LI89_00005	PF00258	Flavodoxin
LI89_00010	PF01037	AsnC family
LI89_00010	PF13404	AsnC-type helix-turn-helix domain
LI89_00015	PF03590	Aspartate-ammonia ligase
LI89_00020	PF07077	LI89_00020
LI89_00025	PF05762	VWA domain containing CoxE-like protein
LI89_00030	PF07728	AAA domain (dynein-related subfamily)
LI89_00030	PF12592	Protein of unknown function (DUF3763)
LI89_00035	PF02705	LI89_00035
LI89_00040	PF05025	RbsD / FucU transport protein family
LI89_00045	PF00005	ABC transporter
LI89_00050	PF02653	LI89_00050
LI89_00055	PF13407	Periplasmic binding protein domain
LI89_00060	PF00294	pfkB family carbohydrate kinase
LI89_00065	PF00356	Bacterial regulatory proteins, lacI family
LI89_00065	PF13377	Periplasmic binding protein-like domain
LI89_00070	PF07690	Major Facilitator Superfamily
LI89_00075	PF00392	Bacterial regulatory proteins, gntR family
LI89_00075	PF07729	FCD domain
LI89_00100	PF03205	Molybdopterin guanine dinucleotide synthesis protein B
LI89_00105	PF12804	MobA-like NTP transferase domain
LI89_00110	PF06288	Protein of unknown function (DUF1040)
LI89_00115	PF01636	Phosphotransferase enzyme family
LI89_00120	PF01323	DSBA-like thioredoxin domain
LI89_00125	PF00476	DNA polymerase family A
LI89_00125	PF01367	5'-3' exonuclease, C-terminal SAM fold
LI89_00125	PF01612	3'-5' exonuclease
LI89_00125	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
LI89_00130	PF01926	50S ribosome-binding GTPase
LI89_00135	PF04220	LI89_00135
LI89_00140	PF04055	Radical SAM superfamily
LI89_00140	PF06969	HemN C-terminal domain
LI89_00145	PF00072	Response regulator receiver domain
LI89_00145	PF00158	Sigma-54 interaction domain
LI89_00145	PF02954	Bacterial regulatory protein, Fis family
LI89_00150	PF00512	His Kinase A (phospho-acceptor) domain
LI89_00150	PF00989	PAS fold
LI89_00150	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
LI89_00155	PF00120	Glutamine synthetase, catalytic domain
LI89_00155	PF03951	Glutamine synthetase, beta-Grasp domain
LI89_00160	PF00009	Elongation factor Tu GTP binding domain
LI89_00160	PF00679	Elongation factor G C-terminus
LI89_00160	PF03144	Elongation factor Tu domain 2
LI89_00165	PF13419	Haloacid dehalogenase-like hydrolase
LI89_00170	PF03631	LI89_00170
LI89_00175	PF02580	D-Tyr-tRNA(Tyr) deacylase
LI89_00180	PF00583	Acetyltransferase (GNAT) family
LI89_00180	PF09500	Putative thioesterase (yiiD_Cterm)
LI89_00185	PF13693	Winged helix-turn-helix DNA-binding
LI89_00190	PF00196	Bacterial regulatory proteins, luxR family
LI89_00190	PF08448	PAS fold
LI89_00195	PF00196	Bacterial regulatory proteins, luxR family
LI89_00195	PF08448	PAS fold
LI89_00200	PF00196	Bacterial regulatory proteins, luxR family
LI89_00210	PF00860	Permease family
LI89_00215	PF03616	LI89_00215
LI89_00220	PF00270	DEAD/DEAH box helicase
LI89_00220	PF00271	Helicase conserved C-terminal domain
LI89_00220	PF17191	LI89_00220
LI89_00225	PF00588	SpoU rRNA Methylase family
LI89_00225	PF12105	SpoU, rRNA methylase, C-terminal
LI89_00230	PF02824	TGS domain
LI89_00230	PF04607	Region found in RelA / SpoT proteins
LI89_00230	PF13291	ACT domain
LI89_00230	PF13328	HD domain
LI89_00235	PF01192	RNA polymerase Rpb6
LI89_00240	PF00625	Guanylate kinase
LI89_00245	PF01653	NAD-dependent DNA ligase adenylation domain
LI89_00245	PF03120	NAD-dependent DNA ligase OB-fold domain
LI89_00250	PF03458	LI89_00250
LI89_00255	PF12098	LI89_00255
LI89_00260	PF01773	Na+ dependent nucleoside transporter N-terminus
LI89_00260	PF07662	Na+ dependent nucleoside transporter C-terminus
LI89_00260	PF07670	Nucleoside recognition
LI89_00265	PF00378	Enoyl-CoA hydratase/isomerase family
LI89_00270	PF00563	EAL domain
LI89_00270	PF00990	GGDEF domain
LI89_00270	PF13426	PAS domain
LI89_00280	PF00753	Metallo-beta-lactamase superfamily
LI89_00285	PF03755	LI89_00285
LI89_00285	PF08340	LI89_00285
LI89_00290	PF01138	3' exoribonuclease family, domain 1
LI89_00290	PF03725	3' exoribonuclease family, domain 2
LI89_00295	PF00156	Phosphoribosyl transferase domain
LI89_00300	PF00440	Bacterial regulatory proteins, tetR family
LI89_00305	PF00692	dUTPase
LI89_00310	PF02441	Flavoprotein
LI89_00310	PF04127	DNA / pantothenate metabolism flavoprotein
LI89_00315	PF04002	RadC-like JAB domain
LI89_00320	PF00830	Ribosomal L28 family
LI89_00325	PF00471	Ribosomal protein L33
LI89_00330	PF01149	Formamidopyrimidine-DNA glycosylase N-terminal domain
LI89_00330	PF06827	Zinc finger found in FPG and IleRS
LI89_00330	PF06831	Formamidopyrimidine-DNA glycosylase H2TH domain
LI89_00335	PF01467	Cytidylyltransferase
LI89_00340	PF00535	Glycosyl transferase family 2
LI89_00345	PF00534	Glycosyl transferases group 1
LI89_00345	PF04413	3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)
LI89_00350	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
LI89_00355	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
LI89_00360	PF01370	NAD dependent epimerase/dehydratase family
LI89_00365	PF00155	Aminotransferase class I and II
LI89_00370	PF00107	Zinc-binding dehydrogenase
LI89_00370	PF08240	Alcohol dehydrogenase GroES-like domain
LI89_00375	PF04748	Divergent polysaccharide deacetylase
LI89_00380	PF01551	Peptidase family M23
LI89_00385	PF01676	Metalloenzyme superfamily
LI89_00385	PF06415	BPG-independent PGAM N-terminus (iPGM_N)
LI89_00390	PF00581	Rhodanese-like domain
LI89_00395	PF00462	Glutaredoxin
LI89_00400	PF02556	Preprotein translocase subunit SecB
LI89_00405	PF01210	NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
LI89_00405	PF07479	NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
LI89_00410	PF00132	Bacterial transferase hexapeptide (six repeats)
LI89_00410	PF06426	Serine acetyltransferase, N-terminal
LI89_00415	PF00588	SpoU rRNA Methylase family
LI89_00420	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
LI89_00420	PF02805	Metal binding domain of Ada
LI89_00420	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
LI89_00420	PF12833	Helix-turn-helix domain
LI89_00425	PF00512	His Kinase A (phospho-acceptor) domain
LI89_00425	PF00672	HAMP domain
LI89_00425	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
LI89_00425	PF16527	LI89_00425
LI89_00430	PF00072	Response regulator receiver domain
LI89_00430	PF00486	Transcriptional regulatory protein, C terminal
LI89_00435	PF07813	LTXXQ motif family protein
LI89_00440	PF01545	Cation efflux family
LI89_00440	PF16916	LI89_00440
LI89_00445	PF00365	Phosphofructokinase
LI89_00450	PF13531	Bacterial extracellular solute-binding protein
LI89_00455	PF15644	Papain fold toxin 1
LI89_00460	PF00121	Triosephosphate isomerase
LI89_00465	PF07305	LI89_00465
LI89_00470	PF05656	LI89_00470
LI89_00475	PF00175	Oxidoreductase NAD-binding domain
LI89_00475	PF00970	Oxidoreductase FAD-binding domain
LI89_00480	PF07690	Major Facilitator Superfamily
LI89_00485	PF03320	Bacterial fructose-1,6-bisphosphatase, glpX-encoded
LI89_00490	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
LI89_00490	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
LI89_00495	PF00230	Major intrinsic protein
LI89_00505	PF06005	Protein of unknown function (DUF904)
LI89_00510	PF03737	Demethylmenaquinone methyltransferase
LI89_00515	PF01040	UbiA prenyltransferase family
LI89_00520	PF00004	ATPase family associated with various cellular activities (AAA)
LI89_00520	PF07724	AAA domain (Cdc48 subfamily)
LI89_00520	PF10431	C-terminal, D2-small domain, of ClpB protein
LI89_00525	PF00227	Proteasome subunit
LI89_00530	PF05036	Sporulation related domain
LI89_00535	PF00356	Bacterial regulatory proteins, lacI family
LI89_00535	PF13377	Periplasmic binding protein-like domain
LI89_00540	PF00270	DEAD/DEAH box helicase
LI89_00540	PF00271	Helicase conserved C-terminal domain
LI89_00545	PF01197	Ribosomal protein L31
LI89_00550	PF01340	Met Apo-repressor, MetJ
LI89_00555	PF01053	Cys/Met metabolism PLP-dependent enzyme
LI89_00560	PF00696	Amino acid kinase family
LI89_00560	PF00742	Homoserine dehydrogenase
LI89_00560	PF03447	Homoserine dehydrogenase, NAD binding domain
LI89_00565	PF02219	Methylenetetrahydrofolate reductase
LI89_00570	PF00311	Phosphoenolpyruvate carboxylase
LI89_00575	PF01546	Peptidase family M20/M25/M40
LI89_00575	PF07687	Peptidase dimerisation domain
LI89_00580	PF01118	Semialdehyde dehydrogenase, NAD binding domain
LI89_00580	PF02774	Semialdehyde dehydrogenase, dimerisation domain
LI89_00585	PF00696	Amino acid kinase family
LI89_00590	PF00206	Lyase
LI89_00590	PF14698	Argininosuccinate lyase C-terminal
LI89_00595	PF00593	TonB dependent receptor
LI89_00595	PF07715	TonB-dependent Receptor Plug Domain
LI89_00600	PF06438	Heme-binding protein A (HasA)
LI89_00605	PF06438	Heme-binding protein A (HasA)
LI89_00610	PF06438	Heme-binding protein A (HasA)
LI89_00615	PF06438	Heme-binding protein A (HasA)
LI89_00620	PF00005	ABC transporter
LI89_00620	PF00664	ABC transporter transmembrane region
LI89_00625	PF13437	HlyD family secretion protein
LI89_00625	PF13533	Biotin-lipoyl like
LI89_00630	PF03544	Gram-negative bacterial TonB protein C-terminal
LI89_00635	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
LI89_00635	PF07992	Pyridine nucleotide-disulphide oxidoreductase
LI89_00640	PF00462	Glutaredoxin
LI89_00640	PF08534	Redoxin
LI89_00645	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
LI89_00645	PF03466	LysR substrate binding domain
LI89_00650	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
LI89_00650	PF07992	Pyridine nucleotide-disulphide oxidoreductase
LI89_00655	PF00440	Bacterial regulatory proteins, tetR family
LI89_00660	PF07226	LI89_00660
LI89_00665	PF05958	tRNA (Uracil-5-)-methyltransferase
LI89_00670	PF00593	TonB dependent receptor
LI89_00670	PF07715	TonB-dependent Receptor Plug Domain
LI89_00675	PF01177	Asp/Glu/Hydantoin racemase
LI89_00705	PF10043	LI89_00705
LI89_00710	PF13091	PLD-like domain
LI89_00730	PF01177	Asp/Glu/Hydantoin racemase
LI89_00770	PF13407	Periplasmic binding protein domain
LI89_00775	PF00005	ABC transporter
LI89_00780	PF02653	LI89_00780
LI89_00785	PF02653	LI89_00785
LI89_00790	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
LI89_00790	PF03466	LysR substrate binding domain
LI89_00795	PF04219	LI89_00795
LI89_00800	PF01078	Magnesium chelatase, subunit ChlI
LI89_00800	PF13335	LI89_00800
LI89_00800	PF13541	Subunit ChlI of Mg-chelatase
LI89_00805	PF00205	Thiamine pyrophosphate enzyme, central domain
LI89_00805	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
LI89_00805	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
LI89_00810	PF13710	ACT domain
LI89_00815	PF01063	Aminotransferase class IV
LI89_00820	PF00920	Dehydratase family
LI89_00825	PF00291	Pyridoxal-phosphate dependent enzyme
LI89_00825	PF00585	C-terminal regulatory domain of Threonine dehydratase
LI89_00835	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
LI89_00835	PF03466	LysR substrate binding domain
LI89_00840	PF01450	Acetohydroxy acid isomeroreductase, catalytic domain
LI89_00840	PF07991	Acetohydroxy acid isomeroreductase, catalytic domain
LI89_00855	PF03513	Cloacin immunity protein
LI89_00860	PF01320	Colicin immunity protein / pyocin immunity protein
LI89_00865	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
LI89_00865	PF02753	Pili assembly chaperone PapD, C-terminal domain
LI89_00870	PF00419	Fimbrial protein
LI89_00875	PF00577	Outer membrane usher protein
LI89_00875	PF13953	PapC C-terminal domain
LI89_00875	PF13954	PapC N-terminal domain
LI89_00880	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
LI89_00880	PF02753	Pili assembly chaperone PapD, C-terminal domain
LI89_00890	PF13616	PPIC-type PPIASE domain
LI89_00895	PF00580	UvrD/REP helicase N-terminal domain
LI89_00895	PF13361	UvrD-like helicase C-terminal domain
LI89_00900	PF00041	Fibronectin type III domain
LI89_00900	PF00295	Glycosyl hydrolases family 28
LI89_00900	PF12708	Pectate lyase superfamily protein
LI89_00905	PF02541	Ppx/GppA phosphatase family
LI89_00910	PF00270	DEAD/DEAH box helicase
LI89_00910	PF00271	Helicase conserved C-terminal domain
LI89_00915	PF00085	Thioredoxin
LI89_00920	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
LI89_00920	PF07497	Rho termination factor, RNA-binding domain
LI89_00920	PF07498	Rho termination factor, N-terminal domain
LI89_00925	PF00953	Glycosyl transferase family 4
LI89_00930	PF02706	Chain length determinant protein
LI89_00935	PF02350	UDP-N-acetylglucosamine 2-epimerase
LI89_00940	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
LI89_00940	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
LI89_00940	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
LI89_00945	PF16363	LI89_00945
LI89_00950	PF00483	Nucleotidyl transferase
LI89_00955	PF00583	Acetyltransferase (GNAT) family
LI89_00960	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
LI89_00965	PF01943	LI89_00965
LI89_00970	PF07429	LI89_00970
LI89_00975	PF06899	LI89_00975
LI89_00980	PF03808	LI89_00980
LI89_00985	PF00324	Amino acid permease
LI89_01015	PF07219	LI89_01015
LI89_01020	PF04375	LI89_01020
LI89_01025	PF02602	Uroporphyrinogen-III synthase HemD
LI89_01030	PF01379	Porphobilinogen deaminase, dipyromethane cofactor binding domain
LI89_01030	PF03900	Porphobilinogen deaminase, C-terminal domain
LI89_01040	PF01295	LI89_01040
LI89_01040	PF12633	LI89_01040
LI89_01045	PF01491	Frataxin-like domain
LI89_01050	PF13627	LI89_01050
LI89_01055	PF01678	Diaminopimelate epimerase
LI89_01060	PF04340	Protein of unknown function, DUF484
LI89_01065	PF00589	Phage integrase family
LI89_01065	PF02899	Phage integrase, N-terminal SAM-like domain
LI89_01070	PF13419	Haloacid dehalogenase-like hydrolase
LI89_01075	PF00580	UvrD/REP helicase N-terminal domain
LI89_01075	PF13361	UvrD-like helicase C-terminal domain
LI89_01080	PF00440	Bacterial regulatory proteins, tetR family
LI89_01085	PF06792	Uncharacterised protein family (UPF0261)
LI89_01090	PF09370	TIM-barrel signal transduction protein
LI89_01095	PF01544	CorA-like Mg2+ transporter protein
LI89_01100	PF00892	EamA-like transporter family
LI89_01105	PF03061	Thioesterase superfamily
LI89_01110	PF02253	Phospholipase A1
LI89_01115	PF00270	DEAD/DEAH box helicase
LI89_01115	PF00271	Helicase conserved C-terminal domain
LI89_01115	PF00570	HRDC domain
LI89_01115	PF09382	RQC domain
LI89_01115	PF16124	LI89_01115
LI89_01120	PF01810	LI89_01120
LI89_01125	PF01810	LI89_01125
LI89_01130	PF12146	Putative lysophospholipase
LI89_01135	PF08282	haloacid dehalogenase-like hydrolase
LI89_01140	PF03009	Glycerophosphoryl diester phosphodiesterase family
LI89_01145	PF07690	Major Facilitator Superfamily
LI89_01155	PF01266	FAD dependent oxidoreductase
LI89_01155	PF04324	BFD-like [2Fe-2S] binding domain
LI89_01160	PF00890	FAD binding domain
LI89_01165	PF02754	LI89_01165
LI89_01165	PF13183	4Fe-4S dicluster domain
LI89_01170	PF08786	Domain of unknown function (DUF1795)
LI89_01175	PF02592	LI89_01175
LI89_01180	PF01206	Sulfurtransferase TusA
LI89_01185	PF00122	E1-E2 ATPase
LI89_01185	PF00403	Heavy-metal-associated domain
LI89_01185	PF00702	haloacid dehalogenase-like hydrolase
LI89_01190	PF07947	LI89_01190
LI89_01195	PF08850	LI89_01195
LI89_01200	PF10694	Protein of unknown function (DUF2500)
LI89_01205	PF06611	LI89_01205
LI89_01210	PF03602	Conserved hypothetical protein 95
LI89_01215	PF00448	SRP54-type protein, GTPase domain
LI89_01215	PF02881	SRP54-type protein, helical bundle domain
LI89_01220	PF00005	ABC transporter
LI89_01225	PF02687	LI89_01225
LI89_01230	PF00140	Sigma-70 factor, region 1
LI89_01230	PF04542	Sigma-70 region 2
LI89_01230	PF04545	Sigma-70, region 4
LI89_01235	PF12568	Acetyltransferase (GNAT) domain
LI89_01240	PF13458	Periplasmic binding protein
LI89_01245	PF02653	LI89_01245
LI89_01250	PF02653	LI89_01250
LI89_01250	PF11862	LI89_01250
LI89_01255	PF00005	ABC transporter
LI89_01255	PF12399	Branched-chain amino acid ATP-binding cassette transporter
LI89_01260	PF00005	ABC transporter
LI89_01285	PF16967	LI89_01285
LI89_01290	PF04449	CS1 type fimbrial major subunit
LI89_01295	PF13416	Bacterial extracellular solute-binding protein
LI89_01300	PF00528	Binding-protein-dependent transport system inner membrane component
LI89_01305	PF00528	Binding-protein-dependent transport system inner membrane component
LI89_01310	PF00005	ABC transporter
LI89_01310	PF08402	TOBE domain
LI89_01315	PF03009	Glycerophosphoryl diester phosphodiesterase family
LI89_01320	PF03547	LI89_01320
LI89_01330	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
LI89_01330	PF03466	LysR substrate binding domain
LI89_01335	PF01717	Cobalamin-independent synthase, Catalytic domain
LI89_01335	PF08267	Cobalamin-independent synthase, N-terminal domain
LI89_01340	PF01738	Dienelactone hydrolase family
LI89_01345	PF01048	Phosphorylase superfamily
LI89_01350	PF13350	Tyrosine phosphatase family
LI89_01355	PF02554	LI89_01355
LI89_01355	PF13722	LI89_01355
LI89_01360	PF09335	LI89_01360
LI89_01365	PF02646	LI89_01365
LI89_01370	PF01209	ubiE/COQ5 methyltransferase family
LI89_01375	PF02036	SCP-2 sterol transfer family
LI89_01380	PF03109	LI89_01380
LI89_01385	PF02416	mttA/Hcf106 family
LI89_01395	PF00902	Sec-independent protein translocase protein (TatC)
LI89_01400	PF01026	TatD related DNase
LI89_01405	PF00490	Delta-aminolevulinic acid dehydratase
LI89_01410	PF02357	Transcription termination factor nusG
LI89_01415	PF01977	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
LI89_01420	PF00175	Oxidoreductase NAD-binding domain
LI89_01420	PF00970	Oxidoreductase FAD-binding domain
LI89_01425	PF00108	Thiolase, N-terminal domain
LI89_01425	PF02803	Thiolase, C-terminal domain
LI89_01430	PF00378	Enoyl-CoA hydratase/isomerase family
LI89_01430	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
LI89_01430	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
LI89_01435	PF00557	Metallopeptidase family M24
LI89_01440	PF01205	Uncharacterized protein family UPF0029
LI89_01440	PF09186	Domain of unknown function (DUF1949)
LI89_01445	PF02386	Cation transport protein
LI89_01450	PF12724	Flavodoxin domain
LI89_01475	PF01565	FAD binding domain
LI89_01475	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
LI89_01480	PF02237	Biotin protein ligase C terminal domain
LI89_01480	PF03099	Biotin/lipoate A/B protein ligase family
LI89_01480	PF08279	HTH domain
LI89_01485	PF00485	Phosphoribulokinase / Uridine kinase family
LI89_01490	PF13673	Acetyltransferase (GNAT) domain
LI89_01515	PF00009	Elongation factor Tu GTP binding domain
LI89_01515	PF03143	Elongation factor Tu C-terminal domain
LI89_01515	PF03144	Elongation factor Tu domain 2
LI89_01520	PF00584	SecE/Sec61-gamma subunits of protein translocation complex
LI89_01525	PF00467	KOW motif
LI89_01525	PF02357	Transcription termination factor nusG
LI89_01530	PF00298	Ribosomal protein L11, RNA binding domain
LI89_01530	PF03946	Ribosomal protein L11, N-terminal domain
LI89_01535	PF00687	Ribosomal protein L1p/L10e family
LI89_01540	PF00466	Ribosomal protein L10
LI89_01545	PF00542	Ribosomal protein L7/L12 C-terminal domain
LI89_01545	PF16320	LI89_01545
LI89_01550	PF00562	RNA polymerase Rpb2, domain 6
LI89_01550	PF04560	RNA polymerase Rpb2, domain 7
LI89_01550	PF04561	RNA polymerase Rpb2, domain 2
LI89_01550	PF04563	RNA polymerase beta subunit
LI89_01550	PF04565	RNA polymerase Rpb2, domain 3
LI89_01550	PF10385	RNA polymerase beta subunit external 1 domain
LI89_01555	PF00623	RNA polymerase Rpb1, domain 2
LI89_01555	PF04983	RNA polymerase Rpb1, domain 3
LI89_01555	PF04997	RNA polymerase Rpb1, domain 1
LI89_01555	PF04998	RNA polymerase Rpb1, domain 5
LI89_01555	PF05000	RNA polymerase Rpb1, domain 4
LI89_01560	PF04055	Radical SAM superfamily
LI89_01560	PF06968	Biotin and Thiamin Synthesis associated domain
LI89_01565	PF05690	Thiazole biosynthesis protein ThiG
LI89_01570	PF02597	ThiS family
LI89_01575	PF00899	ThiF family
LI89_01580	PF02581	Thiamine monophosphate synthase/TENI
LI89_01585	PF01964	ThiC family
LI89_01585	PF13667	ThiC-associated domain
LI89_01590	PF04353	Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ
LI89_01595	PF00293	NUDIX domain
LI89_01595	PF09297	NADH pyrophosphatase zinc ribbon domain
LI89_01605	PF01208	Uroporphyrinogen decarboxylase (URO-D)
LI89_01610	PF04493	Endonuclease V
LI89_01615	PF04222	Protein of unknown function (DUF416)
LI89_01620	PF00216	Bacterial DNA-binding protein
LI89_01625	PF07356	LI89_01625
LI89_01630	PF01071	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
LI89_01630	PF02843	Phosphoribosylglycinamide synthetase, C domain
LI89_01630	PF02844	Phosphoribosylglycinamide synthetase, N domain
LI89_01635	PF01808	AICARFT/IMPCHase bienzyme
LI89_01635	PF02142	MGS-like domain
LI89_01675	PF12715	Abhydrolase family
LI89_01680	PF00474	Sodium:solute symporter family
LI89_01685	PF04341	LI89_01685
LI89_01690	PF00501	AMP-binding enzyme
LI89_01690	PF13193	AMP-binding enzyme C-terminal domain
LI89_01690	PF16177	LI89_01690
LI89_01695	PF00375	Sodium:dicarboxylate symporter family
LI89_01700	PF00072	Response regulator receiver domain
LI89_01700	PF00196	Bacterial regulatory proteins, luxR family
LI89_01705	PF00072	Response regulator receiver domain
LI89_01705	PF00512	His Kinase A (phospho-acceptor) domain
LI89_01705	PF01627	Hpt domain
LI89_01705	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
LI89_01715	PF00263	LI89_01715
LI89_01715	PF03958	Bacterial type II/III secretion system short domain
LI89_01720	PF16693	LI89_01720
LI89_01725	PF08988	Protein of unknown function (DUF1895)
LI89_01735	PF03433	EspA-like secreted protein
LI89_01740	PF12895	Anaphase-promoting complex, cyclosome, subunit 3
LI89_01745	PF04888	LI89_01745
LI89_01760	PF14559	Tetratricopeptide repeat
LI89_01770	PF12833	Helix-turn-helix domain
LI89_01775	PF09392	Type III secretion needle MxiH like
LI89_01780	PF06287	LI89_01780
LI89_01785	PF17001	LI89_01785
LI89_01790	PF01514	Secretory protein of YscJ/FliF family
LI89_01795	PF13327	LI89_01795
LI89_01805	PF07201	HrpJ-like domain
LI89_01805	PF09059	TyeA
LI89_01815	PF00771	FHIPEP family
LI89_01820	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
LI89_01835	PF01052	Surface presentation of antigens (SPOA)
LI89_01835	PF06622	LI89_01835
LI89_01840	PF00813	LI89_01840
LI89_01845	PF01313	LI89_01845
LI89_01850	PF01311	LI89_01850
LI89_01855	PF01312	FlhB HrpN YscU SpaS Family
LI89_01860	PF04143	LI89_01860
LI89_01865	PF01206	Sulfurtransferase TusA
LI89_01870	PF03544	Gram-negative bacterial TonB protein C-terminal
LI89_01880	PF04542	Sigma-70 region 2
LI89_01880	PF08281	Sigma-70, region 4
LI89_01885	PF04773	FecR protein
LI89_01885	PF16220	LI89_01885
LI89_01890	PF07660	Secretin and TonB N terminus short domain
LI89_01890	PF07715	TonB-dependent Receptor Plug Domain
LI89_01895	PF00005	ABC transporter
LI89_01895	PF06472	LI89_01895
LI89_01900	PF00675	Insulinase (Peptidase family M16)
LI89_01900	PF05193	Peptidase M16 inactive domain
LI89_01905	PF00924	Mechanosensitive ion channel
LI89_01905	PF12607	LI89_01905
LI89_01910	PF00593	TonB dependent receptor
LI89_01910	PF07715	TonB-dependent Receptor Plug Domain
LI89_01915	PF06568	LI89_01915
LI89_01920	PF00155	Aminotransferase class I and II
LI89_01920	PF00392	Bacterial regulatory proteins, gntR family
LI89_01925	PF00005	ABC transporter
LI89_01930	PF01032	FecCD transport family
LI89_01935	PF01497	Periplasmic binding protein
LI89_01940	PF05171	Haemin-degrading HemS
LI89_01945	PF00593	TonB dependent receptor
LI89_01945	PF07715	TonB-dependent Receptor Plug Domain
LI89_01950	PF10636	Hemin uptake protein hemP
LI89_01955	PF13460	NADH(P)-binding
LI89_01960	PF06228	Haem utilisation ChuX/HutX
LI89_01965	PF04055	Radical SAM superfamily
LI89_01970	PF00291	Pyridoxal-phosphate dependent enzyme
LI89_01975	PF01490	LI89_01975
LI89_01980	PF00871	Acetokinase family
LI89_01985	PF01228	Glycine radical
LI89_01985	PF02901	Pyruvate formate lyase
LI89_01995	PF00440	Bacterial regulatory proteins, tetR family
LI89_02000	PF02595	Glycerate kinase family
LI89_02005	PF02683	LI89_02005
LI89_02005	PF11412	Disulphide bond corrector protein DsbC
LI89_02005	PF13899	Thioredoxin-like
LI89_02010	PF03091	CutA1 divalent ion tolerance protein
LI89_02015	PF03605	LI89_02015
LI89_02020	PF00206	Lyase
LI89_02020	PF10415	Fumarase C C-terminus
LI89_02025	PF04186	LI89_02025
LI89_02030	PF00166	Chaperonin 10 Kd subunit
LI89_02035	PF00118	TCP-1/cpn60 chaperonin family
LI89_02045	PF13698	LI89_02045
LI89_02050	PF04055	Radical SAM superfamily
LI89_02050	PF13353	4Fe-4S single cluster domain
LI89_02055	PF01132	Elongation factor P (EF-P) OB domain
LI89_02055	PF08207	Elongation factor P (EF-P) KOW-like domain
LI89_02055	PF09285	Elongation factor P, C-terminal
LI89_02060	PF08085	LI89_02060
LI89_02065	PF00893	Small Multidrug Resistance protein
LI89_02070	PF08212	Lipocalin-like domain
LI89_02075	PF02313	Fumarate reductase subunit D
LI89_02080	PF02300	Fumarate reductase subunit C
LI89_02085	PF13085	2Fe-2S iron-sulfur cluster binding domain
LI89_02085	PF13183	4Fe-4S dicluster domain
LI89_02090	PF00890	FAD binding domain
LI89_02090	PF02910	Fumarate reductase flavoprotein C-term
LI89_02095	PF00152	tRNA synthetases class II (D, K and N)
LI89_02100	PF00924	Mechanosensitive ion channel
LI89_02100	PF12794	LI89_02100
LI89_02100	PF12795	LI89_02100
LI89_02105	PF02666	LI89_02105
LI89_02110	PF03193	Protein of unknown function, DUF258
LI89_02115	PF00929	Exonuclease
LI89_02135	PF08331	LI89_02135
LI89_02135	PF13484	LI89_02135
LI89_02140	PF01256	Carbohydrate kinase
LI89_02140	PF03853	YjeF-related protein N-terminus
LI89_02145	PF02367	Uncharacterised P-loop hydrolase UPF0079
LI89_02150	PF01476	LysM domain
LI89_02150	PF01520	N-acetylmuramoyl-L-alanine amidase
LI89_02150	PF11741	AMIN domain
LI89_02155	PF01119	DNA mismatch repair protein, C-terminal domain
LI89_02155	PF08676	MutL C terminal dimerisation domain
LI89_02155	PF13589	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
LI89_02160	PF01715	IPP transferase
LI89_02165	PF17209	LI89_02165
LI89_02170	PF01926	50S ribosome-binding GTPase
LI89_02170	PF13167	LI89_02170
LI89_02170	PF16360	LI89_02170
LI89_02175	PF01145	SPFH domain / Band 7 family
LI89_02175	PF12221	LI89_02175
LI89_02180	PF01145	SPFH domain / Band 7 family
LI89_02185	PF09838	LI89_02185
LI89_02190	PF00709	Adenylosuccinate synthetase
LI89_02195	PF02082	Transcriptional regulator
LI89_02200	PF00575	S1 RNA binding domain
LI89_02200	PF00773	RNB domain
LI89_02200	PF08206	Ribonuclease B OB domain
LI89_02200	PF08461	Ribonuclease R winged-helix domain
LI89_02205	PF00588	SpoU rRNA Methylase family
LI89_02205	PF08032	RNA 2'-O ribose methyltransferase substrate binding
LI89_02210	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
LI89_02210	PF02770	Acyl-CoA dehydrogenase, middle domain
LI89_02215	PF07338	Protein of unknown function (DUF1471)
LI89_02220	PF00326	Prolyl oligopeptidase family
LI89_02225	PF07338	Protein of unknown function (DUF1471)
LI89_02230	PF01250	Ribosomal protein S6
LI89_02235	PF00436	Single-strand binding protein family
LI89_02240	PF01084	Ribosomal protein S18
LI89_02245	PF01281	Ribosomal protein L9, N-terminal domain
LI89_02245	PF03948	Ribosomal protein L9, C-terminal domain
LI89_02250	PF12582	LI89_02250
LI89_02255	PF04225	Opacity-associated protein A LysM-like domain
LI89_02255	PF08525	LI89_02255
LI89_02265	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
LI89_02265	PF01346	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
LI89_02270	PF01814	Hemerythrin HHE cation binding domain
LI89_02270	PF04405	LI89_02270
LI89_02275	PF00149	Calcineurin-like phosphoesterase
LI89_02275	PF02872	5'-nucleotidase, C-terminal domain
LI89_02280	PF00459	Inositol monophosphatase family
LI89_02285	PF09695	LI89_02285
LI89_02290	PF06526	Protein of unknown function (DUF1107)
LI89_02295	PF00571	CBS domain
LI89_02295	PF01595	LI89_02295
LI89_02295	PF03471	Transporter associated domain
LI89_02300	PF01625	Peptide methionine sulfoxide reductase
LI89_02305	PF01103	Surface antigen
LI89_02305	PF07244	Surface antigen variable number repeat
LI89_02305	PF17243	LI89_02305
LI89_02310	PF04357	LI89_02310
LI89_02315	PF06094	AIG2-like family
LI89_02320	PF00719	Inorganic pyrophosphatase
LI89_02325	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
LI89_02325	PF02203	Tar ligand binding domain homologue
LI89_02330	PF00316	Fructose-1-6-bisphosphatase
LI89_02335	PF01225	Mur ligase family, catalytic domain
LI89_02335	PF02875	Mur ligase family, glutamate ligase domain
LI89_02335	PF08245	Mur ligase middle domain
LI89_02340	PF07338	Protein of unknown function (DUF1471)
LI89_02345	PF01316	Arginine repressor, DNA binding domain
LI89_02345	PF02863	Arginine repressor, C-terminal domain
LI89_02350	PF00056	lactate/malate dehydrogenase, NAD binding domain
LI89_02350	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
LI89_02355	PF13693	Winged helix-turn-helix DNA-binding
LI89_02360	PF02316	Mu DNA-binding domain
LI89_02365	PF00348	Polyprenyl synthetase
LI89_02370	PF00829	Ribosomal prokaryotic L21 protein
LI89_02375	PF01016	Ribosomal L27 protein
LI89_02380	PF00892	EamA-like transporter family
LI89_02385	PF01018	GTP1/OBG
LI89_02385	PF01926	50S ribosome-binding GTPase
LI89_02390	PF00512	His Kinase A (phospho-acceptor) domain
LI89_02390	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
LI89_02395	PF00072	Response regulator receiver domain
LI89_02395	PF00486	Transcriptional regulatory protein, C terminal
LI89_02400	PF02113	D-Ala-D-Ala carboxypeptidase 3 (S13) family
LI89_02405	PF01272	Transcription elongation factor, GreA/GreB, C-term
LI89_02405	PF03449	Transcription elongation factor, N-terminal
LI89_02410	PF01985	CRS1 / YhbY (CRM) domain
LI89_02415	PF01728	FtsJ-like methyltransferase
LI89_02420	PF00004	ATPase family associated with various cellular activities (AAA)
LI89_02420	PF01434	Peptidase family M41
LI89_02420	PF06480	FtsH Extracellular
LI89_02425	PF00809	Pterin binding enzyme
LI89_02430	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
LI89_02430	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
LI89_02430	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
LI89_02430	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
LI89_02435	PF03840	Preprotein translocase SecG subunit
LI89_02450	PF02576	Uncharacterised BCR, YhbC family COG0779
LI89_02450	PF17384	LI89_02450
LI89_02455	PF08529	NusA N-terminal domain
LI89_02455	PF13184	NusA-like KH domain
LI89_02455	PF14520	Helix-hairpin-helix domain
LI89_02460	PF00009	Elongation factor Tu GTP binding domain
LI89_02460	PF03144	Elongation factor Tu domain 2
LI89_02460	PF04760	Translation initiation factor IF-2, N-terminal region
LI89_02460	PF08364	LI89_02460
LI89_02460	PF11987	Translation-initiation factor 2
LI89_02465	PF02033	Ribosome-binding factor A
LI89_02470	PF01509	TruB family pseudouridylate synthase (N terminal domain)
LI89_02470	PF09157	Pseudouridine synthase II TruB, C-terminal
LI89_02470	PF16198	LI89_02470
LI89_02475	PF00312	Ribosomal protein S15
LI89_02480	PF00013	KH domain
LI89_02480	PF00575	S1 RNA binding domain
LI89_02480	PF01138	3' exoribonuclease family, domain 1
LI89_02480	PF03725	3' exoribonuclease family, domain 2
LI89_02480	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
LI89_02485	PF07719	Tetratricopeptide repeat
LI89_02485	PF13181	Tetratricopeptide repeat
LI89_02490	PF00270	DEAD/DEAH box helicase
LI89_02490	PF00271	Helicase conserved C-terminal domain
LI89_02490	PF03880	DbpA RNA binding domain
LI89_02490	PF12343	LI89_02490
LI89_02500	PF00296	Luciferase-like monooxygenase
LI89_02505	PF16576	LI89_02505
LI89_02510	PF00873	AcrB/AcrD/AcrF family
LI89_02515	PF02321	Outer membrane efflux protein
LI89_02525	PF03313	LI89_02525
LI89_02530	PF01136	LI89_02530
LI89_02535	PF01136	LI89_02535
LI89_02540	PF02036	SCP-2 sterol transfer family
LI89_02545	PF13508	Acetyltransferase (GNAT) domain
LI89_02550	PF01541	GIY-YIG catalytic domain
LI89_02555	PF13520	Amino acid permease
LI89_02560	PF01276	Orn/Lys/Arg decarboxylase, major domain
LI89_02560	PF03709	Orn/Lys/Arg decarboxylase, N-terminal domain
LI89_02560	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
LI89_02570	PF07940	Heparinase II/III-like protein
LI89_02575	PF05426	Alginate lyase
LI89_02580	PF01547	Bacterial extracellular solute-binding protein
