598 IPR039425 RNA polymerase sigma-70 like CH48_598 IPR014284 RNA polymerase sigma-70 like domain CH48_598 IPR014286 RNA polymerase sigma-70 RpoE type CH48_598 IPR007627 RNA polymerase sigma-70 region 2 CH48_598 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CH48_598 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_599 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily CH48_599 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain CH48_599 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal CH48_599 IPR005288 L-aspartate oxidase CH48_599 IPR036188 FAD/NAD(P)-binding domain superfamily CH48_599 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily CH48_6 IPR016039 Thiolase-like CH48_6 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 CH48_6 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CH48_6 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal CH48_600 IPR007848 Methyltransferase small domain CH48_600 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH48_600 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase CH48_600 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CH48_601 IPR014014 RNA helicase, DEAD-box type, Q motif CH48_601 IPR011545 DEAD/DEAH box helicase domain CH48_601 IPR028621 ATP-dependent RNA helicase SrmB CH48_601 IPR014001 Helicase superfamily 1/2, ATP-binding domain CH48_601 IPR001650 Helicase, C-terminal CH48_601 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_601 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CH48_602 IPR003346 Transposase, IS116/IS110/IS902 CH48_602 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal CH48_604 IPR002110 Ankyrin repeat CH48_604 IPR020683 Ankyrin repeat-containing domain CH48_604 IPR036770 Ankyrin repeat-containing domain superfamily CH48_605 IPR029058 Alpha/Beta hydrolase fold CH48_607 IPR011140 Autonomous glycyl radical cofactor GrcA CH48_607 IPR001150 Glycine radical domain CH48_607 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CH48_608 IPR036895 Uracil-DNA glycosylase-like domain superfamily CH48_608 IPR005122 Uracil-DNA glycosylase-like CH48_608 IPR018085 Uracil-DNA glycosylase, active site CH48_608 IPR002043 Uracil-DNA glycosylase family 1 CH48_609 IPR000740 GrpE nucleotide exchange factor CH48_609 IPR009012 GrpE nucleotide exchange factor, head CH48_609 IPR013805 GrpE nucleotide exchange factor, coiled-coil CH48_610 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal CH48_610 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily CH48_610 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal CH48_610 IPR002504 NAD kinase CH48_611 IPR004604 DNA recombination/repair protein RecN CH48_611 IPR003395 RecF/RecN/SMC, N-terminal CH48_611 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_612 IPR026592 Outer membrane protein assembly factor BamE CH48_612 IPR037873 BamE-like CH48_612 IPR007450 Lipoprotein SmpA/OmlA CH48_613 IPR037021 RnfH superfamily CH48_613 IPR005346 RnfH protein CH48_613 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CH48_615 IPR005031 Coenzyme Q-binding protein COQ10, START domain CH48_615 IPR023393 START-like domain superfamily CH48_616 IPR000037 SsrA-binding protein CH48_616 IPR023620 Small protein B CH48_616 IPR020081 SsrA-binding protein, conserved site CH48_617 IPR011010 DNA breaking-rejoining enzyme, catalytic core CH48_617 IPR038488 Integrase, DNA-binding domain superfamily CH48_617 IPR013762 Integrase-like, catalytic domain superfamily CH48_617 IPR025166 Integrase, DNA-binding domain CH48_617 IPR010998 Integrase/recombinase, N-terminal CH48_617 IPR002104 Integrase, catalytic domain CH48_62 IPR015947 PUA-like superfamily CH48_62 IPR002478 PUA domain CH48_62 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH48_62 IPR019614 S-adenosylmethionine-dependent methyltransferase CH48_62 IPR023542 rRNA large subunit methyltransferase I CH48_62 IPR041532 RlmI, PUA-like domain CH48_62 IPR036974 PUA domain superfamily CH48_621 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH48_621 IPR001525 C-5 cytosine methyltransferase CH48_621 IPR018117 DNA methylase, C-5 cytosine-specific, active site CH48_622 IPR029017 Enolase-like, N-terminal CH48_622 IPR007001 Bacterial shufflon protein, N-terminal CH48_626 IPR041533 Bartonella effector protein, BID domain CH48_626 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_626 IPR014136 Ti-type conjugative transfer relaxase TraA CH48_626 IPR027351 (+) RNA virus helicase core domain CH48_626 IPR005053 MobA/MobL protein CH48_627 IPR001270 ClpA/B family CH48_627 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CH48_627 IPR002611 IstB-like ATP-binding protein CH48_627 IPR003593 AAA+ ATPase domain CH48_627 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_628 IPR001584 Integrase, catalytic core CH48_628 IPR017894 HTH domain, IS21 transposase-type CH48_63 IPR022866 Heat shock protein HspQ CH48_63 IPR036623 Hemimethylated DNA-binding domain superfamily CH48_63 IPR011722 Hemimethylated DNA-binding domain CH48_630 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria CH48_630 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CH48_630 IPR006879 Carbohydrate deacetylase YdjC-like CH48_631 IPR020449 Transcription regulator HTH, AraC- type CH48_631 IPR014710 RmlC-like jelly roll fold CH48_631 IPR011051 RmlC-like cupin domain superfamily CH48_631 IPR018062 HTH domain AraC-type, conserved site CH48_631 IPR018060 DNA binding HTH domain, AraC-type CH48_631 IPR009057 Homeobox-like domain superfamily CH48_631 IPR013096 Cupin 2, conserved barrel CH48_632 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit CH48_632 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily CH48_633 IPR001360 Glycoside hydrolase family 1 CH48_633 IPR017853 Glycoside hydrolase superfamily CH48_633 IPR018120 Glycoside hydrolase family 1, active site CH48_634 IPR004501 Phosphotransferase system, EIIC component, type 3 CH48_634 IPR004796 Phosphotransferase system, cellobiose-type IIC component CH48_634 IPR003352 Phosphotransferase system, EIIC CH48_635 IPR013012 Phosphotransferase system, EIIB component, type 3 CH48_635 IPR003501 Phosphotransferase system, EIIB component, type 2/3 CH48_635 IPR036095 PTS system IIB component-like superfamily CH48_636 IPR012938 Glucose/Sorbosone dehydrogenase CH48_636 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase CH48_636 IPR011042 Six-bladed beta-propeller, TolB-like CH48_638 IPR023210 NADP-dependent oxidoreductase domain CH48_638 IPR036812 NADP-dependent oxidoreductase domain superfamily CH48_64 IPR003781 CoA-binding CH48_64 IPR036291 NAD(P)-binding domain superfamily CH48_640 IPR003691 Putative fluoride ion transporter CrcB CH48_641 IPR003691 Putative fluoride ion transporter CrcB CH48_642 IPR003148 Regulator of K+ conductance, N-terminal CH48_642 IPR036291 NAD(P)-binding domain superfamily CH48_642 IPR013099 Potassium channel domain CH48_643 IPR010486 HNS-dependent expression A/B CH48_643 IPR038303 HNS-dependent expression A/B superfamily CH48_643 IPR028623 HNS-dependent expression B CH48_644 IPR004688 Transition metal uptake transporter nickel/cobalt CH48_644 IPR011541 Nickel/cobalt transporter, high-affinity CH48_645 IPR029020 Ammonium/urea transporter CH48_645 IPR004937 Urea transporter CH48_646 IPR002669 Urease accessory protein UreD CH48_647 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_647 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CH48_647 IPR004400 Urease accessory protein UreG CH48_648 IPR038277 UreF domain superfamily CH48_648 IPR002639 Urease accessory protein UreF CH48_649 IPR012406 Urease accessory protein UreE CH48_649 IPR007864 Urease accessory protein UreE, C-terminal domain CH48_649 IPR004029 UreE urease accessory, N-terminal CH48_649 IPR036118 UreE urease accessory, N-terminal domain superfamily CH48_65 IPR018635 Uncharacterised protein family UPF0319 CH48_650 IPR005848 Urease, alpha subunit CH48_650 IPR017951 Urease alpha subunit, C-terminal CH48_650 IPR006680 Amidohydrolase-related CH48_650 IPR011059 Metal-dependent hydrolase, composite domain superfamily CH48_650 IPR032466 Metal-dependent hydrolase CH48_650 IPR011612 Urease alpha-subunit, N-terminal domain CH48_650 IPR017950 Urease active site CH48_650 IPR029754 Urease nickel binding site CH48_651 IPR036461 Urease, beta subunit superfamily CH48_651 IPR002019 Urease, beta subunit CH48_652 IPR036463 Urease, gamma subunit superfamily CH48_652 IPR002026 Urease, gamma/gamma-beta subunit CH48_652 IPR012010 Urease, gamma subunit CH48_653 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_653 IPR015858 ABC transporter, nickel import, NikE CH48_653 IPR014137 Nickel import ATP-binding protein NikE CH48_653 IPR003593 AAA+ ATPase domain CH48_653 IPR017871 ABC transporter, conserved site CH48_653 IPR003439 ABC transporter-like CH48_654 IPR014138 Nickel import ATP-binding protein NikD CH48_654 IPR015857 ABC transporter, nickel import, NikD CH48_654 IPR017871 ABC transporter, conserved site CH48_654 IPR003439 ABC transporter-like CH48_654 IPR003593 AAA+ ATPase domain CH48_654 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_655 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CH48_655 IPR035906 MetI-like superfamily CH48_655 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CH48_656 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CH48_656 IPR035906 MetI-like superfamily CH48_657 IPR030678 Peptide/nickel binding protein, MppA-type CH48_657 IPR039424 Solute-binding protein family 5 CH48_657 IPR000914 Solute-binding protein family 5 domain CH48_657 IPR023765 Solute-binding protein family 5, conserved site CH48_66 IPR004363 Methylglyoxal synthase