locus_tag old_locus_tag gene Name start end strand product note type ID NCBI LI89_00005 LI89_00005 LI89_00005 270 710 - FMN-binding protein MioC An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group gene gene0 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00005 LI89_00010 LI89_00010 LI89_00010 802 1263 - transcriptional regulator transcriptional repressor of asnA which codes for aspartate-ammonia ligase gene gene1 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00010 LI89_00015 LI89_00015 LI89_00015 1449 2441 + asparagine synthetase AsnA catalyzes the formation of asparagine from aspartate and ammonia gene gene2 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00015 LI89_00020 LI89_00020 LI89_00020 2592 3263 + membrane protein gene gene3 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00020 LI89_00025 LI89_00025 LI89_00025 3290 4756 - hypothetical protein contains a von Willibrand factor type A domain%3B stimulates the ATPase activity of RavA gene gene4 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00025 LI89_00030 LI89_00030 LI89_00030 4760 6268 - ATPase interacts with LdcI%2C lysine decarboxylase%3B may be active in late log/ early stationary phase gene gene5 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00030 LI89_00035 LI89_00035 trkD trkD 6578 8449 + potassium transport protein Kup Responsible for the low-affinity transport of potassium into the cell%3B involved in potassium ion uptake under hyper-osmotic stress at a low pH gene gene6 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00035 LI89_00040 LI89_00040 LI89_00040 8797 9216 + D-ribose pyranase cytoplasmic mutarotase that catalyzes the conversion between beta-pyran and beta-furan forms of D-ribose%3B RbsD is required for efficient ribose utilization in E. coli%3B rbsD-mutant E. coli strains are unable to use ribose as a sole carbon source gene gene7 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00040 LI89_00045 LI89_00045 LI89_00045 9224 10756 + sugar ABC transporter ATP-binding protein gene gene8 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00045 LI89_00050 LI89_00050 rbsC rbsC 10753 11721 + ribose ABC transporter permease functions to transport ribose at high affinity%3B forms a complex with RbsA2C2B gene gene9 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00050 LI89_00055 LI89_00055 LI89_00055 11748 12635 + D-ribose transporter subunit RbsB periplasmic substrate-binding component of the ATP-dependent ribose transport system gene gene10 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00055 LI89_00060 LI89_00060 LI89_00060 12744 13670 + ribokinase catalyzes the formation of D-ribose 5-phosphate from ribose gene gene11 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00060 LI89_00065 LI89_00065 LI89_00065 13673 14674 + transcriptional regulator binds to the purF operator and coregulates other genes for de novo purine nucleotide synthesis%3B is involved in regulation of purB%2C purC%2C purEK%2C purHD%2C purL%2C purMN and guaBA expression%3B binds hypoxanthine and guanine as inducers gene gene12 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00065 LI89_00070 LI89_00070 LI89_00070 14671 16095 - major facilitator transporter gene gene13 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00070 LI89_00075 LI89_00075 LI89_00075 16170 16859 - GntR family transcriptional regulator gene gene14 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00075 LI89_00080 LI89_00080 LI89_00080 17409 18957 + 16S ribosomal RNA rRNA gene15 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00080 LI89_00085 LI89_00085 LI89_00085 19090 19165 + tRNA-Glu tRNA gene16 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00085 LI89_00090 LI89_00090 LI89_00090 19400 22333 + 23S ribosomal RNA rRNA gene17 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00090 LI89_00095 LI89_00095 LI89_00095 22427 22542 + 5S ribosomal RNA rRNA gene18 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00095 LI89_00100 LI89_00100 LI89_00100 22704 23231 - molybdopterin-guanine dinucleotide biosynthesis protein B in Escherichia coli the MobB protein is not essential but has been found to interact with multiple proteins involved in the molybdopterin guanine dinucleotide cofactor biosynthesis pathway gene gene19 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00100 LI89_00105 LI89_00105 mobA mobA 23228 23818 - molybdopterin-guanine dinucleotide biosynthesis protein MobA in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis gene gene20 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00105 LI89_00110 LI89_00110 LI89_00110 23972 24241 + hypothetical protein gene gene21 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00110 LI89_00115 LI89_00115 LI89_00115 24332 25318 + serine/threonine protein kinase catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro%3B specific substrate in vivo has not been identified yet%3B plays a role in long-term cell survival and expression of surface appendages gene gene22 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00115 LI89_00120 LI89_00120 LI89_00120 25346 25969 + protein disulfide isomerase gene gene23 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00120 LI89_00125 LI89_00125 LI89_00125 26560 29358 + DNA polymerase I has 3'-5' exonuclease%2C 5'-3' exonuclease and 5'-3'polymerase activities%2C primarily functions to fill gaps during DNA replication and repair gene gene24 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00125 LI89_00130 LI89_00130 LI89_00130 29793 30446 - GTP-binding protein gene gene25 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00130 LI89_00135 LI89_00135 LI89_00135 31224 31790 + GTPase activator gene gene26 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00135 LI89_00140 LI89_00140 LI89_00140 31973 33346 + coproporphyrinogen III oxidase catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III gene gene27 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00140 LI89_00145 LI89_00145 glnG glnG 33388 34800 - nitrogen regulation protein NR(I) response regulator of a two-component regulatory system involved in the activation of nitrogen assimilation genes%3B interacts with sigma-54 gene gene28 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00145 LI89_00150 LI89_00150 glnL glnL 34808 35857 - nitrogen regulation protein NR(II) sensory histidine kinase in two-component regulatory system with GlnG%3B acts as a signal transducer which responds to the nitrogen level of cell and modulates the activity of ntrC by phosphorylation/dephosphorylation gene gene29 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00150 LI89_00155 LI89_00155 glnA glnA 36012 37421 - glutamine synthetase forms a homododecamer%3B forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate%3B also functions in the assimilation of ammonia%3B highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltransferase from specific tyrosine residues%3B addition of adenylyl groups results in inactivation of the enzyme gene gene30 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00155 LI89_00160 LI89_00160 LI89_00160 37923 39746 + GTP-binding protein TypA gene gene31 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00160 LI89_00165 LI89_00165 LI89_00165 39957 40544 + alpha-D-glucose-1-phosphatase gene gene32 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00165 LI89_00170 LI89_00170 LI89_00170 40632 41522 + hypothetical protein gene gene33 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00170 LI89_00175 LI89_00175 LI89_00175 41529 41966 + D-tyrosyl-tRNA(Tyr) deacylase hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr)%3B possible defense mechanism against a harmful effect of D-tyrosine gene gene34 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00175 LI89_00180 LI89_00180 LI89_00180 42039 42962 + hypothetical protein gene gene35 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00180 LI89_00185 LI89_00185 LI89_00185 43289 43534 + transcriptional regulator gene gene36 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00185 LI89_00190 LI89_00190 LI89_00190 43547 44242 + LuxR family transcriptional regulator gene gene37 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00190 LI89_00195 LI89_00195 LI89_00195 44273 44965 + LuxR family transcriptional regulator gene gene38 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00195 LI89_00200 LI89_00200 LI89_00200 44991 45677 + LuxR family transcriptional regulator gene gene39 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00200 LI89_00205 LI89_00205 LI89_00205 45774 47483 - hypothetical protein gene gene40 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00205 LI89_00210 LI89_00210 LI89_00210 47630 49015 - xanthine permease XanP high-affinity transporter for xanthine gene gene41 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00210 LI89_00215 LI89_00215 LI89_00215 49254 50468 + sodium:glutamate symporter is involved with the sodium-dependent uptake of glutamate gene gene42 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00215 LI89_00220 LI89_00220 LI89_00220 50537 52618 - ATP-dependent DNA helicase RecG catalyzes branch migration in Holliday junction intermediates gene gene43 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00220 LI89_00225 LI89_00225 LI89_00225 52619 53311 - tRNA guanosine-2'-O-methyltransferase specifically modifies tRNA at position G18 gene gene44 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00225 LI89_00230 LI89_00230 LI89_00230 53317 55419 - (p)ppGpp synthetase gene gene45 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00230 LI89_00235 LI89_00235 rpoZ rpoZ 55438 55713 - DNA-directed RNA polymerase subunit omega Promotes RNA polymerase assembly%3B latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits gene gene46 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00235 LI89_00240 LI89_00240 LI89_00240 55768 56391 - guanylate kinase gene gene47 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00240 LI89_00245 LI89_00245 ligB ligB 56674 58371 + NAD-dependent DNA ligase LigB this ligase is similar to LigA but it lacks the C-terminal BRCT domain%3B catalyzes strand joining of nicked DNA in the presence of a divalent cation and NAD+ gene gene48 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00245 LI89_00250 LI89_00250 LI89_00250 58388 59005 - membrane protein gene gene49 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00250 LI89_00255 LI89_00255 LI89_00255 59312 59776 + hypothetical protein gene gene50 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00255 LI89_00260 LI89_00260 LI89_00260 59872 61056 - nucleoside permease gene gene51 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00260 LI89_00265 LI89_00265 LI89_00265 61343 62209 + enoyl-CoA hydratase regulator of pathogenicity factor RpfF%3B involved in synthesis of a diffusible signal factor involved in the regulation of extracellular enzymes gene gene52 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00265 LI89_00270 LI89_00270 LI89_00270 62235 64229 - RNase II stability modulator c-di-GMP phosphodiesterase%3B probably degrades signalling molecule c-di-GMP gene gene53 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00270 LI89_00275 LI89_00275 LI89_00275 64565 64762 + hypothetical protein gene gene54 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00275 LI89_00280 LI89_00280 LI89_00280 64752 65582 - beta-lactamase gene gene55 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00280 LI89_00285 LI89_00285 LI89_00285 65984 66847 - hypothetical protein gene gene56 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00285 LI89_00290 LI89_00290 rph rph 66974 67690 + ribonuclease PH RNase PH%3B tRNA nucleotidyltransferase%3B forms hexamers in Bacillus subtilis%3B phosphoroltic 3'-5' exoribonuclease%3B involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs gene gene57 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00290 LI89_00295 LI89_00295 pyrE pyrE 67842 68483 + orotate phosphoribosyltransferase involved in fifth step of pyrimidine biosynthesis%3B converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate gene gene58 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00295 LI89_00300 LI89_00300 slmA slmA 68561 69157 - division inhibitor protein FtsZ binding protein%3B synthetically lethal with a defect in the Min system%3B this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly gene gene59 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00300 LI89_00305 LI89_00305 LI89_00305 69278 69736 - deoxyuridine 5'-triphosphate nucleotidohydrolase catalyzes the formation of dUMP from dUTP gene gene60 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00305 LI89_00310 LI89_00310 LI89_00310 69714 70946 - bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine%2C which is then decarboxylated to form 4'-phosphopantotheine gene gene61 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00310 LI89_00315 LI89_00315 LI89_00315 71139 71807 + hypothetical protein gene gene62 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00315 LI89_00320 LI89_00320 rpmB rpmB 72071 72307 + 50S ribosomal protein L28 required for 70S ribosome assembly gene gene63 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00320 LI89_00325 LI89_00325 rpmG rpmG 72319 72486 + 50S ribosomal protein L33 in Escherichia coli BM108%2C a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function%3B there are paralogous genes in several bacterial genomes%2C and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31%3B the proteins in this group lack the CXXC motif gene gene64 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00325 LI89_00330 LI89_00330 LI89_00330 72573 73382 + formamidopyrimidine-DNA glycosylase Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases gene gene65 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00330 LI89_00335 LI89_00335 LI89_00335 73385 73867 - phosphopantetheine adenylyltransferase gene gene66 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00335 LI89_00340 LI89_00340 LI89_00340 73864 74646 - lipopolysaccharide biosynthesis protein gene gene67 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00340 LI89_00345 LI89_00345 LI89_00345 74647 75924 - 3-deoxy-D-manno-octulosonic acid transferase catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A gene gene68 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00345 LI89_00350 LI89_00350 LI89_00350 76469 77434 - ADP-heptose--LPS heptosyltransferase gene gene69 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00350 LI89_00355 LI89_00355 LI89_00355 77434 78498 - ADP-heptose--LPS heptosyltransferase catalyzes the transfer of the second heptose to the heptosyl-KDO2 moiety of the lipopolysaccharide inner core gene gene70 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00355 LI89_00360 LI89_00360 rfaD rfaD 78529 79461 - ADP-L-glycero-D-manno-heptose-6-epimerase catalyzes the interconversion between ADP-D-glycero-beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose gene gene71 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00360 LI89_00365 LI89_00365 LI89_00365 79705 80916 + 2-amino-3-ketobutyrate CoA ligase catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine gene gene72 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00365 LI89_00370 LI89_00370 tdh tdh 80941 81966 + L-threonine 3-dehydrogenase converts threonine and NAD to 1%2C2-amino-3-oxobutanoate and NADH%3B functions in threonine catabolism gene gene73 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00370 LI89_00375 LI89_00375 LI89_00375 82031 83056 - sugar deacetylase gene gene74 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00375 LI89_00380 LI89_00380 LI89_00380 83080 84447 - peptidase M37 gene gene75 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00380 LI89_00385 LI89_00385 LI89_00385 84457 86004 - phosphoglyceromutase catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate gene gene76 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00385 LI89_00390 LI89_00390 LI89_00390 86246 86680 + hypothetical protein gene gene77 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00390 LI89_00395 LI89_00395 LI89_00395 86730 86978 + glutaredoxin gene gene78 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00395 LI89_00400 LI89_00400 LI89_00400 87070 87540 + preprotein translocase subunit SecB molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm%3B in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA gene gene79 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00400 LI89_00405 LI89_00405 LI89_00405 87540 88559 + glycerol-3-phosphate dehydrogenase gene gene80 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00405 LI89_00410 LI89_00410 cysE cysE 88685 89506 + serine acetyltransferase catalyzes the O-acetylation of serine gene gene81 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00410 LI89_00415 LI89_00415 LI89_00415 89700 90203 - rRNA methylase member of the SPOUT superfamily of RNA methyltransferases gene gene82 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00415 LI89_00420 LI89_00420 LI89_00420 90313 91473 + 6-O-methylguanine DNA methyltransferase regulates genes involved in the repair of alkylated DNA%3B repairs DNA containing 6-O-methylguanine gene gene83 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00420 LI89_00425 LI89_00425 cpxA cpxA 91543 92919 - two-component sensor protein part of two-component CpxA/CpxR system%3B senses envelope stress%3B upregulates a number of periplasmic folding and trafficking factors gene gene84 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00425 LI89_00430 LI89_00430 LI89_00430 92916 93614 - transcriptional regulator response regulator in two-component regulatory system with CpxA%3B part of the envelope stress response system gene gene85 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00430 LI89_00435 LI89_00435 cpxP cpxP 93802 94299 + periplasmic stress adaptor protein CpxP repressor of the Cpx envelope stress response pathway which occurs via periplasmic interactions with CpxA%3B CpxP is degraded by DegP protease especially in the presence of misfolded substrates gene gene86 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00435 LI89_00440 LI89_00440 fieF fieF 94431 95333 + ferrous iron transporter member of cation diffusion facilitator family%3B CDF%3B membrane-bound%3B induced by both zinc and iron%2C but does not induce resistance to zinc%3B can transport zinc(II) in a proton-dependent manner%3B instead this protein induces iron resistance%3B forms dimers gene gene87 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00440 LI89_00445 LI89_00445 LI89_00445 95583 96566 + 6-phosphofructokinase catalyzes the formation of D-fructose 1%2C6-bisphosphate from D-fructose 6-phosphate in glycolysis gene gene88 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00445 LI89_00450 LI89_00450 LI89_00450 96904 97893 + sulfate transporter subunit gene gene89 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00450 LI89_00455 LI89_00455 LI89_00455 98114 99013 + hypothetical protein gene gene90 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00455 LI89_00460 LI89_00460 LI89_00460 99034 99801 - triosephosphate isomerase Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate gene gene91 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00460 LI89_00465 LI89_00465 LI89_00465 99930 100535 - hypothetical protein gene gene92 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00465 LI89_00470 LI89_00470 LI89_00470 100694 101131 + membrane protein gene gene93 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00470 LI89_00475 LI89_00475 LI89_00475 101339 102085 - ferredoxin-NADP reductase gene gene94 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00475 LI89_00480 LI89_00480 emrD emrD 102430 103614 + multidrug resistance protein D multidrug efflux protein involved in adaptation to low energy shock gene gene95 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00480 LI89_00485 LI89_00485 LI89_00485 103767 104777 - fructose 1%2C6-bisphosphatase gene gene96 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00485 LI89_00490 LI89_00490 glpK glpK 104959 106482 - glycerol kinase Converts glycerol and ADP to glycerol-3-phosphate and ADP gene gene97 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00490 LI89_00495 LI89_00495 LI89_00495 106559 107407 - glycerol uptake facilitator GlpF involved in the transport of glycerol into the cell gene gene98 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00495 LI89_00500 LI89_00500 LI89_00500 107594 107878 + hypothetical protein gene gene99 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00500 LI89_00505 LI89_00505 LI89_00505 108018 108257 + septal ring assembly protein ZapB interacts with FisZ and is necessary for Z-ring formation gene gene100 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00505 LI89_00510 LI89_00510 LI89_00510 108602 109087 - ribonuclease activity regulator protein RraA regulator of RNase E%3B increases half-life and abundance of RNAs%3B interacts with RNase E possibly inhibiting catalytic activity gene gene101 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00510 LI89_00515 LI89_00515 LI89_00515 109218 110150 - 1%2C4-dihydroxy-2-naphthoate octaprenyltransferase catalyzes the formation of dimethylmenaquinone from 1%2C4-dihydroxy-2-naphthoate and octaprenyl diphosphate gene gene102 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00515 LI89_00520 LI89_00520 hslU hslU 110301 111632 - ATP-dependent protease ATP-binding subunit HslU heat shock protein involved in degradation of misfolded proteins gene gene103 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00520 LI89_00525 LI89_00525 LI89_00525 111669 112193 - ATP-dependent protease subunit HslV heat shock protein involved in degradation of misfolded proteins gene gene104 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00525 LI89_00530 LI89_00530 LI89_00530 112293 113162 - cell division protein FtsN gene gene105 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00530 LI89_00535 LI89_00535 LI89_00535 113228 114256 - transcriptional regulator gene gene106 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00535 LI89_00540 LI89_00540 LI89_00540 114498 116696 - primosome assembly protein PriA binding of PriA to forked DNA starts the assembly of the primosome%2C also possesses 3'-5' helicase activity gene gene107 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00540 LI89_00545 LI89_00545 rpmE rpmE 116982 117197 + 50S ribosomal protein L31 RpmE%3B there appears to be two types of ribosomal proteins L31 in bacterial genomes%3B some contain a CxxC motif while others do not%3B Bacillus subtilis has both types%3B the proteins in this cluster have the CXXC motif%3B RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth%3B expression of ytiA is controlled by a zinc-specific transcriptional repressor%3B RpmE contains one zinc ion and a CxxC motif is responsible for this binding%3B forms an RNP particle along with proteins L5%2C L18%2C and L25 and 5S rRNA%3B found crosslinked to L2 and L25 and EF-G%3B may be near the peptidyltransferase site of the 50S ribosome gene gene108 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00545 LI89_00550 LI89_00550 LI89_00550 117287 117604 - transcriptional repressor protein MetJ when combined with S-adenosylmethionine represses the expression of the methionine regulon and of proteins involved in S-adenosylmethionine synthesis gene gene109 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00550 LI89_00555 LI89_00555 LI89_00555 117980 119140 + cystathionine gamma-synthase catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine gene gene110 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00555 LI89_00560 LI89_00560 metL metL 119143 121578 + aspartate kinase multifunctional homodimeric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine%3B functions in a number of amino acid biosynthetic pathways gene gene111 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00560 LI89_00565 LI89_00565 metF metF 121820 122704 + 5%2C10-methylenetetrahydrofolate reductase MTHFR%3B catalyzes NADH-linked reduction of 5%2C10-methylenetetrahydrofolate to 5-methyltetrahydrofolate using FAD as a cofactor gene gene112 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00565 LI89_00570 LI89_00570 LI89_00570 123141 125777 - phosphoenolpyruvate carboxylase catalyzes the formation of oxaloacetate from phosphoenolpyruvate gene gene113 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00570 LI89_00575 LI89_00575 LI89_00575 126004 127185 - acetylornithine deacetylase catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine in arginine biosynthesis gene gene114 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00575 LI89_00580 LI89_00580 LI89_00580 127429 128433 + N-acetyl-gamma-glutamyl-phosphate reductase gene gene115 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00580 LI89_00585 LI89_00585 LI89_00585 128512 129285 + acetylglutamate kinase gene gene116 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00585 LI89_00590 LI89_00590 LI89_00590 129457 130830 + argininosuccinate lyase catalyzes the formation of arginine from (N-L-arginino)succinate gene gene117 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00590 LI89_00595 LI89_00595 LI89_00595 131394 133943 + TonB-dependent receptor gene gene118 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00595 LI89_00600 LI89_00600 LI89_00600 134123 134698 + hypothetical protein gene gene119 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00600 LI89_00605 LI89_00605 LI89_00605 134855 135535 + hypothetical protein gene gene120 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00605 LI89_00610 LI89_00610 LI89_00610 135594 136229 + hemophore gene gene121 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00610 LI89_00615 LI89_00615 LI89_00615 136284 136880 + hemophore gene gene122 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00615 LI89_00620 LI89_00620 LI89_00620 137084 138889 + peptidase gene gene123 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00620 LI89_00625 LI89_00625 LI89_00625 138933 140261 + hemolysin secretion protein D gene gene124 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00625 LI89_00630 LI89_00630 LI89_00630 140446 141138 + energy transducer TonB gene gene125 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00630 LI89_00635 LI89_00635 LI89_00635 141223 142671 - dihydrolipoamide dehydrogenase Catalyzes the oxidation of dihydrolipoamide to lipoamide gene gene126 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00635 LI89_00640 LI89_00640 LI89_00640 142750 143481 - glutathione peroxidase gene gene127 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00640 LI89_00645 LI89_00645 LI89_00645 143629 144561 + transcriptional regulator Activates the expression of a regulon of hydrogen peroxide-inducible genes such as katG%2C gor%2C ahpC%2C ahpF%2C oxyS%2C dps%2C fur and grxA gene gene128 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00645 LI89_00650 LI89_00650 LI89_00650 144544 145944 - pyridine nucleotide transhydrogenase catalyzes the conversion of NADPH to NADH gene gene129 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00650 LI89_00655 LI89_00655 LI89_00655 146162 146794 + transcriptional regulator negatively controls the expression of fabA and fabB%2C genes involved in the unsaturated fatty acid biosynthesis gene gene130 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00655 LI89_00660 LI89_00660 LI89_00660 146913 147287 + hypothetical protein gene gene131 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00660 LI89_00665 LI89_00665 LI89_00665 147366 148469 - tRNA (uracil-5-)-methyltransferase catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs gene gene132 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00665 LI89_00670 LI89_00670 btuB btuB 148894 150795 + vitamin B12/cobalamin outer membrane transporter involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space gene gene133 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00670 LI89_00675 LI89_00675 LI89_00675 150740 151603 + glutamate racemase converts L-glutamate to D-glutamate%2C a component of peptidoglycan gene gene134 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00675 LI89_00680 LI89_00680 LI89_00680 152050 153598 + 16S ribosomal RNA rRNA gene135 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00680 LI89_00685 LI89_00685 LI89_00685 153698 153774 + tRNA-Ile tRNA gene136 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00685 LI89_00690 LI89_00690 LI89_00690 153867 153942 + tRNA-Ala tRNA gene137 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00690 LI89_00695 LI89_00695 LI89_00695 154144 157077 + 23S ribosomal RNA rRNA gene138 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00695 LI89_00700 LI89_00700 LI89_00700 157171 157286 + 5S ribosomal RNA rRNA gene139 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00700 LI89_00705 LI89_00705 LI89_00705 157501 157842 - lipoprotein required for high salt suppression of motility gene gene140 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00705 LI89_00710 LI89_00710 pssA pssA 157904 159259 - phosphatidylserine synthase catalyzes de novo synthesis of phosphatidylserine from CDP-diacylglycerol and L-serine which leads eventually to the production of phosphatidylethanolamine%3B bounds to the ribosome gene gene141 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00710 LI89_00715 LI89_00715 protein acetyltransferase protein acetyltransferase 159437 162086 - disrupted pseudogene gene142 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00715 LI89_00720 LI89_00720 DTW domain-containing protein YfiP DTW domain-containing protein YfiP 162139 162857 - disrupted pseudogene gene143 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00720 LI89_00725 LI89_00725 btuB btuB 162874 164019 + disrupted pseudogene gene144 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00725 LI89_00730 LI89_00730 LI89_00730 163964 164827 + glutamate racemase converts L-glutamate to D-glutamate%2C a component of peptidoglycan gene gene145 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00730 LI89_00735 LI89_00735 LI89_00735 165274 166822 + 16S ribosomal RNA rRNA gene146 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00735 LI89_00740 LI89_00740 LI89_00740 166922 166998 + tRNA-Ile tRNA gene147 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00740 LI89_00745 LI89_00745 LI89_00745 167050 167125 + tRNA-Ala tRNA gene148 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00745 LI89_00750 LI89_00750 LI89_00750 167327 170260 + 23S ribosomal RNA rRNA gene149 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00750 LI89_00755 LI89_00755 LI89_00755 170360 170475 + 5S ribosomal RNA rRNA gene150 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00755 LI89_00760 LI89_00760 LI89_00760 170601 170677 + tRNA-Asp tRNA gene151 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00760 LI89_00765 LI89_00765 LI89_00765 170731 170806 + tRNA-Trp tRNA gene152 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00765 LI89_00770 LI89_00770 LI89_00770 171325 172281 + sugar ABC transporter substrate-binding protein gene gene153 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00770 LI89_00775 LI89_00775 LI89_00775 172366 173853 + sugar ABC transporter ATP-binding protein gene gene154 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00775 LI89_00780 LI89_00780 LI89_00780 173889 174887 + sugar ABC transporter permease gene gene155 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00780 LI89_00785 LI89_00785 LI89_00785 174887 175879 + ABC transporter permease membrane component of a putative sugar ABC transporter system gene gene156 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00785 LI89_00790 LI89_00790 LI89_00790 175866 176747 - transcriptional regulator HdfR Negatively regulates the transcription of the flagellar master operon flhDC by binding to the upstream region of the operon gene gene157 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00790 LI89_00795 LI89_00795 LI89_00795 176867 177205 + hypothetical protein gene gene158 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00795 LI89_00800 LI89_00800 LI89_00800 177309 178832 - ATP-dependent protease among the AAA+ ATPases%2C the YifB protease family belongs to the Helix 2 insert clade%3B unknown function gene gene159 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00800 LI89_00805 LI89_00805 LI89_00805 179406 181052 + acetolactate synthase catalytic subunit catalyzes the formation of 2-acetolactate from pyruvate%3B also known as acetolactate synthase large subunit gene gene160 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00805 LI89_00810 LI89_00810 ilvM ilvM 181049 181306 + acetolactate synthase 2 regulatory subunit gene gene161 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00810 LI89_00815 LI89_00815 LI89_00815 181329 182255 + branched-chain amino acid aminotransferase gene gene162 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00815 LI89_00820 LI89_00820 LI89_00820 182385 184235 + dihydroxy-acid dehydratase catalyzes the dehydration of 2%2C3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis gene gene163 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00820 LI89_00825 LI89_00825 LI89_00825 184241 185785 + threonine dehydratase threonine deaminase%3B threonine dehydratase%3B in Escherichia coli%2C IlvA is part of the isoleucine biosynthetic pathway gene gene164 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00825 LI89_00830 LI89_00830 LI89_00830 186044 187288 + hypothetical protein gene gene165 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00830 LI89_00835 LI89_00835 LI89_00835 187301 188182 - transcriptional regulator participates in controlling several genes involved in isoleucine and valine biosynthesis%3B activates the transcription of the ilvC gene in the presence of acetolactate or acetohydroxybutyrate gene gene166 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00835 LI89_00840 LI89_00840 LI89_00840 188435 189913 + ketol-acid reductoisomerase catalyzes the formation of (R)-2%2C3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis gene gene167 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00840 LI89_00845 LI89_00845 antitermination protein antitermination protein 190235 190599 + disrupted pseudogene gene168 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00845 LI89_00850 LI89_00850 colicin transporter colicin transporter 190699 193050 + disrupted pseudogene gene169 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00850 LI89_00855 LI89_00855 LI89_00855 193329 193583 + cloacin gene gene170 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00855 LI89_00860 LI89_00860 LI89_00860 193797 194051 + colicin transporter gene gene171 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00860 LI89_00865 LI89_00865 LI89_00865 194111 194869 - molecular chaperone gene gene172 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00865 LI89_00870 LI89_00870 LI89_00870 194835 196109 - fimbrial protein gene gene173 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00870 LI89_00875 LI89_00875 LI89_00875 196220 198907 - fimbrial protein gene gene174 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00875 LI89_00880 LI89_00880 LI89_00880 198948 199676 - fimbrial chaperone protein gene gene175 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00880 LI89_00885 LI89_00885 LI89_00885 199812 200342 - fimbrial protein gene gene176 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00885 LI89_00890 LI89_00890 LI89_00890 200956 201237 - peptidylprolyl isomerase rotamase C%3B accelerates isomerization of the peptidyl prolyl bond gene gene177 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00890 LI89_00895 LI89_00895 LI89_00895 201451 203475 + ATP-dependent DNA helicase Rep single-stranded DNA-dependent ATPase%3B initiates unwinding at a nick in the DNA%3B involved in DNA replication gene gene178 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00895 LI89_00900 LI89_00900 LI89_00900 203531 205357 - exo-poly-alpha-D-galacturonosidase gene gene179 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00900 LI89_00905 LI89_00905 LI89_00905 205514 207007 - guanosine polyphosphate pyrophosphohydrolase catalyzes the conversion of guanosine 5'-triphosphate%2C3'-diphosphate (pppGpp) to guanosine 5'-diphosphate%2C3'-diphosphate (ppGpp)%3B pppGpp and ppGpp control the stringent response during amino acid starvation gene gene180 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00905 LI89_00910 LI89_00910 LI89_00910 207014 208300 - ATP-dependent RNA helicase RhlB enables ATP-dependent unwinding of double stranded RNA as a component of the RNA degradosome%2C a multi-enzyme complex important in RNA processing and messenger RNA degradation gene gene181 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00910 LI89_00915 LI89_00915 trxA trxA 208419 208745 + thioredoxin gene gene182 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00915 LI89_00920 LI89_00920 rho rho 209231 210490 + transcription termination factor Rho An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes gene gene183 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00920 LI89_00925 LI89_00925 LI89_00925 210772 211869 + UDP-phosphate N-acetylglucosaminyl 1-phosphate transferase catalyzes the formation of alpha-N-acetylglucosaminyl-pyrophosphoryl-undecaprenyl from alpha-N-acetylglucosaminyl 1-phosphate and the lipid carrier undecaprenyl phosphate gene gene184 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00925 LI89_00930 LI89_00930 LI89_00930 211890 212966 + lipopolysaccharide biosynthesis protein WzzE Enterobacterial Common Antigen (ECA) polysaccharide chain length modulation protein gene gene185 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00930 LI89_00935 LI89_00935 LI89_00935 213046 214176 + UDP-N-acetylglucosamine 2-epimerase gene gene186 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00935 LI89_00940 LI89_00940 wecC wecC 214173 215435 + UDP-N-acetyl-D-mannosamine dehydrogenase catalyzes the oxidation of UDP-N-acetyl-D-mannosamine to UDP-N-acetylmannosaminuronic acid gene gene187 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00940 LI89_00945 LI89_00945 LI89_00945 215432 216499 + dTDP-glucose 4%2C6-dehydratase gene gene188 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00945 LI89_00950 LI89_00950 LI89_00950 216830 217705 + glucose-1-phosphate thymidylyltransferase gene gene189 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00950 LI89_00955 LI89_00955 LI89_00955 217689 218426 + TDP-fucosamine acetyltransferase gene gene190 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00955 LI89_00960 LI89_00960 LI89_00960 218428 219558 + TDP-4-oxo-6-deoxy-D-glucose aminotransferase catalyzes the formation of dTDP-D-fucosamine from dTDP-4-oxo-6-deoxy-D-glucose in enterobacterial common antigen biosynthesis gene gene191 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00960 LI89_00965 LI89_00965 LI89_00965 219560 220816 + O-antigen translocase involved in the movement of lipid III across the membrane gene gene192 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00965 LI89_00970 LI89_00970 LI89_00970 220839 221924 + 4-alpha-L-fucosyltransferase catalyzes the synthesis of a lipid-linked intermediate involved in ECA synthesis gene gene193 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00970 LI89_00975 LI89_00975 LI89_00975 221921 223297 + common antigen polymerase enterobacterial common antigen polymerase gene gene194 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00975 LI89_00980 LI89_00980 LI89_00980 223306 224064 + UDP-N-acetyl-D-mannosaminuronic acid transferase gene gene195 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00980 LI89_00985 LI89_00985 LI89_00985 224412 225803 + D-alanine/D-serine/glycine permease involved in the transport across the cytoplasmic membrane of D-alanine%2C D-serine and glycine gene gene196 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00985 LI89_00990 LI89_00990 LI89_00990 225952 226028 + tRNA-Arg tRNA gene197 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00990 LI89_00995 LI89_00995 LI89_00995 226112 226187 + tRNA-His tRNA gene198 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_00995 LI89_01000 LI89_01000 LI89_01000 226203 226289 + tRNA-Leu tRNA gene199 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01000 LI89_01005 LI89_01005 LI89_01005 226365 226441 + tRNA-Pro tRNA gene200 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01005 LI89_01015 LI89_01015 LI89_01015 227309 228508 - protoheme IX biogenesis protein gene gene201 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01015 LI89_01020 LI89_01020 LI89_01020 228511 229635 - uroporphyrin-III methyltransferase gene gene202 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01020 LI89_01025 LI89_01025 hemD hemD 229668 230414 - uroporphyrinogen-III synthase catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane%3B functions in tetrapyrrole and heme biosynthesis gene gene203 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01025 LI89_01030 LI89_01030 hemC hemC 230411 231352 - porphobilinogen deaminase transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis gene gene204 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01030 LI89_01040 LI89_01040 cyaA cyaA 231757 234303 + adenylate cyclase catalyzes transfer of adenylyl group of ATP from pyrophosphate to the 3'-hydroxyl group to form cyclic AMP gene gene205 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01040 LI89_01045 LI89_01045 cyaY cyaY 234474 234794 - frataxin-like protein iron-dependent inhibitor of iron-sulfur cluster formation%3B iron-binding and oxidizing protein%3B defects in the mitochondrial frataxin protein cause Friedreich ataxis which is an autosomal recessive neurodegenerative disease%3B based on phylogenomic distribution this protein may have a role in iron-sulfur cluster protein assembly gene gene206 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01045 LI89_01050 LI89_01050 LI89_01050 234908 235111 + hypothetical protein gene gene207 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01050 LI89_01055 LI89_01055 dapF dapF 235200 236024 + diaminopimelate epimerase involved in lysine biosynthesis%3B DAP epimerase%3B produces DL-diaminopimelate from LL-diaminopimelate gene gene208 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01055 LI89_01060 LI89_01060 LI89_01060 236118 236822 + hypothetical protein gene gene209 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01060 LI89_01065 LI89_01065 xerC xerC 236819 237748 + site-specific tyrosine recombinase XerC site-specific tyrosine recombinase which cuts and rejoins DNA molecules%3B binds cooperatively to specific DNA consensus sites%3B forms a heterotetrameric complex with XerC%3B XerCD exhibit similar sequences%3B essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation%3B cell division protein FtsK may regulate the XerCD complex%3B enzyme from Streptococcus group has unusual active site motifs gene gene210 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01065 LI89_01070 LI89_01070 LI89_01070 237748 238464 + flavin mononucleotide phosphatase YigB%3B member of the haloacid dehalogenase (HAD)-like hydrolases superfamily of protein%3B unknown function gene gene211 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01070 LI89_01075 LI89_01075 uvrD uvrD 238565 240727 + DNA-dependent helicase II unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present%3B involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair. gene gene212 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01075 LI89_01080 LI89_01080 LI89_01080 240910 241569 - TetR family transcriptional regulator gene gene213 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01080 LI89_01085 LI89_01085 LI89_01085 241789 243006 + hypothetical protein gene gene214 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01085 LI89_01090 LI89_01090 LI89_01090 243033 243863 + hypothetical protein gene gene215 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01090 LI89_01095 LI89_01095 LI89_01095 244366 245316 + magnesium transporter CorA responsible for the influx of magnesium ions gene gene216 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01095 LI89_01100 LI89_01100 LI89_01100 245507 246397 - chloramphenical resistance permease RarD gene gene217 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01100 LI89_01105 LI89_01105 LI89_01105 246477 246947 - hypothetical protein gene gene218 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01105 LI89_01110 LI89_01110 LI89_01110 247128 248006 + phospholipase A catalyzes the hydrolysis of phosphatidylcholine gene gene219 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01110 LI89_01115 LI89_01115 LI89_01115 248083 249915 + ATP-dependent DNA helicase RecQ functions in blocking illegitimate recombination%2C enhancing topoisomerase activity%2C initiating SOS signaling and clearing blocked replication forks%3B component of the RecF recombinational pathway gene gene220 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01115 LI89_01120 LI89_01120 LI89_01120 249963 250583 + threonine transporter gene gene221 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01120 LI89_01125 LI89_01125 rhtB rhtB 250632 251252 - homoserine transporter gene gene222 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01125 LI89_01130 LI89_01130 LI89_01130 251456 252511 + lysophospholipase L2 lecithinase B%3B catalyzes the conversion of 1-lysophosphatidylcholine to glycerophosphocholine%3B can also hydrolyze 2-acyl glycerophosphoethanolamine and other substrates gene gene223 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01130 LI89_01135 LI89_01135 LI89_01135 252523 253332 + hydrolase gene gene224 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01135 LI89_01140 LI89_01140 glpQ glpQ 253437 254531 - glycerophosphodiester phosphodiesterase hydrolyzes deacylated phospholipids to glycerol 3-phosphate and the corresponding alcohols%3B periplasmic gene gene225 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01140 LI89_01145 LI89_01145 glpT glpT 254647 256011 - sn-glycerol-3-phosphate transporter catalyzes the uptake of glycerol-3-phosphate into the cell with the simultaneous export of inorganic phosphate from the cell gene gene226 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01145 LI89_01155 LI89_01155 LI89_01155 256407 258062 + glycerol-3-phosphate dehydrogenase gene gene227 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01155 LI89_01160 LI89_01160 LI89_01160 258052 259326 + glycerol-3-phosphate dehydrogenase sn-glycerol-3-phosphate dehydrogenase (anaerobic)%3B catalyzes the formation of dihydroxyacetone from glycerol 3-phosphate%3B part of GlpABC complex%3B presumably this subunit is responsible for membrane interactions and contains iron-sulfur clusters gene gene228 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01160 LI89_01165 LI89_01165 glpC glpC 259323 260576 + glycerol-3-phosphate dehydrogenase anaerobic%3B with GlpAB catalyzes the conversion of glycerol-3-phosphate to dihydroxyacetone phosphate gene gene229 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01165 LI89_01170 LI89_01170 LI89_01170 260810 261334 - lipoprotein gene gene230 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01170 LI89_01175 LI89_01175 LI89_01175 261395 262075 - hypothetical protein gene gene231 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01175 LI89_01180 LI89_01180 LI89_01180 262322 262576 + sulfur transfer protein SirA TusA%3B transfers sulfur to TusBCD complex%3B involved in thiouridation of U34 position of some tRNAs gene gene232 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01180 LI89_01185 LI89_01185 zntA zntA 262598 264928 - zinc ABC transporter ATPase P-type ATPase involved in the export of lead%2C cadmium%2C zinc and mercury gene gene233 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01185 LI89_01190 LI89_01190 LI89_01190 265212 265838 - membrane protein gene gene234 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01190 LI89_01195 LI89_01195 LI89_01195 266126 266446 + hypothetical protein gene gene235 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01195 LI89_01200 LI89_01200 LI89_01200 266485 266868 + hypothetical protein gene gene236 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01200 LI89_01205 LI89_01205 LI89_01205 266913 267185 - membrane protein gene gene237 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01205 LI89_01210 LI89_01210 rsmD rsmD 267175 267858 - 16S rRNA methyltransferase catalyzes the methylation of 16S rRNA at position G966 gene gene238 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01210 LI89_01215 LI89_01215 LI89_01215 268077 269600 + cell division protein FtsY gene gene239 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01215 LI89_01220 LI89_01220 LI89_01220 269606 270274 + cell division protein FtsE ATP-binding protein of an ATP-binding cassette transporter%3B when bound to FtsX%2C FtsEX localizes to the cell division site and plays a role in the assembly or stability of the septal ring under low-salt growth conditions gene gene240 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01220 LI89_01225 LI89_01225 ftsX ftsX 270264 271220 + cell division protein FtsX ABC transporter%2C membrane protein gene gene241 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01225 LI89_01230 LI89_01230 LI89_01230 271503 272360 + RNA polymerase factor sigma-32 binds with the catalytic core of RNA polymerase to produce the holoenzyme%3B this sigma factor is responsible for the expression of heat shock promoters gene gene242 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01230 LI89_01235 LI89_01235 LI89_01235 272438 272830 - acetyltransferase gene gene243 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01235 LI89_01240 LI89_01240 LI89_01240 273252 274367 + leucine ABC transporter substrate-binding protein with LivFGHM is involved in the high affinity leucine transport gene gene244 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01240 LI89_01245 LI89_01245 LI89_01245 274526 275452 + branched-chain amino acid transporter permease subunit LivH LivHMGF is the membrane component of the LIV-I/LS branched-chain amino acid transporter gene gene245 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01245 LI89_01250 LI89_01250 livM livM 275449 276735 + leucine/isoleucine/valine transporter permease subunit Part of the ABC transporter complex LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids%3B LivFGHMK is specific for the transport of leucine%2C while LivFGHMJ is a transporter for leucine%2C isoleucine%2C and valine gene gene246 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01250 LI89_01255 LI89_01255 livG livG 276732 277499 + leucine/isoleucine/valine transporter ATP-binding subunit Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids%3B LivFGHMK is specific for the transport of leucine%2C while LivFGHMJ is a transporter for leucine%2C isoleucine%2C and valine gene gene247 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01255 LI89_01260 LI89_01260 livF livF 277544 278245 + leucine/isoleucine/valine transporter ATP-binding subunit with LivGHMJ and LivGHMK is part of the high-affinity branched-chain amino acid transport system%3B LivFGHMK is specific for the transport of leucine%2C while LivFGHMJ is a transporter for leucine%2C isoleucine%2C and valine gene gene248 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01260 LI89_01265 LI89_01265 LI89_01265 278306 279418 - hypothetical protein gene gene249 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01265 LI89_01270 LI89_01270 LI89_01270 279453 279959 - alpha-related fimbriae minor subunit 2 gene gene250 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01270 LI89_01275 LI89_01275 LI89_01275 279973 280617 - hypothetical protein gene gene251 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01275 LI89_01280 LI89_01280 LI89_01280 280589 281275 - pilus assembly protein gene gene252 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01280 LI89_01285 LI89_01285 LI89_01285 281293 283452 - alpha-related fimbriae usher protein gene gene253 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01285 LI89_01290 LI89_01290 LI89_01290 283768 284250 - pilus assembly protein gene gene254 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01290 LI89_01295 LI89_01295 LI89_01295 284810 286129 + glycerol-3-phosphate ABC transporter substrate-binding protein with UgpACE is involved in the uptake of glycerol-3-phosphate gene gene255 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01295 LI89_01300 LI89_01300 LI89_01300 286252 287139 + glycerol-3-phosphate transporter permease with UgpEC is involved in the uptake of glycerol-3-phosphate gene gene256 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01300 LI89_01305 LI89_01305 LI89_01305 287136 287981 + glycerol-3-phosphate transporter membrane protein with UgpABC is involved in uptake of glycerol-3-phosphate gene gene257 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01305 LI89_01310 LI89_01310 ugpC ugpC 287988 289091 + glycerol-3-phosphate transporter ATP-binding subunit part of the UgpABCE glycerol-3-phosphate uptake system gene gene258 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01310 LI89_01315 LI89_01315 ugpQ ugpQ 289088 289828 + glycerophosphodiester phosphodiesterase hydrolyzes diesters during transport at the inner face of the cytoplasmic membrane to glycerol-3-phosphate and alcohol%3B induced when cells are starved for inorganic phosphate gene gene259 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01315 LI89_01320 LI89_01320 LI89_01320 289960 290919 + membrane protein gene gene260 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01320 LI89_01330 LI89_01330 LI89_01330 291861 292814 - transcriptional regulator homocysteine-binding%3B positive regulator of metA%2C metE and metH gene gene261 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01330 LI89_01335 LI89_01335 LI89_01335 292920 295196 + 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase gene gene262 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01335 LI89_01340 LI89_01340 LI89_01340 295262 296116 - carboxymethylenebutenolidase gene gene263 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01340 LI89_01345 LI89_01345 LI89_01345 296687 297448 + uridine phosphorylase catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate%3B involved in the pyrimidine salvage pathway gene gene264 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01345 LI89_01350 LI89_01350 LI89_01350 297593 298390 + C4-dicarboxylate ABC transporter gene gene265 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01350 LI89_01355 LI89_01355 LI89_01355 298753 300564 + carbon starvation protein CstA gene gene266 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01355 LI89_01360 LI89_01360 LI89_01360 300693 301223 + cytochrome O ubiquinol oxidase gene gene267 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01360 LI89_01365 LI89_01365 LI89_01365 301424 302950 + DNA recombination protein RmuC YigN%3B nuclease that may cleave DNA structures arising during the recombination of short-inverted repeats and thereby prevents the inversion of the internal sequence%3B transcription is induced by DNA-damaging agents such as nalidixic acid or mitomycin C in a LexA-dependent manner gene gene268 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01365 LI89_01370 LI89_01370 ubiE ubiE 303084 303839 + ubiquinone biosynthesis methyltransferase UbiE Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone and menaquinone gene gene269 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01370 LI89_01375 LI89_01375 LI89_01375 303853 304506 + membrane protein gene gene270 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01375 LI89_01380 LI89_01380 ubiB ubiB 304503 306134 + ubiquinone biosynthesis protein UbiB an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone%3B functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis%3B similar to eukaryotic proteins that exhibit kinase functions gene gene271 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01380 LI89_01385 LI89_01385 LI89_01385 306335 306601 + preprotein translocase subunit TatA gene gene272 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01385 LI89_01390 LI89_01390 LI89_01390 306605 307261 + preprotein translocase subunit TatB gene gene273 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01390 LI89_01395 LI89_01395 LI89_01395 307264 308043 + twin-arginine protein translocation system subunit TatC with TatABE forms the twin-arginine translocation complex which is involved in the transport of proteins across the cytoplasmic membrane gene gene274 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01395 LI89_01400 LI89_01400 LI89_01400 308099 308881 + DNase TatD magnesium dependent%3B involved in quality control of mutated Tat exported substrates%3B not involved in the Sec-independent protein export system gene gene275 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01400 LI89_01405 LI89_01405 LI89_01405 308896 309918 + delta-aminolevulinic acid dehydratase catalyzes the formation of porphobilinogen from 5-aminolevulinate gene gene276 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01405 LI89_01410 LI89_01410 rfaH rfaH 310008 310496 - transcriptional regulator gene gene277 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01410 LI89_01415 LI89_01415 LI89_01415 310763 312259 + 3-octaprenyl-4-hydroxybenzoate carboxy-lyase catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol gene gene278 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01415 LI89_01420 LI89_01420 fre fre 312314 313015 + FMN reductase NAD(P)H-flavin reductase%3B catalyzes the reversible oxidation/reduction of NAD(P) and flavine mononucleotide%3B in Salmonella and E. coli this protein also reduces aquacob(III)alamin to cob(II)alamin gene gene279 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01420 LI89_01425 LI89_01425 fadA fadA 313114 314277 - 3-ketoacyl-CoA thiolase FadA%3B fatty acid oxidation complex component beta%3B functions in a heterotetramer with FadB%3B similar to FadI2J2 complex%3B functions in beta-oxidation of fatty acids gene gene280 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01425 LI89_01430 LI89_01430 fadB fadB 314289 316478 - multifunctional fatty acid oxidation complex subunit alpha includes enoyl-CoA hydratase%2C delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase%2C 3-hydroxyacyl-CoA dehydrogenase%2C and 3-hydroxybutyryl-CoA epimerase%3B catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA%3B also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities%3B forms a heterotetramer with FadA%3B similar to FadI2J2 complex%3B functions in beta-oxidation of fatty acids gene gene281 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01430 LI89_01435 LI89_01435 LI89_01435 316750 318081 + proline dipeptidase catalyzes the hydrolysis of dipeptides with a proline at the C-terminal%3B also catalyzes the low efficiency hydrolysis of organophosphate di- and tri-esters gene gene282 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01435 LI89_01440 LI89_01440 LI89_01440 318081 318695 + hypothetical protein gene gene283 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01440 LI89_01445 LI89_01445 LI89_01445 318732 320183 + potassium transporter gene gene284 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01445 LI89_01450 LI89_01450 LI89_01450 320205 320738 + protoporphyrinogen oxidase gene gene285 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01450 LI89_01455 LI89_01455 LI89_01455 321203 322751 + 16S ribosomal RNA rRNA gene286 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01455 LI89_01460 LI89_01460 LI89_01460 322884 322959 + tRNA-Glu tRNA gene287 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01460 LI89_01465 LI89_01465 LI89_01465 323194 326127 + 23S ribosomal RNA rRNA gene288 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01465 LI89_01470 LI89_01470 LI89_01470 326221 326336 + 5S ribosomal RNA rRNA gene289 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01470 LI89_01475 LI89_01475 murB murB 326526 327563 + UDP-N-acetylenolpyruvoylglucosamine reductase catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis gene gene290 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01475 LI89_01480 LI89_01480 LI89_01480 327560 328519 + biotin--[acetyl-CoA-carboxylase] synthetase catalyzes the formation of biotinyl-5'-AMP%2C also acts as a transcriptional repressor of the biotin operon gene gene291 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01480 LI89_01485 LI89_01485 LI89_01485 328559 329509 - pantothenate kinase gene gene292 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01485 LI89_01490 LI89_01490 LI89_01490 329719 330270 - histone acetyltransferase gene gene293 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01490 LI89_01495 LI89_01495 LI89_01495 330672 330747 + tRNA-Thr tRNA gene294 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01495 LI89_01500 LI89_01500 LI89_01500 330766 330850 + tRNA-Tyr tRNA gene295 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01500 LI89_01505 LI89_01505 LI89_01505 331163 331237 + tRNA-Gly tRNA gene296 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01505 LI89_01510 LI89_01510 LI89_01510 331244 331319 + tRNA-Thr tRNA gene297 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01510 LI89_01515 LI89_01515 tuf tuf 331428 332612 + elongation factor Tu EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu gene gene298 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01515 LI89_01520 LI89_01520 secE secE 332852 333235 + preprotein translocase subunit SecE forms a complex with SecY and SecG%3B SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane%2C a process driven by ATP and a proton-motive force gene gene299 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01520 LI89_01525 LI89_01525 nusG nusG 333237 333782 + transcription antiterminator NusG Modulates Rho-dependent transcription termination gene gene300 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01525 LI89_01530 LI89_01530 LI89_01530 333976 334404 + 50S ribosomal protein L11 gene gene301 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01530 LI89_01535 LI89_01535 LI89_01535 334408 335112 + 50S ribosomal protein L1 gene gene302 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01535 LI89_01540 LI89_01540 rplJ rplJ 335487 335990 + 50S ribosomal protein L10 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit gene gene303 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01540 LI89_01545 LI89_01545 rplL rplL 336058 336426 + 50S ribosomal protein L7/L12 present in two forms%3B L12 is normal%2C while L7 is aminoacylated at the N-terminal serine%3B the only multicopy ribosomal protein%3B 4:1 ratio of L7/L12 per ribosome%3B two L12 dimers bind L10%3B critically important for translation efficiency and fidelity%3B stimulates GTPase activity of translation factors gene gene304 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01545 LI89_01550 LI89_01550 rpoB rpoB 336770 340798 + DNA-directed RNA polymerase subunit beta DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates%3B beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme gene gene305 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01550 LI89_01555 LI89_01555 LI89_01555 340935 345155 + DNA-directed RNA polymerase subunit beta' DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter gene gene306 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01555 LI89_01560 LI89_01560 thiH thiH 345239 346369 - thiamine biosynthesis protein ThiH in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and iscS%3B with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine%2C cysteine and 1-deoxy-D-xylulose-5-phosphate%3B forms a complex with ThiG%3B contains an iron-sulfur center gene gene307 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01560 LI89_01565 LI89_01565 LI89_01565 346362 347150 - thiazole synthase gene gene308 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01565 LI89_01570 LI89_01570 LI89_01570 347152 347367 - thiamine biosynthesis protein ThiS gene gene309 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01570 LI89_01575 LI89_01575 LI89_01575 347364 348146 - molybdopterin-synthase adenylyltransferase gene gene310 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01575 LI89_01580 LI89_01580 LI89_01580 348130 348810 - thiamine-phosphate pyrophosphorylase catalyzes the formation of thiamine monophosphate from 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate gene gene311 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01580 LI89_01585 LI89_01585 LI89_01585 348797 350761 - thiamine biosynthesis protein ThiC catalyzes the formation of 4-amino-2-methyl-5-phosphomethylpyrimidine from 5-amino-1-(5-phospho-D-ribosyl)imidazole and S-adenosyl-L-methionine in thiamine biosynthesis gene gene312 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01585 LI89_01590 LI89_01590 LI89_01590 351256 351759 - regulator of sigma D gene gene313 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01590 LI89_01595 LI89_01595 nudC nudC 351851 352621 + NADH pyrophosphatase can catalyze hydrolysis of broad range of dinucleotide pyrophosphates but prefers reduced form of NADH%3B requires divalent metal ions such as magnesium and manganese and produces two mononucleoside 5'-phosphates gene gene314 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01595 LI89_01600 LI89_01600 LI89_01600 352755 353495 + hypothetical protein gene gene315 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01600 LI89_01605 LI89_01605 hemE hemE 353602 354669 + uroporphyrinogen decarboxylase catalyzes the formation of coproporphyrinogen from uroporphyrinogen III gene gene316 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01605 LI89_01610 LI89_01610 LI89_01610 354693 355397 + endonuclease V Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA%3B cleaves DNA containing urea residues%2C AP sites%2C base mismatches%2C insertion/deletion mismatches%2C flaps%2C and pseudo-Y structures gene gene317 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01610 LI89_01615 LI89_01615 LI89_01615 355443 356033 + hypothetical protein gene gene318 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01615 LI89_01620 LI89_01620 LI89_01620 356222 356497 + DNA-binding protein gene gene319 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01620 LI89_01625 LI89_01625 LI89_01625 356550 357203 + hypothetical protein gene gene320 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01625 LI89_01630 LI89_01630 LI89_01630 357298 358593 - phosphoribosylamine--glycine ligase catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis gene gene321 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01630 LI89_01635 LI89_01635 purH purH 358619 360208 - phosphoribosylaminoimidazolecarboxamide formyltransferase involved in de novo purine biosynthesis gene gene322 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01635 LI89_01640 LI89_01640 LI89_01640 360993 362541 + 16S ribosomal RNA rRNA gene323 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01640 LI89_01645 LI89_01645 LI89_01645 362641 362717 + tRNA-Ile tRNA gene324 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01645 LI89_01650 LI89_01650 LI89_01650 362769 362844 + tRNA-Ala tRNA gene325 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01650 LI89_01655 LI89_01655 LI89_01655 363047 365980 + 23S ribosomal RNA rRNA gene326 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01655 LI89_01660 LI89_01660 LI89_01660 366074 366189 + 5S ribosomal RNA rRNA gene327 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01660 LI89_01665 LI89_01665 LI89_01665 366204 366279 + tRNA-Thr tRNA gene328 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01665 LI89_01670 LI89_01670 LI89_01670 366321 366436 + 5S ribosomal RNA rRNA gene329 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01670 LI89_01675 LI89_01675 LI89_01675 366765 367925 + hydrolase gene gene330 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01675 LI89_01680 LI89_01680 actP actP 367964 369619 - acetate permease member of the sodium:solute symporter family%3B cotranscribed with the acs gene which encodes acetyl coenzyme A synthase%3B mutations affect acetate uptake gene gene331 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01680 LI89_01685 LI89_01685 LI89_01685 369616 369927 - membrane protein gene gene332 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01685 LI89_01690 LI89_01690 LI89_01690 369981 371939 - acetyl-CoA synthetase Acs%3B catalyzes the conversion of acetate and CoA to acetyl-CoA gene gene333 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01690 LI89_01695 LI89_01695 LI89_01695 372859 374172 + glutamate:protein symporter gene gene334 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01695 LI89_01700 LI89_01700 LI89_01700 374298 374930 - regulator gene gene335 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01700 LI89_01705 LI89_01705 LI89_01705 374955 377768 - histidine kinase phosphorylates the response regulator SsrB%3B is involved in the expression of the virulence genes of Salmonella pathogenicity island-2 gene gene336 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01705 LI89_01710 LI89_01710 LI89_01710 377956 