LI89_02585	PF00528	Binding-protein-dependent transport system inner membrane component
LI89_02590	PF00528	Binding-protein-dependent transport system inner membrane component
LI89_02595	PF00005	ABC transporter
LI89_02595	PF08402	TOBE domain
LI89_02600	PF05426	Alginate lyase
LI89_02620	PF12706	Beta-lactamase superfamily domain
LI89_02625	PF13238	AAA domain
LI89_02630	PF07969	Amidohydrolase family
LI89_02635	PF00005	ABC transporter
LI89_02640	PF00005	ABC transporter
LI89_02645	PF06007	LI89_02645
LI89_02650	PF05861	LI89_02650
LI89_02655	PF05845	Bacterial phosphonate metabolism protein (PhnH)
LI89_02660	PF06754	LI89_02660
LI89_02665	PF00392	Bacterial regulatory proteins, gntR family
LI89_02665	PF07702	UTRA domain
LI89_02670	PF15984	LI89_02670
LI89_02675	PF03865	Haemolysin secretion/activation protein ShlB/FhaC/HecB
LI89_02675	PF08479	POTRA domain, ShlB-type
LI89_02680	PF13353	4Fe-4S single cluster domain
LI89_02685	PF03477	ATP cone domain
LI89_02685	PF13597	Anaerobic ribonucleoside-triphosphate reductase
LI89_02690	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
LI89_02690	PF03466	LysR substrate binding domain
LI89_02695	PF02525	Flavodoxin-like fold
LI89_02710	PF00005	ABC transporter
LI89_02715	PF00005	ABC transporter
LI89_02720	PF00528	Binding-protein-dependent transport system inner membrane component
LI89_02720	PF12911	LI89_02720
LI89_02725	PF00528	Binding-protein-dependent transport system inner membrane component
LI89_02730	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
LI89_02735	PF04074	Domain of unknown function (DUF386)
LI89_02740	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
LI89_02740	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
LI89_02745	PF06877	Regulator of ribonuclease activity B
LI89_02750	PF00583	Acetyltransferase (GNAT) family
LI89_02755	PF00133	tRNA synthetases class I (I, L, M and V)
LI89_02755	PF08264	Anticodon-binding domain of tRNA
LI89_02755	PF10458	Valyl tRNA synthetase tRNA binding arm
LI89_02760	PF04364	DNA polymerase III chi subunit, HolC
LI89_02765	PF00883	Cytosol aminopeptidase family, catalytic domain
LI89_02765	PF02789	Cytosol aminopeptidase family, N-terminal domain
LI89_02770	PF03739	LI89_02770
LI89_02775	PF03739	LI89_02775
LI89_02785	PF00589	Phage integrase family
LI89_02785	PF13356	Domain of unknown function (DUF4102)
LI89_02790	PF01555	DNA methylase
LI89_02795	PF04851	Type III restriction enzyme, res subunit
LI89_02800	PF12358	LI89_02800
LI89_02805	PF04917	LI89_02805
LI89_02810	PF06412	LI89_02810
LI89_02825	PF03389	MobA/MobL family
LI89_02860	PF05930	Prophage CP4-57 regulatory protein (AlpA)
LI89_02875	PF13087	AAA domain
LI89_02880	PF00583	Acetyltransferase (GNAT) family
LI89_02885	PF00196	Bacterial regulatory proteins, luxR family
LI89_02885	PF08448	PAS fold
LI89_02890	PF02133	Permease for cytosine/purines, uracil, thiamine, allantoin
LI89_02895	PF02133	Permease for cytosine/purines, uracil, thiamine, allantoin
LI89_02900	PF13391	LI89_02900
LI89_02905	PF10696	LI89_02905
LI89_02915	PF03992	Antibiotic biosynthesis monooxygenase
LI89_02920	PF01791	DeoC/LacD family aldolase
LI89_02925	PF13407	Periplasmic binding protein domain
LI89_02930	PF02653	LI89_02930
LI89_02935	PF02653	LI89_02935
LI89_02940	PF00005	ABC transporter
LI89_02945	PF04198	Putative sugar-binding domain
LI89_02950	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
LI89_02950	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
LI89_02955	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
LI89_02960	PF04932	LI89_02960
LI89_02970	PF13520	Amino acid permease
LI89_02975	PF02274	Amidinotransferase
LI89_02980	PF16576	LI89_02980
LI89_02985	PF00873	AcrB/AcrD/AcrF family
LI89_02990	PF00465	Iron-containing alcohol dehydrogenase
LI89_02995	PF02733	Dak1 domain
LI89_03000	PF02734	DAK2 domain
LI89_03005	PF00381	PTS HPr component phosphorylation site
LI89_03005	PF00391	PEP-utilising enzyme, mobile domain
LI89_03005	PF03610	PTS system fructose IIA component
LI89_03005	PF05524	PEP-utilising enzyme, N-terminal
LI89_03010	PF00534	Glycosyl transferases group 1
LI89_03015	PF02543	Carbamoyltransferase
LI89_03015	PF16861	LI89_03015
LI89_03030	PF07690	Major Facilitator Superfamily
LI89_03035	PF10014	2OG-Fe dioxygenase
LI89_03040	PF01095	Pectinesterase
LI89_03045	PF00158	Sigma-54 interaction domain
LI89_03045	PF00989	PAS fold
LI89_03045	PF02954	Bacterial regulatory protein, Fis family
LI89_03050	PF00356	Bacterial regulatory proteins, lacI family
LI89_03050	PF13377	Periplasmic binding protein-like domain
LI89_03055	PF00251	Glycosyl hydrolases family 32 N-terminal domain
LI89_03055	PF08244	Glycosyl hydrolases family 32 C terminal
LI89_03060	PF00367	phosphotransferase system, EIIB
LI89_03060	PF02378	Phosphotransferase system, EIIC
LI89_03065	PF02264	LamB porin
LI89_03065	PF11471	LI89_03065
LI89_03070	PF00294	pfkB family carbohydrate kinase
LI89_03075	PF01497	Periplasmic binding protein
LI89_03080	PF00593	TonB dependent receptor
LI89_03080	PF07715	TonB-dependent Receptor Plug Domain
LI89_03085	PF00990	GGDEF domain
LI89_03090	PF07256	LI89_03090
LI89_03105	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
LI89_03105	PF03466	LysR substrate binding domain
LI89_03110	PF00248	Aldo/keto reductase family
LI89_03115	PF05175	Methyltransferase small domain
LI89_03115	PF08468	Methyltransferase small domain N-terminal
LI89_03120	PF03603	DNA polymerase III psi subunit
LI89_03125	PF00583	Acetyltransferase (GNAT) family
LI89_03130	PF00009	Elongation factor Tu GTP binding domain
LI89_03130	PF03144	Elongation factor Tu domain 2
LI89_03130	PF16658	LI89_03130
LI89_03135	PF04972	BON domain
LI89_03145	PF01734	Patatin-like phospholipase
LI89_03150	PF01026	TatD related DNase
LI89_03155	PF01773	Na+ dependent nucleoside transporter N-terminus
LI89_03155	PF07662	Na+ dependent nucleoside transporter C-terminus
LI89_03155	PF07670	Nucleoside recognition
LI89_03160	PF01791	DeoC/LacD family aldolase
LI89_03165	PF00591	Glycosyl transferase family, a/b domain
LI89_03165	PF02885	Glycosyl transferase family, helical bundle domain
LI89_03165	PF07831	Pyrimidine nucleoside phosphorylase C-terminal domain
LI89_03170	PF01676	Metalloenzyme superfamily
LI89_03175	PF01048	Phosphorylase superfamily
LI89_03180	PF10144	LI89_03180
LI89_03185	PF12710	haloacid dehalogenase-like hydrolase
LI89_03190	PF13481	AAA domain
LI89_03190	PF13541	Subunit ChlI of Mg-chelatase
LI89_03200	PF01548	LI89_03200
LI89_03200	PF02371	LI89_03200
LI89_03210	PF01381	Helix-turn-helix
LI89_03210	PF13521	AAA domain
LI89_03215	PF08240	Alcohol dehydrogenase GroES-like domain
LI89_03215	PF13602	Zinc-binding dehydrogenase
LI89_03220	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
LI89_03220	PF03466	LysR substrate binding domain
LI89_03225	PF00005	ABC transporter
LI89_03225	PF12848	ABC transporter
LI89_03230	PF00691	OmpA family
LI89_03235	PF00990	GGDEF domain
LI89_03235	PF17152	LI89_03235
LI89_03240	PF13689	LI89_03240
LI89_03245	PF00122	E1-E2 ATPase
LI89_03245	PF00689	Cation transporting ATPase, C-terminus
LI89_03245	PF00690	Cation transporter/ATPase, N-terminus
LI89_03245	PF00702	haloacid dehalogenase-like hydrolase
LI89_03250	PF01464	Transglycosylase SLT domain
LI89_03250	PF14718	Soluble lytic murein transglycosylase L domain
LI89_03255	PF01371	Trp repressor protein
LI89_03260	PF01931	Protein of unknown function DUF84
LI89_03265	PF00300	Histidine phosphatase superfamily (branch 1)
LI89_03270	PF06445	GyrI-like small molecule binding domain
LI89_03270	PF12833	Helix-turn-helix domain
LI89_03275	PF05981	LI89_03275
LI89_03280	PF00072	Response regulator receiver domain
LI89_03280	PF00486	Transcriptional regulatory protein, C terminal
LI89_03290	PF00696	Amino acid kinase family
LI89_03290	PF00742	Homoserine dehydrogenase
LI89_03290	PF01842	ACT domain
LI89_03290	PF03447	Homoserine dehydrogenase, NAD binding domain
LI89_03290	PF13840	ACT domain
LI89_03295	PF00288	GHMP kinases N terminal domain
LI89_03295	PF08544	GHMP kinases C terminal
LI89_03300	PF00291	Pyridoxal-phosphate dependent enzyme
LI89_03300	PF14821	Threonine synthase N terminus
LI89_03305	PF03883	LI89_03305
LI89_03310	PF00923	Transaldolase
LI89_03315	PF00994	Probable molybdopterin binding domain
LI89_03320	PF07690	Major Facilitator Superfamily
LI89_03330	PF01184	LI89_03330
LI89_03335	PF00012	Hsp70 protein
LI89_03340	PF00226	DnaJ domain
LI89_03340	PF00684	DnaJ central domain
LI89_03340	PF01556	DnaJ C terminal domain
LI89_03345	PF06965	Na+/H+ antiporter 1
LI89_03350	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
LI89_03350	PF03466	LysR substrate binding domain
LI89_03355	PF01649	Ribosomal protein S20
LI89_03360	PF01687	Riboflavin kinase
LI89_03360	PF06574	FAD synthetase
LI89_03365	PF00133	tRNA synthetases class I (I, L, M and V)
LI89_03365	PF06827	Zinc finger found in FPG and IleRS
LI89_03365	PF08264	Anticodon-binding domain of tRNA
LI89_03370	PF01252	LI89_03370
LI89_03375	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
LI89_03380	PF02401	LytB protein
LI89_03385	PF01113	Dihydrodipicolinate reductase, N-terminus
LI89_03385	PF05173	Dihydrodipicolinate reductase, C-terminus
LI89_03390	PF00117	Glutamine amidotransferase class-I
LI89_03390	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain
LI89_03395	PF02142	MGS-like domain
LI89_03395	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
LI89_03395	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
LI89_03400	PF01810	LI89_03400
LI89_03405	PF06738	LI89_03405
LI89_03410	PF12821	LI89_03410
LI89_03415	PF00186	Dihydrofolate reductase
LI89_03420	PF00149	Calcineurin-like phosphoesterase
LI89_03425	PF04379	Protein of unknown function (DUF525)
LI89_03430	PF00398	Ribosomal RNA adenine dimethylase
LI89_03435	PF04166	Pyridoxal phosphate biosynthetic protein PdxA
LI89_03440	PF00639	PPIC-type PPIASE domain
LI89_03440	PF09312	SurA N-terminal domain
LI89_03445	PF03968	OstA-like protein
LI89_03445	PF04453	Organic solvent tolerance protein
LI89_03450	PF00226	DnaJ domain
LI89_03450	PF05099	Tellurite resistance protein TerB
LI89_03455	PF00849	RNA pseudouridylate synthase
LI89_03460	PF02369	Bacterial Ig-like domain (group 1)
LI89_03460	PF09134	Invasin, domain 3
LI89_03460	PF11924	Protein of unknown function (DUF3442)
LI89_03465	PF00176	SNF2 family N-terminal domain
LI89_03465	PF00271	Helicase conserved C-terminal domain
LI89_03465	PF12137	RNA polymerase recycling family C-terminal
LI89_03475	PF00136	DNA polymerase family B
LI89_03475	PF03104	DNA polymerase family B, exonuclease domain
LI89_03480	PF09335	LI89_03480
LI89_03485	PF00005	ABC transporter
LI89_03490	PF00528	Binding-protein-dependent transport system inner membrane component
LI89_03495	PF13343	Bacterial extracellular solute-binding protein
LI89_03510	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
LI89_03510	PF12793	LI89_03510
LI89_03515	PF04055	Radical SAM superfamily
LI89_03515	PF13353	4Fe-4S single cluster domain
LI89_03520	PF01228	Glycine radical
LI89_03520	PF02901	Pyruvate formate lyase
LI89_03525	PF07690	Major Facilitator Superfamily
LI89_03530	PF03222	Tryptophan/tyrosine permease family
LI89_03535	PF01212	Beta-eliminating lyase
LI89_03545	PF00694	Aconitase C-terminal domain
LI89_03550	PF00330	Aconitase family (aconitate hydratase)
LI89_03555	PF00180	Isocitrate/isopropylmalate dehydrogenase
LI89_03560	PF00682	HMGL-like
LI89_03560	PF08502	LeuA allosteric (dimerisation) domain
LI89_03565	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
LI89_03565	PF03466	LysR substrate binding domain
LI89_03570	PF00501	AMP-binding enzyme
LI89_03575	PF00205	Thiamine pyrophosphate enzyme, central domain
LI89_03575	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
LI89_03575	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
LI89_03580	PF01842	ACT domain
LI89_03580	PF10369	Small subunit of acetolactate synthase
LI89_03585	PF00356	Bacterial regulatory proteins, lacI family
LI89_03585	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
LI89_03590	PF06610	LI89_03590
LI89_03595	PF02381	MraZ protein
LI89_03600	PF01795	MraW methylase family
LI89_03605	PF04999	LI89_03605
LI89_03610	PF00905	Penicillin binding protein transpeptidase domain
LI89_03610	PF03717	Penicillin-binding Protein dimerisation domain
LI89_03615	PF01225	Mur ligase family, catalytic domain
LI89_03615	PF02875	Mur ligase family, glutamate ligase domain
LI89_03615	PF08245	Mur ligase middle domain
LI89_03620	PF01225	Mur ligase family, catalytic domain
LI89_03620	PF02875	Mur ligase family, glutamate ligase domain
LI89_03620	PF08245	Mur ligase middle domain
LI89_03625	PF00953	Glycosyl transferase family 4
LI89_03625	PF10555	Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1
LI89_03630	PF02875	Mur ligase family, glutamate ligase domain
LI89_03630	PF08245	Mur ligase middle domain
LI89_03635	PF01098	LI89_03635
LI89_03640	PF03033	Glycosyltransferase family 28 N-terminal domain
LI89_03640	PF04101	Glycosyltransferase family 28 C-terminal domain
LI89_03645	PF01225	Mur ligase family, catalytic domain
LI89_03645	PF02875	Mur ligase family, glutamate ligase domain
LI89_03645	PF08245	Mur ligase middle domain
LI89_03650	PF01820	D-ala D-ala ligase N-terminus
LI89_03650	PF07478	D-ala D-ala ligase C-terminus
LI89_03655	PF03799	Cell division protein FtsQ
LI89_03655	PF08478	POTRA domain, FtsQ-type
LI89_03660	PF02491	SHS2 domain inserted in FTSA
LI89_03660	PF14450	Cell division protein FtsA
LI89_03665	PF00091	Tubulin/FtsZ family, GTPase domain
LI89_03665	PF12327	FtsZ family, C-terminal domain
LI89_03670	PF03331	UDP-3-O-acyl N-acetylglycosamine deacetylase
LI89_03675	PF05258	LI89_03675
LI89_03680	PF06558	LI89_03680
LI89_03685	PF01043	SecA preprotein cross-linking domain
LI89_03685	PF02810	SEC-C motif
LI89_03685	PF07516	SecA Wing and Scaffold domain
LI89_03685	PF07517	SecA DEAD-like domain
LI89_03690	PF00293	NUDIX domain
LI89_03695	PF03884	Domain of unknown function (DUF329)
LI89_03700	PF07072	Protein of unknown function (DUF1342)
LI89_03705	PF01121	Dephospho-CoA kinase
LI89_03710	PF00478	IMP dehydrogenase / GMP reductase domain
LI89_03715	PF00482	Type II secretion system (T2SS), protein F
LI89_03720	PF00437	Type II/IV secretion system protein
LI89_03720	PF05157	Type II secretion system (T2SS), protein E, N-terminal domain
LI89_03725	PF07963	Prokaryotic N-terminal methylation motif
LI89_03730	PF01729	Quinolinate phosphoribosyl transferase, C-terminal domain
LI89_03730	PF02749	Quinolinate phosphoribosyl transferase, N-terminal domain
LI89_03735	PF01510	N-acetylmuramoyl-L-alanine amidase
LI89_03740	PF17113	LI89_03740
LI89_03745	PF00324	Amino acid permease
LI89_03750	PF00392	Bacterial regulatory proteins, gntR family
LI89_03750	PF07729	FCD domain
LI89_03755	PF00456	Transketolase, thiamine diphosphate binding domain
LI89_03760	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
LI89_03760	PF00364	Biotin-requiring enzyme
LI89_03760	PF02817	e3 binding domain
LI89_03765	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
LI89_03765	PF07992	Pyridine nucleotide-disulphide oxidoreductase
LI89_03770	PF03496	ADP-ribosyltransferase exoenzyme
LI89_03775	PF12833	Helix-turn-helix domain
LI89_03780	PF00593	TonB dependent receptor
LI89_03780	PF07715	TonB-dependent Receptor Plug Domain
LI89_03785	PF00330	Aconitase family (aconitate hydratase)
LI89_03785	PF06434	Aconitate hydratase 2 N-terminus
LI89_03785	PF11791	Aconitate B N-terminal domain
LI89_03790	PF06062	LI89_03790
LI89_03795	PF00892	EamA-like transporter family
LI89_03805	PF07262	Protein of unknown function (DUF1436)
LI89_03815	PF05973	LI89_03815
LI89_03820	PF13744	Helix-turn-helix domain
LI89_03825	PF02675	S-adenosylmethionine decarboxylase
LI89_03830	PF01564	Spermine/spermidine synthase
LI89_03830	PF17284	LI89_03830
LI89_03835	PF09691	Bacterial chaperone lipoprotein (PulS_OutS)
LI89_03840	PF00394	Multicopper oxidase
LI89_03840	PF07731	Multicopper oxidase
LI89_03840	PF07732	Multicopper oxidase
LI89_03840	PF10518	TAT (twin-arginine translocation) pathway signal sequence
LI89_03850	PF00156	Phosphoribosyl transferase domain
LI89_03855	PF00484	Carbonic anhydrase
LI89_03860	PF00005	ABC transporter
LI89_03865	PF01061	LI89_03865
LI89_03870	PF01522	Polysaccharide deacetylase
LI89_03875	PF02261	Aspartate decarboxylase
LI89_03880	PF02569	Pantoate-beta-alanine ligase
LI89_03885	PF02548	Ketopantoate hydroxymethyltransferase
LI89_03890	PF01288	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
LI89_03895	PF01743	Poly A polymerase head domain
LI89_03895	PF12626	Polymerase A arginine-rich C-terminus
LI89_03895	PF12627	Probable RNA and SrmB- binding site of polymerase A
LI89_03900	PF00749	tRNA synthetases class I (E and Q), catalytic domain
LI89_03905	PF01258	Prokaryotic dksA/traR C4-type zinc finger
LI89_03910	PF03749	Sugar fermentation stimulation protein
LI89_03915	PF02834	LigT like Phosphoesterase
LI89_03920	PF00270	DEAD/DEAH box helicase
LI89_03920	PF00271	Helicase conserved C-terminal domain
LI89_03920	PF04408	Helicase associated domain (HA2)
LI89_03920	PF08482	LI89_03920
LI89_03925	PF00905	Penicillin binding protein transpeptidase domain
LI89_03925	PF00912	Transglycosylase
LI89_03925	PF14812	LI89_03925
LI89_03925	PF14814	Bifunctional transglycosylase second domain
LI89_03930	PF00005	ABC transporter
LI89_03935	PF01497	Periplasmic binding protein
LI89_03940	PF01032	FecCD transport family
LI89_03945	PF00202	Aminotransferase class-III
LI89_03950	PF00654	Voltage gated chloride channel
LI89_03955	PF01521	Iron-sulphur cluster biosynthesis
LI89_03960	PF03458	LI89_03960
LI89_03965	PF01497	Periplasmic binding protein
LI89_03970	PF01048	Phosphorylase superfamily
LI89_03975	PF01966	HD domain
LI89_03975	PF13286	Phosphohydrolase-associated domain
LI89_03980	PF00595	PDZ domain (Also known as DHR or GLGF)
LI89_03980	PF13180	PDZ domain
LI89_03980	PF13365	Trypsin-like peptidase domain
LI89_03985	PF00072	Response regulator receiver domain
LI89_03985	PF00512	His Kinase A (phospho-acceptor) domain
LI89_03985	PF01627	Hpt domain
LI89_03985	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
LI89_03985	PF09984	LI89_03985
LI89_03990	PF01938	TRAM domain
LI89_03990	PF05958	tRNA (Uracil-5-)-methyltransferase
LI89_03995	PF02824	TGS domain
LI89_03995	PF04607	Region found in RelA / SpoT proteins
LI89_03995	PF13291	ACT domain
LI89_03995	PF13328	HD domain
LI89_04000	PF03819	MazG nucleotide pyrophosphohydrolase domain
LI89_04005	PF00117	Glutamine amidotransferase class-I
LI89_04005	PF06418	CTP synthase N-terminus
LI89_04010	PF00113	Enolase, C-terminal TIM barrel domain
LI89_04010	PF03952	Enolase, N-terminal domain
LI89_04015	PF07992	Pyridine nucleotide-disulphide oxidoreductase
LI89_04025	PF01053	Cys/Met metabolism PLP-dependent enzyme
LI89_04035	PF00080	Copper/zinc superoxide dismutase (SODC)
LI89_04040	PF04055	Radical SAM superfamily
LI89_04040	PF13394	4Fe-4S single cluster domain
LI89_04045	PF01242	6-pyruvoyl tetrahydropterin synthase
LI89_04050	PF00175	Oxidoreductase NAD-binding domain
LI89_04050	PF00258	Flavodoxin
LI89_04050	PF00667	FAD binding domain
LI89_04055	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
LI89_04055	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
LI89_04060	PF01507	Phosphoadenosine phosphosulfate reductase family
LI89_04065	PF15919	LI89_04065
LI89_04070	PF07927	YcfA-like protein
LI89_04075	PF04389	Peptidase family M28
LI89_04080	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
LI89_04080	PF10414	Sirohaem synthase dimerisation region
LI89_04080	PF13241	Putative NAD(P)-binding
LI89_04080	PF14824	Sirohaem biosynthesis protein central
LI89_04085	PF01507	Phosphoadenosine phosphosulfate reductase family
LI89_04090	PF00009	Elongation factor Tu GTP binding domain
LI89_04095	PF01583	Adenylylsulphate kinase
LI89_04100	PF12084	LI89_04100
LI89_04105	PF00005	ABC transporter
LI89_04110	PF00528	Binding-protein-dependent transport system inner membrane component
LI89_04115	PF00497	Bacterial extracellular solute-binding proteins, family 3
LI89_04120	PF04977	Septum formation initiator
LI89_04125	PF01128	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
LI89_04130	PF02542	YgbB family
LI89_04135	PF01142	tRNA pseudouridine synthase D (TruD)
LI89_04140	PF01975	Survival protein SurE
LI89_04145	PF01135	Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
LI89_04150	PF01476	LysM domain
LI89_04150	PF01551	Peptidase family M23
LI89_04155	PF00140	Sigma-70 factor, region 1
LI89_04155	PF04539	Sigma-70 region 3
LI89_04155	PF04542	Sigma-70 region 2
LI89_04155	PF04545	Sigma-70, region 4
LI89_04160	PF00488	MutS domain V
LI89_04160	PF01624	MutS domain I
LI89_04160	PF05188	MutS domain II
LI89_04160	PF05190	MutS family domain IV
LI89_04160	PF05192	MutS domain III
LI89_04165	PF04932	LI89_04165
LI89_04165	PF11846	LI89_04165
LI89_04165	PF15864	LI89_04165
LI89_04170	PF04703	FaeA-like protein
LI89_04175	PF00419	Fimbrial protein
LI89_04185	PF00577	Outer membrane usher protein
LI89_04185	PF13953	PapC C-terminal domain
LI89_04185	PF13954	PapC N-terminal domain
LI89_04190	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
LI89_04190	PF02753	Pili assembly chaperone PapD, C-terminal domain
LI89_04195	PF00419	Fimbrial protein
LI89_04200	PF00419	Fimbrial protein
LI89_04205	PF00419	Fimbrial protein
LI89_04215	PF15959	LI89_04215
LI89_04220	PF01323	DSBA-like thioredoxin domain
LI89_04230	PF00005	ABC transporter
LI89_04230	PF00664	ABC transporter transmembrane region
LI89_04230	PF03412	Peptidase C39 family
LI89_04235	PF16576	LI89_04235
LI89_04240	PF00005	ABC transporter
LI89_04240	PF02687	LI89_04240
LI89_04240	PF12704	MacB-like periplasmic core domain
LI89_04245	PF02321	Outer membrane efflux protein
LI89_04250	PF00109	Beta-ketoacyl synthase, N-terminal domain
LI89_04250	PF02801	Beta-ketoacyl synthase, C-terminal domain
LI89_04255	PF01575	MaoC like domain
LI89_04260	PF00550	Phosphopantetheine attachment site
LI89_04265	PF13561	Enoyl-(Acyl carrier protein) reductase
LI89_04270	PF03212	Pertactin
LI89_04270	PF03797	Autotransporter beta-domain
LI89_04285	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
LI89_04285	PF03466	LysR substrate binding domain
LI89_04295	PF02447	LI89_04295
LI89_04300	PF00291	Pyridoxal-phosphate dependent enzyme
LI89_04305	PF00497	Bacterial extracellular solute-binding proteins, family 3
LI89_04310	PF00528	Binding-protein-dependent transport system inner membrane component
LI89_04315	PF00528	Binding-protein-dependent transport system inner membrane component
LI89_04320	PF00005	ABC transporter
LI89_04325	PF01546	Peptidase family M20/M25/M40
LI89_04325	PF07687	Peptidase dimerisation domain
LI89_04330	PF09347	Domain of unknown function (DUF1989)
LI89_04335	PF07883	Cupin domain
LI89_04335	PF13560	Helix-turn-helix domain
LI89_04345	PF00009	Elongation factor Tu GTP binding domain
LI89_04345	PF00679	Elongation factor G C-terminus
LI89_04345	PF03144	Elongation factor Tu domain 2
LI89_04345	PF03764	Elongation factor G, domain IV
LI89_04345	PF14492	Elongation Factor G, domain II
LI89_04350	PF12840	Helix-turn-helix domain
LI89_04355	PF00107	Zinc-binding dehydrogenase
LI89_04355	PF08240	Alcohol dehydrogenase GroES-like domain
LI89_04360	PF03613	LI89_04360
LI89_04365	PF03609	LI89_04365
LI89_04370	PF03830	PTS system sorbose subfamily IIB component
LI89_04375	PF03610	PTS system fructose IIA component
LI89_04380	PF04198	Putative sugar-binding domain
LI89_04380	PF13545	Crp-like helix-turn-helix domain
LI89_04385	PF00795	Carbon-nitrogen hydrolase
LI89_04390	PF03861	ANTAR domain
LI89_04395	PF13433	Periplasmic binding protein domain
LI89_04400	PF03069	Acetamidase/Formamidase family
LI89_04405	PF00005	ABC transporter
LI89_04410	PF00005	ABC transporter
LI89_04415	PF02653	LI89_04415
LI89_04420	PF02653	LI89_04420
LI89_04425	PF13433	Periplasmic binding protein domain
LI89_04430	PF05681	LI89_04430
LI89_04430	PF05683	Fumarase C-terminus
LI89_04435	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
LI89_04435	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
LI89_04440	PF01261	Xylose isomerase-like TIM barrel
LI89_04445	PF02653	LI89_04445
LI89_04450	PF02653	LI89_04450
LI89_04455	PF00005	ABC transporter
LI89_04460	PF13407	Periplasmic binding protein domain
LI89_04465	PF00455	LI89_04465
LI89_04465	PF08220	DeoR-like helix-turn-helix domain
LI89_04470	PF00596	Class II Aldolase and Adducin N-terminal domain
LI89_04475	PF00455	LI89_04475
LI89_04475	PF08220	DeoR-like helix-turn-helix domain
LI89_04480	PF05025	RbsD / FucU transport protein family
LI89_04485	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
LI89_04485	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
LI89_04490	PF02952	L-fucose isomerase, C-terminal domain
LI89_04490	PF07881	L-fucose isomerase, first N-terminal domain
LI89_04490	PF07882	L-fucose isomerase, second N-terminal domain
LI89_04495	PF07690	Major Facilitator Superfamily
LI89_04500	PF00596	Class II Aldolase and Adducin N-terminal domain
LI89_04505	PF00465	Iron-containing alcohol dehydrogenase
LI89_04510	PF00384	Molybdopterin oxidoreductase
LI89_04510	PF01568	Molydopterin dinucleotide binding domain
LI89_04510	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
LI89_04515	PF12800	4Fe-4S binding domain
LI89_04515	PF13247	4Fe-4S dicluster domain
LI89_04520	PF04976	LI89_04520
LI89_04525	PF02613	Nitrate reductase delta subunit
LI89_04530	PF13744	Helix-turn-helix domain
LI89_04535	PF05973	LI89_04535
LI89_04540	PF13407	Periplasmic binding protein domain
LI89_04545	PF10054	Predicted periplasmic lipoprotein (DUF2291)
LI89_04550	PF00005	ABC transporter
LI89_04555	PF02653	LI89_04555
LI89_04560	PF00456	Transketolase, thiamine diphosphate binding domain
LI89_04565	PF02779	Transketolase, pyrimidine binding domain
LI89_04565	PF02780	Transketolase, C-terminal domain
LI89_04570	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
LI89_04570	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
LI89_04575	PF02952	L-fucose isomerase, C-terminal domain
LI89_04580	PF01047	MarR family
LI89_04580	PF04198	Putative sugar-binding domain
LI89_04585	PF07690	Major Facilitator Superfamily
LI89_04590	PF02464	Competence-damaged protein
LI89_04595	PF00154	recA bacterial DNA recombination protein
LI89_04600	PF02631	RecX family
LI89_04605	PF01411	tRNA synthetases class II (A)
LI89_04605	PF02272	DHHA1 domain
LI89_04605	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
LI89_04610	PF02599	Global regulator protein family
LI89_04635	PF13419	Haloacid dehalogenase-like hydrolase
LI89_04645	PF04262	Glutamate-cysteine ligase
LI89_04650	PF02664	S-Ribosylhomocysteinase (LuxS)
LI89_04655	PF01595	LI89_04655
LI89_04655	PF03471	Transporter associated domain
LI89_04660	PF01578	LI89_04660
LI89_04665	PF00448	SRP54-type protein, GTPase domain
LI89_04665	PF02881	SRP54-type protein, helical bundle domain
LI89_04665	PF02978	Signal peptide binding domain
LI89_04670	PF00886	Ribosomal protein S16
LI89_04675	PF01782	RimM N-terminal domain
LI89_04675	PF05239	PRC-barrel domain
LI89_04680	PF01746	tRNA (Guanine-1)-methyltransferase
LI89_04685	PF01245	Ribosomal protein L19
LI89_04690	PF04338	Protein of unknown function, DUF481
LI89_04695	PF03605	LI89_04695
LI89_04700	PF00072	Response regulator receiver domain
LI89_04700	PF04397	LytTr DNA-binding domain
LI89_04705	PF00793	DAHP synthetase I family
LI89_04710	PF01817	Chorismate mutase type II
LI89_04710	PF02153	Prephenate dehydrogenase
LI89_04715	PF00800	Prephenate dehydratase
LI89_04715	PF01817	Chorismate mutase type II
LI89_04720	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
LI89_04725	PF13525	Outer membrane lipoprotein
LI89_04730	PF00849	RNA pseudouridylate synthase
LI89_04730	PF01479	S4 domain
LI89_04735	PF02578	Multi-copper polyphenol oxidoreductase laccase
LI89_04740	PF00004	ATPase family associated with various cellular activities (AAA)
LI89_04740	PF02861	Clp amino terminal domain
LI89_04740	PF07724	AAA domain (Cdc48 subfamily)
LI89_04740	PF10431	C-terminal, D2-small domain, of ClpB protein
LI89_04785	PF10043	LI89_04785
LI89_04790	PF13091	PLD-like domain
LI89_04795	PF00583	Acetyltransferase (GNAT) family
LI89_04795	PF13380	CoA binding domain
LI89_04795	PF13549	ATP-grasp domain
LI89_04795	PF13607	Succinyl-CoA ligase like flavodoxin domain
LI89_04800	PF03942	LI89_04800
LI89_04805	PF00085	Thioredoxin
LI89_04810	PF00588	SpoU rRNA Methylase family
LI89_04810	PF08032	RNA 2'-O ribose methyltransferase substrate binding
LI89_04815	PF07690	Major Facilitator Superfamily
LI89_04820	PF00529	HlyD family secretion protein
LI89_04820	PF16576	LI89_04820
LI89_04825	PF02321	Outer membrane efflux protein
LI89_04830	PF01047	MarR family
LI89_04835	PF05437	LI89_04835
LI89_04840	PF03591	LI89_04840
LI89_04845	PF07690	Major Facilitator Superfamily
LI89_04850	PF11533	Protein of unknown function (DUF3225)
LI89_04855	PF01425	Amidase
LI89_04860	PF13318	LI89_04860
LI89_04865	PF01019	Gamma-glutamyltranspeptidase
LI89_04870	PF01380	SIS domain
LI89_04870	PF01418	Helix-turn-helix domain, rpiR family
LI89_04875	PF00497	Bacterial extracellular solute-binding proteins, family 3
LI89_04880	PF00528	Binding-protein-dependent transport system inner membrane component
LI89_04885	PF00528	Binding-protein-dependent transport system inner membrane component
LI89_04890	PF00005	ABC transporter
LI89_04895	PF00266	Aminotransferase class-V
LI89_04900	PF01546	Peptidase family M20/M25/M40
LI89_04905	PF00795	Carbon-nitrogen hydrolase
LI89_04910	PF00155	Aminotransferase class I and II
LI89_04915	PF00596	Class II Aldolase and Adducin N-terminal domain
LI89_04925	PF03079	ARD/ARD' family
LI89_04930	PF01008	Initiation factor 2 subunit family
LI89_04935	PF01636	Phosphotransferase enzyme family
LI89_04940	PF03865	Haemolysin secretion/activation protein ShlB/FhaC/HecB
LI89_04940	PF08479	POTRA domain, ShlB-type
LI89_04955	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
LI89_04955	PF02770	Acyl-CoA dehydrogenase, middle domain
LI89_04955	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
LI89_04955	PF09317	LI89_04955
LI89_04960	PF13580	SIS domain
LI89_04965	PF13230	Glutamine amidotransferases class-II
LI89_04970	PF03734	L,D-transpeptidase catalytic domain
LI89_04975	PF05896	LI89_04975
LI89_04975	PF11973	LI89_04975
LI89_04980	PF03116	LI89_04980
LI89_04985	PF04205	FMN-binding domain
LI89_04990	PF02508	LI89_04990
LI89_04995	PF02508	LI89_04995
LI89_05000	PF00111	2Fe-2S iron-sulfur cluster binding domain
LI89_05000	PF00175	Oxidoreductase NAD-binding domain
LI89_05000	PF00970	Oxidoreductase FAD-binding domain
LI89_05005	PF02424	ApbE family
LI89_05010	PF04400	LI89_05010
LI89_05015	PF03009	Glycerophosphoryl diester phosphodiesterase family
LI89_05020	PF01820	D-ala D-ala ligase N-terminus
LI89_05020	PF07478	D-ala D-ala ligase C-terminus
LI89_05025	PF08348	LI89_05025
LI89_05025	PF13309	LI89_05025
LI89_05030	PF00291	Pyridoxal-phosphate dependent enzyme
LI89_05035	PF01042	Endoribonuclease L-PSP
LI89_05040	PF00817	impB/mucB/samB family
LI89_05040	PF11798	IMS family HHH motif
LI89_05040	PF11799	impB/mucB/samB family C-terminal domain
LI89_05045	PF01546	Peptidase family M20/M25/M40
LI89_05045	PF07687	Peptidase dimerisation domain
LI89_05050	PF00156	Phosphoribosyl transferase domain
LI89_05055	PF06500	Alpha/beta hydrolase of unknown function (DUF1100)
LI89_05060	PF07417	Transcriptional regulator Crl
LI89_05065	PF00696	Amino acid kinase family
LI89_05065	PF01472	PUA domain
LI89_05070	PF00171	Aldehyde dehydrogenase family
LI89_05075	PF00392	Bacterial regulatory proteins, gntR family
LI89_05075	PF07702	UTRA domain
LI89_05080	PF00367	phosphotransferase system, EIIB
LI89_05080	PF02378	Phosphotransferase system, EIIC
LI89_05085	PF02056	Family 4 glycosyl hydrolase
LI89_05085	PF11975	Family 4 glycosyl hydrolase C-terminal domain
LI89_05090	PF07238	PilZ domain
LI89_05090	PF07317	Flagellar regulator YcgR
LI89_05095	PF06165	Glycosyltransferase family 36
LI89_05095	PF10091	Putative glucoamylase
LI89_05095	PF17167	LI89_05095
LI89_05105	PF00583	Acetyltransferase (GNAT) family
LI89_05110	PF08241	Methyltransferase domain
LI89_05115	PF07338	Protein of unknown function (DUF1471)
LI89_05125	PF01497	Periplasmic binding protein