CH48_66 IPR018148 Methylglyoxal synthase, active site CH48_66 IPR036914 Methylglyoxal synthase-like domain superfamily CH48_66 IPR011607 Methylglyoxal synthase-like domain CH48_662 IPR019844 Cold-shock (CSD) domain CH48_662 IPR002059 Cold-shock protein, DNA-binding CH48_662 IPR012340 Nucleic acid-binding, OB-fold CH48_662 IPR011129 Cold shock domain CH48_662 IPR012156 Cold shock, CspA CH48_665 IPR018994 Protein of unknown function DUF2002 CH48_666 IPR020846 Major facilitator superfamily domain CH48_666 IPR036259 MFS transporter superfamily CH48_666 IPR023008 Uncharacterized MFS-type transporter YhhS-like CH48_666 IPR011701 Major facilitator superfamily CH48_667 IPR018062 HTH domain AraC-type, conserved site CH48_667 IPR018060 DNA binding HTH domain, AraC-type CH48_667 IPR009057 Homeobox-like domain superfamily CH48_67 IPR034739 UvrD/AddA helicase, N-terminal CH48_67 IPR000212 DNA helicase, UvrD/REP type CH48_67 IPR014017 UvrD-like DNA helicase, C-terminal CH48_67 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_67 IPR014016 UvrD-like helicase, ATP-binding domain CH48_67 IPR022161 DNA helicase IV, N-terminal domain CH48_670 IPR023497 Acid shock protein CH48_670 IPR009435 Acid shock CH48_671 IPR010279 Inner membrane protein YqjD/ElaB CH48_672 IPR036390 Winged helix DNA-binding domain superfamily CH48_672 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_672 IPR015424 Pyridoxal phosphate-dependent transferase CH48_672 IPR004839 Aminotransferase, class I/classII CH48_672 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CH48_672 IPR000524 Transcription regulator HTH, GntR CH48_673 IPR004675 Alkylhydroperoxidase AhpD core CH48_673 IPR029032 AhpD-like CH48_673 IPR003779 Carboxymuconolactone decarboxylase-like CH48_675 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial CH48_675 IPR004465 Ribonucleotide reductase Class Ib, NrdI CH48_675 IPR029039 Flavoprotein-like superfamily CH48_676 IPR000788 Ribonucleotide reductase large subunit, C-terminal CH48_676 IPR039718 Ribonucleoside-diphosphate reductase large subunit CH48_676 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal CH48_676 IPR013554 Ribonucleotide reductase N-terminal CH48_676 IPR013509 Ribonucleotide reductase large subunit, N-terminal CH48_676 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE CH48_676 IPR013346 Ribonucleotide reductase, class I , alpha subunit CH48_677 IPR030475 Ribonucleotide reductase small subunit, acitve site CH48_677 IPR000358 Ribonucleotide reductase small subunit family CH48_677 IPR009078 Ferritin-like superfamily CH48_677 IPR033909 Ribonucleotide reductase small subunit CH48_677 IPR026494 Ribonucleoside reductase subunit beta, NrdF CH48_677 IPR012348 Ribonucleotide reductase-like CH48_678 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_678 IPR017871 ABC transporter, conserved site CH48_678 IPR005892 Glycine betaine transport ATP-binding subunit CH48_678 IPR003439 ABC transporter-like CH48_678 IPR003593 AAA+ ATPase domain CH48_678 IPR000644 CBS domain CH48_679 IPR035906 MetI-like superfamily CH48_679 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CH48_68 IPR031308 Uncharacterised conserved protein UCP028777 CH48_68 IPR005185 Inner membrane component domain CH48_680 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain CH48_682 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain CH48_682 IPR006309 DNA polymerase 3, epsilon subunit CH48_682 IPR013520 Exonuclease, RNase T/DNA polymerase III CH48_682 IPR012337 Ribonuclease H-like superfamily CH48_682 IPR036397 Ribonuclease H superfamily CH48_683 IPR022892 Ribonuclease HI CH48_683 IPR036397 Ribonuclease H superfamily CH48_683 IPR012337 Ribonuclease H-like superfamily CH48_683 IPR002156 Ribonuclease H domain CH48_684 IPR026669 Arsenite methyltransferase-like CH48_684 IPR013216 Methyltransferase type 11 CH48_684 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH48_685 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CH48_685 IPR001279 Metallo-beta-lactamase CH48_685 IPR017782 Hydroxyacylglutathione hydrolase CH48_685 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain CH48_685 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain CH48_686 IPR023346 Lysozyme-like domain superfamily CH48_686 IPR036779 LysM domain superfamily CH48_686 IPR000189 Prokaryotic transglycosylase, active site CH48_686 IPR018392 LysM domain CH48_686 IPR008258 Transglycosylase SLT domain 1 CH48_687 IPR003346 Transposase, IS116/IS110/IS902 CH48_687 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal CH48_688 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal CH48_688 IPR003346 Transposase, IS116/IS110/IS902 CH48_689 IPR005135 Endonuclease/exonuclease/phosphatase CH48_689 IPR036691 Endonuclease/exonuclease/phosphatase superfamily CH48_689 IPR022958 Uncharacterised protein family UPF0294 CH48_69 IPR010020 Integral membrane protein, YccS/YhfK CH48_69 IPR032692 Integral membrane protein YccS, N-terminal CH48_69 IPR010019 Integral membrane protein, YccS CH48_690 IPR036259 MFS transporter superfamily CH48_690 IPR011701 Major facilitator superfamily CH48_690 IPR020846 Major facilitator superfamily domain CH48_691 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_691 IPR000847 Transcription regulator HTH, LysR CH48_691 IPR036390 Winged helix DNA-binding domain superfamily CH48_691 IPR005119 LysR, substrate-binding CH48_692 IPR018170 Aldo/keto reductase, conserved site CH48_692 IPR020471 Aldo/keto reductase CH48_692 IPR023210 NADP-dependent oxidoreductase domain CH48_692 IPR036812 NADP-dependent oxidoreductase domain superfamily CH48_693 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 CH48_693 IPR016039 Thiolase-like CH48_693 IPR018201 Beta-ketoacyl synthase, active site CH48_693 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CH48_693 IPR014030 Beta-ketoacyl synthase, N-terminal CH48_693 IPR014031 Beta-ketoacyl synthase, C-terminal CH48_693 IPR000794 Beta-ketoacyl synthase CH48_694 IPR001207 Transposase, mutator type CH48_7 IPR012281 Phospholipid biosynthesis protein, PlsX-like CH48_7 IPR003664 Fatty acid synthesis PlsX protein CH48_70 IPR007076 TfoX, N-terminal CH48_70 IPR007077 TfoX, C-terminal CH48_70 IPR026256 Transcriptional regulator, TfoX/Sxy-type CH48_702 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase CH48_702 IPR036412 HAD-like superfamily CH48_702 IPR006543 Histidinol-phosphate phosphatase CH48_702 IPR006549 HAD-superfamily hydrolase,subfamily IIIA CH48_702 IPR023214 HAD superfamily CH48_703 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_703 IPR003593 AAA+ ATPase domain CH48_703 IPR026253 Methionine import ATP-binding protein MetN CH48_703 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria CH48_703 IPR003439 ABC transporter-like CH48_703 IPR017871 ABC transporter, conserved site CH48_703 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal CH48_703 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain CH48_703 IPR018449 NIL domain CH48_704 IPR035906 MetI-like superfamily CH48_704 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CH48_705 IPR004872 Lipoprotein NlpA family CH48_706 IPR030852 Outer membrane lipoprotein RcsF CH48_707 IPR036413 YaeB-like superfamily CH48_707 IPR040372 YaeB-like CH48_707 IPR023368 Uncharacterised protein family UPF0066, conserved site CH48_707 IPR041369 TrmO, C-terminal CH48_707 IPR023370 TrmO-like, N-terminal domain CH48_707 IPR036414 YaeB, N-terminal domain superfamily CH48_708 IPR036621 Anticodon-binding domain superfamily CH48_708 IPR004154 Anticodon-binding CH48_708 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain CH48_708 IPR033730 Prokaryote proline-tRNA ligase core domain CH48_708 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 CH48_708 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type CH48_708 IPR002316 Proline-tRNA ligase, class IIa CH48_708 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily CH48_708 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) CH48_708 IPR006195 Aminoacyl-tRNA synthetase, class II CH48_709 IPR033450 NlpE, C-terminal OB domain CH48_709 IPR007298 Copper resistance lipoprotein NlpE CH48_709 IPR038139 NlpE, C-terminal domain superfamily CH48_71 IPR004596 Cell division suppressor protein, SulA CH48_71 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_710 IPR000352 Peptide chain release factor class I CH48_711 IPR011335 Restriction endonuclease type II-like CH48_711 IPR009822 YaeQ CH48_711 IPR038590 YaeQ superfamily CH48_712 IPR009624 Uncharacterised protein family UPF0253 CH48_713 IPR009778 Modulator of Rho-dependent transcription termination CH48_713 IPR023534 Rof/RNase P-like CH48_713 IPR038626 Rof-like superfamily CH48_714 IPR036909 Cytochrome c-like domain superfamily CH48_714 IPR009056 Cytochrome c-like domain CH48_715 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal CH48_715 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH48_715 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal CH48_715 IPR012094 tRNA(Ile)-lysidine synthase CH48_715 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal CH48_715 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain CH48_716 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CH48_716 IPR037523 Vicinal oxygen chelate (VOC) domain CH48_716 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CH48_716 IPR037478 YwkD-like domain CH48_718 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal CH48_718 IPR029045 ClpP/crotonase-like domain superfamily CH48_718 IPR001095 Acetyl-CoA carboxylase, alpha subunit CH48_719 IPR003141 Polymerase/histidinol phosphatase, N-terminal CH48_719 IPR029460 