378390 + hypothetical protein gene gene337 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01710 LI89_01715 LI89_01715 LI89_01715 378387 379868 + outer membrane secretin SsaC gene gene338 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01715 LI89_01720 LI89_01720 LI89_01720 379870 381081 + type III secretion protein SsaD gene gene339 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01720 LI89_01725 LI89_01725 LI89_01725 381099 381314 + type III secretion system protein%2C YseE family gene gene340 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01725 LI89_01730 LI89_01730 LI89_01730 381422 381715 + chromosome partitioning protein ParA gene gene341 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01730 LI89_01735 LI89_01735 LI89_01735 381791 382354 + chemotaxis protein gene gene342 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01735 LI89_01740 LI89_01740 LI89_01740 382384 382851 + hypothetical protein gene gene343 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01740 LI89_01745 LI89_01745 LI89_01745 382844 384310 + pathogenicity island 2 effector protein SseC gene gene344 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01745 LI89_01750 LI89_01750 LI89_01750 384321 384914 + chemotaxis protein gene gene345 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01750 LI89_01755 LI89_01755 LI89_01755 384911 385312 + pathogenicity island 2 effector protein SseE gene gene346 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01755 LI89_01760 LI89_01760 LI89_01760 385321 385803 + hypothetical protein gene gene347 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01760 LI89_01770 LI89_01770 LI89_01770 386766 387473 + AraC family transcriptional regulator gene gene348 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01770 LI89_01775 LI89_01775 LI89_01775 387482 387697 + type III secretion system needle protein SsaG Salmonella pathogenicity island 2 protein%3B member of a type III secretion system involved in the survival and replication of Salmonella in a host cell gene gene349 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01775 LI89_01780 LI89_01780 LI89_01780 387694 387969 + type III secretion system protein%2C SsaH family gene gene350 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01780 LI89_01785 LI89_01785 LI89_01785 388010 388258 + ATP-dependent helicase HrpB gene gene351 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01785 LI89_01790 LI89_01790 LI89_01790 388255 388986 + type III secretion protein SsaJ gene gene352 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01790 LI89_01795 LI89_01795 LI89_01795 389003 389596 + hypothetical protein gene gene353 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01795 LI89_01800 LI89_01800 LI89_01800 389593 390252 + type III secretion protein HrpE gene gene354 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01800 LI89_01805 LI89_01805 LI89_01805 390236 391249 + type III secretion system protein gene gene355 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01805 LI89_01810 LI89_01810 LI89_01810 391358 391729 + type III secretion system protein gene gene356 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01810 LI89_01815 LI89_01815 LI89_01815 391726 393765 + secretion system apparatus protein SsaV with SsaC forms part of a protein export system across the inner and outer cell membranes%3B part of the Salmonella pathogenicity island 2%3B part of the type III secretion system gene gene357 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01815 LI89_01820 LI89_01820 LI89_01820 393752 395107 + type III secretion protein ATPase gene gene358 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01820 LI89_01825 LI89_01825 LI89_01825 395176 395490 + type III secretion protein gene gene359 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01825 LI89_01830 LI89_01830 LI89_01830 395471 395869 + hypothetical protein gene gene360 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01830 LI89_01835 LI89_01835 LI89_01835 395847 396797 + type III secretion protein SsaQ gene gene361 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01835 LI89_01840 LI89_01840 ssaR ssaR 396903 397553 + type III secretion system protein SsaR part of a set of proteins involved in the infection of eukaryotic cells%3B in plant pathogens involved in the hypersensitivity response gene gene362 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01840 LI89_01845 LI89_01845 LI89_01845 397576 397845 + type III secretion system protein SsaS gene gene363 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01845 LI89_01850 LI89_01850 LI89_01850 397847 398641 + type III secretion protein gene gene364 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01850 LI89_01855 LI89_01855 LI89_01855 398631 399707 + secretion system apparatus protein SsaU gene gene365 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01855 LI89_01860 LI89_01860 LI89_01860 399894 401108 + hypothetical protein gene gene366 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01860 LI89_01865 LI89_01865 LI89_01865 401159 401380 + hypothetical protein gene gene367 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01865 LI89_01870 LI89_01870 LI89_01870 401669 402388 - ferrichrome ABC transporter substrate-binding protein gene gene368 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01870 LI89_01880 LI89_01880 LI89_01880 402844 403386 + RNA polymerase sigma factor gene gene369 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01880 LI89_01885 LI89_01885 LI89_01885 403376 404344 + histidine kinase gene gene370 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01885 LI89_01890 LI89_01890 LI89_01890 404450 407221 + TonB-dependent receptor gene gene371 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01890 LI89_01895 LI89_01895 LI89_01895 407350 409056 + membrane protein gene gene372 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01895 LI89_01900 LI89_01900 LI89_01900 409041 411824 + peptidase M16 gene gene373 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01900 LI89_01905 LI89_01905 LI89_01905 411881 414214 - mechanosensitive ion channel protein gene gene374 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01905 LI89_01910 LI89_01910 LI89_01910 414633 416765 + ferrioxamine B receptor gene gene375 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01910 LI89_01915 LI89_01915 LI89_01915 416829 417068 - hypothetical protein gene gene376 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01915 LI89_01920 LI89_01920 LI89_01920 417235 418704 + GntR family transcriptional regulator gene gene377 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01920 LI89_01925 LI89_01925 hmuV hmuV 418707 419498 - hemin importer ATP-binding subunit with HmuTU is involved in the transport of hemin gene gene378 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01925 LI89_01930 LI89_01930 LI89_01930 419500 420504 - iron ABC transporter gene gene379 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01930 LI89_01935 LI89_01935 LI89_01935 420501 421340 - hemin ABC transporter substrate-binding protein gene gene380 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01935 LI89_01940 LI89_01940 LI89_01940 421337 422374 - hemin transporter gene gene381 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01940 LI89_01945 LI89_01945 LI89_01945 422491 424554 - ligand-gated channel protein gene gene382 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01945 LI89_01950 LI89_01950 LI89_01950 424729 424974 - hemin transporter gene gene383 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01950 LI89_01955 LI89_01955 LI89_01955 425006 425656 - pro gene gene384 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01955 LI89_01960 LI89_01960 LI89_01960 425653 426198 - ShuX gene gene385 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01960 LI89_01965 LI89_01965 LI89_01965 426195 427508 - coproporphyrinogen III oxidase catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III gene gene386 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01965 LI89_01970 LI89_01970 LI89_01970 428146 429138 + threonine dehydratase catalyzes the formation of 2-oxobutanoate from L-threonine%3B catabolic gene gene387 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01970 LI89_01975 LI89_01975 LI89_01975 429163 430491 + septum site-determining protein gene gene388 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01975 LI89_01980 LI89_01980 LI89_01980 430546 431766 + propionate kinase catalyzes the formation of propanoyl phosphate from propanoate and ATP%3B TdcD also has acetate kinase activities and functions in anaerobic threonine catabolism gene gene389 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01980 LI89_01985 LI89_01985 LI89_01985 431817 434111 + pyruvate formate-lyase formate acetyltransferase%3B catalyzes the formation of formate and acetyl-CoA from pyruvate gene gene390 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01985 LI89_01990 LI89_01990 LI89_01990 434216 434291 - tRNA-Phe tRNA gene391 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01990 LI89_01995 LI89_01995 LI89_01995 434435 435010 - transcriptional regulator gene gene392 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_01995 LI89_02000 LI89_02000 LI89_02000 435322 436485 + glycerate kinase gene gene393 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02000 LI89_02005 LI89_02005 dipZ dipZ 436533 438281 - thiol:disulfide interchange protein precursor two electrons are transferred from cytoplasmic NADPH to thioredoxin and then to the inner membrane protein DsbD which keeps the disulfide isomerase DsbC in a reduced state in the oxidizing periplasm%3B DsbC in turns rearranges incorrectly made disulfide bonds in the periplasm gene gene394 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02005 LI89_02010 LI89_02010 LI89_02010 438257 438577 - cation tolerance protein CutA copper binding protein required for copper tolerance%3B involved in resistance toward heavy metals gene gene395 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02010 LI89_02015 LI89_02015 LI89_02015 438782 440083 - C4-dicarboxylate transporter functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate%3B similar to dcuB gene gene396 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02015 LI89_02020 LI89_02020 aspA aspA 440203 441639 - aspartate ammonia-lyase catalyzes the formation of fumarate from aspartate gene gene397 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02020 LI89_02025 LI89_02025 LI89_02025 442081 442608 + exclusion suppressor FxsA gene gene398 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02025 LI89_02030 LI89_02030 groES groES 442862 443155 + molecular chaperone GroES 10 kDa chaperonin%3B Cpn10%3B GroES%3B forms homoheptameric ring%3B binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it%3B folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES%3B release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring gene gene399 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02030 LI89_02035 LI89_02035 groEL groEL 443210 444856 + molecular chaperone GroEL 60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds%3B many bacteria have multiple copies of the groEL gene which are active under different environmental conditions%3B the B.japonicum protein in this cluster is expressed constitutively%3B in Rhodobacter%2C Corynebacterium and Rhizobium this protein is essential for growth gene gene400 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02035 LI89_02040 LI89_02040 LI89_02040 444894 445121 - hypothetical protein gene gene401 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02040 LI89_02045 LI89_02045 LI89_02045 445239 445577 + membrane protein gene gene402 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02045 LI89_02050 LI89_02050 LI89_02050 445644 446675 - lysine 2%2C3-aminomutase gene gene403 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02050 LI89_02055 LI89_02055 LI89_02055 446711 447277 + elongation factor P gene gene404 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02055 LI89_02060 LI89_02060 LI89_02060 447463 447594 + ECN family pore-forming entericidin gene gene405 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02060 LI89_02065 LI89_02065 LI89_02065 447773 448087 + multidrug transporter member of the SMR family of proton-dependent drug efflux transporters%3B quaternary ammonium compound efflux pump%3B confers resistance to cetylpyridinium%2C cetyldimethylethyl ammonium and cetrimide cations gene gene406 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02065 LI89_02070 LI89_02070 LI89_02070 448089 448628 - membrane protein lipocalin%3B globomycin-sensitive outer membrane lipoprotein gene gene407 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02070 LI89_02075 LI89_02075 LI89_02075 448819 449175 - fumarate reductase gene gene408 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02075 LI89_02080 LI89_02080 LI89_02080 449192 449584 - fumarate reductase part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration%3B FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit%2C respectively%3B FrdCD are the membrane components which interact with quinone and are involved in electron transfer%3B the catalytic subunits are similar to succinate dehydrogenase SdhAB gene gene409 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02080 LI89_02085 LI89_02085 LI89_02085 449601 450335 - fumarate reductase part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration%3B FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit%2C respectively%3B FrdCD are the membrane components which interact with quinone and are involved in electron transfer%3B the catalytic subunits are similar to succinate dehydrogenase SdhAB gene gene410 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02085 LI89_02090 LI89_02090 LI89_02090 450328 452142 - fumarate reductase part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration%3B FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit%2C respectively%3B FrdCD are the membrane components which interact with quinone and are involved in electron transfer%3B the catalytic subunits are similar to succinate dehydrogenase SdhAB gene gene411 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02090 LI89_02095 LI89_02095 LI89_02095 452661 453638 + poxB regulator PoxA poxA%3B regulates pyruvate oxidase poxB gene gene412 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02095 LI89_02100 LI89_02100 LI89_02100 453722 457072 - mechanosensitive channel protein gene gene413 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02100 LI89_02105 LI89_02105 LI89_02105 457122 458003 - phosphatidylserine decarboxylase gene gene414 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02105 LI89_02110 LI89_02110 LI89_02110 458128 459180 - GTPase RsgA EngC%3B RsgA%3B CpgA%3B circularly permuted GTPase%3B ribosome small subunit-dependent GTPase A%3B has the pattern G4-G1-G3 as opposed to other GTPases%3B interacts strongly with 30S ribosome which stimulates GTPase activity gene gene415 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02110 LI89_02115 LI89_02115 LI89_02115 459358 459903 + oligoribonuclease 3'-5' exoribonuclease specific for small oligoribonuclotides gene gene416 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02115 LI89_02120 LI89_02120 LI89_02120 460213 460288 + tRNA-Gly tRNA gene417 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02120 LI89_02125 LI89_02125 LI89_02125 460381 460456 + tRNA-Gly tRNA gene418 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02125 LI89_02130 LI89_02130 LI89_02130 460533 460608 + tRNA-Gly tRNA gene419 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02130 LI89_02135 LI89_02135 LI89_02135 460951 462105 - [Fe-S]-binding protein gene gene420 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02135 LI89_02140 LI89_02140 LI89_02140 462104 463618 + carbohydrate kinase gene gene421 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02140 LI89_02145 LI89_02145 LI89_02145 463629 464099 + ADP-binding protein needed for nucleoid integrity%3B possibly involved in cell wall synthesis gene gene422 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02145 LI89_02150 LI89_02150 LI89_02150 464197 466053 + N-acetylmuramoyl-L-alanine amidase gene gene423 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02150 LI89_02155 LI89_02155 LI89_02155 466069 467976 + DNA mismatch repair protein gene gene424 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02155 LI89_02160 LI89_02160 miaA miaA 467969 468910 + tRNA delta(2)-isopentenylpyrophosphate transferase IPP transferase%3B isopentenyltransferase%3B involved in tRNA modification%3B in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil%3B further tRNA modifications may occur%3B mutations in miaA result in defects in translation efficiency and fidelity gene gene425 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02160 LI89_02165 LI89_02165 hfq hfq 469027 469332 + RNA-binding protein Hfq HF-I%2C host factor for RNA phage Q beta replication gene gene426 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02165 LI89_02170 LI89_02170 LI89_02170 469431 470732 + GTPase HflX involved in modulation of proteins HflK and HflC%3B part of the hflA locus (high frequency of lysogenization) which governs the lysis-lysogeny decision of bacteriophage lambda by controlling stability of the phage cII protein gene gene427 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02170 LI89_02175 LI89_02175 LI89_02175 470830 472113 + cell division protein FtsH with HflC inhibits proteolysis of lambda cII protein by FtsH gene gene428 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02175 LI89_02180 LI89_02180 LI89_02180 472117 473121 + cell division protein FtsH with HflK inhibits proteolysis of lambda cII protein by FtsH gene gene429 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02180 LI89_02185 LI89_02185 LI89_02185 473221 473421 + membrane protein gene gene430 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02185 LI89_02190 LI89_02190 LI89_02190 473521 474819 + adenylosuccinate synthetase catalyzes the formation of N6-(1%2C2%2C-dicarboxyethyl)-AMP from L-aspartate%2C inosine monophosphate and GTP in AMP biosynthesis gene gene431 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02190 LI89_02195 LI89_02195 LI89_02195 475099 475524 + transcriptional repressor NsrR negatively regulates the transcription of genes upregulated by nitrosative stress gene gene432 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02195 LI89_02200 LI89_02200 LI89_02200 475578 478133 + exoribonuclease R 3'-5'exoribonuclease that acts nonspecifically on poly(A)%2C poly(U) and ribosomal RNAs gene gene433 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02200 LI89_02205 LI89_02205 LI89_02205 478205 478945 + 23S rRNA methyltransferase Specifically methylates the ribose of guanosine 2251 in 23S rRNA gene gene434 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02205 LI89_02210 LI89_02210 LI89_02210 479311 480954 + isovaleryl-CoA dehydrogenase catalyzes the formation of 3-methylcrotonyl-CoA from isovaleryl-CoA gene gene435 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02210 LI89_02215 LI89_02215 LI89_02215 481027 481335 - biofilm stress and motility protein A in Escherichia coli%2C mutation of this gene affects biofilm maturation%2C stress response%2C and motility gene gene436 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02215 LI89_02220 LI89_02220 LI89_02220 481521 482270 + esterase YjfP%3B esterase activity towards palmitoyl-CoA and pNP-butyrate in vitro%3B unknown function and substrate in vivo gene gene437 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02220 LI89_02225 LI89_02225 LI89_02225 482355 482630 - hypothetical protein gene gene438 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02225 LI89_02230 LI89_02230 rpsF rpsF 483169 483561 + 30S ribosomal protein S6 binds cooperatively with S18 to the S15-16S complex%2C allowing platform assembly to continue with S11 and S21 gene gene439 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02230 LI89_02235 LI89_02235 LI89_02235 483567 483887 + primosomal replication protein N binds single-stranded DNA at the primosome assembly site gene gene440 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02235 LI89_02240 LI89_02240 rpsR rpsR 483892 484119 + 30S ribosomal protein S18 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA%3B helps stabilize the platform of the 30S subunit gene gene441 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02240 LI89_02245 LI89_02245 rplI rplI 484159 484611 + 50S ribosomal protein L9 in Escherichia coli this protein is wrapped around the base of the L1 stalk gene gene442 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02245 LI89_02250 LI89_02250 LI89_02250 484687 485133 - hypothetical protein gene gene443 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02250 LI89_02255 LI89_02255 LI89_02255 485291 485977 - lysine transporter LysM gene gene444 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02255 LI89_02265 LI89_02265 LI89_02265 486351 486971 + peptidylprolyl isomerase FKBP-type%3B rotamase%3B catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides gene gene445 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02265 LI89_02270 LI89_02270 LI89_02270 487056 487721 - iron-sulfur cluster repair di-iron protein Involved in anaerobic NO protection and iron metabolism gene gene446 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02270 LI89_02275 LI89_02275 cpdB cpdB 487849 489822 - 2'%2C 3'-cyclic nucleotide 2'-phosphodiesterase periplasmic enzyme%3B functions during ribonucleic acid degradation%3B 2'%2C3'-cyclic nucleotides are first converted to 3'-nucleotide and then cleaved to yield a ribonucleotide and a phosphate gene gene447 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02275 LI89_02280 LI89_02280 LI89_02280 490181 490921 + adenosine-3'(2')%2C5'-bisphosphate nucleotidase catalyzes the formation of AMP from adenosine-3'%2C5'-bisphosphate gene gene448 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02280 LI89_02285 LI89_02285 LI89_02285 490924 491487 - hypothetical protein gene gene449 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02285 LI89_02290 LI89_02290 LI89_02290 491811 492014 + hypothetical protein gene gene450 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02290 LI89_02295 LI89_02295 LI89_02295 492093 493424 - membrane protein gene gene451 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02295 LI89_02300 LI89_02300 LI89_02300 493591 494232 - methionine sulfoxide reductase A this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form%3B provides protection against oxidative stress gene gene452 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02300 LI89_02305 LI89_02305 LI89_02305 494504 496240 + membrane protein gene gene453 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02305 LI89_02310 LI89_02310 LI89_02310 496237 500121 + translocation and assembly module TamB gene gene454 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02310 LI89_02315 LI89_02315 LI89_02315 500124 500486 + gamma-glutamylcyclotransferase gene gene455 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02315 LI89_02320 LI89_02320 LI89_02320 500597 501124 - inorganic pyrophosphatase catalyzes the hydrolysis of pyrophosphate to phosphate gene gene456 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02320 LI89_02325 LI89_02325 LI89_02325 501414 502994 + chemotaxis protein gene gene457 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02325 LI89_02330 LI89_02330 LI89_02330 503058 504071 - fructose 1%2C6-bisphosphatase catalyzes the formation of D-fructose 6-phosphate from fructose-1%2C6-bisphosphate gene gene458 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02330 LI89_02335 LI89_02335 LI89_02335 504241 505626 + UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase ligates L-alanyl-gamma-D-glutamyl-meso-diaminopimelate to UDP-N-acetylmuramic acid for reincorporation into peptidoglycan gene gene459 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02335 LI89_02340 LI89_02340 LI89_02340 505880 506143 - hypothetical protein gene gene460 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02340 LI89_02345 LI89_02345 LI89_02345 506555 507025 - arginine repressor regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes gene gene461 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02345 LI89_02350 LI89_02350 LI89_02350 507489 508424 + malate dehydrogenase oxidizes malate to oxaloacetate gene gene462 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02350 LI89_02355 LI89_02355 LI89_02355 508498 508773 - DNA-binding protein gene gene463 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02355 LI89_02360 LI89_02360 LI89_02360 508957 509304 + DNA-binding protein gene gene464 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02360 LI89_02365 LI89_02365 LI89_02365 509365 510336 - octaprenyl diphosphate synthase gene gene465 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02365 LI89_02370 LI89_02370 rplU rplU 510596 510907 + 50S ribosomal protein L21 gene gene466 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02370 LI89_02375 LI89_02375 rpmA rpmA 510927 511184 + 50S ribosomal protein L27 involved in the peptidyltransferase reaction during translation gene gene467 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02375 LI89_02380 LI89_02380 LI89_02380 511271 512230 + membrane protein gene gene468 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02380 LI89_02385 LI89_02385 obgE obgE 512262 513434 + GTPase CgtA ObgE%3B essential GTPase%3B exhibits high exchange rate for GTP/GDP%3B associates with 50S ribosomal subunit%3B involved in regulation of chromosomal replication gene gene469 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02385 LI89_02390 LI89_02390 LI89_02390 513538 514599 - sensor protein BasS/PmrB gene gene470 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02390 LI89_02395 LI89_02395 LI89_02395 514599 515258 - XRE family transcriptional regulator gene gene471 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02395 LI89_02400 LI89_02400 LI89_02400 515264 516712 - D-alanyl-D-alanine carboxypeptidase penicillin binding protein 4%3B penicillin sensitive%3B catalyzes the formation of D-alanine from D-alanyl-D-alanine%3B one of four%2C DD-carboxypeptidase low-molecular weight penicillin-binding proteins that remove terminal D-alanine from pentapeptide side chains gene gene472 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02400 LI89_02405 LI89_02405 greA greA 516972 517448 + transcription elongation factor GreA necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites%3B arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through%2C resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus gene gene473 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02405 LI89_02410 LI89_02410 LI89_02410 517577 517870 - RNA-binding protein YhbY RNA binding protein found associated to pre-50S subunit of the ribosome%3B putative role in ribosome assembly%3B necessary for optimal growth but not cell viability gene gene474 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02410 LI89_02415 LI89_02415 rrmJ rrmJ 518017 518646 + 23S rRNA methyltransferase Specifically methylates the uridine in position 2552 of 23S rRNA in the fully assembled 50S ribosomal subunit gene gene475 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02415 LI89_02420 LI89_02420 hflB hflB 518703 520637 + ATP-dependent metalloprotease inner membrane metalloprotease%3B may be involved in degradation of aberrant cytoplasmic and membrane proteins gene gene476 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02420 LI89_02425 LI89_02425 folP folP 520952 521785 + dihydropteroate synthase catalyzes the formation of dihydropteroate from 2-amino-4-hydroxy-6-hydroxymethyl-7%2C8-dihydropteridine diphosphate and 4-aminobenzoate gene gene477 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02425 LI89_02430 LI89_02430 glmM glmM 521795 523135 + phosphoglucosamine mutase catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate gene gene478 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02430 LI89_02435 LI89_02435 secG secG 523359 523694 + preprotein translocase subunit SecG gene gene479 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02435 LI89_02440 LI89_02440 LI89_02440 523786 523872 + tRNA-Leu tRNA gene480 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02440 LI89_02445 LI89_02445 LI89_02445 523933 524009 + tRNA-Met tRNA gene481 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02445 LI89_02450 LI89_02450 LI89_02450 524225 524677 + ribosome maturation protein RimP required for the maturation of the 30S ribosomal subunits gene gene482 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02450 LI89_02455 LI89_02455 nusA nusA 524699 526186 + transcription elongation factor NusA modifies transcription through interactions with RNA polymerase affecting elongation%2C readthrough%2C termination%2C and antitermination gene gene483 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02455 LI89_02460 LI89_02460 infB infB 526211 528889 + translation initiation factor IF-2 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex gene gene484 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02460 LI89_02465 LI89_02465 rbfA rbfA 528956 529366 + ribosome-binding factor A associates with free 30S ribosomal subunits%3B essential for efficient processing of 16S rRNA%3B in Escherichia coli rbfA is induced by cold shock gene gene485 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02465 LI89_02470 LI89_02470 truB truB 529366 530355 + tRNA pseudouridine synthase B catalyzes isomerization of specific uridines in RNA to pseudouridine%3B responsible for residues in T loops of many tRNAs gene gene486 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02470 LI89_02475 LI89_02475 LI89_02475 530477 530746 + 30S ribosomal protein S15 gene gene487 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02475 LI89_02480 LI89_02480 LI89_02480 531009 533129 + polynucleotide phosphorylase/polyadenylase gene gene488 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02480 LI89_02485 LI89_02485 LI89_02485 533252 534136 + lipoprotein NlpI lipoprotein that appears to be involved in cell division%3B interacts with the periplasmic protease Prc and may be activated by protease processing gene gene489 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02485 LI89_02490 LI89_02490 LI89_02490 534322 536298 + DEAD/DEAH box helicase participates in the assembly of the large subunit of the ribosome%3B plays a key role in optimal cell growth at low temperature and is required for normal cell division gene gene490 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02490 LI89_02495 LI89_02495 LI89_02495 536652 536921 + hypothetical protein gene gene491 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02495 LI89_02500 LI89_02500 LI89_02500 537339 538361 - hypothetical protein gene gene492 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02500 LI89_02505 LI89_02505 LI89_02505 538768 539928 + acriflavine resistance protein E gene gene493 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02505 LI89_02510 LI89_02510 LI89_02510 539932 543057 + multidrug transporter gene gene494 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02510 LI89_02515 LI89_02515 LI89_02515 543059 544465 + transporter gene gene495 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02515 LI89_02520 LI89_02520 LI89_02520 545060 546385 + hypothetical protein gene gene496 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02520 LI89_02525 LI89_02525 LI89_02525 546435 547751 + membrane protein gene gene497 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02525 LI89_02530 LI89_02530 LI89_02530 547813 548691 - protease gene gene498 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02530 LI89_02535 LI89_02535 LI89_02535 548703 549698 - protease gene gene499 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02535 LI89_02540 LI89_02540 LI89_02540 549905 550426 + SCP-2 sterol transfer family protein gene gene500 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02540 LI89_02545 LI89_02545 LI89_02545 550420 550923 + acetyltransferase gene gene501 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02545 LI89_02550 LI89_02550 LI89_02550 550910 551203 - GIY-YIG nuclease gene gene502 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02550 LI89_02555 LI89_02555 potE potE 551340 552656 - putrescine transporter catalyzes the uptake of putrescine via a proton symport mechanism%2C as well as the efflux of putrescine by a putrescine/ornithine antiport system gene gene503 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02555 LI89_02560 LI89_02560 LI89_02560 552747 554912 - ornithine decarboxylase gene gene504 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02560 LI89_02570 LI89_02570 LI89_02570 556058 558082 - alginate lyase gene gene505 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02570 LI89_02575 LI89_02575 LI89_02575 558106 559338 - alginate lyase gene gene506 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02575 LI89_02580 LI89_02580 LI89_02580 559906 561219 + sugar ABC transporter substrate-binding protein gene gene507 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02580 LI89_02585 LI89_02585 LI89_02585 561227 562111 + sugar ABC transporter permease gene gene508 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02585 LI89_02590 LI89_02590 LI89_02590 562130 562969 + sugar ABC transporter permease gene gene509 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02590 LI89_02595 LI89_02595 LI89_02595 562981 564096 + sugar ABC transporter ATP-binding protein gene gene510 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02595 LI89_02600 LI89_02600 LI89_02600 564111 565277 + alginate lyase gene gene511 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02600 LI89_02605 LI89_02605 LI89_02605 565351 565803 + hypothetical protein gene gene512 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02605 LI89_02610 LI89_02610 LI89_02610 566296 567285 + hypothetical protein gene gene513 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02610 LI89_02615 LI89_02615 LI89_02615 567975 568604 + hypothetical protein gene gene514 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02615 LI89_02620 LI89_02620 phnP phnP 568605 569372 - carbon-phosphorus lyase complex accessory protein required for the use of phosphonates and phosphite as phosphorus sources gene gene515 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02620 LI89_02625 LI89_02625 LI89_02625 569363 569941 - ribose-phosphate pyrophosphokinase gene gene516 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02625 LI89_02630 LI89_02630 LI89_02630 569941 571089 - phosphonate metabolism protein PhnM gene gene517 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02630 LI89_02635 LI89_02635 LI89_02635 571086 571820 - phosphonate ABC transporter ATP-binding protein gene gene518 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02635 LI89_02640 LI89_02640 phnK phnK 571834 572640 - phosphonate C-P lyase system protein PhnK gene gene519 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02640 LI89_02645 LI89_02645 LI89_02645 572637 573503 - carbon-phosphorus lyase complex subunit PhnJ required for use of phosphonate and phosphite gene gene520 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02645 LI89_02650 LI89_02650 LI89_02650 573496 574608 - carbon-phosphorus lyase complex subunit PhnI required for the use of phosphonate and phosphite gene gene521 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02650 LI89_02655 LI89_02655 phnH phnH 574608 575189 - carbon-phosphorus lyase complex subunit gene gene522 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02655 LI89_02660 LI89_02660 LI89_02660 575189 575665 - phosphonate C-P lyase gene gene523 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02660 LI89_02665 LI89_02665 LI89_02665 575666 576391 - phosphonate metabolism transcriptional regulator PhnF may be involved in phosphonate uptake and biodegradation gene gene524 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02665 LI89_02670 LI89_02670 LI89_02670 576776 577879 + hypothetical protein gene gene525 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02670 LI89_02675 LI89_02675 LI89_02675 578112 579848 + Heme/hemopexin utilization protein B precursor gene gene526 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02675 LI89_02680 LI89_02680 LI89_02680 579993 580457 - ribonucleoside-triphosphate reductase activates anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions gene gene527 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02680 LI89_02685 LI89_02685 LI89_02685 580463 582601 - ribonucleoside-triphosphate reductase Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates gene gene528 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02685 LI89_02690 LI89_02690 LI89_02690 582885 583793 - LysR family transcriptional regulator gene gene529 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02690 LI89_02695 LI89_02695 LI89_02695 583896 584420 + oxidoreductase gene gene530 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02695 LI89_02700 LI89_02700 LI89_02700 584523 584792 + hypothetical protein gene gene531 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02700 LI89_02705 LI89_02705 LI89_02705 584810 585139 + hypothetical protein gene gene532 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02705 LI89_02710 LI89_02710 LI89_02710 585195 585911 - peptide ABC transporter ATP-binding protein gene gene533 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02710 LI89_02715 LI89_02715 LI89_02715 585898 586776 - peptide ABC transporter ATP-binding protein gene gene534 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02715 LI89_02720 LI89_02720 LI89_02720 586769 587608 - peptide ABC transporter permease gene gene535 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02720 LI89_02725 LI89_02725 LI89_02725 587610 588659 - peptide ABC transporter permease gene gene536 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02725 LI89_02730 LI89_02730 LI89_02730 588709 590277 - ABC transporter substrate-binding protein gene gene537 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02730 LI89_02735 LI89_02735 LI89_02735 590627 591085 + toxin-antitoxin biofilm protein TabA gene gene538 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02735 LI89_02740 LI89_02740 LI89_02740 591258 592265 - ornithine carbamoyltransferase catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway gene gene539 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02740 LI89_02745 LI89_02745 LI89_02745 592436 592867 + regulator gene gene540 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02745 LI89_02750 LI89_02750 LI89_02750 593074 593577 - acetyltransferase gene gene541 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02750 LI89_02755 LI89_02755 LI89_02755 593712 596540 - valyl-tRNA synthase gene gene542 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02755 LI89_02760 LI89_02760 LI89_02760 596623 597072 - DNA polymerase III subunit chi binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB gene gene543 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02760 LI89_02765 LI89_02765 LI89_02765 597251 598762 - multifunctional aminopeptidase A catalyzes the removal of N-terminal amino acids preferably from various peptides%3B a cyteinylglycinase%2C transcription regulator and site-specific recombination factor gene gene544 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02765 LI89_02770 LI89_02770 LI89_02770 599042 600136 + lipopolysaccharide ABC transporter permease with LptBGC is involved in lipopolysaccharide export gene gene545 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02770 LI89_02775 LI89_02775 LI89_02775 600136 601206 + lipopolysaccharide ABC transporter permease with LptABCF is involved in the transport of lipopolysaccharides gene gene546 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02775 LI89_02780 LI89_02780 LI89_02780 601308 601392 + tRNA-Leu tRNA gene547 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02780 LI89_02785 LI89_02785 LI89_02785 601581 602831 + integrase gene gene548 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02785 LI89_02790 LI89_02790 LI89_02790 603018 604904 + DNA methyltransferase gene gene549 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02790 LI89_02795 LI89_02795 LI89_02795 604915 607881 + restriction endonuclease subunit R gene gene550 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02795 LI89_02800 LI89_02800 LI89_02800 607942 609255 + hypothetical protein gene gene551 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02800 LI89_02805 LI89_02805 LI89_02805 609315 610631 - prepilin cleavage protein gene gene552 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02805 LI89_02810 LI89_02810 LI89_02810 610829 611113 - conjugal transfer protein TraD gene gene553 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02810 LI89_02815 LI89_02815 LI89_02815 611123 611359 - hypothetical protein gene gene554 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02815 LI89_02825 LI89_02825 LI89_02825 612110 613507 + conjugal transfer protein gene gene555 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02825 LI89_02835 LI89_02835 LI89_02835 614665 615219 - dNA-directed RNA polymerase%2C beta subunit gene gene556 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02835 LI89_02840 LI89_02840 LI89_02840 615235 615816 - tRNA_anti-like family protein gene gene557 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02840 LI89_02850 LI89_02850 LI89_02850 617824 618138 - hypothetical protein gene gene558 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02850 LI89_02855 LI89_02855 LI89_02855 618272 618571 - hypothetical protein gene gene559 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02855 LI89_02860 LI89_02860 LI89_02860 618657 618857 - dipicolinate synthase gene gene560 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02860 LI89_02865 LI89_02865 LI89_02865 619381 620091 - hypothetical protein gene gene561 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02865 LI89_02875 LI89_02875 LI89_02875 620898 624197 - helicase gene gene562 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02875 LI89_02880 LI89_02880 LI89_02880 624746 625156 + acetyltransferase gene gene563 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02880 LI89_02885 LI89_02885 LI89_02885 625182 625871 + LuxR family transcriptional regulator gene gene564 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02885 LI89_02890 LI89_02890 LI89_02890 625908 627215 + allantoin permease gene gene565 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02890 LI89_02895 LI89_02895 LI89_02895 627840 629147 + allantoin permease gene gene566 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02895 LI89_02900 LI89_02900 LI89_02900 629292 630056 + restriction endonuclease gene gene567 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02900 LI89_02905 LI89_02905 LI89_02905 630113 630595 - endopeptidase gene gene568 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02905 LI89_02910 LI89_02910 LI89_02910 630720 630995 - hypothetical protein gene gene569 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02910 LI89_02915 LI89_02915 LI89_02915 631733 632023 - autoinducer-2 (AI-2) modifying protein LsrG gene gene570 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02915 LI89_02920 LI89_02920 LI89_02920 632085 632960 - autoinducer 2 aldolase involved in autoinducer 2 transport and processing gene gene571 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02920 LI89_02925 LI89_02925 LI89_02925 633016 634050 - autoinducer 2-binding protein lsrB with lsrACD is involved in the transport of autoinducer 2 into the cell gene gene572 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02925 LI89_02930 LI89_02930 LI89_02930 634107 635102 - autoinducer 2 import system permease LsrD with IsrABC is involved with autoinducer 2 import gene gene573 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02930 LI89_02935 LI89_02935 LI89_02935 635099 636175 - ABC transporter permease with LsrADB is involved in the transport of autoindiuce 2 gene gene574 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02935 LI89_02940 LI89_02940 LI89_02940 636169 637734 - ABC transporter ATP-binding protein with LsrCDB is involved in the transport of autoindiuce 2 gene gene575 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02940 LI89_02945 LI89_02945 LI89_02945 637985 638977 + transcriptional regulator LsrR regulates the transcription of lsr genes%3B involved in autoinducer 2 uptake%2C biofilm formation and stress responses gene gene576 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02945 LI89_02950 LI89_02950 LI89_02950 639070 640650 + autoinducer kinase gene gene577 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02950 LI89_02955 LI89_02955 LI89_02955 640966 642123 + lipopolysaccharide biosynthesis protein gene gene578 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02955 LI89_02960 LI89_02960 LI89_02960 642189 643433 + O-antigen biosynthesis protein gene gene579 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02960 LI89_02970 LI89_02970 LI89_02970 644690 646198 + amino acid APC transporter gene gene580 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02970 LI89_02975 LI89_02975 LI89_02975 646214 647497 + arginine deiminase gene gene581 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02975 LI89_02980 LI89_02980 LI89_02980 647996 649078 + membrane protein gene gene582 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02980 LI89_02985 LI89_02985 LI89_02985 649078 652164 + multidrug transporter AcrB gene gene583 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02985 LI89_02990 LI89_02990 gldA gldA 652475 653569 + glycerol dehydrogenase forms dimers and octamers%3B involved in conversion of glycerol to dihydroxy-acetone gene gene584 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02990 LI89_02995 LI89_02995 LI89_02995 653664 654731 + dihydroxyacetone kinase with DhaL and DhaM forms dihydroxyacetone kinase%2C which is responsible for phosphorylating dihydroxyacetone%3B DhaK is the dihydroxyacetone binding subunit of the dihydroxyacetone kinase gene gene585 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_02995 LI89_03000 LI89_03000 LI89_03000 654749 655381 + dihydroxyacetone kinase with DhaK and DhaM catalyzes the phosphorylation of dihydroxyacetone gene gene586 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03000 LI89_03005 LI89_03005 LI89_03005 655416 656849 + dihydroxyacetone kinase gene gene587 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03005 LI89_03010 LI89_03010 LI89_03010 656895 658100 - glycosyl transferase gene gene588 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03010 LI89_03015 LI89_03015 LI89_03015 658280 659989 - transferase gene gene589 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03015 LI89_03020 LI89_03020 LI89_03020 660019 661521 - oxidoreductase gene gene590 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03020 LI89_03025 LI89_03025 LI89_03025 661546 662988 - hypothetical protein gene gene591 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03025 LI89_03030 LI89_03030 LI89_03030 663005 664168 - transporter gene gene592 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03030 LI89_03035 LI89_03035 LI89_03035 664209 665075 - hypothetical protein gene gene593 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03035 LI89_03040 LI89_03040 LI89_03040 665580 666665 + pectin esterase gene gene594 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03040 LI89_03045 LI89_03045 LI89_03045 666668 668587 - transcriptional regulator Positively regulates the dhaKLM operon from a sigma-70 promoter gene gene595 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03045 LI89_03050 LI89_03050 LI89_03050 668574 669608 - sucrose operon repressor gene gene596 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03050 LI89_03055 LI89_03055 LI89_03055 669655 671064 - glycosyl hydrolase family 32 gene gene597 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03055 LI89_03060 LI89_03060 LI89_03060 671064 672434 - PTS system sucrose-specific transporter subuits IIBC phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel gene gene598 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03060 LI89_03065 LI89_03065 LI89_03065 672503 673954 - porin gene gene599 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03065 LI89_03070 LI89_03070 LI89_03070 674340 675275 - fructokinase gene gene600 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03070 LI89_03075 LI89_03075 LI89_03075 675479 676624 + iron transporter gene gene601 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03075 LI89_03080 LI89_03080 LI89_03080 677123 679279 + amino acid ABC transporter substrate-binding protein gene gene602 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03080 LI89_03085 LI89_03085 LI89_03085 679720 680820 - diguanylate cyclase gene gene603 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03085 LI89_03090 LI89_03090 LI89_03090 681156 681431 + membrane protein gene gene604 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03090 LI89_03095 LI89_03095 LI89_03095 681509 681595 - tRNA-Leu tRNA gene605 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03095 LI89_03100 LI89_03100 LI89_03100 681660 681746 - tRNA-Leu tRNA gene606 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03100 LI89_03105 LI89_03105 LI89_03105 681872 682822 - transcriptional regulator gene gene607 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03105 LI89_03110 LI89_03110 LI89_03110 682939 683931 + aldo/keto reductase gene gene608 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03110 LI89_03115 LI89_03115 LI89_03115 683950 684993 - 16S rRNA methyltransferase gene gene609 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03115 LI89_03120 LI89_03120 LI89_03120 685106 685543 + DNA polymerase III subunit psi with the chi subunit binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB gene gene610 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03120 LI89_03125 LI89_03125 rimI rimI 685488 685931 + ribosomal-protein-alanine acetyltransferase alanine acetyltransferase that specifically acetylates ribosomal protein S18 gene gene611 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03125 LI89_03130 LI89_03130 prfC prfC 686182 687771 + peptide chain release factor 3 stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred%3B GDP/GTP-binding protein gene gene612 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03130 LI89_03135 LI89_03135 LI89_03135 688081 688695 + periplasmic protein gene gene613 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03135 LI89_03145 LI89_03145 LI89_03145 689139 690392 + phosphoesterase gene gene614 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03145 LI89_03150 LI89_03150 LI89_03150 690413 691210 + deoxyribonuclease YjjV gene gene615 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03150 LI89_03155 LI89_03155 LI89_03155 691409 692686 + nucleoside transporter NupC gene gene616 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03155 LI89_03160 LI89_03160 LI89_03160 693060 693857 + deoxyribose-phosphate aldolase catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate gene gene617 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03160 LI89_03165 LI89_03165 LI89_03165 693945 695267 + thymidine phosphorylase gene gene618 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03165 LI89_03170 LI89_03170 LI89_03170 695321 696544 + phosphopentomutase gene gene619 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03170 LI89_03175 LI89_03175 deoD deoD 696605 697324 + purine nucleoside phosphorylase catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate gene gene620 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03175 LI89_03180 LI89_03180 LI89_03180 697379 698056 - hypothetical protein gene gene621 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03180 LI89_03185 LI89_03185 serB serB 698167 699144 + phosphoserine phosphatase catalyzes the formation of serine from O-phosphoserine gene gene622 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03185 LI89_03190 LI89_03190 LI89_03190 699294 700676 + DNA repair protein RadA Sms%3B stabilizes the strand-invasion intermediate during the DNA repair%3B involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents gene gene623 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03190 LI89_03195 LI89_03195 LI89_03195 700714 701130 + hypothetical protein gene gene624 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03195 LI89_03200 LI89_03200 LI89_03200 701406 702410 - transposase gene gene625 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03200 LI89_03205 LI89_03205 LI89_03205 702546 702827 - hypothetical protein gene gene626 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03205 LI89_03210 LI89_03210 LI89_03210 703414 704691 + transcriptional regulator catalyzes the formation of NAD(+) from nicotinamide ribonucleotide%3B catalyzes the formation of nicotinamide mononucleotide from nicotinamide riboside%3B also has a regulatory function gene gene627 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03210 LI89_03215 LI89_03215 LI89_03215 704694 705695 - NADPH:quinone reductase gene gene628 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03215 LI89_03220 LI89_03220 LI89_03220 705841 706752 + LysR family transcriptional regulator gene gene629 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03220 LI89_03225 LI89_03225 LI89_03225 706862 708508 - ABC transporter ATP-binding protein ChvD%3B in Agrobacterium tumefaciens%2C mutations in both Walker boxes were found to affect virulence gene gene630 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03225 LI89_03230 LI89_03230 LI89_03230 708819 709328 - membrane protein gene gene631 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03230 LI89_03235 LI89_03235 LI89_03235 709334 710665 - DeoR faimly transcriptional regulator gene gene632 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03235 LI89_03240 LI89_03240 LI89_03240 710662 711294 - membrane protein gene gene633 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03240 LI89_03245 LI89_03245 LI89_03245 711501 714212 - carbonate dehydratase gene gene634 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03245 LI89_03250 LI89_03250 LI89_03250 714702 716621 + lytic murein transglycosylase catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine residues in peptidoglycan gene gene635 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03250 LI89_03255 LI89_03255 LI89_03255 716853 717185 + Trp operon repressor gene gene636 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03255 LI89_03260 LI89_03260 yjjX yjjX 717194 717721 - inositol monophosphatase pyrophosphatase%3B has activity against dUTP and dITP%3B the crystal structure of the Vibrio protein showed similarity to Methanococcus janaschii Mj0226%3B in Vibrio cholerae this gene is part of the Mba operon that is involved in regulation and maintenance of biofilms%3B in Escherichia coli overexpression of this gene leads to resistance to an HMP analog gene gene637 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03260 LI89_03265 LI89_03265 LI89_03265 717778 718425 + phosphoglycerate mutase catalyzes reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate gene gene638 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03265 LI89_03270 LI89_03270 LI89_03270 718422 719288 - transcriptional regulator AraC family%3B binds to the right arm of the replication origin oriC gene gene639 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03270 LI89_03275 LI89_03275 LI89_03275 719513 719980 + hypothetical protein gene gene640 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03275 LI89_03280 LI89_03280 LI89_03280 720172 720888 - TorR family transcriptional regulator gene gene641 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03280 LI89_03285 LI89_03285 LI89_03285 720991 721131 + hypothetical protein gene gene642 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03285 LI89_03290 LI89_03290 thrA thrA 722053 724512 + aspartate kinase multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine%3B functions in a number of amino acid biosynthetic pathways gene gene643 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03290 LI89_03295 LI89_03295 LI89_03295 724515 725444 + serine kinase gene gene644 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03295 LI89_03300 LI89_03300 LI89_03300 725448 726737 + threonine synthase gene gene645 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03300 LI89_03305 LI89_03305 LI89_03305 726791 727567 - hypothetical protein gene gene646 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03305 LI89_03310 LI89_03310 LI89_03310 728103 729056 + transaldolase gene gene647 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03310 LI89_03315 LI89_03315 mogA mogA 729214 729801 + molybdenum cofactor biosynthesis protein MogA forms a trimer%3B related to eukaryotic protein gephyrin%3B functions during molybdenum cofactor biosynthesis gene gene648 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03315 LI89_03320 LI89_03320 LI89_03320 729930 731297 + MFS transporter gene gene649 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03320 LI89_03325 LI89_03325 LI89_03325 731372 733822 - crystallin gene gene650 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03325 LI89_03330 LI89_03330 LI89_03330 734058 734651 - hypothetical protein gene gene651 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03330 LI89_03335 LI89_03335 dnaK dnaK 735024 736934 + molecular chaperone DnaK heat shock protein 70%3B assists in folding of nascent polypeptide chains%3B refolding of misfolded proteins%3B utilizes ATPase activity to help fold%3B co-chaperones are DnaJ and GrpE%3B multiple copies in some bacteria gene gene652 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03335 LI89_03340 LI89_03340 LI89_03340 737046 738176 + molecular chaperone DnaJ chaperone Hsp40%3B co-chaperone with DnaK%3B Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins%2C also in an autonomous%2C dnaK-independent fashion gene gene653 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03340 LI89_03345 LI89_03345 nhaA nhaA 738407 739585 + pH-dependent sodium/proton antiporter exports sodium by using the electrochemical proton gradient to allow protons into the cell%3B functions in adaptation to high salinity and alkaline pH%3B activity increases at higher pH%3B downregulated at acidic pH gene gene654 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03345 LI89_03350 LI89_03350 nhaR nhaR 739736 740635 + transcriptional regulator Na+/H+ antiporter regulatory protein%3B activates the genes nhaA and osmC gene gene655 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03350 LI89_03355 LI89_03355 rpsT rpsT 740779 741042 - 30S ribosomal protein S20 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase gene gene656 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03355 LI89_03360 LI89_03360 LI89_03360 741456 742394 + FMN adenylyltransferase gene gene657 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03360 LI89_03365 LI89_03365 ileS ileS 742426 745242 + isoleucine--tRNA ligase IleRS%3B catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile)%3B since isoleucine and other amino acids such as valine are similar%2C there are additional editing function in this enzyme%3B one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile)%3B there are two active sites%2C one for aminoacylation and one for editing%3B class-I aminoacyl-tRNA synthetase family type 1 subfamily%3B some organisms carry two different copies of this enzyme gene gene658 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03365 LI89_03370 LI89_03370 lspA lspA 745242 745751 + lipoprotein signal peptidase lipoprotein signal peptidase%3B integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis gene gene659 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03370 LI89_03375 LI89_03375 LI89_03375 745753 746238 + peptidylprolyl isomerase rotamase%3B accelerates isomerization of the peptidyl prolyl bond%2C involved in the folding of proteases gene gene660 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03375 LI89_03380 LI89_03380 ispH ispH 746219 747172 + 4-hydroxy-3-methylbut-2-enyl diphosphate reductase catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP)%3B functions in the nonmevalonate isoprenoid biosynthesis pathway gene gene661 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03380 LI89_03385 LI89_03385 LI89_03385 747508 748329 + dihydrodipicolinate reductase catalyzes the reduction of 2%2C3-dihydrodipicolinate to 2%2C3%2C4%2C5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis gene gene662 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03385 LI89_03390 LI89_03390 LI89_03390 748802 749965 + carbamoyl phosphate synthase small subunit catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways%3B forms an octamer composed of four CarAB dimers gene gene663 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03390 LI89_03395 LI89_03395 carB carB 749982 753215 + carbamoyl phosphate synthase large subunit four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate%3B CarB is responsible for the amidotransferase activity gene gene664 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03395 LI89_03400 LI89_03400 LI89_03400 753413 754027 - lysine transporter LysE gene gene665 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03400 LI89_03405 LI89_03405 LI89_03405 754179 754976 + membrane protein gene gene666 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03405 LI89_03410 LI89_03410 LI89_03410 754976 755440 + hypothetical protein gene gene667 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03410 LI89_03415 LI89_03415 folA folA 755590 756072 + dihydrofolate reductase catalyzes the reduction of dihydrofolate to tetrahydrofolate gene gene668 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03415 LI89_03420 LI89_03420 apaH apaH 756152 757030 - diadenosine tetraphosphatase hydrolyzes P(1)%2CP(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP gene gene669 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03420 LI89_03425 LI89_03425 apaG apaG 757045 757422 - heavy metal transporter protein associated with Co2+ and Mg2+ efflux gene gene670 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03425 LI89_03430 LI89_03430 ksgA ksgA 757436 758254 - 16S rRNA methyltransferase in Escherichia coli this enzyme catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA%3B mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin%3B members of this protein family have secondary functions gene gene671 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03430 LI89_03435 LI89_03435 pdxA pdxA 758247 759242 - 4-hydroxythreonine-4-phosphate dehydrogenase catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate) gene gene672 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03435 LI89_03440 LI89_03440 LI89_03440 759229 760530 - peptidylprolyl isomerase Chaperone involved in the folding of extracytoplasmic proteins%2C especially OmpA%2C OmpF and LamB gene gene673 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03440 LI89_03445 LI89_03445 LI89_03445 760598 762961 - LPS biosynthesis protein is involved in outer membrane permeability gene gene674 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03445 LI89_03450 LI89_03450 djlA djlA 763146 763973 + Dna-J like membrane chaperone protein functions as a co-chaperone with DnaK%3B involved in regulation of colanic acid capsule%3B inner membrane protein%3B dimerized via transmembrane domain%3B J-like domain is cytoplasmic and can functionally substitute for DnaJ%3B stimulates synthesis of colanic acid mucoid capsule through the RcsB/C signal transduction system gene gene675 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03450 LI89_03455 LI89_03455 LI89_03455 764059 764679 - 23S rRNA pseudouridylate synthase catalyzes the synthesis of pseudouridine from uracil-746 in 23S ribosomal RNA and from uracil-32 in the anticodon stem and loop of transfer RNAs gene gene676 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03455 LI89_03460 LI89_03460 LI89_03460 765148 768222 - adhesin gene gene677 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03460 LI89_03465 LI89_03465 LI89_03465 769212 772118 - ATP-dependent helicase transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP%2C when it is trapped or immobilized on tightly supercoiled DNA gene gene678 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03465 LI89_03475 LI89_03475 LI89_03475 772256 774628 - DNA polymerase II Has polymerase%2C DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C gene gene679 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03475 LI89_03480 LI89_03480 LI89_03480 774824 775591 + membrane protein gene gene680 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03480 LI89_03485 LI89_03485 thiQ thiQ 775724 776428 - thiamine ABC transporter ATP-binding protein with TbpA and ThiP is part of the thiamine and TPP transport system gene gene681 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03485 LI89_03490 LI89_03490 thiP thiP 776415 778022 - thiamine ABC transporter permease permease%3B with TbpA and ThiQ functions in transport of thiamine and thiamine pyrophosphate into the cell%3B repressed in presence of exogenous thiamine gene gene682 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03490 LI89_03495 LI89_03495 tbpA tbpA 777998 778987 - thiamine ABC transporter substrate-binding protein part of the thiamine and TPP transport system tbpA-thiPQ gene gene683 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03495 LI89_03505 LI89_03505 LI89_03505 780259 780594 - hypothetical protein gene gene684 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03505 LI89_03510 LI89_03510 LI89_03510 780744 782405 - transcriptional regulator SgrR activates sgrS under glucose-phosphate stress conditions gene gene685 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03510 LI89_03515 LI89_03515 LI89_03515 782531 783430 + pyruvate formate lyase-activating protein gene gene686 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03515 LI89_03520 LI89_03520 LI89_03520 783435 785867 + formate acetyltransferase gene gene687 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03520 LI89_03525 LI89_03525 LI89_03525 786129 787310 + sugar transporter gene gene688 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03525 LI89_03530 LI89_03530 LI89_03530 787337 788599 - tryptophan permease tryptophan transporter of high affinity gene gene689 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03530 LI89_03535 LI89_03535 tnaA tnaA 788708 790108 - cysteine desulfhydrase tryptophan indole-lyase%3B catalyzes the formation of indole and pyruvate from tryptophan%3B also has xysteine desulfhydrase activity gene gene690 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03535 LI89_03540 LI89_03540 LI89_03540 790263 790361 - tryptophanase gene gene691 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03540 LI89_03545 LI89_03545 leuD leuD 790660 791280 - isopropylmalate isomerase catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis%3B forms a heterodimer of LeuC/D gene gene692 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03545 LI89_03550 LI89_03550 LI89_03550 791295 792725 - isopropylmalate isomerase dehydratase component%2C catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate gene gene693 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03550 LI89_03555 LI89_03555 LI89_03555 792727 793818 - 3-isopropylmalate dehydrogenase gene gene694 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03555 LI89_03560 LI89_03560 LI89_03560 793821 795383 - 2-isopropylmalate synthase gene gene695 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03560 LI89_03565 LI89_03565 leuO leuO 796487 797443 + transcriptional regulator activator for leuABCD operon%3B member of LysR family of transcriptional activators gene gene696 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03565 LI89_03570 LI89_03570 LI89_03570 797776 799575 + long-chain fatty acid--CoA ligase gene gene697 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03570 LI89_03575 LI89_03575 LI89_03575 800024 801751 + acetolactate synthase 3 catalytic subunit catalyzes the formation of 2-acetolactate from pyruvate%2C leucine sensitive gene gene698 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03575 LI89_03580 LI89_03580 ilvH ilvH 801754 802248 + acetolactate synthase 3 regulatory subunit with IlvI catalyzes the formation of 2-acetolactate from pyruvate%2C the small subunit is required for full activity and valine sensitivity%3B E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates%2C valine sensitivity and affinity for cofactors%3B also known as acetolactate synthase 3 small subunit gene gene699 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03580 LI89_03585 LI89_03585 LI89_03585 802472 803476 + transcriptional regulator binds D-fructose as an inducer%3B involved in regulation of operons for central pathways of carbon metabolism gene gene700 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03585 