LI89_05130	PF00593	TonB dependent receptor
LI89_05130	PF07715	TonB-dependent Receptor Plug Domain
LI89_05135	PF01202	Shikimate kinase
LI89_05140	PF06865	Protein of unknown function (DUF1255)
LI89_05145	PF04381	Putative exonuclease, RdgC
LI89_05150	PF00480	ROK family
LI89_05155	PF13476	AAA domain
LI89_05155	PF13558	Putative exonuclease SbcCD, C subunit
LI89_05160	PF00149	Calcineurin-like phosphoesterase
LI89_05160	PF12320	Type 5 capsule protein repressor C-terminal domain
LI89_05165	PF00072	Response regulator receiver domain
LI89_05165	PF00486	Transcriptional regulatory protein, C terminal
LI89_05170	PF00512	His Kinase A (phospho-acceptor) domain
LI89_05170	PF00989	PAS fold
LI89_05170	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
LI89_05170	PF11808	LI89_05170
LI89_05175	PF12849	PBP superfamily domain
LI89_05180	PF05525	LI89_05180
LI89_05185	PF00324	Amino acid permease
LI89_05190	PF00128	Alpha amylase, catalytic domain
LI89_05190	PF02903	Alpha amylase, N-terminal ig-like domain
LI89_05195	PF00106	short chain dehydrogenase
LI89_05200	PF01019	Gamma-glutamyltranspeptidase
LI89_05205	PF00578	AhpC/TSA family
LI89_05205	PF10417	C-terminal domain of 1-Cys peroxiredoxin
LI89_05210	PF04336	LI89_05210
LI89_05215	PF02547	Queuosine biosynthesis protein
LI89_05220	PF12697	Alpha/beta hydrolase family
LI89_05225	PF01702	Queuine tRNA-ribosyltransferase
LI89_05230	PF02699	Preprotein translocase subunit
LI89_05235	PF02355	Protein export membrane protein
LI89_05235	PF07549	SecD/SecF GG Motif
LI89_05235	PF13721	SecD export protein N-terminal TM region
LI89_05240	PF02355	Protein export membrane protein
LI89_05240	PF07549	SecD/SecF GG Motif
LI89_05250	PF03477	ATP cone domain
LI89_05255	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
LI89_05255	PF01872	RibD C-terminal domain
LI89_05260	PF00885	6,7-dimethyl-8-ribityllumazine synthase
LI89_05265	PF01029	NusB family
LI89_05270	PF00586	AIR synthase related protein, N-terminal domain
LI89_05270	PF02769	AIR synthase related protein, C-terminal domain
LI89_05275	PF04608	Phosphatidylglycerophosphatase A
LI89_05280	PF02779	Transketolase, pyrimidine binding domain
LI89_05280	PF02780	Transketolase, C-terminal domain
LI89_05280	PF13292	1-deoxy-D-xylulose-5-phosphate synthase
LI89_05285	PF00348	Polyprenyl synthetase
LI89_05290	PF02609	Exonuclease VII small subunit
LI89_05295	PF02568	Thiamine biosynthesis protein (ThiI)
LI89_05295	PF02926	THUMP domain
LI89_05300	PF01965	DJ-1/PfpI family
LI89_05305	PF02558	Ketopantoate reductase PanE/ApbA
LI89_05305	PF08546	Ketopantoate reductase PanE/ApbA C terminal
LI89_05310	PF04461	Protein of unknown function (DUF520)
LI89_05315	PF07690	Major Facilitator Superfamily
LI89_05320	PF01040	UbiA prenyltransferase family
LI89_05325	PF03626	LI89_05325
LI89_05330	PF00510	Cytochrome c oxidase subunit III
LI89_05335	PF00115	Cytochrome C and Quinol oxidase polypeptide I
LI89_05340	PF00116	Cytochrome C oxidase subunit II, periplasmic domain
LI89_05340	PF06481	COX Aromatic Rich Motif
LI89_05350	PF03502	Nucleoside-specific channel-forming protein, Tsx
LI89_05355	PF07690	Major Facilitator Superfamily
LI89_05360	PF03923	LI89_05360
LI89_05360	PF08139	LI89_05360
LI89_05365	PF01722	BolA-like protein
LI89_05370	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
LI89_05370	PF05697	Bacterial trigger factor protein (TF)
LI89_05370	PF05698	Bacterial trigger factor protein (TF) C-terminus
LI89_05375	PF00574	Clp protease
LI89_05380	PF06689	ClpX C4-type zinc finger
LI89_05380	PF07724	AAA domain (Cdc48 subfamily)
LI89_05380	PF10431	C-terminal, D2-small domain, of ClpB protein
LI89_05385	PF00004	ATPase family associated with various cellular activities (AAA)
LI89_05385	PF02190	ATP-dependent protease La (LON) domain
LI89_05385	PF05362	Lon protease (S16) C-terminal proteolytic domain
LI89_05390	PF00216	Bacterial DNA-binding protein
LI89_05400	PF13145	PPIC-type PPIASE domain
LI89_05400	PF13624	SurA N-terminal domain
LI89_05405	PF12836	Helix-hairpin-helix motif
LI89_05410	PF13279	Thioesterase-like superfamily
LI89_05415	PF06508	Queuosine biosynthesis protein QueC
LI89_05420	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
LI89_05420	PF12793	LI89_05420
LI89_05425	PF08282	haloacid dehalogenase-like hydrolase
LI89_05430	PF00291	Pyridoxal-phosphate dependent enzyme
LI89_05435	PF01037	AsnC family
LI89_05435	PF13412	Winged helix-turn-helix DNA-binding
LI89_05440	PF00005	ABC transporter
LI89_05440	PF00664	ABC transporter transmembrane region
LI89_05445	PF00005	ABC transporter
LI89_05445	PF00664	ABC transporter transmembrane region
LI89_05450	PF00543	Nitrogen regulatory protein P-II
LI89_05455	PF00909	Ammonium Transporter Family
LI89_05460	PF13622	Thioesterase-like superfamily
LI89_05470	PF09619	Type III secretion system lipoprotein chaperone (YscW)
LI89_05475	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
LI89_05480	PF05321	Haemolysin expression modulating protein
LI89_05485	PF10757	LI89_05485
LI89_05500	PF00005	ABC transporter
LI89_05505	PF00950	LI89_05505
LI89_05510	PF01297	Periplasmic solute binding protein family
LI89_05515	PF00444	Ribosomal protein L36
LI89_05520	PF01197	Ribosomal protein L31
LI89_05525	PF10797	LI89_05525
LI89_05530	PF10941	LI89_05530
LI89_05535	PF01676	Metalloenzyme superfamily
LI89_05540	PF01168	Alanine racemase, N-terminal domain
LI89_05545	PF00874	PRD domain
LI89_05550	PF00873	AcrB/AcrD/AcrF family
LI89_05555	PF00529	HlyD family secretion protein
LI89_05555	PF16576	LI89_05555
LI89_05560	PF00440	Bacterial regulatory proteins, tetR family
LI89_05560	PF08361	MAATS-type transcriptional repressor, C-terminal region
LI89_05565	PF02635	DsrE/DsrF-like family
LI89_05570	PF00924	Mechanosensitive ion channel
LI89_05570	PF12794	LI89_05570
LI89_05570	PF12795	LI89_05570
LI89_05575	PF10689	LI89_05575
LI89_05580	PF07445	Primosomal replication protein priB and priC
LI89_05585	PF04304	LI89_05585
LI89_05590	PF00156	Phosphoribosyl transferase domain
LI89_05595	PF12168	LI89_05595
LI89_05595	PF12169	DNA polymerase III subunits gamma and tau domain III
LI89_05595	PF12170	DNA polymerase III tau subunit V interacting with alpha
LI89_05595	PF13177	DNA polymerase III, delta subunit
LI89_05600	PF02575	YbaB/EbfC DNA-binding family
LI89_05605	PF02132	RecR protein
LI89_05605	PF13662	Toprim domain
LI89_05610	PF00183	Hsp90 protein
LI89_05610	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
LI89_05615	PF00406	Adenylate kinase
LI89_05615	PF05191	Adenylate kinase, active site lid
LI89_05620	PF00762	Ferrochelatase
LI89_05625	PF01943	LI89_05625
LI89_05630	PF00535	Glycosyl transferase family 2
LI89_05635	PF00535	Glycosyl transferase family 2
LI89_05640	PF00534	Glycosyl transferases group 1
LI89_05640	PF13439	Glycosyltransferase Family 4
LI89_05645	PF00534	Glycosyl transferases group 1
LI89_05645	PF13439	Glycosyltransferase Family 4
LI89_05650	PF00953	Glycosyl transferase family 4
LI89_05655	PF02719	Polysaccharide biosynthesis protein
LI89_05660	PF00534	Glycosyl transferases group 1
LI89_05660	PF13439	Glycosyltransferase Family 4
LI89_05665	PF01370	NAD dependent epimerase/dehydratase family
LI89_05670	PF00294	pfkB family carbohydrate kinase
LI89_05675	PF00999	Sodium/hydrogen exchanger family
LI89_05675	PF02254	TrkA-N domain
LI89_05680	PF07690	Major Facilitator Superfamily
LI89_05685	PF00149	Calcineurin-like phosphoesterase
LI89_05685	PF02872	5'-nucleotidase, C-terminal domain
LI89_05690	PF04073	Aminoacyl-tRNA editing domain
LI89_05695	PF01963	LI89_05695
LI89_05700	PF00122	E1-E2 ATPase
LI89_05700	PF00403	Heavy-metal-associated domain
LI89_05700	PF00702	haloacid dehalogenase-like hydrolase
LI89_05705	PF13411	MerR HTH family regulatory protein
LI89_05710	PF01957	NfeD-like C-terminal, partner-binding
LI89_05715	PF01145	SPFH domain / Band 7 family
LI89_05720	PF00085	Thioredoxin
LI89_05720	PF14559	Tetratricopeptide repeat
LI89_05720	PF14561	Tetratricopeptide repeat
LI89_05725	PF00106	short chain dehydrogenase
LI89_05730	PF13472	GDSL-like Lipase/Acylhydrolase family
LI89_05735	PF00005	ABC transporter
LI89_05740	PF02687	LI89_05740
LI89_05745	PF02222	ATP-grasp domain
LI89_05750	PF00731	AIR carboxylase
LI89_05755	PF00149	Calcineurin-like phosphoesterase
LI89_05760	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
LI89_05765	PF01406	tRNA synthetases class I (C) catalytic domain
LI89_05765	PF09190	DALR domain
LI89_05770	PF13275	S4 domain
LI89_05775	PF00763	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
LI89_05775	PF02882	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
LI89_05795	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
LI89_05800	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
LI89_05800	PF03466	LysR substrate binding domain
LI89_05805	PF07110	EthD domain
LI89_05810	PF00248	Aldo/keto reductase family
LI89_05815	PF12697	Alpha/beta hydrolase family
LI89_05820	PF02627	Carboxymuconolactone decarboxylase family
LI89_05825	PF07883	Cupin domain
LI89_05830	PF00512	His Kinase A (phospho-acceptor) domain
LI89_05830	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
LI89_05835	PF00072	Response regulator receiver domain
LI89_05835	PF00486	Transcriptional regulatory protein, C terminal
LI89_05840	PF01738	Dienelactone hydrolase family
LI89_05845	PF13091	PLD-like domain
LI89_05855	PF08007	Cupin superfamily protein
LI89_05860	PF00221	Aromatic amino acid lyase
LI89_05865	PF01977	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
LI89_05875	PF00005	ABC transporter
LI89_05875	PF00664	ABC transporter transmembrane region
LI89_05880	PF03992	Antibiotic biosynthesis monooxygenase
LI89_05885	PF08971	Glycogen synthesis protein
LI89_05890	PF00149	Calcineurin-like phosphoesterase
LI89_05900	PF00196	Bacterial regulatory proteins, luxR family
LI89_05905	PF00313	'Cold-shock' DNA-binding domain
LI89_05910	PF00313	'Cold-shock' DNA-binding domain
LI89_05915	PF02537	LI89_05915
LI89_05920	PF00990	GGDEF domain
LI89_05920	PF05230	LI89_05920
LI89_05925	PF02416	mttA/Hcf106 family
LI89_05930	PF04055	Radical SAM superfamily
LI89_05930	PF16881	LI89_05930
LI89_05935	PF03099	Biotin/lipoate A/B protein ligase family
LI89_05940	PF04359	Protein of unknown function (DUF493)
LI89_05945	PF00768	D-alanyl-D-alanine carboxypeptidase
LI89_05945	PF07943	Penicillin-binding protein 5, C-terminal domain
LI89_05950	PF03330	Rare lipoprotein A (RlpA)-like double-psi beta-barrel
LI89_05950	PF05036	Sporulation related domain
LI89_05955	PF01098	LI89_05955
LI89_05960	PF00905	Penicillin binding protein transpeptidase domain
LI89_05960	PF03717	Penicillin-binding Protein dimerisation domain
LI89_05965	PF02590	Predicted SPOUT methyltransferase
LI89_05970	PF02410	Oligomerisation domain
LI89_05975	PF01467	Cytidylyltransferase
LI89_05980	PF06144	DNA polymerase III, delta subunit
LI89_05980	PF14840	Processivity clamp loader gamma complex DNA pol III C-term
LI89_05985	PF04390	Lipopolysaccharide-assembly
LI89_05990	PF00133	tRNA synthetases class I (I, L, M and V)
LI89_05990	PF08264	Anticodon-binding domain of tRNA
LI89_05990	PF13603	Leucyl-tRNA synthetase, Domain 2
LI89_05995	PF07295	LI89_05995
LI89_06000	PF13583	Metallo-peptidase family M12B Reprolysin-like
LI89_06005	PF00005	ABC transporter
LI89_06010	PF00528	Binding-protein-dependent transport system inner membrane component
LI89_06015	PF00528	Binding-protein-dependent transport system inner membrane component
LI89_06020	PF00497	Bacterial extracellular solute-binding proteins, family 3
LI89_06025	PF01243	Pyridoxamine 5'-phosphate oxidase
LI89_06030	PF00795	Carbon-nitrogen hydrolase
LI89_06035	PF00571	CBS domain
LI89_06035	PF03471	Transporter associated domain
LI89_06040	PF02130	Uncharacterized protein family UPF0054
LI89_06045	PF02562	PhoH-like protein
LI89_06050	PF00919	Uncharacterized protein family UPF0004
LI89_06050	PF01938	TRAM domain
LI89_06050	PF04055	Radical SAM superfamily
LI89_06055	PF01494	FAD binding domain
LI89_06090	PF00733	Asparagine synthase
LI89_06090	PF13537	Glutamine amidotransferase domain
LI89_06095	PF13242	HAD-hyrolase-like
LI89_06095	PF13344	Haloacid dehalogenase-like hydrolase
LI89_06100	PF00480	ROK family
LI89_06100	PF01047	MarR family
LI89_06105	PF01979	Amidohydrolase family
LI89_06110	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
LI89_06115	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
LI89_06115	PF00367	phosphotransferase system, EIIB
LI89_06115	PF02378	Phosphotransferase system, EIIC
LI89_06120	PF00749	tRNA synthetases class I (E and Q), catalytic domain
LI89_06120	PF03950	tRNA synthetases class I (E and Q), anti-codon binding domain
LI89_06125	PF03573	outer membrane porin, OprD family
LI89_06130	PF13982	LI89_06130
LI89_06135	PF00728	Glycosyl hydrolase family 20, catalytic domain
LI89_06135	PF02838	Glycosyl hydrolase family 20, domain 2
LI89_06135	PF03173	Putative carbohydrate binding domain
LI89_06135	PF03174	Chitobiase/beta-hexosaminidase C-terminal domain
LI89_06140	PF01475	Ferric uptake regulator family
LI89_06145	PF00258	Flavodoxin
LI89_06150	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
LI89_06150	PF02203	Tar ligand binding domain homologue
LI89_06155	PF01402	Ribbon-helix-helix protein, copG family
LI89_06160	PF12697	Alpha/beta hydrolase family
LI89_06165	PF03925	SeqA protein
LI89_06165	PF17206	LI89_06165
LI89_06170	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
LI89_06170	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
LI89_06170	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
LI89_06170	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
LI89_06180	PF00892	EamA-like transporter family
LI89_06185	PF00072	Response regulator receiver domain
LI89_06185	PF00486	Transcriptional regulatory protein, C terminal
LI89_06190	PF00512	His Kinase A (phospho-acceptor) domain
LI89_06190	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
LI89_06190	PF02702	Osmosensitive K+ channel His kinase sensor domain
LI89_06190	PF13492	GAF domain
LI89_06190	PF13493	Domain of unknown function (DUF4118)
LI89_06195	PF02669	LI89_06195
LI89_06200	PF00122	E1-E2 ATPase
LI89_06200	PF00702	haloacid dehalogenase-like hydrolase
LI89_06205	PF03814	LI89_06205
LI89_06210	PF09604	LI89_06210
LI89_06215	PF10725	LI89_06215
LI89_06225	PF02794	LI89_06225
LI89_06230	PF03543	Yersinia/Haemophilus virulence surface antigen
LI89_06230	PF07634	LI89_06230
LI89_06230	PF11713	Peptidase C80 family
LI89_06235	PF08349	LI89_06235
LI89_06240	PF00875	DNA photolyase
LI89_06240	PF03441	FAD binding domain of DNA photolyase
LI89_06245	PF02112	LI89_06245
LI89_06250	PF01784	NIF3 (NGG1p interacting factor 3)
LI89_06260	PF02682	Allophanate hydrolase subunit 1
LI89_06265	PF02626	Allophanate hydrolase subunit 2
LI89_06270	PF03746	LamB/YcsF family
LI89_06275	PF06149	LI89_06275
LI89_06280	PF06166	LI89_06280
LI89_06285	PF01470	Pyroglutamyl peptidase
LI89_06290	PF00285	Citrate synthase
LI89_06295	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
LI89_06305	PF00890	FAD binding domain
LI89_06305	PF02910	Fumarate reductase flavoprotein C-term
LI89_06310	PF13085	2Fe-2S iron-sulfur cluster binding domain
LI89_06310	PF13534	4Fe-4S dicluster domain
LI89_06315	PF00676	Dehydrogenase E1 component
LI89_06315	PF02779	Transketolase, pyrimidine binding domain
LI89_06315	PF16078	LI89_06315
LI89_06315	PF16870	LI89_06315
LI89_06320	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
LI89_06320	PF00364	Biotin-requiring enzyme
LI89_06320	PF02817	e3 binding domain
LI89_06325	PF00549	CoA-ligase
LI89_06325	PF08442	ATP-grasp domain
LI89_06330	PF00549	CoA-ligase
LI89_06330	PF02629	CoA binding domain
LI89_06335	PF00149	Calcineurin-like phosphoesterase
LI89_06335	PF02872	5'-nucleotidase, C-terminal domain
LI89_06340	PF01654	LI89_06340
LI89_06345	PF02322	LI89_06345
LI89_06350	PF08173	LI89_06350
LI89_06355	PF09600	LI89_06355
LI89_06360	PF03061	Thioesterase superfamily
LI89_06365	PF01618	LI89_06365
LI89_06370	PF02472	Biopolymer transport protein ExbD/TolR
LI89_06375	PF06519	TolA C-terminal
LI89_06380	PF04052	TolB amino-terminal domain
LI89_06380	PF07676	WD40-like Beta Propeller Repeat
LI89_06385	PF00691	OmpA family
LI89_06390	PF13174	Tetratricopeptide repeat
LI89_06390	PF13432	Tetratricopeptide repeat
LI89_06390	PF16331	LI89_06390
LI89_06415	PF02445	Quinolinate synthetase A protein
LI89_06420	PF04973	LI89_06420
LI89_06425	PF01545	Cation efflux family
LI89_06430	PF00793	DAHP synthetase I family
LI89_06435	PF00300	Histidine phosphatase superfamily (branch 1)
LI89_06440	PF01223	DNA/RNA non-specific endonuclease
LI89_06445	PF07769	LI89_06445
LI89_06450	PF01263	Aldose 1-epimerase
LI89_06455	PF00288	GHMP kinases N terminal domain
LI89_06455	PF08544	GHMP kinases C terminal
LI89_06455	PF10509	Galactokinase galactose-binding signature
LI89_06460	PF01087	Galactose-1-phosphate uridyl transferase, N-terminal domain
LI89_06460	PF02744	Galactose-1-phosphate uridyl transferase, C-terminal domain
LI89_06465	PF16363	LI89_06465
LI89_06470	PF02517	CAAX protease self-immunity
LI89_06475	PF00005	ABC transporter
LI89_06480	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
LI89_06480	PF03459	TOBE domain
LI89_06485	PF10766	Protein of unknown function (DUF2592)
LI89_06490	PF13531	Bacterial extracellular solute-binding protein
LI89_06495	PF00528	Binding-protein-dependent transport system inner membrane component
LI89_06500	PF00005	ABC transporter
LI89_06500	PF03459	TOBE domain
LI89_06505	PF08282	haloacid dehalogenase-like hydrolase
LI89_06510	PF10282	Lactonase, 7-bladed beta-propeller
LI89_06515	PF00202	Aminotransferase class-III
LI89_06520	PF04055	Radical SAM superfamily
LI89_06520	PF06968	Biotin and Thiamin Synthesis associated domain
LI89_06525	PF00155	Aminotransferase class I and II
LI89_06530	PF08241	Methyltransferase domain
LI89_06535	PF13500	AAA domain
LI89_06540	PF00005	ABC transporter
LI89_06545	PF00271	Helicase conserved C-terminal domain
LI89_06545	PF02151	UvrB/uvrC motif
LI89_06545	PF04851	Type III restriction enzyme, res subunit
LI89_06545	PF12344	Ultra-violet resistance protein B
LI89_06550	PF09905	Uncharacterized conserved protein (DUF2132)
LI89_06555	PF01933	Uncharacterised protein family UPF0052
LI89_06560	PF04055	Radical SAM superfamily
LI89_06560	PF06463	Molybdenum Cofactor Synthesis C
LI89_06560	PF13353	4Fe-4S single cluster domain
LI89_06565	PF01967	MoaC family
LI89_06570	PF02597	ThiS family
LI89_06575	PF02391	MoaE protein
LI89_06580	PF01027	Inhibitor of apoptosis-promoting Bax1
LI89_06585	PF12698	ABC-2 family transporter protein
LI89_06590	PF12698	ABC-2 family transporter protein
LI89_06595	PF00005	ABC transporter
LI89_06600	PF16576	LI89_06600
LI89_06605	PF00440	Bacterial regulatory proteins, tetR family
LI89_06605	PF09209	Domain of unknown function (DUF1956)
LI89_06610	PF00270	DEAD/DEAH box helicase
LI89_06610	PF00271	Helicase conserved C-terminal domain
LI89_06615	PF01207	Dihydrouridine synthase (Dus)
LI89_06630	PF00768	D-alanyl-D-alanine carboxypeptidase
LI89_06640	PF01565	FAD binding domain
LI89_06640	PF09330	D-lactate dehydrogenase, membrane binding
LI89_06645	PF01928	CYTH domain
LI89_06650	PF01844	HNH endonuclease
LI89_06655	PF05076	Suppressor of fused protein (SUFU)
LI89_06660	PF04226	LI89_06660
LI89_06665	PF00005	ABC transporter
LI89_06670	PF12974	ABC transporter, phosphonate, periplasmic substrate-binding protein
LI89_06675	PF00528	Binding-protein-dependent transport system inner membrane component
LI89_06680	PF00528	Binding-protein-dependent transport system inner membrane component
LI89_06685	PF07308	LI89_06685
LI89_06690	PF13433	Periplasmic binding protein domain
LI89_06695	PF02653	LI89_06695
LI89_06695	PF13646	HEAT repeats
LI89_06700	PF02653	LI89_06700
LI89_06705	PF00005	ABC transporter
LI89_06705	PF12399	Branched-chain amino acid ATP-binding cassette transporter
LI89_06710	PF00005	ABC transporter
LI89_06715	PF00581	Rhodanese-like domain
LI89_06720	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
LI89_06720	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
LI89_06725	PF00487	LI89_06725
LI89_06735	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
LI89_06740	PF00528	Binding-protein-dependent transport system inner membrane component
LI89_06745	PF00005	ABC transporter
LI89_06750	PF00528	Binding-protein-dependent transport system inner membrane component
LI89_06755	PF12974	ABC transporter, phosphonate, periplasmic substrate-binding protein
LI89_06760	PF13561	Enoyl-(Acyl carrier protein) reductase
LI89_06765	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
LI89_06765	PF03466	LysR substrate binding domain
LI89_06775	PF00892	EamA-like transporter family
LI89_06780	PF05426	Alginate lyase
LI89_06785	PF00267	Gram-negative porin
LI89_06790	PF06733	DEAD_2
LI89_06790	PF13307	Helicase C-terminal domain
LI89_06795	PF00230	Major intrinsic protein
LI89_06800	PF02885	Glycosyl transferase family, helical bundle domain
LI89_06805	PF01432	Peptidase family M3
LI89_06810	PF07338	Protein of unknown function (DUF1471)
LI89_06815	PF01613	Flavin reductase like domain
LI89_06820	PF05971	Protein of unknown function (DUF890)
LI89_06825	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
LI89_06825	PF08447	PAS fold
LI89_06825	PF08448	PAS fold
LI89_06830	PF00005	ABC transporter
LI89_06835	PF00528	Binding-protein-dependent transport system inner membrane component
LI89_06840	PF00497	Bacterial extracellular solute-binding proteins, family 3
LI89_06845	PF01258	Prokaryotic dksA/traR C4-type zinc finger
LI89_06850	PF00210	Ferritin-like domain
LI89_06855	PF13847	Methyltransferase domain
LI89_06860	PF10099	LI89_06860
LI89_06865	PF04542	Sigma-70 region 2
LI89_06865	PF08281	Sigma-70, region 4
LI89_06870	PF02469	Fasciclin domain
LI89_06875	PF00583	Acetyltransferase (GNAT) family
LI89_06880	PF00892	EamA-like transporter family
LI89_06890	PF13505	Outer membrane protein beta-barrel domain
LI89_06895	PF12697	Alpha/beta hydrolase family
LI89_06900	PF01545	Cation efflux family
LI89_06905	PF00557	Metallopeptidase family M24
LI89_06905	PF01321	Creatinase/Prolidase N-terminal domain
LI89_06915	PF00005	ABC transporter
LI89_06915	PF12848	ABC transporter
LI89_06920	PF00899	ThiF family
LI89_06925	PF00994	Probable molybdopterin binding domain
LI89_06925	PF03453	MoeA N-terminal region (domain I and II)
LI89_06925	PF03454	MoeA C-terminal region (domain IV)
LI89_06930	PF06041	Bacterial protein of unknown function (DUF924)
LI89_06935	PF04055	Radical SAM superfamily
LI89_06940	PF00005	ABC transporter
LI89_06945	PF13437	HlyD family secretion protein
LI89_06960	PF00756	Putative esterase
LI89_06965	PF00107	Zinc-binding dehydrogenase
LI89_06965	PF08240	Alcohol dehydrogenase GroES-like domain
LI89_06970	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
LI89_06970	PF03466	LysR substrate binding domain
LI89_06975	PF06779	LI89_06975
LI89_06980	PF01227	GTP cyclohydrolase I
LI89_06985	PF04235	LI89_06985
LI89_06990	PF00356	Bacterial regulatory proteins, lacI family
LI89_06990	PF13377	Periplasmic binding protein-like domain
LI89_06995	PF13407	Periplasmic binding protein domain
LI89_07000	PF00005	ABC transporter
LI89_07005	PF02653	LI89_07005
LI89_07010	PF01226	Formate/nitrite transporter
LI89_07020	PF00384	Molybdopterin oxidoreductase
LI89_07020	PF01568	Molydopterin dinucleotide binding domain
LI89_07020	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
LI89_07025	PF12800	4Fe-4S binding domain
LI89_07025	PF13247	4Fe-4S dicluster domain
LI89_07030	PF01750	Hydrogenase maturation protease
LI89_07035	PF07450	LI89_07035
LI89_07040	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
LI89_07045	PF12838	4Fe-4S dicluster domain
LI89_07050	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
LI89_07050	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
LI89_07050	PF00374	Nickel-dependent hydrogenase
LI89_07055	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
LI89_07055	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
LI89_07060	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
LI89_07065	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
LI89_07065	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
LI89_07070	PF00146	NADH dehydrogenase
LI89_07075	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
LI89_07080	PF00037	4Fe-4S binding domain
LI89_07080	PF12798	4Fe-4S binding domain
LI89_07085	PF01155	Hydrogenase expression/synthesis hypA family
LI89_07090	PF01455	HupF/HypC family
LI89_07095	PF02698	DUF218 domain
LI89_07100	PF00390	Malic enzyme, N-terminal domain
LI89_07100	PF03949	Malic enzyme, NAD binding domain
LI89_07110	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
LI89_07110	PF08211	Cytidine and deoxycytidylate deaminase zinc-binding region
LI89_07115	PF04172	LI89_07115
LI89_07120	PF03788	LI89_07120
LI89_07125	PF07690	Major Facilitator Superfamily
LI89_07130	PF08309	LI89_07130
LI89_07135	PF13407	Periplasmic binding protein domain
LI89_07145	PF01588	Putative tRNA binding domain
LI89_07145	PF09334	tRNA synthetases class I (M)
LI89_07150	PF10609	ParA/MinD ATPase like
LI89_07155	PF00485	Phosphoribulokinase / Uridine kinase family
LI89_07160	PF00692	dUTPase
LI89_07165	PF05170	LI89_07165
LI89_07170	PF03606	LI89_07170
LI89_07175	PF00571	CBS domain
LI89_07175	PF03471	Transporter associated domain
LI89_07175	PF03741	LI89_07175
LI89_07180	PF00483	Nucleotidyl transferase
LI89_07185	PF00483	Nucleotidyl transferase
LI89_07190	PF00393	6-phosphogluconate dehydrogenase, C-terminal domain
LI89_07190	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
LI89_07195	PF01502	Phosphoribosyl-AMP cyclohydrolase
LI89_07195	PF01503	Phosphoribosyl-ATP pyrophosphohydrolase
LI89_07200	PF00977	Histidine biosynthesis protein
LI89_07205	PF00977	Histidine biosynthesis protein
LI89_07210	PF00117	Glutamine amidotransferase class-I
LI89_07215	PF00475	Imidazoleglycerol-phosphate dehydratase
LI89_07215	PF13242	HAD-hyrolase-like
LI89_07220	PF00155	Aminotransferase class I and II
LI89_07225	PF00815	Histidinol dehydrogenase
LI89_07230	PF01634	ATP phosphoribosyltransferase
LI89_07230	PF08029	HisG, C-terminal domain
LI89_07235	PF01370	NAD dependent epimerase/dehydratase family
LI89_07240	PF02653	LI89_07240
LI89_07245	PF00005	ABC transporter
LI89_07250	PF01548	LI89_07250
LI89_07250	PF02371	LI89_07250
LI89_07260	PF00465	Iron-containing alcohol dehydrogenase
LI89_07270	PF13520	Amino acid permease
LI89_07275	PF00929	Exonuclease
LI89_07275	PF08411	Exonuclease C-terminal
LI89_07280	PF07993	Male sterility protein
LI89_07285	PF13515	LI89_07285
LI89_07290	PF04363	LI89_07290
LI89_07295	PF02653	LI89_07295
LI89_07300	PF02653	LI89_07300
LI89_07305	PF00005	ABC transporter
LI89_07310	PF13407	Periplasmic binding protein domain
LI89_07315	PF13454	FAD-NAD(P)-binding
LI89_07325	PF00288	GHMP kinases N terminal domain
LI89_07330	PF00155	Aminotransferase class I and II
LI89_07335	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
LI89_07340	PF00871	Acetokinase family
LI89_07345	PF10662	Ethanolamine utilisation - propanediol utilisation
LI89_07350	PF00936	BMC domain
LI89_07355	PF00936	BMC domain
LI89_07360	PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit
LI89_07360	PF10531	SLBB domain
LI89_07360	PF13375	RnfC Barrel sandwich hybrid domain
LI89_07360	PF13534	4Fe-4S dicluster domain
LI89_07365	PF00465	Iron-containing alcohol dehydrogenase
LI89_07370	PF00171	Aldehyde dehydrogenase family
LI89_07375	PF01923	Cobalamin adenosyltransferase
LI89_07375	PF03928	Domain of unknown function (DUF336)
LI89_07380	PF03319	Ethanolamine utilisation protein EutN/carboxysome
LI89_07385	PF15953	LI89_07385
LI89_07390	PF06130	LI89_07390
LI89_07395	PF00936	BMC domain
LI89_07400	PF00936	BMC domain
LI89_07405	PF02288	Dehydratase medium subunit
LI89_07410	PF08841	Diol dehydratase reactivase ATPase-like domain
LI89_07415	PF02287	Dehydratase small subunit
LI89_07420	PF02288	Dehydratase medium subunit
LI89_07425	PF02286	Dehydratase large subunit
LI89_07430	PF00936	BMC domain
LI89_07435	PF00936	BMC domain
LI89_07440	PF00230	Major intrinsic protein
LI89_07445	PF10114	LI89_07445
LI89_07445	PF12833	Helix-turn-helix domain
LI89_07450	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
LI89_07450	PF07685	CobB/CobQ-like glutamine amidotransferase domain
LI89_07455	PF03186	LI89_07455
LI89_07460	PF02570	Precorrin-8X methylmutase
LI89_07465	PF01888	CbiD
LI89_07470	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
LI89_07475	PF13847	Methyltransferase domain
LI89_07480	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
LI89_07485	PF01890	Cobalamin synthesis G C-terminus
LI89_07485	PF11760	Cobalamin synthesis G N-terminal
LI89_07485	PF11761	LI89_07485
LI89_07490	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
LI89_07495	PF02571	LI89_07495
LI89_07500	PF06180	Cobalt chelatase (CbiK)
LI89_07505	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
LI89_07510	PF01891	Cobalt uptake substrate-specific transmembrane region
LI89_07515	PF02553	LI89_07515
LI89_07520	PF02361	Cobalt transport protein
LI89_07525	PF00005	ABC transporter
LI89_07530	PF07685	CobB/CobQ-like glutamine amidotransferase domain
LI89_07530	PF13500	AAA domain
LI89_07535	PF02283	Cobinamide kinase / cobinamide phosphate guanyltransferase
LI89_07540	PF02654	LI89_07540
LI89_07545	PF00300	Histidine phosphatase superfamily (branch 1)
LI89_07550	PF02277	Phosphoribosyltransferase
LI89_07555	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
LI89_07555	PF03466	LysR substrate binding domain
LI89_07560	PF00892	EamA-like transporter family
LI89_07565	PF01048	Phosphorylase superfamily
LI89_07570	PF03825	LI89_07570
LI89_07575	PF00196	Bacterial regulatory proteins, luxR family
LI89_07580	PF08786	Domain of unknown function (DUF1795)
LI89_07585	PF00691	OmpA family
LI89_07595	PF11397	LI89_07595
LI89_07600	PF00419	Fimbrial protein
LI89_07605	PF06812	LI89_07605
LI89_07610	PF06996	LI89_07610
LI89_07615	PF05947	LI89_07615
LI89_07620	PF00004	ATPase family associated with various cellular activities (AAA)
LI89_07620	PF07724	AAA domain (Cdc48 subfamily)
LI89_07620	PF10431	C-terminal, D2-small domain, of ClpB protein
LI89_07625	PF16970	LI89_07625
LI89_07630	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
LI89_07630	PF02753	Pili assembly chaperone PapD, C-terminal domain
LI89_07640	PF00419	Fimbrial protein
LI89_07645	PF05591	LI89_07645
LI89_07650	PF05943	LI89_07650
LI89_07655	PF05638	Protein of unknown function (DUF796)
LI89_07660	PF12790	Type VI secretion lipoprotein
LI89_07665	PF05936	LI89_07665
LI89_07670	PF00691	OmpA family
LI89_07670	PF09850	Uncharacterized protein conserved in bacteria (DUF2077)
LI89_07675	PF06744	LI89_07675
LI89_07675	PF06761	LI89_07675
LI89_07675	PF14331	LI89_07675
LI89_07685	PF05488	PAAR motif
LI89_07695	PF07024	ImpE protein
LI89_07700	PF04965	Gene 25-like lysozyme
LI89_07705	PF00764	Arginosuccinate synthase
LI89_07710	PF01554	MatE
LI89_07720	PF00977	Histidine biosynthesis protein
LI89_07725	PF08282	haloacid dehalogenase-like hydrolase
LI89_07730	PF00455	LI89_07730
LI89_07730	PF08220	DeoR-like helix-turn-helix domain
LI89_07735	PF00144	Beta-lactamase
LI89_07740	PF00072	Response regulator receiver domain
LI89_07740	PF01584	CheW-like domain
LI89_07745	PF00440	Bacterial regulatory proteins, tetR family
LI89_07750	PF00106	short chain dehydrogenase
LI89_07755	PF02627	Carboxymuconolactone decarboxylase family
LI89_07760	PF00005	ABC transporter
LI89_07765	PF03088	Strictosidine synthase
LI89_07770	PF02653	LI89_07770
LI89_07770	PF03088	Strictosidine synthase
LI89_07775	PF13407	Periplasmic binding protein domain
LI89_07780	PF02653	LI89_07780
LI89_07785	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
LI89_07785	PF03466	LysR substrate binding domain
LI89_07790	PF00107	Zinc-binding dehydrogenase
LI89_07790	PF08240	Alcohol dehydrogenase GroES-like domain
LI89_07795	PF00155	Aminotransferase class I and II
LI89_07795	PF00392	Bacterial regulatory proteins, gntR family
LI89_07800	PF00583	Acetyltransferase (GNAT) family
LI89_07805	PF02558	Ketopantoate reductase PanE/ApbA
LI89_07805	PF08546	Ketopantoate reductase PanE/ApbA C terminal
LI89_07815	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