DNA polymerase, helix-hairpin-helix motif CH48_719 IPR016195 Polymerase/histidinol phosphatase-like CH48_719 IPR004013 PHP domain CH48_719 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CH48_719 IPR004805 DNA polymerase III, alpha subunit CH48_719 IPR040982 DNA polymerase III alpha subunit finger domain CH48_719 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain CH48_719 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain CH48_72 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CH48_72 IPR002368 Outer membrane protein, OmpA CH48_72 IPR006665 OmpA-like domain CH48_72 IPR006690 Outer membrane protein, OmpA-like, conserved site CH48_72 IPR006664 Outer membrane protein, bacterial CH48_72 IPR000498 Outer membrane protein OmpA-like, transmembrane domain CH48_72 IPR036737 OmpA-like domain superfamily CH48_720 IPR012337 Ribonuclease H-like superfamily CH48_720 IPR024567 Ribonuclease HII/HIII domain CH48_720 IPR001352 Ribonuclease HII/HIII CH48_720 IPR022898 Ribonuclease HII CH48_720 IPR036397 Ribonuclease H superfamily CH48_721 IPR003835 Glycosyl transferase, family 19 CH48_722 IPR011004 Trimeric LpxA-like superfamily CH48_722 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase CH48_722 IPR018357 Hexapeptide transferase, conserved site CH48_722 IPR001451 Hexapeptide repeat CH48_722 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal CH48_722 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily CH48_723 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ CH48_723 IPR029069 HotDog domain superfamily CH48_723 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ CH48_724 IPR001451 Hexapeptide repeat CH48_724 IPR018357 Hexapeptide transferase, conserved site CH48_724 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD CH48_724 IPR011004 Trimeric LpxA-like superfamily CH48_724 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region CH48_725 IPR024930 Skp domain superfamily CH48_725 IPR005632 Chaperone protein Skp CH48_726 IPR023707 Outer membrane protein assembly factor BamA CH48_726 IPR000184 Bacterial surface antigen (D15) CH48_726 IPR010827 POTRA domain, BamA/TamA-like CH48_726 IPR034746 POTRA domain CH48_726 IPR039910 Surface antigen D15-like CH48_727 IPR008915 Peptidase M50 CH48_727 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase CH48_727 IPR036034 PDZ superfamily CH48_727 IPR041489 PDZ domain 6 CH48_727 IPR001478 PDZ domain CH48_728 IPR000374 Phosphatidate cytidylyltransferase CH48_729 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site CH48_729 IPR001441 Decaprenyl diphosphate synthase-like CH48_729 IPR036424 Decaprenyl diphosphate synthase-like superfamily CH48_73 IPR038339 MatP, N-terminal domain superfamily CH48_73 IPR013321 Arc-type ribbon-helix-helix CH48_73 IPR035375 MatP, C-terminal ribbon-helix-helix domain CH48_73 IPR009390 Macrodomain Ter protein, MatP CH48_73 IPR035087 MatP, N-terminal CH48_730 IPR036291 NAD(P)-binding domain superfamily CH48_730 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase CH48_730 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal CH48_730 IPR026877 DXP reductoisomerase C-terminal domain CH48_730 IPR036169 DXP reductoisomerase, C-terminal domain superfamily CH48_730 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal CH48_731 IPR036191 RRF superfamily CH48_731 IPR023584 Ribosome recycling factor domain CH48_731 IPR002661 Ribosome recycling factor CH48_732 IPR015963 Uridylate kinase, bacteria CH48_732 IPR036393 Acetylglutamate kinase-like superfamily CH48_732 IPR001048 Aspartate/glutamate/uridylate kinase CH48_732 IPR011817 Uridylate kinase CH48_733 IPR036402 Elongation factor Ts, dimerisation domain superfamily CH48_733 IPR018101 Translation elongation factor Ts, conserved site CH48_733 IPR009060 UBA-like superfamily CH48_733 IPR001816 Translation elongation factor EFTs/EF1B CH48_733 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation CH48_734 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid CH48_734 IPR018130 Ribosomal protein S2, conserved site CH48_734 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily CH48_734 IPR001865 Ribosomal protein S2 CH48_735 IPR036005 Creatinase/aminopeptidase-like CH48_735 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 CH48_735 IPR001714 Peptidase M24, methionine aminopeptidase CH48_735 IPR000994 Peptidase M24 CH48_736 IPR006674 HD domain CH48_736 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase CH48_736 IPR002934 Polymerase, nucleotidyl transferase domain CH48_736 IPR003607 HD/PDEase domain CH48_736 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme CH48_736 IPR002912 ACT domain CH48_737 IPR011004 Trimeric LpxA-like superfamily CH48_737 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily CH48_737 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 CH48_737 IPR018357 Hexapeptide transferase, conserved site CH48_737 IPR001451 Hexapeptide repeat CH48_737 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family CH48_738 IPR020911 Uncharacterised protein family UPF0325 CH48_739 IPR008254 Flavodoxin/nitric oxide synthase CH48_739 IPR029039 Flavoprotein-like superfamily CH48_739 IPR001094 Flavodoxin-like CH48_74 IPR041699 Lon protease, AAA domain CH48_74 IPR008269 Peptidase S16, Lon proteolytic domain CH48_74 IPR027065 Lon protease CH48_74 IPR020568 Ribosomal protein S5 domain 2-type fold CH48_74 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CH48_740 IPR006145 Pseudouridine synthase, RsuA/RluA CH48_740 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site CH48_740 IPR020103 Pseudouridine synthase, catalytic domain superfamily CH48_741 IPR007384 Protein of unknown function UCP006257 CH48_741 IPR023376 YqcC-like domain CH48_741 IPR036814 YqcC-like superfamily CH48_742 IPR009948 Syd CH48_742 IPR038228 Syd superfamily CH48_743 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 CH48_743 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF CH48_743 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal CH48_744 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal CH48_744 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily CH48_744 IPR021826 Domain of unknown function DUF3412 CH48_744 IPR031100 LOG family CH48_745 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal CH48_745 IPR020045 DNA polymerase I-like, H3TH domain CH48_745 IPR036279 5'-3' exonuclease, C-terminal domain superfamily CH48_745 IPR038969 Flap endonuclease CH48_745 IPR029060 PIN-like domain superfamily CH48_745 IPR002421 5'-3' exonuclease, N-terminal CH48_745 IPR008918 Helix-hairpin-helix motif, class 2 CH48_745 IPR022895 Flap endonuclease Xni CH48_748 IPR011224 Ribosomal RNA large subunit methyltransferase M CH48_748 IPR040739 RlmM ferredoxin-like domain CH48_748 IPR002877 Ribosomal RNA methyltransferase FtsJ domain CH48_748 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH48_749 IPR006696 Protein of unknown function DUF423 CH48_75 IPR029069 HotDog domain superfamily CH48_75 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ CH48_75 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA CH48_750 IPR036390 Winged helix DNA-binding domain superfamily CH48_750 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_750 IPR000847 Transcription regulator HTH, LysR CH48_750 IPR005119 LysR, substrate-binding CH48_751 IPR010920 LSM domain superfamily CH48_751 IPR010305 Protein of unknown function DUF903 CH48_752 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA CH48_752 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CH48_752 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CH48_752 IPR015424 Pyridoxal phosphate-dependent transferase CH48_752 IPR000192 Aminotransferase class V domain CH48_752 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CH48_753 IPR003808 Fe-S metabolism associated domain, SufE-like CH48_753 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE CH48_754 IPR000594 THIF-type NAD/FAD binding fold CH48_754 IPR035985 Ubiquitin-activating enzyme CH48_755 IPR036908 RlpA-like domain superfamily CH48_755 IPR005300 Lytic transglycosylase MltA, domain B CH48_755 IPR034654 MltA, 3D domain CH48_755 IPR026044 Membrane-bound lytic murein transglycosylase A CH48_755 IPR010611 3D domain CH48_759 IPR006311 Twin-arginine translocation pathway, signal sequence CH48_759 IPR021731 AMIN domain CH48_759 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain CH48_760 IPR033719 N-acetylglutamate synthase, kinase-like domain CH48_760 IPR000182 GNAT domain CH48_760 IPR016181 Acyl-CoA N-acyltransferase CH48_760 IPR036393 Acetylglutamate kinase-like superfamily CH48_760 IPR010167 Amino-acid N-acetyltransferase CH48_760 IPR001048 Aspartate/glutamate/uridylate kinase CH48_763 IPR027785 UvrD-like helicase C-terminal domain CH48_763 IPR041851 RecBCD enzyme subunit RecD, N-terminal domain CH48_763 IPR003593 AAA+ ATPase domain CH48_763 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_763 IPR006344 RecBCD enzyme subunit RecD CH48_764 IPR014017 UvrD-like DNA helicase, C-terminal CH48_764 IPR014016 UvrD-like helicase, ATP-binding domain CH48_764 IPR011335 Restriction endonuclease type II-like CH48_764 IPR034739 UvrD/AddA helicase, N-terminal CH48_764 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_764 IPR004586 RecBCD enzyme subunit RecB CH48_764 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type CH48_764 IPR011604 Exonuclease, phage-type/RecB, C-terminal CH48_764 IPR000212 DNA helicase, UvrD/REP type CH48_765 IPR032632 Peptidase M16, middle/third domain CH48_765 IPR007863 Peptidase M16, C-terminal CH48_765 IPR001431 Peptidase M16, zinc-binding site CH48_765 IPR011765 