LI89_03590 LI89_03590 LI89_03590 803532 803972 - membrane protein gene gene701 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03590 LI89_03595 LI89_03595 LI89_03595 804896 805354 + cell division protein MraZ gene gene702 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03595 LI89_03600 LI89_03600 LI89_03600 805357 806319 + 16S rRNA methyltransferase gene gene703 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03600 LI89_03605 LI89_03605 LI89_03605 806316 806636 + cell division protein FtsL gene gene704 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03605 LI89_03610 LI89_03610 LI89_03610 806697 808460 + cell division protein FtsI penicillin-binding protein 3%3B transpeptidase involved in septal peptidoglycan synthesis gene gene705 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03610 LI89_03615 LI89_03615 murE murE 808447 809934 + UDP-N-acetylmuramoylalanyl-D-glutamate--2%2C6-diaminopimelate ligase involved in cell wall formation%3B peptidoglycan synthesis%3B cytoplasmic enzyme%3B catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate gene gene706 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03615 LI89_03620 LI89_03620 murF murF 809931 811295 + UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase gene gene707 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03620 LI89_03625 LI89_03625 mraY mraY 811289 812371 + phospho-N-acetylmuramoyl-pentapeptide-transferase First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan gene gene708 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03625 LI89_03630 LI89_03630 murD murD 812374 813708 + UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase UDP-N-acetylmuramoylalanine--D-glutamate ligase%3B involved in peptidoglycan biosynthesis%3B cytoplasmic%3B catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation gene gene709 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03630 LI89_03635 LI89_03635 LI89_03635 813708 814910 + cell division protein FtsW integral membrane protein involved in stabilizing FstZ ring during cell division gene gene710 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03635 LI89_03640 LI89_03640 murG murG 814907 815974 + UDP-diphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase N-acetylglucosaminyl transferase%3B UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase%3B involved in cell wall formation%3B inner membrane-associated%3B last step of peptidoglycan synthesis gene gene711 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03640 LI89_03645 LI89_03645 LI89_03645 816067 817542 + UDP-N-acetylmuramate--alanine ligase gene gene712 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03645 LI89_03650 LI89_03650 ddl ddl 817535 818455 + D-alanine--D-alanine ligase D-alanine--D-alanine ligase%3B DdlA%3B DdlB%3B cytoplasmic%3B catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis%3B there are two forms of this enzyme in Escherichia coli gene gene713 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03650 LI89_03655 LI89_03655 LI89_03655 818457 819314 + cell division protein FtsQ involved in septum formation gene gene714 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03655 LI89_03660 LI89_03660 ftsA ftsA 819311 820567 + cell division protein FtsA ATP-binding involved in recruitment of FtsK to Z ring%3B essential cell division protein%3B colocalizes with FtsZ through direct interaction to the septal ring structure%3B structurally similar to eukaryotic actin%3B binds directly to the cell membrane gene gene715 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03660 LI89_03665 LI89_03665 LI89_03665 820640 821791 + cell division protein FtsZ GTPase%3B similar structure to tubulin%3B forms ring-shaped polymers at the site of cell division%3B other proteins such as FtsA%2C ZipA%2C and ZapA%2C interact with and regulate FtsZ function gene gene716 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03665 LI89_03670 LI89_03670 lpxC lpxC 821892 822812 + UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase zinc-dependent%3B catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis gene gene717 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03670 LI89_03675 LI89_03675 LI89_03675 822815 823339 - hypothetical protein gene gene718 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03675 LI89_03680 LI89_03680 LI89_03680 823368 823901 + Secretion monitor gene gene719 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03680 LI89_03685 LI89_03685 secA secA 823978 826692 + preprotein translocase subunit SecA functions in protein export%3B can interact with acidic membrane phospholipids and the SecYEG protein complex%3B binds to preproteins%3B binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein%3B ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane%3B additional proteins SecD/F/YajC aid SecA recycling%3B exists in an equilibrium between monomers and dimers%3B may possibly form higher order oligomers%3B proteins in this cluster correspond SecA1%3B SecA2 is not essential and seems to play a role in secretion of a subset of proteins gene gene720 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03685 LI89_03690 LI89_03690 LI89_03690 826826 827212 + nucleoside triphosphate hydrolase gene gene721 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03690 LI89_03695 LI89_03695 LI89_03695 827284 827490 - DNA gyrase inhibitor inhibits supercoiling by DNA gyrase by binding to the GyrB subunit gene gene722 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03695 LI89_03700 LI89_03700 LI89_03700 827535 828287 - hypothetical protein gene gene723 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03700 LI89_03705 LI89_03705 coaE coaE 828284 828904 - dephospho-CoA kinase catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A%3B involved in coenzyme A biosynthesis gene gene724 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03705 LI89_03710 LI89_03710 LI89_03710 829198 830241 + guanosine 5'-monophosphate oxidoreductase catalyzes the NADPH-dependent deamination of GMP to inosine monophosphate gene gene725 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03710 LI89_03715 LI89_03715 LI89_03715 830377 831576 - type IV pilin biogenesis protein gene gene726 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03715 LI89_03720 LI89_03720 LI89_03720 831573 833039 - transporter HofB gene gene727 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03720 LI89_03725 LI89_03725 LI89_03725 833044 833478 - major pilin subunit gene gene728 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03725 LI89_03730 LI89_03730 LI89_03730 833683 834591 - nicotinate-nucleotide pyrophosphorylase catalyzes the formation of pyridine-2%2C3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide gene gene729 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03730 LI89_03735 LI89_03735 LI89_03735 834710 835285 + N-acetyl-anhydromuranmyl-L-alanine amidase gene gene730 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03735 LI89_03740 LI89_03740 LI89_03740 835429 836283 + regulatory protein AmpE involved in regulation of beta-lactamase%3B putative signaling protein gene gene731 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03740 LI89_03745 LI89_03745 LI89_03745 836443 837807 - aromatic amino acid transporter gene gene732 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03745 LI89_03750 LI89_03750 pdhR pdhR 838493 839257 + transcriptional regulator PdhR activates lctPRD operon%3B autoregulates itself through repression of pdhR-aceEF-lpdA operon%3B regulates pyruvate dehydrogenase complex gene gene733 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03750 LI89_03755 LI89_03755 aceE aceE 839434 842097 + pyruvate dehydrogenase E1 component%3B part of pyruvate dehydrogenase%3B forms a complex with DlaT and LpdC gene gene734 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03755 LI89_03760 LI89_03760 aceF aceF 842111 843982 + pyruvate dehydrogenase E2 component of pyruvate dehydrogenase multienzyme complex%3B in Escherichia coli AceF contains three N-terminal lipoyl domains gene gene735 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03760 LI89_03765 LI89_03765 LI89_03765 844233 845660 + dihydrolipoamide dehydrogenase E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex%3B catalyzes the oxidation of dihydrolipoamide to lipoamide gene gene736 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03765 LI89_03770 LI89_03770 LI89_03770 845742 847094 - hypothetical protein gene gene737 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03770 LI89_03775 LI89_03775 LI89_03775 847276 848283 - AraC family transcriptional regulator gene gene738 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03775 LI89_03780 LI89_03780 LI89_03780 848510 850804 + outer membrane receptor protein Fep%3B Cbt%3B Cbr%3B FeuB%3B FepA%3B PfeA%3B IroN%3B BfeA%3B outer membrane receptor of ferric enterobactin and colicins B and D%3B interacts with the TonB-ExbBD complex which catalyzes the translocation of the siderophore to the periplasmic space gene gene739 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03780 LI89_03785 LI89_03785 LI89_03785 851352 853949 + bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate gene gene740 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03785 LI89_03790 LI89_03790 LI89_03790 854115 854477 + hypothetical protein gene gene741 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03790 LI89_03795 LI89_03795 LI89_03795 854470 855351 - aromatic amino acid exporter gene gene742 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03795 LI89_03805 LI89_03805 LI89_03805 861332 861832 + hypothetical protein gene gene743 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03805 LI89_03815 LI89_03815 LI89_03815 862179 862502 + cytoplasmic protein gene gene744 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03815 LI89_03820 LI89_03820 LI89_03820 862545 862883 + XRE family transcriptional regulator gene gene745 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03820 LI89_03825 LI89_03825 LI89_03825 862992 863786 - S-adenosylmethionine decarboxylase S-adenosylmethionine provides the aminopropyl moiety required for spermidine biosynthesis from putrescine gene gene746 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03825 LI89_03830 LI89_03830 LI89_03830 863811 864674 - spermidine synthase gene gene747 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03830 LI89_03835 LI89_03835 LI89_03835 864789 865136 - hypothetical protein gene gene748 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03835 LI89_03840 LI89_03840 LI89_03840 865367 866968 + multicopper oxidase laccase%3B copper-stimulated phenoloxidase and ferroxidase which may be involved in copper detoxification gene gene749 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03840 LI89_03845 LI89_03845 LI89_03845 867007 867627 - hypothetical protein gene gene750 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03845 LI89_03850 LI89_03850 LI89_03850 867872 868408 + hypoxanthine phosphoribosyltransferase catalyzes the formation of inosine monophosphate from hypoxanthine and 5-phospho-alpha-D-ribose 1-diphosphate gene gene751 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03850 LI89_03855 LI89_03855 LI89_03855 868497 869159 - carbonic anhydrase catalyzes the interconversion of bicarbonate and carbon dioxide gene gene752 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03855 LI89_03860 LI89_03860 LI89_03860 869393 870319 + ABC transporter gene gene753 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03860 LI89_03865 LI89_03865 LI89_03865 870316 871086 + ABC transporter permease gene gene754 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03865 LI89_03870 LI89_03870 LI89_03870 871461 872768 + hypothetical protein gene gene755 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03870 LI89_03875 LI89_03875 LI89_03875 873039 873419 - aspartate decarboxylase gene gene756 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03875 LI89_03880 LI89_03880 panC panC 873577 874431 - pantoate--beta-alanine ligase catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine gene gene757 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03880 LI89_03885 LI89_03885 panB panB 874464 875261 - 3-methyl-2-oxobutanoate hydroxymethyltransferase catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5%2C10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate gene gene758 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03885 LI89_03890 LI89_03890 LI89_03890 875336 875815 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase gene gene759 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03890 LI89_03895 LI89_03895 pcnB pcnB 875824 877275 - poly(A) polymerase I Polymerase that creates the 3' poly(A) tail found in some mRNA's gene gene760 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03895 LI89_03900 LI89_03900 LI89_03900 877458 878387 - glutamyl-Q tRNA(Asp) ligase gene gene761 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03900 LI89_03905 LI89_03905 dksA dksA 878529 878984 - RNA polymerase-binding transcription factor gene gene762 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03905 LI89_03910 LI89_03910 LI89_03910 879164 879907 - transcriptional regulator gene gene763 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03910 LI89_03915 LI89_03915 LI89_03915 879919 880476 - 2'-5' RNA ligase gene gene764 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03915 LI89_03920 LI89_03920 LI89_03920 880520 883039 + ATP-dependent helicase HrpB similar in sequence to the ATP-dependent RNA helicase HrpA gene gene765 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03920 LI89_03925 LI89_03925 mrcB mrcB 883147 885633 + bifunctional glycosyl transferase/transpeptidase penicillin-binding protein 1b%3B contains transglycosylase and transpeptidase activity%3B major enzyme for peptidoglycan biosynthesis in Escherichia coli%3B transmembrane protein%3B forms dimers%3B three variants%2C one of which may be a degradation product%2C while the other appears to result from an alternative initiation site%2C are found within the cell gene gene766 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03925 LI89_03930 LI89_03930 LI89_03930 885887 886684 + iron-hydroxamate transporter ATP-binding subunit part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter gene gene767 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03930 LI89_03935 LI89_03935 LI89_03935 886684 887613 + iron-hydroxamate transporter substrate-binding subunit gene gene768 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03935 LI89_03940 LI89_03940 LI89_03940 887613 889607 + iron ABC transporter gene gene769 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03940 LI89_03945 LI89_03945 LI89_03945 889662 890942 - glutamate-1-semialdehyde aminotransferase Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway gene gene770 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03945 LI89_03950 LI89_03950 LI89_03950 891209 892642 + H(+)/Cl(-) exchange transporter ClcA gene gene771 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03950 LI89_03955 LI89_03955 LI89_03955 892760 893104 + iron-sulfur cluster insertion protein ErpA essential respiratory protein A%3B may be involved in the transfer of iron-sulfur clusters%3B essential for growth using oxygen or alternate electron acceptors gene gene772 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03955 LI89_03960 LI89_03960 LI89_03960 893718 894332 - hypothetical protein gene gene773 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03960 LI89_03965 LI89_03965 LI89_03965 894332 895195 - Vitamin B12-binding protein gene gene774 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03965 LI89_03970 LI89_03970 LI89_03970 895195 895896 - 5'-methylthioadenosine nucleosidase enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine gene gene775 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03970 LI89_03975 LI89_03975 LI89_03975 896105 897622 + deoxyguanosinetriphosphate triphosphohydrolase gene gene776 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03975 LI89_03980 LI89_03980 LI89_03980 897932 899368 + serine endoprotease protease Do%3B required at high temperature%3B degrades damaged proteins gene gene777 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03980 LI89_03985 LI89_03985 LI89_03985 899481 902330 - histidine kinase part of the two-component regulatory system with UvrY%3B involved in the regulation of carbon metabolism via the csrA/csrB regulatory system gene gene778 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03985 LI89_03990 LI89_03990 rumA rumA 902387 903718 + 23S rRNA methyltransferase in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA%3B binds an iron-sulfur cluster [4Fe-4S] gene gene779 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03990 LI89_03995 LI89_03995 relA relA 903728 905962 + (p)ppGpp synthetase (p)ppGpp synthetase%3B catalyzes the formation of pppGpp and ppGpp from ATP and GTP or GDP gene gene780 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_03995 LI89_04000 LI89_04000 mazG mazG 906117 906959 + nucleoside triphosphate hydrolase functions in degradation of stringent response intracellular messenger ppGpp%3B in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF%3B activity of MazG is inhibited by MazEF in vitro%3B ppGpp inhibits mazEF expression%3B MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation%3B MazG also interacts with the GTPase protein Era gene gene781 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04000 LI89_04005 LI89_04005 pyrG pyrG 907171 908808 + CTP synthetase CTP synthase%3B cytidine triphosphate synthetase%3B catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen%3B in Escherichia coli this enzyme forms a homotetramer gene gene782 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04005 LI89_04010 LI89_04010 eno eno 908888 910183 + enolase catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis gene gene783 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04010 LI89_04015 LI89_04015 LI89_04015 910528 911718 + pyridine nucleotide-disulfide oxidoreductase gene gene784 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04015 LI89_04020 LI89_04020 LI89_04020 911773 912135 + hypothetical protein gene gene785 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04020 LI89_04025 LI89_04025 LI89_04025 912168 913370 + methionine gamma-lyase catalyzes the formation of methanethiol and 2-ocobutanoate from L-methionine gene gene786 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04025 LI89_04035 LI89_04035 LI89_04035 914832 915356 + superoxide dismutase gene gene787 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04035 LI89_04040 LI89_04040 LI89_04040 915460 916131 + pyrroloquinoline quinone biosynthesis protein gene gene788 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04040 LI89_04045 LI89_04045 LI89_04045 916184 916543 - 6-carboxy-5%2C6%2C7%2C8-tetrahydropterin synthase gene gene789 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04045 LI89_04050 LI89_04050 cysJ cysJ 916910 918715 + sulfite reductase subunit alpha catalyzes the reduction of sulfite to sulfide in the biosynthesis of L-cysteine from sulfate%3B a flavoprotein with flavin reductase activity gene gene790 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04050 LI89_04055 LI89_04055 LI89_04055 918715 920445 + sulfite reductase subunit beta hemoprotein%3B NADPH dependent%3B with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide gene gene791 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04055 LI89_04060 LI89_04060 LI89_04060 920442 921176 + phosphoadenosine phosphosulfate reductase catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite gene gene792 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04060 LI89_04065 LI89_04065 LI89_04065 921412 921819 - hypothetical protein gene gene793 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04065 LI89_04070 LI89_04070 LI89_04070 921947 922147 - hypothetical protein gene gene794 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04070 LI89_04075 LI89_04075 LI89_04075 922334 923368 - alkaline phosphatase catalyzes the sequential removal of 2 amino-terminal arginines from alkaline phosphatase isozyme 1 to form isozymes 2 and 3 gene gene795 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04075 LI89_04080 LI89_04080 LI89_04080 923661 925079 + sirohydrochlorin ferrochelatase gene gene796 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04080 LI89_04085 LI89_04085 LI89_04085 925090 925998 + sulfate adenylyltransferase subunit 2 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP gene gene797 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04085 LI89_04090 LI89_04090 cysN cysN 926072 927508 + sulfate adenylyltransferase subunit 1 may be GTPase that regulates ATP sulfurylase activity that is involved in converting ATP and sulfate to diphosphate and adenylylsulfate%3B in Escherichia coli this enzyme functions in cysteine biosynthesis in the first step%3B forms a heterodimer with CysD%3B part of the GTP-binding elongation factor family CysN/NodQ gene gene798 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04090 LI89_04095 LI89_04095 LI89_04095 927510 928160 + adenylylsulfate kinase converts ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate%3B in Escherichia coli this enzyme functions in cysteine biosynthesis gene gene799 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04095 LI89_04100 LI89_04100 LI89_04100 928258 928575 + membrane protein gene gene800 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04100 LI89_04105 LI89_04105 LI89_04105 928647 929381 - amino acid ABC transporter ATPase gene gene801 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04105 LI89_04110 LI89_04110 LI89_04110 929365 930132 - amino acid ABC transporter permease gene gene802 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04110 LI89_04115 LI89_04115 LI89_04115 930206 930979 - ABC transporter substrate-binding protein gene gene803 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04115 LI89_04120 LI89_04120 LI89_04120 931404 931727 + cell division protein FtsB gene gene804 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04120 LI89_04125 LI89_04125 LI89_04125 931731 932504 + 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase gene gene805 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04125 LI89_04130 LI89_04130 ispF ispF 932519 933007 + 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate gene gene806 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04130 LI89_04135 LI89_04135 truD truD 933018 934067 + tRNA pseudouridine synthase D catalyzes the modification of U13 in tRNA(Glu) gene gene807 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04135 LI89_04140 LI89_04140 surE surE 934045 934797 + stationary phase survival protein SurE broad specificity 5'(3')-nucleotidase and polyphosphatase gene gene808 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04140 LI89_04145 LI89_04145 pcm pcm 934819 935445 + protein-L-isoaspartate O-methyltransferase catalyzes the methyl esterification of L-isoaspartyl residues that are formed in damaged proteins gene gene809 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04145 LI89_04150 LI89_04150 LI89_04150 935638 936603 + peptidase gene gene810 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04150 LI89_04155 LI89_04155 LI89_04155 936658 937656 + RNA polymerase sigma factor RpoS sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this sigma factor controls a regulon of genes required for protection against external stresses gene gene811 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04155 LI89_04160 LI89_04160 LI89_04160 937745 940300 - DNA mismatch repair protein MutS This protein performs the mismatch recognition step during the DNA repair process gene gene812 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04160 LI89_04165 LI89_04165 LI89_04165 940459 942123 - membrane protein gene gene813 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04165 LI89_04170 LI89_04170 LI89_04170 942228 942491 - faeA-like family protein gene gene814 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04170 LI89_04175 LI89_04175 LI89_04175 943423 943947 + fimbria A protein gene gene815 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04175 LI89_04180 LI89_04180 LI89_04180 944114 944578 + pilin gene gene816 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04180 LI89_04185 LI89_04185 LI89_04185 944605 947145 + fimbrial assembly protein gene gene817 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04185 LI89_04190 LI89_04190 LI89_04190 947409 948155 + molecular chaperone gene gene818 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04190 LI89_04195 LI89_04195 LI89_04195 948230 948745 + exotoxin gene gene819 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04195 LI89_04200 LI89_04200 LI89_04200 948745 949239 + pilus assembly protein gene gene820 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04200 LI89_04205 LI89_04205 LI89_04205 949249 949794 + exotoxin gene gene821 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04205 LI89_04210 LI89_04210 LI89_04210 949887 950714 + exotoxin gene gene822 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04210 LI89_04215 LI89_04215 LI89_04215 951035 951223 + hypothetical protein gene gene823 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04215 LI89_04220 LI89_04220 LI89_04220 951496 952122 + thiol:disulfide interchange protein gene gene824 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04220 LI89_04225 LI89_04225 LI89_04225 952122 953078 + ABC transporter gene gene825 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04225 LI89_04230 LI89_04230 LI89_04230 953104 955254 + ABC transporter ATP-binding protein gene gene826 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04230 LI89_04235 LI89_04235 LI89_04235 955254 956429 + macrolide transporter gene gene827 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04235 LI89_04240 LI89_04240 LI89_04240 956419 958395 + macrolide transporter with MacA is involved in the export of macrolide gene gene828 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04240 LI89_04245 LI89_04245 LI89_04245 958392 959798 + RND transporter gene gene829 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04245 LI89_04250 LI89_04250 LI89_04250 959795 961045 + 3-oxoacyl-ACP synthase gene gene830 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04250 LI89_04255 LI89_04255 LI89_04255 961048 961863 + hypothetical protein gene gene831 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04255 LI89_04260 LI89_04260 LI89_04260 961877 962125 + acyl carrier protein gene gene832 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04260 LI89_04265 LI89_04265 LI89_04265 962130 962864 + 3-oxoacyl-ACP reductase gene gene833 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04265 LI89_04270 LI89_04270 LI89_04270 962954 965296 - autotransporter gene gene834 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04270 LI89_04285 LI89_04285 LI89_04285 966021 966962 - transcriptional regulator regulates the synthesis and expression of the dsdXA operon and dadA gene gene gene835 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04285 LI89_04295 LI89_04295 LI89_04295 967192 968529 + DsdX permease gene gene836 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04295 LI89_04300 LI89_04300 LI89_04300 968547 969878 + D-serine dehydratase catalyzes the formation of pyruvate from serine gene gene837 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04300 LI89_04305 LI89_04305 LI89_04305 970144 971001 + ABC transporter substrate-binding protein gene gene838 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04305 LI89_04310 LI89_04310 LI89_04310 971010 971672 + ABC transporter permease gene gene839 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04310 LI89_04315 LI89_04315 LI89_04315 971669 972307 + ABC transporter permease gene gene840 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04315 LI89_04320 LI89_04320 LI89_04320 972309 973124 + ATP-binding protein gene gene841 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04320 LI89_04325 LI89_04325 LI89_04325 973117 974400 + peptidase M20 gene gene842 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04325 LI89_04330 LI89_04330 LI89_04330 974369 975067 + aminomethyltransferase gene gene843 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04330 LI89_04335 LI89_04335 LI89_04335 975153 975743 + XRE family transcriptional regulator gene gene844 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04335 LI89_04345 LI89_04345 fusA fusA 977290 979398 - elongation factor G EF-G%3B promotes GTP-dependent translocation of the ribosome during translation%3B many organisms have multiple copies of this gene gene gene845 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04345 LI89_04350 LI89_04350 LI89_04350 979743 980090 + ArsR family transcriptional regulator gene gene846 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04350 LI89_04355 LI89_04355 LI89_04355 980131 981381 - L-sorbose 1-phosphate reductase gene gene847 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04355 LI89_04360 LI89_04360 LI89_04360 981469 982299 - PTS mannose transporter subunit IID gene gene848 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04360 LI89_04365 LI89_04365 LI89_04365 982311 983108 - PTS mannose transporter subunit IIC catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B the IIC domain forms the PTS system translocation channel and contains the specific substrate-binding site gene gene849 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04365 LI89_04370 LI89_04370 LI89_04370 983250 983741 - PTS friuctose transporter subunit IIB gene gene850 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04370 LI89_04375 LI89_04375 LI89_04375 983738 984160 - PTS sorbose transporter subunit IIA gene gene851 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04375 LI89_04380 LI89_04380 LI89_04380 984270 985229 - Cro/Cl family transcriptional regulator gene gene852 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04380 LI89_04385 LI89_04385 LI89_04385 985598 987331 - amidohydrolase gene gene853 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04385 LI89_04390 LI89_04390 LI89_04390 987387 988025 - response regulator receiver protein gene gene854 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04390 LI89_04395 LI89_04395 LI89_04395 988015 989181 - amino acid ABC transporter substrate-binding protein gene gene855 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04395 LI89_04400 LI89_04400 LI89_04400 989256 990245 - acetamidase gene gene856 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04400 LI89_04405 LI89_04405 LI89_04405 990277 990996 - ABC transporter gene gene857 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04405 LI89_04410 LI89_04410 LI89_04410 990993 991727 - branched-chain amino acid ABC transporter ATP-binding protein gene gene858 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04410 LI89_04415 LI89_04415 LI89_04415 991724 992770 - ABC transporter permease gene gene859 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04415 LI89_04420 LI89_04420 LI89_04420 992780 993649 - ABC transporter permease gene gene860 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04420 LI89_04425 LI89_04425 LI89_04425 993876 995114 - urea ABC transporter substrate-binding protein gene gene861 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04425 LI89_04430 LI89_04430 LI89_04430 995592 997235 - fumarate hydratase catalyzes the formation of malate from fumerate gene gene862 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04430 LI89_04435 LI89_04435 LI89_04435 997522 999012 - 3-keto-L-gulonate kinase gene gene863 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04435 LI89_04440 LI89_04440 LI89_04440 999022 999903 - xylulose 5-phosphate 3-epimerase L-xylulose 5-phosphate 3-epimerase activity not yet demonstrated%3B may be involved in the utilization of 2%2C3-diketo-L-gulonate gene gene864 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04440 LI89_04445 LI89_04445 LI89_04445 999903 1000949 - sugar ABC transporter permease gene gene865 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04445 LI89_04450 LI89_04450 LI89_04450 1000961 1001950 - sugar ABC transporter permease gene gene866 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04450 LI89_04455 LI89_04455 LI89_04455 1001943 1003457 - lipase gene gene867 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04455 LI89_04460 LI89_04460 LI89_04460 1003551 1004555 - LacI family transcriptional regulator gene gene868 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04460 LI89_04465 LI89_04465 LI89_04465 1004689 1005498 - DeoR faimly transcriptional regulator gene gene869 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04465 LI89_04470 LI89_04470 araD araD 1006049 1006744 + ribulose 5-phosphate epimerase catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate%3B links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source gene gene870 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04470 LI89_04475 LI89_04475 LI89_04475 1006785 1007495 - transcriptional regulator regulates expression of genes involved in L-fucose utilization gene gene871 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04475 LI89_04480 LI89_04480 LI89_04480 1007589 1008029 - fucose isomerase gene gene872 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04480 LI89_04485 LI89_04485 LI89_04485 1008022 1009518 - L-fuculose kinase gene gene873 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04485 LI89_04490 LI89_04490 fucI fucI 1009619 1011397 - sugar isomerase catalyzes the conversion of the aldose L-fucose into the corresponding ketose L-fuculose gene gene874 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04490 LI89_04495 LI89_04495 LI89_04495 1011449 1012768 - L-fucose transporter gene gene875 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04495 LI89_04500 LI89_04500 LI89_04500 1013347 1013994 + fuculose phosphate aldolase catalyzes the formation of glycerone phosphate and (S)-lactaldehyde from L-fuculose 1-phosphate gene gene876 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04500 LI89_04505 LI89_04505 LI89_04505 1014039 1015190 + 1%2C2-propanediol oxidoreductase gene gene877 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04505 LI89_04510 LI89_04510 LI89_04510 1015470 1017914 + dimethyl sulfoxide reductase gene gene878 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04510 LI89_04515 LI89_04515 LI89_04515 1017923 1018540 + dimethyl sulfoxide reductase oxidoreductase%2C Fe-S subunit%3B terminal electron transfer protein for the reduction of DMSO gene gene879 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04515 LI89_04520 LI89_04520 LI89_04520 1018542 1019393 + dimethyl sulfoxide reductase gene gene880 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04520 LI89_04525 LI89_04525 LI89_04525 1019390 1019995 + twin-argninine leader-binding protein DmsD binds to the twin-arginine signal peptides of certain proteins%2C including dimethylsulfoxide reductase and trimethylamine N-oxide reductase that are translocated to the cytoplasmic membrane gene gene881 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04525 LI89_04530 LI89_04530 LI89_04530 1020012 1020350 - XRE family transcriptional regulator gene gene882 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04530 LI89_04535 LI89_04535 LI89_04535 1020340 1020687 - hypothetical protein gene gene883 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04535 LI89_04540 LI89_04540 LI89_04540 1020930 1021871 + sugar ABC transporter substrate-binding protein gene gene884 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04540 LI89_04545 LI89_04545 LI89_04545 1021950 1022564 + hypothetical protein gene gene885 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04545 LI89_04550 LI89_04550 LI89_04550 1022564 1024087 + sugar ABC transporter ATP-binding protein gene gene886 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04550 LI89_04555 LI89_04555 LI89_04555 1024087 1025202 + sugar ABC transporter permease gene gene887 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04555 LI89_04560 LI89_04560 LI89_04560 1025410 1026240 + transketolase gene gene888 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04560 LI89_04565 LI89_04565 LI89_04565 1026233 1027177 + transketolase gene gene889 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04565 LI89_04570 LI89_04570 LI89_04570 1027180 1028667 + glycerol kinase gene gene890 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04570 LI89_04575 LI89_04575 LI89_04575 1028688 1030109 + fucose isomerase gene gene891 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04575 LI89_04580 LI89_04580 LI89_04580 1030222 1031166 - DeoR faimly transcriptional regulator gene gene892 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04580 LI89_04585 LI89_04585 LI89_04585 1031324 1032652 - MFS transporter gene gene893 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04585 LI89_04590 LI89_04590 LI89_04590 1032887 1033375 + hypothetical protein gene gene894 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04590 LI89_04595 LI89_04595 recA recA 1033488 1034552 + recombinase A catalyzes the hydrolysis of ATP in the presence of single-stranded DNA%2C the ATP-dependent uptake of single-stranded DNA by duplex DNA%2C and the ATP-dependent hybridization of homologous single-stranded DNAs gene gene895 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04595 LI89_04600 LI89_04600 LI89_04600 1034857 1035360 + recombinase RecX gene gene896 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04600 LI89_04605 LI89_04605 LI89_04605 1035502 1038129 + alanyl-tRNA synthetase gene gene897 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04605 LI89_04610 LI89_04610 LI89_04610 1038383 1038568 + carbon storage regulator affects carbohydrate metabolism%3B has regulatory role in many processes gene gene898 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04610 LI89_04615 LI89_04615 LI89_04615 1038932 1039024 + tRNA-Ser tRNA gene899 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04615 LI89_04620 LI89_04620 LI89_04620 1039033 1039109 + tRNA-Arg tRNA gene900 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04620 LI89_04625 LI89_04625 LI89_04625 1039168 1039244 + tRNA-Arg tRNA gene901 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04625 LI89_04630 LI89_04630 LI89_04630 1039318 1039394 + tRNA-Arg tRNA gene902 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04630 LI89_04635 LI89_04635 LI89_04635 1039962 1040528 + 6-phosphogluconate phosphatase YqaB%3B catalyzes the dephosphorylation of fructose 1-phosphate%2C 6-phosphogluconate and p-nitrophenyl phosphate (pNPP)%3B presents beta-phosphoglucomutase activity at a lower extent gene gene903 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04635 LI89_04640 LI89_04640 LI89_04640 1040525 1040953 + membrane protein gene gene904 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04640 LI89_04645 LI89_04645 LI89_04645 1041036 1042595 + glutamate--cysteine ligase involved in the first step of glutathione biosynthesis gene gene905 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04645 LI89_04650 LI89_04650 LI89_04650 1042762 1043277 + S-ribosylhomocysteinase catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2 gene gene906 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04650 LI89_04655 LI89_04655 LI89_04655 1043364 1044644 - hypothetical protein gene gene907 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04655 LI89_04660 LI89_04660 LI89_04660 1044714 1045505 - membrane protein gene gene908 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04660 LI89_04665 LI89_04665 LI89_04665 1045671 1047032 + signal recognition particle gene gene909 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04665 LI89_04670 LI89_04670 rpsP rpsP 1047260 1047508 + 30S ribosomal protein S16 binds to lower part of 30S body where it stabilizes two domains%3B required for efficient assembly of 30S%3B in Escherichia coli this protein has nuclease activity gene gene910 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04670 LI89_04675 LI89_04675 rimM rimM 1047530 1048078 + 16S rRNA-processing protein RimM Essential for efficient processing of 16S rRNA gene gene911 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04675 LI89_04680 LI89_04680 trmD trmD 1048117 1048857 + tRNA (guanine-N1)-methyltransferase methylates guanosine-37 in various tRNAs%3B uses S-adenosyl-L-methionine to transfer methyl group to tRNA gene gene912 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04680 LI89_04685 LI89_04685 LI89_04685 1048938 1049294 + 50S ribosomal protein L19 gene gene913 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04685 LI89_04690 LI89_04690 LI89_04690 1049503 1050270 - membrane protein gene gene914 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04690 LI89_04695 LI89_04695 LI89_04695 1050507 1051850 - C4-dicarboxylate transporter functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate%3B similar to DcuA%3B DcuA and DcuB function as independent and mutually redundant C4-dicarboxylate (aspartate%2C malate%2C fumarate and succinate) transporters gene gene915 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04695 LI89_04700 LI89_04700 LI89_04700 1052196 1052912 - response regulator gene gene916 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04700 LI89_04705 LI89_04705 LI89_04705 1053147 1054226 + phospho-2-dehydro-3-deoxyheptonate aldolase catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate%2C tyrosine sensitive gene gene917 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04705 LI89_04710 LI89_04710 tyrA tyrA 1054229 1055350 + chorismate mutase catalyzes the formation of prephenate from chorismate and the formation of 4-hydroxyphenylpyruvate from prephenate in tyrosine biosynthesis gene gene918 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04710 LI89_04715 LI89_04715 pheA pheA 1055439 1056596 - chorismate mutase catalyzing the formation of prephenate from chorismate and the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis gene gene919 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04715 LI89_04720 LI89_04720 LI89_04720 1056921 1057283 - translation inhibitor protein RaiA associated with 30S ribosomal subunit%3B interferes with translation elongation gene gene920 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04720 LI89_04725 LI89_04725 LI89_04725 1057651 1058382 - membrane biogenesis protein gene gene921 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04725 LI89_04730 LI89_04730 rluD rluD 1058518 1059495 + 23S rRNA pseudouridylate synthase responsible for synthesis of pseudouridine from uracil at positions 1911%2C 1915 and 1917 in 23S ribosomal RNA gene gene922 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04730 LI89_04735 LI89_04735 LI89_04735 1059495 1060226 + hypothetical protein gene gene923 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04735 LI89_04740 LI89_04740 LI89_04740 1060357 1062930 + protein disaggregation chaperone gene gene924 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04740 LI89_04745 LI89_04745 LI89_04745 1063437 1064985 + 16S ribosomal RNA rRNA gene925 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04745 LI89_04750 LI89_04750 LI89_04750 1065085 1065161 + tRNA-Ile tRNA gene926 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04750 LI89_04755 LI89_04755 LI89_04755 1065272 1065347 + tRNA-Ala tRNA gene927 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04755 LI89_04765 LI89_04765 hypothetical protein hypothetical protein 1066787 1067316 + disrupted pseudogene gene928 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04765 LI89_04770 LI89_04770 LI89_04770 1069298 1070827 + 16S ribosomal RNA rRNA gene929 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04770 LI89_04775 LI89_04775 LI89_04775 1071279 1074211 + 23S ribosomal RNA rRNA gene930 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04775 LI89_04780 LI89_04780 LI89_04780 1075612 1075728 + 5S ribosomal RNA rRNA gene931 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04780 LI89_04785 LI89_04785 LI89_04785 1075944 1076285 - lipoprotein required for high salt suppression of motility gene gene932 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04785 LI89_04790 LI89_04790 pssA pssA 1076348 1077703 - phosphatidylserine synthase catalyzes de novo synthesis of phosphatidylserine from CDP-diacylglycerol and L-serine which leads eventually to the production of phosphatidylethanolamine%3B bounds to the ribosome gene gene933 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04790 LI89_04795 LI89_04795 LI89_04795 1077881 1080523 - protein acetyltransferase catalyzes the acetylation of lysine gene gene934 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04795 LI89_04800 LI89_04800 LI89_04800 1080576 1081325 - DTW domain-containing protein YfiP gene gene935 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04800 LI89_04805 LI89_04805 LI89_04805 1081496 1081936 - thioredoxin gene gene936 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04805 LI89_04810 LI89_04810 LI89_04810 1082157 1083248 + methyltransferase gene gene937 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04810 LI89_04815 LI89_04815 emrB emrB 1083456 1084988 - multidrug resistance protein B multidrug MFS transporte%3B with EmrA is involved in resistance to hydrophobic antibiotics such as nalidixic acid gene gene938 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04815 LI89_04820 LI89_04820 LI89_04820 1085028 1086200 - multidrug transporter with ErmA and TolC forms a multidrug efflux system gene gene939 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04820 LI89_04825 LI89_04825 LI89_04825 1086215 1087681 - transporter gene gene940 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04825 LI89_04830 LI89_04830 LI89_04830 1087729 1088241 - transcriptional repressor MprA DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux%3B negative regulator of the multidrug operon emrAB gene gene941 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04830 LI89_04835 LI89_04835 LI89_04835 1088413 1088754 - L-valine exporter gene gene942 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04835 LI89_04840 LI89_04840 LI89_04840 1088751 1089524 - membrane protein gene gene943 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04840 LI89_04845 LI89_04845 LI89_04845 1089855 1091057 - transporter gene gene944 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04845 LI89_04850 LI89_04850 LI89_04850 1091824 1092210 - hypothetical protein gene gene945 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04850 LI89_04855 LI89_04855 LI89_04855 1092238 1093635 - amidase catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia gene gene946 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04855 LI89_04860 LI89_04860 LI89_04860 1093632 1093832 - hypothetical protein gene gene947 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04860 LI89_04865 LI89_04865 LI89_04865 1093871 1095457 - gamma-glutamyltransferase gene gene948 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04865 LI89_04870 LI89_04870 LI89_04870 1095646 1096485 + RpiR family transcriptional regulator gene gene949 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04870 LI89_04875 LI89_04875 LI89_04875 1096806 1097597 + amino acid ABC transporter substrate-binding protein gene gene950 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04875 LI89_04880 LI89_04880 LI89_04880 1097610 1098293 + polar amino acid ABC transporter permease gene gene951 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04880 LI89_04885 LI89_04885 LI89_04885 1098290 1098943 + amino acid ABC transporter permease gene gene952 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04885 LI89_04890 LI89_04890 LI89_04890 1098924 1099658 + amino acid ABC transporter ATP-binding protein gene gene953 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04890 LI89_04895 LI89_04895 LI89_04895 1099698 1100948 + aminotransferase V gene gene954 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04895 LI89_04900 LI89_04900 LI89_04900 1100948 1102225 + allantoate amidohydrolase gene gene955 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04900 LI89_04905 LI89_04905 LI89_04905 1102273 1103043 - carbon-nitrogen hydrolase NAD(P)-binding gene gene956 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04905 LI89_04910 LI89_04910 LI89_04910 1103031 1104191 - methionine aminotransferase catalyzes the transfer of an amino moiety%3B preference for methionine followed by histidine and phenylalanine gene gene957 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04910 LI89_04915 LI89_04915 LI89_04915 1104408 1105040 + methylthioribulose-1-phosphate dehydratase catalyzes the formation of diketo methylthiopentyl phosphate from methylribulose phosphate in the methionine salvage pathway gene gene958 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04915 LI89_04920 LI89_04920 LI89_04920 1105037 1105726 + haloacid dehalogenase gene gene959 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04920 LI89_04925 LI89_04925 LI89_04925 1105723 1106265 + acireductone dioxygenase gene gene960 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04925 LI89_04930 LI89_04930 LI89_04930 1106355 1107395 - methylthioribose-1-phosphate isomerase gene gene961 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04930 LI89_04935 LI89_04935 LI89_04935 1107589 1108788 + methylthioribose kinase gene gene962 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04935 LI89_04940 LI89_04940 LI89_04940 1109401 1111194 + hemolysin secretion protein ShlB gene gene963 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04940 LI89_04945 LI89_04945 LI89_04945 1112750 1117888 + adhesin gene gene964 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04945 LI89_04950 LI89_04950 LI89_04950 1117955 1119805 + glycosyltransferase gene gene965 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04950 LI89_04955 LI89_04955 fadE fadE 1119856 1122303 - acyl-CoA dehydrogenase functions in fatty acid oxidation%3B converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA gene gene966 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04955 LI89_04960 LI89_04960 gmhA gmhA 1122559 1123140 + phosphoheptose isomerase catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate gene gene967 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04960 LI89_04965 LI89_04965 LI89_04965 1123242 1124006 + glutamine amidotransferase gene gene968 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04965 LI89_04970 LI89_04970 LI89_04970 1123980 1124753 - transpeptidase gene gene969 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04970 LI89_04975 LI89_04975 LI89_04975 1125227 1126570 + Na(+)-translocating NADH-quinone reductase subunit A uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm gene gene970 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04975 LI89_04980 LI89_04980 LI89_04980 1126574 1127815 + Na(+)-translocating NADH-quinone reductase subunit B uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm gene gene971 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04980 LI89_04985 LI89_04985 LI89_04985 1127805 1128605 + Na(+)-translocating NADH-quinone reductase subunit C uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm gene gene972 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04985 LI89_04990 LI89_04990 LI89_04990 1128598 1129227 + Na(+)-translocating NADH-quinone reductase subunit D Part of the NQR complex which catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions%2C coupled with the transport of Na(+) ions from the cytoplasm to the periplasm gene gene973 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04990 LI89_04995 LI89_04995 LI89_04995 1129234 1129830 + Na(+)-translocating NADH-quinone reductase subunit E Part of the NQR complex which consists of NqrA%2C NqrB%2C NqrC%2C NqrD%2C NqrE and NqrF%3B NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions%2C coupled with the transport of Na(+) ions from the cytoplasm to the periplasm%3B NqrE is probably involved in the second step%2C the conversion of ubisemiquinone to ubiquinol. gene gene974 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_04995 LI89_05000 LI89_05000 LI89_05000 1129846 1131069 + Na(+)-translocating NADH-quinone reductase subunit F uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm gene gene975 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05000 LI89_05005 LI89_05005 LI89_05005 1131124 1132131 + thiamine biosynthesis lipoprotein gene gene976 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05005 LI89_05010 LI89_05010 LI89_05010 1132144 1132371 + hypothetical protein gene gene977 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05010 LI89_05015 LI89_05015 LI89_05015 1132510 1133460 - glycerophosphodiester phosphodiesterase gene gene978 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05015 LI89_05020 LI89_05020 LI89_05020 1133870 1134970 + D-alanine--D-alanine ligase gene gene979 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05020 LI89_05025 LI89_05025 LI89_05025 1135085 1135717 + DNA-binding protein gene gene980 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05025 LI89_05030 LI89_05030 LI89_05030 1135720 1136688 + serine dehydratase catalyzes the formation of 2-oxobutanoate from L-threonine or the formation of pyruvate from serine gene gene981 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05030 LI89_05035 LI89_05035 LI89_05035 1136688 1137080 + endoribonuclease L-PSP gene gene982 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05035 LI89_05040 LI89_05040 LI89_05040 1137183 1138241 + DNA polymerase IV involved in translesion DNA polymerization with beta clamp of polymerase III%3B belongs to Y family of polymerases%3B does not contain proofreading function gene gene983 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05040 LI89_05045 LI89_05045 LI89_05045 1138314 1139789 - aminoacyl-histidine dipeptidase catalyzes the hydrolysis of Xaa-His dipeptides gene gene984 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05045 LI89_05050 LI89_05050 LI89_05050 1140097 1140555 + xanthine-guanine phosphoribosyltransferase catalyzes the conversion of guanine%2C xanthine and%2C to a lesser extent%2C hypoxanthine to GMP%2C XMP and IMP%2C respectively gene gene985 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05050 LI89_05055 LI89_05055 frsA frsA 1140681 1141928 + fermentation/respiration switch protein forms a 1:1 complex with the unphosphorylated from of enzyme IIAGlc%3B FrsA may promote fermentation gene gene986 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05055 LI89_05060 LI89_05060 LI89_05060 1141988 1142389 + sigma factor-binding protein Crl gene gene987 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05060 LI89_05065 LI89_05065 LI89_05065 1142545 1143648 + gamma-glutamyl kinase gene gene988 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05065 LI89_05070 LI89_05070 LI89_05070 1143664 1144917 + gamma-glutamyl phosphate reductase gene gene989 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05070 LI89_05075 LI89_05075 LI89_05075 1144987 1145637 - GntR family transcriptional regulator gene gene990 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05075 LI89_05080 LI89_05080 LI89_05080 1145936 1147480 + PTS alpha-glucoside transporter subunit IIBC gene gene991 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05080 LI89_05085 LI89_05085 LI89_05085 1147492 1148814 + 6-phospho-alpha-glucosidase gene gene992 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05085 LI89_05090 LI89_05090 LI89_05090 1149018 1149767 + flagellar brake protein gene gene993 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05090 LI89_05095 LI89_05095 LI89_05095 1150142 1158781 + glycosyl transferase gene gene994 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05095 LI89_05100 LI89_05100 LI89_05100 1158910 1159164 + membrane protein gene gene995 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05100 LI89_05105 LI89_05105 LI89_05105 1159309 1159803 - GNAT family acetyltransferase gene gene996 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05105 LI89_05110 LI89_05110 LI89_05110 1159947 1160717 + SAM-dependent methyltransferase gene gene997 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05110 LI89_05115 LI89_05115 LI89_05115 1160921 1161190 + hypothetical protein gene gene998 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05115 LI89_05120 LI89_05120 LI89_05120 1161435 1161992 + methyltransferase gene gene999 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05120 LI89_05125 LI89_05125 LI89_05125 1162214 1163332 + periplasmic binding protein gene gene1000 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05125 LI89_05130 LI89_05130 LI89_05130 1163319 1165460 + TonB-dependent receptor gene gene1001 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05130 LI89_05135 LI89_05135 LI89_05135 1165687 1166211 + shikimate kinase gene gene1002 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05135 LI89_05140 LI89_05140 LI89_05140 1166692 1166979 + hypothetical protein gene gene1003 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05140 LI89_05145 LI89_05145 LI89_05145 1167051 1167962 - recombination associated protein Required for efficient pilin antigenic variation gene gene1004 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05145 LI89_05150 LI89_05150 LI89_05150 1168301 1169215 + fructokinase catalyzes phosphorylation of fructose%3B cytosolic enzyme gene gene1005 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05150 LI89_05155 LI89_05155 LI89_05155 1169333 1173022 - ATP-dependent dsDNA exonuclease gene gene1006 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05155 LI89_05160 LI89_05160 LI89_05160 1173019 1174257 - exonuclease SbcD with SbcC cleaves DNA hairpin structure%2C also has 5' single-strand endonuclease activity gene gene1007 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05160 LI89_05165 LI89_05165 LI89_05165 1174527 1175216 + transcriptional regulator PhoB two component response regulator for the phosphate regulon%3B PhoR phosphorylates PhoB gene gene1008 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05165 LI89_05170 LI89_05170 phoR phoR 1175241 1176557 + phosphate regulon sensor protein membrane-associated histidine protein kinase that phosphorylates phoB in response to environmental signals as part of the two-component phosphate regulatory system phoR/phoB gene gene1009 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05170 LI89_05175 LI89_05175 LI89_05175 1176579 1177556 + phosphate ABC transporter substrate-binding protein gene gene1010 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05175 LI89_05180 LI89_05180 LI89_05180 1177921 1179240 + branched-chain amino acid ABC transporter substrate-binding protein sodium:branched-chain amino acid symporter gene gene1011 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05180 LI89_05185 LI89_05185 proY proY 1179316 1180707 + proline-specific permease cryptic permease that may be involved in the transport of proline across the inner membrane%3B in Salmonella typhimurium%2C the proY gene is silent unless overexpressed on a multicopy plasmid or activated by a proZ mutation gene gene1012 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05185 LI89_05190 LI89_05190 LI89_05190 1180945 1182783 + maltodextrin glucosidase gene gene1013 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05190 LI89_05195 LI89_05195 LI89_05195 1182933 1183613 + short-chain dehydrogenase gene gene1014 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05195 LI89_05200 LI89_05200 LI89_05200 1183681 1185444 - gamma-glutamyltransferase gene gene1015 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05200 LI89_05205 LI89_05205 LI89_05205 1185845 1186447 - peroxiredoxin gene gene1016 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05205 LI89_05210 LI89_05210 LI89_05210 1186672 1187253 - ACP phosphodiesterase Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP gene gene1017 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05210 LI89_05215 LI89_05215 queA queA 1187396 1188484 + S-adenosylmethionine:tRNA ribosyltransferase-isomerase Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step gene gene1018 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05215 LI89_05220 LI89_05220 LI89_05220 1188590 1189279 - hydrolase gene gene1019 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05220 LI89_05225 LI89_05225 tgt tgt 1189593 1190720 + queuine tRNA-ribosyltransferase Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp%2C -Asn%2C -His and -Tyr) gene gene1020 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05225 LI89_05230 LI89_05230 yajC yajC 1190841 1191173 + preprotein translocase subunit YajC member of preprotein translocase%3B forms a heterotrimer with SecD and SecF%3B links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex gene gene1021 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05230 LI89_05235 LI89_05235 secD secD 1191201 1193048 + preprotein translocase subunit SecD part of the preprotein secretory system%3B when complexed with proteins SecF and YajC%2C SecDFyajC stimulates the proton motive force-driven protein translocation%2C and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane gene gene1022 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05235 LI89_05240 LI89_05240 LI89_05240 1193059 1194027 + preprotein translocase subunit SecF gene gene1023 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05240 LI89_05245 LI89_05245 LI89_05245 1195236 1196783 + MFS transporter permease gene gene1024 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05245 LI89_05250 LI89_05250 LI89_05250 1196885 1197334 + NrdR family transcriptional regulator gene gene1025 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05250 LI89_05255 LI89_05255 ribD ribD 1197399 1198508 + 5-amino-6-(5-phosphoribosylamino)uracil reductase riboflavin biosynthesis protein which catalyzes the deamination and reduction steps in the riboflavin biosynthesis pathway%3B catalyzes the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 2%2C5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 5-amino-6-(5-phosphoribitylamino)uracil gene gene1026 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05255 LI89_05260 LI89_05260 ribH ribH 1198643 1199113 + 6%2C7-dimethyl-8-ribityllumazine synthase RibE%3B 6%2C7-diimethyl-8-ribityllumazine synthase%3B DMRL synthase%3B lumazine synthase%3B beta subunit of riboflavin synthase%3B condenses 5-amino-6-(1'-D)-ribityl-amino-2%2C4(1H%2C3H)-pyrimidinedione with L-3%2C4-dihydrohy-2-butanone-4-phosphate to generate 6%2C6-dimethyl-8-lumazine (DMRL)%3B riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12)%3B involved in the last steps of riboflavin biosynthesis%3B forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli%3B in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not gene gene1027 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05260 LI89_05265 LI89_05265 nusB nusB 1199139 1199555 + transcription antiterminator NusB Regulates rRNA biosynthesis by transcriptional antitermination gene gene1028 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05265 LI89_05270 LI89_05270 LI89_05270 1199635 1200624 + thiamine monophosphate kinase gene gene1029 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05270 LI89_05275 LI89_05275 LI89_05275 1200617 1201114 + phosphatidylglycerophosphatase hydrolyzes phosphatidylglycerophosphate to produce phosphatidylglycerol and phosphate gene gene1030 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05275 LI89_05280 LI89_05280 LI89_05280 1201356 1203215 - 1-deoxy-D-xylulose-5-phosphate synthase catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate gene gene1031 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05280 LI89_05285 LI89_05285 LI89_05285 1203269 1204189 - geranyl transferase gene gene1032 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05285 LI89_05290 LI89_05290 LI89_05290 1204194 1204448 - exodeoxyribonuclease VII small subunit catalyzes the bidirectional exonucleolytic cleavage of DNA gene gene1033 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05290 LI89_05295 LI89_05295 LI89_05295 1204728 1206179 + tRNA s(4)U8 sulfurtransferase catalyzes the conversion of uridine to 4-thiouridinine tRNA%3B also required for the synthesis of the thiazole moiety gene gene1034 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05295 LI89_05300 LI89_05300 LI89_05300 1206526 1207116 - oxidative-stress-resistance chaperone gene gene1035 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05300 LI89_05305 LI89_05305 LI89_05305 1207079 1207990 - 2-dehydropantoate 2-reductase ketopantoate reductase%3B catalyzes the NADPH reduction of ketopantoate to pantoate%3B functions in pantothenate (vitamin B5) biosynthesis gene gene1036 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05305 LI89_05310 LI89_05310 LI89_05310 1208203 1208694 + nucleotide-binding protein nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ%3B the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription gene gene1037 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05310 LI89_05315 LI89_05315 LI89_05315 1208748 1210112 - membrane protein gene gene1038 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05315 LI89_05320 LI89_05320 LI89_05320 1210289 1211176 - protoheme IX farnesyltransferase converts protoheme IX and farnesyl diphosphate to heme O gene gene1039 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05320 LI89_05325 LI89_05325 LI89_05325 1211190 1211537 - cytochrome C oxidase gene gene1040 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05325 LI89_05330 LI89_05330 LI89_05330 1211537 1212151 - cytochrome o ubiquinol oxidase subunit III gene gene1041 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05330 LI89_05335 LI89_05335 LI89_05335 1212141 1214132 - cytochrome o ubiquinol oxidase subunit I gene gene1042 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05335 LI89_05340 LI89_05340 LI89_05340 1214137 1215093 - ubiquinol oxidase subunit II gene gene1043 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05340 LI89_05350 LI89_05350 LI89_05350 1215456 1216235 - hypothetical protein gene gene1044 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05350 LI89_05355 LI89_05355 ampG ampG 1216500 1217978 - muropeptide transporter in Escherichia coli this protein is a permease involved in peptidoglycan recycling%3B member of major facilitator superfamily%3B MFS%3B inner membrane protein gene gene1045 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05355 LI89_05360 LI89_05360 LI89_05360 1218056 1218634 - hypothetical protein gene gene1046 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05360 LI89_05365 LI89_05365 LI89_05365 1219002 1219334 + transcriptional regulator BolA positive transcriptional regulator of morphogenetic pathway%3B controlling several genes involved in oxidative stress%2C acid stress%2C heat shock%2C osmotic shock%2C and carbon-starvation stress gene gene1047 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05365 LI89_05370 LI89_05370 LI89_05370 1219750 1221054 + trigger factor gene gene1048 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05370 LI89_05375 LI89_05375 LI89_05375 1221531 1222154 + Clp protease ClpP gene gene1049 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05375 LI89_05380 LI89_05380 clpX clpX 1222376 1223647 + Clp protease ClpX binds and unfolds substrates as part of the ClpXP protease gene gene1050 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05380 LI89_05385 LI89_05385 LI89_05385 1223842 1226196 + DNA-binding protein gene gene1051 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05385 LI89_05390 LI89_05390 LI89_05390 1226414 1226686 + transcriptional regulator HU subunit alpha histone-like DNA-binding protein gene gene1052 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05390 LI89_05400 LI89_05400 LI89_05400 1226886 1228772 + molecular chaperone gene gene1053 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05400 LI89_05405 LI89_05405 LI89_05405 1228930 1229352 + transporter gene gene1054 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05405 LI89_05410 LI89_05410 LI89_05410 1229600 1230007 + thioesterase gene gene1055 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05410 LI89_05415 LI89_05415 LI89_05415 1230095 1230793 - queuosine biosynthesis protein QueC YbaX%3B catalyzes the transformation of GTP to 7-cyano-7-deazaguanine (preQ0)%2C as one of the early reactions of quenosine biosynthesis%3B quenosine is a modified nucleoside that occurs at the wobble position of GUN anticodons in tRNAs for Asn%2C Asp%2C Tyr%2C and His gene gene1056 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05415 LI89_05420 LI89_05420 LI89_05420 1230907 1232610 - peptide ABC transporter substrate-binding protein gene gene1057 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05420 LI89_05425 LI89_05425 LI89_05425 1232714 1233535 + thiamin pyrimidine pyrophosphate hydrolase HMP-PP phosphatase%3B catalyzes the hydrolysis of 4-amino-2-methyl-5-hydroxymethylpyrimidine pyrophosphate (HMP-PP) to 4-amino-2-methyl-5-hydroxymethylpyrimidine phosphate (HMP-P) gene