LI89_07815	PF02753	Pili assembly chaperone PapD, C-terminal domain
LI89_07820	PF00419	Fimbrial protein
LI89_07825	PF00577	Outer membrane usher protein
LI89_07825	PF13953	PapC C-terminal domain
LI89_07825	PF13954	PapC N-terminal domain
LI89_07830	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
LI89_07830	PF02753	Pili assembly chaperone PapD, C-terminal domain
LI89_07835	PF00419	Fimbrial protein
LI89_07840	PF00072	Response regulator receiver domain
LI89_07840	PF00497	Bacterial extracellular solute-binding proteins, family 3
LI89_07840	PF00512	His Kinase A (phospho-acceptor) domain
LI89_07840	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
LI89_07845	PF00072	Response regulator receiver domain
LI89_07845	PF00196	Bacterial regulatory proteins, luxR family
LI89_07875	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)
LI89_07880	PF06114	Domain of unknown function (DUF955)
LI89_07880	PF13560	Helix-turn-helix domain
LI89_07895	PF01527	Transposase
LI89_07900	PF00665	Integrase core domain
LI89_07910	PF00005	ABC transporter
LI89_07910	PF08402	TOBE domain
LI89_07915	PF00528	Binding-protein-dependent transport system inner membrane component
LI89_07920	PF13343	Bacterial extracellular solute-binding protein
LI89_07925	PF07690	Major Facilitator Superfamily
LI89_07930	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
LI89_07930	PF05231	LI89_07930
LI89_07930	PF07730	Histidine kinase
LI89_07935	PF00072	Response regulator receiver domain
LI89_07935	PF00196	Bacterial regulatory proteins, luxR family
LI89_07940	PF00072	Response regulator receiver domain
LI89_07940	PF12431	LI89_07940
LI89_07945	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
LI89_07945	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
LI89_07945	PF17203	LI89_07945
LI89_07950	PF08218	Citrate lyase ligase C-terminal domain
LI89_07955	PF06857	LI89_07955
LI89_07960	PF03328	HpcH/HpaI aldolase/citrate lyase family
LI89_07965	PF04223	Citrate lyase, alpha subunit (CitF)
LI89_07970	PF03802	LI89_07970
LI89_07975	PF01874	ATP:dephospho-CoA triphosphoribosyl transferase
LI89_07980	PF00939	Sodium:sulfate symporter transmembrane region
LI89_07985	PF06808	LI89_07985
LI89_07990	PF04290	LI89_07990
LI89_07995	PF03480	Bacterial extracellular solute-binding protein, family 7
LI89_08000	PF01648	4'-phosphopantetheinyl transferase superfamily
LI89_08005	PF05118	Aspartyl/Asparaginyl beta-hydroxylase
LI89_08010	PF00083	Sugar (and other) transporter
LI89_08015	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
LI89_08020	PF13437	HlyD family secretion protein
LI89_08020	PF13533	Biotin-lipoyl like
LI89_08035	PF02321	Outer membrane efflux protein
LI89_08040	PF02687	LI89_08040
LI89_08040	PF12704	MacB-like periplasmic core domain
LI89_08045	PF00005	ABC transporter
LI89_08050	PF09831	LI89_08050
LI89_08055	PF00849	RNA pseudouridylate synthase
LI89_08065	PF06167	Glucose-regulated metallo-peptidase M90
LI89_08070	PF13407	Periplasmic binding protein domain
LI89_08075	PF00005	ABC transporter
LI89_08080	PF02653	LI89_08080
LI89_08085	PF02653	LI89_08085
LI89_08090	PF00294	pfkB family carbohydrate kinase
LI89_08095	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
LI89_08095	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
LI89_08100	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
LI89_08100	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
LI89_08105	PF06551	LI89_08105
LI89_08110	PF06551	LI89_08110
LI89_08115	PF06551	LI89_08115
LI89_08120	PF00577	Outer membrane usher protein
LI89_08120	PF13953	PapC C-terminal domain
LI89_08120	PF13954	PapC N-terminal domain
LI89_08125	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
LI89_08135	PF00483	Nucleotidyl transferase
LI89_08140	PF00328	Histidine phosphatase superfamily (branch 2)
LI89_08145	PF14001	LI89_08145
LI89_08150	PF11004	LI89_08150
LI89_08155	PF01037	AsnC family
LI89_08155	PF13412	Winged helix-turn-helix DNA-binding
LI89_08160	PF10777	LI89_08160
LI89_08165	PF00107	Zinc-binding dehydrogenase
LI89_08165	PF08240	Alcohol dehydrogenase GroES-like domain
LI89_08170	PF00703	Glycosyl hydrolases family 2
LI89_08170	PF02836	Glycosyl hydrolases family 2, TIM barrel domain
LI89_08170	PF02837	Glycosyl hydrolases family 2, sugar binding domain
LI89_08170	PF02929	Beta galactosidase small chain
LI89_08170	PF16353	LI89_08170
LI89_08175	PF00356	Bacterial regulatory proteins, lacI family
LI89_08175	PF13377	Periplasmic binding protein-like domain
LI89_08180	PF00313	'Cold-shock' DNA-binding domain
LI89_08190	PF10781	LI89_08190
LI89_08195	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
LI89_08195	PF00672	HAMP domain
LI89_08195	PF02203	Tar ligand binding domain homologue
LI89_08200	PF02515	CoA-transferase family III
LI89_08205	PF02308	LI89_08205
LI89_08210	PF00122	E1-E2 ATPase
LI89_08210	PF00689	Cation transporting ATPase, C-terminus
LI89_08210	PF00690	Cation transporter/ATPase, N-terminus
LI89_08210	PF00702	haloacid dehalogenase-like hydrolase
LI89_08215	PF00107	Zinc-binding dehydrogenase
LI89_08215	PF16884	LI89_08215
LI89_08220	PF00582	Universal stress protein family
LI89_08225	PF05247	Flagellar transcriptional activator (FlhD)
LI89_08230	PF05280	Flagellar transcriptional activator (FlhC)
LI89_08235	PF01618	LI89_08235
LI89_08240	PF00691	OmpA family
LI89_08240	PF13677	LI89_08240
LI89_08245	PF01584	CheW-like domain
LI89_08245	PF01627	Hpt domain
LI89_08245	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
LI89_08245	PF02895	Signal transducing histidine kinase, homodimeric domain
LI89_08245	PF09078	CheY binding
LI89_08250	PF01584	CheW-like domain
LI89_08255	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
LI89_08255	PF00672	HAMP domain
LI89_08255	PF02203	Tar ligand binding domain homologue
LI89_08260	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
LI89_08260	PF00672	HAMP domain
LI89_08260	PF02203	Tar ligand binding domain homologue
LI89_08265	PF01739	CheR methyltransferase, SAM binding domain
LI89_08265	PF03705	CheR methyltransferase, all-alpha domain
LI89_08270	PF00072	Response regulator receiver domain
LI89_08270	PF01339	CheB methylesterase
LI89_08275	PF00072	Response regulator receiver domain
LI89_08280	PF04344	Chemotaxis phosphatase, CheZ
LI89_08285	PF00082	Subtilase family
LI89_08290	PF01312	FlhB HrpN YscU SpaS Family
LI89_08295	PF00771	FHIPEP family
LI89_08300	PF06366	LI89_08300
LI89_08305	PF07979	Intimin C-type lectin domain
LI89_08305	PF09134	Invasin, domain 3
LI89_08305	PF11924	Protein of unknown function (DUF3442)
LI89_08310	PF05130	FlgN protein
LI89_08315	PF04316	Anti-sigma-28 factor, FlgM
LI89_08320	PF13144	SAF-like
LI89_08325	PF00460	Flagella basal body rod protein
LI89_08330	PF00460	Flagella basal body rod protein
LI89_08330	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
LI89_08335	PF03963	LI89_08335
LI89_08335	PF13860	FlgD Ig-like domain
LI89_08335	PF13861	FlgD Tudor-like domain
LI89_08340	PF00460	Flagella basal body rod protein
LI89_08340	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
LI89_08340	PF07559	Flagellar basal body protein FlaE
LI89_08345	PF00460	Flagella basal body rod protein
LI89_08345	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
LI89_08350	PF00460	Flagella basal body rod protein
LI89_08350	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
LI89_08355	PF02107	LI89_08355
LI89_08360	PF02119	LI89_08360
LI89_08365	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
LI89_08365	PF10135	LI89_08365
LI89_08375	PF00460	Flagella basal body rod protein
LI89_08375	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
LI89_08380	PF00669	Bacterial flagellin N-terminal helical region
LI89_08385	PF01311	LI89_08385
LI89_08390	PF01313	LI89_08390
LI89_08395	PF00813	LI89_08395
LI89_08400	PF04347	LI89_08400
LI89_08405	PF01052	Surface presentation of antigens (SPOA)
LI89_08405	PF16973	LI89_08405
LI89_08410	PF01052	Surface presentation of antigens (SPOA)
LI89_08410	PF02154	Flagellar motor switch protein FliM
LI89_08415	PF03748	LI89_08415
LI89_08420	PF02120	Flagellar hook-length control protein FliK
LI89_08425	PF02050	Flagellar FliJ protein
LI89_08430	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
LI89_08435	PF02108	LI89_08435
LI89_08440	PF01706	FliG C-terminal domain
LI89_08440	PF14841	FliG middle domain
LI89_08440	PF14842	FliG N-terminal domain
LI89_08445	PF01514	Secretory protein of YscJ/FliF family
LI89_08445	PF08345	LI89_08445
LI89_08450	PF02049	LI89_08450
LI89_08455	PF00730	HhH-GPD superfamily base excision DNA repair protein
LI89_08460	PF02743	Cache domain
LI89_08460	PF13487	HD domain
LI89_08465	PF12833	Helix-turn-helix domain
LI89_08470	PF05400	Flagellar protein FliT
LI89_08475	PF02561	Flagellar protein FliS
LI89_08480	PF02465	LI89_08480
LI89_08480	PF07195	LI89_08480
LI89_08480	PF07196	Flagellin hook IN motif
LI89_08485	PF00669	Bacterial flagellin N-terminal helical region
LI89_08485	PF00700	Bacterial flagellin C-terminal helical region
LI89_08490	PF00669	Bacterial flagellin N-terminal helical region
LI89_08490	PF00700	Bacterial flagellin C-terminal helical region
LI89_08495	PF00669	Bacterial flagellin N-terminal helical region
LI89_08495	PF00700	Bacterial flagellin C-terminal helical region
LI89_08500	PF00669	Bacterial flagellin N-terminal helical region
LI89_08500	PF00700	Bacterial flagellin C-terminal helical region
LI89_08510	PF04539	Sigma-70 region 3
LI89_08510	PF04542	Sigma-70 region 2
LI89_08510	PF04545	Sigma-70, region 4
LI89_08515	PF02899	Phage integrase, N-terminal SAM-like domain
LI89_08520	PF00291	Pyridoxal-phosphate dependent enzyme
LI89_08525	PF00497	Bacterial extracellular solute-binding proteins, family 3
LI89_08530	PF00528	Binding-protein-dependent transport system inner membrane component
LI89_08535	PF00005	ABC transporter
LI89_08550	PF00171	Aldehyde dehydrogenase family
LI89_08550	PF01619	Proline dehydrogenase
LI89_08550	PF14850	DNA-binding domain of Proline dehydrogenase
LI89_08555	PF00474	Sodium:solute symporter family
LI89_08560	PF03239	LI89_08560
LI89_08565	PF09375	Imelysin
LI89_08565	PF13473	Cupredoxin-like domain
LI89_08570	PF04261	Dyp-type peroxidase family
LI89_08575	PF03358	NADPH-dependent FMN reductase
LI89_08580	PF01381	Helix-turn-helix
LI89_08580	PF13239	LI89_08580
LI89_08585	PF01344	Kelch motif
LI89_08590	PF00860	Permease family
LI89_08595	PF01613	Flavin reductase like domain
LI89_08600	PF00881	Nitroreductase family
LI89_08605	PF00561	alpha/beta hydrolase fold
LI89_08610	PF01042	Endoribonuclease L-PSP
LI89_08615	PF00857	Isochorismatase family
LI89_08620	PF00296	Luciferase-like monooxygenase
LI89_08625	PF00440	Bacterial regulatory proteins, tetR family
LI89_08625	PF08362	YcdC-like protein, C-terminal region
LI89_08630	PF00324	Amino acid permease
LI89_08645	PF16105	LI89_08645
LI89_08650	PF08241	Methyltransferase domain
LI89_08665	PF00128	Alpha amylase, catalytic domain
LI89_08675	PF06942	LI89_08675
LI89_08680	PF10769	LI89_08680
LI89_08685	PF00072	Response regulator receiver domain
LI89_08685	PF00196	Bacterial regulatory proteins, luxR family
LI89_08690	PF01541	GIY-YIG catalytic domain
LI89_08690	PF02151	UvrB/uvrC motif
LI89_08690	PF08459	UvrC Helix-hairpin-helix N-terminal
LI89_08695	PF01066	CDP-alcohol phosphatidyltransferase
LI89_08725	PF05954	Phage late control gene D protein (GPD)
LI89_08730	PF06995	LI89_08730
LI89_08735	PF10145	LI89_08735
LI89_08740	PF06528	LI89_08740
LI89_08745	PF10109	LI89_08745
LI89_08750	PF04985	LI89_08750
LI89_08755	PF04984	Phage tail sheath protein
LI89_08755	PF17482	LI89_08755
LI89_08765	PF03406	LI89_08765
LI89_08765	PF12571	LI89_08765
LI89_08770	PF09684	LI89_08770
LI89_08775	PF04865	LI89_08775
LI89_08780	PF04965	Gene 25-like lysozyme
LI89_08785	PF04717	Phage-related baseplate assembly protein
LI89_08795	PF05069	LI89_08795
LI89_08800	PF06891	LI89_08800
LI89_08810	PF00959	Phage lysozyme
LI89_08815	PF16080	LI89_08815
LI89_08820	PF05489	Phage Tail Protein X
LI89_08825	PF05926	LI89_08825
LI89_08830	PF05944	LI89_08830
LI89_08835	PF05125	LI89_08835
LI89_08840	PF05929	LI89_08840
LI89_08845	PF03237	Terminase-like family
LI89_08845	PF06056	Putative ATPase subunit of terminase (gpP-like)
LI89_08845	PF17289	LI89_08845
LI89_08850	PF04860	Phage portal protein
LI89_08875	PF05840	LI89_08875
LI89_08880	PF17399	LI89_08880
LI89_08885	PF17399	LI89_08885
LI89_08890	PF10809	LI89_08890
LI89_08905	PF06892	LI89_08905
LI89_08915	PF07022	Bacteriophage CI repressor helix-turn-helix domain
LI89_08915	PF16452	LI89_08915
LI89_08920	PF00589	Phage integrase family
LI89_08930	PF13245	Part of AAA domain
LI89_08930	PF13538	UvrD-like helicase C-terminal domain
LI89_08940	PF00589	Phage integrase family
LI89_08945	PF13986	LI89_08945
LI89_08960	PF05565	LI89_08960
LI89_08980	PF00717	Peptidase S24-like
LI89_08980	PF01381	Helix-turn-helix
LI89_08985	PF14549	DNA-binding transcriptional regulator Cro
LI89_08990	PF06254	Protein of unknown function (DUF1019)
LI89_09000	PF13730	LI89_09000
LI89_09005	PF00772	DnaB-like helicase N terminal domain
LI89_09005	PF03796	DnaB-like helicase C terminal domain
LI89_09015	PF06440	DNA polymerase III, theta subunit
LI89_09040	PF07105	LI89_09040
LI89_09045	PF07102	Protein of unknown function (DUF1364)
LI89_09050	PF06576	LI89_09050
LI89_09060	PF00959	Phage lysozyme
LI89_09065	PF10828	LI89_09065
LI89_09085	PF06381	LI89_09085
LI89_09090	PF04233	LI89_09090
LI89_09100	PF09979	LI89_09100
LI89_09145	PF02368	Bacterial Ig-like domain (group 2)
LI89_09150	PF03544	Gram-negative bacterial TonB protein C-terminal
LI89_09180	PF06120	LI89_09180
LI89_09185	PF05939	LI89_09185
LI89_09195	PF05100	LI89_09195
LI89_09200	PF00877	NlpC/P60 family
LI89_09205	PF06805	LI89_09205
LI89_09210	PF09327	LI89_09210
LI89_09210	PF13550	LI89_09210
LI89_09230	PF02413	LI89_09230
LI89_09235	PF03212	Pertactin
LI89_09235	PF03797	Autotransporter beta-domain
LI89_09240	PF00239	Resolvase, N terminal domain
LI89_09240	PF07508	Recombinase
LI89_09245	PF01527	Transposase
LI89_09250	PF00665	Integrase core domain
LI89_09250	PF13276	LI89_09250
LI89_09255	PF08282	haloacid dehalogenase-like hydrolase
LI89_09260	PF07690	Major Facilitator Superfamily
LI89_09265	PF00480	ROK family
LI89_09270	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
LI89_09275	PF00583	Acetyltransferase (GNAT) family
LI89_09280	PF04343	LI89_09280
LI89_09285	PF00324	Amino acid permease
LI89_09295	PF03390	LI89_09295
LI89_09300	PF00072	Response regulator receiver domain
LI89_09305	PF00989	PAS fold
LI89_09305	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
LI89_09305	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
LI89_09305	PF17203	LI89_09305
LI89_09310	PF00455	LI89_09310
LI89_09310	PF08220	DeoR-like helix-turn-helix domain
LI89_09315	PF07005	Protein of unknown function, DUF1537
LI89_09315	PF17042	LI89_09315
LI89_09320	PF00596	Class II Aldolase and Adducin N-terminal domain
LI89_09325	PF01261	Xylose isomerase-like TIM barrel
LI89_09330	PF04960	Glutaminase
LI89_09335	PF07690	Major Facilitator Superfamily
LI89_09345	PF03239	LI89_09345
LI89_09350	PF10634	Fe2+ transport protein
LI89_09355	PF04945	YHS domain
LI89_09355	PF10080	LI89_09355
LI89_09360	PF02687	LI89_09360
LI89_09360	PF12704	MacB-like periplasmic core domain
LI89_09365	PF02687	LI89_09365
LI89_09365	PF12704	MacB-like periplasmic core domain
LI89_09370	PF00005	ABC transporter
LI89_09375	PF08534	Redoxin
LI89_09380	PF13442	Cytochrome C oxidase, cbb3-type, subunit III
LI89_09385	PF03848	Tellurite resistance protein TehB
LI89_09385	PF09313	Domain of unknown function (DUF1971)
LI89_09390	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
LI89_09390	PF03466	LysR substrate binding domain
LI89_09395	PF01411	tRNA synthetases class II (A)
LI89_09400	PF06276	Ferric iron reductase FhuF-like transporter
LI89_09400	PF11575	LI89_09400
LI89_09405	PF00557	Metallopeptidase family M24
LI89_09405	PF01321	Creatinase/Prolidase N-terminal domain
LI89_09415	PF01522	Polysaccharide deacetylase
LI89_09415	PF14883	Hypothetical glycosyl hydrolase family 13
LI89_09420	PF00535	Glycosyl transferase family 2
LI89_09425	PF13994	LI89_09425
LI89_09430	PF13302	Acetyltransferase (GNAT) domain
LI89_09440	PF02562	PhoH-like protein
LI89_09445	PF01699	Sodium/calcium exchanger protein
LI89_09450	PF04954	Siderophore-interacting protein
LI89_09450	PF08021	Siderophore-interacting FAD-binding domain
LI89_09455	PF07690	Major Facilitator Superfamily
LI89_09460	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
LI89_09460	PF03466	LysR substrate binding domain
LI89_09465	PF00672	HAMP domain
LI89_09465	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
LI89_09465	PF07730	Histidine kinase
LI89_09465	PF13675	Type IV pili methyl-accepting chemotaxis transducer N-term
LI89_09475	PF02322	LI89_09475
LI89_09480	PF01654	LI89_09480
LI89_09485	PF00155	Aminotransferase class I and II
LI89_09485	PF00392	Bacterial regulatory proteins, gntR family
LI89_09490	PF00202	Aminotransferase class-III
LI89_09495	PF04958	Arginine N-succinyltransferase beta subunit
LI89_09500	PF00171	Aldehyde dehydrogenase family
LI89_09505	PF04996	Succinylarginine dihydrolase
LI89_09510	PF04952	Succinylglutamate desuccinylase / Aspartoacylase family
LI89_09515	PF00267	Gram-negative porin
LI89_09520	PF05013	N-formylglutamate amidohydrolase
LI89_09525	PF01979	Amidohydrolase family
LI89_09530	PF00392	Bacterial regulatory proteins, gntR family
LI89_09530	PF07702	UTRA domain
LI89_09535	PF01979	Amidohydrolase family
LI89_09540	PF05962	HutD
LI89_09545	PF09223	YodA lipocalin-like domain
LI89_09555	PF02502	Ribose/Galactose Isomerase
LI89_09555	PF12408	Ribose-5-phosphate isomerase
LI89_09560	PF01476	LysM domain
LI89_09560	PF01551	Peptidase family M23
LI89_09565	PF01116	Fructose-bisphosphate aldolase class-II
LI89_09570	PF01380	SIS domain
LI89_09575	PF03610	PTS system fructose IIA component
LI89_09580	PF03613	LI89_09580
LI89_09585	PF03609	LI89_09585
LI89_09590	PF03830	PTS system sorbose subfamily IIB component
LI89_09595	PF08013	Tagatose 6 phosphate kinase
LI89_09600	PF00455	LI89_09600
LI89_09600	PF08220	DeoR-like helix-turn-helix domain
LI89_09610	PF06551	LI89_09610
LI89_09615	PF00849	RNA pseudouridylate synthase
LI89_09615	PF01479	S4 domain
LI89_09620	PF03616	LI89_09620
LI89_09630	PF00892	EamA-like transporter family
LI89_09640	PF00924	Mechanosensitive ion channel
LI89_09645	PF13417	Glutathione S-transferase, N-terminal domain
LI89_09645	PF14834	Glutathione S-transferase, C-terminal domain
LI89_09650	PF13302	Acetyltransferase (GNAT) domain
LI89_09665	PF04266	ASCH domain
LI89_09670	PF07351	LI89_09670
LI89_09675	PF00989	PAS fold
LI89_09675	PF00990	GGDEF domain
LI89_09675	PF08447	PAS fold
LI89_09675	PF08448	PAS fold
LI89_09680	PF05229	LI89_09680
LI89_09685	PF00577	Outer membrane usher protein
LI89_09685	PF13953	PapC C-terminal domain
LI89_09690	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
LI89_09695	PF05229	LI89_09695
LI89_09700	PF05229	LI89_09700
LI89_09705	PF05229	LI89_09705
LI89_09710	PF07690	Major Facilitator Superfamily
LI89_09715	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
LI89_09715	PF03466	LysR substrate binding domain
LI89_09720	PF02470	LI89_09720
LI89_09725	PF04403	LI89_09725
LI89_09730	PF13185	GAF domain
LI89_09735	PF04352	ProQ/FINO family
LI89_09735	PF17516	LI89_09735
LI89_09740	PF00595	PDZ domain (Also known as DHR or GLGF)
LI89_09740	PF03572	Peptidase family S41
LI89_09740	PF11818	LI89_09740
LI89_09745	PF01435	Peptidase family M48
LI89_09760	PF03895	YadA-like C-terminal region
LI89_09770	PF07690	Major Facilitator Superfamily
LI89_09775	PF14583	Oligogalacturonate lyase
LI89_09780	PF01614	Bacterial transcriptional regulator
LI89_09780	PF09339	IclR helix-turn-helix domain
LI89_09785	PF01471	Putative peptidoglycan binding domain
LI89_09785	PF01510	N-acetylmuramoyl-L-alanine amidase
LI89_09790	PF00375	Sodium:dicarboxylate symporter family
LI89_09795	PF04307	LI89_09795
LI89_09800	PF06178	Oligogalacturonate-specific porin protein (KdgM)
LI89_09805	PF13416	Bacterial extracellular solute-binding protein
LI89_09810	PF00005	ABC transporter
LI89_09810	PF08402	TOBE domain
LI89_09815	PF00528	Binding-protein-dependent transport system inner membrane component
LI89_09820	PF00528	Binding-protein-dependent transport system inner membrane component
LI89_09830	PF13561	Enoyl-(Acyl carrier protein) reductase
LI89_09835	PF04962	KduI/IolB family
LI89_09840	PF07883	Cupin domain
LI89_09845	PF13419	Haloacid dehalogenase-like hydrolase
LI89_09850	PF14002	LI89_09850
LI89_09855	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
LI89_09855	PF03466	LysR substrate binding domain
LI89_09860	PF02550	Acetyl-CoA hydrolase/transferase N-terminal domain
LI89_09860	PF13336	Acetyl-CoA hydrolase/transferase C-terminal domain
LI89_09865	PF00378	Enoyl-CoA hydratase/isomerase family
LI89_09870	PF03308	ArgK protein
LI89_09875	PF01642	Methylmalonyl-CoA mutase
LI89_09875	PF02310	B12 binding domain
LI89_09880	PF03881	Fructosamine kinase
LI89_09885	PF00950	LI89_09885
LI89_09890	PF00950	LI89_09890
LI89_09895	PF00005	ABC transporter
LI89_09900	PF01297	Periplasmic solute binding protein family
LI89_09905	PF01464	Transglycosylase SLT domain
LI89_09910	PF01914	LI89_09910
LI89_09920	PF12680	SnoaL-like domain
LI89_09935	PF04474	LI89_09935
LI89_09940	PF13619	LI89_09940
LI89_09950	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
LI89_09950	PF02824	TGS domain
LI89_09950	PF03129	Anticodon binding domain
LI89_09950	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
LI89_09955	PF00707	Translation initiation factor IF-3, C-terminal domain
LI89_09960	PF01632	Ribosomal protein L35
LI89_09965	PF00453	Ribosomal protein L20
LI89_09970	PF01409	tRNA synthetases class II core domain (F)
LI89_09970	PF02912	Aminoacyl tRNA synthetase class II, N-terminal domain
LI89_09975	PF01588	Putative tRNA binding domain
LI89_09975	PF03147	Ferredoxin-fold anticodon binding domain
LI89_09975	PF03483	B3/4 domain
LI89_09975	PF03484	tRNA synthetase B5 domain
LI89_09980	PF00216	Bacterial DNA-binding protein
LI89_09990	PF10697	LI89_09990
LI89_09995	PF01032	FecCD transport family
LI89_10000	PF00255	Glutathione peroxidase
LI89_10005	PF00005	ABC transporter
LI89_10010	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
LI89_10015	PF00535	Glycosyl transferase family 2
LI89_10020	PF00551	Formyl transferase
LI89_10020	PF01370	NAD dependent epimerase/dehydratase family
LI89_10020	PF02911	Formyl transferase, C-terminal domain
LI89_10025	PF01522	Polysaccharide deacetylase
LI89_10030	PF02366	LI89_10030
LI89_10035	PF00892	EamA-like transporter family
LI89_10045	PF00877	NlpC/P60 family
LI89_10050	PF03099	Biotin/lipoate A/B protein ligase family
LI89_10050	PF10437	Bacterial lipoate protein ligase C-terminus
LI89_10055	PF02696	LI89_10055
LI89_10060	PF01497	Periplasmic binding protein
LI89_10065	PF05171	Haemin-degrading HemS
LI89_10070	PF00593	TonB dependent receptor
LI89_10070	PF07715	TonB-dependent Receptor Plug Domain
LI89_10075	PF10636	Hemin uptake protein hemP
LI89_10080	PF00793	DAHP synthetase I family
LI89_10085	PF03618	LI89_10085
LI89_10090	PF00391	PEP-utilising enzyme, mobile domain
LI89_10090	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
LI89_10090	PF02896	PEP-utilising enzyme, TIM barrel domain
LI89_10095	PF01594	LI89_10095
LI89_10100	PF01565	FAD binding domain
LI89_10100	PF02913	FAD linked oxidases, C-terminal domain
LI89_10100	PF13183	4Fe-4S dicluster domain
LI89_10105	PF03061	Thioesterase superfamily
LI89_10110	PF01521	Iron-sulphur cluster biosynthesis
LI89_10115	PF01458	Uncharacterized protein family (UPF0051)
LI89_10120	PF00005	ABC transporter
LI89_10125	PF01458	Uncharacterized protein family (UPF0051)
LI89_10130	PF00266	Aminotransferase class-V
LI89_10135	PF02657	Fe-S metabolism associated domain
LI89_10140	PF03734	L,D-transpeptidase catalytic domain
LI89_10145	PF04728	Lipoprotein leucine-zipper
LI89_10150	PF00224	Pyruvate kinase, barrel domain
LI89_10150	PF02887	Pyruvate kinase, alpha/beta domain
LI89_10170	PF01554	MatE
LI89_10175	PF00677	Lumazine binding domain
LI89_10180	PF02353	Mycolic acid cyclopropane synthetase
LI89_10185	PF07690	Major Facilitator Superfamily
LI89_10190	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
LI89_10190	PF03466	LysR substrate binding domain
LI89_10195	PF00356	Bacterial regulatory proteins, lacI family
LI89_10195	PF13377	Periplasmic binding protein-like domain
LI89_10205	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
LI89_10205	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
LI89_10210	PF00877	NlpC/P60 family
LI89_10215	PF00462	Glutaredoxin
LI89_10220	PF00929	Exonuclease
LI89_10225	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
LI89_10230	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
LI89_10235	PF00440	Bacterial regulatory proteins, tetR family
LI89_10235	PF16925	LI89_10235
LI89_10240	PF00884	Sulfatase
LI89_10240	PF08019	LI89_10240
LI89_10245	PF06945	LI89_10245
LI89_10250	PF00248	Aldo/keto reductase family
LI89_10255	PF04632	LI89_10255
LI89_10260	PF13437	HlyD family secretion protein
LI89_10260	PF13533	Biotin-lipoyl like
LI89_10265	PF07869	LI89_10265
LI89_10270	PF01047	MarR family
LI89_10275	PF05433	LI89_10275
LI89_10280	PF03702	Uncharacterised protein family (UPF0075)
LI89_10285	PF09864	Membrane-bound lysozyme-inhibitor of c-type lysozyme
LI89_10290	PF01243	Pyridoxamine 5'-phosphate oxidase
LI89_10290	PF10590	Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region
LI89_10295	PF00579	tRNA synthetases class I (W and Y)
LI89_10295	PF01479	S4 domain
LI89_10300	PF08543	Phosphomethylpyrimidine kinase
LI89_10305	PF00043	Glutathione S-transferase, C-terminal domain
LI89_10305	PF02798	Glutathione S-transferase, N-terminal domain
LI89_10310	PF11656	LI89_10310
LI89_10315	PF06930	LI89_10315
LI89_10320	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
LI89_10330	PF00854	POT family
LI89_10335	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
LI89_10335	PF03466	LysR substrate binding domain
LI89_10350	PF00005	ABC transporter
LI89_10355	PF00005	ABC transporter
LI89_10355	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
LI89_10360	PF00528	Binding-protein-dependent transport system inner membrane component
LI89_10360	PF12911	LI89_10360
LI89_10365	PF00528	Binding-protein-dependent transport system inner membrane component
LI89_10375	PF02917	Pertussis toxin, subunit 1
LI89_10385	PF00158	Sigma-54 interaction domain
LI89_10385	PF02954	Bacterial regulatory protein, Fis family
LI89_10390	PF04012	LI89_10390
LI89_10395	PF06667	LI89_10395
LI89_10400	PF04024	LI89_10400
LI89_10405	PF09584	LI89_10405
LI89_10410	PF04317	LI89_10410
LI89_10415	PF05128	LI89_10415
LI89_10420	PF08808	LI89_10420
LI89_10425	PF09722	LI89_10425
LI89_10430	PF00158	Sigma-54 interaction domain
LI89_10430	PF00989	PAS fold
LI89_10435	PF08534	Redoxin
LI89_10440	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
LI89_10440	PF13378	Enolase C-terminal domain-like
LI89_10445	PF00246	Zinc carboxypeptidase
LI89_10450	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
LI89_10465	PF01544	CorA-like Mg2+ transporter protein
LI89_10470	PF01171	PP-loop family
LI89_10475	PF00874	PRD domain
LI89_10475	PF03123	CAT RNA binding domain
LI89_10480	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
LI89_10480	PF00367	phosphotransferase system, EIIB
LI89_10480	PF02378	Phosphotransferase system, EIIC
LI89_10485	PF00232	Glycosyl hydrolase family 1
LI89_10490	PF01558	Pyruvate ferredoxin/flavodoxin oxidoreductase
LI89_10490	PF01855	Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
LI89_10490	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
LI89_10490	PF10371	Domain of unknown function
LI89_10490	PF12838	4Fe-4S dicluster domain
LI89_10490	PF17147	LI89_10490
LI89_10495	PF00893	Small Multidrug Resistance protein
LI89_10500	PF02308	LI89_10500
LI89_10505	PF03891	LI89_10505
LI89_10510	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
LI89_10510	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
LI89_10515	PF11739	LI89_10515
LI89_10520	PF13617	LI89_10520
LI89_10525	PF07027	LI89_10525
LI89_10530	PF07690	Major Facilitator Superfamily
LI89_10535	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
LI89_10535	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
LI89_10540	PF01232	Mannitol dehydrogenase Rossmann domain
LI89_10540	PF08125	Mannitol dehydrogenase C-terminal domain
LI89_10545	PF04198	Putative sugar-binding domain
LI89_10550	PF02525	Flavodoxin-like fold
LI89_10555	PF00270	DEAD/DEAH box helicase
LI89_10555	PF00271	Helicase conserved C-terminal domain
LI89_10555	PF04408	Helicase associated domain (HA2)
LI89_10555	PF07717	Oligonucleotide/oligosaccharide-binding (OB)-fold
LI89_10555	PF11898	LI89_10555
LI89_10560	PF05973	LI89_10560
LI89_10565	PF01381	Helix-turn-helix
LI89_10570	PF00089	Trypsin
LI89_10585	PF02074	Carboxypeptidase Taq (M32) metallopeptidase
LI89_10590	PF00672	HAMP domain
LI89_10590	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
LI89_10595	PF00072	Response regulator receiver domain
LI89_10595	PF00486	Transcriptional regulatory protein, C terminal
LI89_10605	PF13520	Amino acid permease
LI89_10610	PF07338	Protein of unknown function (DUF1471)
LI89_10620	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
LI89_10620	PF05222	Alanine dehydrogenase/PNT, N-terminal domain
LI89_10620	PF12769	Domain of unknown function (DUF3814)
LI89_10625	PF02233	NAD(P) transhydrogenase beta subunit
LI89_10630	PF00582	Universal stress protein family
LI89_10635	PF00027	Cyclic nucleotide-binding domain
LI89_10635	PF13545	Crp-like helix-turn-helix domain
LI89_10640	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
LI89_10640	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
LI89_10645	PF05013	N-formylglutamate amidohydrolase
LI89_10650	PF04463	LI89_10650
LI89_10655	PF06445	GyrI-like small molecule binding domain
LI89_10660	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
LI89_10660	PF03466	LysR substrate binding domain
LI89_10665	PF13561	Enoyl-(Acyl carrier protein) reductase
LI89_10670	PF00245	Alkaline phosphatase
LI89_10675	PF00294	pfkB family carbohydrate kinase
LI89_10680	PF07690	Major Facilitator Superfamily
LI89_10685	PF14486	Domain of unknown function (DUF4432)
LI89_10695	PF13208	LI89_10695
LI89_10695	PF15615	LI89_10695
LI89_10700	PF13419	Haloacid dehalogenase-like hydrolase
LI89_10705	PF13710	ACT domain
LI89_10710	PF00205	Thiamine pyrophosphate enzyme, central domain
LI89_10710	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
LI89_10710	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
LI89_10715	PF10139	LI89_10715
LI89_10720	PF07520	LI89_10720
LI89_10730	PF07690	Major Facilitator Superfamily
LI89_10735	PF00459	Inositol monophosphatase family
LI89_10740	PF00356	Bacterial regulatory proteins, lacI family
LI89_10740	PF13377	Periplasmic binding protein-like domain
LI89_10745	PF01048	Phosphorylase superfamily
LI89_10745	PF10423	Bacterial AMP nucleoside phosphorylase N-terminus
LI89_10750	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
LI89_10750	PF03466	LysR substrate binding domain
LI89_10755	PF00795	Carbon-nitrogen hydrolase
LI89_10765	PF02274	Amidinotransferase
LI89_10770	PF00497	Bacterial extracellular solute-binding proteins, family 3
LI89_10775	PF00528	Binding-protein-dependent transport system inner membrane component
LI89_10780	PF00528	Binding-protein-dependent transport system inner membrane component
LI89_10785	PF01037	AsnC family
LI89_10785	PF13412	Winged helix-turn-helix DNA-binding
LI89_10790	PF04952	Succinylglutamate desuccinylase / Aspartoacylase family
LI89_10795	PF07992	Pyridine nucleotide-disulphide oxidoreductase
LI89_10800	PF00258	Flavodoxin
LI89_10800	PF00301	Rubredoxin
LI89_10800	PF00753	Metallo-beta-lactamase superfamily
LI89_10805	PF00158	Sigma-54 interaction domain
LI89_10805	PF01590	GAF domain
LI89_10810	PF01047	MarR family
LI89_10815	PF13437	HlyD family secretion protein
LI89_10815	PF13533	Biotin-lipoyl like
LI89_10820	PF12698	ABC-2 family transporter protein
LI89_10825	PF02798	Glutathione S-transferase, N-terminal domain
LI89_10825	PF13410	Glutathione S-transferase, C-terminal domain