Peptidase M16, N-terminal CH48_765 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like CH48_766 IPR013986 DExx box DNA helicase domain superfamily CH48_766 IPR041500 RecC, C-terminal CH48_766 IPR006697 RecBCD enzyme subunit RecC CH48_766 IPR011335 Restriction endonuclease type II-like CH48_766 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_770 IPR020940 Thymidylate synthase, active site CH48_770 IPR000398 Thymidylate synthase CH48_770 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily CH48_770 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain CH48_771 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt CH48_772 IPR008279 PEP-utilising enzyme, mobile domain CH48_772 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CH48_772 IPR040442 Pyruvate kinase-like domain superfamily CH48_772 IPR036618 PtsI, HPr-binding domain superfamily CH48_772 IPR008731 Phosphotransferase system, enzyme I N-terminal CH48_772 IPR006318 Phosphotransferase system, enzyme I-like CH48_772 IPR036637 Phosphohistidine domain superfamily CH48_772 IPR000121 PEP-utilising enzyme, C-terminal CH48_772 IPR023151 PEP-utilising enzyme, conserved site CH48_772 IPR029016 GAF-like domain superfamily CH48_772 IPR003018 GAF domain CH48_772 IPR018274 PEP-utilising enzyme, active site CH48_773 IPR000086 NUDIX hydrolase domain CH48_773 IPR020476 NUDIX hydrolase CH48_773 IPR015797 NUDIX hydrolase-like domain superfamily CH48_773 IPR020084 NUDIX hydrolase, conserved site CH48_773 IPR022927 RNA pyrophosphohydrolase RppH CH48_774 IPR011335 Restriction endonuclease type II-like CH48_774 IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II superfamily CH48_774 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II CH48_774 IPR004230 DNA mismatch repair protein MutH CH48_775 IPR005496 Integral membrane protein TerC CH48_776 IPR020471 Aldo/keto reductase CH48_776 IPR023210 NADP-dependent oxidoreductase domain CH48_776 IPR036812 NADP-dependent oxidoreductase domain superfamily CH48_777 IPR036259 MFS transporter superfamily CH48_777 IPR011701 Major facilitator superfamily CH48_777 IPR023727 Lysophospholipid transporter LplT CH48_778 IPR000873 AMP-dependent synthetase/ligase CH48_778 IPR025110 AMP-binding enzyme, C-terminal domain CH48_778 IPR020845 AMP-binding, conserved site CH48_778 IPR042099 AMP-dependent synthetase-like superfamily CH48_778 IPR023775 Bifunctional protein Aas CH48_778 IPR002123 Phospholipid/glycerol acyltransferase CH48_78 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 CH48_78 IPR000794 Beta-ketoacyl synthase CH48_78 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CH48_78 IPR016039 Thiolase-like CH48_78 IPR018201 Beta-ketoacyl synthase, active site CH48_78 IPR014031 Beta-ketoacyl synthase, C-terminal CH48_78 IPR014030 Beta-ketoacyl synthase, N-terminal CH48_780 IPR009010 Aspartate decarboxylase-like domain superfamily CH48_780 IPR006656 Molybdopterin oxidoreductase CH48_780 IPR006657 Molybdopterin dinucleotide-binding domain CH48_780 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase CH48_780 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site CH48_781 IPR028082 Periplasmic binding protein-like I CH48_781 IPR000843 LacI-type HTH domain CH48_781 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CH48_782 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal CH48_782 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site CH48_782 IPR002986 Diaminopimelate decarboxylase, LysA CH48_782 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal CH48_782 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site CH48_782 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal CH48_782 IPR000183 Ornithine/DAP/Arg decarboxylase CH48_782 IPR029066 PLP-binding barrel CH48_783 IPR011701 Major facilitator superfamily CH48_783 IPR020846 Major facilitator superfamily domain CH48_783 IPR036259 MFS transporter superfamily CH48_784 IPR036390 Winged helix DNA-binding domain superfamily CH48_784 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_784 IPR000847 Transcription regulator HTH, LysR CH48_784 IPR005119 LysR, substrate-binding CH48_784 IPR037414 Transcriptional activator protein LysR, PBP2 domain CH48_785 IPR005119 LysR, substrate-binding CH48_785 IPR036390 Winged helix DNA-binding domain superfamily CH48_785 IPR000847 Transcription regulator HTH, LysR CH48_785 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_787 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CH48_787 IPR003660 HAMP domain CH48_787 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily CH48_787 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CH48_787 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding CH48_787 IPR004090 Chemotaxis methyl-accepting receptor CH48_79 IPR023200 Ribosome modulation factor domain superfamily CH48_79 IPR007040 Ribosome modulation factor CH48_792 IPR010627 Peptidase A24A, N-terminal CH48_792 IPR000045 Prepilin type IV endopeptidase, peptidase domain CH48_792 IPR014032 Peptidase A24A, prepilin type IV, bacterial CH48_8 IPR002677 Ribosomal protein L32p CH48_8 IPR011332 Zinc-binding ribosomal protein CH48_80 IPR005586 ABC-type transport auxiliary lipoprotein component CH48_800 IPR013545 Type II secretion system protein G CH48_800 IPR012902 Prokaryotic N-terminal methylation site CH48_800 IPR010054 General secretion pathway protein G CH48_800 IPR000983 Bacterial general secretion pathway protein G-type pilin CH48_801 IPR001992 Type II secretion system conserved site CH48_801 IPR042094 Type II secretion system F domain superfamily CH48_801 IPR018076 Type II secretion system F domain CH48_801 IPR011850 General secretion pathway protein F CH48_801 IPR003004 GspF/PilC family CH48_803 IPR005644 NolW-like CH48_803 IPR038591 NolW-like superfamily CH48_803 IPR004846 Type II/III secretion system CH48_803 IPR013356 Type II secretion system GspD CH48_803 IPR004845 Type II secretion system GspD, conserved site CH48_803 IPR001775 GspD/PilQ family CH48_806 IPR036874 Carbonic anhydrase superfamily CH48_806 IPR001765 Carbonic anhydrase CH48_806 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site CH48_807 IPR036390 Winged helix DNA-binding domain superfamily CH48_807 IPR002577 Helix-turn-helix, HxlR type CH48_807 IPR011991 ArsR-like helix-turn-helix domain CH48_807 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_808 IPR002347 Short-chain dehydrogenase/reductase SDR CH48_808 IPR036291 NAD(P)-binding domain superfamily CH48_809 IPR022835 Chaperone modulatory protein CbpM CH48_81 IPR003399 Mce/MlaD CH48_810 IPR008971 HSP40/DnaJ peptide-binding CH48_810 IPR001623 DnaJ domain CH48_810 IPR023859 DNA-binding protein, curved-DNA CH48_810 IPR036869 Chaperone J-domain superfamily CH48_810 IPR018253 DnaJ domain, conserved site CH48_810 IPR002939 Chaperone DnaJ, C-terminal CH48_812 IPR000014 PAS domain CH48_812 IPR029787 Nucleotide cyclase CH48_812 IPR035965 PAS domain superfamily CH48_812 IPR000160 GGDEF domain CH48_812 IPR000700 PAS-associated, C-terminal CH48_812 IPR013656 PAS fold-4 CH48_813 IPR032710 NTF2-like domain superfamily CH48_813 IPR037401 SnoaL-like domain CH48_816 IPR001207 Transposase, mutator type CH48_817 IPR001387 Cro/C1-type helix-turn-helix domain CH48_817 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CH48_817 IPR022452 Antitoxin MqsA CH48_817 IPR032758 Antitoxin MqsA/HigA-2 CH48_817 IPR022453 Zinc finger, MqsA-type CH48_818 IPR031451 mRNA interferase toxin MqsR CH48_818 IPR038493 Toxin MqsR superfamily CH48_82 IPR007498 Intermembrane transport protein PqiA-like CH48_82 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type CH48_821 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CH48_821 IPR001387 Cro/C1-type helix-turn-helix domain CH48_824 IPR009057 Homeobox-like domain superfamily CH48_824 IPR006118 Recombinase, conserved site CH48_824 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily CH48_824 IPR006120 Resolvase, HTH domain CH48_824 IPR006119 Resolvase, N-terminal catalytic domain CH48_827 IPR017894 HTH domain, IS21 transposase-type CH48_827 IPR001584 Integrase, catalytic core CH48_829 IPR001270 ClpA/B family CH48_829 IPR002611 IstB-like ATP-binding protein CH48_829 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CH48_829 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_829 IPR003593 AAA+ ATPase domain CH48_83 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily CH48_83 IPR003593 AAA+ ATPase domain CH48_83 IPR032524 ABC transporter Uup, C-terminal CH48_83 IPR003439 ABC transporter-like CH48_83 IPR032781 ABC-transporter extension domain CH48_83 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_83 IPR017871 ABC transporter, conserved site CH48_831 IPR002313 Lysine-tRNA ligase, class II CH48_831 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CH48_831 IPR012340 Nucleic acid-binding, OB-fold CH48_831 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal CH48_831 IPR006195 Aminoacyl-tRNA synthetase, class II CH48_831 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) CH48_831 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II CH48_832 IPR005139 Peptide chain release factor CH48_832 IPR004374 Peptide chain release factor 2 CH48_832 IPR000352 Peptide chain release factor class I CH48_833 IPR004610 Bacterial RecJ exonuclease CH48_833 IPR041122 RecJ, OB domain CH48_833 IPR001667 DDH domain CH48_833 IPR038763 DHH phosphoesterase superfamily CH48_833 IPR003156 DHHA1 domain CH48_834 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily CH48_834 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal CH48_834 IPR013766 Thioredoxin domain CH48_834 IPR033954 Disulphide