gene1058 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05425 LI89_05430 LI89_05430 LI89_05430 1233661 1234701 - cysteine synthase gene gene1059 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05430 LI89_05435 LI89_05435 LI89_05435 1234828 1235289 + transcriptional regulator gene gene1060 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05435 LI89_05440 LI89_05440 LI89_05440 1235439 1237205 + multidrug ABC transporter ATP-binding protein gene gene1061 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05440 LI89_05445 LI89_05445 LI89_05445 1237198 1238976 + multidrug ABC transporter ATP-binding protein gene gene1062 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05445 LI89_05450 LI89_05450 LI89_05450 1239415 1239753 + nitrogen regulatory protein P-II 1 indirectly regulates nitrogen metabolism%3B at high nitrogen levels P-II prevents the phosphorylation of NR-I%2C the transcriptional activator of the glutamine synthetase gene (glnA)%3B at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA gene gene1063 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05450 LI89_05455 LI89_05455 LI89_05455 1239793 1241082 + ammonium transporter gene gene1064 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05455 LI89_05460 LI89_05460 LI89_05460 1241177 1242040 - acyl-CoA thioesterase gene gene1065 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05460 LI89_05470 LI89_05470 LI89_05470 1242298 1242828 + hypothetical protein gene gene1066 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05470 LI89_05475 LI89_05475 LI89_05475 1242880 1243185 - 6-O-methylguanine DNA methyltransferase gene gene1067 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05475 LI89_05480 LI89_05480 LI89_05480 1244028 1244231 - gene expression modulator with Hns involved in transcriptional regulation of hemolysin%3B non-specific DNA-binding protein which affects the production of multiple proteins gene gene1068 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05480 LI89_05485 LI89_05485 LI89_05485 1244278 1244646 - Biofilm formation regulator YbaJ gene gene1069 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05485 LI89_05490 LI89_05490 LI89_05490 1244804 1245157 - hypothetical protein gene gene1070 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05490 LI89_05495 LI89_05495 LI89_05495 1245751 1245930 + hypothetical protein gene gene1071 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05495 LI89_05500 LI89_05500 LI89_05500 1245927 1246655 + ABC transporter gene gene1072 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05500 LI89_05505 LI89_05505 LI89_05505 1246652 1247509 + iron ABC transporter gene gene1073 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05505 LI89_05510 LI89_05510 LI89_05510 1247558 1248436 + metal ABC transporter substrate-binding protein gene gene1074 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05510 LI89_05515 LI89_05515 rpmJ rpmJ 1248564 1248707 - 50S ribosomal protein L36 smallest protein in the large subunit%3B similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc%3B the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion%3B the proteins in this group do not have the motif gene gene1075 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05515 LI89_05520 LI89_05520 LI89_05520 1248723 1248983 - 50S ribosomal protein L31 gene gene1076 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05520 LI89_05525 LI89_05525 LI89_05525 1249133 1250416 - transporter gene gene1077 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05525 LI89_05530 LI89_05530 LI89_05530 1250526 1250891 - hypothetical protein gene gene1078 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05530 LI89_05535 LI89_05535 LI89_05535 1250947 1252212 - mutase gene gene1079 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05535 LI89_05540 LI89_05540 LI89_05540 1252209 1253384 - hypothetical protein gene gene1080 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05540 LI89_05545 LI89_05545 LI89_05545 1253450 1253812 - hypothetical protein gene gene1081 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05545 LI89_05550 LI89_05550 LI89_05550 1254053 1257205 - multidrug transporter gene gene1082 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05550 LI89_05555 LI89_05555 LI89_05555 1257222 1258409 - multidrug transporter with AcrD and TolC forms a transport system involved in resistance to a number of compounds including lipophilic antibiotics gene gene1083 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05555 LI89_05560 LI89_05560 LI89_05560 1258554 1259210 + transcriptional regulator regulates the acrAB operon which is involved in susceptibility to dephalothin and cephaloridine gene gene1084 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05560 LI89_05565 LI89_05565 LI89_05565 1259225 1259590 + hypothetical protein gene gene1085 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05565 LI89_05570 LI89_05570 LI89_05570 1259781 1263230 + hypothetical protein gene gene1086 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05570 LI89_05575 LI89_05575 LI89_05575 1263338 1263493 - hypothetical protein gene gene1087 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05575 LI89_05580 LI89_05580 LI89_05580 1263767 1264303 - prephenate dehydrogenase gene gene1088 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05580 LI89_05585 LI89_05585 LI89_05585 1264480 1264860 + hypothetical protein gene gene1089 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05585 LI89_05590 LI89_05590 LI89_05590 1265075 1265638 + adenine phosphoribosyltransferase catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis gene gene1090 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05590 LI89_05595 LI89_05595 LI89_05595 1265722 1267692 + DNA polymerase III subunits gamma and tau catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand%3B the tau chain serves as a scaffold to help in the dimerizaton of the alpha%2Cepsilon and theta core complex%3B the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA gene gene1091 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05595 LI89_05600 LI89_05600 LI89_05600 1267748 1268080 + hypothetical protein gene gene1092 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05600 LI89_05605 LI89_05605 recR recR 1268080 1268685 + recombination protein RecR involved in a recombinational process of DNA repair%2C independent of the recBC complex gene gene1093 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05605 LI89_05610 LI89_05610 LI89_05610 1268899 1270767 + heat shock protein 90 molecular chaperone gene gene1094 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05610 LI89_05615 LI89_05615 adk adk 1270993 1271637 + adenylate kinase essential enzyme that recycles AMP in active cells%3B converts ATP and AMP to two molecules of ADP gene gene1095 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05615 LI89_05620 LI89_05620 LI89_05620 1271753 1272709 + ferrochelatase gene gene1096 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05620 LI89_05625 LI89_05625 LI89_05625 1273087 1274343 + histidine kinase gene gene1097 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05625 LI89_05630 LI89_05630 LI89_05630 1274336 1275292 + WbcK protein gene gene1098 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05630 LI89_05635 LI89_05635 LI89_05635 1275294 1276169 + glycosyl transferase family 2 gene gene1099 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05635 LI89_05640 LI89_05640 LI89_05640 1276181 1277257 + glycosyltransferase gene gene1100 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05640 LI89_05645 LI89_05645 LI89_05645 1277348 1278451 + glycosyltransferase gene gene1101 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05645 LI89_05650 LI89_05650 LI89_05650 1278527 1279552 + glycosyl transferase gene gene1102 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05650 LI89_05655 LI89_05655 LI89_05655 1280114 1281550 + protein-PII uridylyltransferase gene gene1103 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05655 LI89_05660 LI89_05660 LI89_05660 1281605 1282621 + glycosyl transferase gene gene1104 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05660 LI89_05665 LI89_05665 LI89_05665 1282659 1283669 + UDP-glucose 4-epimerase gene gene1105 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05665 LI89_05670 LI89_05670 LI89_05670 1283733 1285037 + guanosine kinase catalyzes the formation of inosine/guanosine monophosphate from inosine or guanosine and ATP gene gene1106 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05670 LI89_05675 LI89_05675 LI89_05675 1285194 1286885 - cation:proton antiport protein YbaL%3B member of the CPA-2 family of antiporters%3B uncharacterized protein gene gene1107 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05675 LI89_05680 LI89_05680 LI89_05680 1287122 1288354 - Fosmidomycin resistance protein gene gene1108 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05680 LI89_05685 LI89_05685 ushA ushA 1288621 1290273 + 5'-nucleotidase catalyzes the degradation of periplasmic UDP-glucose to uridine%2C glucose-1-phosphate and inorganic phosphate%3B specific for uridine nucleotides gene gene1109 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05685 LI89_05690 LI89_05690 LI89_05690 1290828 1291307 - hypothetical protein gene gene1110 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05690 LI89_05695 LI89_05695 LI89_05695 1291581 1292390 - conjugal transfer protein TraB gene gene1111 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05695 LI89_05700 LI89_05700 copA copA 1292472 1295228 - copper-transporting ATPase gene gene1112 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05700 LI89_05705 LI89_05705 LI89_05705 1295425 1295844 + MerR family transcriptional regulator gene gene1113 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05705 LI89_05710 LI89_05710 LI89_05710 1295890 1296339 - membrane protein gene gene1114 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05710 LI89_05715 LI89_05715 LI89_05715 1296342 1297256 - protease gene gene1115 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05715 LI89_05720 LI89_05720 LI89_05720 1297453 1298322 - hypothetical protein gene gene1116 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05720 LI89_05725 LI89_05725 LI89_05725 1298519 1299295 - oxidoreductase gene gene1117 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05725 LI89_05730 LI89_05730 LI89_05730 1299339 1299974 - acyl-CoA thioesterase gene gene1118 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05730 LI89_05735 LI89_05735 LI89_05735 1299945 1300631 + ABC transporter ATP-binding protein gene gene1119 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05735 LI89_05740 LI89_05740 LI89_05740 1300628 1303060 + sugar ABC transporter permease gene gene1120 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05740 LI89_05745 LI89_05745 LI89_05745 1303099 1304163 - phosphoribosylaminoimidazole carboxylase gene gene1121 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05745 LI89_05750 LI89_05750 purE purE 1304160 1304684 - N5-carboxyaminoimidazole ribonucleotide mutase catalyzes the formation of 4-carboxy-5-aminoimidazole ribonucleotide from N5-carboxyaminoimidazole ribonucleotide gene gene1122 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05750 LI89_05755 LI89_05755 LI89_05755 1304861 1305583 - UDP-2%2C3-diacylglucosamine hydrolase catalyzes the formation of 2%2C3%3Ddiacylglucosamine 1-phosphate from UDP-2%2C3%3Ddiacylglucosamine gene gene1123 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05755 LI89_05760 LI89_05760 LI89_05760 1305594 1306088 - peptidylprolyl isomerase gene gene1124 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05760 LI89_05765 LI89_05765 cysS cysS 1306301 1307686 + cysteine--tRNA ligase catalyzes a two-step reaction%3B charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA gene gene1125 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05765 LI89_05770 LI89_05770 LI89_05770 1307890 1308102 - ribosome-associated protein gene gene1126 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05770 LI89_05775 LI89_05775 LI89_05775 1308102 1308983 - methenyltetrahydrofolate cyclohydrolase gene gene1127 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05775 LI89_05780 LI89_05780 LI89_05780 1309197 1309273 + tRNA-Arg tRNA gene1128 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05780 LI89_05785 LI89_05785 hypothetical protein hypothetical protein 1309306 1309513 - disrupted pseudogene gene1129 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05785 LI89_05795 LI89_05795 LI89_05795 1309960 1311075 + NADH:flavin oxidoreductase gene gene1130 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05795 LI89_05800 LI89_05800 LI89_05800 1311078 1311989 - LysR family transcriptional regulator gene gene1131 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05800 LI89_05805 LI89_05805 LI89_05805 1312224 1312550 + ethyl tert-butyl ether degradation protein EthD gene gene1132 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05805 LI89_05810 LI89_05810 LI89_05810 1312691 1313542 - 2%2C5-diketo-D-gluconic acid reductase gene gene1133 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05810 LI89_05815 LI89_05815 LI89_05815 1313673 1314737 - alpha/beta hydrolase gene gene1134 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05815 LI89_05820 LI89_05820 LI89_05820 1314834 1315598 - carboxymuconolactone decarboxylase gene gene1135 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05820 LI89_05825 LI89_05825 LI89_05825 1315576 1316055 - hypothetical protein gene gene1136 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05825 LI89_05830 LI89_05830 LI89_05830 1316124 1317617 - histidine kinase gene gene1137 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05830 LI89_05835 LI89_05835 LI89_05835 1317633 1318322 - transcriptional regulator response regulator in two-component regulatory system with CusS%3B regulates the copper efflux system gene gene1138 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05835 LI89_05840 LI89_05840 LI89_05840 1318559 1319608 + alpha/beta hydrolase gene gene1139 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05840 LI89_05845 LI89_05845 LI89_05845 1320264 1320791 + endonuclease gene gene1140 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05845 LI89_05855 LI89_05855 LI89_05855 1321377 1322498 + 50S ribosomal protein L16 arginine hydroxylase gene gene1141 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05855 LI89_05860 LI89_05860 LI89_05860 1322956 1324551 + histidine ammonia-lyase gene gene1142 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05860 LI89_05865 LI89_05865 LI89_05865 1324581 1326056 + lyase gene gene1143 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05865 LI89_05875 LI89_05875 LI89_05875 1326569 1328341 + metal ABC transporter permease gene gene1144 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05875 LI89_05880 LI89_05880 LI89_05880 1328359 1328646 - antibiotic biosynthesis monooxygenase gene gene1145 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05880 LI89_05885 LI89_05885 LI89_05885 1328976 1329170 + glycogen synthase gene gene1146 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05885 LI89_05890 LI89_05890 LI89_05890 1329421 1330065 + serine/threonine protein phosphatase gene gene1147 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05890 LI89_05895 LI89_05895 LI89_05895 1330216 1331181 - membrane protein gene gene1148 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05895 LI89_05900 LI89_05900 LI89_05900 1331555 1332145 + LuxR family transcriptional regulator gene gene1149 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05900 LI89_05905 LI89_05905 LI89_05905 1332332 1332811 - cold-shock protein gene gene1150 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05905 LI89_05910 LI89_05910 LI89_05910 1333078 1333287 + cold-shock protein gene gene1151 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05910 LI89_05915 LI89_05915 LI89_05915 1333587 1333970 - camphor resistance protein CrcB camphor resistance protein CrcB%3B may be involved in chromosome condensation%3B overexpression in Escherichia coli protects against decondensation by camphor%3B overexpressing the protein results in an increase in supercoiling gene gene1152 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05915 LI89_05920 LI89_05920 adrA adrA 1334018 1334920 - diguanylate cyclase catalyzes the conversion of 2 GTP into c-di-GMP%3B adrA overexpression induces cellulose biosynthesis%2C cell adherence to abiotic surfaces and swimming and swarming motility%3B AdrA acts post-transcriptionally on the bcsABZC operon activating cellulose biosynthesis gene gene1153 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05920 LI89_05925 LI89_05925 LI89_05925 1335274 1335492 + preprotein translocase subunit TatA gene gene1154 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05925 LI89_05930 LI89_05930 LI89_05930 1335635 1336600 - lipoyl synthase catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group gene gene1155 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05930 LI89_05935 LI89_05935 LI89_05935 1336816 1337502 - lipoate--protein ligase lipoyl/octanoyltransferase%3B catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein gene gene1156 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05935 LI89_05940 LI89_05940 LI89_05940 1337657 1337920 - hypothetical protein gene gene1157 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05940 LI89_05945 LI89_05945 LI89_05945 1338069 1339280 - D-alanyl-D-alanine carboxypeptidase penicillin-binding protein 5%3B removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors gene gene1158 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05945 LI89_05950 LI89_05950 LI89_05950 1339494 1340591 - rare lipoprotein A septal ring protein%2C suppressor of prc%2C minor lipoprotein gene gene1159 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05950 LI89_05955 LI89_05955 LI89_05955 1340601 1341713 - cell wall shape-determining protein gene gene1160 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05955 LI89_05960 LI89_05960 LI89_05960 1341750 1343645 - penicillin-binding protein 2 gene gene1161 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05960 LI89_05965 LI89_05965 LI89_05965 1343720 1344190 - 50S rRNA methyltransferase gene gene1162 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05965 LI89_05970 LI89_05970 LI89_05970 1344194 1344511 - ribosome-associated protein gene gene1163 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05970 LI89_05975 LI89_05975 LI89_05975 1344728 1345390 - nicotinate-nucleotide adenylyltransferase gene gene1164 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05975 LI89_05980 LI89_05980 holA holA 1345380 1346414 - DNA polymerase III subunit delta required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA gene gene1165 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05980 LI89_05985 LI89_05985 LI89_05985 1346411 1347034 - LPS biosynthesis protein rare lipoprotein B%3B involved in the assembly of LPS in the outer membrane gene gene1166 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05985 LI89_05990 LI89_05990 leuS leuS 1347049 1349631 - leucine--tRNA ligase leucine--tRNA ligase%3B LeuRS%3B class-I aminoacyl-tRNA synthetase%3B charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA%3B due to the large number of codons that tRNA(Leu) recognizes%2C the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA%2C but instead recognition is dependent on a conserved discriminator base A37 and a long arm%3B an editing domain hydrolyzes misformed products%3B in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase gene gene1167 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05990 LI89_05995 LI89_05995 LI89_05995 1349995 1350477 + hypothetical protein gene gene1168 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_05995 LI89_06000 LI89_06000 LI89_06000 1350558 1352090 - hypothetical protein gene gene1169 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06000 LI89_06005 LI89_06005 artP artP 1352350 1353075 - arginine transporter ATP-binding subunit With ArtMQJI transports arginine across the inner membrane gene gene1170 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06005 LI89_06010 LI89_06010 LI89_06010 1353075 1353749 - amino acid ABC transporter permease gene gene1171 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06010 LI89_06015 LI89_06015 LI89_06015 1353749 1354489 - amino acid ABC transporter permease with GltIKL is involved in the transport of glutamate and aspartate gene gene1172 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06015 LI89_06020 LI89_06020 LI89_06020 1354791 1355705 - amino acid transporter gene gene1173 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06020 LI89_06025 LI89_06025 LI89_06025 1356291 1356875 - pyridoxamine 5-phosphate oxidase gene gene1174 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06025 LI89_06030 LI89_06030 lnt lnt 1356884 1358461 - apolipoprotein acyltransferase Transfers the fatty acyl group on membrane lipoproteins gene gene1175 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06030 LI89_06035 LI89_06035 LI89_06035 1358469 1359347 - magnesium/cobalt efflux protein CorC involved in the transport of magnesium and cobalt ions gene gene1176 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06035 LI89_06040 LI89_06040 LI89_06040 1359462 1359935 - metal-binding heat shock protein gene gene1177 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06040 LI89_06045 LI89_06045 LI89_06045 1359932 1360987 - nucleoside triphosphate hydrolase gene gene1178 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06045 LI89_06050 LI89_06050 LI89_06050 1361303 1362727 - (dimethylallyl)adenosine tRNA methylthiotransferase catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A) gene gene1179 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06050 LI89_06055 LI89_06055 ubiF ubiF 1362971 1364152 + 2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol hydroxylase catalyzes the formation of 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1%2C4-benzoquinol from 2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol%3B functions in the biosynthesis of ubiquinone or coenzyme Q gene gene1180 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06055 LI89_06060 LI89_06060 LI89_06060 1364325 1364399 - tRNA-Gln tRNA gene1181 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06060 LI89_06065 LI89_06065 LI89_06065 1364405 1364481 - tRNA-Met tRNA gene1182 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06065 LI89_06070 LI89_06070 LI89_06070 1364513 1364587 - tRNA-Gln tRNA gene1183 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06070 LI89_06075 LI89_06075 LI89_06075 1364687 1364761 - tRNA-Gln tRNA gene1184 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06075 LI89_06080 LI89_06080 LI89_06080 1364785 1364869 - tRNA-Leu tRNA gene1185 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06080 LI89_06085 LI89_06085 LI89_06085 1364885 1364961 - tRNA-Met tRNA gene1186 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06085 LI89_06090 LI89_06090 asnB asnB 1365214 1366878 - asparagine synthetase B functions in asparagine biosynthesis%3B converts glutamine%2C aspartate%2C ATP%2C and water to glutamate%2C asparagine%2C pyrophosphate and AMP gene gene1187 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06090 LI89_06095 LI89_06095 LI89_06095 1367222 1367974 - UMP phosphatase gene gene1188 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06095 LI89_06100 LI89_06100 LI89_06100 1368185 1369405 - transcriptional regulator regulates the synthesis of glucosamine and N-acetylglucosamine by acting as a repressor of the nagEBACD operon and both a repressor and activator of the glmSU operon gene gene1189 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06100 LI89_06105 LI89_06105 nagA nagA 1369422 1370567 - N-acetylglucosamine-6-phosphate deacetylase catalyzes the formation of glucosamine 6-phosphate from N-acetylglucosamine 6-phosphate gene gene1190 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06105 LI89_06110 LI89_06110 nagB nagB 1370587 1371387 - glucosamine-6-phosphate deaminase catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate gene gene1191 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06110 LI89_06115 LI89_06115 LI89_06115 1371739 1373772 + PTS N-acetyl glucosamine transporter subunits IIABC phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel gene gene1192 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06115 LI89_06120 LI89_06120 LI89_06120 1373966 1375633 + glutamate--tRNA ligase catalyzes a two-step reaction%2C first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA gene gene1193 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06120 LI89_06125 LI89_06125 chiP chiP 1376394 1377797 + chitoporin outer membrane porin involved in the transport of chitooligosaccharides gene gene1194 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06125 LI89_06130 LI89_06130 LI89_06130 1377858 1378184 + hypothetical protein gene gene1195 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06130 LI89_06135 LI89_06135 LI89_06135 1378293 1380968 + beta-N-acetylhexosaminidase gene gene1196 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06135 LI89_06140 LI89_06140 fur fur 1381360 1381806 - ferric uptake regulator negatively regulates a number of operons that encode enzymes involved in iron transport%3B activated by manganese%3B forms a homodimer gene gene1197 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06140 LI89_06145 LI89_06145 LI89_06145 1382175 1382702 - flavodoxin FldA An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group gene gene1198 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06145 LI89_06150 LI89_06150 LI89_06150 1382925 1384583 + chemotaxis protein gene gene1199 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06150 LI89_06155 LI89_06155 LI89_06155 1384650 1384937 - LexA regulated protein gene gene1200 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06155 LI89_06160 LI89_06160 LI89_06160 1385281 1386075 - acyl-CoA esterase gene gene1201 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06160 LI89_06165 LI89_06165 LI89_06165 1386289 1386828 + replication initiation regulator SeqA negative modulator of the initiation of chromosome replication gene gene1202 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06165 LI89_06170 LI89_06170 LI89_06170 1386920 1388563 + phosphoglucomutase catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate gene gene1203 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06170 LI89_06175 LI89_06175 hemolysin hemolysin 1388627 1390076 - disrupted pseudogene gene1204 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06175 LI89_06180 LI89_06180 LI89_06180 1390302 1390730 - membrane protein gene gene1205 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06180 LI89_06185 LI89_06185 LI89_06185 1390823 1391512 - transcriptional regulator response regulator in two-component regulatory system with KdpD%3B regulates the kdp operon involved in potassium transport gene gene1206 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06185 LI89_06190 LI89_06190 LI89_06190 1391509 1394208 - sensor protein KdpD sensory histidine kinase in two-component regulatory system with KdpE%3B signal sensing protein gene gene1207 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06190 LI89_06195 LI89_06195 LI89_06195 1394218 1394856 - potassium-transporting ATPase subunit C One of the components of the high-affinity ATP-driven potassium transport (or KDP)system%2C which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions. The C subunit may be involved in assembly of the KDP complex gene gene1208 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06195 LI89_06200 LI89_06200 LI89_06200 1394938 1397004 - potassium-transporting ATPase subunit B One of the components of the high-affinity ATP-driven potassium transport (or KDP) system%2C which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions gene gene1209 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06200 LI89_06205 LI89_06205 LI89_06205 1397032 1398720 - potassium-transporting ATPase subunit A catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions gene gene1210 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06205 LI89_06210 LI89_06210 kdpF kdpF 1398721 1398810 - potassium-transporting ATPase subunit F one of the components of the high-affinity ATP-driven potassium transport (or KDP) system%2C which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions gene gene1211 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06210 LI89_06215 LI89_06215 LI89_06215 1399325 1399531 + membrane protein gene gene1212 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06215 LI89_06220 LI89_06220 LI89_06220 1399841 1400170 + peptide chain release factor 1 gene gene1213 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06220 LI89_06225 LI89_06225 LI89_06225 1400201 1400662 + lysine acyltransferase gene gene1214 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06225 LI89_06230 LI89_06230 LI89_06230 1400680 1410429 + peptidase C80 gene gene1215 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06230 LI89_06235 LI89_06235 LI89_06235 1410631 1411116 + hypothetical protein gene gene1216 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06235 LI89_06240 LI89_06240 LI89_06240 1411120 1412565 + deoxyribodipyrimidine photolyase UV-induced DNA repair%3B converts cyclobutane-type pyrimidine dimers created during exposure to UV ratiation to monomers%3B light dependent gene gene1217 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06240 LI89_06245 LI89_06245 LI89_06245 1412581 1413636 + 3'%2C5'-cyclic-nucleotide phosphodiesterase gene gene1218 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06245 LI89_06250 LI89_06250 LI89_06250 1413800 1414543 + metal-binding protein gene gene1219 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06250 LI89_06260 LI89_06260 LI89_06260 1414962 1415618 + hypothetical protein gene gene1220 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06260 LI89_06265 LI89_06265 LI89_06265 1415612 1416577 + hypothetical protein gene gene1221 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06265 LI89_06270 LI89_06270 LI89_06270 1416574 1417311 + LamB/YcsF family protein gene gene1222 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06270 LI89_06275 LI89_06275 LI89_06275 1417402 1418133 + membrane protein gene gene1223 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06275 LI89_06280 LI89_06280 LI89_06280 1418130 1419149 + membrane protein gene gene1224 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06280 LI89_06285 LI89_06285 LI89_06285 1419158 1419805 + pyrrolidone-carboxylate peptidase gene gene1225 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06285 LI89_06290 LI89_06290 gltA gltA 1419870 1421150 - type II citrate synthase type II enzyme%3B in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate%3B allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation%3B forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A%3B functions in TCA cycle%2C glyoxylate cycle and respiration%3B enzyme from Helicobacter pylori is not inhibited by NADH gene gene1226 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06290 LI89_06295 LI89_06295 LI89_06295 1421800 1422189 + succinate dehydrogenase gene gene1227 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06295 LI89_06300 LI89_06300 sdhD sdhD 1422183 1422530 + succinate dehydrogenase gene gene1228 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06300 LI89_06305 LI89_06305 sdhA sdhA 1422531 1424297 + succinate dehydrogenase part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers)%3B SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556%3B SdhC binds ubiquinone%3B oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol gene gene1229 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06305 LI89_06310 LI89_06310 sdhB sdhB 1424351 1425067 + succinate dehydrogenase part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers)%3B SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556%3B SdhC binds ubiquinone%3B oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol%3B the catalytic subunits are similar to fumarate reductase gene gene1230 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06310 LI89_06315 LI89_06315 LI89_06315 1425383 1428190 + 2-oxoglutarate dehydrogenase gene gene1231 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06315 LI89_06320 LI89_06320 LI89_06320 1428219 1429442 + dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex%3B catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA gene gene1232 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06320 LI89_06325 LI89_06325 sucC sucC 1429556 1430722 + succinyl-CoA synthetase subunit beta catalyzes the interconversion of succinyl-CoA and succinate gene gene1233 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06325 LI89_06330 LI89_06330 LI89_06330 1430722 1431600 + succinyl-CoA synthetase subunit alpha Catalyzes the only substrate-level phosphorylation in the TCA cycle gene gene1234 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06330 LI89_06335 LI89_06335 LI89_06335 1431814 1433712 - 2'%2C 3'-cyclic nucleotide 2'-phosphodiesterase gene gene1235 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06335 LI89_06340 LI89_06340 LI89_06340 1434314 1435882 + cytochrome d terminal oxidase subunit 1 part of the aerobic respiratory chain%3B catalyzes the ubiquinol to ubiquinone gene gene1236 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06340 LI89_06345 LI89_06345 LI89_06345 1435897 1437036 + cytochrome d ubiquinol oxidase subunit 2 gene gene1237 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06345 LI89_06350 LI89_06350 LI89_06350 1437049 1437186 + cytochrome bd biosynthesis protein gene gene1238 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06350 LI89_06355 LI89_06355 LI89_06355 1437161 1437460 + hypothetical protein gene gene1239 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06355 LI89_06360 LI89_06360 LI89_06360 1437608 1438009 + acyl-CoA thioesterase catalyzes the hydrolysis of short chain aliphatic acyl-CoA thioesters%3B physiological role remains unknown%3B involved in phospholipid metabolism%3B part of the Tol/Pal system of proteins that are critical for maintaining the integrity of the cell envelope components gene gene1240 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06360 LI89_06365 LI89_06365 LI89_06365 1438009 1438695 + colicin uptake protein TolQ membrane spanning protein in TolA-TolQ-TolR complex%3B involved in the tonB-independent uptake of group A colicins gene gene1241 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06365 LI89_06370 LI89_06370 LI89_06370 1438708 1439136 + colicin uptake protein TolR membrane spanning protein in TolA-TolQ-TolR complex%3B involved in the tonB-independent uptake of group A colicins gene gene1242 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06370 LI89_06375 LI89_06375 LI89_06375 1439248 1440393 + membrane protein gene gene1243 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06375 LI89_06380 LI89_06380 tolB tolB 1440513 1441805 + translocation protein TolB forms dimers%3B may be involved in cell envelope integrity%3B interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA gene gene1244 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06380 LI89_06385 LI89_06385 LI89_06385 1441856 1442362 + peptidoglycan-associated outer membrane lipoprotein gene gene1245 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06385 LI89_06390 LI89_06390 LI89_06390 1442372 1443181 + tol-pal system protein periplasmic protein that interacts with TolA%3B the tol-pal system is probably involved in maintaining cell envelope integrity gene gene1246 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06390 LI89_06395 LI89_06395 LI89_06395 1443374 1443449 + tRNA-Lys tRNA gene1247 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06395 LI89_06400 LI89_06400 LI89_06400 1443629 1443704 + tRNA-Lys tRNA gene1248 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06400 LI89_06405 LI89_06405 LI89_06405 1443843 1443918 + tRNA-Lys tRNA gene1249 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06405 LI89_06410 LI89_06410 LI89_06410 1444098 1444173 + tRNA-Lys tRNA gene1250 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06410 LI89_06415 LI89_06415 LI89_06415 1444780 1445841 + quinolinate synthetase 3 different subfamilies%3B catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate gene gene1251 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06415 LI89_06420 LI89_06420 LI89_06420 1446008 1446736 + nicotinamide riboside transporter PnuC involved in nicotinamide riboside transport gene gene1252 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06420 LI89_06425 LI89_06425 LI89_06425 1446812 1447744 - zinc transporter ZitB involved in zinc efflux across the cytoplasmic membrane gene gene1253 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06425 LI89_06430 LI89_06430 LI89_06430 1447990 1449042 + phospho-2-dehydro-3-deoxyheptonate aldolase catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate%2C phenylalanine sensitive gene gene1254 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06430 LI89_06435 LI89_06435 gpmA gpmA 1449118 1449870 - phosphoglyceromutase 2%2C3-bisphosphoglycerate-dependent%3B catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate gene gene1255 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06435 LI89_06440 LI89_06440 LI89_06440 1450077 1450928 - endonuclease gene gene1256 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06440 LI89_06445 LI89_06445 LI89_06445 1451566 1451901 - phosphate-starvation-inducible protein PsiF gene gene1257 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06445 LI89_06450 LI89_06450 galM galM 1452058 1453122 - galactose-1-epimerase mutarotase%3B catalyzes the conversion of beta-galactose to the alpha-anomer%3B links the metabolism of lactose and galactose gene gene1258 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06450 LI89_06455 LI89_06455 LI89_06455 1453116 1454267 - galactokinase catalyzes the formation of alpha-D-galactose 1-phosphate from D-galactose in galactose metabolism gene gene1259 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06455 LI89_06460 LI89_06460 LI89_06460 1454267 1455334 - galactose-1-phosphate uridylyltransferase catalyzes the interconversion of UDP-galactose and galactose-1-P with UDP-galactose and glucose-1-P gene gene1260 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06460 LI89_06465 LI89_06465 LI89_06465 1455344 1456360 - UDP-galactose-4-epimerase gene gene1261 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06465 LI89_06470 LI89_06470 LI89_06470 1456658 1457476 - CAAX protease gene gene1262 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06470 LI89_06475 LI89_06475 LI89_06475 1457672 1459165 - molybdenum ABC transporter ATP-binding protein contains 2 ATP-binding cassettes%3B involved in the transport of molybdenum gene gene1263 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06475 LI89_06480 LI89_06480 LI89_06480 1459274 1460065 - transcriptional regulator represses the modABCD operon and activates the moaABCD and napFDAGHBC operons gene gene1264 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06480 LI89_06485 LI89_06485 LI89_06485 1460301 1460441 + membrane protein gene gene1265 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06485 LI89_06490 LI89_06490 modA modA 1460658 1461434 + molybdate transporter with ModCB is involved in the high-affinity transport of molybdate gene gene1266 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06490 LI89_06495 LI89_06495 modB modB 1461434 1462129 + molybdate ABC transporter permease part of ModCBA molybdate transporter%3B member of ABC superfamily%3B inner membrane component%3B regulated by repressor protein ModE gene gene1267 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06495 LI89_06500 LI89_06500 modC modC 1462123 1463187 + molybdate transporter ATP-binding protein Part of the ABC transporter complex modABC involved in molybdenum import gene gene1268 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06500 LI89_06505 LI89_06505 LI89_06505 1463359 1464180 - pyridoxal phosphate phosphatase gene gene1269 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06505 LI89_06510 LI89_06510 LI89_06510 1464394 1465389 + 6-phosphogluconolactonase catalyzes the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate gene gene1270 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06510 LI89_06515 LI89_06515 LI89_06515 1465518 1466795 - adenosylmethionine-8-amino-7-oxononanoate aminotransferase catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7%2C8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate gene gene1271 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06515 LI89_06520 LI89_06520 LI89_06520 1466895 1467947 + biotin synthase catalyzes the formation of biotin from dethiobiotin gene gene1272 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06520 LI89_06525 LI89_06525 LI89_06525 1467947 1469098 + 8-amino-7-oxononanoate synthase catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine gene gene1273 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06525 LI89_06530 LI89_06530 LI89_06530 1469082 1469894 + biotin biosynthesis protein BioC methyltransferase%3B acyl carrier protein involved in an unidentified step in the synthesis of pimeloyl-CoA%2C a biotin precursor%3B member of the bio operon (bioABFCD)%3B in Escherichia coli%2C bioC-null mutants require biotin for growth gene gene1274 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06530 LI89_06535 LI89_06535 LI89_06535 1469887 1470600 + dethiobiotin synthetase gene gene1275 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06535 LI89_06540 LI89_06540 LI89_06540 1470712 1471419 - branched-chain amino acid ABC transporter ATP-binding protein gene gene1276 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06540 LI89_06545 LI89_06545 LI89_06545 1472383 1474395 + excinuclease ABC subunit B The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands%2C where it probes for the presence of a lesion gene gene1277 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06545 LI89_06550 LI89_06550 LI89_06550 1474474 1474722 + transporter gene gene1278 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06550 LI89_06555 LI89_06555 LI89_06555 1474737 1475660 - hypothetical protein gene gene1279 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06555 LI89_06560 LI89_06560 moaA moaA 1476113 1477093 + molybdenum cofactor biosynthesis protein A together with moaC%2C is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z gene gene1280 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06560 LI89_06565 LI89_06565 moaC moaC 1477125 1477604 + molybdenum cofactor biosynthesis protein MoaC MoaC%3B along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z%3B involved in molybdenum cofactor biosynthesis gene gene1281 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06565 LI89_06570 LI89_06570 moaD moaD 1477601 1477846 + molybdopterin synthase small subunit catalyzes the conversion of molybdopterin precursor Z into molybdopterin gene gene1282 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06570 LI89_06575 LI89_06575 LI89_06575 1477846 1478301 + hypothetical protein gene gene1283 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06575 LI89_06580 LI89_06580 LI89_06580 1478445 1479155 + membrane protein gene gene1284 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06580 LI89_06585 LI89_06585 LI89_06585 1479284 1480390 - membrane protein gene gene1285 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06585 LI89_06590 LI89_06590 LI89_06590 1480424 1481614 - membrane protein gene gene1286 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06590 LI89_06595 LI89_06595 LI89_06595 1481611 1483362 - multidrug ABC transporter ATP-binding protein gene gene1287 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06595 LI89_06600 LI89_06600 LI89_06600 1483376 1484362 - membrane protein gene gene1288 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06600 LI89_06605 LI89_06605 LI89_06605 1484411 1485121 - transcriptional regulator gene gene1289 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06605 LI89_06610 LI89_06610 LI89_06610 1485525 1486880 + ATP-dependent RNA helicase RhlE this helicase is not essential cell growth gene gene1290 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06610 LI89_06615 LI89_06615 LI89_06615 1487049 1487987 + tRNA-dihydrouridine synthase C gene gene1291 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06615 LI89_06620 LI89_06620 LI89_06620 1488056 1488685 - hypothetical protein gene gene1292 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06620 LI89_06625 LI89_06625 LI89_06625 1488765 1488941 - membrane protein gene gene1293 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06625 LI89_06630 LI89_06630 pbpG pbpG 1489171 1490106 + D-alanyl-D-alanine endopeptidase specifically hydrolyze the DD-diaminopimelate-alanine bonds in high-molecular-mass murein sacculi%3B Penicillin-binding protein 7 gene gene1294 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06630 LI89_06640 LI89_06640 LI89_06640 1490453 1492165 - lactate dehydrogenase component of the membrane-bound D-lactate oxidase%2C FAD-binding%2C NADH independent gene gene1295 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06640 LI89_06645 LI89_06645 LI89_06645 1492365 1492904 + adenylate cyclase gene gene1296 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06645 LI89_06650 LI89_06650 LI89_06650 1492968 1493309 - hypothetical protein gene gene1297 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06650 LI89_06655 LI89_06655 LI89_06655 1493686 1494789 + Suppressor of fused protein (SUFU) gene gene1298 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06655 LI89_06660 LI89_06660 LI89_06660 1494944 1495192 + hypothetical protein gene gene1299 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06660 LI89_06665 LI89_06665 LI89_06665 1495389 1496225 + phosphonate ABC transporter ATP-binding protein gene gene1300 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06665 LI89_06670 LI89_06670 LI89_06670 1496262 1497191 + phosphonate ABC transporter substrate-binding protein gene gene1301 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06670 LI89_06675 LI89_06675 LI89_06675 1497260 1498123 + phosphonate ABC transporter permease gene gene1302 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06675 LI89_06680 LI89_06680 LI89_06680 1498123 1499028 + phosphonate ABC transporter permease gene gene1303 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06680 LI89_06685 LI89_06685 LI89_06685 1499280 1499750 + hypothetical protein gene gene1304 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06685 LI89_06690 LI89_06690 LI89_06690 1500094 1501362 + branched-chain amino acid ABC transporter substrate-binding protein gene gene1305 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06690 LI89_06695 LI89_06695 LI89_06695 1501438 1503039 + urea ABC transporter permease gene gene1306 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06695 LI89_06700 LI89_06700 LI89_06700 1503039 1504115 + amino acid ABC transporter permease gene gene1307 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06700 LI89_06705 LI89_06705 LI89_06705 1504157 1504948 + urea ABC transporter ATP-binding protein gene gene1308 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06705 LI89_06710 LI89_06710 LI89_06710 1505076 1505774 + urea ABC transporter ATP-binding protein gene gene1309 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06710 LI89_06715 LI89_06715 sseA sseA 1505781 1506635 - 3-mercaptopyruvate sulfurtransferase catalyzes the transfer of a sulfur ion to cyanide or to other thiol compounds gene gene1310 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06715 LI89_06720 LI89_06720 LI89_06720 1507028 1508158 + myo-inositol 2-dehydrogenase gene gene1311 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06720 LI89_06725 LI89_06725 LI89_06725 1508322 1509380 + fatty acid desaturase gene gene1312 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06725 LI89_06735 LI89_06735 LI89_06735 1509748 1510680 + ABC transporter gene gene1313 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06735 LI89_06740 LI89_06740 LI89_06740 1510786 1511940 + osmoprotectant uptake system permease gene gene1314 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06740 LI89_06745 LI89_06745 LI89_06745 1511937 1512881 + ATP-binding protein gene gene1315 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06745 LI89_06750 LI89_06750 LI89_06750 1512878 1513708 + osmoprotectant uptake system permease gene gene1316 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06750 LI89_06755 LI89_06755 LI89_06755 1513763 1514542 + phosphate ABC transporter substrate-binding protein gene gene1317 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06755 LI89_06760 LI89_06760 LI89_06760 1514826 1515572 - dehydrogenase gene gene1318 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06760 LI89_06765 LI89_06765 LI89_06765 1515682 1516596 + LysR family transcriptional regulator gene gene1319 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06765 LI89_06770 LI89_06770 LI89_06770 1516581 1516769 - hypothetical protein gene gene1320 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06770 LI89_06775 LI89_06775 LI89_06775 1516851 1517741 - multidrug DMT transporter gene gene1321 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06775 LI89_06780 LI89_06780 LI89_06780 1518022 1519332 + alginate lyase gene gene1322 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06780 LI89_06785 LI89_06785 LI89_06785 1519457 1520572 - membrane protein gene gene1323 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06785 LI89_06790 LI89_06790 dinG dinG 1520961 1523144 + ATP-dependent DNA helicase DinG helicase involved in DNA repair and perhaps also replication gene gene1324 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06790 LI89_06795 LI89_06795 LI89_06795 1523457 1524161 + porin porin involved in osmoregulation allowing water to move into and out of the cell in response to osmotic pressure gene gene1325 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06795 LI89_06800 LI89_06800 LI89_06800 1524370 1525350 + glycosyl transferase gene gene1326 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06800 LI89_06805 LI89_06805 LI89_06805 1525570 1527432 + peptidase M3 gene gene1327 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06805 LI89_06810 LI89_06810 LI89_06810 1527584 1527844 - membrane protein gene gene1328 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06810 LI89_06815 LI89_06815 LI89_06815 1527971 1528612 - Asp/Glu/hydantoin racemase gene gene1329 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06815 LI89_06820 LI89_06820 LI89_06820 1528739 1529779 + 23S rRNA methyltransferase gene gene1330 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06820 LI89_06825 LI89_06825 LI89_06825 1530181 1531485 + chemotaxis protein gene gene1331 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06825 LI89_06830 LI89_06830 glnQ glnQ 1531578 1532300 - glutamine ABC transporter ATP-binding protein similar to ATP-binding component of ABC transporters gene gene1332 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06830 LI89_06835 LI89_06835 glnP glnP 1532297 1532953 - glutamine ABC transporter permease similar to permease component of ABC transporters%3B mutations impair ability of Escherichia coli to transport and utilize glutamine gene gene1333 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06835 LI89_06840 LI89_06840 glnH glnH 1533020 1533763 - glutamine ABC transporter substrate-bindnig protein similar to periplasmic-binding component of ABC transporters gene gene1334 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06840 LI89_06845 LI89_06845 LI89_06845 1534151 1534417 - hypothetical protein gene gene1335 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06845 LI89_06850 LI89_06850 LI89_06850 1534709 1535212 - DNA starvation/stationary phase protection protein Dps binds DNA in a non-sequence-specific manner and is abundant during stationary phase%3B forms a DNA-protein crystal that protects DNA from damage%3B required for normal starvation response and long-term stationary viability%3B forms a homododecameric complex and sequesters iron which provides protection against oxidative damage gene gene1336 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06850 LI89_06855 LI89_06855 LI89_06855 1535527 1536303 - trans-aconitate methyltransferase catalyzes the formation of (E)-3-(methoxycarbonyl)pent-2-enedioate and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and trans-aconitate gene gene1337 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06855 LI89_06860 LI89_06860 LI89_06860 1536328 1536993 - hypothetical protein gene gene1338 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06860 LI89_06865 LI89_06865 LI89_06865 1536990 1537544 - RNA polymerase sigma factor gene gene1339 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06865 LI89_06870 LI89_06870 LI89_06870 1537606 1538166 - fasciclin gene gene1340 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06870 LI89_06875 LI89_06875 LI89_06875 1538344 1538835 - acetyltransferase gene gene1341 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06875 LI89_06880 LI89_06880 LI89_06880 1538849 1539736 - threonine transporter gene gene1342 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06880 LI89_06885 LI89_06885 LI89_06885 1539791 1540015 + hypothetical protein gene gene1343 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06885 LI89_06890 LI89_06890 ompX ompX 1540139 1540666 + membrane protein OmpX%3B involved in cell adhesion%3B forms an eight-stranded antiparallel beta-barrel that protrudes from the cell surface%3B mutations in the gene increase cell-surface contact in fimbriated strains but decrease contact in nonfimbriated strains gene gene1344 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06890 LI89_06895 LI89_06895 LI89_06895 1540786 1541478 - hydrolase gene gene1345 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06895 LI89_06900 LI89_06900 LI89_06900 1541975 1542913 + cytochrome C551 gene gene1346 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06900 LI89_06905 LI89_06905 LI89_06905 1542968 1544380 + xaa-Pro aminopeptidase gene gene1347 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06905 LI89_06915 LI89_06915 LI89_06915 1544584 1546155 + ABC transporter ATP-binding protein gene gene1348 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06915 LI89_06920 LI89_06920 LI89_06920 1546222 1546977 - molybdopterin-synthase adenylyltransferase gene gene1349 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06920 LI89_06925 LI89_06925 LI89_06925 1547014 1548249 - molybdopterin biosynthesis protein MoeA is involved in the formation of active molybdenum cofactor and the chelation of molybdenum gene gene1350 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06925 LI89_06930 LI89_06930 LI89_06930 1548450 1548989 + membrane protein gene gene1351 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06930 LI89_06935 LI89_06935 LI89_06935 1549097 1550407 - arylsulfatase gene gene1352 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06935 LI89_06940 LI89_06940 LI89_06940 1550425 1551084 - phosphonate ABC transporter ATP-binding protein gene gene1353 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06940 LI89_06945 LI89_06945 LI89_06945 1551086 1552348 - RND transporter gene gene1354 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06945 LI89_06950 LI89_06950 LI89_06950 1552353 1554731 - membrane protein gene gene1355 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06950 LI89_06955 LI89_06955 LI89_06955 1554873 1555073 - hypothetical protein gene gene1356 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06955 LI89_06960 LI89_06960 LI89_06960 1555336 1556178 - S-formylglutathione hydrolase gene gene1357 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06960 LI89_06965 LI89_06965 LI89_06965 1556199 1557353 - S-(hydroxymethyl)glutathione dehydrogenase catalyzes the formation of S-formylglutathione from S-(hydroxymethyl)glutathione%3B also catalyzes the formation of aldehyde or ketone from alcohols gene gene1358 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06965 LI89_06970 LI89_06970 LI89_06970 1557498 1558367 - LysR family transcriptional regulator gene gene1359 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06970 LI89_06975 LI89_06975 LI89_06975 1558504 1559676 + MFS transporter gene gene1360 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06975 LI89_06980 LI89_06980 folE folE 1559831 1560493 + GTP cyclohydrolase involved in the first step of tetrahydrofolate biosynthesis%3B catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1%2C2%2C3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water%3B forms a homopolymer gene gene1361 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06980 LI89_06985 LI89_06985 LI89_06985 1560548 1561714 + hypothetical protein gene gene1362 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06985 LI89_06990 LI89_06990 LI89_06990 1561896 1562933 + transcriptional regulator controls transcription of galETKM gene gene1363 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06990 LI89_06995 LI89_06995 LI89_06995 1563287 1564279 + sugar ABC transporter substrate-binding protein wtih MglAC is involved in the transport of beta-methylgalactoside gene gene1364 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_06995 LI89_07000 LI89_07000 LI89_07000 1564475 1565995 + sugar ABC transporter ATP-binding protein gene gene1365 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07000 LI89_07005 LI89_07005 mglC mglC 1566016 1567026 + beta-methylgalactoside transporter permease ABC transporter%3B functions in galactose transport%3B part of MglA2C2B transporter complex gene gene1366 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07005 LI89_07010 LI89_07010 LI89_07010 1567137 1567991 - formate transporter gene gene1367 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07010 LI89_07020 LI89_07020 LI89_07020 1570812 1572959 - formate dehydrogenase selenocysteine-containing polypeptide%3B hydrogen linked formate dehydrogenase which catalyzes the oxidation of formate gene gene1368 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07020 LI89_07025 LI89_07025 LI89_07025 1572976 1573518 - effector protein gene gene1369 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07025 LI89_07030 LI89_07030 hycI hycI 1573874 1574347 - hydrogenase 3 maturation protease involved in the C-terminal processing of the large subunit of hydrogenase 3 HycE gene gene1370 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07030 LI89_07035 LI89_07035 LI89_07035 1574344 1574745 - formate hydrogenlyase maturation protein HycH gene gene1371 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07035 LI89_07040 LI89_07040 LI89_07040 1574738 1575541 - hydrogenase gene gene1372 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07040 LI89_07045 LI89_07045 LI89_07045 1575538 1576092 - formate hydrogenlyase complex iron-sulfur subunit electron transfer protein for hydrogenase-3%3B the formate hydrogenlyase complex comprises of a formate dehydrogenase%2C unidentified electron carriers and hydrogenase-3%3B in this non-energy conserving pathway%2C molecular hydrogen and carbodioxide are released from formate gene gene1373 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07045 LI89_07050 LI89_07050 hycE hycE 1576104 1577894 - hydrogenase 3 large subunit formate hydrogenlyase subunit 5%3B HycBCDEFG is part of the formate hydrogenlyase system which is involved in the cleaving of formate to dihydrogen and carbon dioxide gene gene1374 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07050 LI89_07055 LI89_07055 LI89_07055 1577896 1579533 - hydrogenase gene gene1375 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07055 LI89_07060 LI89_07060 hyfE hyfE 1579538 1580188 - hydrogenase 4 membrane subunit interacts with formate dehydrogenase to produce an active formate hydrogenlyase complex which cleaves formate to dihydrogen and carbon dioxide gene gene1376 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07060 LI89_07065 LI89_07065 LI89_07065 1580200 1581669 - hydrogenase 4 subunit D gene gene1377 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07065 LI89_07070 LI89_07070 hycD hycD 1581688 1582641 - hydrogenase 3 membrane subunit formate hydrogenlyase subunit 4%3B HycBCDEFG is part of the formate hydrogenlyase system which is involved in the cleaving of formate to dihydrogen and carbon dioxide gene gene1378 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07070 LI89_07075 LI89_07075 LI89_07075 1582653 1584680 - hydrogenase 4 subunit B gene gene1379 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07075 LI89_07080 LI89_07080 LI89_07080 1584677 1585318 - electron transporter gene gene1380 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07080 LI89_07085 LI89_07085 hypA hypA 1585724 1586071 + hydrogenase nickel incorporation protein plays a role in hydrogenase nickel cofactor insertion gene gene1381 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07085 LI89_07090 LI89_07090 LI89_07090 1586112 1586390 + hydrogenase gene gene1382 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07090 LI89_07095 LI89_07095 LI89_07095 1586442 1587257 - vancomycin high temperature exclusion protein involved in vancomycin sensitivity and other barrier functions of the cell envelope gene gene1383 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07095 LI89_07100 LI89_07100 LI89_07100 1587424 1589121 - malate dehydrogenase malic enzyme%3B oxaloacetate-decarboxylating%3B NAD-dependent%3B catalyzes the formation of pyruvate form malate gene gene1384 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07100 LI89_07105 LI89_07105 LI89_07105 1589587 1589934 + hypothetical protein gene gene1385 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07105 LI89_07110 LI89_07110 LI89_07110 1590008 1590892 - cytidine deaminase Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis gene gene1386 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07110 LI89_07115 LI89_07115 LI89_07115 1591031 1591726 - hypothetical protein gene gene1387 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07115 LI89_07120 LI89_07120 LI89_07120 1591723 1592130 - hypothetical protein gene gene1388 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07120 LI89_07125 LI89_07125 LI89_07125 1592229 1593449 - MFS transporter gene gene1389 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07125 LI89_07130 LI89_07130 LI89_07130 1593647 1594900 - signal peptide protein gene gene1390 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07130 LI89_07135 LI89_07135 LI89_07135 1594947 1596023 - sugar ABC transporter substrate-binding protein gene gene1391 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07135 LI89_07140 LI89_07140 LI89_07140 1596644 1597315 + membrane protein gene gene1392 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07140 LI89_07145 LI89_07145 metG metG 1597397 1599424 - methionine--tRNA ligase methionine--tRNA ligase%3B MetRS%3B adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate%3B some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not%3B four subfamilies exist based on sequence motifs and zinc content gene gene1393 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07145 LI89_07150 LI89_07150 LI89_07150 1599719 1600831 + antiporter gene gene1394 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07150 LI89_07155 LI89_07155 LI89_07155 1601097 1601738 + uridine kinase gene gene1395 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07155 LI89_07160 LI89_07160 LI89_07160 1601824 1602405 + deoxycytidine triphosphate deaminase gene gene1396 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07160 LI89_07165 LI89_07165 LI89_07165 1602470 1604317 + membrane assembly protein AsmA gene gene1397 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07165 LI89_07170 LI89_07170 dcuC dcuC 1604648 1606006 + C4-dicarboxylate transporter responsible for the transport of C4-dicarboxylates during anaerobic growth gene gene1398 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07170 LI89_07175 LI89_07175 LI89_07175 1606105 1607691 - membrane protein gene gene1399 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07175 LI89_07180 LI89_07180 LI89_07180 1608168 1609061 + UTP--glucose-1-phosphate uridylyltransferase together with GalF subunit composes the UTP--glucose-1-phosphate uridylyltransferase%2C an enzyme that catalyzes the formation of UDP-glucose from UTP and alpha-D-glucose 1-phosphate%3B regulates cellular levels of UDP-glucose gene gene1400 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07180 LI89_07185 LI89_07185 LI89_07185 1609127 1610020 + UTP--glucose-1-phosphate uridylyltransferase gene gene1401 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07185 LI89_07190 LI89_07190 LI89_07190 1610274 1611683 + 6-phosphogluconate dehydrogenase catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate gene gene1402 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07190 LI89_07195 LI89_07195 LI89_07195 1611943 1612557 - phosphoribosyl-ATP pyrophosphatase catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis gene gene1403 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07195 LI89_07200 LI89_07200 LI89_07200 1612551 1613327 - imidazole glycerol phosphate synthase gene gene1404 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07200 LI89_07205 LI89_07205 LI89_07205 1613309 1614046 - 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase gene gene1405 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07205 LI89_07210 LI89_07210 hisH hisH 1614052 1614642 - imidazole glycerol phosphate synthase with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate%2C 5-aminoimidazol-4-carboxamide ribonucleotide%2C and glutamate in histidine biosynthesis%3B the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide gene gene1406 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07210 LI89_07215 LI89_07215 LI89_07215 1614642 1615709 - imidazoleglycerol-phosphate dehydratase catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate gene gene1407 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07215 LI89_07220 LI89_07220 LI89_07220 1615706 1616830 - histidinol-phosphate aminotransferase catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis gene gene1408 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07220 LI89_07225 LI89_07225 hisD hisD 1616827 1618152 - histidinol dehydrogenase catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis%3B functions as a dimer gene gene1409 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07225 LI89_07230 LI89_07230 hisG hisG 1618156 1619055 - ATP phosphoribosyltransferase long form of enzyme%3B catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate%3B crucial role in histidine biosynthesis%3B forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors gene gene1410 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07230 LI89_07235 LI89_07235 LI89_07235 1619602 1620429 + hypothetical protein gene gene1411 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07235 LI89_07240 LI89_07240 LI89_07240 1620479 1621477 - sugar ABC transporter permease gene gene1412 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07240 LI89_07245 LI89_07245 LI89_07245 1621474 1622154 - sugar ABC transporter gene gene1413 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07245 LI89_07250 LI89_07250 LI89_07250 1622274 1623296 + transposase gene gene1414 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07250 LI89_07260 LI89_07260 LI89_07260 1624568 1625659 + oxidoreductase member of the iron-containing alcohol dehydrogenase family gene gene1415 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07260 LI89_07265 LI89_07265 LI89_07265 1625908 1626123 + hypothetical protein gene gene1416 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07265 LI89_07270 LI89_07270 LI89_07270 1626113 1627501 + Putrescine importer PuuP gene gene1417 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07270 LI89_07275 LI89_07275 sbcB sbcB 1627585 1629015 - exonuclease I Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates gene gene1418 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07275 LI89_07280 LI89_07280 LI89_07280 1629253 1630362 + thiamine biosynthesis protein ThiF gene gene1419 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07280 LI89_07285 LI89_07285 LI89_07285 1630508 1631566 + membrane protein gene gene1420 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07285 LI89_07290 LI89_07290 LI89_07290 1631730 1632047 + hypothetical protein gene gene1421 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07290 LI89_07295 LI89_07295 LI89_07295 1632137 1633120 - sugar ABC transporter permease gene gene1422 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07295 LI89_07300 LI89_07300 LI89_07300 1633123 1634061 - sugar ABC transporter