LI89_10830	PF13449	Esterase-like activity of phytase
LI89_10840	PF07690	Major Facilitator Superfamily
LI89_10845	PF08448	PAS fold
LI89_10850	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
LI89_10855	PF07338	Protein of unknown function (DUF1471)
LI89_10860	PF07690	Major Facilitator Superfamily
LI89_10865	PF00106	short chain dehydrogenase
LI89_10870	PF02694	LI89_10870
LI89_10880	PF10503	Esterase PHB depolymerase
LI89_10885	PF06932	LI89_10885
LI89_10890	PF06649	LI89_10890
LI89_10900	PF00654	Voltage gated chloride channel
LI89_10905	PF13500	AAA domain
LI89_10910	PF00480	ROK family
LI89_10915	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
LI89_10915	PF03466	LysR substrate binding domain
LI89_10920	PF07690	Major Facilitator Superfamily
LI89_10925	PF09851	LI89_10925
LI89_10925	PF13396	LI89_10925
LI89_10930	PF13354	Beta-lactamase enzyme family
LI89_10935	PF05472	DNA replication terminus site-binding protein (Ter protein)
LI89_10940	PF00196	Bacterial regulatory proteins, luxR family
LI89_10945	PF00206	Lyase
LI89_10945	PF10415	Fumarase C C-terminus
LI89_10950	PF01238	Phosphomannose isomerase type I
LI89_10955	PF06097	LI89_10955
LI89_10960	PF00132	Bacterial transferase hexapeptide (six repeats)
LI89_10965	PF00356	Bacterial regulatory proteins, lacI family
LI89_10965	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
LI89_10970	PF00367	phosphotransferase system, EIIB
LI89_10970	PF02378	Phosphotransferase system, EIIC
LI89_10975	PF00155	Aminotransferase class I and II
LI89_10980	PF00962	Adenosine/AMP deaminase
LI89_10985	PF13593	SBF-like CPA transporter family (DUF4137)
LI89_10990	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
LI89_10990	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
LI89_10995	PF02311	AraC-like ligand binding domain
LI89_10995	PF12833	Helix-turn-helix domain
LI89_11000	PF02653	LI89_11000
LI89_11005	PF00005	ABC transporter
LI89_11010	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
LI89_11015	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
LI89_11015	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
LI89_11020	PF02610	L-arabinose isomerase
LI89_11020	PF11762	L-arabinose isomerase C-terminal domain
LI89_11025	PF00005	ABC transporter
LI89_11025	PF00664	ABC transporter transmembrane region
LI89_11025	PF03412	Peptidase C39 family
LI89_11030	PF13437	HlyD family secretion protein
LI89_11030	PF13533	Biotin-lipoyl like
LI89_11045	PF01268	Formate--tetrahydrofolate ligase
LI89_11050	PF10754	LI89_11050
LI89_11060	PF02508	LI89_11060
LI89_11065	PF04060	Putative Fe-S cluster
LI89_11065	PF14697	4Fe-4S dicluster domain
LI89_11070	PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit
LI89_11070	PF10531	SLBB domain
LI89_11070	PF13237	4Fe-4S dicluster domain
LI89_11070	PF13375	RnfC Barrel sandwich hybrid domain
LI89_11075	PF06445	GyrI-like small molecule binding domain
LI89_11075	PF12833	Helix-turn-helix domain
LI89_11080	PF03116	LI89_11080
LI89_11085	PF04205	FMN-binding domain
LI89_11090	PF02508	LI89_11090
LI89_11095	PF00633	Helix-hairpin-helix motif
LI89_11095	PF00730	HhH-GPD superfamily base excision DNA repair protein
LI89_11095	PF10576	Iron-sulfur binding domain of endonuclease III
LI89_11110	PF00384	Molybdopterin oxidoreductase
LI89_11110	PF01568	Molydopterin dinucleotide binding domain
LI89_11115	PF00575	S1 RNA binding domain
LI89_11115	PF00773	RNB domain
LI89_11115	PF08206	Ribonuclease B OB domain
LI89_11120	PF02554	LI89_11120
LI89_11120	PF13722	LI89_11120
LI89_11125	PF04328	LI89_11125
LI89_11130	PF00923	Transaldolase
LI89_11135	PF00455	LI89_11135
LI89_11135	PF08220	DeoR-like helix-turn-helix domain
LI89_11140	PF09932	LI89_11140
LI89_11145	PF00596	Class II Aldolase and Adducin N-terminal domain
LI89_11150	PF05433	LI89_11150
LI89_11155	PF01253	Translation initiation factor SUI1
LI89_11160	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
LI89_11170	PF07338	Protein of unknown function (DUF1471)
LI89_11175	PF03594	LI89_11175
LI89_11180	PF01381	Helix-turn-helix
LI89_11180	PF07883	Cupin domain
LI89_11190	PF13176	Tetratricopeptide repeat
LI89_11190	PF13432	Tetratricopeptide repeat
LI89_11195	PF06305	LI89_11195
LI89_11200	PF01569	PAP2 superfamily
LI89_11205	PF00925	GTP cyclohydrolase II
LI89_11210	PF00330	Aconitase family (aconitate hydratase)
LI89_11210	PF00694	Aconitase C-terminal domain
LI89_11225	PF13102	Phage integrase SAM-like domain
LI89_11245	PF03864	Phage major capsid protein E
LI89_11270	PF13730	LI89_11270
LI89_11290	PF00239	Resolvase, N terminal domain
LI89_11290	PF02796	Helix-turn-helix domain of resolvase
LI89_11300	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
LI89_11300	PF03466	LysR substrate binding domain
LI89_11305	PF01131	DNA topoisomerase
LI89_11305	PF01396	LI89_11305
LI89_11305	PF01751	Toprim domain
LI89_11305	PF08272	Topoisomerase I zinc-ribbon-like
LI89_11310	PF10692	Protein of unknown function (DUF2498)
LI89_11315	PF01343	Peptidase family S49
LI89_11315	PF08496	LI89_11315
LI89_11320	PF00106	short chain dehydrogenase
LI89_11325	PF02572	ATP:corrinoid adenosyltransferase BtuR/CobO/CobP
LI89_11325	PF12557	Cob(I)alamin adenosyltransferase N terminal
LI89_11335	PF00849	RNA pseudouridylate synthase
LI89_11335	PF01479	S4 domain
LI89_11340	PF01300	Telomere recombination
LI89_11345	PF02811	PHP domain
LI89_11350	PF00425	chorismate binding enzyme
LI89_11350	PF04715	Anthranilate synthase component I, N terminal region
LI89_11355	PF00117	Glutamine amidotransferase class-I
LI89_11360	PF00591	Glycosyl transferase family, a/b domain
LI89_11360	PF02885	Glycosyl transferase family, helical bundle domain
LI89_11365	PF00218	Indole-3-glycerol phosphate synthase
LI89_11365	PF00697	N-(5'phosphoribosyl)anthranilate (PRA) isomerase
LI89_11370	PF00291	Pyridoxal-phosphate dependent enzyme
LI89_11375	PF00290	Tryptophan synthase alpha chain
LI89_11380	PF04972	BON domain
LI89_11385	PF03922	OmpW family
LI89_11390	PF03692	LI89_11390
LI89_11395	PF06790	LI89_11395
LI89_11400	PF00916	LI89_11400
LI89_11400	PF01740	STAS domain
LI89_11405	PF04279	LI89_11405
LI89_11410	PF03061	Thioesterase superfamily
LI89_11415	PF03544	Gram-negative bacterial TonB protein C-terminal
LI89_11415	PF16031	LI89_11415
LI89_11420	PF03795	YCII-related domain
LI89_11430	PF00563	EAL domain
LI89_11435	PF13091	PLD-like domain
LI89_11435	PF13396	LI89_11435
LI89_11440	PF04269	Protein of unknown function, DUF440
LI89_11445	PF00005	ABC transporter
LI89_11445	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
LI89_11450	PF00005	ABC transporter
LI89_11450	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
LI89_11455	PF00528	Binding-protein-dependent transport system inner membrane component
LI89_11455	PF12911	LI89_11455
LI89_11460	PF00528	Binding-protein-dependent transport system inner membrane component
LI89_11465	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
LI89_11470	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
LI89_11475	PF01914	LI89_11475
LI89_11480	PF00171	Aldehyde dehydrogenase family
LI89_11480	PF00465	Iron-containing alcohol dehydrogenase
LI89_11485	PF00265	Thymidine kinase
LI89_11495	PF00816	H-NS histone family
LI89_11500	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
LI89_11500	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
LI89_11500	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
LI89_11505	PF00072	Response regulator receiver domain
LI89_11510	PF01734	Patatin-like phospholipase
LI89_11515	PF13508	Acetyltransferase (GNAT) domain
LI89_11520	PF02810	SEC-C motif
LI89_11525	PF00551	Formyl transferase
LI89_11525	PF01842	ACT domain
LI89_11545	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
LI89_11550	PF03372	Endonuclease/Exonuclease/phosphatase family
LI89_11555	PF00293	NUDIX domain
LI89_11560	PF07383	LI89_11560
LI89_11565	PF01131	DNA topoisomerase
LI89_11565	PF01751	Toprim domain
LI89_11570	PF00586	AIR synthase related protein, N-terminal domain
LI89_11570	PF02769	AIR synthase related protein, C-terminal domain
LI89_11575	PF00881	Nitroreductase family
LI89_11580	PF01343	Peptidase family S49
LI89_11585	PF00710	Asparaginase
LI89_11590	PF00857	Isochorismatase family
LI89_11595	PF07023	LI89_11595
LI89_11600	PF01641	SelR domain
LI89_11605	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
LI89_11605	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
LI89_11610	PF01263	Aldose 1-epimerase
LI89_11615	PF06629	LI89_11615
LI89_11620	PF06798	LI89_11620
LI89_11620	PF08298	PrkA AAA domain
LI89_11625	PF04285	LI89_11625
LI89_11630	PF00892	EamA-like transporter family
LI89_11640	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
LI89_11640	PF03466	LysR substrate binding domain
LI89_11645	PF02678	Pirin
LI89_11645	PF05726	Pirin C-terminal cupin domain
LI89_11650	PF00563	EAL domain
LI89_11650	PF00990	GGDEF domain
LI89_11650	PF08447	PAS fold
LI89_11650	PF13185	GAF domain
LI89_11650	PF13426	PAS domain
LI89_11655	PF07690	Major Facilitator Superfamily
LI89_11660	PF00842	Alanine racemase, C-terminal domain
LI89_11660	PF01168	Alanine racemase, N-terminal domain
LI89_11665	PF01266	FAD dependent oxidoreductase
LI89_11670	PF04293	LI89_11670
LI89_11675	PF00392	Bacterial regulatory proteins, gntR family
LI89_11675	PF07840	FadR C-terminal domain
LI89_11680	PF06450	LI89_11680
LI89_11685	PF02600	Disulfide bond formation protein DsbB
LI89_11690	PF00132	Bacterial transferase hexapeptide (six repeats)
LI89_11690	PF13720	Udp N-acetylglucosamine O-acyltransferase; Domain 2
LI89_11700	PF03692	LI89_11700
LI89_11705	PF01557	Fumarylacetoacetate (FAA) hydrolase family
LI89_11710	PF13406	Transglycosylase SLT domain
LI89_11715	PF05166	YcgL domain
LI89_11725	PF03775	Septum formation inhibitor MinC, C-terminal domain
LI89_11725	PF05209	Septum formation inhibitor MinC, N-terminal domain
LI89_11730	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
LI89_11735	PF03776	Septum formation topological specificity factor MinE
LI89_11740	PF00570	HRDC domain
LI89_11740	PF01612	3'-5' exonuclease
LI89_11745	PF00501	AMP-binding enzyme
LI89_11745	PF13193	AMP-binding enzyme C-terminal domain
LI89_11750	PF03843	LI89_11750
LI89_11755	PF00814	Glycoprotease family
LI89_11760	PF06733	DEAD_2
LI89_11760	PF13307	Helicase C-terminal domain
LI89_11765	PF01042	Endoribonuclease L-PSP
LI89_11770	PF00893	Small Multidrug Resistance protein
LI89_11775	PF00893	Small Multidrug Resistance protein
LI89_11780	PF01081	KDPG and KHG aldolase
LI89_11785	PF00479	Glucose-6-phosphate dehydrogenase, NAD binding domain
LI89_11785	PF02781	Glucose-6-phosphate dehydrogenase, C-terminal domain
LI89_11790	PF01380	SIS domain
LI89_11790	PF01418	Helix-turn-helix domain, rpiR family
LI89_11795	PF00224	Pyruvate kinase, barrel domain
LI89_11795	PF02887	Pyruvate kinase, alpha/beta domain
LI89_11800	PF03279	LI89_11800
LI89_11805	PF01551	Peptidase family M23
LI89_11805	PF04225	Opacity-associated protein A LysM-like domain
LI89_11805	PF08525	LI89_11805
LI89_11810	PF01297	Periplasmic solute binding protein family
LI89_11815	PF00005	ABC transporter
LI89_11820	PF00950	LI89_11820
LI89_11825	PF00854	POT family
LI89_11830	PF05491	Holliday junction DNA helicase ruvB C-terminus
LI89_11830	PF05496	Holliday junction DNA helicase ruvB N-terminus
LI89_11835	PF01330	RuvA N terminal domain
LI89_11835	PF07499	RuvA, C-terminal domain
LI89_11835	PF14520	Helix-hairpin-helix domain
LI89_11840	PF02075	Crossover junction endodeoxyribonuclease RuvC
LI89_11845	PF01709	Transcriptional regulator
LI89_11850	PF00293	NUDIX domain
LI89_11855	PF00152	tRNA synthetases class II (D, K and N)
LI89_11855	PF01336	OB-fold nucleic acid binding domain
LI89_11855	PF02938	GAD domain
LI89_11860	PF00857	Isochorismatase family
LI89_11865	PF01904	Protein of unknown function DUF72
LI89_11870	PF01124	MAPEG family
LI89_11875	PF13649	Methyltransferase domain
LI89_11880	PF08003	Protein of unknown function (DUF1698)
LI89_11885	PF03932	CutC family
LI89_11890	PF06185	YecM protein
LI89_11895	PF00750	tRNA synthetases class I (R)
LI89_11895	PF03485	Arginyl tRNA synthetase N terminal domain
LI89_11895	PF05746	DALR anticodon binding domain
LI89_11900	PF03023	LI89_11900
LI89_11905	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
LI89_11910	PF04337	Protein of unknown function, DUF480
LI89_11915	PF13302	Acetyltransferase (GNAT) domain
LI89_11925	PF13988	LI89_11925
LI89_11945	PF07690	Major Facilitator Superfamily
LI89_11950	PF07273	Protein of unknown function (DUF1439)
LI89_11955	PF02613	Nitrate reductase delta subunit
LI89_11960	PF02811	PHP domain
LI89_11965	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
LI89_11975	PF03009	Glycerophosphoryl diester phosphodiesterase family
LI89_11985	PF00990	GGDEF domain
LI89_11990	PF00916	LI89_11990
LI89_11990	PF01740	STAS domain
LI89_11995	PF00793	DAHP synthetase I family
LI89_12000	PF13369	LI89_12000
LI89_12000	PF13371	Tetratricopeptide repeat
LI89_12005	PF04247	LI89_12005
LI89_12010	PF13847	Methyltransferase domain
LI89_12015	PF00472	RF-1 domain
LI89_12015	PF03462	PCRF domain
LI89_12020	PF00745	Glutamyl-tRNAGlu reductase, dimerisation domain
LI89_12020	PF01488	Shikimate / quinate 5-dehydrogenase
LI89_12020	PF05201	Glutamyl-tRNAGlu reductase, N-terminal domain
LI89_12025	PF03550	Outer membrane lipoprotein LolB
LI89_12030	PF00288	GHMP kinases N terminal domain
LI89_12030	PF08544	GHMP kinases C terminal
LI89_12035	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
LI89_12035	PF14572	Phosphoribosyl synthetase-associated domain
LI89_12040	PF10762	LI89_12040
LI89_12050	PF01195	Peptidyl-tRNA hydrolase
LI89_12060	PF01926	50S ribosome-binding GTPase
LI89_12060	PF06071	Protein of unknown function (DUF933)
LI89_12065	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
LI89_12065	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
LI89_12070	PF07690	Major Facilitator Superfamily
LI89_12075	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
LI89_12075	PF13378	Enolase C-terminal domain-like
LI89_12080	PF01081	KDPG and KHG aldolase
LI89_12085	PF05035	2-keto-3-deoxy-galactonokinase
LI89_12090	PF00392	Bacterial regulatory proteins, gntR family
LI89_12090	PF07729	FCD domain
LI89_12095	PF00144	Beta-lactamase
LI89_12100	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
LI89_12100	PF03466	LysR substrate binding domain
LI89_12105	PF04391	LI89_12105
LI89_12110	PF00561	alpha/beta hydrolase fold
LI89_12115	PF00959	Phage lysozyme
LI89_12120	PF16080	LI89_12120
LI89_12125	PF10753	LI89_12125
LI89_12130	PF06530	LI89_12130
LI89_12140	PF00132	Bacterial transferase hexapeptide (six repeats)
LI89_12145	PF01381	Helix-turn-helix
LI89_12150	PF00005	ABC transporter
LI89_12165	PF14437	LI89_12165
LI89_12175	PF01527	Transposase
LI89_12180	PF00665	Integrase core domain
LI89_12220	PF00665	Integrase core domain
LI89_12220	PF13936	Helix-turn-helix domain
LI89_12230	PF02413	LI89_12230
LI89_12240	PF11041	LI89_12240
LI89_12245	PF04865	LI89_12245
LI89_12275	PF00959	Phage lysozyme
LI89_12315	PF10709	LI89_12315
LI89_12320	PF05425	LI89_12320
LI89_12325	PF04234	CopC domain
LI89_12330	PF00210	Ferritin-like domain
LI89_12335	PF06440	DNA polymerase III, theta subunit
LI89_12340	PF00561	alpha/beta hydrolase fold
LI89_12350	PF00929	Exonuclease
LI89_12355	PF00326	Prolyl oligopeptidase family
LI89_12355	PF02897	Prolyl oligopeptidase, N-terminal beta-propeller domain
LI89_12360	PF13995	YebF-like protein
LI89_12365	PF04266	ASCH domain
LI89_12370	PF07130	YebG protein
LI89_12375	PF00270	DEAD/DEAH box helicase
LI89_12375	PF00271	Helicase conserved C-terminal domain
LI89_12375	PF03880	DbpA RNA binding domain
LI89_12380	PF02222	ATP-grasp domain
LI89_12385	PF03701	LI89_12385
LI89_12390	PF00425	chorismate binding enzyme
LI89_12390	PF04715	Anthranilate synthase component I, N terminal region
LI89_12395	PF00293	NUDIX domain
LI89_12400	PF03313	LI89_12400
LI89_12400	PF03315	Serine dehydratase beta chain
LI89_12405	PF00571	CBS domain
LI89_12405	PF03471	Transporter associated domain
LI89_12405	PF03741	LI89_12405
LI89_12410	PF03610	PTS system fructose IIA component
LI89_12410	PF03830	PTS system sorbose subfamily IIB component
LI89_12415	PF03609	LI89_12415
LI89_12420	PF03613	LI89_12420
LI89_12425	PF06173	LI89_12425
LI89_12430	PF02659	LI89_12430
LI89_12435	PF00593	TonB dependent receptor
LI89_12435	PF07715	TonB-dependent Receptor Plug Domain
LI89_12440	PF00989	PAS fold
LI89_12440	PF00990	GGDEF domain
LI89_12440	PF08448	PAS fold
LI89_12440	PF13426	PAS domain
LI89_12450	PF13847	Methyltransferase domain
LI89_12455	PF00905	Penicillin binding protein transpeptidase domain
LI89_12455	PF03717	Penicillin-binding Protein dimerisation domain
LI89_12460	PF02578	Multi-copper polyphenol oxidoreductase laccase
LI89_12465	PF00313	'Cold-shock' DNA-binding domain
LI89_12470	PF10736	LI89_12470
LI89_12475	PF07017	Antimicrobial peptide resistance and lipid A acylation protein PagP
LI89_12480	PF00324	Amino acid permease
LI89_12485	PF13269	LI89_12485
LI89_12490	PF10765	Protein of unknown function (DUF2591)
LI89_12495	PF13974	LI89_12495
LI89_12500	PF13996	LI89_12500
LI89_12505	PF10964	LI89_12505
LI89_12515	PF12833	Helix-turn-helix domain
LI89_12530	PF13520	Amino acid permease
LI89_12535	PF00583	Acetyltransferase (GNAT) family
LI89_12540	PF00005	ABC transporter
LI89_12540	PF00664	ABC transporter transmembrane region
LI89_12545	PF01163	RIO1 family
LI89_12550	PF03372	Endonuclease/Exonuclease/phosphatase family
LI89_12555	PF03498	Cytolethal distending toxin A/C family
LI89_12560	PF00990	GGDEF domain
LI89_12560	PF08447	PAS fold
LI89_12560	PF13426	PAS domain
LI89_12570	PF06411	HdeA/HdeB family
LI89_12575	PF07007	Protein of unknown function (DUF1311)
LI89_12580	PF12833	Helix-turn-helix domain
LI89_12585	PF00892	EamA-like transporter family
LI89_12590	PF07690	Major Facilitator Superfamily
LI89_12595	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
LI89_12595	PF13378	Enolase C-terminal domain-like
LI89_12600	PF00392	Bacterial regulatory proteins, gntR family
LI89_12600	PF07729	FCD domain
LI89_12605	PF00107	Zinc-binding dehydrogenase
LI89_12605	PF08240	Alcohol dehydrogenase GroES-like domain
LI89_12610	PF01232	Mannitol dehydrogenase Rossmann domain
LI89_12610	PF08125	Mannitol dehydrogenase C-terminal domain
LI89_12615	PF04295	LI89_12615
LI89_12615	PF08666	SAF domain
LI89_12620	PF00005	ABC transporter
LI89_12625	PF00528	Binding-protein-dependent transport system inner membrane component
LI89_12630	PF00528	Binding-protein-dependent transport system inner membrane component
LI89_12635	PF04952	Succinylglutamate desuccinylase / Aspartoacylase family
LI89_12640	PF00497	Bacterial extracellular solute-binding proteins, family 3
LI89_12650	PF03795	YCII-related domain
LI89_12655	PF01638	HxlR-like helix-turn-helix
LI89_12660	PF05368	NmrA-like family
LI89_12665	PF01053	Cys/Met metabolism PLP-dependent enzyme
LI89_12670	PF02275	Linear amide C-N hydrolases, choloylglycine hydrolase family
LI89_12675	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
LI89_12680	PF04971	LI89_12680
LI89_12685	PF00959	Phage lysozyme
LI89_12700	PF00717	Peptidase S24-like
LI89_12705	PF00817	impB/mucB/samB family
LI89_12705	PF11798	IMS family HHH motif
LI89_12705	PF11799	impB/mucB/samB family C-terminal domain
LI89_12705	PF13438	LI89_12705
LI89_12720	PF00356	Bacterial regulatory proteins, lacI family
LI89_12720	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
LI89_12725	PF00251	Glycosyl hydrolases family 32 N-terminal domain
LI89_12725	PF08244	Glycosyl hydrolases family 32 C terminal
LI89_12730	PF01306	LacY proton/sugar symporter
LI89_12740	PF04932	LI89_12740
LI89_12745	PF00535	Glycosyl transferase family 2
LI89_12760	PF00180	Isocitrate/isopropylmalate dehydrogenase
LI89_12765	PF00849	RNA pseudouridylate synthase
LI89_12770	PF00293	NUDIX domain
LI89_12775	PF03054	tRNA methyl transferase
LI89_12780	PF04356	Protein of unknown function (DUF489)
LI89_12785	PF00206	Lyase
LI89_12785	PF08328	Adenylosuccinate lyase C-terminal
LI89_12790	PF13505	Outer membrane protein beta-barrel domain
LI89_12795	PF00072	Response regulator receiver domain
LI89_12795	PF00486	Transcriptional regulatory protein, C terminal
LI89_12800	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
LI89_12800	PF08918	PhoQ Sensor
LI89_12805	PF08007	Cupin superfamily protein
LI89_12810	PF01546	Peptidase family M20/M25/M40
LI89_12810	PF07687	Peptidase dimerisation domain
LI89_12815	PF02146	Sir2 family
LI89_12820	PF00480	ROK family
LI89_12830	PF02687	LI89_12830
LI89_12830	PF12704	MacB-like periplasmic core domain
LI89_12835	PF00005	ABC transporter
LI89_12840	PF02687	LI89_12840
LI89_12840	PF12704	MacB-like periplasmic core domain
LI89_12845	PF00270	DEAD/DEAH box helicase
LI89_12845	PF00271	Helicase conserved C-terminal domain
LI89_12845	PF02559	CarD-like/TRCF domain
LI89_12845	PF03461	TRCF domain
LI89_12850	PF05433	LI89_12850
LI89_12855	PF07992	Pyridine nucleotide-disulphide oxidoreductase
LI89_12860	PF05728	Uncharacterised protein family (UPF0227)
LI89_12865	PF00933	Glycosyl hydrolase family 3 N terminal domain
LI89_12870	PF01636	Phosphotransferase enzyme family
LI89_12875	PF13036	Protein of unknown function (DUF3897)
LI89_12880	PF07233	Protein of unknown function (DUF1425)
LI89_12885	PF01230	HIT domain
LI89_12890	PF08501	Shikimate dehydrogenase substrate binding domain
LI89_12895	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
LI89_12895	PF12793	LI89_12895
LI89_12900	PF00367	phosphotransferase system, EIIB
LI89_12900	PF02378	Phosphotransferase system, EIIC
LI89_12905	PF01026	TatD related DNase
LI89_12910	PF09115	DNA polymerase III, delta subunit, C terminal
LI89_12910	PF13177	DNA polymerase III, delta subunit
LI89_12915	PF02223	Thymidylate kinase
LI89_12920	PF02618	YceG-like family
LI89_12925	PF01063	Aminotransferase class IV
LI89_12930	PF00109	Beta-ketoacyl synthase, N-terminal domain
LI89_12930	PF02801	Beta-ketoacyl synthase, C-terminal domain
LI89_12935	PF00550	Phosphopantetheine attachment site
LI89_12940	PF13561	Enoyl-(Acyl carrier protein) reductase
LI89_12945	PF00698	Acyl transferase domain
LI89_12950	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
LI89_12950	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
LI89_12955	PF02504	Fatty acid synthesis protein
LI89_12960	PF01783	Ribosomal L32p protein family
LI89_12965	PF02620	LI89_12965
LI89_12970	PF02545	Maf-like protein
LI89_12975	PF00849	RNA pseudouridylate synthase
LI89_12975	PF01479	S4 domain
LI89_12980	PF00575	S1 RNA binding domain
LI89_12980	PF10150	Ribonuclease E/G family
LI89_12980	PF12111	Polyribonucleotide phosphorylase C terminal
LI89_12985	PF03992	Antibiotic biosynthesis monooxygenase
LI89_12990	PF01979	Amidohydrolase family
LI89_12995	PF06183	DinI-like family
LI89_13000	PF13991	LI89_13000
LI89_13005	PF01266	FAD dependent oxidoreductase
LI89_13010	PF00196	Bacterial regulatory proteins, luxR family
LI89_13015	PF01594	LI89_13015
LI89_13020	PF00581	Rhodanese-like domain
LI89_13020	PF12368	LI89_13020
LI89_13030	PF00384	Molybdopterin oxidoreductase
LI89_13030	PF01568	Molydopterin dinucleotide binding domain
LI89_13035	PF03916	LI89_13035
LI89_13040	PF13247	4Fe-4S dicluster domain
LI89_13045	PF00512	His Kinase A (phospho-acceptor) domain
LI89_13045	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
LI89_13045	PF12974	ABC transporter, phosphonate, periplasmic substrate-binding protein
LI89_13050	PF00072	Response regulator receiver domain
LI89_13050	PF00196	Bacterial regulatory proteins, luxR family
LI89_13055	PF03279	LI89_13055
LI89_13060	PF07681	LI89_13060
LI89_13065	PF07690	Major Facilitator Superfamily
LI89_13070	PF00854	POT family
LI89_13080	PF07119	LI89_13080
LI89_13085	PF00535	Glycosyl transferase family 2
LI89_13090	PF04349	Periplasmic glucan biosynthesis protein, MdoG
LI89_13095	PF01757	LI89_13095
LI89_13105	PF00999	Sodium/hydrogen exchanger family
LI89_13105	PF02080	TrkA-C domain
LI89_13105	PF03471	Transporter associated domain
LI89_13110	PF00892	EamA-like transporter family
LI89_13115	PF00765	Autoinducer synthetase
LI89_13120	PF00196	Bacterial regulatory proteins, luxR family
LI89_13120	PF03472	Autoinducer binding domain
LI89_13130	PF03918	Cytochrome C biogenesis protein
LI89_13135	PF08534	Redoxin
LI89_13140	PF01578	LI89_13140
LI89_13140	PF16327	LI89_13140
LI89_13145	PF03916	LI89_13145
LI89_13150	PF12800	4Fe-4S binding domain
LI89_13150	PF13247	4Fe-4S dicluster domain
LI89_13160	PF02335	Cytochrome c552
LI89_13165	PF00884	Sulfatase
LI89_13175	PF04358	DsrC like protein
LI89_13180	PF00708	Acylphosphatase
LI89_13185	PF07784	LI89_13185
LI89_13195	PF10672	S-adenosylmethionine-dependent methyltransferase
LI89_13200	PF08755	Hemimethylated DNA-binding protein YccV like
LI89_13205	PF13380	CoA binding domain
LI89_13210	PF09829	LI89_13210
LI89_13215	PF02142	MGS-like domain
LI89_13220	PF00580	UvrD/REP helicase N-terminal domain
LI89_13220	PF12462	LI89_13220
LI89_13220	PF13361	UvrD-like helicase C-terminal domain
LI89_13225	PF03733	LI89_13225
LI89_13230	PF12805	LI89_13230
LI89_13230	PF13515	LI89_13230
LI89_13235	PF04993	TfoX N-terminal domain
LI89_13235	PF04994	TfoX C-terminal domain
LI89_13240	PF03846	Cell division inhibitor SulA
LI89_13245	PF00691	OmpA family
LI89_13245	PF01389	OmpA-like transmembrane domain
LI89_13250	PF06303	Organiser of macrodomain of Terminus of chromosome
LI89_13250	PF17414	LI89_13250
LI89_13255	PF05362	Lon protease (S16) C-terminal proteolytic domain
LI89_13255	PF13654	AAA domain
LI89_13260	PF07977	FabA-like domain
LI89_13265	PF01638	HxlR-like helix-turn-helix
LI89_13270	PF00109	Beta-ketoacyl synthase, N-terminal domain
LI89_13270	PF02801	Beta-ketoacyl synthase, C-terminal domain
LI89_13275	PF03886	Protein of unknown function (DUF330)
LI89_13280	PF02470	LI89_13280
LI89_13285	PF04403	LI89_13285
LI89_13290	PF00005	ABC transporter
LI89_13290	PF12848	ABC transporter
LI89_13290	PF16326	LI89_13290
LI89_13295	PF01170	Putative RNA methylase family UPF0020
LI89_13295	PF02926	THUMP domain
LI89_13295	PF10672	S-adenosylmethionine-dependent methyltransferase
LI89_13300	PF00111	2Fe-2S iron-sulfur cluster binding domain
LI89_13300	PF03473	MOSC domain
LI89_13300	PF03476	MOSC N-terminal beta barrel domain
LI89_13305	PF07126	LI89_13305
LI89_13310	PF01180	Dihydroorotate dehydrogenase
LI89_13315	PF01433	Peptidase family M1
LI89_13315	PF11940	Domain of unknown function (DUF3458)
LI89_13315	PF17432	LI89_13315
LI89_13320	PF04095	Nicotinate phosphoribosyltransferase (NAPRTase) family
LI89_13325	PF00152	tRNA synthetases class II (D, K and N)
LI89_13325	PF01336	OB-fold nucleic acid binding domain
LI89_13330	PF00267	Gram-negative porin
LI89_13335	PF00155	Aminotransferase class I and II
LI89_13340	PF00563	EAL domain
LI89_13340	PF12792	LI89_13340
LI89_13345	PF00753	Metallo-beta-lactamase superfamily
LI89_13350	PF05951	LI89_13350
LI89_13355	PF01471	Putative peptidoglycan binding domain
LI89_13355	PF03734	L,D-transpeptidase catalytic domain
LI89_13360	PF04310	MukB N-terminal
LI89_13360	PF13558	Putative exonuclease SbcCD, C subunit
LI89_13360	PF16330	LI89_13360
LI89_13365	PF04288	MukE-like family
LI89_13370	PF03882	KicB killing factor
LI89_13370	PF17192	LI89_13370
LI89_13370	PF17193	LI89_13370
LI89_13375	PF13847	Methyltransferase domain
LI89_13380	PF02698	DUF218 domain
LI89_13385	PF03881	Fructosamine kinase
LI89_13390	PF02348	Cytidylyltransferase
LI89_13395	PF03966	Trm112p-like protein
LI89_13400	PF00313	'Cold-shock' DNA-binding domain
LI89_13405	PF00313	'Cold-shock' DNA-binding domain
LI89_13410	PF07063	Domain of unknown function (DUF1338)
LI89_13415	PF02606	Tetraacyldisaccharide-1-P 4'-kinase
LI89_13420	PF00005	ABC transporter
LI89_13420	PF00664	ABC transporter transmembrane region
LI89_13425	PF00753	Metallo-beta-lactamase superfamily
LI89_13425	PF03772	LI89_13425
LI89_13425	PF13567	LI89_13425
LI89_13430	PF00216	Bacterial DNA-binding protein
LI89_13435	PF00575	S1 RNA binding domain
LI89_13440	PF02224	Cytidylate kinase
LI89_13445	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
LI89_13450	PF00266	Aminotransferase class-V
LI89_13455	PF04239	Protein of unknown function (DUF421)
LI89_13460	PF00710	Asparaginase
LI89_13465	PF02624	YcaO-like family
LI89_13470	PF01226	Formate/nitrite transporter
LI89_13475	PF01228	Glycine radical
LI89_13475	PF02901	Pyruvate formate lyase
LI89_13480	PF04055	Radical SAM superfamily
LI89_13480	PF13353	4Fe-4S single cluster domain
LI89_13485	PF07690	Major Facilitator Superfamily
LI89_13490	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
LI89_13490	PF02403	Seryl-tRNA synthetase N-terminal domain
LI89_13495	PF00004	ATPase family associated with various cellular activities (AAA)
LI89_13495	PF12002	MgsA AAA+ ATPase C terminal
LI89_13495	PF16193	LI89_13495
LI89_13500	PF03548	Outer membrane lipoprotein carrier protein LolA
LI89_13505	PF01580	FtsK/SpoIIIE family
LI89_13505	PF09397	Ftsk gamma domain
LI89_13505	PF13491	LI89_13505
LI89_13510	PF01037	AsnC family
LI89_13510	PF13412	Winged helix-turn-helix DNA-binding
LI89_13515	PF07992	Pyridine nucleotide-disulphide oxidoreductase
LI89_13520	PF00005	ABC transporter
LI89_13520	PF00664	ABC transporter transmembrane region
LI89_13525	PF00005	ABC transporter
LI89_13525	PF00664	ABC transporter transmembrane region
LI89_13530	PF03588	Leucyl/phenylalanyl-tRNA protein transferase
LI89_13535	PF01176	Translation initiation factor 1A / IF-1
LI89_13540	PF00004	ATPase family associated with various cellular activities (AAA)
LI89_13540	PF02861	Clp amino terminal domain
LI89_13540	PF07724	AAA domain (Cdc48 subfamily)
LI89_13540	PF10431	C-terminal, D2-small domain, of ClpB protein
LI89_13545	PF02617	ATP-dependent Clp protease adaptor protein ClpS
LI89_13550	PF00313	'Cold-shock' DNA-binding domain
LI89_13555	PF00005	ABC transporter
LI89_13555	PF02687	LI89_13555
LI89_13555	PF12704	MacB-like periplasmic core domain
LI89_13560	PF16576	LI89_13560
LI89_13565	PF04393	LI89_13565
LI89_13570	PF11398	Protein of unknown function (DUF2813)
LI89_13575	PF03956	LI89_13575
LI89_13580	PF03063	Prismane/CO dehydrogenase family
LI89_13585	PF00111	2Fe-2S iron-sulfur cluster binding domain
LI89_13585	PF00175	Oxidoreductase NAD-binding domain
LI89_13585	PF00970	Oxidoreductase FAD-binding domain
LI89_13590	PF00205	Thiamine pyrophosphate enzyme, central domain
LI89_13590	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
LI89_13590	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
LI89_13595	PF04072	Leucine carboxyl methyltransferase
LI89_13600	PF01212	Beta-eliminating lyase
LI89_13605	PF11066	LI89_13605
LI89_13605	PF13460	NADH(P)-binding
LI89_13610	PF01370	NAD dependent epimerase/dehydratase family
LI89_13615	PF12883	Protein of unknown function (DUF3828)
LI89_13620	PF00005	ABC transporter
LI89_13625	PF00497	Bacterial extracellular solute-binding proteins, family 3
LI89_13630	PF00528	Binding-protein-dependent transport system inner membrane component
LI89_13635	PF00528	Binding-protein-dependent transport system inner membrane component
LI89_13650	PF00497	Bacterial extracellular solute-binding proteins, family 3
LI89_13655	PF05958	tRNA (Uracil-5-)-methyltransferase
LI89_13660	PF10767	LI89_13660
LI89_13665	PF00528	Binding-protein-dependent transport system inner membrane component
LI89_13670	PF00528	Binding-protein-dependent transport system inner membrane component
LI89_13675	PF00005	ABC transporter
LI89_13675	PF08402	TOBE domain
LI89_13680	PF13416	Bacterial extracellular solute-binding protein
LI89_13685	PF10722	Putative bacterial sensory transduction regulator
LI89_13690	PF07214	LI89_13690
LI89_13695	PF00462	Glutaredoxin
LI89_13700	PF02080	TrkA-C domain
LI89_13700	PF06826	LI89_13700
LI89_13705	PF01569	PAP2 superfamily
LI89_13710	PF01569	PAP2 superfamily
LI89_13715	PF01791	DeoC/LacD family aldolase
LI89_13720	PF00455	LI89_13720
LI89_13720	PF08220	DeoR-like helix-turn-helix domain
LI89_13725	PF03222	Tryptophan/tyrosine permease family
LI89_13730	PF03313	LI89_13730
LI89_13730	PF03315	Serine dehydratase beta chain
LI89_13735	PF00768	D-alanyl-D-alanine carboxypeptidase
LI89_13735	PF07943	Penicillin-binding protein 5, C-terminal domain
LI89_13740	PF00291	Pyridoxal-phosphate dependent enzyme