bond isomerase, DsbC/G CH48_834 IPR017937 Thioredoxin, conserved site CH48_834 IPR036249 Thioredoxin-like superfamily CH48_834 IPR012336 Thioredoxin-like fold CH48_835 IPR010998 Integrase/recombinase, N-terminal CH48_835 IPR023009 Tyrosine recombinase XerC/XerD CH48_835 IPR011932 Tyrosine recombinase XerD CH48_835 IPR004107 Integrase, SAM-like, N-terminal CH48_835 IPR011010 DNA breaking-rejoining enzyme, catalytic core CH48_835 IPR013762 Integrase-like, catalytic domain superfamily CH48_835 IPR002104 Integrase, catalytic domain CH48_836 IPR001226 Flavodoxin, conserved site CH48_836 IPR008254 Flavodoxin/nitric oxide synthase CH48_836 IPR010086 Flavodoxin, long chain CH48_836 IPR029039 Flavoprotein-like superfamily CH48_837 IPR010364 Uncharacterised protein family, inner membrane CreD CH48_838 IPR003594 Histidine kinase/HSP90-like ATPase CH48_838 IPR003660 HAMP domain CH48_838 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CH48_838 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH48_838 IPR005467 Histidine kinase domain CH48_838 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CH48_838 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CH48_838 IPR029151 Periplasmic sensor-like domain superfamily CH48_839 IPR039420 Transcriptional regulatory protein WalR-like CH48_839 IPR001789 Signal transduction response regulator, receiver domain CH48_839 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_839 IPR011006 CheY-like superfamily CH48_839 IPR001867 OmpR/PhoB-type DNA-binding domain CH48_839 IPR016032 Signal transduction response regulator, C-terminal effector CH48_84 IPR004114 THUMP domain CH48_84 IPR019614 S-adenosylmethionine-dependent methyltransferase CH48_84 IPR000241 Putative RNA methylase domain CH48_84 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH48_84 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CH48_84 IPR017244 Ribosomal RNA large subunit methyltransferase K/L CH48_840 IPR009883 Inner membrane protein YgfX CH48_841 IPR036714 Flavinator of succinate dehydrogenase superfamily CH48_841 IPR005631 Flavinator of succinate dehydrogenase CH48_842 IPR017703 YgfZ/GcvT conserved site CH48_842 IPR006222 Aminomethyltransferase, folate-binding domain CH48_842 IPR023758 tRNA-modifying protein YgfZ CH48_842 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal CH48_844 IPR005744 Hly-III CH48_844 IPR004254 AdipoR/Haemolysin-III-related CH48_846 IPR036291 NAD(P)-binding domain superfamily CH48_846 IPR002347 Short-chain dehydrogenase/reductase SDR CH48_846 IPR020904 Short-chain dehydrogenase/reductase, conserved site CH48_849 IPR003437 Glycine dehydrogenase (decarboxylating) CH48_849 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CH48_849 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CH48_849 IPR015424 Pyridoxal phosphate-dependent transferase CH48_849 IPR020581 Glycine cleavage system P protein CH48_85 IPR005303 MOSC, N-terminal beta barrel CH48_85 IPR036010 2Fe-2S ferredoxin-like superfamily CH48_85 IPR011037 Pyruvate kinase-like, insert domain superfamily CH48_85 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CH48_85 IPR005302 Molybdenum cofactor sulfurase, C-terminal CH48_85 IPR012675 Beta-grasp domain superfamily CH48_85 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CH48_850 IPR011053 Single hybrid motif CH48_850 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CH48_850 IPR017453 Glycine cleavage system H-protein, subgroup CH48_850 IPR000089 Biotin/lipoyl attachment CH48_850 IPR002930 Glycine cleavage system H-protein CH48_850 IPR033753 Glycine cleavage system H-protein/Simiate CH48_851 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 CH48_851 IPR022903 Glycine cleavage system T protein, bacteria CH48_851 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal CH48_851 IPR028896 Aminomethyltransferase-like CH48_851 IPR006222 Aminomethyltransferase, folate-binding domain CH48_851 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain CH48_851 IPR006223 Glycine cleavage system T protein CH48_852 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 CH48_852 IPR036188 FAD/NAD(P)-binding domain superfamily CH48_852 IPR002938 FAD-binding domain CH48_852 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site CH48_853 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 CH48_853 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site CH48_853 IPR036188 FAD/NAD(P)-binding domain superfamily CH48_853 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase CH48_853 IPR002938 FAD-binding domain CH48_854 IPR007865 Aminopeptidase P, N-terminal CH48_854 IPR001714 Peptidase M24, methionine aminopeptidase CH48_854 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CH48_854 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site CH48_854 IPR036005 Creatinase/aminopeptidase-like CH48_854 IPR000994 Peptidase M24 CH48_855 IPR011978 Uncharacterised protein family UPF0149 CH48_855 IPR036255 YgfB-like superfamily CH48_856 IPR036192 Cell division protein ZapA-like superfamily CH48_856 IPR007838 Cell division protein ZapA-like CH48_856 IPR023771 Cell division protein ZapA, eubacteria CH48_857 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily CH48_857 IPR002698 5-formyltetrahydrofolate cyclo-ligase CH48_857 IPR037171 NagB/RpiA transferase-like CH48_858 IPR020811 Enolase, N-terminal CH48_858 IPR020810 Enolase, C-terminal TIM barrel domain CH48_858 IPR000941 Enolase CH48_858 IPR020809 Enolase, conserved site CH48_858 IPR029017 Enolase-like, N-terminal CH48_858 IPR036849 Enolase-like, C-terminal domain superfamily CH48_859 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_859 IPR033828 CTP synthase GATase domain CH48_859 IPR029062 Class I glutamine amidotransferase-like CH48_859 IPR017456 CTP synthase, N-terminal CH48_859 IPR017926 Glutamine amidotransferase CH48_859 IPR004468 CTP synthase CH48_86 IPR009809 Cell division protein ZapC CH48_861 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core CH48_861 IPR011551 NTP pyrophosphohydrolase MazG CH48_862 IPR002912 ACT domain CH48_862 IPR004811 RelA/SpoT family CH48_862 IPR007685 RelA/SpoT CH48_862 IPR004095 TGS CH48_862 IPR012676 TGS-like CH48_862 IPR033655 RelA, TGS domain CH48_862 IPR012675 Beta-grasp domain superfamily CH48_862 IPR003607 HD/PDEase domain CH48_863 IPR002792 TRAM domain CH48_863 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD CH48_863 IPR030390 RNA methyltransferase TrmA, active site CH48_863 IPR030391 RNA methyltransferase TrmA, conserved site CH48_863 IPR012340 Nucleic acid-binding, OB-fold CH48_863 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH48_863 IPR010280 (Uracil-5)-methyltransferase family CH48_864 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH48_864 IPR001789 Signal transduction response regulator, receiver domain CH48_864 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CH48_864 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CH48_864 IPR036641 HPT domain superfamily CH48_864 IPR019247 Histidine kinase BarA, N-terminal CH48_864 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CH48_864 IPR011006 CheY-like superfamily CH48_864 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CH48_864 IPR003594 Histidine kinase/HSP90-like ATPase CH48_864 IPR005467 Histidine kinase domain CH48_864 IPR003660 HAMP domain CH48_865 IPR001478 PDZ domain CH48_865 IPR036034 PDZ superfamily CH48_865 IPR011782 Peptidase S1C, Do CH48_865 IPR009003 Peptidase S1, PA clan CH48_865 IPR001940 Peptidase S1C CH48_866 IPR006261 dNTP triphosphohydrolase CH48_866 IPR026875 Phosphohydrolase-associated domain CH48_866 IPR006674 HD domain CH48_866 IPR003607 HD/PDEase domain CH48_866 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain superfamily CH48_866 IPR020779 dNTP triphosphohydrolase, type 1 CH48_867 IPR010049 MTA/SAH nucleosidase CH48_867 IPR000845 Nucleoside phosphorylase domain CH48_867 IPR035994 Nucleoside phosphorylase superfamily CH48_868 IPR002491 ABC transporter periplasmic binding domain CH48_868 IPR023544 ABC transporter, vitamin B12-binding protein CH48_869 IPR005115 Uncharacterised domain UPF0126 CH48_87 IPR001295 Dihydroorotate dehydrogenase, conserved site CH48_87 IPR005719 Dihydroorotate dehydrogenase, class 2 CH48_87 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 CH48_87 IPR013785 Aldolase-type TIM barrel CH48_87 IPR005720 Dihydroorotate dehydrogenase domain CH48_870 IPR017870 FeS cluster insertion, C-terminal, conserved site CH48_870 IPR035903 HesB-like domain superfamily CH48_870 IPR000361 FeS cluster biogenesis CH48_870 IPR023063 FeS cluster insertion protein ErpA CH48_870 IPR016092 FeS cluster insertion protein CH48_871 IPR014743 Chloride channel, core CH48_871 IPR001807 Chloride channel, voltage gated CH48_871 IPR023861 Chloride channel, ClcA CH48_872 IPR005814 Aminotransferase class-III CH48_872 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase CH48_872 IPR015424 Pyridoxal phosphate-dependent transferase CH48_872 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CH48_872 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CH48_873 IPR004737 Nitrate transporter CH48_873 IPR036259 MFS transporter superfamily CH48_873 IPR011701 Major facilitator superfamily CH48_874 IPR000522 ABC transporter, permease protein, BtuC-like CH48_874 IPR037294 ABC transporter, BtuC-like CH48_876 IPR002491 ABC transporter periplasmic binding domain CH48_877 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_877 IPR017871 ABC transporter, conserved site CH48_877 IPR003439 ABC transporter-like CH48_877 IPR003593 AAA+ ATPase domain CH48_878 IPR036950 Penicillin binding protein