permease gene gene1423 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07300 LI89_07305 LI89_07305 LI89_07305 1634138 1635619 - lipase gene gene1424 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07305 LI89_07310 LI89_07310 LI89_07310 1635700 1636683 - LacI family transcriptional regulator gene gene1425 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07310 LI89_07315 LI89_07315 LI89_07315 1637535 1639037 + hypothetical protein gene gene1426 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07315 LI89_07325 LI89_07325 LI89_07325 1640141 1641001 - GHMP kinase gene gene1427 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07325 LI89_07330 LI89_07330 LI89_07330 1640994 1642067 - threonine-phosphate decarboxylase cobalamin biosynthesis protein%3B decarboxylates L-threonine-O-3-phosphate to yield (R)-1-amino-2-propanol O-2-phosphate%2C the precursor for the linkage between the nucleotide loop and the corrin ring in cobalamin%3B structurally similar to histidinol phosphate aminotransferase gene gene1428 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07330 LI89_07335 LI89_07335 LI89_07335 1642100 1642882 - uroporphyrin-III methyltransferase catalyzes 2 sequential methylations%2C the formation of precorrin-1 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and uroporphyrin III%2C and the formation of precorrin-2 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and precorrin-1 gene gene1429 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07335 LI89_07340 LI89_07340 LI89_07340 1642891 1644129 - acetate kinase Enables the production of acetyl-CoA by phosphorylating acetate in the presence of ATP and a divalent cation gene gene1430 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07340 LI89_07345 LI89_07345 LI89_07345 1644157 1644591 - propanediol utilization protein gene gene1431 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07345 LI89_07350 LI89_07350 LI89_07350 1644596 1644946 - propanediol utilization protein gene gene1432 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07350 LI89_07355 LI89_07355 LI89_07355 1644946 1645503 - propanediol utilization protein gene gene1433 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07355 LI89_07360 LI89_07360 LI89_07360 1645529 1646920 - NADH dehydrogenase gene gene1434 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07360 LI89_07365 LI89_07365 LI89_07365 1646913 1648028 - propanediol utilization protein gene gene1435 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07365 LI89_07370 LI89_07370 LI89_07370 1648039 1649427 - aldehyde dehydrogenase gene gene1436 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07370 LI89_07375 LI89_07375 LI89_07375 1649427 1650443 - ATP:cob(I)alamin adenosyltransferase gene gene1437 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07375 LI89_07380 LI89_07380 LI89_07380 1650459 1650734 - ethanolamine utilization protein EutN gene gene1438 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07380 LI89_07385 LI89_07385 LI89_07385 1650738 1651235 - propanediol utilization protein gene gene1439 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07385 LI89_07390 LI89_07390 LI89_07390 1651232 1651879 - propanediol utilization protein catalyzes the formation of propionyl phosphate from propionyl-CoA in propanediol degradation gene gene1440 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07390 LI89_07395 LI89_07395 LI89_07395 1651879 1652481 - propanediol utilization protein gene gene1441 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07395 LI89_07400 LI89_07400 LI89_07400 1652503 1652778 - carboxysome structural protein EutM ethanolamine utilization protein%3B involved in the degredation of ethanolamine gene gene1442 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07400 LI89_07405 LI89_07405 LI89_07405 1652810 1653151 - propanediol dehydratase gene gene1443 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07405 LI89_07410 LI89_07410 LI89_07410 1653148 1654974 - glycerol dehydratase gene gene1444 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07410 LI89_07415 LI89_07415 pduE pduE 1655116 1655640 - propanediol dehydratase with pduCD catalyzes the formation of propionaldehyde from 1%2C2-propanediol gene gene1445 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07415 LI89_07420 LI89_07420 pduD pduD 1655655 1656326 - propanediol dehydratase with PduCE catalyzes the formation of propionaldehyde from 1%2C2-propanediol gene gene1446 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07420 LI89_07425 LI89_07425 pduC pduC 1656339 1658003 - propanediol dehydratase with pduED catalyzes the formation of propionaldehyde from 1%2C2-propanediol gene gene1447 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07425 LI89_07430 LI89_07430 LI89_07430 1658024 1658851 - propanediol utilization protein carboxysome shell protein%3B may be involved in the formation of the polyhedral organelles involved in propanediol degradation gene gene1448 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07430 LI89_07435 LI89_07435 LI89_07435 1658851 1659147 - carboxysome structural protein EutM ethanolamine utilization protein%3B involved in the degredation of ethanolamine gene gene1449 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07435 LI89_07440 LI89_07440 LI89_07440 1659750 1660565 + glycerol uptake facilitator GlpF involved in the transport of glycerol into the cell gene gene1450 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07440 LI89_07445 LI89_07445 LI89_07445 1660858 1661760 + regulatory protein gene gene1451 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07445 LI89_07450 LI89_07450 LI89_07450 1662416 1663819 + cobyrinic acid a%2Cc-diamide synthase gene gene1452 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07450 LI89_07455 LI89_07455 LI89_07455 1663816 1664772 + cobalamin biosynthesis protein CobD%3B CbiB in Salmonella%3B converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group gene gene1453 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07455 LI89_07460 LI89_07460 cbiC cbiC 1664786 1665433 + precorrin-8X methylmutase catalyzes the interconversion of cobalt-precorrin-8X and cobyrinic acid in the anaerobic biosynthesis of cobalamin gene gene1454 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07460 LI89_07465 LI89_07465 cbiD cbiD 1665430 1666611 + cobalt-precorrin-6A synthase Catalyzes the methylation of C-1 in cobalt-precorrin-5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A gene gene1455 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07465 LI89_07470 LI89_07470 LI89_07470 1666608 1667210 + cobalt-precorrin-6Y C(5)-methyltransferase catalyzes the methylation of C-5 in cobalt-precorrin-6Y to form cobalt-precorrin-7W-a gene gene1456 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07470 LI89_07475 LI89_07475 LI89_07475 1667200 1667769 + cobalt-precorrin-6Y C(15)-methyltransferase catalyzes the methylation of either C-15 or C-5 in cobalt-precorrin-6Y to form cobalt-precorrin-7W%3B decarboxylating gene gene1457 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07475 LI89_07480 LI89_07480 cbiF cbiF 1667912 1668598 + cobalt-precorrin-4 C(11)-methyltransferase catalyzes the formation of cobalt-precorrin-5 from cobalt-precorrin-4 gene gene1458 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07480 LI89_07485 LI89_07485 LI89_07485 1668579 1669679 + cobalamin biosynthesis protein CbiG catalyzes the formation of cobalt-precorrin 4 from cobalt-precorrin 3 gene gene1459 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07485 LI89_07490 LI89_07490 cbiH cbiH 1669679 1670404 + cobalt-precorrin-3B C(17)-methyltransferase catalyzes the formation of cobalt-precorrin-4 from cobalt-precorrin-3B gene gene1460 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07490 LI89_07495 LI89_07495 LI89_07495 1670435 1671262 + cobalt-precorrin-6X reductase gene gene1461 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07495 LI89_07500 LI89_07500 LI89_07500 1671259 1672053 + sirohydrochlorin cobaltochelatase gene gene1462 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07500 LI89_07505 LI89_07505 LI89_07505 1672053 1672763 + cobalt-precorrin-2 C(20)-methyltransferase catalyzes the formation of precorrin-3A from precorrin-2 gene gene1463 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07505 LI89_07510 LI89_07510 LI89_07510 1672817 1673554 + cobalamin biosynthesis protein CbiM gene gene1464 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07510 LI89_07515 LI89_07515 LI89_07515 1673556 1673837 + cobalamin biosynthesis protein CbiN periplasmic cobalt binding component of the cobalt transport system gene gene1465 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07515 LI89_07520 LI89_07520 LI89_07520 1673824 1674501 + cobalamin biosynthesis protein CbiQ gene gene1466 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07520 LI89_07525 LI89_07525 cbiO cbiO 1674513 1675328 + cobalt transporter ATP-binding subunit with CbiNQ forms the ABC transporter for cobalt import gene gene1467 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07525 LI89_07530 LI89_07530 LI89_07530 1675340 1676878 + cobalamin biosynthesis protein CobQ gene gene1468 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07530 LI89_07535 LI89_07535 cobU cobU 1676875 1677420 + adenosylcobinamide kinase catalyzes ATP-dependent phosphorylation of adenosylcobinamide to form adenosylcobinamide phosphate and the addition of guanosine monophosphate to adenosylcobinamide phosphate to form adenosylcobinamide-GDP gene gene1469 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07535 LI89_07540 LI89_07540 cobS cobS 1677417 1678163 + cobalamin synthase catalyzes the formation of adenosylcobalamin from Ado-cobinamide-GDP and alpha-ribazole gene gene1470 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07540 LI89_07545 LI89_07545 LI89_07545 1678201 1678866 + alpha-ribazole phosphatase gene gene1471 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07545 LI89_07550 LI89_07550 cobT cobT 1678871 1679929 + nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5%2C6-dimethylbenzimidazole gene gene1472 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07550 LI89_07555 LI89_07555 LI89_07555 1680071 1680964 + XRE family transcriptional regulator gene gene1473 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07555 LI89_07560 LI89_07560 LI89_07560 1680984 1681832 - multidrug DMT transporter gene gene1474 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07560 LI89_07565 LI89_07565 LI89_07565 1682089 1682946 + purine nucleoside phosphorylase gene gene1475 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07565 LI89_07570 LI89_07570 LI89_07570 1683098 1684354 + nucleoside permease gene gene1476 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07570 LI89_07575 LI89_07575 LI89_07575 1685245 1685847 + LuxR family transcriptional regulator gene gene1477 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07575 LI89_07580 LI89_07580 LI89_07580 1685979 1686464 - T6SS protein Cts1W gene gene1478 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07580 LI89_07585 LI89_07585 LI89_07585 1686471 1688141 - membrane protein gene gene1479 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07585 LI89_07590 LI89_07590 LI89_07590 1688142 1688789 - membrane protein gene gene1480 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07590 LI89_07595 LI89_07595 LI89_07595 1688786 1690123 - glycosyltransferase gene gene1481 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07595 LI89_07600 LI89_07600 LI89_07600 1690162 1691166 - fimbrial protein gene gene1482 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07600 LI89_07605 LI89_07605 LI89_07605 1691173 1692321 - membrane protein gene gene1483 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07605 LI89_07610 LI89_07610 LI89_07610 1692396 1693421 - type VI secretion protein gene gene1484 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07610 LI89_07615 LI89_07615 LI89_07615 1693421 1695301 - type VI secretion protein gene gene1485 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07615 LI89_07620 LI89_07620 LI89_07620 1696021 1698690 + ATPase AAA gene gene1486 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07620 LI89_07625 LI89_07625 LI89_07625 1698866 1699417 + F17 fimbrial protein gene gene1487 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07625 LI89_07630 LI89_07630 LI89_07630 1699576 1700322 + pilus assembly protein gene gene1488 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07630 LI89_07640 LI89_07640 LI89_07640 1703086 1703688 + fimbrial protein gene gene1489 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07640 LI89_07645 LI89_07645 LI89_07645 1703793 1704317 + hypothetical protein gene gene1490 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07645 LI89_07650 LI89_07650 LI89_07650 1704341 1705837 + EvpB family type VI secretion protein gene gene1491 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07650 LI89_07655 LI89_07655 LI89_07655 1706169 1706654 + Hcp1 family type VI secretion system effector gene gene1492 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07655 LI89_07660 LI89_07660 LI89_07660 1706876 1707412 + type VI secretion protein gene gene1493 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07660 LI89_07665 LI89_07665 LI89_07665 1707416 1708765 + type VI secretion protein gene gene1494 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07665 LI89_07670 LI89_07670 LI89_07670 1708762 1710138 + membrane protein gene gene1495 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07670 LI89_07675 LI89_07675 LI89_07675 1710147 1713980 + type VI secretion protein IcmF gene gene1496 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07675 LI89_07685 LI89_07685 LI89_07685 1717858 1718118 + PAAR motif protein gene gene1497 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07685 LI89_07690 LI89_07690 LI89_07690 1718124 1718966 + hypothetical protein gene gene1498 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07690 LI89_07695 LI89_07695 LI89_07695 1718992 1719819 + ImpE family T6SS protein Cts1E gene gene1499 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07695 LI89_07700 LI89_07700 LI89_07700 1719819 1720298 + lysozyme gene gene1500 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07700 LI89_07705 LI89_07705 LI89_07705 1720430 1721794 - argininosuccinate synthase catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis gene gene1501 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07705 LI89_07710 LI89_07710 LI89_07710 1722152 1723429 + multidrug transporter gene gene1502 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07710 LI89_07715 LI89_07715 LI89_07715 1723813 1725417 + PTS sugar transporter gene gene1503 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07715 LI89_07720 LI89_07720 LI89_07720 1725460 1726299 + histidine biosynthesis protein gene gene1504 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07720 LI89_07725 LI89_07725 LI89_07725 1726479 1727288 + haloacid dehalogenase gene gene1505 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07725 LI89_07730 LI89_07730 LI89_07730 1727393 1728154 + DeoR faimly transcriptional regulator gene gene1506 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07730 LI89_07735 LI89_07735 LI89_07735 1728225 1729397 - beta-lactamase gene gene1507 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07735 LI89_07740 LI89_07740 LI89_07740 1729576 1730550 + chemotaxis protein CheV gene gene1508 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07740 LI89_07745 LI89_07745 LI89_07745 1730630 1731214 - TetR family transcriptional regulator gene gene1509 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07745 LI89_07750 LI89_07750 LI89_07750 1731405 1732196 + AraC family transcriptional regulator gene gene1510 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07750 LI89_07755 LI89_07755 LI89_07755 1732298 1732711 - alkylhydroperoxidase gene gene1511 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07755 LI89_07760 LI89_07760 LI89_07760 1732737 1734227 - ABC transporter ATP-binding protein gene gene1512 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07760 LI89_07765 LI89_07765 LI89_07765 1734220 1735305 - hypothetical protein gene gene1513 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07765 LI89_07770 LI89_07770 LI89_07770 1735302 1737425 - ABC transporter permease gene gene1514 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07770 LI89_07775 LI89_07775 LI89_07775 1737480 1738478 - sugar ABC transporter substrate-binding protein gene gene1515 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07775 LI89_07780 LI89_07780 LI89_07780 1738510 1739493 - ABC transporter permease gene gene1516 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07780 LI89_07785 LI89_07785 LI89_07785 1739710 1740606 - LysR family transcriptional regulator gene gene1517 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07785 LI89_07790 LI89_07790 LI89_07790 1740782 1741792 + alcohol dehydrogenase gene gene1518 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07790 LI89_07795 LI89_07795 LI89_07795 1741942 1743408 - GntR family transcriptional regulator gene gene1519 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07795 LI89_07800 LI89_07800 LI89_07800 1743516 1743974 + GNAT family acetyltransferase gene gene1520 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07800 LI89_07805 LI89_07805 LI89_07805 1744296 1745186 + 2-dehydropantoate 2-reductase gene gene1521 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07805 LI89_07810 LI89_07810 LI89_07810 1745298 1745373 - tRNA-Asn tRNA gene1522 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07810 LI89_07815 LI89_07815 LI89_07815 1745543 1746283 - molecular chaperone gene gene1523 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07815 LI89_07820 LI89_07820 LI89_07820 1746280 1747614 - hypothetical protein gene gene1524 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07820 LI89_07825 LI89_07825 LI89_07825 1747629 1750253 - fimbrial protein gene gene1525 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07825 LI89_07830 LI89_07830 LI89_07830 1750302 1751036 - pilus assembly protein gene gene1526 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07830 LI89_07835 LI89_07835 LI89_07835 1751129 1751659 - fimbrial protein gene gene1527 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07835 LI89_07840 LI89_07840 LI89_07840 1752037 1755756 - histidine kinase gene gene1528 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07840 LI89_07845 LI89_07845 LI89_07845 1755836 1756468 - LuxR family transcriptional regulator gene gene1529 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07845 LI89_07855 LI89_07855 LI89_07855 1758077 1760170 + hypothetical protein gene gene1530 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07855 LI89_07860 LI89_07860 LI89_07860 1761137 1761724 + amidophosphoribosyltransferase gene gene1531 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07860 LI89_07865 LI89_07865 LI89_07865 1761727 1762281 + hypothetical protein gene gene1532 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07865 LI89_07870 LI89_07870 LI89_07870 1762638 1763846 + hypothetical protein gene gene1533 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07870 LI89_07875 LI89_07875 LI89_07875 1764439 1765194 + hypothetical protein gene gene1534 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07875 LI89_07880 LI89_07880 LI89_07880 1765339 1766466 - zinc peptidase gene gene1535 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07880 LI89_07885 LI89_07885 LI89_07885 1766470 1767087 - peroxidase gene gene1536 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07885 LI89_07895 LI89_07895 LI89_07895 1768032 1768334 + transposase gene gene1537 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07895 LI89_07900 LI89_07900 LI89_07900 1768361 1769200 + transposase gene gene1538 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07900 LI89_07905 LI89_07905 LI89_07905 1769794 1769869 - tRNA-Asn tRNA gene1539 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07905 LI89_07910 LI89_07910 fbpC fbpC 1770066 1771157 - ferric transporter ATP-binding subunit Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import gene gene1540 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07910 LI89_07915 LI89_07915 LI89_07915 1771183 1773261 - iron ABC transporter permease gene gene1541 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07915 LI89_07920 LI89_07920 LI89_07920 1773377 1774408 - hypothetical protein gene gene1542 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07920 LI89_07925 LI89_07925 LI89_07925 1774525 1775856 - MFS transporter gene gene1543 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07925 LI89_07930 LI89_07930 LI89_07930 1775945 1777522 - histidine kinase gene gene1544 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07930 LI89_07935 LI89_07935 LI89_07935 1777524 1778153 - transcriptional regulator gene gene1545 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07935 LI89_07940 LI89_07940 dpiA dpiA 1778355 1779041 - two-component response regulator DpiA regulates the expression of citrate fermentation genes gene gene1546 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07940 LI89_07945 LI89_07945 LI89_07945 1779063 1780640 - histidine kinase gene gene1547 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07945 LI89_07950 LI89_07950 LI89_07950 1781076 1782152 + [citrate [pro-3S]-lyase] ligase activates citrate lyase by acetylation of the gamma subunit gene gene1548 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07950 LI89_07955 LI89_07955 LI89_07955 1782253 1782546 + citrate lyase subunit gamma acyl carrier protein%3B with CitE and CitF catalyzes the formation of oxaloacetate from citrate gene gene1549 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07955 LI89_07960 LI89_07960 LI89_07960 1782546 1783439 + citrate lyase subunit beta citryl-ACP lyase%3B catalyzes the formation of acetate and oxaloacetate from citrate gene gene1550 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07960 LI89_07965 LI89_07965 LI89_07965 1783443 1784960 + citrate lyase subunit alpha citrate-ACP transferase%2C the alpha subunit catalyzes the formation of (3S)-citryl-CoA from acetyl-CoA and citrate gene gene1551 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07965 LI89_07970 LI89_07970 LI89_07970 1784964 1785512 + 2-(5'-triphosphoribosyl)-3'-dephospho CoA synthase gene gene1552 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07970 LI89_07975 LI89_07975 LI89_07975 1785490 1786485 + 2-(5'-triphosphoribosyl)-3'-dephospho CoA synthase gene gene1553 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07975 LI89_07980 LI89_07980 LI89_07980 1786479 1787942 + citrate:succinate antiporter involved in the transport of citrate into the cell along with the export of succinate out of the cell gene gene1554 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07980 LI89_07985 LI89_07985 LI89_07985 1788203 1789495 - membrane protein gene gene1555 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07985 LI89_07990 LI89_07990 LI89_07990 1789514 1790020 - C4-dicarboxylate ABC transporter gene gene1556 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07990 LI89_07995 LI89_07995 LI89_07995 1790144 1791121 - C4-dicarboxylate ABC transporter gene gene1557 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_07995 LI89_08000 LI89_08000 LI89_08000 1791491 1792240 + phosphopantetheinyl transferase gene gene1558 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08000 LI89_08005 LI89_08005 LI89_08005 1792348 1793250 + aspartyl beta-hydroxylase gene gene1559 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08005 LI89_08010 LI89_08010 LI89_08010 1793970 1795367 + major facilitator transporter gene gene1560 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08010 LI89_08015 LI89_08015 LI89_08015 1795420 1795851 + PTS sugar transporter subunit IIA gene gene1561 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08015 LI89_08020 LI89_08020 LI89_08020 1795960 1797216 - RND transporter gene gene1562 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08020 LI89_08025 LI89_08025 LI89_08025 1797334 1798122 - hypothetical protein gene gene1563 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08025 LI89_08030 LI89_08030 LI89_08030 1798248 1798700 - hypothetical protein gene gene1564 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08030 LI89_08035 LI89_08035 LI89_08035 1798951 1800438 - membrane protein gene gene1565 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08035 LI89_08040 LI89_08040 LI89_08040 1800431 1801645 - ABC transporter permease gene gene1566 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08040 LI89_08045 LI89_08045 LI89_08045 1801638 1802339 - ABC transporter ATP-binding protein gene gene1567 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08045 LI89_08050 LI89_08050 LI89_08050 1802658 1803197 + hypothetical protein gene gene1568 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08050 LI89_08055 LI89_08055 LI89_08055 1803208 1803906 - pseudouridylate synthase gene gene1569 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08055 LI89_08060 LI89_08060 LI89_08060 1804044 1804119 - tRNA-Asn tRNA gene1570 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08060 LI89_08065 LI89_08065 LI89_08065 1804299 1805102 - DgsA anti-repressor MtfA Mlc anti-repressor%3B regulates ptsG by binding and inactivating Mlc gene gene1571 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08065 LI89_08070 LI89_08070 LI89_08070 1805639 1806631 + ABC transporter substrate-binding protein gene gene1572 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08070 LI89_08075 LI89_08075 LI89_08075 1806636 1808204 + sugar ABC transporter ATPase gene gene1573 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08075 LI89_08080 LI89_08080 LI89_08080 1808201 1809217 + membrane protein gene gene1574 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08080 LI89_08085 LI89_08085 LI89_08085 1809217 1810227 + ABC transporter permease gene gene1575 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08085 LI89_08090 LI89_08090 LI89_08090 1810237 1811181 + kinase gene gene1576 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08090 LI89_08095 LI89_08095 LI89_08095 1811206 1812222 - dihydrofolate reductase gene gene1577 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08095 LI89_08100 LI89_08100 LI89_08100 1812219 1813742 - carbohydrate kinase gene gene1578 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08100 LI89_08105 LI89_08105 LI89_08105 1814398 1815039 + beta-fimbriae major subunit gene gene1579 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08105 LI89_08110 LI89_08110 LI89_08110 1815160 1815801 + beta-fimbriae major subunit gene gene1580 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08110 LI89_08115 LI89_08115 LI89_08115 1815801 1816448 + beta-fimbriae major subunit gene gene1581 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08115 LI89_08120 LI89_08120 LI89_08120 1816569 1818947 + membrane protein gene gene1582 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08120 LI89_08125 LI89_08125 LI89_08125 1819008 1819751 + fimbrial protein gene gene1583 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08125 LI89_08135 LI89_08135 LI89_08135 1820008 1821285 - glucose-1-phosphate adenylyltransferase gene gene1584 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08135 LI89_08140 LI89_08140 LI89_08140 1821617 1822942 + phosphoanhydride phosphorylase gene gene1585 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08140 LI89_08145 LI89_08145 LI89_08145 1823196 1823396 - selenoprotein YdfZ gene gene1586 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08145 LI89_08150 LI89_08150 LI89_08150 1823614 1824516 - hypothetical protein gene gene1587 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08150 LI89_08155 LI89_08155 LI89_08155 1824596 1825054 - AsnC family transcriptional regulator gene gene1588 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08155 LI89_08160 LI89_08160 LI89_08160 1825223 1825756 - membrane protein gene gene1589 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08160 LI89_08165 LI89_08165 LI89_08165 1825994 1827004 - zinc-binding dehydrogenase gene gene1590 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08165 LI89_08170 LI89_08170 lacZ lacZ 1827366 1830518 - beta-D-galactosidase forms a homotetramer%3B hydrolyzes lactose disaccharide to galactose and glucose%3B converts lactose to allolactose which is the natural inducer of the lac operon gene gene1591 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08170 LI89_08175 LI89_08175 lacI lacI 1830713 1831747 - lac repressor transcriptional repressor of lac operon%3B forms a homotetramer as a dimer of dimers%3B binds specific sites in lac operon resulting in DNA looping between the operators%3B binds allolactose as inducer gene gene1592 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08175 LI89_08180 LI89_08180 LI89_08180 1832229 1832441 + cold-shock protein gene gene1593 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08180 LI89_08190 LI89_08190 LI89_08190 1832692 1832883 + hypothetical protein gene gene1594 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08190 LI89_08195 LI89_08195 LI89_08195 1833016 1834755 - chemotaxis protein gene gene1595 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08195 LI89_08200 LI89_08200 LI89_08200 1835079 1836440 - CAIB/BAIF family CoA transferase gene gene1596 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08200 LI89_08205 LI89_08205 LI89_08205 1837028 1837726 + membrane protein gene gene1597 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08205 LI89_08210 LI89_08210 LI89_08210 1837943 1840645 + magnesium ABC transporter ATPase P-type%3B involved in magnesium transport into the cytoplasm gene gene1598 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08210 LI89_08215 LI89_08215 LI89_08215 1840711 1841745 - NADP-dependent oxidoreductase gene gene1599 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08215 LI89_08220 LI89_08220 LI89_08220 1841910 1842329 - universal stress protein UspC ppGpp-dependent%3B membrane-associated%2C stress protein produced under conditions of nutrient deprivation%2C osmotic shock and oxidative stress gene gene1600 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08220 LI89_08225 LI89_08225 LI89_08225 1843353 1843703 + transcriptional regulator with FlhC is involved in the activation of class 2 flagellar genes and is involved in the regulation of a number of other genetic systems gene gene1601 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08225 LI89_08230 LI89_08230 LI89_08230 1843707 1844288 + transcriptional regulator With FlhD is involved in the activation of class 2 flagellar genes and as well as a number of other genetic systems gene gene1602 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08230 LI89_08235 LI89_08235 LI89_08235 1844426 1845313 + flagellar motor protein MotA With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine gene gene1603 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08235 LI89_08240 LI89_08240 LI89_08240 1845310 1846554 + hypothetical protein gene gene1604 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08240 LI89_08245 LI89_08245 LI89_08245 1846571 1848625 + chemotaxis protein CheA gene gene1605 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08245 LI89_08250 LI89_08250 LI89_08250 1848806 1849303 + chemotaxis protein CheW gene gene1606 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08250 LI89_08255 LI89_08255 LI89_08255 1849585 1851258 + chemotaxis protein serine sensor receptor gene gene1607 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08255 LI89_08260 LI89_08260 LI89_08260 1851442 1853079 + methyl-accepting protein IV mediates taxis toward dipeptides gene gene1608 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08260 LI89_08265 LI89_08265 LI89_08265 1853108 1853968 + chemotaxis protein CheR methylates the MCP gene gene1609 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08265 LI89_08270 LI89_08270 LI89_08270 1853968 1855017 + chemotaxis protein regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins gene gene1610 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08270 LI89_08275 LI89_08275 LI89_08275 1855092 1855481 + chemotaxis protein CheY chemotaxis regulator that%2C when phosphorylated%2C interacts with the flagellar motor causing the flagella to spin clockwise which causes the cell to tumble gene gene1611 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08275 LI89_08280 LI89_08280 LI89_08280 1855491 1856135 + chemotaxis protein CheZ cytosolic phosphatase which functions in the chemotaxis signal transduction complex by controlling the level of phosphorylated CheY through dephosphorylation gene gene1612 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08280 LI89_08285 LI89_08285 LI89_08285 1856224 1857870 - peptidase S8 gene gene1613 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08285 LI89_08290 LI89_08290 flhB flhB 1858281 1859432 + flagellar biosynthesis protein FlhB membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export gene gene1614 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08290 LI89_08295 LI89_08295 LI89_08295 1859432 1861510 + flagellar biosynthesis protein FlhA gene gene1615 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08295 LI89_08300 LI89_08300 LI89_08300 1861510 1861932 + flagellar protein flhE gene gene1616 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08300 LI89_08305 LI89_08305 LI89_08305 1862439 1864952 + Invasin gene gene1617 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08305 LI89_08310 LI89_08310 LI89_08310 1864955 1865395 - flagellar biosynthesis protein FlgN export chaperone for FlgK and FlgL gene gene1618 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08310 LI89_08315 LI89_08315 LI89_08315 1865447 1865746 - flagellar biosynthesis anti-sigma factor FlgM regulates the flagellar specific sigma28 transcription factor gene gene1619 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08315 LI89_08320 LI89_08320 LI89_08320 1865894 1866574 - flagellar basal body P-ring biosynthesis protein FlgA gene gene1620 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08320 LI89_08325 LI89_08325 LI89_08325 1866758 1867171 + flagellar biosynthesis protein FlgB gene gene1621 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08325 LI89_08330 LI89_08330 flgC flgC 1867177 1867581 + flagellar basal body rod protein FlgC with FlgF and B makes up the proximal portion of the flagellar basal body rod gene gene1622 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08330 LI89_08335 LI89_08335 flgD flgD 1867597 1868283 + flagellar basal body rod modification protein acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod%3B Yersinia%2C Vibrio parahaemolyticus%2C Bradyrhizobium and other organisms have 2 copies of some flagellar genes%3B in V. parahaemolyticus one set used for lateral flagella production and the other is used for the polar flagella production gene gene1623 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08335 LI89_08340 LI89_08340 flgE flgE 1868428 1869687 + flagellar hook protein FlgE the hook connects flagellar basal body to the flagellar filament gene gene1624 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08340 LI89_08345 LI89_08345 flgF flgF 1869709 1870464 + flagellar basal body rod protein FlgF FlgF%2C with FlgB and C%2C makes up the proximal portion of the flagellar basal body rod gene gene1625 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08345 LI89_08350 LI89_08350 flgG flgG 1870491 1871273 + flagellar basal body rod protein FlgG makes up the distal portion of the flagellar basal body rod gene gene1626 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08350 LI89_08355 LI89_08355 LI89_08355 1871378 1872094 + flagellar L-ring protein FlgH gene gene1627 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08355 LI89_08360 LI89_08360 flgI flgI 1872106 1873227 + flagellar basal body P-ring biosynthesis protein FlgA part of the basal body which consists of four rings L%2C P%2C S%2C and M mounted on a central rod%3B Vibrio parahaemolyticus%2C Yersinia%2C Bradyrhizobium and other bacteria have two copies of this and other flagellar genes%3B the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum gene gene1628 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08360 LI89_08365 LI89_08365 flgJ flgJ 1873227 1874189 + flagellar rod assembly protein FlgJ Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space gene gene1629 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08365 LI89_08375 LI89_08375 flgK flgK 1874562 1876226 + flagellar hook protein FlgK with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook gene gene1630 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08375 LI89_08380 LI89_08380 flgL flgL 1876340 1877320 + flagellar hook protein FlgL with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook%3B Yersinia%2C Vibrio parahaemolyticus%2C Bradyrhizobium and other organisms have 2 copies of this and other flagellar genes gene gene1631 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08380 LI89_08385 LI89_08385 fliR fliR 1877641 1878423 - flagellar biosynthesis protein FliR FliR%2C with proteins FliP and FliQ%2C forms the core of the central channel in the flagella export apparatus gene gene1632 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08385 LI89_08390 LI89_08390 fliQ fliQ 1878426 1878695 - flagellar biosynthesis protein FliQ with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus gene gene1633 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08390 LI89_08395 LI89_08395 fliP fliP 1878708 1879460 - flagellar biosynthesis protein flip FliP%2C with proteins FliQ and FliR%2C forms the core of the central channel in the flagella export apparatus gene gene1634 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08395 LI89_08400 LI89_08400 LI89_08400 1879457 1880005 - flagellar biosynthesis protein gene gene1635 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08400 LI89_08405 LI89_08405 fliN fliN 1880005 1880421 - flagellar motor switch protein FliN One of three proteins involved in switching the direction of the flagellar rotation gene gene1636 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08405 LI89_08410 LI89_08410 fliM fliM 1880414 1881418 - flagellar motor switch protein FliM with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation gene gene1637 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08410 LI89_08415 LI89_08415 fliL fliL 1881424 1881894 - flagellar basal body-associated protein FliL interacts with cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring gene gene1638 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08415 LI89_08420 LI89_08420 LI89_08420 1882085 1883443 - flagellar hook-length control protein FliK gene gene1639 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08420 LI89_08425 LI89_08425 fliJ fliJ 1883440 1883886 - flagellar biosynthesis chaperone rod/hook and filament chaperone gene gene1640 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08425 LI89_08430 LI89_08430 fliI fliI 1884053 1885417 - ATP synthase involved in type III protein export during flagellum assembly gene gene1641 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08430 LI89_08435 LI89_08435 fliH fliH 1885417 1886139 - flagellar assembly protein H binds to and inhibits the function of flagella specific ATPase FliI gene gene1642 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08435 LI89_08440 LI89_08440 fliG fliG 1886132 1887124 - flagellar motor switch protein G One of three proteins involved in switching the direction of the flagellar rotation gene gene1643 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08440 LI89_08445 LI89_08445 LI89_08445 1887121 1888821 - flagellar M-ring protein FliF gene gene1644 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08445 LI89_08450 LI89_08450 LI89_08450 1889350 1889661 + flagellar hook-basal body protein FliE gene gene1645 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08450 LI89_08455 LI89_08455 LI89_08455 1889658 1890260 - DNA-3-methyladenine glycosidase gene gene1646 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08455 LI89_08460 LI89_08460 LI89_08460 1890347 1893307 - metal-dependent phosphohydrolase gene gene1647 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08460 LI89_08465 LI89_08465 LI89_08465 1893638 1894507 - AraC family transcriptional regulator gene gene1648 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08465 LI89_08470 LI89_08470 LI89_08470 1894781 1895143 - flagellar biosynthesis protein FliT gene gene1649 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08470 LI89_08475 LI89_08475 fliS fliS 1895155 1895553 - flagellar protein FliS flagellin specific chaperone gene gene1650 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08475 LI89_08480 LI89_08480 LI89_08480 1895564 1896964 - flagellar cap protein FliD gene gene1651 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08480 LI89_08485 LI89_08485 LI89_08485 1897228 1898337 + flagellin structural flagella protein gene gene1652 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08485 LI89_08490 LI89_08490 LI89_08490 1898536 1899645 + flagellin structural flagella protein gene gene1653 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08490 LI89_08495 LI89_08495 LI89_08495 1899835 1900959 + flagellin structural flagella protein gene gene1654 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08495 LI89_08500 LI89_08500 LI89_08500 1901149 1902294 + flagellin structural flagella protein gene gene1655 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08500 LI89_08505 LI89_08505 LI89_08505 1902442 1903647 + flagellar protein FliB gene gene1656 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08505 LI89_08510 LI89_08510 fliA fliA 1903838 1904560 + flagellar biosynthesis sigma factor sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this sigma factor directs late flagellar biosynthesis genes gene gene1657 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08510 LI89_08515 LI89_08515 LI89_08515 1904616 1905125 + flagellar biosynthesis protein FliZ gene gene1658 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08515 LI89_08520 LI89_08520 LI89_08520 1905506 1906498 + cysteine desulfhydrase gene gene1659 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08520 LI89_08525 LI89_08525 LI89_08525 1906617 1907417 + cystine transporter subunit gene gene1660 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08525 LI89_08530 LI89_08530 LI89_08530 1907417 1908079 + amino acid ABC transporter permease gene gene1661 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08530 LI89_08535 LI89_08535 LI89_08535 1908082 1908837 + amino acid ABC transporter ATP-binding protein gene gene1662 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08535 LI89_08540 LI89_08540 LI89_08540 1908909 1909280 - transcriptional regulator gene gene1663 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08540 LI89_08545 LI89_08545 LI89_08545 1909280 1909573 - hypothetical protein gene gene1664 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08545 LI89_08550 LI89_08550 putA putA 1909873 1913862 - transcriptional regulator proline utilization protein A%3B multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate%3B in Escherichai coli this protein also self-regulates transcription via a DNA-binding domain at the N-terminus%3B forms dimers and is a peripherally membrane-associated protein gene gene1665 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08550 LI89_08555 LI89_08555 LI89_08555 1914514 1915998 + proline:sodium symporter PutP involved in the sodium dependent uptake of proline gene gene1666 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08555 LI89_08560 LI89_08560 LI89_08560 1916285 1917145 + iron permease gene gene1667 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08560 LI89_08565 LI89_08565 LI89_08565 1917162 1918292 + ferrous iron transporter with EfeUB forms an iron transport system which is silent in E. coli K-12 due to a mutation in EfeU gene gene1668 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08565 LI89_08570 LI89_08570 LI89_08570 1918301 1919605 + peroxidase gene gene1669 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08570 LI89_08575 LI89_08575 LI89_08575 1919649 1920248 - NAD(P)H:quinone oxidoreductase catalyzes the transfer of electrons from NADH to ubiquinone gene gene1670 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08575 LI89_08580 LI89_08580 LI89_08580 1920419 1920901 - DNA-binding protein gene gene1671 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08580 LI89_08585 LI89_08585 LI89_08585 1921235 1922413 + N-acetylneuraminic acid mutarotase gene gene1672 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08585 LI89_08590 LI89_08590 LI89_08590 1922483 1923820 - pyrimidine permease gene gene1673 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08590 LI89_08595 LI89_08595 LI89_08595 1923891 1924439 - FMN reductase gene gene1674 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08595 LI89_08600 LI89_08600 LI89_08600 1924488 1925078 - malonic semialdehyde reductase gene gene1675 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08600 LI89_08605 LI89_08605 LI89_08605 1925090 1925926 - aminoacrylate hydrolase gene gene1676 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08605 LI89_08610 LI89_08610 LI89_08610 1925959 1926345 - aminoacrylate peracid reductase gene gene1677 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08610 LI89_08615 LI89_08615 LI89_08615 1926395 1927183 - amidohydrolase gene gene1678 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08615 LI89_08620 LI89_08620 LI89_08620 1927183 1928286 - pyrimidine monooxygenase gene gene1679 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08620 LI89_08625 LI89_08625 LI89_08625 1928600 1929268 + TetR family transcriptional regulator gene gene1680 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08625 LI89_08630 LI89_08630 LI89_08630 1929326 1930756 - amino acid permease gene gene1681 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08630 LI89_08635 LI89_08635 LI89_08635 1931111 1931186 + tRNA-Lys tRNA gene1682 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08635 LI89_08640 LI89_08640 LI89_08640 1931691 1932014 + hypothetical protein gene gene1683 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08640 LI89_08645 LI89_08645 LI89_08645 1932106 1932621 + hypothetical protein gene gene1684 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08645 LI89_08650 LI89_08650 LI89_08650 1933358 1934092 - SAM-dependent methyltransferase gene gene1685 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08650 LI89_08655 LI89_08655 LI89_08655 1934495 1934992 + hypothetical protein gene gene1686 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08655 LI89_08660 LI89_08660 LI89_08660 1935074 1935403 - hypothetical protein gene gene1687 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08660 LI89_08665 LI89_08665 LI89_08665 1935548 1937047 + cytoplasmic alpha-amylase converts 1%2C4-alpha-D-glucans to maltodextrin gene gene1688 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08665 LI89_08670 LI89_08670 LI89_08670 1937300 1937554 + membrane protein gene gene1689 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08670 LI89_08675 LI89_08675 LI89_08675 1937585 1937923 - membrane protein gene gene1690 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08675 LI89_08680 LI89_08680 LI89_08680 1938035 1938259 - hypothetical protein gene gene1691 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08680 LI89_08685 LI89_08685 sirA sirA 1938953 1939609 + response regulator in Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system%3B in Salmonella SirA and BarA regulate virulence gene expression also via the Csr system gene gene1692 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08685 LI89_08690 LI89_08690 uvrC uvrC 1939602 1941434 + excinuclease ABC subunit C The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision gene gene1693 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08690 LI89_08695 LI89_08695 LI89_08695 1941493 1942041 + CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase gene gene1694 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08695 LI89_08700 LI89_08700 LI89_08700 1942186 1942261 + tRNA-Gly tRNA gene1695 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08700 LI89_08705 LI89_08705 LI89_08705 1942312 1942385 + tRNA-Cys tRNA gene1696 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08705 LI89_08710 LI89_08710 LI89_08710 1942396 1942481 + tRNA-Leu tRNA gene1697 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08710 LI89_08725 LI89_08725 LI89_08725 1943042 1944208 - hypothetical protein gene gene1698 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08725 LI89_08730 LI89_08730 LI89_08730 1944205 1944690 - tail assembly protein gene gene1699 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08730 LI89_08735 LI89_08735 LI89_08735 1944693 1947101 - tail protein gene gene1700 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08735 LI89_08740 LI89_08740 LI89_08740 1947094 1947216 - tail protein gene gene1701 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08740 LI89_08745 LI89_08745 LI89_08745 1947249 1947560 - mu-like prophage FluMu gp41 family protein gene gene1702 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08745 LI89_08750 LI89_08750 LI89_08750 1947613 1948128 - major tail tube protein gene gene1703 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08750 LI89_08755 LI89_08755 LI89_08755 1948142 1949311 - tail sheath protein gene gene1704 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08755 LI89_08760 LI89_08760 LI89_08760 1949437 1949922 - phage tail protein gene gene1705 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08760 LI89_08765 LI89_08765 LI89_08765 1949926 1951089 - variable tail fiber protein gene gene1706 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08765 LI89_08770 LI89_08770 LI89_08770 1951086 1951694 - tail protein gene gene1707 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08770 LI89_08775 LI89_08775 LI89_08775 1951687 1952595 - baseplate assembly protein gene gene1708 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08775 LI89_08780 LI89_08780 LI89_08780 1952600 1952950 - baseplate assembly protein gene gene1709 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08780 LI89_08785 LI89_08785 LI89_08785 1952947 1953588 - baseplate assembly protein gene gene1710 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08785 LI89_08790 LI89_08790 LI89_08790 1953672 1954403 - hypothetical protein gene gene1711 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08790 LI89_08795 LI89_08795 LI89_08795 1954466 1954915 - tail protein gene gene1712 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08795 LI89_08800 LI89_08800 LI89_08800 1954912 1955367 - tail fiber protein gene gene1713 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08800 LI89_08805 LI89_08805 LI89_08805 1955463 1955879 - phage lysis regulatory protein%2C LysB family gene gene1714 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08805 LI89_08810 LI89_08810 LI89_08810 1955881 1956387 - glycoside hydrolase gene gene1715 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08810 LI89_08815 LI89_08815 LI89_08815 1956371 1956580 - primosomal protein gene gene1716 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08815 LI89_08820 LI89_08820 LI89_08820 1956583 1956786 - tail protein X gene gene1717 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08820 LI89_08825 LI89_08825 LI89_08825 1956786 1957259 - head completion/stabilization protein gene gene1718 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08825 LI89_08830 LI89_08830 LI89_08830 1957359 1958018 - hypothetical protein gene gene1719 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08830 LI89_08835 LI89_08835 LI89_08835 1958022 1959251 - capsid protein gpN%3B N protein%3B structural capsid protein%3B bacteriophage P2-like virions include a head and a tail%3B N is the major head protein%3B the mature capsid contains mainly the processed form of the protein N*%2C which lacks 31 amino acids at the N-terminus gene gene1720 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08835 LI89_08840 LI89_08840 LI89_08840 1959328 1960182 - phage capsid scaffolding protein gene gene1721 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08840 LI89_08845 LI89_08845 LI89_08845 1960333 1962105 + oxidoreductase gene gene1722 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08845 LI89_08850 LI89_08850 LI89_08850 1962102 1963139 + Presumed portal vertex protein gene gene1723 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08850 LI89_08855 LI89_08855 LI89_08855 1963252 1963530 + hypothetical protein gene gene1724 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08855 LI89_08860 LI89_08860 LI89_08860 1963578 1963796 - hypothetical protein gene gene1725 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08860 LI89_08865 LI89_08865 LI89_08865 1963937 1964131 - GTP-binding protein gene gene1726 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08865 LI89_08870 LI89_08870 LI89_08870 1964269 1964628 - hypothetical protein gene gene1727 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08870 LI89_08875 LI89_08875 LI89_08875 1964648 1966927 - replication protein gene gene1728 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08875 LI89_08880 LI89_08880 LI89_08880 1966924 1967187 - hypothetical protein gene gene1729 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08880 LI89_08885 LI89_08885 LI89_08885 1967198 1967503 - hypothetical protein gene gene1730 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08885 LI89_08890 LI89_08890 LI89_08890 1967503 1967775 - hypothetical protein gene gene1731 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08890 LI89_08895 LI89_08895 LI89_08895 1967841 1968152 - hypothetical protein gene gene1732 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08895 LI89_08900 LI89_08900 LI89_08900 1968164 1968349 - hypothetical protein gene gene1733 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08900 LI89_08905 LI89_08905 LI89_08905 1968359 1968868 - hypothetical protein gene gene1734 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08905 LI89_08910 LI89_08910 LI89_08910 1968923 1969117 - DNA-binding protein gene gene1735 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08910 LI89_08915 LI89_08915 LI89_08915 1969233 1969802 + Cro/Cl family transcriptional regulator gene gene1736 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08915 LI89_08920 LI89_08920 LI89_08920 1970124 1971158 + integrase gene gene1737 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08920 LI89_08925 LI89_08925 LI89_08925 1971276 1972268 - hypothetical protein gene gene1738 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08925 LI89_08930 LI89_08930 LI89_08930 1972741 1974723 + DNA helicase gene gene1739 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08930 LI89_08935 LI89_08935 LI89_08935 1974720 1975358 + hypothetical protein gene gene1740 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08935 LI89_08940 LI89_08940 LI89_08940 1975884 1976900 - integrase gene gene1741 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08940 LI89_08945 LI89_08945 LI89_08945 1976890 1977126 - hypothetical protein gene gene1742 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08945 LI89_08950 LI89_08950 LI89_08950 1977083 1977289 - hypothetical protein gene gene1743 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08950 LI89_08960 LI89_08960 LI89_08960 1977567 1978067 - siphovirus Gp157 family protein gene gene1744 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08960 LI89_08965 LI89_08965 LI89_08965 1978064 1980262 - transcription termination factor gene gene1745 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08965 LI89_08970 LI89_08970 LI89_08970 1980318 1980653 - hypothetical protein gene gene1746 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08970 LI89_08980 LI89_08980 LI89_08980 1981360 1982010 - repressor gene gene1747 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08980 LI89_08985 LI89_08985 LI89_08985 1982115 1982300 + regulatory protein gene gene1748 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08985 LI89_08990 LI89_08990 LI89_08990 1982361 1982825 + tRNA-(guanine-N1)-methyltransferase gene gene1749 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08990 LI89_08995 LI89_08995 LI89_08995 1982842 1983066 + adenylate cyclase gene gene1750 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_08995 LI89_09000 LI89_09000 LI89_09000 1983069 1984043 + replication protein gene gene1751 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09000 LI89_09005 LI89_09005 LI89_09005 1984040 1985401 + hypothetical protein gene gene1752 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09005 LI89_09010 LI89_09010 LI89_09010 1985446 1985826 + hypothetical protein gene gene1753 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09010 LI89_09015 LI89_09015 LI89_09015 1985831 1986082 + hypothetical protein gene gene1754 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09015 LI89_09020 LI89_09020 LI89_09020 1986079 1986585 + hypothetical protein gene gene1755 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09020 LI89_09025 LI89_09025 LI89_09025 1986774 1988747 + DNA methyltransferase gene gene1756 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09025 LI89_09030 LI89_09030 LI89_09030 1988744 1989097 + hypothetical protein gene gene1757 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09030 LI89_09035 LI89_09035 LI89_09035 1989140 1989403 + hypothetical protein gene gene1758 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09035 LI89_09040 LI89_09040 LI89_09040 1989507 1990100 + bacteriophage protein gene gene1759 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09040 LI89_09045 LI89_09045 LI89_09045 1990109 1990393 + phage protein gene gene1760 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09045 LI89_09050 LI89_09050 LI89_09050 1990390 1990962 + ATP-dependent Zn protease gene gene1761 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09050 LI89_09055 LI89_09055 LI89_09055 1991402 1991668 + lysis protein gene gene1762 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09055 LI89_09060 LI89_09060 LI89_09060 1991668 1992201 + lysozyme gene gene1763 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09060 LI89_09065 LI89_09065 LI89_09065 1992194 1992526 + hypothetical protein gene gene1764 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09065 LI89_09070 LI89_09070 LI89_09070 1992833 1993117 + hypothetical protein gene gene1765 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09070 LI89_09075 LI89_09075 LI89_09075 1993230 1993832 + phage protein gene gene1766 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09075 LI89_09080 LI89_09080 LI89_09080 1993832 1995304 + terminase gene gene1767 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09080 LI89_09085 LI89_09085 LI89_09085 1995315 1996772 + phage protein gene gene1768 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09085 LI89_09090 LI89_09090 LI89_09090 1996720 1997691 + phage head morphogenesis protein gene gene1769 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09090 LI89_09095 LI89_09095 LI89_09095 1997749 1997940 + hypothetical protein gene gene1770 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09095 LI89_09100 LI89_09100 LI89_09100 1998014 1999201 + hypothetical protein gene gene1771 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09100 LI89_09105 LI89_09105 LI89_09105 1999205 1999645 + hypothetical protein gene gene1772 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09105 LI89_09110 LI89_09110 LI89_09110 1999656 2000732 + phage coat protein gene gene1773 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09110 LI89_09115 LI89_09115 LI89_09115 2000742 2001107 + hypothetical protein gene gene1774 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09115 LI89_09120 LI89_09120 LI89_09120 2001110 2001481 + hypothetical protein gene gene1775 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09120 LI89_09125 LI89_09125 LI89_09125 2001513 2001794 + hypothetical protein gene gene1776 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09125 LI89_09130 LI89_09130 LI89_09130 2001791 2002141 + hypothetical protein gene gene1777 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09130 LI89_09135 LI89_09135 LI89_09135 2002143 2002511 + hypothetical protein gene gene1778 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09135 LI89_09140 LI89_09140 LI89_09140 2002508 2002891 + hypothetical protein gene gene1779 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09140 LI89_09145 LI89_09145 LI89_09145 2002916 2003665 + DNA breaking-rejoining protein gene gene1780 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09145 LI89_09150 LI89_09150 LI89_09150 2003825 2004172 + TonB-dependent receptor gene gene1781 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09150 LI89_09155 LI89_09155 LI89_09155 2004384 2004701 + hypothetical protein gene gene1782 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09155 LI89_09165 LI89_09165 LI89_09165 2005111 2005461 + hypothetical protein gene gene1783 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09165 LI89_09170 LI89_09170 LI89_09170 2005527 2005760 + hypothetical protein gene gene1784 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09170 LI89_09175 LI89_09175 LI89_09175 2006383 2007072 + hypothetical protein gene gene1785 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09175 LI89_09180 LI89_09180 LI89_09180 2007065 2010433 + hypothetical protein gene gene1786 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09180 LI89_09185 LI89_09185 LI89_09185 2010446 2010799 + tail protein gene gene1787 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09185 LI89_09190 LI89_09190 LI89_09190 2010813 2011367 - hypothetical protein gene gene1788 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09190 LI89_09195 LI89_09195 LI89_09195 2011495 2012199 + tail protein gene gene1789 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09195 LI89_09200 LI89_09200 LI89_09200 2012196 2012924 + tail protein gene gene1790 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09200 LI89_09205 LI89_09205 LI89_09205 2012867 2013394 + lambda tail assembly I gene gene1791 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09205 LI89_09210 LI89_09210 LI89_09210 2013404 2016544 + hypothetical protein gene gene1792 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09210 LI89_09215 LI89_09215 LI89_09215 2016547 2016813 + hypothetical protein gene gene1793 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09215 LI89_09220 LI89_09220 LI89_09220 2016813 2017517 + phage-like protein gene gene1794 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09220 LI89_09225 LI89_09225 LI89_09225 2017543 2019354 + phage tail protein gene gene1795 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09225 LI89_09230 LI89_09230 LI89_09230 2019360 2019803 + tail assembly protein gene gene1796 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09230 LI89_09235 LI89_09235 LI89_09235 2019862 2022921 - type V secretion protein A gene gene1797 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09235 LI89_09240 LI89_09240 LI89_09240 2023399 2024928 + hypothetical protein gene gene1798 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09240 LI89_09245 LI89_09245 LI89_09245 2025496 2025804 + hypothetical protein gene gene1799 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09245 LI89_09250 LI89_09250 LI89_09250 2025807 2026643 + transposase gene gene1800 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09250 LI89_09255 LI89_09255 LI89_09255 2027334 2028152 - sugar phosphatase gene gene1801 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09255 LI89_09260 LI89_09260 LI89_09260 2028333 2029505 - major facilitator transporter gene gene1802 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09260 LI89_09265 LI89_09265 LI89_09265 2029743 2030768 - ROK family transcriptional regulator gene gene1803 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09265 LI89_09270 LI89_09270 LI89_09270 2030946 2031338 + glyoxalase family protein gene gene1804 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09270 LI89_09275 LI89_09275 LI89_09275 2031593 2032051 + GNAT family acetyltransferase gene gene1805 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09275 LI89_09280 LI89_09280 LI89_09280 2032084 2032437 + MarR family transcriptional regulator gene gene1806 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09280 LI89_09285 LI89_09285 LI89_09285 2032586 2034100 - L-asparagine permease involved in the transporte of L-asparagine gene gene1807 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09285 LI89_09295 LI89_09295 LI89_09295 2035175 2036533 + malate permease gene gene1808 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09295 LI89_09300 LI89_09300 LI89_09300 2036645 2037364 - transcriptional regulator response regulator in two-component regulatory system with DcuS%3B phosphorylated DcuR activates transcription of genes involved in anaerobic fumarate respiration gene gene1809 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09300 LI89_09305 LI89_09305 LI89_09305 2037357 2039033 - histidine kinase C4-dicarboxylate-sensing histidine kinase%3B part of two-component regulatory system with DcuR%3B regulates anaerobic fumarate respiration gene gene1810 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09305 LI89_09310 LI89_09310 LI89_09310 2039277 2040056 - DeoR faimly transcriptional regulator gene gene1811 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09310 LI89_09315 LI89_09315 LI89_09315 2040409 2041671 + membrane protein gene gene1812 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09315 LI89_09320 LI89_09320 LI89_09320 2041668 2042291 + aldolase gene gene1813 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09320 LI89_09325 LI89_09325 LI89_09325 2042294 2043073 + hydroxypyruvate isomerase gene gene1814 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09325 LI89_09330 LI89_09330 LI89_09330 2043514 2044521 + glutaminase catalyzes the formation of glutamate from glutamine gene gene1815 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09330 LI89_09335 LI89_09335 LI89_09335 2044633 2046273 + MFS transporter gene gene1816 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09335 LI89_09340 LI89_09340 LI89_09340 2046406 2046924 - hypothetical protein gene gene1817 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09340 LI89_09345 LI89_09345 LI89_09345 2047098 2049035 + iron permease gene gene1818 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09345 LI89_09350 LI89_09350 LI89_09350 2049116 2049643 + iron transporter gene gene1819 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09350 LI89_09355 LI89_09355 LI89_09355 2049779 2051182 + membrane protein gene gene1820 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09355 LI89_09360 LI89_09360 LI89_09360 2051185 2052477 + ABC transporter permease gene gene1821 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09360 LI89_09365 LI89_09365 LI89_09365 2052467 2053624 + ABC transporter permease gene gene1822 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09365 LI89_09370 LI89_09370 LI89_09370 2053628 2054341 + ABC transporter ATP-binding protein gene gene1823 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09370 LI89_09375 LI89_09375 LI89_09375 2054331 2054819 + thioredoxin gene gene1824 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09375 LI89_09380 LI89_09380 LI89_09380 2054819 2055133 + cytochrome gene gene1825 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09380 LI89_09385 LI89_09385 LI89_09385 2055278 2056147 + tellurite resistance protein TehB with TehA confers resistance to tellurite gene gene1826 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09385 LI89_09390 LI89_09390 LI89_09390 2056198 2057130 - transcriptional regulator gene gene1827 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09390 LI89_09395 LI89_09395 LI89_09395 2057220 2057846 + alanyl-tRNA synthetase gene gene1828 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09395 LI89_09400 LI89_09400 LI89_09400 2058004 2058771 + iron reductase gene gene1829 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09400 LI89_09405 LI89_09405 LI89_09405 2058822 2060039 + peptidase gene gene1830 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09405 LI89_09410 LI89_09410 hmsH hmsH 2060719 2063187 + biofilm formation protein HmsH in Yersinia this protein is important for biofilm formation and hemin adsorption gene gene1831 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09410 LI89_09415 LI89_09415 pgaB pgaB 2063199 2065223 + outer membrane N-deacetylase in Yersinia this protein is involved in biofilm formation and hemin adsorption%3B related protein PgaB in Escherichia coli is an outer membrane N-deacetylase involved in poly-beta-1%2C6-N-acetyl-D-glucosamine (PGA) export gene gene1832 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09415 LI89_09420 LI89_09420 