LI89_13740	PF00571	CBS domain
LI89_13745	PF01053	Cys/Met metabolism PLP-dependent enzyme
LI89_13750	PF01381	Helix-turn-helix
LI89_13760	PF00528	Binding-protein-dependent transport system inner membrane component
LI89_13765	PF00005	ABC transporter
LI89_13765	PF09383	NIL domain
LI89_13770	PF03180	NLPA lipoprotein
LI89_13775	PF03171	2OG-Fe(II) oxygenase superfamily
LI89_13775	PF14226	non-haem dioxygenase in morphine synthesis N-terminal
LI89_13780	PF12710	haloacid dehalogenase-like hydrolase
LI89_13785	PF00043	Glutathione S-transferase, C-terminal domain
LI89_13785	PF02798	Glutathione S-transferase, N-terminal domain
LI89_13790	PF00593	TonB dependent receptor
LI89_13790	PF07715	TonB-dependent Receptor Plug Domain
LI89_13795	PF00005	ABC transporter
LI89_13800	PF01032	FecCD transport family
LI89_13805	PF00324	Amino acid permease
LI89_13810	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
LI89_13810	PF03466	LysR substrate binding domain
LI89_13820	PF03601	LI89_13820
LI89_13825	PF01261	Xylose isomerase-like TIM barrel
LI89_13830	PF00577	Outer membrane usher protein
LI89_13830	PF13953	PapC C-terminal domain
LI89_13830	PF13954	PapC N-terminal domain
LI89_13835	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
LI89_13835	PF02753	Pili assembly chaperone PapD, C-terminal domain
LI89_13845	PF17550	LI89_13845
LI89_13850	PF00486	Transcriptional regulatory protein, C terminal
LI89_13855	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
LI89_13855	PF02378	Phosphotransferase system, EIIC
LI89_13860	PF00294	pfkB family carbohydrate kinase
LI89_13865	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
LI89_13865	PF00381	PTS HPr component phosphorylation site
LI89_13870	PF00293	NUDIX domain
LI89_13875	PF03264	NapC/NirT cytochrome c family, N-terminal region
LI89_13880	PF00384	Molybdopterin oxidoreductase
LI89_13880	PF01568	Molydopterin dinucleotide binding domain
LI89_13885	PF03692	LI89_13885
LI89_13890	PF03222	Tryptophan/tyrosine permease family
LI89_13895	PF01132	Elongation factor P (EF-P) OB domain
LI89_13895	PF08207	Elongation factor P (EF-P) KOW-like domain
LI89_13895	PF09285	Elongation factor P, C-terminal
LI89_13900	PF03786	D-mannonate dehydratase (UxuA)
LI89_13910	PF01232	Mannitol dehydrogenase Rossmann domain
LI89_13910	PF08125	Mannitol dehydrogenase C-terminal domain
LI89_13915	PF00392	Bacterial regulatory proteins, gntR family
LI89_13915	PF07729	FCD domain
LI89_13925	PF02492	CobW/HypB/UreG, nucleotide-binding domain
LI89_13925	PF07683	Cobalamin synthesis protein cobW C-terminal domain
LI89_13930	PF01569	PAP2 superfamily
LI89_13935	PF00877	NlpC/P60 family
LI89_13945	PF00563	EAL domain
LI89_13945	PF12792	LI89_13945
LI89_13950	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
LI89_13955	PF00528	Binding-protein-dependent transport system inner membrane component
LI89_13960	PF00528	Binding-protein-dependent transport system inner membrane component
LI89_13960	PF12911	LI89_13960
LI89_13965	PF00005	ABC transporter
LI89_13965	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
LI89_13970	PF13989	LI89_13970
LI89_13975	PF07690	Major Facilitator Superfamily
LI89_13980	PF00849	RNA pseudouridylate synthase
LI89_13980	PF01479	S4 domain
LI89_13985	PF00271	Helicase conserved C-terminal domain
LI89_13985	PF04851	Type III restriction enzyme, res subunit
LI89_13990	PF01386	Ribosomal L25p family
LI89_13995	PF04245	LI89_13995
LI89_14000	PF07208	Protein of unknown function (DUF1414)
LI89_14005	PF00884	Sulfatase
LI89_14005	PF11893	LI89_14005
LI89_14015	PF00891	O-methyltransferase
LI89_14020	PF00194	Eukaryotic-type carbonic anhydrase
LI89_14025	PF00232	Glycosyl hydrolase family 1
LI89_14030	PF00367	phosphotransferase system, EIIB
LI89_14030	PF02378	Phosphotransferase system, EIIC
LI89_14035	PF01380	SIS domain
LI89_14035	PF01418	Helix-turn-helix domain, rpiR family
LI89_14045	PF10076	LI89_14045
LI89_14050	PF00717	Peptidase S24-like
LI89_14050	PF01381	Helix-turn-helix
LI89_14055	PF06183	DinI-like family
LI89_14060	PF01278	Omptin family
LI89_14065	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
LI89_14065	PF00672	HAMP domain
LI89_14065	PF02743	Cache domain
LI89_14070	PF12706	Beta-lactamase superfamily domain
LI89_14075	PF13347	MFS/sugar transport protein
LI89_14080	PF00144	Beta-lactamase
LI89_14100	PF00267	Gram-negative porin
LI89_14105	PF13437	HlyD family secretion protein
LI89_14105	PF13533	Biotin-lipoyl like
LI89_14110	PF00005	ABC transporter
LI89_14110	PF00664	ABC transporter transmembrane region
LI89_14115	PF02321	Outer membrane efflux protein
LI89_14120	PF12245	Bacterial Ig-like domain (group 3)
LI89_14125	PF07690	Major Facilitator Superfamily
LI89_14130	PF01627	Hpt domain
LI89_14130	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
LI89_14130	PF16359	LI89_14130
LI89_14135	PF00072	Response regulator receiver domain
LI89_14135	PF00196	Bacterial regulatory proteins, luxR family
LI89_14140	PF00072	Response regulator receiver domain
LI89_14140	PF00512	His Kinase A (phospho-acceptor) domain
LI89_14140	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
LI89_14140	PF09456	RcsC Alpha-Beta-Loop (ABL)
LI89_14145	PF00521	DNA gyrase/topoisomerase IV, subunit A
LI89_14145	PF03989	DNA gyrase C-terminal domain, beta-propeller
LI89_14150	PF13489	Methyltransferase domain
LI89_14155	PF00317	Ribonucleotide reductase, all-alpha domain
LI89_14155	PF02867	Ribonucleotide reductase, barrel domain
LI89_14155	PF03477	ATP cone domain
LI89_14160	PF00268	Ribonucleotide reductase, small chain
LI89_14165	PF00111	2Fe-2S iron-sulfur cluster binding domain
LI89_14170	PF03974	Ecotin
LI89_14175	PF00082	Subtilase family
LI89_14175	PF01483	Proprotein convertase P-domain
LI89_14175	PF08548	Peptidase M10 serralysin C terminal
LI89_14185	PF00994	Probable molybdopterin binding domain
LI89_14190	PF03222	Tryptophan/tyrosine permease family
LI89_14195	PF07437	LI89_14195
LI89_14200	PF00199	Catalase
LI89_14200	PF06628	Catalase-related immune-responsive
LI89_14210	PF00501	AMP-binding enzyme
LI89_14210	PF13193	AMP-binding enzyme C-terminal domain
LI89_14215	PF13378	Enolase C-terminal domain-like
LI89_14220	PF00378	Enoyl-CoA hydratase/isomerase family
LI89_14225	PF12697	Alpha/beta hydrolase family
LI89_14230	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
LI89_14230	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
LI89_14230	PF16582	LI89_14230
LI89_14235	PF00425	chorismate binding enzyme
LI89_14240	PF05957	LI89_14240
LI89_14245	PF00920	Dehydratase family
LI89_14250	PF03928	Domain of unknown function (DUF336)
LI89_14255	PF07690	Major Facilitator Superfamily
LI89_14260	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
LI89_14260	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
LI89_14265	PF00356	Bacterial regulatory proteins, lacI family
LI89_14265	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
LI89_14270	PF00106	short chain dehydrogenase
LI89_14275	PF01202	Shikimate kinase
LI89_14280	PF04074	Domain of unknown function (DUF386)
LI89_14295	PF06496	LI89_14295
LI89_14305	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
LI89_14310	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
LI89_14315	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
LI89_14315	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
LI89_14320	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
LI89_14325	PF00499	NADH-ubiquinone/plastoquinone oxidoreductase chain 6
LI89_14330	PF12838	4Fe-4S dicluster domain
LI89_14335	PF00146	NADH dehydrogenase
LI89_14340	PF00384	Molybdopterin oxidoreductase
LI89_14340	PF01568	Molydopterin dinucleotide binding domain
LI89_14340	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
LI89_14340	PF10588	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
LI89_14340	PF13510	2Fe-2S iron-sulfur cluster binding domain
LI89_14345	PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit
LI89_14345	PF10589	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
LI89_14350	PF01257	Thioredoxin-like [2Fe-2S] ferredoxin
LI89_14355	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
LI89_14355	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
LI89_14360	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
LI89_14365	PF00507	NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
LI89_14370	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
LI89_14370	PF03466	LysR substrate binding domain
LI89_14380	PF00155	Aminotransferase class I and II
LI89_14390	PF13023	HD domain
LI89_14395	PF02080	TrkA-C domain
LI89_14395	PF03600	Citrate transporter
LI89_14405	PF13419	Haloacid dehalogenase-like hydrolase
LI89_14410	PF03887	YfbU domain
LI89_14415	PF04217	LI89_14415
LI89_14420	PF00871	Acetokinase family
LI89_14425	PF01515	Phosphate acetyl/butaryl transferase
LI89_14425	PF07085	DRTGG domain
LI89_14425	PF13500	AAA domain
LI89_14430	PF00356	Bacterial regulatory proteins, lacI family
LI89_14430	PF13377	Periplasmic binding protein-like domain
LI89_14435	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
LI89_14440	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
LI89_14445	PF03611	LI89_14445
LI89_14450	PF00293	NUDIX domain
LI89_14455	PF12850	Calcineurin-like phosphoesterase superfamily domain
LI89_14460	PF00563	EAL domain
LI89_14465	PF01370	NAD dependent epimerase/dehydratase family
LI89_14465	PF08338	Domain of unknown function (DUF1731)
LI89_14470	PF00005	ABC transporter
LI89_14475	PF00528	Binding-protein-dependent transport system inner membrane component
LI89_14480	PF00528	Binding-protein-dependent transport system inner membrane component
LI89_14485	PF00497	Bacterial extracellular solute-binding proteins, family 3
LI89_14495	PF02441	Flavoprotein
LI89_14500	PF00156	Phosphoribosyl transferase domain
LI89_14500	PF13522	Glutamine amidotransferase domain
LI89_14505	PF02674	LI89_14505
LI89_14510	PF05036	Sporulation related domain
LI89_14515	PF02875	Mur ligase family, glutamate ligase domain
LI89_14515	PF08245	Mur ligase middle domain
LI89_14525	PF01039	Carboxyl transferase domain
LI89_14530	PF09335	LI89_14530
LI89_14535	PF01416	tRNA pseudouridine synthase
LI89_14540	PF01118	Semialdehyde dehydrogenase, NAD binding domain
LI89_14540	PF02774	Semialdehyde dehydrogenase, dimerisation domain
LI89_14545	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
LI89_14545	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
LI89_14545	PF11890	Domain of unknown function (DUF3410)
LI89_14550	PF07883	Cupin domain
LI89_14550	PF12833	Helix-turn-helix domain
LI89_14555	PF00892	EamA-like transporter family
LI89_14560	PF00892	EamA-like transporter family
LI89_14570	PF00155	Aminotransferase class I and II
LI89_14570	PF00392	Bacterial regulatory proteins, gntR family
LI89_14575	PF00578	AhpC/TSA family
LI89_14580	PF13462	Thioredoxin
LI89_14585	PF02683	LI89_14585
LI89_14585	PF11412	Disulphide bond corrector protein DsbC
LI89_14585	PF13899	Thioredoxin-like
LI89_14600	PF03600	Citrate transporter
LI89_14605	PF00328	Histidine phosphatase superfamily (branch 2)
LI89_14610	PF00356	Bacterial regulatory proteins, lacI family
LI89_14610	PF13377	Periplasmic binding protein-like domain
LI89_14615	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
LI89_14620	PF02378	Phosphotransferase system, EIIC
LI89_14625	PF00232	Glycosyl hydrolase family 1
LI89_14630	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit
LI89_14635	PF02264	LamB porin
LI89_14640	PF01177	Asp/Glu/Hydantoin racemase
LI89_14645	PF00990	GGDEF domain
LI89_14645	PF08447	PAS fold
LI89_14650	PF00109	Beta-ketoacyl synthase, N-terminal domain
LI89_14650	PF02801	Beta-ketoacyl synthase, C-terminal domain
LI89_14655	PF01266	FAD dependent oxidoreductase
LI89_14655	PF05430	S-adenosyl-L-methionine-dependent methyltransferase
LI89_14660	PF08891	LI89_14660
LI89_14665	PF04315	LI89_14665
LI89_14670	PF01925	LI89_14670
LI89_14675	PF03411	Penicillin-insensitive murein endopeptidase
LI89_14680	PF01264	Chorismate synthase
LI89_14685	PF05175	Methyltransferase small domain
LI89_14695	PF01713	Smr domain
LI89_14700	PF00300	Histidine phosphatase superfamily (branch 1)
LI89_14705	PF00378	Enoyl-CoA hydratase/isomerase family
LI89_14705	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
LI89_14705	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
LI89_14710	PF00108	Thiolase, N-terminal domain
LI89_14710	PF02803	Thiolase, C-terminal domain
LI89_14715	PF04175	Protein of unknown function (DUF406)
LI89_14720	PF03349	Outer membrane protein transport protein (OMPP1/FadL/TodX)
LI89_14725	PF02452	PemK-like protein
LI89_14735	PF04333	LI89_14735
LI89_14740	PF14559	Tetratricopeptide repeat
LI89_14745	PF03918	Cytochrome C biogenesis protein
LI89_14750	PF08534	Redoxin
LI89_14755	PF01578	LI89_14755
LI89_14755	PF16327	LI89_14755
LI89_14760	PF03100	CcmE
LI89_14765	PF04995	LI89_14765
LI89_14770	PF01578	LI89_14770
LI89_14780	PF03379	LI89_14780
LI89_14785	PF00005	ABC transporter
LI89_14790	PF01226	Formate/nitrite transporter
LI89_14800	PF07338	Protein of unknown function (DUF1471)
LI89_14805	PF12698	ABC-2 family transporter protein
LI89_14810	PF12698	ABC-2 family transporter protein
LI89_14815	PF16576	LI89_14815
LI89_14820	PF00267	Gram-negative porin
LI89_14830	PF01965	DJ-1/PfpI family
LI89_14830	PF12833	Helix-turn-helix domain
LI89_14835	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
LI89_14835	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
LI89_14840	PF00196	Bacterial regulatory proteins, luxR family
LI89_14850	PF00577	Outer membrane usher protein
LI89_14850	PF13953	PapC C-terminal domain
LI89_14850	PF13954	PapC N-terminal domain
LI89_14855	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
LI89_14855	PF02753	Pili assembly chaperone PapD, C-terminal domain
LI89_14860	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
LI89_14860	PF02753	Pili assembly chaperone PapD, C-terminal domain
LI89_14865	PF00419	Fimbrial protein
LI89_14870	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
LI89_14870	PF02753	Pili assembly chaperone PapD, C-terminal domain
LI89_14875	PF00419	Fimbrial protein
LI89_14880	PF03865	Haemolysin secretion/activation protein ShlB/FhaC/HecB
LI89_14880	PF08479	POTRA domain, ShlB-type
LI89_14880	PF17287	LI89_14880
LI89_14905	PF10004	LI89_14905
LI89_14910	PF08845	LI89_14910
LI89_14925	PF13332	LI89_14925
LI89_15000	PF03831	PhnA protein
LI89_15000	PF08274	PhnA Zinc-Ribbon
LI89_15005	PF03551	Transcriptional regulator PadR-like family
LI89_15010	PF12977	Domain of Unknown Function with PDB structure (DUF3861)
LI89_15015	PF00232	Glycosyl hydrolase family 1
LI89_15020	PF00367	phosphotransferase system, EIIB
LI89_15020	PF02378	Phosphotransferase system, EIIC
LI89_15025	PF00356	Bacterial regulatory proteins, lacI family
LI89_15025	PF13377	Periplasmic binding protein-like domain
LI89_15030	PF04264	YceI-like domain
LI89_15035	PF01292	Prokaryotic cytochrome b561
LI89_15040	PF07859	alpha/beta hydrolase fold
LI89_15045	PF13411	MerR HTH family regulatory protein
LI89_15050	PF03886	Protein of unknown function (DUF330)
LI89_15055	PF02470	LI89_15055
LI89_15060	PF00005	ABC transporter
LI89_15065	PF02405	LI89_15065
LI89_15070	PF07690	Major Facilitator Superfamily
LI89_15075	PF00440	Bacterial regulatory proteins, tetR family
LI89_15075	PF13977	Bacterial transcriptional repressor
LI89_15080	PF07969	Amidohydrolase family
LI89_15085	PF00324	Amino acid permease
LI89_15090	PF13406	Transglycosylase SLT domain
LI89_15095	PF13343	Bacterial extracellular solute-binding protein
LI89_15100	PF00528	Binding-protein-dependent transport system inner membrane component
LI89_15105	PF00005	ABC transporter
LI89_15110	PF01810	LI89_15110
LI89_15115	PF09900	LI89_15115
LI89_15120	PF00232	Glycosyl hydrolase family 1
LI89_15125	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
LI89_15125	PF00367	phosphotransferase system, EIIB
LI89_15125	PF02378	Phosphotransferase system, EIIC
LI89_15130	PF00874	PRD domain
LI89_15130	PF03123	CAT RNA binding domain
LI89_15140	PF15970	LI89_15140
LI89_15145	PF01292	Prokaryotic cytochrome b561
LI89_15150	PF00155	Aminotransferase class I and II
LI89_15155	PF13302	Acetyltransferase (GNAT) domain
LI89_15160	PF07350	Protein of unknown function (DUF1479)
LI89_15165	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
LI89_15165	PF06580	LI89_15165
LI89_15165	PF07694	5TMR of 5TMR-LYT
LI89_15170	PF00072	Response regulator receiver domain
LI89_15170	PF04397	LytTr DNA-binding domain
LI89_15175	PF07690	Major Facilitator Superfamily
LI89_15180	PF02685	Glucokinase
LI89_15185	PF05232	LI89_15185
LI89_15190	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
LI89_15190	PF03466	LysR substrate binding domain
LI89_15195	PF00205	Thiamine pyrophosphate enzyme, central domain
LI89_15195	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
LI89_15195	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
LI89_15200	PF00248	Aldo/keto reductase family
LI89_15205	PF10697	LI89_15205
LI89_15210	PF01566	LI89_15210
LI89_15215	PF01773	Na+ dependent nucleoside transporter N-terminus
LI89_15215	PF07662	Na+ dependent nucleoside transporter C-terminus
LI89_15215	PF07670	Nucleoside recognition
LI89_15240	PF00749	tRNA synthetases class I (E and Q), catalytic domain
LI89_15260	PF06042	Bacterial protein of unknown function (DUF925)
LI89_15265	PF14282	LI89_15265
LI89_15270	PF12843	LI89_15270
LI89_15275	PF00533	BRCA1 C Terminus (BRCT) domain
LI89_15275	PF01653	NAD-dependent DNA ligase adenylation domain
LI89_15275	PF03119	NAD-dependent DNA ligase C4 zinc finger domain
LI89_15275	PF03120	NAD-dependent DNA ligase OB-fold domain
LI89_15275	PF12826	Helix-hairpin-helix motif
LI89_15275	PF14520	Helix-hairpin-helix domain
LI89_15280	PF04354	ZipA, C-terminal FtsZ-binding domain
LI89_15285	PF07264	Etoposide-induced protein 2
LI89_15290	PF00291	Pyridoxal-phosphate dependent enzyme
LI89_15295	PF00381	PTS HPr component phosphorylation site
LI89_15300	PF00391	PEP-utilising enzyme, mobile domain
LI89_15300	PF02896	PEP-utilising enzyme, TIM barrel domain
LI89_15300	PF05524	PEP-utilising enzyme, N-terminal
LI89_15305	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
LI89_15310	PF00512	His Kinase A (phospho-acceptor) domain
LI89_15310	PF00672	HAMP domain
LI89_15310	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
LI89_15315	PF00072	Response regulator receiver domain
LI89_15315	PF00486	Transcriptional regulatory protein, C terminal
LI89_15320	PF16576	LI89_15320
LI89_15325	PF00005	ABC transporter
LI89_15325	PF02687	LI89_15325
LI89_15325	PF12704	MacB-like periplasmic core domain
LI89_15330	PF00291	Pyridoxal-phosphate dependent enzyme
LI89_15335	PF00005	ABC transporter
LI89_15340	PF00528	Binding-protein-dependent transport system inner membrane component
LI89_15345	PF00528	Binding-protein-dependent transport system inner membrane component
LI89_15350	PF13531	Bacterial extracellular solute-binding protein
LI89_15355	PF07690	Major Facilitator Superfamily
LI89_15360	PF01380	SIS domain
LI89_15360	PF01418	Helix-turn-helix domain, rpiR family
LI89_15365	PF04074	Domain of unknown function (DUF386)
LI89_15370	PF00480	ROK family
LI89_15375	PF04131	Putative N-acetylmannosamine-6-phosphate epimerase
LI89_15380	PF00701	Dihydrodipicolinate synthetase family
LI89_15385	PF04261	Dyp-type peroxidase family
LI89_15390	PF06572	Protein of unknown function (DUF1131)
LI89_15400	PF04076	Bacterial OB fold (BOF) protein
LI89_15410	PF00583	Acetyltransferase (GNAT) family
LI89_15415	PF01218	Coproporphyrinogen III oxidase
LI89_15420	PF02639	LI89_15420
LI89_15425	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
LI89_15430	PF00196	Bacterial regulatory proteins, luxR family
LI89_15435	PF00390	Malic enzyme, N-terminal domain
LI89_15435	PF01515	Phosphate acetyl/butaryl transferase
LI89_15435	PF03949	Malic enzyme, NAD binding domain
LI89_15445	PF00293	NUDIX domain
LI89_15450	PF03264	NapC/NirT cytochrome c family, N-terminal region
LI89_15455	PF03892	Nitrate reductase cytochrome c-type subunit (NapB)
LI89_15460	PF00384	Molybdopterin oxidoreductase
LI89_15460	PF01568	Molydopterin dinucleotide binding domain
LI89_15460	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
LI89_15460	PF10518	TAT (twin-arginine translocation) pathway signal sequence
LI89_15465	PF03927	NapD protein
LI89_15470	PF12838	4Fe-4S dicluster domain
LI89_15470	PF13187	4Fe-4S dicluster domain
LI89_15475	PF00072	Response regulator receiver domain
LI89_15475	PF00196	Bacterial regulatory proteins, luxR family
LI89_15480	PF09904	Winged helix-turn helix
LI89_15485	PF00873	AcrB/AcrD/AcrF family
LI89_15495	PF02624	YcaO-like family
LI89_15500	PF12688	Tetratrico peptide repeat
LI89_15500	PF13174	Tetratricopeptide repeat
LI89_15510	PF09954	LI89_15510
LI89_15515	PF05175	Methyltransferase small domain
LI89_15520	PF07693	LI89_15520
LI89_15550	PF00959	Phage lysozyme
LI89_15560	PF00041	Fibronectin type III domain
LI89_15560	PF12421	LI89_15560
LI89_15560	PF13550	LI89_15560
LI89_15595	PF08813	LI89_15595
LI89_15615	PF04586	LI89_15615
LI89_15615	PF05065	Phage capsid family
LI89_15630	PF05876	LI89_15630
LI89_15645	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)
LI89_15680	PF00239	Resolvase, N terminal domain
LI89_15680	PF07508	Recombinase
LI89_15680	PF13408	Recombinase zinc beta ribbon domain
LI89_15685	PF03960	ArsC family
LI89_15690	PF01546	Peptidase family M20/M25/M40
LI89_15690	PF07687	Peptidase dimerisation domain
LI89_15695	PF02557	D-alanyl-D-alanine carboxypeptidase
LI89_15700	PF13980	LI89_15700
LI89_15705	PF02230	Phospholipase/Carboxylesterase
LI89_15710	PF05127	Helicase
LI89_15710	PF08351	Domain of unknown function (DUF1726)
LI89_15710	PF13718	GNAT acetyltransferase 2
LI89_15710	PF17176	LI89_15710
LI89_15715	PF04284	LI89_15715
LI89_15720	PF04228	LI89_15720
LI89_15725	PF01259	SAICAR synthetase
LI89_15730	PF06804	NlpB/DapX lipoprotein
LI89_15735	PF00701	Dihydrodipicolinate synthetase family
LI89_15740	PF13740	ACT domain
LI89_15745	PF00578	AhpC/TSA family
LI89_15750	PF01594	LI89_15750
LI89_15755	PF01435	Peptidase family M48
LI89_15755	PF14559	Tetratricopeptide repeat
LI89_15760	PF03960	ArsC family
LI89_15765	PF00308	Bacterial dnaA  protein
LI89_15770	PF00860	Permease family
LI89_15775	PF14681	Uracil phosphoribosyltransferase
LI89_15780	PF00586	AIR synthase related protein, N-terminal domain
LI89_15780	PF02769	AIR synthase related protein, C-terminal domain
LI89_15785	PF00551	Formyl transferase
LI89_15790	PF13302	Acetyltransferase (GNAT) domain
LI89_15795	PF03692	LI89_15795
LI89_15800	PF03692	LI89_15800
LI89_15805	PF00005	ABC transporter
LI89_15810	PF00528	Binding-protein-dependent transport system inner membrane component
LI89_15815	PF00528	Binding-protein-dependent transport system inner membrane component
LI89_15820	PF02503	Polyphosphate kinase middle domain
LI89_15820	PF13089	Polyphosphate kinase N-terminal domain
LI89_15820	PF13090	Polyphosphate kinase C-terminal domain
LI89_15825	PF02541	Ppx/GppA phosphatase family
LI89_15830	PF11119	LI89_15830
LI89_15835	PF00571	CBS domain
LI89_15835	PF01769	Divalent cation transporter
LI89_15835	PF03448	MgtE intracellular N domain
LI89_15840	PF00563	EAL domain
LI89_15840	PF00990	GGDEF domain
LI89_15840	PF05231	LI89_15840
LI89_15840	PF08447	PAS fold
LI89_15840	PF08448	PAS fold
LI89_15845	PF00012	Hsp70 protein
LI89_15850	PF13437	HlyD family secretion protein
LI89_15850	PF13533	Biotin-lipoyl like
LI89_15855	PF00873	AcrB/AcrD/AcrF family
LI89_15860	PF00873	AcrB/AcrD/AcrF family
LI89_15870	PF07690	Major Facilitator Superfamily
LI89_15875	PF00512	His Kinase A (phospho-acceptor) domain
LI89_15875	PF00672	HAMP domain
LI89_15875	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
LI89_15880	PF00072	Response regulator receiver domain
LI89_15880	PF00486	Transcriptional regulatory protein, C terminal
LI89_15885	PF07411	Domain of unknown function (DUF1508)
LI89_15890	PF01381	Helix-turn-helix
LI89_15895	PF07804	HipA-like C-terminal domain
LI89_15900	PF01136	LI89_15900
LI89_15900	PF16325	LI89_15900
LI89_15905	PF00781	Diacylglycerol kinase catalytic domain
LI89_15910	PF03608	LI89_15910
LI89_15915	PF03612	LI89_15915
LI89_15915	PF07663	LI89_15915
LI89_15920	PF03829	PTS system glucitol/sorbitol-specific IIA component
LI89_15925	PF00106	short chain dehydrogenase
LI89_15930	PF06923	LI89_15930
LI89_15935	PF00455	LI89_15935
LI89_15935	PF08220	DeoR-like helix-turn-helix domain
LI89_15940	PF00571	CBS domain
LI89_15940	PF01380	SIS domain
LI89_15945	PF08816	Inhibitor of vertebrate lysozyme (Ivy)
LI89_15955	PF08543	Phosphomethylpyrimidine kinase
LI89_15960	PF13673	Acetyltransferase (GNAT) domain
LI89_15970	PF00034	Cytochrome c
LI89_15970	PF13442	Cytochrome C oxidase, cbb3-type, subunit III
LI89_15975	PF00890	FAD binding domain
LI89_15975	PF05199	GMC oxidoreductase
LI89_15980	PF12318	LI89_15980
LI89_15990	PF00117	Glutamine amidotransferase class-I
LI89_15990	PF00958	GMP synthase C terminal domain
LI89_15990	PF02540	NAD synthase
LI89_15995	PF00478	IMP dehydrogenase / GMP reductase domain
LI89_15995	PF00571	CBS domain
LI89_16000	PF02601	LI89_16000
LI89_16000	PF13742	LI89_16000
LI89_16005	PF07191	zinc-ribbons
LI89_16010	PF03547	LI89_16010
LI89_16015	PF01926	50S ribosome-binding GTPase
LI89_16015	PF14714	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
LI89_16025	PF13360	PQQ-like domain
LI89_16030	PF09976	Tetratricopeptide repeat
LI89_16035	PF03129	Anticodon binding domain
LI89_16035	PF13393	Histidyl-tRNA synthetase
LI89_16040	PF04551	GcpE protein
LI89_16045	PF13413	Helix-turn-helix domain
LI89_16045	PF13464	LI89_16045
LI89_16050	PF13181	Tetratricopeptide repeat
LI89_16055	PF04055	Radical SAM superfamily
LI89_16065	PF00334	Nucleoside diphosphate kinase
LI89_16070	PF03995	Peptidase inhibitor family I36
LI89_16070	PF09101	Exotoxin A binding
LI89_16075	PF00905	Penicillin binding protein transpeptidase domain
LI89_16075	PF00912	Transglycosylase
LI89_16075	PF06832	LI89_16075
LI89_16080	PF00207	Alpha-2-macroglobulin family
LI89_16080	PF01835	MG2 domain
LI89_16080	PF07703	Alpha-2-macroglobulin family N-terminal region
LI89_16080	PF10569	Alpha-macro-globulin thiol-ester bond-forming region
LI89_16080	PF11974	Alpha-2-macroglobulin MG1 domain
LI89_16085	PF03212	Pertactin
LI89_16085	PF03797	Autotransporter beta-domain
LI89_16090	PF03212	Pertactin
LI89_16090	PF03797	Autotransporter beta-domain
LI89_16095	PF07179	LI89_16095
LI89_16095	PF14581	LI89_16095
LI89_16100	PF00883	Cytosol aminopeptidase family, catalytic domain
LI89_16100	PF12404	LI89_16100
LI89_16105	PF04384	Iron-sulphur cluster assembly
LI89_16110	PF00111	2Fe-2S iron-sulfur cluster binding domain
LI89_16115	PF00012	Hsp70 protein
LI89_16120	PF00226	DnaJ domain
LI89_16120	PF07743	HSCB C-terminal oligomerisation domain
LI89_16125	PF01521	Iron-sulphur cluster biosynthesis
LI89_16130	PF01592	NifU-like N terminal domain
LI89_16135	PF00266	Aminotransferase class-V
LI89_16140	PF02082	Transcriptional regulator
LI89_16145	PF00588	SpoU rRNA Methylase family
LI89_16150	PF00459	Inositol monophosphatase family
LI89_16155	PF03824	LI89_16155
LI89_16160	PF06226	LI89_16160
LI89_16165	PF00874	PRD domain
LI89_16170	PF12832	MFS_1 like family
LI89_16175	PF00464	Serine hydroxymethyltransferase
LI89_16180	PF00042	Globin
LI89_16180	PF00175	Oxidoreductase NAD-binding domain
LI89_16180	PF00970	Oxidoreductase FAD-binding domain
LI89_16185	PF14502	Helix-turn-helix domain
LI89_16185	PF14503	YhfZ C-terminal domain
LI89_16190	PF00874	PRD domain
LI89_16195	PF01168	Alanine racemase, N-terminal domain
LI89_16200	PF02126	Phosphotriesterase family
LI89_16205	PF10941	LI89_16205
LI89_16210	PF10797	LI89_16210
LI89_16215	PF00543	Nitrogen regulatory protein P-II
LI89_16220	PF00795	Carbon-nitrogen hydrolase
LI89_16220	PF02540	NAD synthase
LI89_16225	PF00072	Response regulator receiver domain
LI89_16225	PF00158	Sigma-54 interaction domain
LI89_16230	PF13942	LI89_16230
LI89_16235	PF00512	His Kinase A (phospho-acceptor) domain
LI89_16235	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
LI89_16245	PF02769	AIR synthase related protein, C-terminal domain
LI89_16245	PF13507	CobB/CobQ-like glutamine amidotransferase domain
LI89_16250	PF00497	Bacterial extracellular solute-binding proteins, family 3
LI89_16250	PF01464	Transglycosylase SLT domain
LI89_16255	PF14437	LI89_16255
LI89_16260	PF09925	LI89_16260
LI89_16265	PF12710	haloacid dehalogenase-like hydrolase
LI89_16270	PF01380	SIS domain
LI89_16275	PF01380	SIS domain
LI89_16275	PF01418	Helix-turn-helix domain, rpiR family
LI89_16280	PF12838	4Fe-4S dicluster domain
LI89_16285	PF02447	LI89_16285
LI89_16290	PF01648	4'-phosphopantetheinyl transferase superfamily
LI89_16295	PF03740	Pyridoxal phosphate biosynthesis protein PdxJ
LI89_16300	PF02565	Recombination protein O C terminal
LI89_16300	PF11967	Recombination protein O N terminal
LI89_16305	PF01926	50S ribosome-binding GTPase
LI89_16305	PF07650	KH domain
LI89_16310	PF00035	Double-stranded RNA binding motif
LI89_16310	PF14622	Ribonuclease-III-like
LI89_16315	PF00717	Peptidase S24-like
LI89_16315	PF10502	Signal peptidase, peptidase S26
LI89_16320	PF00009	Elongation factor Tu GTP binding domain
LI89_16320	PF00679	Elongation factor G C-terminus
LI89_16320	PF03144	Elongation factor Tu domain 2
LI89_16320	PF06421	GTP-binding protein LepA C-terminus
LI89_16330	PF04246	LI89_16330
LI89_16335	PF03888	MucB/RseB family
LI89_16335	PF17188	LI89_16335
LI89_16340	PF03872	Anti sigma-E protein RseA, N-terminal domain
LI89_16340	PF03873	Anti sigma-E protein RseA, C-terminal domain
LI89_16345	PF04542	Sigma-70 region 2
LI89_16345	PF08281	Sigma-70, region 4
LI89_16355	PF00890	FAD binding domain
LI89_16355	PF02910	Fumarate reductase flavoprotein C-term
LI89_16360	PF05175	Methyltransferase small domain
LI89_16365	PF00270	DEAD/DEAH box helicase
LI89_16365	PF00271	Helicase conserved C-terminal domain
LI89_16370	PF00023	Ankyrin repeat
LI89_16370	PF12796	Ankyrin repeats (3 copies)
LI89_16375	PF11187	Protein of unknown function (DUF2974)
LI89_16380	PF01228	Glycine radical
LI89_16385	PF03167	Uracil DNA glycosylase superfamily
LI89_16390	PF01025	GrpE
LI89_16395	PF01513	ATP-NAD kinase
LI89_16400	PF02463	RecF/RecN/SMC N terminal domain
LI89_16405	PF04355	SmpA / OmlA family
LI89_16410	PF03658	RnfH family Ubiquitin
LI89_16415	PF03364	Polyketide cyclase / dehydrase and lipid transport
LI89_16420	PF01668	SmpB protein
LI89_16425	PF00589	Phage integrase family
LI89_16425	PF13356	Domain of unknown function (DUF4102)
LI89_16430	PF07927	YcfA-like protein
LI89_16435	PF05534	LI89_16435
LI89_16445	PF12358	LI89_16445
LI89_16460	PF12834	LI89_16460
LI89_16460	PF12835	Integrase
LI89_16465	PF05930	Prophage CP4-57 regulatory protein (AlpA)
LI89_16475	PF08273	Zinc-binding domain of primase-helicase
LI89_16475	PF13362	Toprim domain
LI89_16480	PF13481	AAA domain
LI89_16495	PF00665	Integrase core domain
LI89_16495	PF13936	Helix-turn-helix domain
LI89_16500	PF01965	DJ-1/PfpI family
LI89_16500	PF12833	Helix-turn-helix domain
LI89_16505	PF12706	Beta-lactamase superfamily domain
LI89_16510	PF10544	LI89_16510
LI89_16520	PF00440	Bacterial regulatory proteins, tetR family
LI89_16525	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
LI89_16530	PF00106	short chain dehydrogenase
LI89_16535	PF00106	short chain dehydrogenase
LI89_16545	PF08240	Alcohol dehydrogenase GroES-like domain
LI89_16545	PF13602	Zinc-binding dehydrogenase
LI89_16550	PF01548	LI89_16550
LI89_16550	PF02371	LI89_16550
LI89_16560	PF10754	LI89_16560
LI89_16570	PF00665	Integrase core domain
LI89_16570	PF13936	Helix-turn-helix domain
LI89_16585	PF13302	Acetyltransferase (GNAT) domain
LI89_16590	PF12833	Helix-turn-helix domain
LI89_16590	PF12852	Cupin
LI89_16595	PF07690	Major Facilitator Superfamily
LI89_16625	PF00916	LI89_16625
LI89_16625	PF01740	STAS domain
LI89_16630	PF04794	YdjC-like protein
LI89_16635	PF07883	Cupin domain
LI89_16635	PF12833	Helix-turn-helix domain
LI89_16640	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit
LI89_16645	PF00232	Glycosyl hydrolase family 1
LI89_16650	PF02378	Phosphotransferase system, EIIC
LI89_16655	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