transglycosylase domain CH48_878 IPR001460 Penicillin-binding protein, transpeptidase CH48_878 IPR001264 Glycosyl transferase, family 51 CH48_878 IPR023346 Lysozyme-like domain superfamily CH48_878 IPR011813 Penicillin-binding protein 1B CH48_878 IPR028166 Bifunctional transglycosylase second domain CH48_878 IPR012338 Beta-lactamase/transpeptidase-like CH48_878 IPR032730 Transglycosylase PBP1b, N-terminal transmembrane domain CH48_879 IPR001650 Helicase, C-terminal CH48_879 IPR014001 Helicase superfamily 1/2, ATP-binding domain CH48_879 IPR011545 DEAD/DEAH box helicase domain CH48_879 IPR007502 Helicase-associated domain CH48_879 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal CH48_879 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_879 IPR010225 ATP-dependent helicase HrpB CH48_88 IPR014782 Peptidase M1, membrane alanine aminopeptidase CH48_88 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold CH48_88 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily CH48_88 IPR027268 Peptidase M4/M1, CTD superfamily CH48_88 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase CH48_88 IPR042097 Aminopeptidase N-like , N-terminal CH48_88 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily CH48_88 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal CH48_88 IPR012779 Peptidase M1, alanyl aminopeptidase CH48_880 IPR014051 Phosphoesterase, HXTX CH48_880 IPR004175 RNA 2',3'-cyclic phosphodiesterase CH48_880 IPR009097 Cyclic phosphodiesterase CH48_881 IPR040452 Sugar fermentation stimulation protein, C-terminal CH48_881 IPR005224 Sugar fermentation stimulation protein CH48_881 IPR041465 SfsA, N-terminal OB domain CH48_882 IPR000962 Zinc finger, DksA/TraR C4-type CH48_882 IPR012784 RNA polymerase-binding transcription factor DksA CH48_882 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria CH48_882 IPR020458 Zinc finger, DksA/TraR C4-type conserved site CH48_882 IPR037187 DksA, N-terminal domain superfamily CH48_883 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain CH48_883 IPR022380 Glutamyl-Q tRNA(Asp) synthetase CH48_883 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH48_883 IPR000924 Glutamyl/glutaminyl-tRNA synthetase CH48_884 IPR010206 Poly(A) polymerase I CH48_884 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain CH48_884 IPR002646 Poly A polymerase, head domain CH48_884 IPR025866 Polymerase A arginine-rich C-terminal domain CH48_885 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK CH48_885 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily CH48_886 IPR003700 Ketopantoate hydroxymethyltransferase CH48_886 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CH48_886 IPR040442 Pyruvate kinase-like domain superfamily CH48_887 IPR003721 Pantoate-beta-alanine ligase CH48_887 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain CH48_887 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH48_888 IPR009010 Aspartate decarboxylase-like domain superfamily CH48_888 IPR003190 Aspartate decarboxylase CH48_889 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CH48_889 IPR002509 NodB homology domain CH48_89 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase CH48_89 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain CH48_89 IPR006406 Nicotinate phosphoribosyltransferase CH48_89 IPR007229 Nicotinate phosphoribosyltransferase family CH48_89 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal CH48_890 IPR000412 ABC-2 transporter CH48_890 IPR013525 ABC-2 type transporter CH48_891 IPR003593 AAA+ ATPase domain CH48_891 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_891 IPR017871 ABC transporter, conserved site CH48_891 IPR003439 ABC transporter-like CH48_893 IPR001765 Carbonic anhydrase CH48_893 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site CH48_893 IPR036874 Carbonic anhydrase superfamily CH48_894 IPR005904 Hypoxanthine phosphoribosyl transferase CH48_894 IPR000836 Phosphoribosyltransferase domain CH48_894 IPR029057 Phosphoribosyltransferase-like CH48_895 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CH48_895 IPR001117 Multicopper oxidase, type 1 CH48_895 IPR002355 Multicopper oxidase, copper-binding site CH48_895 IPR006311 Twin-arginine translocation pathway, signal sequence CH48_895 IPR011706 Multicopper oxidase, type 2 CH48_895 IPR011707 Multicopper oxidase, type 3 CH48_895 IPR008972 Cupredoxin CH48_896 IPR038432 PulS/OutS-like superfamily CH48_896 IPR019114 Chaperone lipoprotein, PulS/OutS-like CH48_897 IPR030373 Polyamine biosynthesis domain, conserved site CH48_897 IPR035246 Spermidine synthase, tetramerisation domain CH48_897 IPR001045 Spermidine/spermine synthases CH48_897 IPR030374 Polyamine biosynthesis domain CH48_897 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH48_897 IPR037163 Spermidine synthase, tetramerisation domain superfamily CH48_898 IPR009165 S-adenosylmethionine decarboxylase, bacterial CH48_898 IPR016067 S-adenosylmethionine decarboxylase, core CH48_898 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic CH48_899 IPR041256 CDI immunity protein CH48_9 IPR003772 Large ribosomal RNA subunit accumulation protein YceD CH48_9 IPR039255 Large ribosomal RNA subunit accumulation protein YceD, bacteria CH48_90 IPR004522 Asparagine-tRNA ligase CH48_90 IPR006195 Aminoacyl-tRNA synthetase, class II CH48_90 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) CH48_90 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CH48_90 IPR012340 Nucleic acid-binding, OB-fold CH48_90 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb CH48_900 IPR000620 EamA domain CH48_901 IPR008249 Uncharacterised protein family UPF0231 CH48_902 IPR015932 Aconitase, domain 2 CH48_902 IPR018136 Aconitase family, 4Fe-4S cluster binding site CH48_902 IPR036008 Aconitase, iron-sulfur domain CH48_902 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 CH48_902 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain CH48_902 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CH48_902 IPR015929 Aconitase B, swivel CH48_902 IPR004406 Aconitase B CH48_902 IPR015933 Aconitase B, HEAT-like domain CH48_902 IPR036288 Aconitase B, HEAT-like domain superfamily CH48_903 IPR010105 TonB-dependent siderophore receptor CH48_903 IPR000531 TonB-dependent receptor-like, beta-barrel CH48_903 IPR012910 TonB-dependent receptor, plug domain CH48_903 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CH48_903 IPR010917 TonB-dependent receptor, conserved site CH48_903 IPR039426 Vitamin B12 transporter BtuB-like CH48_903 IPR037066 TonB-dependent receptor, plug domain superfamily CH48_904 IPR009057 Homeobox-like domain superfamily CH48_904 IPR029062 Class I glutamine amidotransferase-like CH48_904 IPR002818 DJ-1/PfpI CH48_904 IPR018062 HTH domain AraC-type, conserved site CH48_904 IPR018060 DNA binding HTH domain, AraC-type CH48_904 IPR020449 Transcription regulator HTH, AraC- type CH48_906 IPR006258 Dihydrolipoamide dehydrogenase CH48_906 IPR023753 FAD/NAD(P)-binding domain CH48_906 IPR036188 FAD/NAD(P)-binding domain superfamily CH48_906 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I CH48_906 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CH48_906 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site CH48_906 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily CH48_907 IPR004167 Peripheral subunit-binding domain CH48_907 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CH48_907 IPR036625 E3-binding domain superfamily CH48_907 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily CH48_907 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain CH48_907 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex CH48_907 IPR000089 Biotin/lipoyl attachment CH48_907 IPR011053 Single hybrid motif CH48_908 IPR005474 Transketolase, N-terminal CH48_908 IPR029061 Thiamin diphosphate-binding fold CH48_908 IPR041621 Pyruvate dehydrogenase E1 component, middle domain CH48_908 IPR004660 Pyruvate dehydrogenase E1 component CH48_908 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal CH48_908 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II CH48_909 IPR011711 GntR, C-terminal CH48_909 IPR008920 Transcription regulator FadR/GntR, C-terminal CH48_909 IPR000524 Transcription regulator HTH, GntR CH48_909 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_909 IPR036390 Winged helix DNA-binding domain superfamily CH48_91 IPR001702 Porin, Gram-negative type CH48_91 IPR001897 Porin, gammaproteobacterial CH48_91 IPR023614 Porin domain superfamily CH48_91 IPR033900 Porin domain, Gram-negative type CH48_91 IPR013793 Porin, Gram-negative type, conserved site CH48_910 IPR004841 Amino acid permease/ SLC12A domain CH48_910 IPR004840 Amino acid permease, conserved site CH48_911 IPR031347 Protein AmpE CH48_912 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily CH48_912 IPR002502 N-acetylmuramoyl-L-alanine amidase domain CH48_913 IPR004393 Nicotinate-nucleotide pyrophosphorylase CH48_913 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD CH48_913 IPR013785 Aldolase-type TIM barrel CH48_913 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal CH48_913 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily CH48_913 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal CH48_913 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal CH48_914 IPR012902 Prokaryotic N-terminal methylation site CH48_915 IPR007831 General secretory system II, protein E, N-terminal CH48_915 IPR001482 Type II/IV secretion system protein CH48_915 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_916 IPR042094 Type II secretion system F domain superfamily CH48_916 IPR018076 Type II