LI89_09420 2065213 2066547 + N-glycosyltransferase predicted polysaccharide polymerase involved in biofilm formation%3B required for the synthesis of the beta-1%2C6-N-acetylglucosamine polysaccharide%3B PgaC%3B in Yersinia the HmsR protein is an inner membrane protein gene gene1833 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09420 LI89_09425 LI89_09425 hmsS hmsS 2066544 2067011 + hemin storage system protein in Yersinia this gene is involved in biofilm formation and hemin adsorption gene gene1834 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09425 LI89_09430 LI89_09430 LI89_09430 2067247 2067954 + acetyltransferase gene gene1835 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09430 LI89_09435 LI89_09435 LI89_09435 2068141 2068425 + hypothetical protein gene gene1836 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09435 LI89_09440 LI89_09440 LI89_09440 2068484 2069272 + hypothetical protein gene gene1837 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09440 LI89_09445 LI89_09445 LI89_09445 2069389 2070498 - calcium/sodium:proton antiporter gene gene1838 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09445 LI89_09450 LI89_09450 LI89_09450 2070719 2071555 - FAD-binding protein gene gene1839 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09450 LI89_09455 LI89_09455 LI89_09455 2071744 2072910 - MFS transporter gene gene1840 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09455 LI89_09460 LI89_09460 cbl cbl 2073278 2074234 + transcriptional regulator Cbl LysR-type transcriptional regulator similar to CysB%3B contains helix-turn-helix (HTH) motif%3B in Escherichia coli this protein regulates two operons consisting of ABC transporters that are part of the cys regulon%3B regulated by CysB%3B DNA-binding transcriptional activator for the ssuEADCB and tauABCD operons gene gene1841 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09460 LI89_09465 LI89_09465 LI89_09465 2074272 2076053 - nitrate/nitrite sensor protein NarX gene gene1842 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09465 LI89_09475 LI89_09475 LI89_09475 2076286 2077293 - ubiquinol oxidase subunit II gene gene1843 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09475 LI89_09480 LI89_09480 LI89_09480 2077296 2078744 - cytochrome D ubiquinol oxidase subunit I gene gene1844 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09480 LI89_09485 LI89_09485 LI89_09485 2078929 2080362 + GntR family transcriptional regulator gene gene1845 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09485 LI89_09490 LI89_09490 LI89_09490 2080971 2082215 + acetylornithine aminotransferase catalyzes the transamination of 2-N-succinylornithine and alpha-ketoglutarate into 2-N-succinylglutamate semialdehyde and glutamate%3B also functions as the catabolic acetylornithine aminotransferase catalyzing the formation of 2-N-acetylglutamate semialdehyde and glutamate from 2-N-acetylornithine and alpha-ketoglutarate gene gene1846 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09490 LI89_09495 LI89_09495 LI89_09495 2082259 2083296 + arginine succinyltransferase gene gene1847 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09495 LI89_09500 LI89_09500 astD astD 2083293 2084774 + succinylglutamate-semialdehyde dehydrogenase a high throughput screen identified this enzyme as an aldehyde dehydrogenase with broad substrate specificity%3B converts succinylglutamate semialdehyde and NAD to succinylglutamate and NADH gene gene1848 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09500 LI89_09505 LI89_09505 LI89_09505 2084817 2086160 + N-succinylarginine dihydrolase gene gene1849 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09505 LI89_09510 LI89_09510 LI89_09510 2086225 2087217 + succinylglutamate desuccinylase gene gene1850 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09510 LI89_09515 LI89_09515 LI89_09515 2087943 2089025 + porin gene gene1851 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09515 LI89_09520 LI89_09520 LI89_09520 2089148 2089957 - N-formylglutamate amidohydrolase gene gene1852 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09520 LI89_09525 LI89_09525 LI89_09525 2089954 2091174 - imidazolonepropionase catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate%2C the third step in the histidine degradation pathway gene gene1853 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09525 LI89_09530 LI89_09530 LI89_09530 2091310 2092077 - GntR family transcriptional regulator gene gene1854 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09530 LI89_09535 LI89_09535 LI89_09535 2092226 2093596 + N-formimino-L-glutamate deiminase catalyzes the deimination of N-formimino-L-glutamate to ammonia and N-formyl-L-glutamate gene gene1855 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09535 LI89_09540 LI89_09540 LI89_09540 2093596 2094168 + HutD family protein gene gene1856 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09540 LI89_09545 LI89_09545 LI89_09545 2094365 2095024 + zinc/cadmium-binding protein gene gene1857 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09545 LI89_09555 LI89_09555 LI89_09555 2095883 2096521 + hypothetical protein gene gene1858 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09555 LI89_09560 LI89_09560 LI89_09560 2096731 2097459 - lipoprotein gene gene1859 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09560 LI89_09565 LI89_09565 kbaY kbaY 2097647 2098525 - tagatose-bisphosphate aldolase catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1%2C6-bisphosphate%3B in enteric bacteria there are two D-tagatose 1%2C6-bisphosphate-specific aldolases: KbaY (also called AgaY)%2C involved in catabolism of N-acetyl-galactosamine and D-galactosamine%2C and GatY which is part of the galactitol catabolism pathway gene gene1860 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09565 LI89_09570 LI89_09570 LI89_09570 2098538 2099692 - aldose isomerase gene gene1861 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09570 LI89_09575 LI89_09575 LI89_09575 2100071 2100505 - PTS N-acetylgalactosamine transporter subunit IIA gene gene1862 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09575 LI89_09580 LI89_09580 LI89_09580 2100521 2101396 - PTS system N-acetylgalactosamine-specific transporter subunit IID catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IID with IIC forms the translocation channel%3B involved in N-acetylgalactosamine transport gene gene1863 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09580 LI89_09585 LI89_09585 LI89_09585 2101386 2102168 - PTS system N-acetylgalactosamine-specific transporter subunit IIC catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake%3Binvolved in N-acetylgalactosamine transport gene gene1864 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09585 LI89_09590 LI89_09590 LI89_09590 2102179 2102652 - PTS system N-acetylgalactosamine-specific transporter subunit IIB catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake%3B involved in N-acetylgalactosamine transport gene gene1865 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09590 LI89_09595 LI89_09595 LI89_09595 2102677 2103969 - tagatose-bisphosphate aldolase with KbaY catalyzes the formation of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate from tagatose-1%2C6-bisphosphate%3B subunit Z may act as a chaperone for the Y subunit gene gene1866 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09595 LI89_09600 LI89_09600 LI89_09600 2104220 2105029 + transcriptional regulator transcriptional repressor for the agaZVWA and agaSYBCDI operons gene gene1867 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09600 LI89_09605 LI89_09605 LI89_09605 2105111 2105755 + hypothetical protein gene gene1868 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09605 LI89_09610 LI89_09610 LI89_09610 2106025 2106663 + beta-fimbriae major subunit gene gene1869 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09610 LI89_09615 LI89_09615 LI89_09615 2106845 2107717 + 23S rRNA pseudouridylate synthase catalyzes the synthesis of pseudouridine from U-2604 in the 23S ribosomal RNA gene gene1870 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09615 LI89_09620 LI89_09620 LI89_09620 2107816 2109027 - sodium:glutamate symporter is involved with the sodium-dependent uptake of glutamate gene gene1871 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09620 LI89_09625 LI89_09625 LI89_09625 2109463 2109657 - hypothetical protein gene gene1872 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09625 LI89_09630 LI89_09630 LI89_09630 2109764 2110609 - membrane protein gene gene1873 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09630 LI89_09635 LI89_09635 LI89_09635 2110843 2111100 + hypothetical protein gene gene1874 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09635 LI89_09640 LI89_09640 LI89_09640 2111262 2112302 + mechanosensitive ion channel protein MscS gene gene1875 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09640 LI89_09645 LI89_09645 LI89_09645 2112484 2113119 + glutathione S-transferase catalyzes the formation of 2%2C4-dinitrophenyl-S-glutathione from 1-chloro-2%2C4-dinitrobenzene and glutathione gene gene1876 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09645 LI89_09650 LI89_09650 LI89_09650 2113180 2113737 + GCN5 family acetyltransferase gene gene1877 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09650 LI89_09655 LI89_09655 LI89_09655 2114247 2114480 + DNA-binding protein gene gene1878 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09655 LI89_09665 LI89_09665 LI89_09665 2115203 2115592 + RNA-binding protein gene gene1879 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09665 LI89_09670 LI89_09670 LI89_09670 2115709 2115951 - hypothetical protein gene gene1880 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09670 LI89_09675 LI89_09675 LI89_09675 2116064 2117773 - diguanylate cyclase gene gene1881 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09675 LI89_09680 LI89_09680 LI89_09680 2117996 2118994 - spore coat protein U gene gene1882 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09680 LI89_09685 LI89_09685 LI89_09685 2119025 2121466 - membrane protein gene gene1883 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09685 LI89_09690 LI89_09690 LI89_09690 2121553 2122302 - molecular chaperone gene gene1884 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09690 LI89_09695 LI89_09695 LI89_09695 2122349 2122906 - spore coat protein U gene gene1885 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09695 LI89_09700 LI89_09700 LI89_09700 2122918 2123475 - spore coat protein U gene gene1886 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09700 LI89_09705 LI89_09705 LI89_09705 2123481 2124017 - spore coat protein U gene gene1887 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09705 LI89_09710 LI89_09710 LI89_09710 2124345 2125769 - MFS transporter gene gene1888 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09710 LI89_09715 LI89_09715 LI89_09715 2125898 2126818 + LysR family transcriptional regulator gene gene1889 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09715 LI89_09720 LI89_09720 LI89_09720 2126831 2129461 - hypothetical protein gene gene1890 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09720 LI89_09725 LI89_09725 LI89_09725 2129430 2130677 - membrane protein gene gene1891 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09725 LI89_09730 LI89_09730 LI89_09730 2130939 2131436 + Free methionine-R-sulfoxide reductase gene gene1892 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09730 LI89_09735 LI89_09735 LI89_09735 2131532 2132260 + prop expression regulator affects solute and DNA transport through an unknown mechanism gene gene1893 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09735 LI89_09740 LI89_09740 LI89_09740 2132280 2134355 + carboxy-terminal protease Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3 gene gene1894 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09740 LI89_09745 LI89_09745 LI89_09745 2134668 2135549 + heat shock protein HtpX metalloprotease gene gene1895 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09745 LI89_09750 LI89_09750 LI89_09750 2135603 2136031 - lipoprotein precursor-like protein gene gene1896 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09750 LI89_09755 LI89_09755 LI89_09755 2136028 2136192 - hypothetical protein gene gene1897 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09755 LI89_09760 LI89_09760 LI89_09760 2136182 2136820 - hypothetical protein gene gene1898 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09760 LI89_09765 LI89_09765 LI89_09765 2137131 2137532 + DNA-binding protein gene gene1899 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09765 LI89_09770 LI89_09770 LI89_09770 2137557 2138924 - multidrug MFS transporter gene gene1900 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09770 LI89_09775 LI89_09775 LI89_09775 2139248 2140414 + oligogalacturonate lyase gene gene1901 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09775 LI89_09780 LI89_09780 LI89_09780 2140601 2141392 + transcriptional regulator regulates the genes involved in 2-keto-3-deoxy gluconate transport and catabolism gene gene1902 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09780 LI89_09785 LI89_09785 LI89_09785 2141667 2142518 + N-acetylmuramoyl-L-alanine amidase gene gene1903 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09785 LI89_09790 LI89_09790 LI89_09790 2142849 2144240 - L-cystine transporter tcyP gene gene1904 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09790 LI89_09795 LI89_09795 LI89_09795 2144459 2145007 - hypothetical protein gene gene1905 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09795 LI89_09800 LI89_09800 LI89_09800 2145365 2146063 - porin gene gene1906 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09800 LI89_09805 LI89_09805 LI89_09805 2146372 2147664 - sugar ABC transporter substrate-binding protein gene gene1907 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09805 LI89_09810 LI89_09810 LI89_09810 2147680 2148807 - sugar ABC transporter ATP-binding protein gene gene1908 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09810 LI89_09815 LI89_09815 LI89_09815 2148821 2149738 - sugar ABC transporter permease gene gene1909 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09815 LI89_09820 LI89_09820 LI89_09820 2149731 2150621 - sugar ABC transporter permease gene gene1910 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09820 LI89_09825 LI89_09825 pectate lyase pectate lyase 2150662 2152329 - disrupted pseudogene gene1911 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09825 LI89_09830 LI89_09830 LI89_09830 2152657 2153418 - 2-deoxy-D-gluconate 3-dehydrogenase catalyzes the formation of 3-dehydro-2-deoxy-D-gluconate from 2-deoxy-D-gluconate gene gene1912 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09830 LI89_09835 LI89_09835 LI89_09835 2153530 2154366 - 5-keto-4-deoxyuronate isomerase 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase%3B catalyzes the interconversion of 4-deoxy-L-threo-5-hexosulose uronate to 3-deoxy-D-glycero-2%2C5-hexodiulosonate gene gene1913 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09835 LI89_09840 LI89_09840 LI89_09840 2154604 2154936 + pectin degradation protein gene gene1914 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09840 LI89_09845 LI89_09845 LI89_09845 2155048 2155713 - 2-deoxyglucose-6-phosphatase YniC%3B catalyzes the dephosphorylation of 2-deoxyglucose 6-phosphate%2C mannose 6-phosphate and p-nitrophenyl phosphate gene gene1915 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09845 LI89_09850 LI89_09850 LI89_09850 2155963 2156517 + membrane protein gene gene1916 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09850 LI89_09855 LI89_09855 LI89_09855 2156726 2157616 + LysR family transcriptional regulator gene gene1917 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09855 LI89_09860 LI89_09860 LI89_09860 2157613 2159094 - acetyl-CoA hydrolase gene gene1918 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09860 LI89_09865 LI89_09865 LI89_09865 2159120 2159905 - methylmalonyl-CoA decarboxylase catalyzes the formation of propanoyl-CoA from methylmalonyl-CoA gene gene1919 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09865 LI89_09870 LI89_09870 LI89_09870 2159919 2160914 - protein kinase gene gene1920 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09870 LI89_09875 LI89_09875 LI89_09875 2160907 2163051 - methylmalonyl-CoA mutase gene gene1921 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09875 LI89_09880 LI89_09880 LI89_09880 2163338 2164207 - hypothetical protein gene gene1922 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09880 LI89_09885 LI89_09885 LI89_09885 2164554 2165447 - iron ABC transporter permease gene gene1923 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09885 LI89_09890 LI89_09890 LI89_09890 2165444 2166328 - membrane protein gene gene1924 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09890 LI89_09895 LI89_09895 LI89_09895 2166328 2167218 - iron ABC transporter permease gene gene1925 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09895 LI89_09900 LI89_09900 LI89_09900 2167215 2168183 - iron-binding protein gene gene1926 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09900 LI89_09905 LI89_09905 LI89_09905 2168395 2169057 + lytic transglycosylase gene gene1927 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09905 LI89_09910 LI89_09910 LI89_09910 2169133 2169816 - hypothetical protein gene gene1928 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09910 LI89_09915 LI89_09915 LI89_09915 2170134 2170385 + hypothetical protein gene gene1929 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09915 LI89_09920 LI89_09920 LI89_09920 2170473 2170811 + steroid delta-isomerase gene gene1930 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09920 LI89_09925 LI89_09925 LI89_09925 2170856 2171092 + Pathogenicity locus gene gene1931 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09925 LI89_09930 LI89_09930 LI89_09930 2171156 2171335 - hypothetical protein gene gene1932 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09930 LI89_09935 LI89_09935 LI89_09935 2171861 2172574 + membrane protein gene gene1933 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09935 LI89_09940 LI89_09940 LI89_09940 2172694 2172906 - hypothetical protein gene gene1934 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09940 LI89_09950 LI89_09950 thrS thrS 2173230 2175158 + threonine--tRNA ligase catalyzes a two-step reaction%2C first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr) gene gene1935 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09950 LI89_09955 LI89_09955 LI89_09955 2175363 2175713 + translation initiation factor IF-3 gene gene1936 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09955 LI89_09960 LI89_09960 LI89_09960 2175810 2176007 + 50S ribosomal protein L35 gene gene1937 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09960 LI89_09965 LI89_09965 rplT rplT 2176045 2176401 + 50S ribosomal protein L20 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit gene gene1938 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09965 LI89_09970 LI89_09970 LI89_09970 2176866 2177849 + phenylalanyl-tRNA synthetase gene gene1939 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09970 LI89_09975 LI89_09975 pheT pheT 2177864 2180251 + phenylalanine--tRNA ligase catalyzes a two-step reaction%2C first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B forms a tetramer of alpha(2)beta(2)%3B binds two magnesium ions per tetramer%3B type 2 subfamily gene gene1940 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09975 LI89_09980 LI89_09980 ihfA ihfA 2180256 2180552 + integration host factor subunit alpha This protein is one of the two subunits of integration host factor%2C a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control gene gene1941 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09980 LI89_09990 LI89_09990 LI89_09990 2181920 2182399 + hypothetical protein gene gene1942 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09990 LI89_09995 LI89_09995 LI89_09995 2182572 2183579 + Vitamin B12 import system permease BtuC gene gene1943 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_09995 LI89_10000 LI89_10000 btuE btuE 2183649 2184203 + glutathione peroxidase similar to glutathione peroxidase%3B member of the btuCED operon which is required for vitamin B12 transport across the inner membrane gene gene1944 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10000 LI89_10005 LI89_10005 LI89_10005 2184228 2184986 + vitamin B12 ABC transporter ATPase gene gene1945 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10005 LI89_10010 LI89_10010 LI89_10010 2185329 2186477 + UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase catalyzes the conversion of UDP-4-keto-arabinose to UDP-4-amino-4-deoxy-L-arabinose gene gene1946 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10010 LI89_10015 LI89_10015 LI89_10015 2186470 2187453 + UDP phosphate 4-deoxy-4-formamido-L-arabinose transferase catalyzes the transfer of 4-deoxy-4-formamido-L-arabinose from UDP to undecaprenyl phosphate gene gene1947 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10015 LI89_10020 LI89_10020 LI89_10020 2187450 2189468 + UDP-4-amino-4-deoxy-L-arabinose formyltransferase Bifunctional polymyxin resistance arnA protein%3B catalyzes the decarboxylation of UDP-glucuronic acid to UDP-4-keto-arabinose and the addition of a formyl group to UDP-4-amino-4-deoxy-L-arabinose to form UDP-L-4-formamido-arabinose%3B active in certain mutant strains gene gene1948 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10020 LI89_10025 LI89_10025 LI89_10025 2189465 2190367 + 4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase catalyzes the formation of 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol from 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol gene gene1949 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10025 LI89_10030 LI89_10030 arnT arnT 2190367 2192031 + 4-amino-4-deoxy-L-arabinose transferase catalyzes the addition of 4-amino-4-deoxy-L-arabinose to lipid A gene gene1950 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10030 LI89_10035 LI89_10035 LI89_10035 2192028 2192372 + 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase gene gene1951 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10035 LI89_10040 LI89_10040 LI89_10040 2192369 2192755 + 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase gene gene1952 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10040 LI89_10045 LI89_10045 LI89_10045 2193018 2193482 + endopeptidase gene gene1953 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10045 LI89_10050 LI89_10050 lplA lplA 2193574 2194590 + lipoate--protein ligase Catalyzes both the ATP-dependent activation of exogenously supplied lipoate to lipoyl-AMP and the transfer of the activated lipoyl on the lipoate-dependent enzymes. Creates an amide linkage that joins the free carboxyl group of lipoic acid to the epsilon-amino group of a specific lysine residue in lipoyl domain of apoproteins gene gene1954 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10050 LI89_10055 LI89_10055 LI89_10055 2194590 2196050 + hypothetical protein gene gene1955 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10055 LI89_10060 LI89_10060 LI89_10060 2196108 2196941 - hemin ABC transporter substrate-binding protein gene gene1956 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10060 LI89_10065 LI89_10065 LI89_10065 2196934 2197995 - hemin transporter gene gene1957 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10065 LI89_10070 LI89_10070 LI89_10070 2198110 2200113 - ligand-gated channel protein gene gene1958 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10070 LI89_10075 LI89_10075 LI89_10075 2200229 2200408 - hemin transporter gene gene1959 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10075 LI89_10080 LI89_10080 LI89_10080 2200665 2201714 - phospho-2-dehydro-3-deoxyheptonate aldolase gene gene1960 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10080 LI89_10085 LI89_10085 LI89_10085 2201940 2202761 - phosphoenolpyruvate synthase regulatory protein gene gene1961 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10085 LI89_10090 LI89_10090 LI89_10090 2203048 2205429 + phosphoenolpyruvate synthase catalyzes the formation of phosphoenolpyruvate from pyruvate gene gene1962 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10090 LI89_10095 LI89_10095 LI89_10095 2205955 2207058 - hypothetical protein YdiK%3B inner membrane protein%3B ydiK promoter presents a PurR sequence%2C suggesting that its expression is purine-regulated%3B unknown function gene gene1963 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10095 LI89_10100 LI89_10100 LI89_10100 2207505 2210561 + membrane protein gene gene1964 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10100 LI89_10105 LI89_10105 LI89_10105 2210613 2211035 + thioesterase required for efficient enterobactin production gene gene1965 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10105 LI89_10110 LI89_10110 sufA sufA 2211534 2211905 + iron-sulfur cluster assembly scaffold protein functions as a scaffold on which iron-sulfur clusters ([2Fe-2S]%3B [4Fe-4S]) are assembled%3B forms a homodimer%3B similar to IscA protein gene gene1966 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10110 LI89_10115 LI89_10115 LI89_10115 2211920 2213431 + cysteine desulfurase with SufCD activates cysteine desulfurase SufS gene gene1967 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10115 LI89_10120 LI89_10120 sufC sufC 2213488 2214234 + cysteine desulfurase part of SUF system involved in inserting iron-sulfur clusters into proteins%3B in Escherichia coli this protein forms a complex with SufBD%3B the SufBCD complex stimulates the cysteine desulfurase SufS in conjunction with SufE gene gene1968 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10120 LI89_10125 LI89_10125 LI89_10125 2214209 2215540 + cysteine desulfurase gene gene1969 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10125 LI89_10130 LI89_10130 LI89_10130 2215573 2216787 + cysteine sulfinate desulfinase gene gene1970 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10130 LI89_10135 LI89_10135 LI89_10135 2216871 2217293 + cysteine desufuration protein SufE Acts with SufS to catalyze the formation of L-alanine from L-cysteine gene gene1971 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10135 LI89_10140 LI89_10140 LI89_10140 2217560 2218627 + peptidoglycan-binding protein gene gene1972 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10140 LI89_10145 LI89_10145 LI89_10145 2218861 2219097 - murein lipoprotein major outer membrane lipoprotein%3B interacts with peptidoglycan to maintain the integrity of the cell envelope gene gene1973 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10145 LI89_10150 LI89_10150 LI89_10150 2219417 2220829 - pyruvate kinase catalyzes the formation of phosphoenolpyruvate from pyruvate gene gene1974 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10150 LI89_10155 LI89_10155 LI89_10155 2221342 2221418 - tRNA-Val tRNA gene1975 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10155 LI89_10160 LI89_10160 LI89_10160 2221461 2221537 - tRNA-Val tRNA gene1976 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10160 LI89_10165 LI89_10165 LI89_10165 2221586 2221662 - tRNA-Val tRNA gene1977 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10165 LI89_10170 LI89_10170 LI89_10170 2221884 2223257 - multidrug transporter NorM%3B MdtK%3B functions as a Na(+)/drug antiporter%3B inactivation in Vibrio cholerae results in susceptibility to fluoroquinolones gene gene1978 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10170 LI89_10175 LI89_10175 LI89_10175 2223559 2224212 + riboflavin synthase subunit alpha catalyzes the formation of riboflavin from 6%2C7-dimethyl-8-(1-D-ribityl)lumazine gene gene1979 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10175 LI89_10180 LI89_10180 LI89_10180 2224272 2225423 - cyclopropane fatty acyl phospholipid synthase catalyzes the transfer of a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge gene gene1980 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10180 LI89_10185 LI89_10185 LI89_10185 2225731 2226948 - transporter uncharacterized member of the major facilitator superfamily (MFS) gene gene1981 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10185 LI89_10190 LI89_10190 LI89_10190 2227112 2228050 + transcriptional regulator gene gene1982 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10190 LI89_10195 LI89_10195 LI89_10195 2228105 2229130 - transcriptional regulator binds to the purF operator and coregulates other genes for de novo purine nucleotide synthesis%3B is involved in regulation of purB%2C purC%2C purEK%2C purHD%2C purL%2C purMN and guaBA expression%3B binds hypoxanthine and guanine as inducers gene gene1983 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10195 LI89_10205 LI89_10205 LI89_10205 2229656 2230234 - superoxide dismutase SodB%3B iron binding%3B present under aerobic and anaerobic conditions%3B destroys free radicals gene gene1984 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10205 LI89_10210 LI89_10210 LI89_10210 2230510 2231400 - hydrolase gene gene1985 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10210 LI89_10215 LI89_10215 LI89_10215 2231834 2232184 + glutaredoxin gene gene1986 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10215 LI89_10220 LI89_10220 LI89_10220 2232272 2232919 - ribonuclease T Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A) gene gene1987 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10220 LI89_10225 LI89_10225 LI89_10225 2233030 2233437 - glyoxalase I Ni-dependent%3B catalyzes the formation of S-lactoylglutathione from methylglyoxal and glutathione gene gene1988 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10225 LI89_10230 LI89_10230 LI89_10230 2233619 2234716 - N-ethylmaleimide reductase FMN-linked%3B catalyzes the formation of N-ethylsuccinimide from N-ethylmaleimide gene gene1989 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10230 LI89_10235 LI89_10235 LI89_10235 2234792 2235394 - transcriptional repressor NemR represses nemA which is involved in degradation of N-ethylmaleimide gene gene1990 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10235 LI89_10240 LI89_10240 LI89_10240 2235515 2237146 - hydrolase gene gene1991 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10240 LI89_10245 LI89_10245 LI89_10245 2237437 2237676 + oxidoreductase gene gene1992 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10245 LI89_10250 LI89_10250 LI89_10250 2237813 2238709 + oxidoreductase gene gene1993 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10250 LI89_10255 LI89_10255 LI89_10255 2238734 2240758 - fusaric acid resistance protein gene gene1994 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10255 LI89_10260 LI89_10260 LI89_10260 2240761 2241618 - membrane protein gene gene1995 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10260 LI89_10265 LI89_10265 LI89_10265 2241625 2241861 - membrane protein gene gene1996 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10265 LI89_10270 LI89_10270 LI89_10270 2242042 2242473 + transcriptional regulator SlyA Transcription regulator that can both activate or repress expression gene gene1997 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10270 LI89_10275 LI89_10275 LI89_10275 2242595 2243062 - membrane protein gene gene1998 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10275 LI89_10280 LI89_10280 anmK anmK 2243507 2244619 + anhydro-N-acetylmuramic acid kinase catalyzes hydrolysis of 1%2C6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate%3B involved in murein recycling gene gene1999 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10280 LI89_10285 LI89_10285 LI89_10285 2244675 2244992 + membrane-bound lysozyme inhibitor of C-type lysozyme gene gene2000 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10285 LI89_10290 LI89_10290 LI89_10290 2245100 2245753 + pyridoxamine 5'-phosphate oxidase catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate gene gene2001 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10290 LI89_10295 LI89_10295 LI89_10295 2245870 2247144 + tyrosyl-tRNA synthetase gene gene2002 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10295 LI89_10300 LI89_10300 LI89_10300 2247219 2248079 + pyridoxamine kinase catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal gene gene2003 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10300 LI89_10305 LI89_10305 LI89_10305 2248131 2248739 - glutathione S-transferase gene gene2004 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10305 LI89_10310 LI89_10310 LI89_10310 2248921 2249184 - hypothetical protein gene gene2005 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10310 LI89_10315 LI89_10315 LI89_10315 2249370 2249957 - membrane protein gene gene2006 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10315 LI89_10320 LI89_10320 LI89_10320 2250182 2250535 + bleomycin resistance protein gene gene2007 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10320 LI89_10325 LI89_10325 hypothetical protein hypothetical protein 2250524 2250742 - disrupted pseudogene gene2008 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10325 LI89_10330 LI89_10330 tppB tppB 2250789 2252312 - peptide ABC transporter permease mutations in this gene confer resistance to the toxic peptide alafosfalin in Salmonella typhimurium%3B member of proton-dependent oligopeptide transport (POT) system family%3B in Escherichia coli this gene is regulated by OmpR although not via osmoregulation gene gene2009 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10330 LI89_10335 LI89_10335 LI89_10335 2252852 2253757 + LysR family transcriptional regulator gene gene2010 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10335 LI89_10340 LI89_10340 LI89_10340 2253779 2254990 - hypothetical protein gene gene2011 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10340 LI89_10345 LI89_10345 LI89_10345 2255002 2255226 - hypothetical protein gene gene2012 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10345 LI89_10350 LI89_10350 LI89_10350 2255523 2256338 - peptide ABC transporter ATP-binding protein gene gene2013 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10350 LI89_10355 LI89_10355 LI89_10355 2256338 2257330 - peptide ABC transporter ATP-binding protein involved in resistance to antimibial peptides gene gene2014 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10355 LI89_10360 LI89_10360 LI89_10360 2257330 2258220 - peptide ABC transporter permease gene gene2015 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10360 LI89_10365 LI89_10365 LI89_10365 2258207 2259172 - peptide ABC transporter permease gene gene2016 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10365 LI89_10375 LI89_10375 LI89_10375 2261450 2262223 + enterotoxin gene gene2017 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10375 LI89_10380 LI89_10380 LI89_10380 2262263 2262610 + hypothetical protein gene gene2018 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10380 LI89_10385 LI89_10385 pspF pspF 2262654 2263664 - phage shock protein transcriptional activator for pspABCE which are induced in response to phage proteins%2C membrane altering stresses%2C and impaired proton expor gene gene2019 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10385 LI89_10390 LI89_10390 LI89_10390 2263855 2264520 + phage shock protein involved in maintaining membrane potential under membrane stress conditions%3B also acts as a negative transcriptional regulator of the phage shock protein (psp) operon(pspABCDE) by regulating the transcriptional activator PspF gene gene2020 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10390 LI89_10395 LI89_10395 pspB pspB 2264749 2264976 + phage shock protein DNA-binding transcriptional regulator%3B acts together with PspC to induce psp operon during infection with phage%2C exposure to ethanol or osmotic shock%3B forms a complex with PspA and C%3B PspC is required for PspAB binding gene gene2021 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10395 LI89_10400 LI89_10400 LI89_10400 2265030 2265380 + transcriptional regulator with PsbB forms toxin/antitoxin pair%3B activates the psp operon in response to phage infection%2C exposure to ethanol or osmotic shock gene gene2022 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10400 LI89_10405 LI89_10405 LI89_10405 2265426 2265665 + phage-shock protein gene gene2023 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10405 LI89_10410 LI89_10410 LI89_10410 2265646 2267043 + hypothetical protein gene gene2024 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10410 LI89_10415 LI89_10415 LI89_10415 2267040 2268104 + hypothetical protein gene gene2025 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10415 LI89_10420 LI89_10420 LI89_10420 2268107 2268565 - RES domain protein gene gene2026 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10420 LI89_10425 LI89_10425 LI89_10425 2268621 2269067 - toxin-antitoxin system antitoxin component gene gene2027 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10425 LI89_10430 LI89_10430 LI89_10430 2269387 2270970 + transcriptional regulator regulates genes involved in the biosynthesis and transport of aromatic amino acids gene gene2028 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10430 LI89_10435 LI89_10435 tpx tpx 2271054 2271557 - peroxidase antioxidant activity%3B thioredoxin-dependent thiol peroxidase%3B forms homodimers in solution%3B shows substrate specificity to alkyl hydroperoxides%3B periplasmic protein gene gene2029 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10435 LI89_10440 LI89_10440 LI89_10440 2271710 2272681 + L-alanine-DL-glutamate epimerase catalyzes the epimerization of L-alanyl-D-glutamate to L-alanyl-L-glutamate gene gene2030 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10440 LI89_10445 LI89_10445 LI89_10445 2272678 2273385 - murein peptide amidase A gene gene2031 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10445 LI89_10450 LI89_10450 LI89_10450 2273532 2275148 + peptide ABC transporter substrate-binding protein is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate gene gene2032 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10450 LI89_10455 LI89_10455 LI89_10455 2275252 2275485 + hypothetical protein gene gene2033 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10455 LI89_10460 LI89_10460 LI89_10460 2275567 2275755 - hypothetical protein gene gene2034 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10460 LI89_10465 LI89_10465 zntB zntB 2276060 2277043 + zinc transporter gene gene2035 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10465 LI89_10470 LI89_10470 LI89_10470 2277358 2278299 - tRNA 2-thiocytidine biosynthesis protein TtcA TtcA%3B YdaO%3B catalyzes the thiolation of cytosine 32 in specific tRNAs%3B forms 2-thiocytidine (s(2)C) gene gene2036 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10470 LI89_10475 LI89_10475 LI89_10475 2278608 2279441 + transcription antiterminator LicT gene gene2037 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10475 LI89_10480 LI89_10480 LI89_10480 2279527 2281428 + PTS beta-glucoside transporter subunit IIABC gene gene2038 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10480 LI89_10485 LI89_10485 LI89_10485 2281449 2282921 + beta-glucosidase gene gene2039 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10485 LI89_10490 LI89_10490 LI89_10490 2283152 2286685 - pyruvate-flavodoxin oxidoreductase gene gene2040 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10490 LI89_10495 LI89_10495 LI89_10495 2287064 2287396 + multidrug DMT transporter gene gene2041 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10495 LI89_10500 LI89_10500 LI89_10500 2287542 2288201 - methyltransferase gene gene2042 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10500 LI89_10505 LI89_10505 LI89_10505 2288442 2288759 + lipoprotein gene gene2043 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10505 LI89_10510 LI89_10510 LI89_10510 2289021 2290013 - lactate dehydrogenase fermentative%3B catalyzes the formationof pyruvate from lactate gene gene2044 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10510 LI89_10515 LI89_10515 LI89_10515 2290287 2292920 + hypothetical protein gene gene2045 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10515 LI89_10520 LI89_10520 LI89_10520 2292917 2293111 + hypothetical protein gene gene2046 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10520 LI89_10525 LI89_10525 LI89_10525 2293121 2293492 + hypothetical protein gene gene2047 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10525 LI89_10530 LI89_10530 LI89_10530 2293591 2294904 - cytochrome C biogenesis protein CcdA gene gene2048 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10530 LI89_10535 LI89_10535 LI89_10535 2295003 2296475 - xylulose kinase catalyzes the formation of D-xylulose-5-phosphate fro D-xylulose gene gene2049 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10535 LI89_10540 LI89_10540 LI89_10540 2296495 2297886 - D-arabinitol 4-dehydrogenase gene gene2050 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10540 LI89_10545 LI89_10545 LI89_10545 2298096 2299040 + DeoR faimly transcriptional regulator gene gene2051 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10545 LI89_10550 LI89_10550 LI89_10550 2299209 2299814 - FMN-dependent NADH-azoreductase FMN-dependent%3B requires NADH%3B catalyzes the cleavage of azo bond in aromatic azo compounds gene gene2052 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10550 LI89_10555 LI89_10555 LI89_10555 2300211 2304053 + ATP-dependent helicase HrpA involved in the post-transcriptional processing of the daa operon mRNA%2C which encodes proteins involved in fimbrial biogenesis of an enteropathogenic E. coli strain gene gene2053 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10555 LI89_10560 LI89_10560 LI89_10560 2304392 2304721 + hypothetical protein gene gene2054 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10560 LI89_10565 LI89_10565 LI89_10565 2304718 2305041 + DNA-binding protein gene gene2055 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10565 LI89_10570 LI89_10570 LI89_10570 2305096 2305938 - serine protease gene gene2056 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10570 LI89_10580 LI89_10580 LI89_10580 2306338 2306610 - acid-shock protein gene gene2057 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10580 LI89_10585 LI89_10585 LI89_10585 2306999 2308480 - peptidase M32 gene gene2058 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10585 LI89_10590 LI89_10590 LI89_10590 2308632 2309945 - sensor protein RstB gene gene2059 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10590 LI89_10595 LI89_10595 LI89_10595 2309942 2310670 - transcriptional regulator response regulator in two-component regulatory system with RstB gene gene2060 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10595 LI89_10600 LI89_10600 LI89_10600 2310913 2311329 + hypothetical protein gene gene2061 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10600 LI89_10605 LI89_10605 LI89_10605 2311388 2312779 - arginine:ornithine antiporter gene gene2062 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10605 LI89_10610 LI89_10610 LI89_10610 2313042 2313995 - hypothetical protein gene gene2063 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10610 LI89_10615 LI89_10615 LI89_10615 2314257 2314436 + hypothetical protein gene gene2064 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10615 LI89_10620 LI89_10620 pntA pntA 2314528 2316054 + NAD(P) transhydrogenase subunit alpha forms a tetramer composed of 2 alpha subunits and 2 beta subunits in the inner membrane%3B involved in catalyzing transfer of hydride ion equivalents between NAD and NADP%3B stereospecific (AB-specific)%3B functions as a proton pump by translocating protons from cytoplasm to periplasm gene gene2065 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10620 LI89_10625 LI89_10625 pntB pntB 2316175 2317566 + pyridine nucleotide transhydrogenase catalyzes reversible transfer of hydride ion equivalent between NAD and NADP%3B membrane-bound proton pump that translocates protons from cytosolic to periplasmic side of the inner membrane%3B forms a tetramer composed of two alpha and 2 beta subunits%3B AB-stereospecific enzyme gene gene2066 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10625 LI89_10630 LI89_10630 LI89_10630 2317830 2318786 - universal stress protein UspE with UspC and UspD is involved in resistance to UV irradiation gene gene2067 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10630 LI89_10635 LI89_10635 LI89_10635 2319023 2319778 - transcriptional regulator Global transcription factor that controls the expression of over 100 target genes in response to anoxia gene gene2068 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10635 LI89_10640 LI89_10640 LI89_10640 2319851 2320369 - cysteine methyltransferase gene gene2069 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10640 LI89_10645 LI89_10645 LI89_10645 2320620 2321408 + N-formylglutamate amidohydrolase gene gene2070 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10645 LI89_10650 LI89_10650 LI89_10650 2321566 2322084 + hypothetical protein gene gene2071 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10650 LI89_10655 LI89_10655 LI89_10655 2322181 2322654 + 2-hydroxyacid dehydrogenase gene gene2072 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10655 LI89_10660 LI89_10660 LI89_10660 2322715 2323677 - transcriptional regulator gene gene2073 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10660 LI89_10665 LI89_10665 LI89_10665 2323834 2324574 + 3-ketoacyl-ACP reductase gene gene2074 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10665 LI89_10670 LI89_10670 LI89_10670 2324753 2326183 + alkaline phosphatase gene gene2075 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10670 LI89_10675 LI89_10675 LI89_10675 2326464 2327393 + ribokinase gene gene2076 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10675 LI89_10680 LI89_10680 LI89_10680 2327395 2328726 + sugar:proton symporter gene gene2077 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10680 LI89_10685 LI89_10685 LI89_10685 2328748 2329761 + deoxyribose mutarotase gene gene2078 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10685 LI89_10690 LI89_10690 LI89_10690 2329822 2330601 - arpA protein gene gene2079 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10690 LI89_10695 LI89_10695 LI89_10695 2331021 2333396 + hypothetical protein gene gene2080 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10695 LI89_10700 LI89_10700 LI89_10700 2333489 2334163 + dUMP phosphatase manganese-dependent 5'-nucleotidase%3B specific for 5'-UMP%2C 5'-dUMP%2C and 5'-dTMP%3B member of haloacid dehalogenase (HAD)-like hydrolase superfamily gene gene2081 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10700 LI89_10705 LI89_10705 LI89_10705 2334279 2334584 - acetolactate synthase 1 regulatory subunit with IlvB catalyzes the formation of 2-acetolactate from pyruvate%2C the small subunit is required for full activity and valine sensitivity%3B E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates%2C valine sensitivity and affinity for cofactors%3B also known as acetolactate synthase small subunit gene gene2082 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10705 LI89_10710 LI89_10710 LI89_10710 2334586 2336253 - acetolactate synthase catalytic subunit gene gene2083 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10710 LI89_10715 LI89_10715 LI89_10715 2336711 2339155 - virulence factor gene gene2084 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10715 LI89_10720 LI89_10720 LI89_10720 2339152 2342190 - virulence factor SrfB gene gene2085 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10720 LI89_10725 LI89_10725 LI89_10725 2342195 2343538 - virulence factor gene gene2086 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10725 LI89_10730 LI89_10730 LI89_10730 2343892 2345250 - membrane protein gene gene2087 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10730 LI89_10735 LI89_10735 LI89_10735 2345464 2346276 - inositol monophosphatase gene gene2088 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10735 LI89_10740 LI89_10740 LI89_10740 2346416 2347411 - LacI family transcriptional regulator gene gene2089 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10740 LI89_10745 LI89_10745 LI89_10745 2347560 2349020 + AMP nucleosidase Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile gene gene2090 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10745 LI89_10750 LI89_10750 LI89_10750 2349066 2349920 - LysR family transcriptional regulator gene gene2091 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10750 LI89_10755 LI89_10755 LI89_10755 2350034 2351023 + acyltransferase gene gene2092 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10755 LI89_10765 LI89_10765 LI89_10765 2351412 2352170 + amidinotransferase gene gene2093 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10765 LI89_10770 LI89_10770 LI89_10770 2352197 2352970 + ABC transporter substrate-binding protein gene gene2094 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10770 LI89_10775 LI89_10775 LI89_10775 2353050 2353745 + ABC transporter gene gene2095 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10775 LI89_10780 LI89_10780 LI89_10780 2353742 2354464 + polar amino acid ABC transporter permease gene gene2096 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10780 LI89_10785 LI89_10785 LI89_10785 2354485 2354940 - AsnC family transcriptional regulator gene gene2097 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10785 LI89_10790 LI89_10790 LI89_10790 2354955 2356064 + succinylglutamate desuccinylase gene gene2098 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10790 LI89_10795 LI89_10795 LI89_10795 2356068 2357201 - NADH:flavorubredoxin oxidoreductase gene gene2099 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10795 LI89_10800 LI89_10800 LI89_10800 2357213 2358649 - nitric oxide reductase detoxifies nitric oxide using NADH gene gene2100 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10800 LI89_10805 LI89_10805 LI89_10805 2358812 2360353 + transcriptional regulator Required for the expression of anaerobic nitric oxide (NO) reductase%3B acts as a transcriptional activator for the norVW operon gene gene2101 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10805 LI89_10810 LI89_10810 LI89_10810 2360456 2360959 + transcriptional regulator gene gene2102 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10810 LI89_10815 LI89_10815 LI89_10815 2361220 2362335 + membrane protein gene gene2103 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10815 LI89_10820 LI89_10820 LI89_10820 2362319 2363479 + multidrug ABC transporter permease gene gene2104 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10820 LI89_10825 LI89_10825 LI89_10825 2363529 2364380 - S-transferase YghU%3B B2989%3B one of eight putative glutathione transferase proteins from E. coli gene gene2105 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10825 LI89_10830 LI89_10830 LI89_10830 2364542 2365888 + glycerophosphodiester phosphodiesterase gene gene2106 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10830 LI89_10835 LI89_10835 LI89_10835 2365943 2367118 - DNA repair protein gene gene2107 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10835 LI89_10840 LI89_10840 LI89_10840 2367608 2368870 + membrane protein gene gene2108 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10840 LI89_10845 LI89_10845 LI89_10845 2368974 2369672 - LuxR family transcriptional regulator gene gene2109 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10845 LI89_10850 LI89_10850 LI89_10850 2370005 2370190 + antitoxin gene gene2110 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10850 LI89_10855 LI89_10855 LI89_10855 2370906 2371184 + hypothetical protein gene gene2111 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10855 LI89_10860 LI89_10860 LI89_10860 2371448 2372860 + major facilitator transporter gene gene2112 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10860 LI89_10865 LI89_10865 LI89_10865 2372946 2373695 + malonic semialdehyde reductase NADP(+)-dependent%3B catalyzes the formation of 3-hydroxypropionate from the toxic malonic semialdehyde%2C catalyzes the formation of 2-aminomalonate-semialdehyde from L-serine%3B can also use 3-hydroxybutyrate%2C 3-hydroxy-isobutyrate%2C D-threonine%2C L-allo-threonine%2CD-serine gene gene2113 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10865 LI89_10870 LI89_10870 LI89_10870 2373726 2374052 - membrane protein gene gene2114 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10870 LI89_10880 LI89_10880 LI89_10880 2374303 2375664 - peptidase gene gene2115 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10880 LI89_10885 LI89_10885 LI89_10885 2375856 2376227 + hypothetical protein gene gene2116 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10885 LI89_10890 LI89_10890 LI89_10890 2376319 2376564 + membrane protein gene gene2117 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10890 LI89_10895 LI89_10895 LI89_10895 2376665 2376946 - hypothetical protein gene gene2118 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10895 LI89_10900 LI89_10900 LI89_10900 2377225 2378505 + voltage-gated chloride channel protein ClcB gene gene2119 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10900 LI89_10905 LI89_10905 LI89_10905 2378526 2379194 - dethiobiotin synthetase DTB synthetase%3B dethiobiotin synthase%3B involved in production of dethiobiotin from ATP and 7%2C8-diaminononanoate and carbon dioxide%3B contains magnesium gene gene2120 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10905 LI89_10910 LI89_10910 LI89_10910 2379417 2380634 - transcriptional regulator mlc%2C controls the expression of genes involved in the phosphotransferase and phosphoenolpyruvate systems%2C regulates genes involved in the uptake of sugars gene gene2121 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10910 LI89_10915 LI89_10915 LI89_10915 2380855 2381766 - LysR family transcriptional regulator gene gene2122 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10915 LI89_10920 LI89_10920 LI89_10920 2381943 2383235 + membrane protein gene gene2123 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10920 LI89_10925 LI89_10925 LI89_10925 2383422 2383811 + membrane protein gene gene2124 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10925 LI89_10930 LI89_10930 LI89_10930 2383997 2384881 + beta-lactamase gene gene2125 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10930 LI89_10935 LI89_10935 LI89_10935 2385044 2385973 + DNA replication terminus site-binding protein binds to DNA replication terminator sequences to prevent passage of replication forks gene gene2126 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10935 LI89_10940 LI89_10940 LI89_10940 2386058 2386777 - LuxR family transcriptional regulator gene gene2127 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10940 LI89_10945 LI89_10945 fumC fumC 2387138 2388532 - fumarate hydratase class II family (does not require metal)%3B tetrameric enzyme%3B fumarase C%3B reversibly converts (S)-malate to fumarate and water%3B functions in the TCA cycle gene gene2128 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10945 LI89_10950 LI89_10950 LI89_10950 2388757 2389932 + mannose-6-phosphate isomerase catalyzes the formation of of fructose 6-phosphate from mannose 6-phosphate gene gene2129 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10950 LI89_10955 LI89_10955 LI89_10955 2390164 2391699 + GTP-binding protein YdgA gene gene2130 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10955 LI89_10960 LI89_10960 LI89_10960 2391770 2392435 + chloramphenicol acetyltransferase gene gene2131 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10960 LI89_10965 LI89_10965 LI89_10965 2392436 2393467 - transcriptional regulator regulates malXY which are involved in maltose-glucose transport gene gene2132 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10965 LI89_10970 LI89_10970 LI89_10970 2393663 2395273 + bifunctional PTS system maltose and glucose-specific transporter subunits IICB phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS)%3B catalyzes the phosphorylation of maltose and glucose concomitant with their translocation across the cell membrane%3B component IIB catalyzes the phosphorylation of the sugar molecule%3B IIC forms the translocation channel and contains the substrate specific binding site gene gene2133 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10970 LI89_10975 LI89_10975 LI89_10975 2395410 2396588 + bifunctional beta-cystathionase/maltose regulon regulatory protein catalyzes the formation of homocysteine and pyruvate from cystathionine%3B also acts a a negative regulator for the mal regulon but interacting with the transcriptional activator MalT gene gene2134 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10975 LI89_10980 LI89_10980 LI89_10980 2396743 2397741 + adenosine deaminase gene gene2135 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10980 LI89_10985 LI89_10985 LI89_10985 2398097 2399110 - hypothetical protein gene gene2136 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10985 LI89_10990 LI89_10990 LI89_10990 2399282 2400331 - oxidoreductase gene gene2137 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10990 LI89_10995 LI89_10995 LI89_10995 2400433 2401365 - transcriptional regulator positive and negative regulator%3B regulates the araBAD and araFGH operons and other genes involved in the transport and catabolism of L-arabinose gene gene2138 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_10995 LI89_11000 LI89_11000 araH araH 2401502 2402530 - L-arabinose transporter permease Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose gene gene2139 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11000 LI89_11005 LI89_11005 araG araG 2402563 2404134 - L-arabinose transporter ATP-binding protein Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose gene gene2140 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11005 LI89_11010 LI89_11010 LI89_11010 2404213 2405196 - sugar ABC transporter substrate-binding protein with AraGH is involved in the transport of arabinose into the cell gene gene2141 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11010 LI89_11015 LI89_11015 LI89_11015 2405648 2407363 + ribulokinase catalyzes the phosphorylation of ribulose to ribulose 5-phosphate gene gene2142 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11015 LI89_11020 LI89_11020 LI89_11020 2407421 2408923 + arabinose isomerase gene gene2143 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11020 LI89_11025 LI89_11025 LI89_11025 2409156 2411288 - peptidase C39 gene gene2144 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11025 LI89_11030 LI89_11030 LI89_11030 2411291 2412685 - hemolysin D gene gene2145 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11030 LI89_11035 LI89_11035 peptidase C39 peptidase C39 2412682 2414809 - disrupted pseudogene gene2146 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11035 LI89_11045 LI89_11045 LI89_11045 2415188 2416945 + formate--tetrahydrofolate ligase catalyzes the formation of 10-formyltetrahydrofolate from formate and tetrahydrofolate gene gene2147 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11045 LI89_11050 LI89_11050 LI89_11050 2417013 2417456 + membrane protein gene gene2148 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11050 LI89_11060 LI89_11060 LI89_11060 2417806 2418387 + electron transporter RsxA gene gene2149 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11060 LI89_11065 LI89_11065 LI89_11065 2418387 2419010 + electron transporter RnfB part of membrane-bound complex thought to be involved in electron transport to nitrogen gene gene2150 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11065 LI89_11070 LI89_11070 LI89_11070 2419003 2421207 + electron transporter RnfC gene gene2151 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11070 LI89_11075 LI89_11075 LI89_11075 2421249 2422136 - AraC family transcriptional regulator gene gene2152 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11075 LI89_11080 LI89_11080 LI89_11080 2422624 2423718 + electron transporter RnfD gene gene2153 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11080 LI89_11085 LI89_11085 LI89_11085 2423728 2424357 + electron transporter RnfG part of membrane-bound complex hought to be involved in electron transport to nitrogen gene gene2154 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11085 LI89_11090 LI89_11090 LI89_11090 2424354 2425055 + elongation factor G gene gene2155 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11090 LI89_11095 LI89_11095 LI89_11095 2425052 2425693 + endonuclease III DNA-(apurinic or apyrimidinic site) lyase%3B has apurinic or apyrimidinic endonuclease activity and DNA N-glycosylase activity%3B removed damaged DNA at cytosines%2C thymines and guanines gene gene2156 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11095 LI89_11100 LI89_11100 LI89_11100 2425780 2426817 - hypothetical protein gene gene2157 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11100 LI89_11105 LI89_11105 LI89_11105 2426861 2428096 - XaxA gene gene2158 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11105 LI89_11110 LI89_11110 LI89_11110 2428634 2430955 + CbbBc protein gene gene2159 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11110 LI89_11115 LI89_11115 LI89_11115 2431138 2433072 + exoribonuclease II Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction gene gene2160 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11115 LI89_11120 LI89_11120 LI89_11120 2433378 2435444 + carbon starvation protein A gene gene2161 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11120 LI89_11125 LI89_11125 LI89_11125 2435437 2435769 + hypothetical protein gene gene2162 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11125 LI89_11130 LI89_11130 LI89_11130 2435859 2436524 - fructose-6-phosphate aldolase similar to transaldolase from Escherichia coli%3B many organisms have multiple copies gene gene2163 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11130 LI89_11135 LI89_11135 LI89_11135 2436720 2437466 + DeoR faimly transcriptional regulator gene gene2164 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11135 LI89_11140 LI89_11140 LI89_11140 2437486 2437734 + hypothetical protein gene gene2165 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11140 LI89_11145 LI89_11145 araD araD 2437761 2438456 - ribulose 5-phosphate epimerase catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate%3B links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source gene gene2166 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11145 LI89_11150 LI89_11150 LI89_11150 2438892 2439107 + lipoprotein gene gene2167 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11150 LI89_11155 LI89_11155 LI89_11155 2439432 2439758 - translation initiation factor Sui1 involved in start site selection during the initiation of translation gene gene2168 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11155 LI89_11160 LI89_11160 LI89_11160 2439755 2440495 - orotidine 5'-phosphate decarboxylase gene gene2169 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11160 LI89_11170 LI89_11170 LI89_11170 2440846 2441106 + membrane protein gene gene2170 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11170 LI89_11175 LI89_11175 LI89_11175 2441180 2442382 - membrane protein gene gene2171 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11175 LI89_11180 LI89_11180 LI89_11180 2442555 2443121 + DNA-binding protein gene gene2172 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11180 LI89_11185 LI89_11185 LI89_11185 2443328 2443615 + regulatory protein gene gene2173 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11185 LI89_11190 LI89_11190 LI89_11190 2443672 2444841 - tetratricopeptide repeat protein gene gene2174 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11190 LI89_11195 LI89_11195 LI89_11195 2444848 2445159 - membrane protein gene gene2175 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11195 LI89_11200 LI89_11200 LI89_11200 2445355 2446116 - phosphatidylglycerophosphatase gene gene2176 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11200 LI89_11205 LI89_11205 ribA ribA 2446580 2447170 + GTP cyclohydrolase catalyzes the conversion of GTP to formate and 2%2C5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and diphosphate gene gene2177 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11205 LI89_11210 LI89_11210 LI89_11210 2447335 2450007 - aconitate hydratase Catalyzes the conversion of citrate to isocitrate gene gene2178 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11210 LI89_11215 LI89_11215 LI89_11215 2450151 2451011 - hypothetical protein gene gene2179 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11215 LI89_11220 LI89_11220 LI89_11220 2451269 2451517 + hypothetical protein gene gene2180 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11220 LI89_11225 LI89_11225 LI89_11225 2451653 2452822 + hypothetical protein gene gene2181 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11225 LI89_11235 LI89_11235 LI89_11235 2453154 2454971 - hypothetical protein gene gene2182 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11235 LI89_11240 LI89_11240 LI89_11240 2455055 2455249 - hypothetical protein gene gene2183 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11240 LI89_11245 LI89_11245 LI89_11245 2455389 2456441 - hypothetical protein gene gene2184 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11245 LI89_11250 LI89_11250 LI89_11250 2456516 2456854 - hypothetical protein gene gene2185 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11250 LI89_11255 LI89_11255 LI89_11255 2456867 2457112 - hypothetical protein gene gene2186 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11255 LI89_11260 LI89_11260 LI89_11260 2457687 2457971 - hypothetical protein gene gene2187 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11260 LI89_11270 LI89_11270 LI89_11270 2458713 2459444 - hypothetical protein gene gene2188 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11270 LI89_11280 LI89_11280 LI89_11280 2459589 2459801 - hypothetical protein gene gene2189 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11280 LI89_11285 LI89_11285 LI89_11285 2461022 2461651 - hypothetical protein gene gene2190 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11285 LI89_11290 LI89_11290 LI89_11290 2462109 2462651 + resolvase gene gene2191 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11290 LI89_11295 LI89_11295 LI89_11295 2462916 2463758 - hypothetical protein gene gene2192 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11295 LI89_11300 LI89_11300 cysB cysB 2463886 2464860 - CysB family transcriptional regulator LysR-type transcriptional regulator%3B contains helix-turn-helix (HTH) motif%3B in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon%3B autoregulates expression%3B crystal structure of Klebsiella aerogenes showed tetramer formation gene gene2193 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11300 LI89_11305 LI89_11305 LI89_11305 2465225 2467840 - DNA topoisomerase I catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining%2C maintains net negative superhelicity gene gene2194 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11305 LI89_11310 LI89_11310 LI89_11310 2468281 2468532 + hypothetical protein gene gene2195 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11310 LI89_11315 LI89_11315 LI89_11315 2468635 2469681 - peptidase multicopy suppressor of htrA(degP) gene gene2196 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11315 LI89_11320 LI89_11320 LI89_11320 2469853 2470614 + 3-oxoacyl-ACP reductase gene gene2197 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11320 LI89_11325 LI89_11325 LI89_11325 2470626 2471216 + cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase catalyzes the formation of adenosylcobalamide from cobinamide and the formation of coenzyme B12 from cob(I)alamin gene gene2198 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11325 LI89_11330 LI89_11330 LI89_11330 2471341 2471535 - hypothetical protein gene gene2199 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11330 LI89_11335 LI89_11335 LI89_11335 2471819 2472868 - ribosomal large subunit pseudouridine synthase B gene gene2200 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11335 LI89_11340 LI89_11340 LI89_11340 2473107 2473727 - hypothetical protein gene gene2201 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11340 LI89_11345 LI89_11345 LI89_11345 2473756 2474706 - S-adenosylmethionine tRNA ribosyltransferase gene gene2202 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11345 LI89_11350 LI89_11350 LI89_11350 2475142 2476704 + anthranilate synthase component I with component II%2C the glutamine amidotransferase%2C catalyzes the formation of anthranilate from chorismate and glutamine gene gene2203 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11350 