LI89_16660	PF07995	Glucose / Sorbosone dehydrogenase
LI89_16665	PF02537	LI89_16665
LI89_16670	PF02537	LI89_16670
LI89_16675	PF02254	TrkA-N domain
LI89_16675	PF07885	Ion channel
LI89_16680	PF06411	HdeA/HdeB family
LI89_16685	PF03824	LI89_16685
LI89_16690	PF03253	Urea transporter
LI89_16695	PF01774	UreD urease accessory protein
LI89_16700	PF02492	CobW/HypB/UreG, nucleotide-binding domain
LI89_16705	PF01730	UreF
LI89_16710	PF02814	UreE urease accessory protein, N-terminal domain
LI89_16710	PF05194	UreE urease accessory protein, C-terminal domain
LI89_16715	PF00449	Urease alpha-subunit, N-terminal domain
LI89_16715	PF01979	Amidohydrolase family
LI89_16720	PF00699	Urease beta subunit
LI89_16725	PF00547	Urease, gamma subunit
LI89_16740	PF00005	ABC transporter
LI89_16745	PF00005	ABC transporter
LI89_16750	PF00528	Binding-protein-dependent transport system inner membrane component
LI89_16755	PF00528	Binding-protein-dependent transport system inner membrane component
LI89_16760	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
LI89_16775	PF00581	Rhodanese-like domain
LI89_16780	PF01965	DJ-1/PfpI family
LI89_16780	PF12833	Helix-turn-helix domain
LI89_16785	PF00313	'Cold-shock' DNA-binding domain
LI89_16790	PF04899	LI89_16790
LI89_16795	PF06711	LI89_16795
LI89_16800	PF09400	Protein of unknown function (DUF2002)
LI89_16810	PF12833	Helix-turn-helix domain
LI89_16815	PF07224	Chlorophyllase
LI89_16830	PF05957	LI89_16830
LI89_16835	PF00155	Aminotransferase class I and II
LI89_16835	PF00392	Bacterial regulatory proteins, gntR family
LI89_16840	PF02627	Carboxymuconolactone decarboxylase family
LI89_16845	PF00462	Glutaredoxin
LI89_16850	PF07972	NrdI Flavodoxin like
LI89_16855	PF00317	Ribonucleotide reductase, all-alpha domain
LI89_16855	PF02867	Ribonucleotide reductase, barrel domain
LI89_16855	PF08343	Ribonucleotide reductase N-terminal
LI89_16860	PF00268	Ribonucleotide reductase, small chain
LI89_16865	PF00005	ABC transporter
LI89_16865	PF00571	CBS domain
LI89_16870	PF00528	Binding-protein-dependent transport system inner membrane component
LI89_16875	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
LI89_16885	PF00929	Exonuclease
LI89_16890	PF00075	RNase H
LI89_16895	PF08241	Methyltransferase domain
LI89_16900	PF00753	Metallo-beta-lactamase superfamily
LI89_16900	PF16123	LI89_16900
LI89_16905	PF01464	Transglycosylase SLT domain
LI89_16905	PF01476	LysM domain
LI89_16910	PF03372	Endonuclease/Exonuclease/phosphatase family
LI89_16915	PF07690	Major Facilitator Superfamily
LI89_16920	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
LI89_16920	PF03466	LysR substrate binding domain
LI89_16925	PF00248	Aldo/keto reductase family
LI89_16930	PF00109	Beta-ketoacyl synthase, N-terminal domain
LI89_16930	PF02801	Beta-ketoacyl synthase, C-terminal domain
LI89_16935	PF13561	Enoyl-(Acyl carrier protein) reductase
LI89_16940	PF07977	FabA-like domain
LI89_16945	PF00109	Beta-ketoacyl synthase, N-terminal domain
LI89_16945	PF02801	Beta-ketoacyl synthase, C-terminal domain
LI89_16950	PF11659	LI89_16950
LI89_16955	PF03176	MMPL family
LI89_16960	PF03548	Outer membrane lipoprotein carrier protein LolA
LI89_16965	PF13279	Thioesterase-like superfamily
LI89_16970	PF00535	Glycosyl transferase family 2
LI89_16975	PF07977	FabA-like domain
LI89_16980	PF00501	AMP-binding enzyme
LI89_16990	PF00550	Phosphopantetheine attachment site
LI89_16995	PF00550	Phosphopantetheine attachment site
LI89_17000	PF01553	Acyltransferase
LI89_17005	PF13723	LI89_17005
LI89_17015	PF00891	O-methyltransferase
LI89_17045	PF13242	HAD-hyrolase-like
LI89_17050	PF00005	ABC transporter
LI89_17050	PF09383	NIL domain
LI89_17055	PF00528	Binding-protein-dependent transport system inner membrane component
LI89_17060	PF03180	NLPA lipoprotein
LI89_17065	PF16358	LI89_17065
LI89_17070	PF01980	Uncharacterised protein family UPF0066
LI89_17080	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
LI89_17080	PF03129	Anticodon binding domain
LI89_17080	PF04073	Aminoacyl-tRNA editing domain
LI89_17085	PF04170	NlpE N-terminal domain
LI89_17085	PF17185	LI89_17085
LI89_17090	PF00472	RF-1 domain
LI89_17095	PF07152	YaeQ protein
LI89_17100	PF06786	LI89_17100
LI89_17105	PF07073	Modulator of Rho-dependent transcription termination (ROF)
LI89_17110	PF00034	Cytochrome c
LI89_17115	PF01171	PP-loop family
LI89_17115	PF09179	TilS substrate binding domain
LI89_17115	PF11734	TilS substrate C-terminal domain
LI89_17120	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
LI89_17125	PF01276	Orn/Lys/Arg decarboxylase, major domain
LI89_17125	PF03709	Orn/Lys/Arg decarboxylase, N-terminal domain
LI89_17125	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
LI89_17130	PF03255	Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
LI89_17135	PF01336	OB-fold nucleic acid binding domain
LI89_17135	PF02811	PHP domain
LI89_17135	PF07733	Bacterial DNA polymerase III alpha subunit
LI89_17135	PF14579	Helix-hairpin-helix motif
LI89_17140	PF01351	Ribonuclease HII
LI89_17145	PF02684	LI89_17145
LI89_17150	PF00132	Bacterial transferase hexapeptide (six repeats)
LI89_17150	PF13720	Udp N-acetylglucosamine O-acyltransferase; Domain 2
LI89_17155	PF07977	FabA-like domain
LI89_17160	PF00132	Bacterial transferase hexapeptide (six repeats)
LI89_17160	PF04613	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD
LI89_17165	PF03938	Outer membrane protein (OmpH-like)
LI89_17170	PF01103	Surface antigen
LI89_17170	PF07244	Surface antigen variable number repeat
LI89_17175	PF00595	PDZ domain (Also known as DHR or GLGF)
LI89_17175	PF02163	Peptidase family M50
LI89_17180	PF01148	Cytidylyltransferase family
LI89_17185	PF01255	Putative undecaprenyl diphosphate synthase
LI89_17190	PF02670	1-deoxy-D-xylulose 5-phosphate reductoisomerase
LI89_17190	PF08436	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal
LI89_17190	PF13288	DXP reductoisomerase C-terminal domain
LI89_17195	PF01765	Ribosome recycling factor
LI89_17200	PF00696	Amino acid kinase family
LI89_17205	PF00889	Elongation factor TS
LI89_17210	PF00318	Ribosomal protein S2
LI89_17220	PF00557	Metallopeptidase family M24
LI89_17225	PF01842	ACT domain
LI89_17225	PF01909	Nucleotidyltransferase domain
LI89_17225	PF01966	HD domain
LI89_17225	PF08335	GlnD PII-uridylyltransferase
LI89_17230	PF00132	Bacterial transferase hexapeptide (six repeats)
LI89_17230	PF14602	Hexapeptide repeat of succinyl-transferase
LI89_17230	PF14805	Tetrahydrodipicolinate N-succinyltransferase N-terminal
LI89_17235	PF11944	LI89_17235
LI89_17240	PF00258	Flavodoxin
LI89_17245	PF00849	RNA pseudouridylate synthase
LI89_17250	PF04287	tRNA pseudouridine synthase C
LI89_17260	PF07348	Syd protein (SUKH-2)
LI89_17265	PF14489	QueF-like protein
LI89_17265	PF14819	Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term
LI89_17270	PF03641	Possible lysine decarboxylase
LI89_17270	PF11892	Domain of unknown function (DUF3412)
LI89_17270	PF14793	Domain of unknown function (DUF4478)
LI89_17275	PF01367	5'-3' exonuclease, C-terminal SAM fold
LI89_17275	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
LI89_17280	PF01728	FtsJ-like methyltransferase
LI89_17285	PF04241	LI89_17285
LI89_17290	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
LI89_17290	PF03466	LysR substrate binding domain
LI89_17295	PF06004	Bacterial protein of unknown function (DUF903)
LI89_17300	PF00266	Aminotransferase class-V
LI89_17305	PF02657	Fe-S metabolism associated domain
LI89_17310	PF00899	ThiF family
LI89_17315	PF03562	MltA specific insert domain
LI89_17315	PF06725	3D domain
LI89_17335	PF01520	N-acetylmuramoyl-L-alanine amidase
LI89_17335	PF11741	AMIN domain
LI89_17340	PF00583	Acetyltransferase (GNAT) family
LI89_17340	PF00696	Amino acid kinase family
LI89_17345	PF13538	UvrD-like helicase C-terminal domain
LI89_17345	PF13604	AAA domain
LI89_17350	PF00580	UvrD/REP helicase N-terminal domain
LI89_17350	PF12705	PD-(D/E)XK nuclease superfamily
LI89_17350	PF13361	UvrD-like helicase C-terminal domain
LI89_17355	PF00675	Insulinase (Peptidase family M16)
LI89_17355	PF05193	Peptidase M16 inactive domain
LI89_17355	PF16187	LI89_17355
LI89_17360	PF04257	Exodeoxyribonuclease V, gamma subunit
LI89_17365	PF12528	LI89_17365
LI89_17370	PF10713	LI89_17370
LI89_17375	PF07963	Prokaryotic N-terminal methylation motif
LI89_17380	PF07963	Prokaryotic N-terminal methylation motif
LI89_17385	PF00303	Thymidylate synthase
LI89_17390	PF01790	LI89_17390
LI89_17395	PF00391	PEP-utilising enzyme, mobile domain
LI89_17395	PF01590	GAF domain
LI89_17395	PF02896	PEP-utilising enzyme, TIM barrel domain
LI89_17395	PF05524	PEP-utilising enzyme, N-terminal
LI89_17400	PF00293	NUDIX domain
LI89_17410	PF02976	DNA mismatch repair enzyme MutH
LI89_17415	PF03741	LI89_17415
LI89_17420	PF00248	Aldo/keto reductase family
LI89_17425	PF07690	Major Facilitator Superfamily
LI89_17430	PF00501	AMP-binding enzyme
LI89_17430	PF01553	Acyltransferase
LI89_17430	PF13193	AMP-binding enzyme C-terminal domain
LI89_17435	PF00384	Molybdopterin oxidoreductase
LI89_17435	PF01568	Molydopterin dinucleotide binding domain
LI89_17440	PF00356	Bacterial regulatory proteins, lacI family
LI89_17440	PF13377	Periplasmic binding protein-like domain
LI89_17445	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
LI89_17445	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
LI89_17450	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
LI89_17450	PF03466	LysR substrate binding domain
LI89_17455	PF07690	Major Facilitator Superfamily
LI89_17460	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
LI89_17460	PF03466	LysR substrate binding domain
LI89_17465	PF00753	Metallo-beta-lactamase superfamily
LI89_17470	PF01323	DSBA-like thioredoxin domain
LI89_17475	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
LI89_17475	PF02203	Tar ligand binding domain homologue
LI89_17485	PF00486	Transcriptional regulatory protein, C terminal
LI89_17490	PF09691	Bacterial chaperone lipoprotein (PulS_OutS)
LI89_17495	PF01478	Type IV leader peptidase family
LI89_17495	PF06750	LI89_17495
LI89_17505	PF05134	Type II secretion system (T2SS), protein L
LI89_17510	PF03934	Type II secretion system (T2SS), protein K
LI89_17515	PF11612	Type II secretion system (T2SS), protein J
LI89_17520	PF02501	Type II secretion system (T2SS), protein I
LI89_17525	PF07963	Prokaryotic N-terminal methylation motif
LI89_17525	PF08334	Type II secretion system (T2SS), protein G
LI89_17530	PF00482	Type II secretion system (T2SS), protein F
LI89_17535	PF00437	Type II/IV secretion system protein
LI89_17540	PF00263	LI89_17540
LI89_17540	PF03958	Bacterial type II/III secretion system short domain
LI89_17545	PF11356	Type IV pilus biogenesis
LI89_17555	PF00484	Carbonic anhydrase
LI89_17560	PF01638	HxlR-like helix-turn-helix
LI89_17565	PF13561	Enoyl-(Acyl carrier protein) reductase
LI89_17570	PF13591	MerR HTH family regulatory protein
LI89_17575	PF00226	DnaJ domain
LI89_17575	PF01556	DnaJ C terminal domain
LI89_17580	PF00356	Bacterial regulatory proteins, lacI family
LI89_17580	PF13377	Periplasmic binding protein-like domain
LI89_17585	PF07690	Major Facilitator Superfamily
LI89_17590	PF01055	Glycosyl hydrolases family 31
LI89_17590	PF13802	Galactose mutarotase-like
LI89_17590	PF17137	LI89_17590
LI89_17595	PF09391	Protein of unknown function (DUF2000)
LI89_17600	PF01037	AsnC family
LI89_17600	PF13412	Winged helix-turn-helix DNA-binding
LI89_17605	PF00990	GGDEF domain
LI89_17605	PF08448	PAS fold
LI89_17610	PF13474	SnoaL-like domain
LI89_17615	PF03960	ArsC family
LI89_17620	PF02040	LI89_17620
LI89_17625	PF01022	Bacterial regulatory protein, arsR family
LI89_17630	PF08020	Protein of unknown function (DUF1706)
LI89_17640	PF02661	Fic/DOC family
LI89_17685	PF06048	LI89_17685
LI89_17685	PF08273	Zinc-binding domain of primase-helicase
LI89_17685	PF13362	Toprim domain
LI89_17730	PF08346	LI89_17730
LI89_17740	PF05930	Prophage CP4-57 regulatory protein (AlpA)
LI89_17755	PF00589	Phage integrase family
LI89_17755	PF13356	Domain of unknown function (DUF4102)
LI89_17765	PF00152	tRNA synthetases class II (D, K and N)
LI89_17765	PF01336	OB-fold nucleic acid binding domain
LI89_17770	PF00472	RF-1 domain
LI89_17770	PF03462	PCRF domain
LI89_17775	PF01368	DHH family
LI89_17775	PF02272	DHHA1 domain
LI89_17780	PF10411	Disulfide bond isomerase protein N-terminus
LI89_17780	PF13098	Thioredoxin-like domain
LI89_17785	PF00589	Phage integrase family
LI89_17785	PF02899	Phage integrase, N-terminal SAM-like domain
LI89_17790	PF00258	Flavodoxin
LI89_17795	PF06123	LI89_17795
LI89_17800	PF00512	His Kinase A (phospho-acceptor) domain
LI89_17800	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
LI89_17800	PF14827	Sensory domain of two-component sensor kinase
LI89_17805	PF00072	Response regulator receiver domain
LI89_17805	PF00486	Transcriptional regulatory protein, C terminal
LI89_17810	PF07254	LI89_17810
LI89_17815	PF03937	Flavinator of succinate dehydrogenase
LI89_17820	PF01571	Aminomethyltransferase folate-binding domain
LI89_17825	PF03006	LI89_17825
LI89_17830	PF13023	HD domain
LI89_17835	PF13561	Enoyl-(Acyl carrier protein) reductase
LI89_17840	PF13924	LI89_17840
LI89_17845	PF02347	Glycine cleavage system P-protein
LI89_17855	PF01597	Glycine cleavage H-protein
LI89_17860	PF01571	Aminomethyltransferase folate-binding domain
LI89_17860	PF08669	Glycine cleavage T-protein C-terminal barrel domain
LI89_17865	PF01494	FAD binding domain
LI89_17870	PF01494	FAD binding domain
LI89_17875	PF00557	Metallopeptidase family M24
LI89_17875	PF05195	Aminopeptidase P, N-terminal domain
LI89_17880	PF03695	Uncharacterised protein family (UPF0149)
LI89_17885	PF05164	Cell division protein ZapA
LI89_17890	PF01812	5-formyltetrahydrofolate cyclo-ligase family
LI89_17895	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
LI89_17895	PF01842	ACT domain
LI89_17895	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
LI89_17900	PF06026	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
LI89_17905	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
LI89_17905	PF03466	LysR substrate binding domain
LI89_17910	PF04402	Protein of unknown function (DUF541)
LI89_17915	PF01810	LI89_17915
LI89_17920	PF00924	Mechanosensitive ion channel
LI89_17920	PF05552	Conserved TM helix
LI89_17925	PF01116	Fructose-bisphosphate aldolase class-II
LI89_17930	PF00162	Phosphoglycerate kinase
LI89_17935	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
LI89_17935	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
LI89_17940	PF00456	Transketolase, thiamine diphosphate binding domain
LI89_17940	PF02779	Transketolase, pyrimidine binding domain
LI89_17940	PF02780	Transketolase, C-terminal domain
LI89_17945	PF01435	Peptidase family M48
LI89_17950	PF00355	Rieske [2Fe-2S] domain
LI89_17955	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
LI89_17965	PF00438	S-adenosylmethionine synthetase, N-terminal domain
LI89_17965	PF02772	S-adenosylmethionine synthetase, central domain
LI89_17965	PF02773	S-adenosylmethionine synthetase, C-terminal domain
LI89_17970	PF04143	LI89_17970
LI89_17975	PF04143	LI89_17975
LI89_17980	PF01022	Bacterial regulatory protein, arsR family
LI89_17985	PF10263	LI89_17985
LI89_17985	PF17283	LI89_17985
LI89_17990	PF04231	Endonuclease I
LI89_17995	PF04452	RNA methyltransferase
LI89_18000	PF02951	Prokaryotic glutathione synthetase, N-terminal domain
LI89_18000	PF02955	Prokaryotic glutathione synthetase, ATP-grasp domain
LI89_18005	PF02622	Uncharacterized ACR, COG1678
LI89_18010	PF03652	Uncharacterised protein family (UPF0081)
LI89_18015	PF00795	Carbon-nitrogen hydrolase
LI89_18020	PF04371	Porphyromonas-type peptidyl-arginine deiminase
LI89_18025	PF00437	Type II/IV secretion system protein
LI89_18030	PF01168	Alanine racemase, N-terminal domain
LI89_18035	PF03807	NADP oxidoreductase coenzyme F420-dependent
LI89_18035	PF14748	Pyrroline-5-carboxylate reductase dimerisation
LI89_18040	PF02325	LI89_18040
LI89_18045	PF02594	Uncharacterised ACR, YggU family COG1872
LI89_18050	PF01725	Ham1 family
LI89_18055	PF04055	Radical SAM superfamily
LI89_18055	PF06969	HemN C-terminal domain
LI89_18060	PF11101	LI89_18060
LI89_18065	PF04960	Glutaminase
LI89_18070	PF04320	LI89_18070
LI89_18075	PF02390	Putative methyltransferase
LI89_18080	PF00633	Helix-hairpin-helix motif
LI89_18080	PF00730	HhH-GPD superfamily base excision DNA repair protein
LI89_18080	PF10576	Iron-sulfur binding domain of endonuclease III
LI89_18080	PF14815	NUDIX domain
LI89_18085	PF04362	Bacterial Fe(2+) trafficking
LI89_18090	PF01464	Transglycosylase SLT domain
LI89_18090	PF11873	Domain of unknown function (DUF3393)
LI89_18095	PF01925	LI89_18095
LI89_18100	PF01276	Orn/Lys/Arg decarboxylase, major domain
LI89_18100	PF03709	Orn/Lys/Arg decarboxylase, N-terminal domain
LI89_18100	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
LI89_18115	PF00072	Response regulator receiver domain
LI89_18115	PF00486	Transcriptional regulatory protein, C terminal
LI89_18125	PF00512	His Kinase A (phospho-acceptor) domain
LI89_18125	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
LI89_18130	PF00196	Bacterial regulatory proteins, luxR family
LI89_18135	PF02275	Linear amide C-N hydrolases, choloylglycine hydrolase family
LI89_18150	PF13520	Amino acid permease
LI89_18155	PF01276	Orn/Lys/Arg decarboxylase, major domain
LI89_18155	PF03709	Orn/Lys/Arg decarboxylase, N-terminal domain
LI89_18155	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
LI89_18160	PF02321	Outer membrane efflux protein
LI89_18165	PF04632	LI89_18165
LI89_18170	PF13437	HlyD family secretion protein
LI89_18170	PF13533	Biotin-lipoyl like
LI89_18175	PF17090	LI89_18175
LI89_18180	PF01979	Amidohydrolase family
LI89_18185	PF11903	LI89_18185
LI89_18190	PF00557	Metallopeptidase family M24
LI89_18195	PF00005	ABC transporter
LI89_18200	PF01032	FecCD transport family
LI89_18205	PF01032	FecCD transport family
LI89_18210	PF01497	Periplasmic binding protein
LI89_18215	PF00891	O-methyltransferase
LI89_18220	PF00891	O-methyltransferase
LI89_18225	PF00892	EamA-like transporter family
LI89_18230	PF00155	Aminotransferase class I and II
LI89_18230	PF00392	Bacterial regulatory proteins, gntR family
LI89_18235	PF04299	Putative FMN-binding domain
LI89_18240	PF00083	Sugar (and other) transporter
LI89_18245	PF00356	Bacterial regulatory proteins, lacI family
LI89_18245	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
LI89_18250	PF01156	Inosine-uridine preferring nucleoside hydrolase
LI89_18255	PF01895	PhoU domain
LI89_18255	PF02690	LI89_18255
LI89_18260	PF00857	Isochorismatase family
LI89_18270	PF00083	Sugar (and other) transporter
LI89_18270	PF08946	Osmosensory transporter coiled coil
LI89_18275	PF15977	LI89_18275
LI89_18280	PF00196	Bacterial regulatory proteins, luxR family
LI89_18285	PF00873	AcrB/AcrD/AcrF family
LI89_18290	PF16576	LI89_18290
LI89_18295	PF00563	EAL domain
LI89_18295	PF00989	PAS fold
LI89_18295	PF00990	GGDEF domain
LI89_18295	PF05228	LI89_18295
LI89_18300	PF11769	LI89_18300
LI89_18310	PF02110	Hydroxyethylthiazole kinase family
LI89_18315	PF00708	Acylphosphatase
LI89_18315	PF01300	Telomere recombination
LI89_18315	PF07503	HypF finger
LI89_18320	PF00586	AIR synthase related protein, N-terminal domain
LI89_18320	PF02769	AIR synthase related protein, C-terminal domain
LI89_18325	PF01924	Hydrogenase formation hypA family
LI89_18330	PF01455	HupF/HypC family
LI89_18335	PF02492	CobW/HypB/UreG, nucleotide-binding domain
LI89_18340	PF01155	Hydrogenase expression/synthesis hypA family
LI89_18345	PF11939	Protein of unknown function (DUF3457)
LI89_18350	PF01750	Hydrogenase maturation protease
LI89_18355	PF00374	Nickel-dependent hydrogenase
LI89_18365	PF13247	4Fe-4S dicluster domain
LI89_18370	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
LI89_18370	PF14720	NiFe/NiFeSe hydrogenase small subunit C-terminal
LI89_18375	PF05433	LI89_18375
LI89_18380	PF00691	OmpA family
LI89_18390	PF00771	FHIPEP family
LI89_18400	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
LI89_18400	PF02203	Tar ligand binding domain homologue
LI89_18405	PF01370	NAD dependent epimerase/dehydratase family
LI89_18410	PF07690	Major Facilitator Superfamily
LI89_18415	PF01497	Periplasmic binding protein
LI89_18420	PF01032	FecCD transport family
LI89_18425	PF01032	FecCD transport family
LI89_18430	PF00005	ABC transporter
LI89_18435	PF00756	Putative esterase
LI89_18435	PF11806	Domain of unknown function (DUF3327)
LI89_18440	PF00593	TonB dependent receptor
LI89_18440	PF07715	TonB-dependent Receptor Plug Domain
LI89_18450	PF11604	Copper binding periplasmic protein CusF
LI89_18455	PF02321	Outer membrane efflux protein
LI89_18460	PF11604	Copper binding periplasmic protein CusF
LI89_18460	PF16576	LI89_18460
LI89_18465	PF00873	AcrB/AcrD/AcrF family
LI89_18470	PF13532	2OG-Fe(II) oxygenase superfamily
LI89_18475	PF00486	Transcriptional regulatory protein, C terminal
LI89_18485	PF01478	Type IV leader peptidase family
LI89_18495	PF00263	LI89_18495
LI89_18495	PF13629	LI89_18495
LI89_18510	PF00437	Type II/IV secretion system protein
LI89_18515	PF00482	Type II secretion system (T2SS), protein F
LI89_18520	PF00482	Type II secretion system (T2SS), protein F
LI89_18530	PF07811	LI89_18530
LI89_18535	PF16964	LI89_18535
LI89_18545	PF02472	Biopolymer transport protein ExbD/TolR
LI89_18550	PF01618	LI89_18550
LI89_18555	PF01053	Cys/Met metabolism PLP-dependent enzyme
LI89_18560	PF09335	LI89_18560
LI89_18565	PF06719	LI89_18565
LI89_18565	PF12833	Helix-turn-helix domain
LI89_18570	PF00465	Iron-containing alcohol dehydrogenase
LI89_18575	PF00248	Aldo/keto reductase family
LI89_18580	PF04055	Radical SAM superfamily
LI89_18580	PF08497	LI89_18580
LI89_18580	PF11842	LI89_18580
LI89_18590	PF00394	Multicopper oxidase
LI89_18590	PF07731	Multicopper oxidase
LI89_18590	PF07732	Multicopper oxidase
LI89_18595	PF01553	Acyltransferase
LI89_18600	PF00521	DNA gyrase/topoisomerase IV, subunit A
LI89_18600	PF03989	DNA gyrase C-terminal domain, beta-propeller
LI89_18605	PF02525	Flavodoxin-like fold
LI89_18610	PF03992	Antibiotic biosynthesis monooxygenase
LI89_18615	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
LI89_18615	PF03466	LysR substrate binding domain
LI89_18620	PF00204	DNA gyrase B
LI89_18620	PF00986	DNA gyrase B subunit, carboxyl terminus
LI89_18620	PF01751	Toprim domain
LI89_18620	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
LI89_18625	PF05728	Uncharacterised protein family (UPF0227)
LI89_18630	PF00149	Calcineurin-like phosphoesterase
LI89_18635	PF06853	LI89_18635
LI89_18640	PF00293	NUDIX domain
LI89_18645	PF02321	Outer membrane efflux protein
LI89_18650	PF06693	LI89_18650
LI89_18655	PF03738	Glutathionylspermidine synthase preATP-grasp
LI89_18660	PF02900	Catalytic LigB subunit of aromatic ring-opening dioxygenase
LI89_18665	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
LI89_18670	PF04380	LI89_18670
LI89_18675	PF13520	Amino acid permease
LI89_18680	PF00294	pfkB family carbohydrate kinase
LI89_18680	PF01467	Cytidylyltransferase
LI89_18685	PF03710	Glutamate-ammonia ligase adenylyltransferase
LI89_18685	PF08335	GlnD PII-uridylyltransferase
LI89_18690	PF01928	CYTH domain
LI89_18695	PF08239	Bacterial SH3 domain
LI89_18700	PF01743	Poly A polymerase head domain
LI89_18700	PF01966	HD domain
LI89_18700	PF12627	Probable RNA and SrmB- binding site of polymerase A
LI89_18705	PF02673	LI89_18705
LI89_18710	PF02152	Dihydroneopterin aldolase
LI89_18715	PF02660	LI89_18715
LI89_18720	PF00814	Glycoprotease family
LI89_18725	PF01165	Ribosomal protein S21
LI89_18730	PF01807	CHC2 zinc finger
LI89_18730	PF08275	DNA primase catalytic core, N-terminal domain
LI89_18730	PF08278	DNA primase DnaG DnaB-binding
LI89_18730	PF10410	DnaB-helicase binding domain of primase
LI89_18730	PF13155	Toprim-like
LI89_18735	PF00140	Sigma-70 factor, region 1
LI89_18735	PF03979	Sigma-70 factor, region 1
LI89_18735	PF04539	Sigma-70 region 3
LI89_18735	PF04542	Sigma-70 region 2
LI89_18735	PF04545	Sigma-70, region 4
LI89_18735	PF04546	Sigma-70, non-essential region
LI89_18745	PF13708	LI89_18745
LI89_18750	PF06755	LI89_18750
LI89_18755	PF06154	YagB/YeeU/YfjZ family
LI89_18760	PF04002	RadC-like JAB domain
LI89_18765	PF03230	Antirestriction protein
LI89_18770	PF06006	Bacterial protein of unknown function (DUF905)
LI89_18785	PF08220	DeoR-like helix-turn-helix domain
LI89_18785	PF13280	LI89_18785
LI89_18790	PF06067	LI89_18790
LI89_18795	PF01926	50S ribosome-binding GTPase
LI89_18810	PF13180	PDZ domain
LI89_18810	PF13365	Trypsin-like peptidase domain
LI89_18815	PF01435	Peptidase family M48
LI89_18820	PF06146	LI89_18820
LI89_18825	PF00999	Sodium/hydrogen exchanger family
LI89_18825	PF02254	TrkA-N domain
LI89_18830	PF00085	Thioredoxin
LI89_18840	PF03729	LI89_18840
LI89_18845	PF10938	YfdX protein
LI89_18850	PF10938	YfdX protein
LI89_18855	PF00011	Hsp20/alpha crystallin family
LI89_18860	PF00004	ATPase family associated with various cellular activities (AAA)
LI89_18860	PF01434	Peptidase family M41
LI89_18860	PF06480	FtsH Extracellular
LI89_18870	PF00004	ATPase family associated with various cellular activities (AAA)
LI89_18870	PF02861	Clp amino terminal domain
LI89_18870	PF07724	AAA domain (Cdc48 subfamily)
LI89_18870	PF10431	C-terminal, D2-small domain, of ClpB protein
LI89_18875	PF00011	Hsp20/alpha crystallin family
LI89_18880	PF12728	Helix-turn-helix domain
LI89_18900	PF00665	Integrase core domain
LI89_18900	PF13276	LI89_18900
LI89_18905	PF01527	Transposase
LI89_18915	PF11726	LI89_18915
LI89_18920	PF13148	LI89_18920
LI89_18925	PF05930	Prophage CP4-57 regulatory protein (AlpA)
LI89_18940	PF02661	Fic/DOC family
LI89_18945	PF00589	Phage integrase family
LI89_18945	PF13356	Domain of unknown function (DUF4102)
LI89_18950	PF07075	Protein of unknown function (DUF1343)
LI89_18960	PF00933	Glycosyl hydrolase family 3 N terminal domain
LI89_18965	PF01380	SIS domain
LI89_18965	PF01418	Helix-turn-helix domain, rpiR family
LI89_18970	PF13580	SIS domain
LI89_18975	PF00367	phosphotransferase system, EIIB
LI89_18975	PF02378	Phosphotransferase system, EIIC
LI89_18980	PF04960	Glutaminase
LI89_18985	PF13520	Amino acid permease
LI89_18990	PF00282	Pyridoxal-dependent decarboxylase conserved domain
LI89_18995	PF01638	HxlR-like helix-turn-helix
LI89_19000	PF07690	Major Facilitator Superfamily
LI89_19005	PF03729	LI89_19005
LI89_19010	PF00892	EamA-like transporter family
LI89_19015	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
LI89_19015	PF07992	Pyridine nucleotide-disulphide oxidoreductase
LI89_19020	PF05175	Methyltransferase small domain
LI89_19025	PF03212	Pertactin
LI89_19025	PF03797	Autotransporter beta-domain
LI89_19030	PF01863	Protein of unknown function DUF45
LI89_19035	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
LI89_19040	PF03741	LI89_19040
LI89_19045	PF00375	Sodium:dicarboxylate symporter family
LI89_19050	PF10688	LI89_19050
LI89_19055	PF04295	LI89_19055
LI89_19055	PF08666	SAF domain
LI89_19060	PF01232	Mannitol dehydrogenase Rossmann domain
LI89_19060	PF08125	Mannitol dehydrogenase C-terminal domain
LI89_19065	PF02614	Glucuronate isomerase
LI89_19070	PF07690	Major Facilitator Superfamily
LI89_19075	PF00392	Bacterial regulatory proteins, gntR family
LI89_19075	PF07729	FCD domain
LI89_19085	PF09335	LI89_19085
LI89_19090	PF13721	SecD export protein N-terminal TM region
LI89_19095	PF06476	LI89_19095
LI89_19100	PF05957	LI89_19100
LI89_19105	PF07332	LI89_19105
LI89_19110	PF13997	LI89_19110
LI89_19115	PF07681	LI89_19115
LI89_19120	PF13409	Glutathione S-transferase, N-terminal domain
LI89_19120	PF13410	Glutathione S-transferase, C-terminal domain
LI89_19125	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
LI89_19125	PF03466	LysR substrate binding domain
LI89_19130	PF02678	Pirin
LI89_19135	PF00107	Zinc-binding dehydrogenase
LI89_19135	PF08240	Alcohol dehydrogenase GroES-like domain
LI89_19140	PF00248	Aldo/keto reductase family
LI89_19145	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
LI89_19145	PF03466	LysR substrate binding domain
LI89_19150	PF01381	Helix-turn-helix
LI89_19160	PF00145	C-5 cytosine-specific DNA methylase
LI89_19170	PF00239	Resolvase, N terminal domain
LI89_19175	PF11726	LI89_19175
LI89_19200	PF00589	Phage integrase family
LI89_19200	PF11646	Protein of unknown function DUF3258
LI89_19205	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
LI89_19210	PF04348	LppC putative lipoprotein
LI89_19215	PF02021	Uncharacterised protein family UPF0102
LI89_19220	PF13580	SIS domain
LI89_19225	PF04972	BON domain
LI89_19230	PF00912	Transglycosylase
LI89_19240	PF00072	Response regulator receiver domain
LI89_19240	PF00512	His Kinase A (phospho-acceptor) domain
LI89_19240	PF00989	PAS fold
LI89_19240	PF01627	Hpt domain
LI89_19240	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
LI89_19245	PF04055	Radical SAM superfamily
LI89_19245	PF16199	LI89_19245
LI89_19250	PF00310	Glutamine amidotransferases class-II
LI89_19250	PF01493	GXGXG motif
LI89_19250	PF01645	Conserved region in glutamate synthase
LI89_19250	PF04898	Glutamate synthase central domain
LI89_19255	PF07992	Pyridine nucleotide-disulphide oxidoreductase
LI89_19255	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
LI89_19265	PF04386	Stringent starvation protein B
LI89_19270	PF00043	Glutathione S-transferase, C-terminal domain
LI89_19270	PF02798	Glutathione S-transferase, N-terminal domain
LI89_19280	PF00380	Ribosomal protein S9/S16
LI89_19285	PF00572	Ribosomal protein L13
LI89_19290	PF03969	AFG1-like ATPase
LI89_19295	PF06295	LI89_19295
LI89_19300	PF00595	PDZ domain (Also known as DHR or GLGF)
LI89_19300	PF13365	Trypsin-like peptidase domain
LI89_19305	PF13180	PDZ domain
LI89_19305	PF13365	Trypsin-like peptidase domain
LI89_19310	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
LI89_19315	PF01722	BolA-like protein
LI89_19320	PF13466	STAS domain
LI89_19325	PF05494	Toluene tolerance, Ttg2
LI89_19330	PF02470	LI89_19330
LI89_19335	PF02405	LI89_19335
LI89_19340	PF00005	ABC transporter
LI89_19345	PF01699	Sodium/calcium exchanger protein
LI89_19350	PF00571	CBS domain
LI89_19350	PF01380	SIS domain
LI89_19355	PF08282	haloacid dehalogenase-like hydrolase
LI89_19360	PF06835	Lipopolysaccharide-assembly, LptC-related
LI89_19365	PF03968	OstA-like protein
LI89_19370	PF00005	ABC transporter
LI89_19370	PF12399	Branched-chain amino acid ATP-binding cassette transporter
LI89_19375	PF00309	LI89_19375
LI89_19375	PF04552	Sigma-54, DNA binding domain
LI89_19375	PF04963	Sigma-54 factor, core binding domain
LI89_19380	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
LI89_19385	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
LI89_19390	PF03668	LI89_19390
LI89_19395	PF00381	PTS HPr component phosphorylation site
LI89_19405	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
LI89_19405	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
LI89_19410	PF01948	Aspartate carbamoyltransferase regulatory chain, allosteric domain
LI89_19410	PF02748	Aspartate carbamoyltransferase regulatory chain, metal binding domain
LI89_19415	PF01042	Endoribonuclease L-PSP
LI89_19425	PF14403	LI89_19425
LI89_19430	PF04168	LI89_19430
LI89_19435	PF01841	Transglutaminase-like superfamily
LI89_19435	PF08379	LI89_19435
LI89_19440	PF00227	Proteasome subunit
LI89_19450	PF00128	Alpha amylase, catalytic domain
LI89_19450	PF11941	Domain of unknown function (DUF3459)
LI89_19455	PF00367	phosphotransferase system, EIIB
LI89_19455	PF02378	Phosphotransferase system, EIIC
LI89_19460	PF00356	Bacterial regulatory proteins, lacI family
LI89_19460	PF13377	Periplasmic binding protein-like domain
LI89_19465	PF00122	E1-E2 ATPase
LI89_19465	PF00690	Cation transporter/ATPase, N-terminus
LI89_19465	PF00702	haloacid dehalogenase-like hydrolase
LI89_19470	PF05015	Plasmid maintenance system killer protein
LI89_19475	PF01381	Helix-turn-helix
LI89_19480	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
LI89_19480	PF00874	PRD domain
LI89_19480	PF05043	Mga helix-turn-helix domain
LI89_19480	PF08279	HTH domain
LI89_19485	PF10282	Lactonase, 7-bladed beta-propeller
LI89_19490	PF07071	Protein of unknown function (DUF1341)