secretion system F domain CH48_916 IPR003004 GspF/PilC family CH48_916 IPR001992 Type II secretion system conserved site CH48_917 IPR005993 GMP reductase CH48_917 IPR015875 IMP dehydrogenase / GMP reductase, conserved site CH48_917 IPR001093 IMP dehydrogenase/GMP reductase CH48_917 IPR013785 Aldolase-type TIM barrel CH48_918 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_918 IPR001977 Dephospho-CoA kinase CH48_919 IPR036268 ZapD domain superfamily CH48_919 IPR027462 Z ring-associated protein D, C-terminal CH48_919 IPR009777 Cell division protein ZapD CH48_92 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CH48_92 IPR004839 Aminotransferase, class I/classII CH48_92 IPR000796 Aspartate/other aminotransferase CH48_92 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site CH48_92 IPR015424 Pyridoxal phosphate-dependent transferase CH48_92 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CH48_920 IPR013088 Zinc finger, NHR/GATA-type CH48_920 IPR005584 DNA gyrase inhibitor YacG CH48_921 IPR020084 NUDIX hydrolase, conserved site CH48_921 IPR000086 NUDIX hydrolase domain CH48_921 IPR020476 NUDIX hydrolase CH48_921 IPR003561 Mutator MutT CH48_921 IPR015797 NUDIX hydrolase-like domain superfamily CH48_922 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_922 IPR011116 SecA Wing/Scaffold CH48_922 IPR011130 SecA, preprotein cross-linking domain CH48_922 IPR000185 Protein translocase subunit SecA CH48_922 IPR020937 SecA conserved site CH48_922 IPR011115 SecA DEAD-like, N-terminal CH48_922 IPR014018 SecA motor DEAD CH48_922 IPR036670 SecA, preprotein cross-linking domain superfamily CH48_922 IPR036266 SecA, Wing/Scaffold superfamily CH48_922 IPR004027 SEC-C motif CH48_923 IPR009502 Secretion monitor CH48_925 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal CH48_925 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal CH48_925 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase CH48_925 IPR020568 Ribosomal protein S5 domain 2-type fold CH48_926 IPR003008 Tubulin/FtsZ, GTPase domain CH48_926 IPR036525 Tubulin/FtsZ, GTPase domain superfamily CH48_926 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain CH48_926 IPR024757 Cell division protein FtsZ, C-terminal CH48_926 IPR020805 Cell division protein FtsZ, conserved site CH48_926 IPR000158 Cell division protein FtsZ CH48_926 IPR008280 Tubulin/FtsZ, C-terminal CH48_927 IPR020823 Cell division protein FtsA CH48_927 IPR003494 SHS2 domain inserted in FtsA CH48_928 IPR013685 POTRA domain, FtsQ-type CH48_928 IPR034746 POTRA domain CH48_928 IPR026579 Cell division protein FtsQ CH48_928 IPR005548 Cell division protein FtsQ/DivIB CH48_929 IPR011095 D-alanine--D-alanine ligase, C-terminal CH48_929 IPR011127 D-alanine--D-alanine ligase, N-terminal domain CH48_929 IPR005905 D-alanine--D-alanine ligase CH48_929 IPR016185 Pre-ATP-grasp domain superfamily CH48_929 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site CH48_929 IPR011761 ATP-grasp fold CH48_929 IPR013815 ATP-grasp fold, subdomain 1 CH48_93 IPR001633 EAL domain CH48_93 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain CH48_93 IPR035919 EAL domain superfamily CH48_930 IPR036565 Mur-like, catalytic domain superfamily CH48_930 IPR004101 Mur ligase, C-terminal CH48_930 IPR036615 Mur ligase, C-terminal domain superfamily CH48_930 IPR005758 UDP-N-acetylmuramate--L-alanine ligase CH48_930 IPR013221 Mur ligase, central CH48_930 IPR000713 Mur ligase, N-terminal catalytic domain CH48_931 IPR006009 N-acetylglucosaminyltransferase, MurG CH48_931 IPR007235 Glycosyl transferase, family 28, C-terminal CH48_931 IPR004276 Glycosyltransferase family 28, N-terminal domain CH48_932 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA CH48_932 IPR013437 Probable peptidoglycan glycosyltransferase FtsW CH48_932 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site CH48_933 IPR036565 Mur-like, catalytic domain superfamily CH48_933 IPR013221 Mur ligase, central CH48_933 IPR036615 Mur ligase, C-terminal domain superfamily CH48_933 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase CH48_933 IPR004101 Mur ligase, C-terminal CH48_934 IPR000715 Glycosyl transferase, family 4 CH48_934 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase CH48_934 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site CH48_935 IPR000713 Mur ligase, N-terminal catalytic domain CH48_935 IPR036565 Mur-like, catalytic domain superfamily CH48_935 IPR035911 MurE/MurF, N-terminal CH48_935 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase CH48_935 IPR013221 Mur ligase, central CH48_935 IPR036615 Mur ligase, C-terminal domain superfamily CH48_935 IPR004101 Mur ligase, C-terminal CH48_936 IPR036565 Mur-like, catalytic domain superfamily CH48_936 IPR000713 Mur ligase, N-terminal catalytic domain CH48_936 IPR035911 MurE/MurF, N-terminal CH48_936 IPR036615 Mur ligase, C-terminal domain superfamily CH48_936 IPR004101 Mur ligase, C-terminal CH48_936 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase CH48_936 IPR013221 Mur ligase, central CH48_937 IPR037532 Peptidoglycan D,D-transpeptidase FtsI CH48_937 IPR001460 Penicillin-binding protein, transpeptidase CH48_937 IPR005311 Penicillin-binding protein, dimerisation domain CH48_937 IPR036138 Penicillin-binding protein, dimerisation domain superfamily CH48_937 IPR012338 Beta-lactamase/transpeptidase-like CH48_938 IPR011922 Cell division protein FtsL CH48_939 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH48_939 IPR002903 Ribosomal RNA small subunit methyltransferase H CH48_939 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily CH48_94 IPR001279 Metallo-beta-lactamase CH48_94 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CH48_940 IPR003444 Transcriptional regulator MraZ CH48_940 IPR035644 MraZ, C-terminal CH48_940 IPR037914 SpoVT-AbrB domain superfamily CH48_940 IPR007159 SpoVT-AbrB domain CH48_940 IPR038619 MraZ superfamily CH48_940 IPR020603 MraZ domain CH48_940 IPR035642 MraZ, N-terminal CH48_941 IPR010574 L-alanine exporter AlaE CH48_942 IPR028082 Periplasmic binding protein-like I CH48_942 IPR012781 D-fructose-responsive transcription factor CH48_942 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CH48_942 IPR000843 LacI-type HTH domain CH48_942 IPR001761 Periplasmic binding protein/LacI sugar binding domain CH48_943 IPR019455 Acetolactate synthase, small subunit, C-terminal CH48_943 IPR002912 ACT domain CH48_943 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal CH48_943 IPR004789 Acetolactate synthase, small subunit CH48_943 IPR039557 AHAS, ACT domain CH48_944 IPR029035 DHS-like NAD/FAD-binding domain superfamily CH48_944 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CH48_944 IPR000399 TPP-binding enzyme, conserved site CH48_944 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CH48_944 IPR039368 Acetolactate synthase large subunit, TPP binding domain CH48_944 IPR012000 Thiamine pyrophosphate enzyme, central domain CH48_944 IPR012846 Acetolactate synthase, large subunit, biosynthetic CH48_944 IPR029061 Thiamin diphosphate-binding fold CH48_945 IPR020845 AMP-binding, conserved site CH48_945 IPR042099 AMP-dependent synthetase-like superfamily CH48_945 IPR000873 AMP-dependent synthetase/ligase CH48_946 IPR000847 Transcription regulator HTH, LysR CH48_946 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_946 IPR036390 Winged helix DNA-binding domain superfamily CH48_946 IPR005119 LysR, substrate-binding CH48_948 IPR000891 Pyruvate carboxyltransferase CH48_948 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain CH48_948 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site CH48_948 IPR013785 Aldolase-type TIM barrel CH48_948 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily CH48_948 IPR005671 2-isopropylmalate synthase, bacterial-type CH48_949 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site CH48_949 IPR024084 Isopropylmalate dehydrogenase-like domain CH48_949 IPR004429 Isopropylmalate dehydrogenase CH48_95 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily CH48_95 IPR010275 Protein of unknown function DUF882 CH48_95 IPR006311 Twin-arginine translocation pathway, signal sequence CH48_950 IPR036008 Aconitase, iron-sulfur domain CH48_950 IPR018136 Aconitase family, 4Fe-4S cluster binding site CH48_950 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 CH48_950 IPR004430 3-isopropylmalate dehydratase, large subunit CH48_950 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain CH48_950 IPR033941 3-Isopropylmalate dehydratase, catalytic domain CH48_951 IPR004431 3-isopropylmalate dehydratase, small subunit CH48_951 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CH48_951 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain CH48_951 IPR033940 3-isopropylmalate dehydratase, swivel domain CH48_953 IPR011166 Beta-eliminating lyase family CH48_953 IPR018176 Tryptophanase, conserved site CH48_953 IPR013440 Tryptophanase CH48_953 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CH48_953 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CH48_953 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase CH48_953 IPR015424 Pyridoxal phosphate-dependent transferase CH48_954 IPR013059 Tryptophan/tyrosine transporter CH48_954 IPR013061 Tryptophan/tryrosine permease, conserved site CH48_954 IPR018227 Amino acid/polyamine transporter 2 CH48_956 IPR004750 Sugar efflux CH48_956 IPR011701 Major facilitator superfamily CH48_956 IPR020846 Major facilitator superfamily domain CH48_956 IPR036259 MFS transporter superfamily CH48_958 IPR013785 Aldolase-type TIM barrel CH48_958 IPR034457 Organic radical-activating enzymes CH48_958 IPR034465 