LI89_11355 LI89_11355 LI89_11355 2476719 2477309 + anthranilate synthase subunit II gene gene2204 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11355 LI89_11360 LI89_11360 LI89_11360 2477370 2478386 + Anthranilate phosphoribosyltransferase gene gene2205 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11360 LI89_11365 LI89_11365 LI89_11365 2478390 2479751 + indole-3-glycerol phosphate synthase monomeric bifunctional protein%3B functions in tryptophan biosynthesis pathway%3B phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate gene gene2206 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11365 LI89_11370 LI89_11370 LI89_11370 2479775 2480965 + tryptophan synthase subunit beta catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate gene gene2207 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11370 LI89_11375 LI89_11375 LI89_11375 2480965 2481771 + tryptophan synthase subunit alpha gene gene2208 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11375 LI89_11380 LI89_11380 LI89_11380 2482033 2482347 + hypothetical protein gene gene2209 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11380 LI89_11385 LI89_11385 LI89_11385 2482532 2483179 - membrane protein receptor for colicin S4 gene gene2210 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11385 LI89_11390 LI89_11390 LI89_11390 2483464 2483871 + Fe-S oxidoreductase gene gene2211 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11390 LI89_11395 LI89_11395 LI89_11395 2483923 2484690 + hypothetical protein gene gene2212 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11395 LI89_11400 LI89_11400 LI89_11400 2484790 2486478 - sulfate permease gene gene2213 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11400 LI89_11405 LI89_11405 LI89_11405 2486757 2487299 + intracellular septation protein A Involved in cell division%3B probably involved in intracellular septation gene gene2214 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11405 LI89_11410 LI89_11410 LI89_11410 2487319 2487768 + acyl-CoA esterase gene gene2215 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11410 LI89_11415 LI89_11415 LI89_11415 2487871 2488620 - energy transducer TonB gene gene2216 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11415 LI89_11420 LI89_11420 LI89_11420 2488926 2489222 + hypothetical protein unknown function%3B YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase%2C but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity gene gene2217 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11420 LI89_11425 LI89_11425 LI89_11425 2489425 2489688 - hypothetical protein gene gene2218 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11425 LI89_11430 LI89_11430 LI89_11430 2489860 2490582 - diguanylate phosphodiesterase gene gene2219 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11430 LI89_11435 LI89_11435 cls cls 2491654 2493114 + cardiolipin synthetase catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol) gene gene2220 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11435 LI89_11440 LI89_11440 LI89_11440 2493249 2493572 + dsDNA-mimic protein highly acidic protein%3B the structure of the Haemophilus influenzae protein shows similarity to uracil DNA glycosylase inhibitor (Ugi)%3B binds heat-unstable protein (HU-alpha) which is a histone-like protein gene gene2221 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11440 LI89_11445 LI89_11445 LI89_11445 2493734 2494735 - peptide ABC transporter ATP-binding protein with OppABCD is involved in the transport of oligopeptides%3B OppF and OppD are ATP-binding proteins gene gene2222 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11445 LI89_11450 LI89_11450 oppD oppD 2494732 2495691 - oligopeptide transporter ATP-binding component gene gene2223 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11450 LI89_11455 LI89_11455 LI89_11455 2495745 2496653 - peptide ABC transporter permease with OppABDF is involved in the transport of oligopeptides of up to 5 amino acids into the cell gene gene2224 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11455 LI89_11460 LI89_11460 oppB oppB 2496669 2497589 - oligopeptide transporter permease gene gene2225 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11460 LI89_11465 LI89_11465 LI89_11465 2497675 2499312 - peptide ABC transporter substrate-binding protein is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate gene gene2226 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11465 LI89_11470 LI89_11470 LI89_11470 2499541 2501178 - peptide ABC transporter substrate-binding protein is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate gene gene2227 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11470 LI89_11475 LI89_11475 LI89_11475 2501917 2502561 - membrane protein gene gene2228 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11475 LI89_11480 LI89_11480 LI89_11480 2503262 2505937 + acetaldehyde dehydrogenase gene gene2229 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11480 LI89_11485 LI89_11485 LI89_11485 2506437 2507036 - thymidine kinase catalyzes the formation of thymidine 5'-phosphate from thymidine gene gene2230 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11485 LI89_11490 LI89_11490 LI89_11490 2507006 2507278 + hypothetical protein gene gene2231 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11490 LI89_11495 LI89_11495 LI89_11495 2507789 2508199 + transcriptional regulator gene gene2232 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11495 LI89_11500 LI89_11500 LI89_11500 2508583 2509932 - UDP-glucose 6-dehydrogenase gene gene2233 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11500 LI89_11505 LI89_11505 LI89_11505 2510254 2511270 - response regulator of RpoS gene gene2234 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11505 LI89_11510 LI89_11510 LI89_11510 2511372 2512274 - hypothetical protein gene gene2235 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11510 LI89_11515 LI89_11515 LI89_11515 2512654 2513010 + histone acetyltransferase gene gene2236 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11515 LI89_11520 LI89_11520 LI89_11520 2513646 2514110 + hypothetical protein gene gene2237 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11520 LI89_11525 LI89_11525 LI89_11525 2514192 2515040 + formyltetrahydrofolate deformylase gene gene2238 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11525 LI89_11530 LI89_11530 LI89_11530 2515226 2515310 + tRNA-Tyr tRNA gene2239 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11530 LI89_11535 LI89_11535 LI89_11535 2515367 2515451 + tRNA-Tyr tRNA gene2240 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11535 LI89_11545 LI89_11545 LI89_11545 2516105 2516965 - LysR family transcriptional regulator gene gene2241 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11545 LI89_11550 LI89_11550 LI89_11550 2517745 2518551 + exodeoxyribonuclease III gene gene2242 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11550 LI89_11555 LI89_11555 LI89_11555 2518636 2519022 + pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase gene gene2243 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11555 LI89_11560 LI89_11560 LI89_11560 2519027 2519317 - hypothetical protein gene gene2244 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11560 LI89_11565 LI89_11565 LI89_11565 2519314 2521239 - DNA topoisomerase III decatenates replicating daughter chromosomes gene gene2245 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11565 LI89_11570 LI89_11570 LI89_11570 2521286 2522332 - selenophosphate synthetase catalyzes the formation of selenophosphate from selenide and ATP gene gene2246 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11570 LI89_11575 LI89_11575 LI89_11575 2522664 2523215 - oxidoreductase gene gene2247 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11575 LI89_11580 LI89_11580 LI89_11580 2523378 2525228 + protease 4 SppA%3B catalyzes the degradation of cleaved signal peptides%3B essential to maintain secretion of mature proteins across the membrane gene gene2248 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11580 LI89_11585 LI89_11585 ansA ansA 2525346 2526362 + cytoplasmic asparaginase I converts asparagine to aspartate and ammonia gene gene2249 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11585 LI89_11590 LI89_11590 LI89_11590 2526378 2527031 + PncA gene gene2250 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11590 LI89_11595 LI89_11595 LI89_11595 2527259 2527531 - transcriptional regulator gene gene2251 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11595 LI89_11600 LI89_11600 LI89_11600 2527605 2528018 - methionine sulfoxide reductase B gene gene2252 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11600 LI89_11605 LI89_11605 LI89_11605 2528366 2529361 + glyceraldehyde-3-phosphate dehydrogenase gene gene2253 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11605 LI89_11610 LI89_11610 LI89_11610 2529589 2530467 + glucose-6-phosphate 1-epimerase gene gene2254 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11610 LI89_11615 LI89_11615 LI89_11615 2530541 2531311 - MltA-interacting protein MipA scaffolding protein for the murein polymerase MrcB and the lytic transglycosylase MltA gene gene2255 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11615 LI89_11620 LI89_11620 LI89_11620 2531734 2533668 + serine/threonine protein kinase gene gene2256 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11620 LI89_11625 LI89_11625 LI89_11625 2533780 2535057 + hypothetical protein gene gene2257 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11625 LI89_11630 LI89_11630 LI89_11630 2535160 2536209 + membrane protein gene gene2258 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11630 LI89_11635 LI89_11635 LI89_11635 2536404 2536850 + hypothetical protein gene gene2259 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11635 LI89_11640 LI89_11640 LI89_11640 2536863 2537768 - LysR family transcriptional regulator gene gene2260 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11640 LI89_11645 LI89_11645 LI89_11645 2537937 2538809 + quercetin 2%2C3-dioxygenase gene gene2261 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11645 LI89_11650 LI89_11650 LI89_11650 2539155 2541749 + diguanylate phosphodiesterase gene gene2262 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11650 LI89_11655 LI89_11655 LI89_11655 2541920 2543110 + MFS transporter gene gene2263 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11655 LI89_11660 LI89_11660 LI89_11660 2543118 2544194 - alanine racemase converts L-alanine to D-alanine which is used in cell wall biosynthesis%3B binds one pyridoxal phosphate per monomer%3B forms a homodimer gene gene2264 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11660 LI89_11665 LI89_11665 LI89_11665 2544312 2545616 - amino acid dehydrogenase catalyzes the oxidative deamination of D-amino acids gene gene2265 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11665 LI89_11670 LI89_11670 LI89_11670 2546125 2547660 + SpoVR family protein gene gene2266 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11670 LI89_11675 LI89_11675 LI89_11675 2547746 2548465 - fatty acid metabolism regulator Multifunctional regulator of fatty acid metabolism gene gene2267 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11675 LI89_11680 LI89_11680 LI89_11680 2548776 2550350 + sodium:proton antiporter gene gene2268 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11680 LI89_11685 LI89_11685 LI89_11685 2550580 2551110 + hypothetical protein gene gene2269 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11685 LI89_11690 LI89_11690 LI89_11690 2551267 2552055 - UDP-N-acetylglucosamine acyltransferase catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis gene gene2270 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11690 LI89_11695 LI89_11695 LI89_11695 2552609 2552965 - hypothetical protein gene gene2271 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11695 LI89_11700 LI89_11700 LI89_11700 2553031 2553477 - hypothetical protein gene gene2272 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11700 LI89_11705 LI89_11705 LI89_11705 2553592 2554248 - hypothetical protein gene gene2273 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11705 LI89_11710 LI89_11710 LI89_11710 2554329 2555402 - lytic murein transglycosylase gene gene2274 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11710 LI89_11715 LI89_11715 LI89_11715 2555441 2555713 - hypothetical protein gene gene2275 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11715 LI89_11720 LI89_11720 LI89_11720 2555793 2556155 - hypothetical protein gene gene2276 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11720 LI89_11725 LI89_11725 minC minC 2556707 2557393 + septum formation inhibitor blocks the formation of polar Z-ring septums gene gene2277 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11725 LI89_11730 LI89_11730 LI89_11730 2557419 2558231 + cell division inhibitor MinD ATPase%3B with MinC inhibits cell division by blocking formation of the polar Z ring septums gene gene2278 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11730 LI89_11735 LI89_11735 minE minE 2558235 2558504 + cell division topological specificity factor MinE works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell gene gene2279 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11735 LI89_11740 LI89_11740 LI89_11740 2558641 2559762 - ribonuclease D gene gene2280 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11740 LI89_11745 LI89_11745 LI89_11745 2559860 2561554 - long-chain fatty acid--CoA ligase Activates fatty acids by binding to coenzyme A gene gene2281 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11745 LI89_11750 LI89_11750 LI89_11750 2561895 2562500 - membrane protein gene gene2282 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11750 LI89_11755 LI89_11755 LI89_11755 2562607 2563305 - hypothetical protein gene gene2283 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11755 LI89_11760 LI89_11760 LI89_11760 2563380 2565284 - ATP-dependent helicase gene gene2284 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11760 LI89_11765 LI89_11765 LI89_11765 2565413 2565757 + endoribonuclease L-PSP gene gene2285 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11765 LI89_11770 LI89_11770 LI89_11770 2565890 2566219 - multidrug transporter with MdtJ is involved in resistance to deoxycholate%2C nalidixic acid%2C fosfomycin%2C and SDS gene gene2286 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11770 LI89_11775 LI89_11775 LI89_11775 2566206 2566583 - spermidine export protein MdtJ gene gene2287 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11775 LI89_11780 LI89_11780 LI89_11780 2567132 2567773 - keto-deoxy-phosphogluconate aldolase catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate%3B or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate gene gene2288 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11780 LI89_11785 LI89_11785 LI89_11785 2567915 2569399 - glucose-6-phosphate dehydrogenase catalyzes the formation of D-glucono-1%2C5-lactone 6-phosphate from D-glucose 6-phosphate gene gene2289 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11785 LI89_11790 LI89_11790 LI89_11790 2569752 2570621 + transcriptional regulator Represses the expression of the zwf%2C eda%2C glp and gap gene gene2290 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11790 LI89_11795 LI89_11795 LI89_11795 2570841 2572283 + pyruvate kinase catalyzes the formation of phosphoenolpyruvate from pyruvate gene gene2291 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11795 LI89_11800 LI89_11800 LI89_11800 2572375 2573337 - lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase gene gene2292 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11800 LI89_11805 LI89_11805 LI89_11805 2573421 2574737 - peptidase gene gene2293 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11805 LI89_11810 LI89_11810 znuA znuA 2574752 2575714 - zinc ABC transporter substrate-binding protein involved in transport of zinc(II) with ZnuA and C gene gene2294 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11810 LI89_11815 LI89_11815 znuC znuC 2575790 2576548 + zinc ABC transporter ATPase involved in transport of zinc(II) with ZnuA and C gene gene2295 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11815 LI89_11820 LI89_11820 znuB znuB 2576545 2577330 + high-affinity zinc transporter membrane component involved in transport of zinc(II) with ZnuA and C gene gene2296 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11820 LI89_11825 LI89_11825 tppB tppB 2577588 2579069 + peptide ABC transporter permease mutations in this gene confer resistance to the toxic peptide alafosfalin in Salmonella typhimurium%3B member of proton-dependent oligopeptide transport (POT) system family%3B in Escherichia coli this gene is regulated by OmpR although not via osmoregulation gene gene2297 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11825 LI89_11830 LI89_11830 ruvB ruvB 2579120 2580124 - ATP-dependent DNA helicase RuvB promotes strand exchange during homologous recombination%3B RuvAB complex promotes branch migration%3B RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences%3B forms hexameric rings around opposite DNA arms%3B requires ATP for branch migration and orientation of RuvAB complex determines direction of migration gene gene2298 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11830 LI89_11835 LI89_11835 ruvA ruvA 2580182 2580799 - ATP-dependent DNA helicase RuvA plays an essential role in ATP-dependent branch migration of the Holliday junction gene gene2299 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11835 LI89_11840 LI89_11840 ruvC ruvC 2580922 2581443 - Holliday junction resolvase endonuclease%3B resolves Holliday structures%3B forms a complex of RuvABC%3B the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration%3B RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity gene gene2300 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11840 LI89_11845 LI89_11845 LI89_11845 2581611 2582354 - hypothetical protein gene gene2301 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11845 LI89_11850 LI89_11850 nudB nudB 2582381 2582824 - dihydroneopterin triphosphate pyrophosphatase catalyzes the formation of dihydroneopterin phosphate from dihydroneopterin triphosphate gene gene2302 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11850 LI89_11855 LI89_11855 LI89_11855 2582824 2584620 - aspartyl-tRNA synthetase gene gene2303 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11855 LI89_11860 LI89_11860 LI89_11860 2585189 2585764 + hydrolase gene gene2304 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11860 LI89_11865 LI89_11865 LI89_11865 2585941 2586756 + hypothetical protein gene gene2305 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11865 LI89_11870 LI89_11870 LI89_11870 2586948 2587343 + membrane protein gene gene2306 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11870 LI89_11875 LI89_11875 LI89_11875 2587533 2588333 + tRNA methyltransferase gene gene2307 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11875 LI89_11880 LI89_11880 LI89_11880 2588330 2589301 + tRNA methyltransferase catalyzes the conversion of 5-hydroxyuridine to 5-methoxyuridine in tRNA gene gene2308 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11880 LI89_11885 LI89_11885 LI89_11885 2589362 2590126 - copper homeostasis protein CutC gene gene2309 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11885 LI89_11890 LI89_11890 LI89_11890 2590369 2590929 - metal-binding protein gene gene2310 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11890 LI89_11895 LI89_11895 LI89_11895 2591301 2593031 + arginyl-tRNA synthetase gene gene2311 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11895 LI89_11900 LI89_11900 LI89_11900 2593093 2594628 - membrane protein gene gene2312 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11900 LI89_11905 LI89_11905 LI89_11905 2594748 2595707 - virulence factor MviM gene gene2313 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11905 LI89_11910 LI89_11910 LI89_11910 2595700 2596341 - hypothetical protein gene gene2314 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11910 LI89_11915 LI89_11915 LI89_11915 2596349 2596933 - ribosomal-protein-alanine acetyltransferase gene gene2315 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11915 LI89_11925 LI89_11925 LI89_11925 2597608 2598342 + membrane protein gene gene2316 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11925 LI89_11930 LI89_11930 LI89_11930 2598354 2598671 - membrane protein gene gene2317 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11930 LI89_11935 LI89_11935 LI89_11935 2598926 2599243 - membrane protein gene gene2318 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11935 LI89_11940 LI89_11940 LI89_11940 2599499 2599816 - membrane protein gene gene2319 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11940 LI89_11945 LI89_11945 LI89_11945 2600492 2601697 + multidrug resistance protein MdtH Confers resistance to norfloxacin and enoxacin gene gene2320 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11945 LI89_11950 LI89_11950 LI89_11950 2601898 2602461 + lipoprotein gene gene2321 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11950 LI89_11955 LI89_11955 LI89_11955 2602499 2603059 - molecular chaperone gene gene2322 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11955 LI89_11960 LI89_11960 LI89_11960 2603122 2603859 - hydrolase gene gene2323 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11960 LI89_11965 LI89_11965 ghrA ghrA 2604009 2604950 - bifunctional glyoxylate/hydroxypyruvate reductase A catalyzes the formation of glycolate and glycerate from glyoxylate and hydroxypyruvate%2C respectively gene gene2324 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11965 LI89_11970 LI89_11970 LI89_11970 2605169 2605258 + tRNA-Ser tRNA gene2325 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11970 LI89_11975 LI89_11975 LI89_11975 2605448 2606332 + glycerophosphodiester phosphodiesterase gene gene2326 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11975 LI89_11980 LI89_11980 LI89_11980 2606473 2606562 + tRNA-Ser tRNA gene2327 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11980 LI89_11985 LI89_11985 LI89_11985 2606756 2607874 - membrane protein gene gene2328 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11985 LI89_11990 LI89_11990 LI89_11990 2608430 2610127 + transporter role in sulfate transport across the inner membrane%3B member of the SulP family of sulfate transporters%3B seems to mediate transport via sulfate/proton symport gene gene2329 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11990 LI89_11995 LI89_11995 LI89_11995 2610223 2611077 - 2-dehydro-3-deoxyphosphooctonate aldolase catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis gene gene2330 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_11995 LI89_12000 LI89_12000 LI89_12000 2611218 2612027 - hypothetical protein gene gene2331 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12000 LI89_12005 LI89_12005 LI89_12005 2612024 2612425 - siroheme synthase gene gene2332 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12005 LI89_12010 LI89_12010 LI89_12010 2612443 2613297 - SAM-dependent methyltransferase HemK%3B PrmC%3B transfers a methyl group from S-adenosylmethionine to amide nitrogen of specific glutamine residues in protein chain release factors PrfA and PrfB gene gene2333 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12010 LI89_12015 LI89_12015 prfA prfA 2613297 2614379 - peptide chain release factor 1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1%3B this protein is similar to release factor 2 gene gene2334 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12015 LI89_12020 LI89_12020 hemA hemA 2614411 2615673 - glutamyl-tRNA reductase catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH%3B the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid%3B functions in porphyrin (tetrapyrroles) biosynthesis%3B the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins gene gene2335 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12020 LI89_12025 LI89_12025 LI89_12025 2615978 2616601 + membrane protein gene gene2336 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12025 LI89_12030 LI89_12030 LI89_12030 2616603 2617484 + kinase gene gene2337 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12030 LI89_12035 LI89_12035 LI89_12035 2617682 2618629 + ribose-phosphate pyrophosphokinase catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP gene gene2338 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12035 LI89_12040 LI89_12040 LI89_12040 2618895 2619167 - hypothetical protein YchH%3B transcription activated by CRP (cyclic AMP receptor protein)%2C a global transcription factor involved in regulation of metabolism in enteric bacteria%3B ychH presents a class II promoter to bind CRP%3B unknown function gene gene2339 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12040 LI89_12050 LI89_12050 LI89_12050 2619499 2620092 + peptidyl-tRNA hydrolase gene gene2340 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12050 LI89_12055 LI89_12055 LI89_12055 2620147 2620605 - hypothetical protein gene gene2341 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12055 LI89_12060 LI89_12060 ychF ychF 2620873 2621964 + GTP-binding protein EngD%3B translation-associated GTPase%3B the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3)%3B fluorescence spectroscopy revealed nucleic acid binding%3B the yeast protein YBR025c interacts with the translation elongation factor eEF1 gene gene2342 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12060 LI89_12065 LI89_12065 LI89_12065 2622492 2623442 - hydroxyacid dehydrogenase gene gene2343 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12065 LI89_12070 LI89_12070 LI89_12070 2623452 2624768 - MFS transporter gene gene2344 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12070 LI89_12075 LI89_12075 LI89_12075 2624931 2626079 - galactonate dehydratase gene gene2345 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12075 LI89_12080 LI89_12080 LI89_12080 2626076 2626693 - 2-dehydro-3-deoxy-6-phosphogalactonate aldolase catalyzes the formation of D-glyceraldehyde 3-phosphate and pyruvate from 2-dehydro-3-deoxy-D-galactonate 6-phosphate%3B functions in galactonate metabolism gene gene2346 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12080 LI89_12085 LI89_12085 LI89_12085 2626677 2627573 - 2-oxo-3-deoxygalactonate kinase catalyzes the formation of 2-dehydro-3-deoxy-D-galactonate 6-phosphate from 2-dehydro-3-deoxy-D-galactonate gene gene2347 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12085 LI89_12090 LI89_12090 LI89_12090 2627570 2628268 - galactonate operon transcriptional repressor gene gene2348 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12090 LI89_12095 LI89_12095 LI89_12095 2628701 2629867 - beta-lactamase gene gene2349 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12095 LI89_12100 LI89_12100 LI89_12100 2630002 2630886 + LysR family transcriptional regulator gene gene2350 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12100 LI89_12105 LI89_12105 LI89_12105 2630993 2631649 - membrane protein gene gene2351 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12105 LI89_12110 LI89_12110 LI89_12110 2631951 2632835 - alpha/beta hydrolase gene gene2352 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12110 LI89_12115 LI89_12115 LI89_12115 2632993 2633475 - lysozyme gene gene2353 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12115 LI89_12120 LI89_12120 LI89_12120 2633477 2633653 - holin gene gene2354 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12120 LI89_12125 LI89_12125 LI89_12125 2633880 2634056 + hypothetical protein gene gene2355 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12125 LI89_12130 LI89_12130 LI89_12130 2634232 2634651 - antitermination protein Q gene gene2356 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12130 LI89_12135 LI89_12135 LI89_12135 2635076 2635258 - hypothetical protein gene gene2357 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12135 LI89_12140 LI89_12140 LI89_12140 2635402 2636046 - antibiotic acetyltransferase gene gene2358 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12140 LI89_12145 LI89_12145 LI89_12145 2636447 2636866 + DNA-binding protein gene gene2359 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12145 LI89_12150 LI89_12150 LI89_12150 2637377 2639116 + ABC transporter gene gene2360 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12150 LI89_12160 LI89_12160 hypothetical protein hypothetical protein 2639842 2640178 + disrupted pseudogene gene2361 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12160 LI89_12165 LI89_12165 LI89_12165 2640240 2640485 + hypothetical protein gene gene2362 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12165 LI89_12170 LI89_12170 LI89_12170 2640779 2640892 + transposase gene gene2363 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12170 LI89_12175 LI89_12175 LI89_12175 2640873 2641175 + transposase gene gene2364 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12175 LI89_12180 LI89_12180 LI89_12180 2641202 2642041 + transposase gene gene2365 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12180 LI89_12185 LI89_12185 LI89_12185 2642437 2642649 - hypothetical protein gene gene2366 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12185 LI89_12195 LI89_12195 hypothetical protein hypothetical protein 2643021 2643647 - disrupted pseudogene gene2367 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12195 LI89_12205 LI89_12205 LI89_12205 2645047 2646453 + hypothetical protein gene gene2368 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12205 LI89_12210 LI89_12210 LI89_12210 2646955 2647971 - hypothetical protein gene gene2369 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12210 LI89_12220 LI89_12220 LI89_12220 2648394 2649554 + integrase gene gene2370 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12220 LI89_12230 LI89_12230 LI89_12230 2651913 2652383 - phage tail protein gene gene2371 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12230 LI89_12235 LI89_12235 LI89_12235 2652397 2653500 - hypothetical protein gene gene2372 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12235 LI89_12240 LI89_12240 LI89_12240 2653514 2654158 - hypothetical protein gene gene2373 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12240 LI89_12245 LI89_12245 LI89_12245 2654151 2655350 - phage baseplate protein gene gene2374 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12245 LI89_12250 LI89_12250 LI89_12250 2655350 2655700 - hypothetical protein gene gene2375 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12250 LI89_12255 LI89_12255 LI89_12255 2655773 2656450 - hypothetical protein gene gene2376 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12255 LI89_12260 LI89_12260 LI89_12260 2656458 2657351 - hypothetical protein gene gene2377 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12260 LI89_12265 LI89_12265 LI89_12265 2657344 2657634 - hypothetical protein gene gene2378 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12265 LI89_12270 LI89_12270 LI89_12270 2657634 2658302 - hypothetical protein gene gene2379 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12270 LI89_12275 LI89_12275 LI89_12275 2658302 2659966 - lysozyme gene gene2380 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12275 LI89_12280 LI89_12280 LI89_12280 2660084 2660416 - membrane protein gene gene2381 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12280 LI89_12285 LI89_12285 LI89_12285 2660370 2660948 - peptidoglycan-binding domain-containing protein gene gene2382 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12285 LI89_12295 LI89_12295 LI89_12295 2661211 2661600 - hypothetical protein gene gene2383 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12295 LI89_12300 LI89_12300 LI89_12300 2661603 2662007 - hypothetical protein gene gene2384 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12300 LI89_12315 LI89_12315 LI89_12315 2663427 2663768 - hypothetical protein gene gene2385 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12315 LI89_12320 LI89_12320 LI89_12320 2663865 2664749 - copper resistance protein CopD gene gene2386 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12320 LI89_12325 LI89_12325 LI89_12325 2664751 2665137 - hypothetical protein gene gene2387 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12325 LI89_12330 LI89_12330 LI89_12330 2665528 2666037 - ferritin cytoplasmic iron storage protein gene gene2388 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12330 LI89_12335 LI89_12335 LI89_12335 2666421 2666654 + DNA polymerase III subunit theta gene gene2389 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12335 LI89_12340 LI89_12340 LI89_12340 2666703 2667659 - proline iminopeptidase gene gene2390 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12340 LI89_12350 LI89_12350 LI89_12350 2668170 2668832 + exodeoxyribonuclease X 3'-5' exonuclease activity on single or double-strand DNA gene gene2391 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12350 LI89_12355 LI89_12355 LI89_12355 2668844 2670898 - protease 2 PtrB%3B oligopeptidase that cleaves peptide bonds following arginine and lysine residues gene gene2392 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12355 LI89_12360 LI89_12360 LI89_12360 2671088 2671444 - hypothetical protein gene gene2393 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12360 LI89_12365 LI89_12365 LI89_12365 2671546 2671857 - hypothetical protein gene gene2394 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12365 LI89_12370 LI89_12370 LI89_12370 2671897 2672217 - hypothetical protein gene gene2395 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12370 LI89_12375 LI89_12375 LI89_12375 2672313 2673695 - ATP-dependent RNA helicase DbpA exhibits an RNA-dependent ATPase activity%2C specifically stimulated by bacterial 23S rRNA gene gene2396 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12375 LI89_12380 LI89_12380 LI89_12380 2673949 2675130 + phosphoribosylglycinamide formyltransferase gene gene2397 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12380 LI89_12385 LI89_12385 LI89_12385 2675415 2675672 - hypothetical protein gene gene2398 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12385 LI89_12390 LI89_12390 pabB pabB 2675861 2677231 + aminodeoxychorismate synthase para-aminobenzoate synthase component 1%3B catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and L-glutamine gene gene2399 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12390 LI89_12395 LI89_12395 LI89_12395 2677244 2677831 + NUDIX hydrolase gene gene2400 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12395 LI89_12400 LI89_12400 LI89_12400 2678285 2679649 + serine dehydratase catalyzes the formation of pyruvate from serine gene gene2401 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12400 LI89_12405 LI89_12405 LI89_12405 2680581 2682125 - membrane protein gene gene2402 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12405 LI89_12410 LI89_12410 LI89_12410 2682895 2683860 + PTS mannose transporter subunit IIAB catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B subunit IIA transfers a phosphoryl group to subunit IIB%3B subunit IIB transfers the phosphoryl group to the substrate gene gene2403 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12410 LI89_12415 LI89_12415 LI89_12415 2683953 2684750 + PTS mannose transporter subunit IIC catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B the IIC domain forms the PTS system translocation channel and contains the specific substrate-binding site gene gene2404 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12415 LI89_12420 LI89_12420 LI89_12420 2684766 2685629 + PTS mannose transporter subunit IID hosphoenolpyruvate-dependent sugar phosphotransferase system catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IID with IIC forms the translocation channel gene gene2405 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12420 LI89_12425 LI89_12425 LI89_12425 2685847 2686308 + hypothetical protein gene gene2406 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12425 LI89_12430 LI89_12430 LI89_12430 2686735 2687304 + hypothetical protein membrane protein YebN gene gene2407 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12430 LI89_12435 LI89_12435 LI89_12435 2687441 2689720 - TonB-dependent receptor gene gene2408 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12435 LI89_12440 LI89_12440 LI89_12440 2690306 2692387 + diguanylate cyclase gene gene2409 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12440 LI89_12445 LI89_12445 LI89_12445 2692555 2692833 + hypothetical protein gene gene2410 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12445 LI89_12450 LI89_12450 LI89_12450 2692996 2693856 - 23S rRNA methyltransferase gene gene2411 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12450 LI89_12455 LI89_12455 LI89_12455 2693974 2695683 - cell division protein FtsI penicillin-binding protein 3%3B transpeptidase involved in septal peptidoglycan synthesis gene gene2412 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12455 LI89_12460 LI89_12460 LI89_12460 2695885 2696604 + polyphenol oxidoreductase gene gene2413 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12460 LI89_12465 LI89_12465 LI89_12465 2696682 2696891 - cold-shock protein gene gene2414 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12465 LI89_12470 LI89_12470 LI89_12470 2696934 2697050 - hypothetical protein gene gene2415 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12470 LI89_12475 LI89_12475 LI89_12475 2698039 2698653 + phospholipid:lipid A palmitoyltransferase gene gene2416 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12475 LI89_12480 LI89_12480 LI89_12480 2698895 2700286 - aromatic amino acid transporter gene gene2417 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12480 LI89_12485 LI89_12485 LI89_12485 2700478 2700723 - hypothetical protein gene gene2418 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12485 LI89_12490 LI89_12490 LI89_12490 2700830 2701129 - hypothetical protein gene gene2419 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12490 LI89_12495 LI89_12495 LI89_12495 2701331 2701606 - hypothetical protein gene gene2420 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12495 LI89_12500 LI89_12500 LI89_12500 2702145 2702378 + membrane protein gene gene2421 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12500 LI89_12505 LI89_12505 LI89_12505 2702471 2702710 - hypothetical protein gene gene2422 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12505 LI89_12510 LI89_12510 LI89_12510 2703021 2703134 - membrane protein gene gene2423 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12510 LI89_12515 LI89_12515 LI89_12515 2703373 2703759 + AraC family transcriptional regulator gene gene2424 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12515 LI89_12520 LI89_12520 LI89_12520 2703818 2703982 - membrane protein gene gene2425 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12520 LI89_12525 LI89_12525 LI89_12525 2704009 2704191 - hypothetical protein gene gene2426 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12525 LI89_12530 LI89_12530 LI89_12530 2704418 2705920 - amino acid APC transporter gene gene2427 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12530 LI89_12535 LI89_12535 LI89_12535 2706188 2706607 - acetyltransferase gene gene2428 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12535 LI89_12540 LI89_12540 LI89_12540 2706807 2708525 + multidrug ABC transporter ATP-binding protein gene gene2429 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12540 LI89_12545 LI89_12545 LI89_12545 2708628 2709476 + kinase gene gene2430 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12545 LI89_12550 LI89_12550 LI89_12550 2709593 2710543 - toxin gene gene2431 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12550 LI89_12555 LI89_12555 LI89_12555 2710569 2711090 - hypothetical protein gene gene2432 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12555 LI89_12560 LI89_12560 LI89_12560 2711236 2712639 - hypothetical protein gene gene2433 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12560 LI89_12565 LI89_12565 LI89_12565 2712894 2713154 + hypothetical protein gene gene2434 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12565 LI89_12570 LI89_12570 LI89_12570 2713426 2713737 + acid-resistance protein gene gene2435 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12570 LI89_12575 LI89_12575 LI89_12575 2713816 2714205 + hypothetical protein gene gene2436 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12575 LI89_12580 LI89_12580 LI89_12580 2714229 2715104 - AraC family transcriptional regulator gene gene2437 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12580 LI89_12585 LI89_12585 LI89_12585 2715287 2716195 + multidrug DMT transporter permease gene gene2438 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12585 LI89_12590 LI89_12590 LI89_12590 2716282 2717550 - MFS transporter gene gene2439 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12590 LI89_12595 LI89_12595 LI89_12595 2717774 2719081 - fuconate dehydratase gene gene2440 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12595 LI89_12600 LI89_12600 LI89_12600 2719650 2720555 - GntR family transcriptional regulator gene gene2441 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12600 LI89_12605 LI89_12605 LI89_12605 2720705 2721727 + galactonate oxidoreductase gene gene2442 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12605 LI89_12610 LI89_12610 LI89_12610 2721755 2723206 + altronate oxidoreductase catalyzes the formation of D-tagaturonate from D-altronate gene gene2443 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12610 LI89_12615 LI89_12615 LI89_12615 2723233 2724723 + altronate hydrolase gene gene2444 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12615 LI89_12620 LI89_12620 LI89_12620 2724774 2725556 - arginine ABC transporter ATP-binding protein gene gene2445 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12620 LI89_12625 LI89_12625 LI89_12625 2725549 2726202 - amino acid ABC transporter permease gene gene2446 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12625 LI89_12630 LI89_12630 LI89_12630 2726243 2726908 - amino acid ABC transporter permease gene gene2447 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12630 LI89_12635 LI89_12635 LI89_12635 2726934 2727881 - hypothetical protein gene gene2448 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12635 LI89_12640 LI89_12640 LI89_12640 2727962 2728846 - ABC transporter substrate-binding protein gene gene2449 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12640 LI89_12650 LI89_12650 LI89_12650 2729336 2729620 + hypothetical protein gene gene2450 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12650 LI89_12655 LI89_12655 LI89_12655 2729684 2730094 - transcriptional regulator gene gene2451 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12655 LI89_12660 LI89_12660 LI89_12660 2730224 2731081 + quinone oxidoreductase gene gene2452 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12660 LI89_12665 LI89_12665 LI89_12665 2731153 2732430 - O-acetylhomoserine aminocarboxypropyltransferase catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol gene gene2453 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12665 LI89_12670 LI89_12670 LI89_12670 2732937 2734001 + hypothetical protein gene gene2454 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12670 LI89_12675 LI89_12675 LI89_12675 2734327 2735163 + hypothetical protein gene gene2455 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12675 LI89_12680 LI89_12680 LI89_12680 2735243 2735464 + lysis protein gene gene2456 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12680 LI89_12685 LI89_12685 LI89_12685 2735442 2735936 + lysozyme gene gene2457 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12685 LI89_12690 LI89_12690 LI89_12690 2735912 2736250 + hypothetical protein gene gene2458 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12690 LI89_12700 LI89_12700 LI89_12700 2736646 2737002 + UV protection and mutation protein gene gene2459 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12700 LI89_12705 LI89_12705 LI89_12705 2737002 2738270 + DNA polymerase V subunit UmuC binds processed UmuD protein to form functional DNA pol V (UmuD'2UmuC)%3B involved in translesion polymerization gene gene2460 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12705 LI89_12710 LI89_12710 chemotaxis protein chemotaxis protein 2738840 2740399 + disrupted pseudogene gene2461 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12710 LI89_12715 LI89_12715 LI89_12715 2740573 2740833 + hypothetical protein gene gene2462 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12715 LI89_12720 LI89_12720 LI89_12720 2740965 2741960 + sucrose operon repressor gene gene2463 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12720 LI89_12725 LI89_12725 LI89_12725 2741963 2743432 - glycosyl hydrolase family 32 gene gene2464 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12725 LI89_12730 LI89_12730 LI89_12730 2743438 2744679 - galactoside permease gene gene2465 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12730 LI89_12740 LI89_12740 LI89_12740 2745184 2746422 - O-antigen biosynthesis protein gene gene2466 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12740 LI89_12745 LI89_12745 LI89_12745 2746556 2747416 - glycosyltransferase group 2 gene gene2467 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12745 LI89_12750 LI89_12750 hypothetical protein hypothetical protein 2747922 2749147 + disrupted pseudogene gene2468 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12750 LI89_12755 LI89_12755 LI89_12755 2749152 2749493 + hypothetical protein gene gene2469 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12755 LI89_12760 LI89_12760 LI89_12760 2750008 2751261 - isocitrate dehydrogenase Converts isocitrate to alpha ketoglutarate gene gene2470 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12760 LI89_12765 LI89_12765 LI89_12765 2751392 2752018 + 23S rRNA pseudouridylate synthase catalyzes the formation of pseudouridine from uracil-2457 in 23S ribosomal RNA gene gene2471 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12765 LI89_12770 LI89_12770 LI89_12770 2752011 2752457 + phosphatase gene gene2472 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12770 LI89_12775 LI89_12775 mnmA mnmA 2752644 2753765 + tRNA 2-thiouridylase catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs gene gene2473 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12775 LI89_12780 LI89_12780 LI89_12780 2753806 2754432 + lysogenization regulator HflD%3B UPF0274%3B in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein%3B in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis gene gene2474 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12780 LI89_12785 LI89_12785 LI89_12785 2754458 2755828 + adenylosuccinate lyase Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide gene gene2475 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12785 LI89_12790 LI89_12790 LI89_12790 2755983 2756606 + hypothetical protein gene gene2476 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12790 LI89_12795 LI89_12795 LI89_12795 2756678 2757349 + transcriptional regulator response regulator in two-component regulatory system with PhoQ%3B involved in magnesium starvation and stress gene gene2477 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12795 LI89_12800 LI89_12800 LI89_12800 2757355 2758809 + sensor protein PhoQ gene gene2478 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12800 LI89_12805 LI89_12805 LI89_12805 2758894 2760015 + 50S ribosomal protein L16 arginine hydroxylase gene gene2479 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12805 LI89_12810 LI89_12810 LI89_12810 2760256 2761497 - peptidase T gene gene2480 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12810 LI89_12815 LI89_12815 LI89_12815 2761669 2762505 - NAD-dependent deacetylase Modulates the activities of several enzymes which are inactive in their acetylated form gene gene2481 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12815 LI89_12820 LI89_12820 LI89_12820 2762551 2763465 - N-acetylglucosamine kinase catalyzes the formation of N-acetyl-D-glucosamine-6-phosphate from N-acetyl-D-glucosamine gene gene2482 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12820 LI89_12830 LI89_12830 LI89_12830 2763682 2764929 - outer membrane-specific lipoprotein transporter subunit LolE part of the ATP-dependent transport system LolCDE%3B responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane gene gene2483 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12830 LI89_12835 LI89_12835 lolD lolD 2764941 2765645 - lipoprotein ABC transporter ATP-binding protein outer membrane specific%3B part of transporter complex lolCDE involved in the translocation of mature outer membrane-directed lipoproteins%2C from the inner membrane to the periplasmic chaperone gene gene2484 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12835 LI89_12840 LI89_12840 LI89_12840 2765638 2766840 - outer membrane-specific lipoprotein transporter subunit LolC part of the ATP-dependent transport system LolCDE%3B responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane gene gene2485 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12840 LI89_12845 LI89_12845 LI89_12845 2767161 2770607 + transcription-repair coupling factor gene gene2486 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12845 LI89_12850 LI89_12850 LI89_12850 2770746 2771285 - hypothetical protein gene gene2487 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12850 LI89_12855 LI89_12855 LI89_12855 2771851 2773155 - NADH dehydrogenase gene gene2488 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12855 LI89_12860 LI89_12860 LI89_12860 2773543 2774085 - hypothetical protein gene gene2489 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12860 LI89_12865 LI89_12865 LI89_12865 2774113 2775141 - beta-hexosaminidase hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides gene gene2490 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12865 LI89_12870 LI89_12870 LI89_12870 2775171 2776007 - thiamine kinase gene gene2491 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12870 LI89_12875 LI89_12875 LI89_12875 2776066 2776647 - penicillin-binding protein gene gene2492 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12875 LI89_12880 LI89_12880 LI89_12880 2776701 2777090 - membrane protein gene gene2493 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12880 LI89_12885 LI89_12885 LI89_12885 2777127 2777480 - purine nucleoside phosphoramidase gene gene2494 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12885 LI89_12890 LI89_12890 LI89_12890 2777556 2778377 - shikimate dehydrogenase gene gene2495 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12890 LI89_12895 LI89_12895 LI89_12895 2778525 2780315 + peptide ABC transporter substrate-binding protein gene gene2496 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12895 LI89_12900 LI89_12900 LI89_12900 2780543 2781976 - PTS glucose-specific subunit IIBC phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel gene gene2497 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12900 LI89_12905 LI89_12905 LI89_12905 2782284 2783093 - DNAse gene gene2498 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12905 LI89_12910 LI89_12910 LI89_12910 2783108 2784115 - DNA polymerase III subunit delta' catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand%3B the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA gene gene2499 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12910 LI89_12915 LI89_12915 LI89_12915 2784115 2784753 - thymidylate kinase gene gene2500 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12915 LI89_12920 LI89_12920 LI89_12920 2784743 2785768 - aminodeoxychorismate lyase gene gene2501 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12920 LI89_12925 LI89_12925 LI89_12925 2785830 2786654 - 4-amino-4-deoxychorismate lyase catalyzes the formation of 4-aminobenzoate and pyruvate from 4-amino-4-deoxychorismate gene gene2502 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12925 LI89_12930 LI89_12930 LI89_12930 2786892 2788133 - 3-oxoacyl-ACP synthase FabF%3B beta-ketoacyl-ACP synthase II%2C KASII%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP gene gene2503 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12930 LI89_12935 LI89_12935 LI89_12935 2788228 2788464 - acyl carrier protein carries the fatty acid chain in fatty acid biosynthesis gene gene2504 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12935 LI89_12940 LI89_12940 fabG fabG 2788618 2789352 - 3-ketoacyl-ACP reductase catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis gene gene2505 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12940 LI89_12945 LI89_12945 LI89_12945 2789366 2790295 - malonyl CoA-ACP transacylase gene gene2506 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12945 LI89_12950 LI89_12950 LI89_12950 2790333 2791286 - 3-oxoacyl-ACP synthase FabH%3B beta-ketoacyl-acyl carrier protein synthase III%3B catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation%3B differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs gene gene2507 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12950 LI89_12955 LI89_12955 LI89_12955 2791293 2792297 - phosphate acyltransferase gene gene2508 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12955 LI89_12960 LI89_12960 rpmF rpmF 2792364 2792531 - 50S ribosomal protein L32 some L32 proteins have zinc finger motifs consisting of CXXC while others do not gene gene2509 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12960 LI89_12965 LI89_12965 LI89_12965 2792537 2793067 - hypothetical protein gene gene2510 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12965 LI89_12970 LI89_12970 LI89_12970 2793209 2793790 + septum formation inhibitor Maf Maf%3B overexpression in Bacillus subtilis inhibits septation in the dividing cell gene gene2511 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12970 LI89_12975 LI89_12975 LI89_12975 2793842 2794801 - 23S rRNA pseudouridylate synthase catalyzes the transformation of uracil to pseudouracil at nucleotides U955%2C U2504%2C and U2580 in 23S rRNA gene gene2512 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12975 LI89_12980 LI89_12980 LI89_12980 2795378 2798815 + ribonuclease E gene gene2513 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12980 LI89_12985 LI89_12985 LI89_12985 2798885 2799172 - antibiotic biosynthesis monooxygenase gene gene2514 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12985 LI89_12990 LI89_12990 LI89_12990 2799399 2800445 + dihydroorotase gene gene2515 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12990 LI89_12995 LI89_12995 LI89_12995 2800562 2800807 + damage-inducible protein I gene gene2516 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_12995 LI89_13000 LI89_13000 bssS bssS 2801170 2801424 + biofilm formation regulatory protein BssS BssS%3B regulator of biofilm through signal secretion%3B disruption of this gene in Escherichia coli led to effects on biofilm formation%2C alteration in expression of a number of genes and mutations in bssS led to defects in indole transport and autoinducer-2 uptake and processing gene gene2517 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13000 LI89_13005 LI89_13005 solA solA 2801688 2802809 + N-methyltryptophan oxidase catalyzes the demethylation of N-methyl-L-tryptophan forming L-tryptophan and formaldehyde%3B FAD-binding%3B can also catalyze the demethylation of other N-methyl amino acids gene gene2518 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13005 LI89_13010 LI89_13010 LI89_13010 2803068 2803652 + LuxR family transcriptional regulator gene gene2519 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13010 LI89_13015 LI89_13015 tqsA tqsA 2804163 2805224 - pheromone autoinducer 2 transporter transport of quorum-sensing signal%3B mutations in this gene alters the transport of the quorum-sensing signal autoinducer 2 (AI-2) which affects expression of a large number of genes gene gene2520 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13015 LI89_13020 LI89_13020 LI89_13020 2805520 2806584 - sulfurtransferase gene gene2521 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13020 LI89_13025 LI89_13025 LI89_13025 2806762 2806920 - membrane protein gene gene2522 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13025 LI89_13030 LI89_13030 LI89_13030 2807061 2810144 - tetrathionate reductase subunit A gene gene2523 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13030 LI89_13035 LI89_13035 LI89_13035 2810137 2811222 - tetrathionate reductase subunit C gene gene2524 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13035 LI89_13040 LI89_13040 LI89_13040 2811219 2811953 - tetrathionate reductase subunit B gene gene2525 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13040 LI89_13045 LI89_13045 LI89_13045 2812092 2813852 + histidine kinase gene gene2526 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13045 LI89_13050 LI89_13050 LI89_13050 2813830 2814414 + tetrathionate reductase gene gene2527 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13050 LI89_13055 LI89_13055 LI89_13055 2814670 2815590 + lipid A biosynthesis lauroyl acyltransferase Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA gene gene2528 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13055 LI89_13060 LI89_13060 LI89_13060 2815761 2816195 + DoxX gene gene2529 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13060 LI89_13065 LI89_13065 LI89_13065 2816492 2817736 + multidrug transporter Confers resistance to fosfomycin and deoxycholate gene gene2530 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13065 LI89_13070 LI89_13070 LI89_13070 2818053 2819588 + amino acid transporter gene gene2531 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13070 LI89_13075 LI89_13075 LI89_13075 2819761 2820195 - glyoxalase gene gene2532 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13075 LI89_13080 LI89_13080 LI89_13080 2820213 2820473 - lipoprotein gene gene2533 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13080 LI89_13085 LI89_13085 LI89_13085 2820567 2823104 - glucosyltransferase MdoH necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space gene gene2534 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13085 LI89_13090 LI89_13090 mdoG mdoG 2823142 2824695 - glucan biosynthesis protein G involved in the biosynthesis of osmoregulated periplasmic glucans%3B required for the assembly of the polyglucose structure of glucan gene gene2535 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13090 LI89_13095 LI89_13095 opgC opgC 2825028 2826167 + glucans biosynthesis protein required for the transfer of succinyl residues to osmoregulated periplasmic glucans gene gene2536 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13095 LI89_13100 LI89_13100 LI89_13100 2826502 2826747 + hypothetical protein gene gene2537 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13100 LI89_13105 LI89_13105 cvrA cvrA 2827142 2828869 + potassium/proton antiporter the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter%3B can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli gene gene2538 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13105 LI89_13110 LI89_13110 LI89_13110 2828977 2829909 - multidrug DMT transporter gene gene2539 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13110 LI89_13115 LI89_13115 LI89_13115 2830209 2830853 + acyl-homoserine-lactone synthase gene gene2540 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13115 LI89_13120 LI89_13120 LI89_13120 2830846 2831580 - LuxR family transcriptional regulator gene gene2541 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13120 LI89_13125 LI89_13125 LI89_13125 2832317 2832985 - cytochrome C heme lyase gene gene2542 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13125 LI89_13130 LI89_13130 LI89_13130 2832985 2833395 - nitrite reductase gene gene2543 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13130 LI89_13135 LI89_13135 LI89_13135 2833392 2833940 - thiol:disulfide interchange protein DsbE gene gene2544 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13135 LI89_13140 LI89_13140 LI89_13140 2833937 2835826 - cytochrome C biogenesis protein gene gene2545 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13140 LI89_13145 LI89_13145 LI89_13145 2835857 2836822 - nitrite reductase membrane protein%2C may be involved in the transfer of electrons from quinones to c-type cytochromes gene gene2546 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13145 LI89_13150 LI89_13150 LI89_13150 2836819 2837490 - nitrite reductase 4Fe4S subunit%3B may be involved in the transfer of electrons from quinones to the c-type cytochromes gene gene2547 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13150 LI89_13155 LI89_13155 LI89_13155 2837487 2838053 - cytochrome C nitrite reductase gene gene2548 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13155 LI89_13160 LI89_13160 nrfA nrfA 2838144 2839493 - cytochrome C nitrite reductase catalyzes the formate-dependent reduction of nitrite to ammonia%3B cytochrome C552 gene gene2549 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13160 LI89_13165 LI89_13165 LI89_13165 2840167 2842182 + phosphoglycerol transferase gene gene2550 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13165 LI89_13170 LI89_13170 LI89_13170 2842401 2842488 - tRNA-Ser tRNA gene2551 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13170 LI89_13175 LI89_13175 LI89_13175 2842743 2843072 + sulfur transfer protein TusE transfers sulfur from TusBCD complex to MnmA%3B involved in thiouridation of U34 position of some tRNAs gene gene2552 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13175 LI89_13180 LI89_13180 LI89_13180 2843100 2843378 - acylphosphatase catalyzes the hydrolysis of acylphosphate gene gene2553 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13180 LI89_13185 LI89_13185 LI89_13185 2843398 2843763 - membrane protein gene gene2554 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13185 LI89_13190 LI89_13190 LI89_13190 2843776 2843985 - hypothetical protein gene gene2555 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13190 LI89_13195 LI89_13195 LI89_13195 2844241 2845431 + 23S rRNA methyltransferase SAM-dependent%3Bcatalyzes the methylation of cytosine at position 1962 of the 23S rRNA gene gene2556 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13195 LI89_13200 LI89_13200 LI89_13200 2845494 2845811 + heat shock protein HspQ gene gene2557 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13200 LI89_13205 LI89_13205 LI89_13205 2845894 2846310 - hypothetical protein gene gene2558 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13205 LI89_13210 LI89_13210 LI89_13210 2846626 2847309 + hypothetical protein gene gene2559 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13210 LI89_13215 LI89_13215 LI89_13215 2847513 2847971 + methylglyoxal synthase gene gene2560 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13215 LI89_13220 LI89_13220 helD helD 2848034 2850088 - DNA helicase IV catalyzes the ATP-dependent unwinding of duplex DNA in the 3' to 5' direction with respect to the bound single strand gene gene2561 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13220 LI89_13225 LI89_13225 LI89_13225 2850283 2850735 + membrane protein gene gene2562 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13225 LI89_13230 LI89_13230 LI89_13230 2850760 2852895 + membrane protein gene gene2563 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13230 LI89_13235 LI89_13235 LI89_13235 2852932 2853567 - DNA transformation protein tfoX gene gene2564 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13235 LI89_13240 LI89_13240 LI89_13240 2853797 2854303 + cell division protein gene gene2565 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13240 LI89_13245 LI89_13245 LI89_13245 2854661 2855734 + membrane protein OmpA is believed to be a porin%2C involved in diffusion of nonspecific small solutes across the outer membrane. It is the most abundant integral protein of the outer membrane of E. coli%2C and it is known to play a role as a phage receptor%2C a mediator of F-factor dependent conjugation%2C and in maintaining the structural shape of the outer membrane%3B 3a%3B II*%3B G%3B d gene gene2566 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13245 LI89_13250 LI89_13250 LI89_13250 2855866 2856321 - Ter macrodomain organizer matS-binding protein gene gene2567 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13250 LI89_13255 LI89_13255 LI89_13255 2856511 2858283 + Lon protease gene gene2568 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13255 LI89_13260 LI89_13260 LI89_13260 2858352 2858870 + 3-hydroxydecanoyl-ACP dehydratase catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2%2C3-decenoyl-ACP or 3%2C4-decenoyl-ACP gene gene2569 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13260 LI89_13265 LI89_13265 LI89_13265 2859050 2859592 + acyl dehydratase gene gene2570 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13265 LI89_13270 LI89_13270 LI89_13270 2859592 2860866 + 3-oxoacyl-ACP synthase FabF%3B beta-ketoacyl-ACP synthase II%2C KASII%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP gene gene2571 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13270 LI89_13275 LI89_13275 LI89_13275 2861370 2861921 - membrane protein gene gene2572 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13275 LI89_13280 LI89_13280 LI89_13280 2861918 2863570 - paraquat-inducible protein B gene gene2573 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13280 LI89_13285 LI89_13285 LI89_13285 2863557 2864774 - paraquat-inducible protein A gene gene2574 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13285 LI89_13290 LI89_13290 LI89_13290 2864993 2866906 - ABC transporter ATPase Uup%3B in Escherichia coli this cytoplasmic protein was shown to contain ATPase activity%3B mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth gene gene2575 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13290 LI89_13295 LI89_13295 rlmL rlmL 2866912 2869032 - 23S rRNA methyltransferase catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA gene gene2576 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13295 LI89_13300 LI89_13300 LI89_13300 2869132 2870244 + hypothetical protein gene gene2577 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13300 LI89_13305 LI89_13305 LI89_13305 2870260 2870817 - cell division protein ZapC gene gene2578 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13305 LI89_13310 LI89_13310 LI89_13310 2870992 2872002 - dihydroorotate dehydrogenase catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway%3B uses a flavin nucleotide as an essential cofactor%3B class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus%2C which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors gene gene2579 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13310 LI89_13315 LI89_13315 pepN pepN 2872169 2874784 - aminopeptidase N gene gene2580 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13315 LI89_13320 LI89_13320 LI89_13320 2875392 2876597 + nicotinate phosphoribosyltransferase catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate gene gene2581 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13320 LI89_13325 LI89_13325 LI89_13325 2876854 2878254 + asparaginyl-tRNA synthetase gene gene2582 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13325 LI89_13330 LI89_13330 LI89_13330 2878553 2879668 + porin allows for ions and hydrophilic solutes to cross the outer membrane gene gene2583 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13330 LI89_13335 LI89_13335 LI89_13335 2879924 2881114 + aromatic amino acid aminotransferase gene gene2584 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13335 LI89_13340 LI89_13340 LI89_13340 2881371 2882900 - diguanylate phosphodiesterase gene gene2585 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13340 LI89_13345 LI89_13345 LI89_13345 2883199 2883846 - hypothetical protein gene gene2586 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13345 LI89_13350 LI89_13350 LI89_13350 2883905 2884453 - hypothetical protein gene gene2587 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13350 LI89_13355 LI89_13355 LI89_13355 2884713 2886581 - peptidase gene gene2588 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13355 LI89_13360 LI89_13360 mukB mukB 2886904 2891349 - cell division protein MukB SMC (structural maintenance of chromosomes) family of proteins%3B involved in chromosome condensatin and partitioning%3B forms a homodimer and the C-terminal is essential for DNA-binding activity while the purified N-terminal domain binds FtsZ%3B mutations result in cell division defects gene gene2589 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13360 LI89_13365 LI89_13365 LI89_13365 2891346 2892047 - condesin subunit E acts with MukB and MukF to condense the chromosome and allow for segregation during cell division gene gene2590 