LI89_19495	PF03841	L-seryl-tRNA selenium transferase
LI89_19500	PF01979	Amidohydrolase family
LI89_19505	PF14187	LI89_19505
LI89_19510	PF14188	LI89_19510
LI89_19515	PF14189	LI89_19515
LI89_19520	PF14272	LI89_19520
LI89_19530	PF01272	Transcription elongation factor, GreA/GreB, C-term
LI89_19530	PF14760	Rnk N-terminus
LI89_19535	PF07361	Cytochrome b562
LI89_19540	PF01523	Putative modulator of DNA gyrase
LI89_19545	PF04751	Protein of unknown function (DUF615)
LI89_19550	PF01337	Barstar (barnase inhibitor)
LI89_19555	PF00545	ribonuclease
LI89_19560	PF00171	Aldehyde dehydrogenase family
LI89_19565	PF04632	LI89_19565
LI89_19570	PF13437	HlyD family secretion protein
LI89_19570	PF13533	Biotin-lipoyl like
LI89_19575	PF07869	LI89_19575
LI89_19580	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
LI89_19580	PF03466	LysR substrate binding domain
LI89_19585	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
LI89_19595	PF03534	Salmonella virulence plasmid 65kDa B protein
LI89_19595	PF12255	Insecticide toxin TcdB middle/C-terminal region
LI89_19595	PF12256	Insecticide toxin TcdB middle/N-terminal region
LI89_19600	PF16083	LI89_19600
LI89_19605	PF13539	D-alanyl-D-alanine carboxypeptidase
LI89_19610	PF10828	LI89_19610
LI89_19625	PF01523	Putative modulator of DNA gyrase
LI89_19630	PF00795	Carbon-nitrogen hydrolase
LI89_19635	PF13116	LI89_19635
LI89_19635	PF13502	LI89_19635
LI89_19640	PF00575	S1 RNA binding domain
LI89_19640	PF10150	Ribonuclease E/G family
LI89_19645	PF02545	Maf-like protein
LI89_19650	PF04093	LI89_19650
LI89_19655	PF04085	rod shape-determining protein MreC
LI89_19660	PF06723	MreB/Mbl protein
LI89_19665	PF00563	EAL domain
LI89_19665	PF00990	GGDEF domain
LI89_19665	PF17157	LI89_19665
LI89_19670	PF00107	Zinc-binding dehydrogenase
LI89_19670	PF08240	Alcohol dehydrogenase GroES-like domain
LI89_19675	PF00174	Oxidoreductase molybdopterin binding domain
LI89_19680	PF01794	LI89_19680
LI89_19685	PF01220	Dehydroquinase class II
LI89_19690	PF00364	Biotin-requiring enzyme
LI89_19695	PF00289	Carbamoyl-phosphate synthase L chain, N-terminal domain
LI89_19695	PF02785	Biotin carboxylase C-terminal domain
LI89_19695	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
LI89_19700	PF06196	LI89_19700
LI89_19705	PF00474	Sodium:solute symporter family
LI89_19710	PF06325	Ribosomal protein L11 methyltransferase (PrmA)
LI89_19715	PF01207	Dihydrouridine synthase (Dus)
LI89_19720	PF02954	Bacterial regulatory protein, Fis family
LI89_19730	PF06805	LI89_19730
LI89_19735	PF03354	LI89_19735
LI89_19740	PF05119	LI89_19740
LI89_19750	PF01844	HNH endonuclease
LI89_19755	PF05135	Phage gp6-like head-tail connector protein
LI89_19760	PF05521	Phage head-tail joining protein
LI89_19765	PF04860	Phage portal protein
LI89_19770	PF04586	LI89_19770
LI89_19775	PF05065	Phage capsid family
LI89_19785	PF03288	Poxvirus D5 protein-like
LI89_19785	PF08273	Zinc-binding domain of primase-helicase
LI89_19785	PF08706	LI89_19785
LI89_19785	PF13362	Toprim domain
LI89_19795	PF13973	LI89_19795
LI89_19825	PF05930	Prophage CP4-57 regulatory protein (AlpA)
LI89_19835	PF00589	Phage integrase family
LI89_19835	PF13356	Domain of unknown function (DUF4102)
LI89_19840	PF00990	GGDEF domain
LI89_19840	PF02743	Cache domain
LI89_19845	PF05433	LI89_19845
LI89_19850	PF00313	'Cold-shock' DNA-binding domain
LI89_19855	PF00313	'Cold-shock' DNA-binding domain
LI89_19860	PF00313	'Cold-shock' DNA-binding domain
LI89_19865	PF00939	Sodium:sulfate symporter transmembrane region
LI89_19870	PF03279	LI89_19870
LI89_19875	PF10142	PhoPQ-activated pathogenicity-related protein
LI89_19880	PF00497	Bacterial extracellular solute-binding proteins, family 3
LI89_19885	PF00528	Binding-protein-dependent transport system inner membrane component
LI89_19890	PF00528	Binding-protein-dependent transport system inner membrane component
LI89_19895	PF00005	ABC transporter
LI89_19900	PF04172	LI89_19900
LI89_19905	PF03788	LI89_19905
LI89_19910	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
LI89_19910	PF03466	LysR substrate binding domain
LI89_19915	PF00999	Sodium/hydrogen exchanger family
LI89_19920	PF00860	Permease family
LI89_19925	PF00043	Glutathione S-transferase, C-terminal domain
LI89_19925	PF02798	Glutathione S-transferase, N-terminal domain
LI89_19930	PF00436	Single-strand binding protein family
LI89_19940	PF04237	YjbR
LI89_19945	PF00155	Aminotransferase class I and II
LI89_19950	PF00842	Alanine racemase, C-terminal domain
LI89_19950	PF01168	Alanine racemase, N-terminal domain
LI89_19955	PF00772	DnaB-like helicase N terminal domain
LI89_19955	PF03796	DnaB-like helicase C terminal domain
LI89_19960	PF00107	Zinc-binding dehydrogenase
LI89_19960	PF08240	Alcohol dehydrogenase GroES-like domain
LI89_19970	PF09583	LI89_19970
LI89_19975	PF01207	Dihydrouridine synthase (Dus)
LI89_19980	PF01475	Ferric uptake regulator family
LI89_19985	PF05532	CsbD-like
LI89_19990	PF00717	Peptidase S24-like
LI89_19990	PF01726	LexA DNA binding domain
LI89_19995	PF01219	Prokaryotic diacylglycerol kinase
LI89_20000	PF01553	Acyltransferase
LI89_20005	PF01040	UbiA prenyltransferase family
LI89_20010	PF04345	Chorismate lyase
LI89_20015	PF07148	LI89_20015
LI89_20020	PF02264	LamB porin
LI89_20025	PF00005	ABC transporter
LI89_20025	PF08402	TOBE domain
LI89_20030	PF13416	Bacterial extracellular solute-binding protein
LI89_20035	PF00528	Binding-protein-dependent transport system inner membrane component
LI89_20035	PF14785	Maltose transport system permease protein MalF P2 domain
LI89_20040	PF00528	Binding-protein-dependent transport system inner membrane component
LI89_20045	PF06146	LI89_20045
LI89_20050	PF00342	Phosphoglucose isomerase
LI89_20055	PF00696	Amino acid kinase family
LI89_20060	PF01758	Sodium Bile acid symporter family
LI89_20065	PF03865	Haemolysin secretion/activation protein ShlB/FhaC/HecB
LI89_20065	PF08479	POTRA domain, ShlB-type
LI89_20065	PF17287	LI89_20065
LI89_20070	PF05860	haemagglutination activity domain
LI89_20070	PF13332	LI89_20070
LI89_20075	PF00809	Pterin binding enzyme
LI89_20075	PF02310	B12 binding domain
LI89_20075	PF02574	Homocysteine S-methyltransferase
LI89_20075	PF02607	B12 binding domain
LI89_20075	PF02965	Vitamin B12 dependent methionine synthase, activation domain
LI89_20080	PF01614	Bacterial transcriptional regulator
LI89_20080	PF09339	IclR helix-turn-helix domain
LI89_20085	PF06315	Isocitrate dehydrogenase kinase/phosphatase (AceK)
LI89_20090	PF00463	Isocitrate lyase family
LI89_20095	PF01274	Malate synthase
LI89_20100	PF04204	Homoserine O-succinyltransferase
LI89_20130	PF00132	Bacterial transferase hexapeptide (six repeats)
LI89_20135	PF01488	Shikimate / quinate 5-dehydrogenase
LI89_20135	PF08501	Shikimate dehydrogenase substrate binding domain
LI89_20140	PF01300	Telomere recombination
LI89_20145	PF01396	LI89_20145
LI89_20150	PF04361	LI89_20150
LI89_20155	PF02481	DNA recombination-mediator protein A
LI89_20160	PF01327	Polypeptide deformylase
LI89_20165	PF00551	Formyl transferase
LI89_20165	PF02911	Formyl transferase, C-terminal domain
LI89_20170	PF01029	NusB family
LI89_20170	PF01189	NOL1/NOP2/sun family
LI89_20175	PF02080	TrkA-C domain
LI89_20175	PF02254	TrkA-N domain
LI89_20180	PF01741	Large-conductance mechanosensitive channel, MscL
LI89_20185	PF03889	LI89_20185
LI89_20190	PF13411	MerR HTH family regulatory protein
LI89_20195	PF09350	LI89_20195
LI89_20200	PF01196	Ribosomal protein L17
LI89_20205	PF01000	RNA polymerase Rpb3/RpoA insert domain
LI89_20205	PF01193	RNA polymerase Rpb3/Rpb11 dimerisation domain
LI89_20205	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
LI89_20210	PF00163	Ribosomal protein S4/S9 N-terminal domain
LI89_20210	PF01479	S4 domain
LI89_20215	PF00411	Ribosomal protein S11
LI89_20220	PF00416	Ribosomal protein S13/S18
LI89_20225	PF00444	Ribosomal protein L36
LI89_20230	PF00344	SecY translocase
LI89_20235	PF00828	Ribosomal protein L18e/L15
LI89_20240	PF00327	Ribosomal protein L30p/L7e
LI89_20245	PF00333	Ribosomal protein S5, N-terminal domain
LI89_20245	PF03719	Ribosomal protein S5, C-terminal domain
LI89_20250	PF00861	Ribosomal L18p/L5e family
LI89_20255	PF00347	Ribosomal protein L6
LI89_20260	PF00410	Ribosomal protein S8
LI89_20265	PF00253	Ribosomal protein S14p/S29e
LI89_20270	PF00281	Ribosomal protein L5
LI89_20270	PF00673	ribosomal L5P family C-terminus
LI89_20275	PF00467	KOW motif
LI89_20275	PF17136	LI89_20275
LI89_20280	PF00238	Ribosomal protein L14p/L23e
LI89_20285	PF00366	Ribosomal protein S17
LI89_20290	PF00831	Ribosomal L29 protein
LI89_20295	PF00252	Ribosomal protein L16p/L10e
LI89_20300	PF00189	Ribosomal protein S3, C-terminal domain
LI89_20300	PF07650	KH domain
LI89_20305	PF00237	Ribosomal protein L22p/L17e
LI89_20310	PF00203	Ribosomal protein S19
LI89_20315	PF00181	Ribosomal Proteins L2, RNA binding domain
LI89_20315	PF03947	Ribosomal Proteins L2, C-terminal domain
LI89_20320	PF00276	Ribosomal protein L23
LI89_20325	PF00573	Ribosomal protein L4/L1 family
LI89_20330	PF00297	Ribosomal protein L3
LI89_20335	PF00338	Ribosomal protein S10p/S20e
LI89_20340	PF00210	Ferritin-like domain
LI89_20345	PF04324	BFD-like [2Fe-2S] binding domain
LI89_20350	PF00009	Elongation factor Tu GTP binding domain
LI89_20350	PF03143	Elongation factor Tu C-terminal domain
LI89_20350	PF03144	Elongation factor Tu domain 2
LI89_20355	PF00009	Elongation factor Tu GTP binding domain
LI89_20355	PF00679	Elongation factor G C-terminus
LI89_20355	PF03144	Elongation factor Tu domain 2
LI89_20355	PF03764	Elongation factor G, domain IV
LI89_20355	PF14492	Elongation Factor G, domain II
LI89_20360	PF00177	Ribosomal protein S7p/S5e
LI89_20365	PF00164	Ribosomal protein S12/S23
LI89_20370	PF04077	DsrH like protein
LI89_20375	PF02635	DsrE/DsrF-like family
LI89_20380	PF02635	DsrE/DsrF-like family
LI89_20385	PF08348	LI89_20385
LI89_20385	PF13309	LI89_20385
LI89_20390	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
LI89_20390	PF01346	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
LI89_20395	PF04102	SlyX
LI89_20400	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
LI89_20405	PF09526	LI89_20405
LI89_20410	PF00999	Sodium/hydrogen exchanger family
LI89_20410	PF02254	TrkA-N domain
LI89_20415	PF02525	Flavodoxin-like fold
LI89_20420	PF00005	ABC transporter
LI89_20420	PF12848	ABC transporter
LI89_20425	PF00535	Glycosyl transferase family 2
LI89_20430	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
LI89_20435	PF02668	Taurine catabolism dioxygenase TauD, TfdA family
LI89_20440	PF00528	Binding-protein-dependent transport system inner membrane component
LI89_20445	PF00005	ABC transporter
LI89_20450	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
LI89_20455	PF02567	Phenazine biosynthesis-like protein
LI89_20460	PF01810	LI89_20460
LI89_20465	PF00561	alpha/beta hydrolase fold
LI89_20470	PF06794	Uncharacterised protein family (UPF0270)
LI89_20475	PF00485	Phosphoribulokinase / Uridine kinase family
LI89_20480	PF02566	OsmC-like protein
LI89_20485	PF00027	Cyclic nucleotide-binding domain
LI89_20485	PF00325	Bacterial regulatory proteins, crp family
LI89_20490	PF12805	LI89_20490
LI89_20490	PF13515	LI89_20490
LI89_20495	PF00202	Aminotransferase class-III
LI89_20500	PF00117	Glutamine amidotransferase class-I
LI89_20505	PF05872	LI89_20505
LI89_20510	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
LI89_20515	PF02056	Family 4 glycosyl hydrolase
LI89_20515	PF11975	Family 4 glycosyl hydrolase C-terminal domain
LI89_20520	PF00356	Bacterial regulatory proteins, lacI family
LI89_20520	PF13377	Periplasmic binding protein-like domain
LI89_20525	PF07690	Major Facilitator Superfamily
LI89_20530	PF07969	Amidohydrolase family
LI89_20535	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
LI89_20535	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
LI89_20535	PF04324	BFD-like [2Fe-2S] binding domain
LI89_20535	PF07992	Pyridine nucleotide-disulphide oxidoreductase
LI89_20540	PF13806	Rieske-like [2Fe-2S] domain
LI89_20545	PF01226	Formate/nitrite transporter
LI89_20550	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
LI89_20550	PF10414	Sirohaem synthase dimerisation region
LI89_20550	PF13241	Putative NAD(P)-binding
LI89_20550	PF14824	Sirohaem biosynthesis protein central
LI89_20555	PF00579	tRNA synthetases class I (W and Y)
LI89_20560	PF13419	Haloacid dehalogenase-like hydrolase
LI89_20565	PF00834	Ribulose-phosphate 3 epimerase family
LI89_20570	PF02086	D12 class N6 adenine-specific DNA methyltransferase
LI89_20575	PF05036	Sporulation related domain
LI89_20580	PF01761	3-dehydroquinate synthase
LI89_20585	PF01202	Shikimate kinase
LI89_20590	PF00263	LI89_20590
LI89_20590	PF03958	Bacterial type II/III secretion system short domain
LI89_20595	PF10748	LI89_20595
LI89_20605	PF05137	LI89_20605
LI89_20610	PF11104	Type IV pilus assembly protein PilM;
LI89_20615	PF00905	Penicillin binding protein transpeptidase domain
LI89_20615	PF00912	Transglycosylase
LI89_20615	PF17092	LI89_20615
LI89_20620	PF00293	NUDIX domain
LI89_20625	PF07095	Intracellular growth attenuator protein IgaA
LI89_20630	PF13419	Haloacid dehalogenase-like hydrolase
LI89_20635	PF01479	S4 domain
LI89_20640	PF01430	Hsp33 protein
LI89_20645	PF01293	Phosphoenolpyruvate carboxykinase
LI89_20650	PF00512	His Kinase A (phospho-acceptor) domain
LI89_20650	PF00672	HAMP domain
LI89_20650	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
LI89_20655	PF00072	Response regulator receiver domain
LI89_20655	PF00486	Transcriptional regulatory protein, C terminal
LI89_20660	PF01272	Transcription elongation factor, GreA/GreB, C-term
LI89_20660	PF03449	Transcription elongation factor, N-terminal
LI89_20665	PF00575	S1 RNA binding domain
LI89_20665	PF09371	Tex-like protein N-terminal domain
LI89_20665	PF12836	Helix-hairpin-helix motif
LI89_20665	PF16921	LI89_20665
LI89_20670	PF04023	FeoA domain
LI89_20675	PF02421	Ferrous iron transport protein B
LI89_20675	PF07664	LI89_20675
LI89_20675	PF07670	Nucleoside recognition
LI89_20680	PF09012	FeoC like transcriptional regulator
LI89_20685	PF07338	Protein of unknown function (DUF1471)
LI89_20690	PF00561	alpha/beta hydrolase fold
LI89_20700	PF01106	NifU-like domain
LI89_20700	PF01521	Iron-sulphur cluster biosynthesis
LI89_20705	PF02446	4-alpha-glucanotransferase
LI89_20710	PF00343	Carbohydrate phosphorylase
LI89_20715	PF00196	Bacterial regulatory proteins, luxR family
LI89_20725	PF00581	Rhodanese-like domain
LI89_20730	PF01694	Rhomboid family
LI89_20730	PF12122	Protein of unknown function (DUF3582)
LI89_20735	PF00455	LI89_20735
LI89_20735	PF08220	DeoR-like helix-turn-helix domain
LI89_20745	PF01266	FAD dependent oxidoreductase
LI89_20745	PF16901	LI89_20745
LI89_20750	PF00343	Carbohydrate phosphorylase
LI89_20755	PF00534	Glycosyl transferases group 1
LI89_20755	PF08323	Starch synthase catalytic domain
LI89_20760	PF00483	Nucleotidyl transferase
LI89_20765	PF00128	Alpha amylase, catalytic domain
LI89_20765	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
LI89_20770	PF00128	Alpha amylase, catalytic domain
LI89_20770	PF02806	Alpha amylase, C-terminal all-beta domain
LI89_20770	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
LI89_20775	PF06580	LI89_20775
LI89_20775	PF07694	5TMR of 5TMR-LYT
LI89_20780	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
LI89_20780	PF03466	LysR substrate binding domain
LI89_20785	PF03306	Alpha-acetolactate decarboxylase
LI89_20790	PF00205	Thiamine pyrophosphate enzyme, central domain
LI89_20790	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
LI89_20790	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
LI89_20795	PF01118	Semialdehyde dehydrogenase, NAD binding domain
LI89_20795	PF02774	Semialdehyde dehydrogenase, dimerisation domain
LI89_20800	PF01914	LI89_20800
LI89_20805	PF01202	Shikimate kinase
LI89_20810	PF02447	LI89_20810
LI89_20815	PF00356	Bacterial regulatory proteins, lacI family
LI89_20815	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
LI89_20820	PF02678	Pirin
LI89_20825	PF00583	Acetyltransferase (GNAT) family
LI89_20830	PF01261	Xylose isomerase-like TIM barrel
LI89_20835	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
LI89_20835	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
LI89_20840	PF00205	Thiamine pyrophosphate enzyme, central domain
LI89_20840	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
LI89_20840	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
LI89_20845	PF00294	pfkB family carbohydrate kinase
LI89_20845	PF09863	Uncharacterized protein conserved in bacteria (DUF2090)
LI89_20850	PF01380	SIS domain
LI89_20850	PF01418	Helix-turn-helix domain, rpiR family
LI89_20855	PF04962	KduI/IolB family
LI89_20860	PF00171	Aldehyde dehydrogenase family
LI89_20865	PF01261	Xylose isomerase-like TIM barrel
LI89_20870	PF07690	Major Facilitator Superfamily
LI89_20875	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
LI89_20875	PF03466	LysR substrate binding domain
LI89_20885	PF08282	haloacid dehalogenase-like hydrolase
LI89_20890	PF02572	ATP:corrinoid adenosyltransferase BtuR/CobO/CobP
LI89_20895	PF05681	LI89_20895
LI89_20895	PF05683	Fumarase C-terminus
LI89_20900	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
LI89_20900	PF03466	LysR substrate binding domain
LI89_20910	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
LI89_20915	PF00288	GHMP kinases N terminal domain
LI89_20920	PF02310	B12 binding domain
LI89_20925	PF13941	LI89_20925
LI89_20930	PF06368	Methylaspartate mutase E chain (MutE)
LI89_20935	PF05034	Methylaspartate ammonia-lyase N-terminus
LI89_20935	PF07476	Methylaspartate ammonia-lyase C-terminus
LI89_20940	PF07287	LI89_20940
LI89_20945	PF14330	LI89_20945
LI89_20950	PF00375	Sodium:dicarboxylate symporter family
LI89_20955	PF03486	HI0933-like protein
LI89_20960	PF01384	LI89_20960
LI89_20965	PF10625	LI89_20965
LI89_20970	PF00582	Universal stress protein family
LI89_20975	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
LI89_20975	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
LI89_20980	PF00413	Matrixin
LI89_20980	PF08548	Peptidase M10 serralysin C terminal
LI89_20985	PF04445	Putative SAM-dependent methyltransferase
LI89_20990	PF01432	Peptidase family M3
LI89_20995	PF04378	Ribosomal RNA small subunit methyltransferase D, RsmJ
LI89_21000	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
LI89_21000	PF07992	Pyridine nucleotide-disulphide oxidoreductase
LI89_21015	PF07507	LI89_21015
LI89_21020	PF05045	LI89_21020
LI89_21035	PF01061	LI89_21035
LI89_21050	PF13419	Haloacid dehalogenase-like hydrolase
LI89_21060	PF00483	Nucleotidyl transferase
LI89_21065	PF00908	dTDP-4-dehydrorhamnose 3,5-epimerase
LI89_21070	PF04321	RmlD substrate binding domain
LI89_21075	PF00535	Glycosyl transferase family 2
LI89_21100	PF00892	EamA-like transporter family
LI89_21105	PF01381	Helix-turn-helix
LI89_21110	PF08240	Alcohol dehydrogenase GroES-like domain
LI89_21110	PF13602	Zinc-binding dehydrogenase
LI89_21115	PF03212	Pertactin
LI89_21115	PF03797	Autotransporter beta-domain
LI89_21120	PF03631	LI89_21120
LI89_21125	PF02611	CDP-diacylglycerol pyrophosphatase
LI89_21130	PF05170	LI89_21130
LI89_21135	PF00563	EAL domain
LI89_21140	PF01361	Tautomerase enzyme
LI89_21145	PF00294	pfkB family carbohydrate kinase
LI89_21150	PF00675	Insulinase (Peptidase family M16)
LI89_21150	PF05193	Peptidase M16 inactive domain
LI89_21155	PF00375	Sodium:dicarboxylate symporter family
LI89_21160	PF00754	F5/8 type C domain
LI89_21165	PF06917	Periplasmic pectate lyase
LI89_21170	PF06178	Oligogalacturonate-specific porin protein (KdgM)
LI89_21175	PF00563	EAL domain
LI89_21175	PF17154	LI89_21175
LI89_21180	PF05420	LI89_21180
LI89_21180	PF13432	Tetratricopeptide repeat
LI89_21180	PF14559	Tetratricopeptide repeat
LI89_21185	PF01270	Glycosyl hydrolases family 8
LI89_21190	PF03170	Bacterial cellulose synthase subunit
LI89_21195	PF00535	Glycosyl transferase family 2
LI89_21195	PF03552	Cellulose synthase
LI89_21195	PF07238	PilZ domain
LI89_21205	PF06564	YhjQ protein
LI89_21210	PF10945	LI89_21210
LI89_21215	PF10995	LI89_21215
LI89_21220	PF11120	LI89_21220
LI89_21225	PF11658	LI89_21225
LI89_21230	PF00005	ABC transporter
LI89_21230	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
LI89_21235	PF00005	ABC transporter
LI89_21235	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
LI89_21240	PF00528	Binding-protein-dependent transport system inner membrane component
LI89_21240	PF12911	LI89_21240
LI89_21245	PF00528	Binding-protein-dependent transport system inner membrane component
LI89_21250	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
LI89_21255	PF05860	haemagglutination activity domain
LI89_21260	PF03865	Haemolysin secretion/activation protein ShlB/FhaC/HecB
LI89_21260	PF08479	POTRA domain, ShlB-type
LI89_21260	PF17287	LI89_21260
LI89_21265	PF05860	haemagglutination activity domain
LI89_21275	PF07690	Major Facilitator Superfamily
LI89_21280	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
LI89_21280	PF05231	LI89_21280
LI89_21280	PF07730	Histidine kinase
LI89_21285	PF00072	Response regulator receiver domain
LI89_21285	PF00196	Bacterial regulatory proteins, luxR family
LI89_21290	PF00884	Sulfatase
LI89_21290	PF08019	LI89_21290
LI89_21295	PF02566	OsmC-like protein
LI89_21300	PF12146	Putative lysophospholipase
LI89_21305	PF00324	Amino acid permease
LI89_21310	PF00221	Aromatic amino acid lyase
LI89_21315	PF01175	Urocanase
LI89_21315	PF17391	LI89_21315
LI89_21315	PF17392	LI89_21315
LI89_21330	PF00577	Outer membrane usher protein
LI89_21330	PF13953	PapC C-terminal domain
LI89_21330	PF13954	PapC N-terminal domain
LI89_21335	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
LI89_21355	PF01238	Phosphomannose isomerase type I
LI89_21360	PF00232	Glycosyl hydrolase family 1
LI89_21365	PF16990	LI89_21365
LI89_21370	PF02264	LamB porin
LI89_21375	PF02378	Phosphotransferase system, EIIC
LI89_21380	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
LI89_21385	PF02378	Phosphotransferase system, EIIC
LI89_21390	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit
LI89_21395	PF00480	ROK family
LI89_21400	PF00356	Bacterial regulatory proteins, lacI family
LI89_21400	PF13377	Periplasmic binding protein-like domain
LI89_21405	PF13673	Acetyltransferase (GNAT) domain
LI89_21410	PF03288	Poxvirus D5 protein-like
LI89_21410	PF08273	Zinc-binding domain of primase-helicase
LI89_21410	PF08706	LI89_21410
LI89_21410	PF13362	Toprim domain
LI89_21415	PF17345	LI89_21415
LI89_21425	PF10554	LI89_21425
LI89_21435	PF05930	Prophage CP4-57 regulatory protein (AlpA)
LI89_21450	PF11185	LI89_21450
LI89_21455	PF00589	Phage integrase family
LI89_21455	PF13356	Domain of unknown function (DUF4102)
LI89_21460	PF12833	Helix-turn-helix domain
LI89_21460	PF13377	Periplasmic binding protein-like domain
LI89_21465	PF02653	LI89_21465
LI89_21470	PF00005	ABC transporter
LI89_21475	PF13407	Periplasmic binding protein domain
LI89_21485	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
LI89_21485	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
LI89_21490	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
LI89_21490	PF02753	Pili assembly chaperone PapD, C-terminal domain
LI89_21500	PF00857	Isochorismatase family
LI89_21505	PF01965	DJ-1/PfpI family
LI89_21505	PF12833	Helix-turn-helix domain
LI89_21510	PF01757	LI89_21510
LI89_21515	PF07690	Major Facilitator Superfamily
LI89_21520	PF00009	Elongation factor Tu GTP binding domain
LI89_21520	PF09106	Elongation factor SelB, winged helix
LI89_21520	PF09107	Elongation factor SelB, winged helix
LI89_21525	PF03841	L-seryl-tRNA selenium transferase
LI89_21525	PF12390	LI89_21525
LI89_21530	PF04216	Protein involved in formate dehydrogenase formation
LI89_21535	PF01292	Prokaryotic cytochrome b561
LI89_21540	PF09163	Formate dehydrogenase N, transmembrane
LI89_21540	PF13247	4Fe-4S dicluster domain
LI89_21545	PF00384	Molybdopterin oxidoreductase
LI89_21545	PF01568	Molydopterin dinucleotide binding domain
LI89_21550	PF00384	Molybdopterin oxidoreductase
LI89_21550	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
LI89_21555	PF02634	FdhD/NarQ family
LI89_21560	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
LI89_21560	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
LI89_21565	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
LI89_21565	PF00672	HAMP domain
LI89_21565	PF16591	LI89_21565
LI89_21570	PF03473	MOSC domain
LI89_21570	PF03475	3-alpha domain
LI89_21575	PF01850	PIN domain
LI89_21580	PF04014	Antidote-toxin recognition MazE
LI89_21585	PF10928	Protein of unknown function (DUF2810)
LI89_21590	PF00155	Aminotransferase class I and II
LI89_21590	PF00392	Bacterial regulatory proteins, gntR family
LI89_21595	PF01810	LI89_21595
LI89_21600	PF05068	Mannitol repressor
LI89_21605	PF01232	Mannitol dehydrogenase Rossmann domain
LI89_21605	PF08125	Mannitol dehydrogenase C-terminal domain
LI89_21610	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
LI89_21610	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
LI89_21610	PF02378	Phosphotransferase system, EIIC
LI89_21615	PF11254	LI89_21615
LI89_21620	PF02092	LI89_21620
LI89_21620	PF05746	DALR anticodon binding domain
LI89_21625	PF02091	Glycyl-tRNA synthetase alpha subunit
LI89_21630	PF03352	Methyladenine glycosylase
LI89_21635	PF13673	Acetyltransferase (GNAT) domain
LI89_21650	PF00691	OmpA family
LI89_21650	PF13488	LI89_21650
LI89_21660	PF07690	Major Facilitator Superfamily
LI89_21665	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
LI89_21665	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
LI89_21670	PF00128	Alpha amylase, catalytic domain
LI89_21675	PF00155	Aminotransferase class I and II
LI89_21680	PF02080	TrkA-C domain
LI89_21680	PF06826	LI89_21680
LI89_21685	PF00011	Hsp20/alpha crystallin family
LI89_21690	PF00011	Hsp20/alpha crystallin family
LI89_21695	PF07119	LI89_21695
LI89_21700	PF07676	WD40-like Beta Propeller Repeat
LI89_21700	PF12566	LI89_21700
LI89_21705	PF00291	Pyridoxal-phosphate dependent enzyme
LI89_21710	PF02423	Ornithine cyclodeaminase/mu-crystallin family
LI89_21715	PF00480	ROK family
LI89_21720	PF08282	haloacid dehalogenase-like hydrolase
LI89_21725	PF00204	DNA gyrase B
LI89_21725	PF00986	DNA gyrase B subunit, carboxyl terminus
LI89_21725	PF01751	Toprim domain
LI89_21725	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
LI89_21730	PF02463	RecF/RecN/SMC N terminal domain
LI89_21735	PF00712	DNA polymerase III beta subunit, N-terminal domain
LI89_21735	PF02767	DNA polymerase III beta subunit, central domain
LI89_21735	PF02768	DNA polymerase III beta subunit, C-terminal domain
LI89_21740	PF00308	Bacterial dnaA  protein
LI89_21740	PF08299	Bacterial dnaA protein helix-turn-helix
LI89_21740	PF11638	DnaA N-terminal domain
LI89_21745	PF00468	Ribosomal protein L34
LI89_21750	PF00825	Ribonuclease P
LI89_21755	PF02096	60Kd inner membrane protein
LI89_21755	PF14849	YidC periplasmic domain
LI89_21760	PF01926	50S ribosome-binding GTPase
LI89_21760	PF10396	GTP-binding protein TrmE N-terminus
LI89_21760	PF12631	Catalytic cysteine-containing C-terminus of GTPase, MnmE
LI89_21765	PF07055	Enoyl reductase FAD binding domain
LI89_21765	PF12241	Trans-2-enoyl-CoA reductase catalytic region
LI89_21765	PF12242	NAD(P)H binding domain of trans-2-enoyl-CoA reductase
LI89_21770	PF03180	NLPA lipoprotein
LI89_21775	PF00005	ABC transporter
LI89_21775	PF09383	NIL domain
LI89_21780	PF00528	Binding-protein-dependent transport system inner membrane component
LI89_21785	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
LI89_21785	PF02743	Cache domain
LI89_21790	PF03358	NADPH-dependent FMN reductase
LI89_21795	PF00512	His Kinase A (phospho-acceptor) domain
LI89_21795	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
LI89_21800	PF00072	Response regulator receiver domain
LI89_21800	PF00196	Bacterial regulatory proteins, luxR family
LI89_21805	PF03928	Domain of unknown function (DUF336)
LI89_21810	PF00860	Permease family
LI89_21815	PF13419	Haloacid dehalogenase-like hydrolase
LI89_21820	PF00528	Binding-protein-dependent transport system inner membrane component
LI89_21825	PF00528	Binding-protein-dependent transport system inner membrane component
LI89_21830	PF00497	Bacterial extracellular solute-binding proteins, family 3
LI89_21835	PF04519	LI89_21835
LI89_21840	PF01895	PhoU domain
LI89_21845	PF00005	ABC transporter
LI89_21850	PF00528	Binding-protein-dependent transport system inner membrane component
LI89_21855	PF00528	Binding-protein-dependent transport system inner membrane component
LI89_21860	PF12849	PBP superfamily domain
LI89_21865	PF01380	SIS domain
LI89_21865	PF13522	Glutamine amidotransferase domain
LI89_21870	PF00132	Bacterial transferase hexapeptide (six repeats)
LI89_21870	PF12804	MobA-like NTP transferase domain
LI89_21875	PF00401	ATP synthase, Delta/Epsilon chain, long alpha-helix domain
LI89_21875	PF02823	ATP synthase, Delta/Epsilon chain, beta-sandwich domain
LI89_21880	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
LI89_21880	PF02874	ATP synthase alpha/beta family, beta-barrel domain
LI89_21885	PF00231	ATP synthase
LI89_21890	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
LI89_21890	PF00306	ATP synthase alpha/beta chain, C terminal domain
LI89_21890	PF02874	ATP synthase alpha/beta family, beta-barrel domain
LI89_21895	PF00213	ATP synthase delta (OSCP) subunit
LI89_21900	PF00430	ATP synthase B/B' CF(0)
LI89_21905	PF00137	ATP synthase subunit C
LI89_21910	PF00119	ATP synthase A chain
LI89_21915	PF03899	LI89_21915
LI89_21920	PF02527	rRNA small subunit methyltransferase G
LI89_21925	PF01134	Glucose inhibited division protein A
LI89_21925	PF13932	GidA associated domain 3
LI89_21955	PF01292	Prokaryotic cytochrome b561
LI89_21960	PF01545	Cation efflux family
LI89_21960	PF16916	LI89_21960
LI89_21965	PF00239	Resolvase, N terminal domain
LI89_21970	PF01526	LI89_21970
LI89_21970	PF13700	LI89_21970
LI89_21975	PF01548	LI89_21975
LI89_21975	PF02371	LI89_21975
LI89_22025	PF08535	KorB domain
LI89_22030	PF13614	AAA domain
LI89_22065	PF10411	Disulfide bond isomerase protein N-terminus
LI89_22065	PF13098	Thioredoxin-like domain
LI89_22080	PF05309	LI89_22080
LI89_22085	PF06586	LI89_22085
LI89_22090	PF03743	Bacterial conjugation TrbI-like protein
LI89_22095	PF09676	LI89_22095
LI89_22100	PF01935	Domain of unknown function DUF87
LI89_22100	PF11130	LI89_22100
LI89_22120	PF06834	LI89_22120
LI89_22125	PF09673	LI89_22125
LI89_22140	PF13728	F plasmid transfer operon protein
LI89_22145	PF06122	LI89_22145
LI89_22150	PF07916	LI89_22150
LI89_22175	PF07751	LI89_22175
LI89_22180	PF05638	Protein of unknown function (DUF796)
LI89_22215	PF04471	Restriction endonuclease
LI89_22215	PF12358	LI89_22215
LI89_22220	PF01526	LI89_22220
LI89_22220	PF13700	LI89_22220
LI89_22225	PF00239	Resolvase, N terminal domain
LI89_22225	PF02796	Helix-turn-helix domain of resolvase
LI89_22235	PF01548	LI89_22235
LI89_22235	PF02371	LI89_22235
LI89_22240	PF00455	LI89_22240
LI89_22240	PF08220	DeoR-like helix-turn-helix domain
LI89_22245	PF03830	PTS system sorbose subfamily IIB component
LI89_22250	PF03609	LI89_22250
LI89_22255	PF03613	LI89_22255
LI89_22260	PF03610	PTS system fructose IIA component
LI89_22265	PF07470	Glycosyl Hydrolase Family 88
LI89_22270	PF10022	LI89_22270
LI89_22280	PF02278	Polysaccharide lyase family 8, super-sandwich domain
LI89_22280	PF02884	Polysaccharide lyase family 8, C-terminal beta-sandwich domain
LI89_22280	PF08124	Polysaccharide lyase family 8, N terminal alpha-helical domain
LI89_22285	PF03797	Autotransporter beta-domain
LI89_22295	PF00589	Phage integrase family
LI89_22305	PF00816	H-NS histone family
LI89_22330	PF04471	Restriction endonuclease
LI89_22385	PF01381	Helix-turn-helix
LI89_22390	PF05973	LI89_22390
LI89_22395	PF12083	LI89_22395
LI89_22405	PF00145	C-5 cytosine-specific DNA methylase
LI89_22425	PF01548	LI89_22425
LI89_22425	PF02371	LI89_22425
LI89_22430	PF01548	LI89_22430
LI89_22430	PF02371	LI89_22430
LI89_22435	PF01292	Prokaryotic cytochrome b561
LI89_22440	PF01545	Cation efflux family
LI89_22440	PF16916	LI89_22440
LI89_22445	PF00239	Resolvase, N terminal domain