Pyruvate formate-lyase activase CH48_958 IPR001989 Radical-activating enzyme, conserved site CH48_958 IPR007197 Radical SAM CH48_958 IPR012839 Organic radical enzyme activase CH48_959 IPR039424 Solute-binding protein family 5 CH48_959 IPR000914 Solute-binding protein family 5 domain CH48_959 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain CH48_959 IPR036390 Winged helix DNA-binding domain superfamily CH48_959 IPR023767 Transcriptional regulator SgrR CH48_96 IPR005490 L,D-transpeptidase catalytic domain CH48_96 IPR002477 Peptidoglycan binding-like CH48_96 IPR036365 PGBD-like superfamily CH48_96 IPR038063 L,D-transpeptidase catalytic domain-like CH48_962 IPR006061 Solute-binding family 1, conserved site CH48_962 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria CH48_962 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter CH48_963 IPR005947 Thiamine ABC transporter, permease protein CH48_963 IPR035906 MetI-like superfamily CH48_963 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CH48_964 IPR032816 SNARE associated Golgi protein CH48_964 IPR032818 DedA family CH48_965 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_965 IPR017871 ABC transporter, conserved site CH48_965 IPR003439 ABC transporter-like CH48_965 IPR003593 AAA+ ATPase domain CH48_965 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ CH48_966 IPR012337 Ribonuclease H-like superfamily CH48_966 IPR023211 DNA polymerase, palm domain superfamily CH48_966 IPR042087 DNA polymerase family B, C-terminal domain CH48_966 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain CH48_966 IPR036397 Ribonuclease H superfamily CH48_966 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain CH48_966 IPR017964 DNA-directed DNA polymerase, family B, conserved site CH48_966 IPR006172 DNA-directed DNA polymerase, family B CH48_967 IPR040766 RapA, N-terminal Tudor-like domain 2 CH48_967 IPR022737 RNA polymerase recycling, bacterial, C-terminal CH48_967 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_967 IPR014001 Helicase superfamily 1/2, ATP-binding domain CH48_967 IPR001650 Helicase, C-terminal CH48_967 IPR038718 SNF2-like, N-terminal domain superfamily CH48_967 IPR023949 RNA polymerase-associated protein RapA CH48_967 IPR000330 SNF2-related, N-terminal domain CH48_967 IPR040765 RapA, N-terminal Tudor like domain 1 CH48_968 IPR008964 Invasin/intimin cell-adhesion fragments CH48_968 IPR015217 Invasin, domain 3 CH48_968 IPR013783 Immunoglobulin-like fold CH48_968 IPR003535 Intimin/invasin bacterial adhesion mediator protein CH48_968 IPR038177 Inverse autotransporter, beta-domain superfamily CH48_968 IPR022409 PKD/Chitinase domain CH48_968 IPR024519 Inverse autotransporter, beta-domain CH48_968 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CH48_968 IPR018392 LysM domain CH48_969 IPR006145 Pseudouridine synthase, RsuA/RluA CH48_969 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site CH48_969 IPR020103 Pseudouridine synthase, catalytic domain superfamily CH48_97 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH48_97 IPR012090 Chromosome partition protein MukB CH48_97 IPR032520 MukB, hinge domain CH48_97 IPR007406 MukB, N-terminal domain CH48_970 IPR036869 Chaperone J-domain superfamily CH48_970 IPR029024 TerB-like CH48_970 IPR023749 Co-chaperone DjlA CH48_970 IPR001623 DnaJ domain CH48_970 IPR007791 Co-chaperone DjlA, N-terminal CH48_971 IPR005653 Organic solvent tolerance-like, N-terminal CH48_971 IPR007543 LptD, C-terminal CH48_971 IPR020889 LPS-assembly protein LptD CH48_972 IPR027304 Trigger factor/SurA domain superfamily CH48_972 IPR015391 SurA N-terminal CH48_972 IPR023034 Peptidyl-prolyl isomerase SurA CH48_972 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type CH48_973 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase CH48_973 IPR005255 PdxA family CH48_974 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm CH48_974 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site CH48_974 IPR023165 rRNA adenine dimethylase-like CH48_974 IPR011530 Ribosomal RNA adenine dimethylase CH48_974 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal CH48_974 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH48_975 IPR036767 ApaG domain superfamily CH48_975 IPR007474 ApaG domain CH48_975 IPR023065 Uncharacterised protein family ApaG CH48_976 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) CH48_976 IPR029052 Metallo-dependent phosphatase-like CH48_976 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CH48_977 IPR024072 Dihydrofolate reductase-like domain superfamily CH48_977 IPR001796 Dihydrofolate reductase domain CH48_977 IPR012259 Dihydrofolate reductase CH48_977 IPR017925 Dihydrofolate reductase conserved site CH48_978 IPR020914 Uncharacterised protein family UPF0442 CH48_978 IPR024528 Threonine/Serine exporter, ThrE CH48_979 IPR010619 Putative threonine/serine exporter CH48_98 IPR042038 MukE, N-terminal domain CH48_98 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE CH48_98 IPR042037 MukE, C-terminal domain CH48_980 IPR001123 Amino acid exporter protein, LeuE-type CH48_980 IPR004778 Homoserine/Threonine efflux protein CH48_981 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain CH48_981 IPR036914 Methylglyoxal synthase-like domain superfamily CH48_981 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain CH48_981 IPR016185 Pre-ATP-grasp domain superfamily CH48_981 IPR011761 ATP-grasp fold CH48_981 IPR011607 Methylglyoxal synthase-like domain CH48_981 IPR006275 Carbamoyl-phosphate synthase, large subunit CH48_981 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain CH48_981 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily CH48_981 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain CH48_982 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain CH48_982 IPR029062 Class I glutamine amidotransferase-like CH48_982 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily CH48_982 IPR006274 Carbamoyl-phosphate synthase, small subunit CH48_982 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain CH48_982 IPR017926 Glutamine amidotransferase CH48_983 IPR022664 Dihydrodipicolinate reductase, conserved site CH48_983 IPR036291 NAD(P)-binding domain superfamily CH48_983 IPR022663 Dihydrodipicolinate reductase, C-terminal CH48_983 IPR000846 Dihydrodipicolinate reductase, N-terminal CH48_983 IPR023940 Dihydrodipicolinate reductase CH48_984 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase CH48_985 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CH48_986 IPR001872 Peptidase A8, signal peptidase II CH48_987 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CH48_987 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain CH48_987 IPR010663 Zinc finger, FPG/IleRS-type CH48_987 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding CH48_987 IPR023585 Isoleucine-tRNA ligase, type 1 CH48_987 IPR002301 Isoleucine-tRNA ligase CH48_987 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain CH48_987 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH48_987 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CH48_987 IPR002300 Aminoacyl-tRNA synthetase, class Ia CH48_988 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH48_988 IPR023465 Riboflavin kinase domain superfamily CH48_988 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic CH48_988 IPR002606 Riboflavin kinase, bacterial CH48_988 IPR015864 FAD synthetase CH48_988 IPR023468 Riboflavin kinase CH48_989 IPR002583 Ribosomal protein S20 CH48_989 IPR036510 Ribosomal protein S20 superfamily CH48_99 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_99 IPR005582 Chromosome partition protein MukF CH48_99 IPR033441 Chromosome partition protein MukF, C-terminal domain CH48_99 IPR033440 Chromosome partition protein MukF, middle domain CH48_99 IPR036141 MukF, middle domain superfamily CH48_99 IPR038198 MukF, C-terminal domain superfamily CH48_99 IPR036390 Winged helix DNA-binding domain superfamily CH48_99 IPR033439 Chromosome partition protein MukF, winged-helix domain CH48_990 IPR000847 Transcription regulator HTH, LysR CH48_990 IPR005119 LysR, substrate-binding CH48_990 IPR036388 Winged helix-like DNA-binding domain superfamily CH48_990 IPR036390 Winged helix DNA-binding domain superfamily CH48_991 IPR023171 Na/H antiporter domain superfamily CH48_991 IPR004670 Na+/H+ antiporter NhaA CH48_992 IPR018253 DnaJ domain, conserved site CH48_992 IPR012724 Chaperone DnaJ CH48_992 IPR002939 Chaperone DnaJ, C-terminal CH48_992 IPR008971 HSP40/DnaJ peptide-binding CH48_992 IPR001305 Heat shock protein DnaJ, cysteine-rich domain CH48_992 IPR001623 DnaJ domain CH48_992 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily CH48_992 IPR036869 Chaperone J-domain superfamily CH48_993 IPR012725 Chaperone DnaK CH48_993 IPR018181 Heat shock protein 70, conserved site CH48_993 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily CH48_993 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily CH48_993 IPR013126 Heat shock protein 70 family CH48_994 IPR000791 Acetate transporter GPR1/FUN34/SatP family CH48_997 IPR011701 Major facilitator superfamily CH48_997 IPR020846 Major facilitator superfamily domain CH48_997 IPR005829 Sugar transporter, conserved site CH48_997 IPR036259 MFS transporter superfamily CH48_998 IPR001453 MoaB/Mog domain CH48_998 IPR036425 MoaB/Mog-like domain superfamily CH48_998 IPR008284 Molybdenum cofactor biosynthesis, conserved site CH48_999 IPR001585 Transaldolase/Fructose-6-phosphate aldolase CH48_999 IPR018225 Transaldolase, active site CH48_999 IPR004730 Transaldolase type 1 CH48_999 IPR013785 Aldolase-type TIM barrel