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13365 LI89_13370 LI89_13370 LI89_13370 2892055 2893377 - condesin subunit F acts with MukB and MukE to condense the chromosome and allow for segregation during cell division gene gene2591 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13370 LI89_13375 LI89_13375 LI89_13375 2893374 2894159 - SAM-dependent methyltransferase gene gene2592 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13375 LI89_13380 LI89_13380 LI89_13380 2894345 2895112 + hypothetical protein gene gene2593 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13380 LI89_13385 LI89_13385 LI89_13385 2895115 2896008 - hypothetical protein gene gene2594 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13385 LI89_13390 LI89_13390 LI89_13390 2896198 2896950 - 3-deoxy-manno-octulosonate cytidylyltransferase CMP-2-keto-3-deoxyoctulosonic acid synthetase%3B catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS gene gene2595 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13390 LI89_13395 LI89_13395 LI89_13395 2896947 2897129 - hypothetical protein gene gene2596 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13395 LI89_13400 LI89_13400 LI89_13400 2897561 2897770 - cold-shock protein gene gene2597 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13400 LI89_13405 LI89_13405 LI89_13405 2897986 2898195 - cold-shock protein gene gene2598 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13405 LI89_13410 LI89_13410 LI89_13410 2898655 2900061 + hypothetical protein gene gene2599 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13410 LI89_13415 LI89_13415 lpxK lpxK 2900068 2901054 - tetraacyldisaccharide 4'-kinase transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1%2C4'-bis-phosphate gene gene2600 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13415 LI89_13420 LI89_13420 LI89_13420 2901051 2902799 - lipid transporter ATP-binding/permease involved in the transport of lipid A across the inner membrane gene gene2601 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13420 LI89_13425 LI89_13425 LI89_13425 2902835 2905120 - competence protein ComEC gene gene2602 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13425 LI89_13430 LI89_13430 ihfB ihfB 2905458 2905742 - integration host factor subunit beta This protein is one of the two subunits of integration host factor%2C a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control gene gene2603 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13430 LI89_13435 LI89_13435 rpsA rpsA 2905806 2907479 - 30S ribosomal protein S1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit%3B autoregulates expression via a C-terminal domain%3B in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats%3B the S1 nucleic acid-binding domain is found associated with other proteins gene gene2604 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13435 LI89_13440 LI89_13440 LI89_13440 2907648 2908340 - cytidylate kinase gene gene2605 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13440 LI89_13445 LI89_13445 LI89_13445 2908580 2909866 - 3-phosphoshikimate 1-carboxyvinyltransferase gene gene2606 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13445 LI89_13450 LI89_13450 LI89_13450 2909996 2911081 - 3-phosphoserine/phosphohydroxythreonine aminotransferase catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate%3B catalyzes 4 phosphohydroxy L-threonine from 2-oxo 3 hydroxy 4- phosphobutanoate%3B required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine gene gene2607 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13450 LI89_13455 LI89_13455 LI89_13455 2911288 2911980 - membrane protein gene gene2608 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13455 LI89_13460 LI89_13460 ansB ansB 2912127 2913164 - L-asparaginase II catalyzes the formation of aspartate from asparagine%2C periplasmic%3B regulated by cyclic AMP receptor protein (CRP) and also induced by anaerobiosis gene gene2609 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13460 LI89_13465 LI89_13465 LI89_13465 2913313 2915079 + ribosomal protein S12 methylthiotransferase accessory factor YcaO gene gene2610 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13465 LI89_13470 LI89_13470 LI89_13470 2915725 2916582 + formate transporter gene gene2611 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13470 LI89_13475 LI89_13475 LI89_13475 2916635 2918917 + pyruvate formate-lyase formate acetyltransferase%3B catalyzes the formation of formate and acetyl-CoA from pyruvate gene gene2612 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13475 LI89_13480 LI89_13480 pflA pflA 2918996 2919736 + pyruvate formate lyase-activating enzyme 1 activates pyruvate formate-lyase 1 under anaerobic conditions gene gene2613 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13480 LI89_13485 LI89_13485 LI89_13485 2919814 2920962 - MFS transporter gene gene2614 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13485 LI89_13490 LI89_13490 LI89_13490 2921177 2922469 - seryl-tRNA synthetase gene gene2615 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13490 LI89_13495 LI89_13495 LI89_13495 2922641 2923984 - recombination factor protein RarA gene gene2616 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13495 LI89_13500 LI89_13500 lolA lolA 2923992 2924603 - lipoprotein chaperone participates with LolB in the incorporation of lipoprotein into the outer membrane gene gene2617 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13500 LI89_13505 LI89_13505 LI89_13505 2924713 2928333 - cell division protein FtsK gene gene2618 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13505 LI89_13510 LI89_13510 LI89_13510 2928455 2928949 - leucine-responsive transcriptional regulator mediates a global response to leucine%3B acts as a regulator for several genes involved in the high-affinity branched-chain amino acid transport system gene gene2619 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13510 LI89_13515 LI89_13515 LI89_13515 2929719 2930681 + thioredoxin reductase catalyzes the transfer of electrons from NADPH to thioredoxin%3B FAD/NAD(P) binding gene gene2620 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13515 LI89_13520 LI89_13520 LI89_13520 2930956 2932722 + amino acid ABC transporter permease in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance%3B important for cytochrome bd and c gene gene2621 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13520 LI89_13525 LI89_13525 LI89_13525 2932725 2934449 + amino acid ABC transporter permease in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance%3B important for cytochrome bd and c gene gene2622 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13525 LI89_13530 LI89_13530 LI89_13530 2934879 2935589 + leucyl/phenylalanyl-tRNA--protein transferase gene gene2623 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13530 LI89_13535 LI89_13535 LI89_13535 2935755 2935973 + translation initiation factor IF-1 gene gene2624 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13535 LI89_13540 LI89_13540 clpA clpA 2936218 2938494 - Clp protease ClpX ATPase and specificity subunit of the ClpA-ClpP ATP dependent serine protease%3B directs protease to specific substrates gene gene2625 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13540 LI89_13545 LI89_13545 clpS clpS 2938520 2938840 - Clp protease ClpS involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation%3B binds to the N-terminal domain of the chaperone ClpA gene gene2626 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13545 LI89_13550 LI89_13550 LI89_13550 2939200 2939457 + stationary phase/starvation inducible regulatory protein CspD inhibits DNA replication at both initiation and elongation steps%3B stationary phase and starvation inducible gene gene2627 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13550 LI89_13555 LI89_13555 LI89_13555 2939653 2941602 - macrolide transporter with MacA is involved in the export of macrolide gene gene2628 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13555 LI89_13560 LI89_13560 LI89_13560 2941602 2942714 - macrolide transporter confers macrolide resistance via active drug efflux gene gene2629 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13560 LI89_13565 LI89_13565 LI89_13565 2942906 2943889 + virulence factor gene gene2630 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13565 LI89_13570 LI89_13570 LI89_13570 2943886 2945550 - hypothetical protein gene gene2631 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13570 LI89_13575 LI89_13575 LI89_13575 2945804 2946703 + membrane protein gene gene2632 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13575 LI89_13580 LI89_13580 LI89_13580 2946900 2948552 + hydroxylamine reductase gene gene2633 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13580 LI89_13585 LI89_13585 LI89_13585 2948648 2949670 + HCP oxidoreductase gene gene2634 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13585 LI89_13590 LI89_13590 LI89_13590 2949906 2951627 + pyruvate dehydrogenase catalyzes the formation of acetate from pyruvate gene gene2635 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13590 LI89_13595 LI89_13595 LI89_13595 2951860 2952747 + methyltransferase gene gene2636 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13595 LI89_13600 LI89_13600 LI89_13600 2952886 2953905 + threonine aldolase low- specificity%3B catalyzes the formation of acetaldehyde and glycine from L-threonine%3B acts on L-threonine%2C L-allo-threonine%2C L-threo-phenylserine%2C and L-erythro-phenylserine gene gene2637 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13600 LI89_13605 LI89_13605 LI89_13605 2953902 2955359 + hypothetical protein gene gene2638 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13605 LI89_13610 LI89_13610 LI89_13610 2955491 2956501 + hypothetical protein gene gene2639 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13610 LI89_13615 LI89_13615 LI89_13615 2956570 2957145 + lipoprotein induced during stationary phase and by acivicin (a glutamine analog)%3B regulated by Lrp and RpoS gene gene2640 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13615 LI89_13620 LI89_13620 LI89_13620 2957436 2958164 + arginine ABC transporter ATP-binding protein gene gene2641 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13620 LI89_13625 LI89_13625 LI89_13625 2958185 2958916 + arginine ABC transporter substrate-binding protein with ArtPMQI is involved in arginine transport gene gene2642 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13625 LI89_13630 LI89_13630 LI89_13630 2958928 2959644 + arginine transporter permease subunit ArtQ with ArtPMJI transports arginine across the inner membrane gene gene2643 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13630 LI89_13635 LI89_13635 artM artM 2959644 2960312 + arginine transporter permease subunit ArtM with ArtPQJI acts to transport arginine across the inner membrane gene gene2644 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13635 LI89_13640 LI89_13640 LI89_13640 2960488 2960736 + hypothetical protein gene gene2645 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13640 LI89_13650 LI89_13650 LI89_13650 2961218 2961949 + arginine ABC transporter substrate-binding protein with ArtPMQI is involved in arginine transport gene gene2646 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13650 LI89_13655 LI89_13655 rumB rumB 2961977 2963107 - 23S rRNA methyltransferase RNA uridine methyltransferase B%3B catalyzes the formation of 5-methyl-uridine at position 747 in 23S rRNA gene gene2647 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13655 LI89_13660 LI89_13660 LI89_13660 2963196 2963672 - membrane protein gene gene2648 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13660 LI89_13665 LI89_13665 LI89_13665 2963822 2964667 - spermidine/putrescine ABC transporter permease gene gene2649 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13665 LI89_13670 LI89_13670 LI89_13670 2964664 2965629 - spermidine/putrescine ABC transporter permease gene gene2650 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13670 LI89_13675 LI89_13675 potG potG 2965666 2966799 - putrescine transporter ATP-binding subunit part of the PotFGHI ATP-dependent putrescine transporter gene gene2651 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13675 LI89_13680 LI89_13680 LI89_13680 2966966 2968075 - spermidine/putrescine ABC transporter substrate-binding protein gene gene2652 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13680 LI89_13685 LI89_13685 LI89_13685 2968521 2969009 - sensory transduction regulator gene gene2653 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13685 LI89_13690 LI89_13690 LI89_13690 2969128 2969436 - membrane protein gene gene2654 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13690 LI89_13695 LI89_13695 LI89_13695 2969751 2970014 + glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase%3B also involved in reducing some disulfides in a coupled system with glutathione reductase gene gene2655 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13695 LI89_13700 LI89_13700 LI89_13700 2970424 2972112 + transporter gene gene2656 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13700 LI89_13705 LI89_13705 LI89_13705 2972487 2973158 + phosphoesterase gene gene2657 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13705 LI89_13710 LI89_13710 LI89_13710 2973155 2973763 + UDP-diphosphatase gene gene2658 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13710 LI89_13715 LI89_13715 LI89_13715 2974039 2974710 + deoxyribose-phosphate aldolase gene gene2659 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13715 LI89_13720 LI89_13720 LI89_13720 2975083 2975847 + transcriptional regulator gene gene2660 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13720 LI89_13725 LI89_13725 LI89_13725 2977090 2978385 + serine/threonine protein kinase gene gene2661 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13725 LI89_13730 LI89_13730 LI89_13730 2978531 2979898 + serine dehydratase catalyzes the formation of pyruvate from serine gene gene2662 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13730 LI89_13735 LI89_13735 LI89_13735 2979960 2981153 - D-alanyl-D-alanine carboxypeptidase penicillin-binding protein 5%3B removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors gene gene2663 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13735 LI89_13740 LI89_13740 LI89_13740 2981578 2982945 + cystathionine beta-synthase gene gene2664 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13740 LI89_13745 LI89_13745 LI89_13745 2982971 2984116 + cystathionine beta-lyase gene gene2665 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13745 LI89_13750 LI89_13750 LI89_13750 2984180 2984620 - transcriptional regulator gene gene2666 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13750 LI89_13755 LI89_13755 LI89_13755 2984634 2984990 - hypothetical protein gene gene2667 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13755 LI89_13760 LI89_13760 LI89_13760 2985325 2985996 - metal ABC transporter permease gene gene2668 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13760 LI89_13765 LI89_13765 LI89_13765 2985993 2986979 - methionine ABC transporter ATP-binding protein gene gene2669 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13765 LI89_13770 LI89_13770 LI89_13770 2986976 2987800 - metal ABC transporter substrate-binding protein gene gene2670 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13770 LI89_13775 LI89_13775 LI89_13775 2987838 2988914 - 2-oxobutyrate oxidase gene gene2671 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13775 LI89_13780 LI89_13780 LI89_13780 2989369 2990028 + hydrolase gene gene2672 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13780 LI89_13785 LI89_13785 LI89_13785 2990047 2990667 + glutathione S-transferase gene gene2673 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13785 LI89_13790 LI89_13790 LI89_13790 2990846 2992819 - outer membrane siderophore receptor YiuR%3B outer membrane siderophore receptor gene gene2674 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13790 LI89_13795 LI89_13795 LI89_13795 2993043 2993831 - iron ABC transporter ATP-binding protein gene gene2675 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13795 LI89_13800 LI89_13800 LI89_13800 2993828 2994910 - iron-siderophore ABC transporter permease gene gene2676 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13800 LI89_13805 LI89_13805 LI89_13805 2995183 2996709 - lysine transporter gene gene2677 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13805 LI89_13810 LI89_13810 LI89_13810 2996954 2997826 - transcriptional regulator gene gene2678 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13810 LI89_13815 LI89_13815 LI89_13815 2998123 2998413 - hypothetical protein gene gene2679 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13815 LI89_13820 LI89_13820 LI89_13820 2998618 2999700 + membrane protein gene gene2680 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13820 LI89_13825 LI89_13825 LI89_13825 2999830 3000675 + endonuclease IV Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues gene gene2681 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13825 LI89_13830 LI89_13830 LI89_13830 3000730 3003240 - usher protein gene gene2682 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13830 LI89_13835 LI89_13835 LI89_13835 3003296 3004108 - molecular chaperone gene gene2683 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13835 LI89_13840 LI89_13840 LI89_13840 3004214 3004708 - hypothetical protein gene gene2684 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13840 LI89_13845 LI89_13845 LI89_13845 3004978 3005472 - protein psaF gene gene2685 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13845 LI89_13850 LI89_13850 LI89_13850 3005469 3006155 - protein psaE gene gene2686 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13850 LI89_13855 LI89_13855 LI89_13855 3006396 3008081 - PTS system fructose-specific transporter subunits IIBC phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel gene gene2687 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13855 LI89_13860 LI89_13860 fruK fruK 3008096 3009034 - 1-phosphofructokinase converts fructose-1-phosphate and ATP to fructose-1%2C6-bisphosphate and ADP%3B highly specific for fructose-1-phopshate%3B similar to PfkB%3B forms homodimers gene gene2688 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13860 LI89_13865 LI89_13865 LI89_13865 3009031 3010164 - bifunctional PTS system fructose-specific transporter subunit IIA/HPr protein phosphoenolpyruvate (PEP)-dependent%2C sugar transporting phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIA is phosphorylated by phospho-HPr which then transfers the phosphoryl group to the IIB component gene gene2689 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13865 LI89_13870 LI89_13870 LI89_13870 3010426 3010848 + ADP-ribose pyrophosphatase gene gene2690 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13870 LI89_13875 LI89_13875 LI89_13875 3011269 3012417 + cytochrome C gene gene2691 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13875 LI89_13880 LI89_13880 LI89_13880 3012431 3014911 + trimethylamine N-oxide reductase I catalytic subunit catalyzes the reduction of trimethylamine-N-oxide to form trimethylamine gene gene2692 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13880 LI89_13885 LI89_13885 LI89_13885 3015080 3015334 - hypothetical protein gene gene2693 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13885 LI89_13890 LI89_13890 LI89_13890 3015783 3017027 + tryptophan permease tryptophan transporter of high affinity gene gene2694 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13890 LI89_13895 LI89_13895 LI89_13895 3017140 3017712 + elongation factor P Stimulates the peptidyltransferase activity of the 70S ribosome and enhances dipeptide synthesis with N-formylmethionyl-tRNA and puromycin in vitro%2C suggesting its involvement in the formation of the first peptide bond of a protein gene gene2695 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13895 LI89_13900 LI89_13900 LI89_13900 3017900 3019090 - mannonate dehydratase catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate gene gene2696 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13900 LI89_13905 LI89_13905 LI89_13905 3019261 3019443 + hypothetical protein gene gene2697 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13905 LI89_13910 LI89_13910 LI89_13910 3019518 3020990 + D-mannonate oxidoreductase gene gene2698 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13910 LI89_13915 LI89_13915 LI89_13915 3021094 3021837 - transcriptional regulator regulates the expression of uxuBA gene gene2699 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13915 LI89_13920 LI89_13920 LI89_13920 3022045 3022371 - membrane protein gene gene2700 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13920 LI89_13925 LI89_13925 LI89_13925 3022684 3023667 + hypothetical protein gene gene2701 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13925 LI89_13930 LI89_13930 LI89_13930 3023731 3024432 + membrane protein gene gene2702 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13930 LI89_13935 LI89_13935 spr spr 3024811 3025395 + membrane protein mutational suppressor of prc thermosensitivity gene gene2703 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13935 LI89_13940 LI89_13940 hypothetical protein hypothetical protein 3025403 3025611 - disrupted pseudogene gene2704 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13940 LI89_13945 LI89_13945 LI89_13945 3025900 3027462 + phage resistance protein involved in resistance to the phages N4 and lambda gene gene2705 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13945 LI89_13950 LI89_13950 LI89_13950 3027561 3029369 + antibiotic ABC transporter substrate-binding protein with YejBEF is involved in resistance to microcin C gene gene2706 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13950 LI89_13955 LI89_13955 LI89_13955 3029379 3030479 + microcin ABC transporter permease with YejAEF is involved in resistance to microcin C gene gene2707 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13955 LI89_13960 LI89_13960 LI89_13960 3030476 3031504 + microcin ABC transporter permease part of the microcin C transport system gene gene2708 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13960 LI89_13965 LI89_13965 LI89_13965 3031506 3033098 + microcin ABC transporter ATP-binding protein with YejAEF is involved in resistance to microcin C gene gene2709 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13965 LI89_13970 LI89_13970 LI89_13970 3033170 3033517 - hypothetical protein gene gene2710 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13970 LI89_13975 LI89_13975 LI89_13975 3034234 3035457 - bicyclomycin/multidrug efflux system Involved in sulfonamide (sulfathiazole) and bicyclomycin resistance gene gene2711 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13975 LI89_13980 LI89_13980 LI89_13980 3035556 3036263 - 16S rRNA pseudouridylate synthase catalyzes the synthesis pseudouridine from uracil-516 in 16S ribosomal RNA gene gene2712 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13980 LI89_13985 LI89_13985 LI89_13985 3036604 3038376 + hypothetical protein gene gene2713 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13985 LI89_13990 LI89_13990 LI89_13990 3038538 3038822 + 50S ribosomal protein L25 the Ctc family of proteins consists of two types%2C one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response gene gene2714 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13990 LI89_13995 LI89_13995 LI89_13995 3038904 3039905 - nucleoid-associated protein NdpA gene gene2715 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_13995 LI89_14000 LI89_14000 LI89_14000 3040083 3040310 + hypothetical protein gene gene2716 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14000 LI89_14005 LI89_14005 LI89_14005 3040338 3042131 + membrane protein gene gene2717 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14005 LI89_14010 LI89_14010 LI89_14010 3042229 3042305 + tRNA-Pro tRNA gene2718 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14010 LI89_14015 LI89_14015 LI89_14015 3042659 3043690 + methyltransferase gene gene2719 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14015 LI89_14020 LI89_14020 LI89_14020 3044000 3044734 - carbonic anhydrase gene gene2720 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14020 LI89_14025 LI89_14025 LI89_14025 3045010 3046446 - aryl-phospho-beta-D-glucosidase gene gene2721 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14025 LI89_14030 LI89_14030 LI89_14030 3046535 3048076 - PTS-system permease gene gene2722 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14030 LI89_14035 LI89_14035 LI89_14035 3048242 3048982 - transcriptional regulator gene gene2723 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14035 LI89_14040 LI89_14040 LI89_14040 3049115 3049321 - hypothetical protein gene gene2724 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14040 LI89_14045 LI89_14045 LI89_14045 3049369 3049677 - hypothetical protein gene gene2725 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14045 LI89_14050 LI89_14050 LI89_14050 3049878 3050600 + peptidase S24 gene gene2726 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14050 LI89_14055 LI89_14055 LI89_14055 3050849 3051091 + virulence protein MsgA gene gene2727 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14055 LI89_14060 LI89_14060 LI89_14060 3051256 3052191 + protease gene gene2728 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14060 LI89_14065 LI89_14065 LI89_14065 3052518 3054305 + chemotaxis protein gene gene2729 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14065 LI89_14070 LI89_14070 LI89_14070 3054375 3055364 - beta-lactamase gene gene2730 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14070 LI89_14075 LI89_14075 LI89_14075 3055778 3057304 + major facilitator transporter gene gene2731 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14075 LI89_14080 LI89_14080 LI89_14080 3057484 3058626 + beta-lactam-binding protein this protein has no known enzymatic function gene gene2732 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14080 LI89_14085 LI89_14085 LI89_14085 3058718 3058793 - tRNA-Thr tRNA gene2733 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14085 LI89_14090 LI89_14090 LI89_14090 3058800 3058887 - tRNA-Ser tRNA gene2734 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14090 LI89_14100 LI89_14100 LI89_14100 3059141 3060241 - membrane protein gene gene2735 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14100 LI89_14105 LI89_14105 LI89_14105 3060908 3062077 - secretion protein HlyD gene gene2736 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14105 LI89_14110 LI89_14110 LI89_14110 3062090 3064225 - ATP-binding protein gene gene2737 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14110 LI89_14115 LI89_14115 LI89_14115 3064401 3065786 - CyaE gene gene2738 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14115 LI89_14120 LI89_14120 LI89_14120 3065850 3078515 - autotransporter adhesin gene gene2739 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14120 LI89_14125 LI89_14125 LI89_14125 3079206 3080360 + MFS transporter gene gene2740 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14125 LI89_14130 LI89_14130 LI89_14130 3080383 3083076 + tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase gene gene2741 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14130 LI89_14135 LI89_14135 LI89_14135 3083079 3083726 + transcriptional regulator two-component response regulator RscB regulates the genes involved in capsule biosynthesis and cell division%3B probably phosphorylated by RcsC or RcsF gene gene2742 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14135 LI89_14140 LI89_14140 LI89_14140 3083954 3086821 - histidine kinase gene gene2743 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14140 LI89_14145 LI89_14145 LI89_14145 3086946 3089600 - DNA gyrase subunit A gene gene2744 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14145 LI89_14150 LI89_14150 LI89_14150 3089745 3090473 + 3-demethylubiquinone-9 3-methyltransferase Involved in ubiquinone biosynthesis gene gene2745 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14150 LI89_14155 LI89_14155 LI89_14155 3090990 3093275 + ribonucleotide-diphosphate reductase subunit alpha Catalyzes the rate-limiting step in dNTP synthesis gene gene2746 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14155 LI89_14160 LI89_14160 LI89_14160 3093361 3094491 + ribonucleotide-diphosphate reductase subunit beta B2 or R2 protein%3B type 1a enzyme%3B catalyzes the rate-limiting step in dNTP synthesis%3B converts nucleotides to deoxynucleotides%3B forms a homodimer and then a multimeric complex with NrdA gene gene2747 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14160 LI89_14165 LI89_14165 LI89_14165 3094495 3094752 + 2Fe-2S ferredoxin gene gene2748 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14165 LI89_14170 LI89_14170 LI89_14170 3094849 3095355 + ecotin serine protease inhibitor%2C inhibits trypsin and other proteases gene gene2749 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14170 LI89_14175 LI89_14175 LI89_14175 3095446 3100860 - serine protease gene gene2750 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14175 LI89_14180 LI89_14180 LI89_14180 3100872 3101621 - hypothetical protein gene gene2751 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14180 LI89_14185 LI89_14185 LI89_14185 3101876 3103069 - hypothetical protein gene gene2752 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14185 LI89_14190 LI89_14190 LI89_14190 3103299 3104507 + tyrosine transporter TyrP tyrosine specific permease gene gene2753 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14190 LI89_14195 LI89_14195 LI89_14195 3104705 3105247 - porin gene gene2754 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14195 LI89_14200 LI89_14200 LI89_14200 3105601 3107043 + catalase gene gene2755 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14200 LI89_14210 LI89_14210 LI89_14210 3107743 3109152 - O-succinylbenzoic acid--CoA ligase gene gene2756 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14210 LI89_14215 LI89_14215 LI89_14215 3109140 3110111 - O-succinylbenzoate synthase catalyzes the dehydration of 2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylic acid to form O-succinylbenzoate gene gene2757 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14215 LI89_14220 LI89_14220 LI89_14220 3110111 3110968 - dihydroxynaphthoic acid synthetase catalyzes the formation of 1%2C4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA gene gene2758 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14220 LI89_14225 LI89_14225 LI89_14225 3110982 3111788 - 2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase gene gene2759 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14225 LI89_14230 LI89_14230 LI89_14230 3111785 3113458 - 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase SEPHCHC synthase%3B forms 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1-carboxylate from 2-oxoglutarate and isochorismate in menaquinone biosynthesis gene gene2760 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14230 LI89_14235 LI89_14235 LI89_14235 3113700 3115064 - isochorismate synthase gene gene2761 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14235 LI89_14240 LI89_14240 LI89_14240 3115280 3115588 - hypothetical protein gene gene2762 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14240 LI89_14245 LI89_14245 LI89_14245 3115831 3117642 - phosphogluconate dehydratase catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate gene gene2763 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14245 LI89_14250 LI89_14250 LI89_14250 3117652 3118158 - hypothetical protein gene gene2764 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14250 LI89_14255 LI89_14255 LI89_14255 3118221 3119537 - 2-ketogluconate transporter gene gene2765 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14255 LI89_14260 LI89_14260 LI89_14260 3119712 3120677 - dihydrofolate reductase gene gene2766 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14260 LI89_14265 LI89_14265 LI89_14265 3121060 3122052 - transcriptional regulator gene gene2767 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14265 LI89_14270 LI89_14270 LI89_14270 3122561 3123325 + gluconate 5-dehydrogenase Involved in the nonphosphorylative%2C ketogenic oxidation of glucose and oxidizes gluconate to 5-ketogluconate gene gene2768 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14270 LI89_14275 LI89_14275 idnK idnK 3123345 3123875 + gluconate kinase gene gene2769 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14275 LI89_14280 LI89_14280 LI89_14280 3123916 3124383 + hypothetical protein gene gene2770 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14280 LI89_14285 LI89_14285 LI89_14285 3125037 3125564 + hypothetical protein gene gene2771 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14285 LI89_14290 LI89_14290 LI89_14290 3125678 3126145 + hypothetical protein gene gene2772 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14290 LI89_14295 LI89_14295 LI89_14295 3126342 3126833 - membrane protein gene gene2773 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14295 LI89_14300 LI89_14300 LI89_14300 3126985 3127845 - hypothetical protein gene gene2774 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14300 LI89_14305 LI89_14305 LI89_14305 3128054 3129511 - NADH:ubiquinone oxidoreductase subunit N Catalyzes the transfer of electrons from NADH to quinone gene gene2775 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14305 LI89_14310 LI89_14310 LI89_14310 3129518 3131044 - NADH:ubiquinone oxidoreductase subunit M gene gene2776 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14310 LI89_14315 LI89_14315 LI89_14315 3131063 3132907 - NADH:ubiquinone oxidoreductase subunit L Catalyzes the transfer of electrons from NADH to ubiquinone gene gene2777 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14315 LI89_14320 LI89_14320 LI89_14320 3132904 3133206 - hypothetical protein gene gene2778 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14320 LI89_14325 LI89_14325 LI89_14325 3133203 3133748 - NADH:ubiquinone oxidoreductase subunit J Catalyzes the transfer of electrons from NADH to quinone gene gene2779 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14325 LI89_14330 LI89_14330 LI89_14330 3133761 3134303 - NADH dehydrogenase gene gene2780 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14330 LI89_14335 LI89_14335 LI89_14335 3134318 3135295 - NADH:ubiquinone oxidoreductase gene gene2781 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14335 LI89_14340 LI89_14340 LI89_14340 3135292 3138036 - NADH dehydrogenase Catalyzes the transfer of electrons from NADH to quinone gene gene2782 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14340 LI89_14345 LI89_14345 LI89_14345 3138120 3139487 - NADH dehydrogenase part of NADH-ubiquinone oxidoreductase complex I%3B shuttles electrons from NADH%2C via FMN and iron-sulfur (Fe-S) centers%2C to quinones in the respiratory chain%3B NuoF is part of the soluble NADH dehydrogenase fragment%2C which represents the electron input part of NADH dehydrogenase gene gene2783 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14345 LI89_14350 LI89_14350 LI89_14350 3139484 3140047 - NADH dehydrogenase Catalyzes the transfer of electrons from NADH to quinone gene gene2784 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14350 LI89_14355 LI89_14355 LI89_14355 3140050 3141846 - NADH:ubiquinone oxidoreductase NuoCD%3B NDH-1 shuttles electrons from NADH%2C via FMN and iron-sulfur (Fe-S) centers%2C to quinones in the respiratory chain%3B subunits NuoCD%2C E%2C F%2C and G constitute the peripheral sector of the complex%3B in Escherichia coli this gene encodes a fusion protein of NuoC and NuoD that are found separate in other organisms gene gene2785 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14355 LI89_14360 LI89_14360 LI89_14360 3141986 3142663 - NADH dehydrogenase gene gene2786 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14360 LI89_14365 LI89_14365 LI89_14365 3142786 3143277 - NADH:ubiquinone oxidoreductase subunit A gene gene2787 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14365 LI89_14370 LI89_14370 LI89_14370 3143954 3144886 - transcriptional regulator gene gene2788 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14370 LI89_14380 LI89_14380 LI89_14380 3146025 3147239 + aminotransferase broad specificity%3B family IV%3B in Corynebacterium glutamicum this protein can use glutamate%2C 2-aminobutyrate%2C and aspartate as amino donors and pyruvate as the acceptor gene gene2789 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14380 LI89_14390 LI89_14390 LI89_14390 3148028 3148621 + 5'-nucleotidase gene gene2790 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14390 LI89_14395 LI89_14395 LI89_14395 3148812 3150647 - citrate transporter gene gene2791 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14395 LI89_14400 LI89_14400 LI89_14400 3151011 3151808 + hypothetical protein gene gene2792 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14400 LI89_14405 LI89_14405 LI89_14405 3152195 3152851 - phosphatase gene gene2793 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14405 LI89_14410 LI89_14410 LI89_14410 3152898 3153392 - hypothetical protein gene gene2794 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14410 LI89_14415 LI89_14415 LI89_14415 3153561 3154016 - hypothetical protein gene gene2795 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14415 LI89_14420 LI89_14420 LI89_14420 3154449 3155651 + acetate kinase AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation%3B utilizes magnesium and ATP%3B also involved in conversion of acetate to aceyl-CoA%3B also known to act on propionate gene gene2796 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14420 LI89_14425 LI89_14425 LI89_14425 3155823 3157961 + phosphate acetyltransferase catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate%3B when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate gene gene2797 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14425 LI89_14430 LI89_14430 LI89_14430 3158540 3159565 - LacI family transcriptional regulator gene gene2798 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14430 LI89_14435 LI89_14435 cmtB cmtB 3159811 3160254 + PTS system mannitol-specific transporter subunit IIA TolM%3B with CmtA (IIBC)%2C CmtB possibly forms the mannitol-like permease component of the cryptic mannitol phosphotransferase system%2C which phosphorylates and transports various carbohydrates and polyhydric alcohols in Escherichia coli%3B cytoplasmic protein gene gene2799 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14435 LI89_14440 LI89_14440 LI89_14440 3160297 3160584 + PTS ascorbate transporter subunit IIB gene gene2800 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14440 LI89_14445 LI89_14445 LI89_14445 3160597 3161853 + PTS beta-glucoside transporter subunit IIBC gene gene2801 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14445 LI89_14450 LI89_14450 LI89_14450 3161920 3162468 - NUDIX hydrolase gene gene2802 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14450 LI89_14455 LI89_14455 LI89_14455 3162540 3163094 - phosphodiesterase gene gene2803 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14455 LI89_14460 LI89_14460 LI89_14460 3163331 3164023 - diguanylate phosphodiesterase gene gene2804 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14460 LI89_14465 LI89_14465 LI89_14465 3164532 3165440 + epimerase gene gene2805 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14465 LI89_14470 LI89_14470 LI89_14470 3165556 3166329 - amino acid transporter gene gene2806 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14470 LI89_14475 LI89_14475 LI89_14475 3166389 3167105 - amino acid ABC transporter permease with HisJPQ is involved in transport of histidine%2C lysine%2C arginine and ornithine gene gene2807 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14475 LI89_14480 LI89_14480 LI89_14480 3167102 3167788 - amino acid ABC transporter permease with HisJMP is involved in the transport of histidine/lysine/arginine/ornithine gene gene2808 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14480 LI89_14485 LI89_14485 LI89_14485 3167893 3168675 - histidine ABC transporter substrate-binding protein HisJ with HisPMQ is involved in the transport of histidine gene gene2809 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14485 LI89_14495 LI89_14495 LI89_14495 3168984 3169556 - 3-octaprenyl-4-hydroxybenzoate carboxy-lyase catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate gene gene2810 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14495 LI89_14500 LI89_14500 LI89_14500 3169890 3171407 - amidophosphoribosyltransferase Catalyzes first step of the de novo purine nucleotide biosynthetic pathway gene gene2811 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14500 LI89_14505 LI89_14505 LI89_14505 3171420 3171929 - colicin V production protein membrane protein required for colicin V production gene gene2812 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14505 LI89_14510 LI89_14510 LI89_14510 3172120 3172854 - cell division protein DedD gene gene2813 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14510 LI89_14515 LI89_14515 LI89_14515 3172894 3174162 - bifunctional folylpolyglutamate synthase/ dihydrofolate synthase gene gene2814 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14515 LI89_14525 LI89_14525 LI89_14525 3174398 3175309 - acetyl-CoA carboxylase subunit beta catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer of AccA2D2 subunits gene gene2815 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14525 LI89_14530 LI89_14530 LI89_14530 3175540 3176202 - hypothetical protein gene gene2816 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14530 LI89_14535 LI89_14535 truA truA 3176334 3177176 - tRNA pseudouridine synthase A mediates pseudouridylation (positions 38%2C 39%2C 40) at the tRNA anticodon region which contributes to the structural stability gene gene2817 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14535 LI89_14540 LI89_14540 LI89_14540 3177176 3178186 - semialdehyde dehydrogenase gene gene2818 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14540 LI89_14545 LI89_14545 LI89_14545 3178379 3179512 - phosphoglycerate dehydrogenase gene gene2819 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14545 LI89_14550 LI89_14550 LI89_14550 3179673 3180458 - AraC family transcriptional regulator gene gene2820 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14550 LI89_14555 LI89_14555 LI89_14555 3180601 3181485 + multidrug DMT transporter gene gene2821 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14555 LI89_14560 LI89_14560 LI89_14560 3181492 3182535 - membrane protein gene gene2822 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14560 LI89_14570 LI89_14570 LI89_14570 3182717 3184183 + GntR family transcriptional regulator gene gene2823 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14570 LI89_14575 LI89_14575 LI89_14575 3184229 3184729 - alkyl hydroperoxide reductase gene gene2824 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14575 LI89_14580 LI89_14580 LI89_14580 3184726 3185451 - copper-sensitivity protein C gene gene2825 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14580 LI89_14585 LI89_14585 LI89_14585 3185448 3187508 - protein-disulfide reductase gene gene2826 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14585 LI89_14590 LI89_14590 LI89_14590 3187559 3187912 - copper resistance protein gene gene2827 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14590 LI89_14595 LI89_14595 LI89_14595 3188215 3189252 + flagella biosynthesis regulator gene gene2828 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14595 LI89_14600 LI89_14600 LI89_14600 3189319 3190452 - membrane protein gene gene2829 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14600 LI89_14605 LI89_14605 LI89_14605 3190568 3191869 - glucose-1-phosphatase gene gene2830 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14605 LI89_14610 LI89_14610 LI89_14610 3192151 3193107 - LacI family transcriptional regulator gene gene2831 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14610 LI89_14615 LI89_14615 LI89_14615 3193459 3193773 + PTS lactose transporter subunit IIB gene gene2832 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14615 LI89_14620 LI89_14620 LI89_14620 3193786 3195117 + cytochrome C biogenesis protein CcmF gene gene2833 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14620 LI89_14625 LI89_14625 LI89_14625 3195134 3196516 + 6-phospho-beta-glucosidase gene gene2834 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14625 LI89_14630 LI89_14630 LI89_14630 3196531 3196833 + molecular chaperone TorD gene gene2835 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14630 LI89_14635 LI89_14635 LI89_14635 3197015 3198409 + LamB gene gene2836 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14635 LI89_14640 LI89_14640 LI89_14640 3198594 3199292 + aspartate racemase gene gene2837 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14640 LI89_14645 LI89_14645 LI89_14645 3199330 3200337 - histidine kinase gene gene2838 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14645 LI89_14650 LI89_14650 LI89_14650 3200757 3201980 - 3-oxoacyl-ACP synthase FabB%2C beta-Ketoacyl-ACP synthase I%2C KASI%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP gene gene2839 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14650 LI89_14655 LI89_14655 mnmC mnmC 3202152 3204233 + FAD-dependent oxidoreductase 5-methylaminomethyl-2-thiouridine-forming enzyme methyltransferase/FAD-dependent demodification enzyme gene gene2840 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14655 LI89_14660 LI89_14660 LI89_14660 3204370 3204675 - hypothetical protein gene gene2841 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14660 LI89_14665 LI89_14665 LI89_14665 3204737 3205279 - elongation factor P hydroxylase gene gene2842 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14665 LI89_14670 LI89_14670 LI89_14670 3205363 3206169 - hypothetical protein gene gene2843 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14670 LI89_14675 LI89_14675 mepA mepA 3206173 3207000 - murein endopeptidase D-alanyl-D-alanine endopeptidase%3B functions in hydrolyzing cell wall peptidoglycan%3B similar to LAS metallopeptidases%3B forms a dimer in periplasm gene gene2844 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14675 LI89_14680 LI89_14680 LI89_14680 3207006 3208091 - chorismate synthase catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis gene gene2845 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14680 LI89_14685 LI89_14685 LI89_14685 3208168 3209100 - SAM-dependent methyltransferase involved in methylation of ribosomal protein L3 gene gene2846 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14685 LI89_14695 LI89_14695 LI89_14695 3209307 3209837 + hypothetical protein gene gene2847 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14695 LI89_14700 LI89_14700 LI89_14700 3209964 3210455 - phosphohistidine phosphatase gene gene2848 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14700 LI89_14705 LI89_14705 fadJ fadJ 3210838 3213075 - multifunctional fatty acid oxidation complex subunit alpha multifunctional enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase%3B catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA%3B exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities: forms a heterotetramer with FadI%3B similar to FadA2B2 complex%3B involved in the anaerobic degradation of long and medium-chain fatty acids in the presence of nitrate gene gene2849 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14705 LI89_14710 LI89_14710 LI89_14710 3213075 3214385 - 3-ketoacyl-CoA thiolase gene gene2850 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14710 LI89_14715 LI89_14715 LI89_14715 3214695 3215006 - hypothetical protein gene gene2851 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14715 LI89_14720 LI89_14720 LI89_14720 3215436 3216701 + long-chain fatty acid outer membrane transporter gene gene2852 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14720 LI89_14725 LI89_14725 LI89_14725 3216770 3217132 - MazF family transcriptional regulator gene gene2853 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14725 LI89_14730 LI89_14730 LI89_14730 3217132 3217380 - cell growth regulatory protein MazE gene gene2854 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14730 LI89_14735 LI89_14735 LI89_14735 3217498 3218262 - ABC transporter permease involved in maintaining OM lipid asymmetry gene gene2855 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14735 LI89_14740 LI89_14740 LI89_14740 3218299 3219519 - cytochrome C gene gene2856 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14740 LI89_14745 LI89_14745 LI89_14745 3219519 3220025 - cytochrome C gene gene2857 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14745 LI89_14750 LI89_14750 LI89_14750 3220022 3220588 - thiol:disulfide interchange protein DsbE cytochrome c-type biogenesis thioredoxin%3B involved in the reduction of disulfide bonds to allow heme bonding gene gene2858 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14750 LI89_14755 LI89_14755 LI89_14755 3220588 3222555 - cytochrome C biogenesis protein CcmF cytochrome c-type biogenesis protein%3B required for the transfer of heme to apocytochrome c gene gene2859 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14755 LI89_14760 LI89_14760 LI89_14760 3222552 3223046 - cytochrome C biogenesis protein CcmE CycJ%3B periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes%3B requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome%3B part of the cytochrome c maturation system%3B periplasmic protein anchored to the inner membrane gene gene2860 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14760 LI89_14765 LI89_14765 LI89_14765 3223043 3223291 - heme exporter protein D gene gene2861 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14765 LI89_14770 LI89_14770 LI89_14770 3223288 3224025 - heme ABC transporter permease with CcmABDE is involved in the transport of protoheme IX%3B CcmC is required for heme transfer to CcmE gene gene2862 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14770 LI89_14780 LI89_14780 LI89_14780 3224213 3224872 - heme ABC transporter permease with CcmABCE is involved in the transport of protoheme IX%3B CcmB is required for the release of holoCcmE from CcmC gene gene2863 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14780 LI89_14785 LI89_14785 LI89_14785 3224872 3225498 - cytochrome C biogenesis protein CcmA gene gene2864 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14785 LI89_14790 LI89_14790 LI89_14790 3225772 3226683 + membrane protein gene gene2865 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14790 LI89_14795 LI89_14795 LI89_14795 3226856 3226930 + tRNA-Arg tRNA gene2866 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14795 LI89_14800 LI89_14800 LI89_14800 3227243 3227512 - hypothetical protein gene gene2867 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14800 LI89_14805 LI89_14805 LI89_14805 3227595 3228725 - ABC transporter permease gene gene2868 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14805 LI89_14810 LI89_14810 LI89_14810 3228725 3229873 - antibiotic ABC transporter permease gene gene2869 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14810 LI89_14815 LI89_14815 LI89_14815 3229861 3230844 - secretion protein HlyD gene gene2870 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14815 LI89_14820 LI89_14820 LI89_14820 3231090 3232205 + membrane protein gene gene2871 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14820 LI89_14825 LI89_14825 LI89_14825 3232256 3232669 + hypothetical protein gene gene2872 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14825 LI89_14830 LI89_14830 LI89_14830 3233027 3234007 + AraC family transcriptional regulator gene gene2873 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14830 LI89_14835 LI89_14835 LI89_14835 3234086 3235096 + glyceraldehyde-3-phosphate dehydrogenase gene gene2874 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14835 LI89_14840 LI89_14840 LI89_14840 3235224 3235850 - hypothetical protein gene gene2875 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14840 LI89_14845 LI89_14845 LI89_14845 3236031 3237218 - hypothetical protein gene gene2876 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14845 LI89_14850 LI89_14850 LI89_14850 3237221 3239809 - fimbrial assembly protein gene gene2877 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14850 LI89_14855 LI89_14855 LI89_14855 3239869 3240633 - fimbrial chaperone protein gene gene2878 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14855 LI89_14860 LI89_14860 LI89_14860 3240630 3241367 - pilus assembly protein PapD gene gene2879 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14860 LI89_14865 LI89_14865 LI89_14865 3241375 3241938 - hypothetical protein gene gene2880 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14865 LI89_14870 LI89_14870 LI89_14870 3241913 3242629 - pilus assembly protein PapD gene gene2881 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14870 LI89_14875 LI89_14875 LI89_14875 3242691 3243242 - hypothetical protein gene gene2882 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14875 LI89_14880 LI89_14880 LI89_14880 3244558 3246246 + hemolysin activator/exporter gene gene2883 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14880 LI89_14890 LI89_14890 LI89_14890 3255492 3255797 + hypothetical protein gene gene2884 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14890 LI89_14900 LI89_14900 hypothetical protein hypothetical protein 3256022 3257053 + disrupted pseudogene gene2885 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14900 LI89_14905 LI89_14905 LI89_14905 3257905 3258417 + hypothetical protein gene gene2886 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14905 LI89_14910 LI89_14910 LI89_14910 3258458 3258784 - endoribonuclease gene gene2887 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14910 LI89_14920 LI89_14920 LI89_14920 3260867 3261145 + hypothetical protein gene gene2888 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14920 LI89_14925 LI89_14925 LI89_14925 3261184 3261411 + hypothetical protein gene gene2889 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14925 LI89_14935 LI89_14935 LI89_14935 3263400 3263621 + hypothetical protein gene gene2890 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14935 LI89_14945 LI89_14945 LI89_14945 3265514 3265771 + hypothetical protein gene gene2891 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14945 LI89_14960 LI89_14960 LI89_14960 3266206 3266664 + hypothetical protein gene gene2892 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14960 LI89_14975 LI89_14975 LI89_14975 3267010 3267309 + hypothetical protein gene gene2893 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14975 LI89_14980 LI89_14980 LI89_14980 3267447 3267776 - hypothetical protein gene gene2894 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14980 LI89_14985 LI89_14985 membrane protein membrane protein 3267923 3268693 - disrupted pseudogene gene2895 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14985 LI89_14990 LI89_14990 LI89_14990 3268713 3269222 + hypothetical protein gene gene2896 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_14990 LI89_15000 LI89_15000 LI89_15000 3269605 3269943 + hypothetical protein gene gene2897 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15000 LI89_15005 LI89_15005 LI89_15005 3270223 3270849 + PadR family transcriptional regulator gene gene2898 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15005 LI89_15010 LI89_15010 LI89_15010 3270849 3271160 + PF12977 structural domain protein gene gene2899 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15010 LI89_15015 LI89_15015 LI89_15015 3271253 3272683 - 6-phospho-beta-glucosidase gene gene2900 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15015 LI89_15020 LI89_15020 LI89_15020 3272699 3274156 - PTS system cellobiose/arbutin/salicin-specific transporter subunits IIBC phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel gene gene2901 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15020 LI89_15025 LI89_15025 LI89_15025 3274500 3275531 + transcriptional regulator gene gene2902 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15025 LI89_15030 LI89_15030 LI89_15030 3275598 3276176 - hypothetical protein gene gene2903 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15030 LI89_15035 LI89_15035 LI89_15035 3276202 3276756 - cytochrome B561 gene gene2904 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15035 LI89_15040 LI89_15040 LI89_15040 3277051 3278064 + alpha/beta hydrolase gene gene2905 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15040 LI89_15045 LI89_15045 LI89_15045 3278155 3278949 + regulatory protein gene gene2906 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15045 LI89_15050 LI89_15050 LI89_15050 3278990 3279625 - ABC transporter gene gene2907 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15050 LI89_15055 LI89_15055 LI89_15055 3279622 3280563 - ABC transporter permease gene gene2908 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15055 LI89_15060 LI89_15060 LI89_15060 3280564 3281370 - iron ABC transporter ATP-binding protein gene gene2909 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15060 LI89_15065 LI89_15065 LI89_15065 3281364 3282509 - ABC transporter permease gene gene2910 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15065 LI89_15070 LI89_15070 LI89_15070 3282718 3284211 - major facilitator transporter gene gene2911 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15070 LI89_15075 LI89_15075 LI89_15075 3284318 3284935 + TetR family transcriptional regulator gene gene2912 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15075 LI89_15080 LI89_15080 LI89_15080 3285095 3286825 + amidohydrolase gene gene2913 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15080 LI89_15085 LI89_15085 LI89_15085 3287075 3288415 + Putrescine importer PuuP gene gene2914 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15085 LI89_15090 LI89_15090 LI89_15090 3288469 3289548 - murein hydrolase effector LrgB membrane-bound lytic murein transglycosylase B%3B catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine in peptidoglycan gene gene2915 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15090 LI89_15095 LI89_15095 LI89_15095 3289860 3290876 + iron ABC transporter substrate-binding protein gene gene2916 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15095 LI89_15100 LI89_15100 LI89_15100 3290963 3292549 + iron ABC transporter permease gene gene2917 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15100 LI89_15105 LI89_15105 LI89_15105 3292546 3293595 + amino acid ABC transporter substrate-binding protein gene gene2918 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15105 LI89_15110 LI89_15110 LI89_15110 3293717 3294355 + membrane protein gene gene2919 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15110 LI89_15115 LI89_15115 LI89_15115 3294381 3294911 - membrane protein gene gene2920 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15115 LI89_15120 LI89_15120 LI89_15120 3295011 3296408 - 6-phospho-beta-glucosidase gene gene2921 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15120 LI89_15125 LI89_15125 LI89_15125 3296430 3298319 - PTS beta-glucoside transporter subunit IIABC phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel gene gene2922 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15125 LI89_15130 LI89_15130 LI89_15130 3298500 3299345 - transcription antiterminator LicT gene gene2923 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15130 LI89_15140 LI89_15140 LI89_15140 3299802 3300233 + antitoxin HicB gene gene2924 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15140 LI89_15145 LI89_15145 LI89_15145 3300649 3301173 - cytochrome B gene gene2925 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15145 LI89_15150 LI89_15150 LI89_15150 3301344 3302579 - glutamate-pyruvate aminotransferase gene gene2926 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15150 LI89_15155 LI89_15155 LI89_15155 3302714 3303229 - GCN5 family acetyltransferase gene gene2927 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15155 LI89_15160 LI89_15160 LI89_15160 3303487 3304734 + hypothetical protein gene gene2928 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15160 LI89_15165 LI89_15165 LI89_15165 3304905 3306605 + membrane protein gene gene2929 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15165 LI89_15170 LI89_15170 LI89_15170 3306609 3307349 + LytTR family transcriptional regulator gene gene2930 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15170 LI89_15175 LI89_15175 LI89_15175 3307573 3308817 + membrane protein gene gene2931 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15175 LI89_15180 LI89_15180 glk glk 3308889 3309860 - glucokinase catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate gene gene2932 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15180 LI89_15185 LI89_15185 LI89_15185 3310046 3310522 - Na(+)-translocating NADH-quinone reductase subunit E gene gene2933 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15185 LI89_15190 LI89_15190 LI89_15190 3310624 3311511 + transcriptional regulator gene gene2934 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15190 LI89_15195 LI89_15195 LI89_15195 3311483 3313144 - indolepyruvate decarboxylase thiamindiphosphate-dependent%3B catalyzes the formation of indoleacetaldehyde from indolepyruvate gene gene2935 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15195 LI89_15200 LI89_15200 LI89_15200 3313365 3314354 + L-glyceraldehyde 3-phosphate reductase gene gene2936 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15200 LI89_15205 LI89_15205 LI89_15205 3314639 3314953 + hypothetical protein gene gene2937 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15205 LI89_15210 LI89_15210 LI89_15210 3315004 3316233 - manganese transport protein MntH gene gene2938 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15210 LI89_15215 LI89_15215 LI89_15215 3316631 3317815 + nucleoside permease gene gene2939 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15215 LI89_15220 LI89_15220 LI89_15220 3318346 3318421 - tRNA-Lys tRNA gene2940 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15220 LI89_15225 LI89_15225 LI89_15225 3318448 3318523 - tRNA-Val tRNA gene2941 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15225 LI89_15230 LI89_15230 LI89_15230 3318562 3318637 - tRNA-Val tRNA gene2942 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15230 LI89_15235 LI89_15235 LI89_15235 3318691 3318766 - tRNA-Val tRNA gene2943 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15235 LI89_15240 LI89_15240 gltX gltX 3319028 3320443 + glutamyl-tRNA ligase catalyzes a two-step reaction%2C first charging an glutamate molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B contains discriminating and non-discriminating subtypes gene gene2944 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15240 LI89_15245 LI89_15245 LI89_15245 3320446 3320574 - Fur family transcriptional regulator gene gene2945 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15245 LI89_15250 LI89_15250 LI89_15250 3320614 3320689 + tRNA-Ala tRNA gene2946 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15250 LI89_15255 LI89_15255 LI89_15255 3320769 3320844 + tRNA-Ala tRNA gene2947 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15255 LI89_15260 LI89_15260 LI89_15260 3320953 3321513 + nitrate reductase gene gene2948 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15260 LI89_15265 LI89_15265 LI89_15265 3321670 3322011 + flxA gene gene2949 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15265 LI89_15270 LI89_15270 LI89_15270 3322087 3322302 - cytoplasmic protein gene gene2950 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15270 LI89_15275 LI89_15275 ligA ligA 3322317 3324335 - NAD-dependent DNA ligase LigA this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction%3B essential for DNA replication and repair of damaged DNA%3B similar to ligase LigB gene gene2951 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15275 LI89_15280 LI89_15280 LI89_15280 3324411 3325394 - cell division protein ZipA gene gene2952 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15280 LI89_15285 LI89_15285 LI89_15285 3325614 3326381 + sulfate transporter gene gene2953 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15285 LI89_15290 LI89_15290 LI89_15290 3326571 3327539 + cysteine synthase gene gene2954 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15290 LI89_15295 LI89_15295 LI89_15295 3327991 3328248 + PTS sugar transporter gene gene2955 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15295 LI89_15300 LI89_15300 LI89_15300 3328296 3330023 + phosphoenolpyruvate-protein phosphotransferase Phosphotransferase system%2C enzyme I%3B transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein%3B part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS)%2C a major carbohydrate active-transport system gene gene2956 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15300 LI89_15305 LI89_15305 LI89_15305 3330072 3330581 + PTS system glucose-specific transporter subunit IIA phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel gene gene2957 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15305 LI89_15310 LI89_15310 LI89_15310 3330633 3332000 - histidine kinase gene gene2958 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15310 LI89_15315 LI89_15315 LI89_15315 3332026 3332709 - CpxR gene gene2959 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15315 LI89_15320 LI89_15320 LI89_15320 3332898 3334106 + hemolysin secretion protein D gene gene2960 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15320 LI89_15325 LI89_15325 LI89_15325 3334110 3336092 + macrolide transporter with MacA is involved in the export of macrolide gene gene2961 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15325 LI89_15330 LI89_15330 cysM cysM 3336159 3337040 - cysteine synthase catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide gene gene2962 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15330 LI89_15335 LI89_15335 LI89_15335 3337214 3338305 - sulfate/thiosulfate transporter subunit gene gene2963 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15335 LI89_15340 LI89_15340 cysW cysW 3338295 3339170 - sulfate/thiosulfate transporter permease subunit Part of the ABC transporter complex cysAWTP involved in sulfate/thiosulfate import gene gene2964 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15340 LI89_15345 LI89_15345 LI89_15345 3339170 3340006 - sulfate/thiosulfate transporter subunit gene gene2965 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15345 LI89_15350 LI89_15350 LI89_15350 3340006 3341034 - thiosulfate transporter subunit gene gene2966 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15350 LI89_15355 LI89_15355 LI89_15355 3341306 3342832 - sialic acid transporter gene gene2967 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15355 LI89_15360 LI89_15360 LI89_15360 3343187 3344065 - N-acetylmannosamine kinase gene gene2968 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15360 LI89_15365 LI89_15365 LI89_15365 3344261 3344725 - sugar isomerase gene gene2969 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15365 LI89_15370 LI89_15370 LI89_15370 3344753 3345667 - N-acetylmannosamine kinase catalyzes the phosphorylation of the N-acetylmannosamine (ManNAc) liberated from N-acetyl-neuraminic acid by the nanA protein gene gene2970 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15370 LI89_15375 LI89_15375 LI89_15375 3345977 3346612 + N-acetylmannosamine-6-phosphate 2-epimerase Converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate gene gene2971 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15375 LI89_15380 LI89_15380 LI89_15380 3346694 3347584 + N-acetylneuraminate lyase gene gene2972 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15380 LI89_15385 LI89_15385 LI89_15385 3347657 3348562 - peroxidase gene gene2973 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15385 LI89_15390 LI89_15390 LI89_15390 3348737 3349348 - RpoE-regulated lipoprotein gene gene2974 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15390 LI89_15400 LI89_15400 LI89_15400 3349731 3350144 + hypothetical protein gene gene2975 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15400 LI89_15405 LI89_15405 LI89_15405 3350416 3350907 + hypothetical protein gene gene2976 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15405 LI89_15410 LI89_15410 LI89_15410 3351033 3351458 - acetyltransferase gene gene2977 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15410 LI89_15415 LI89_15415 LI89_15415 3351689 3352630 + coproporphyrinogen III oxidase catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis gene gene2978 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15415 LI89_15420 LI89_15420 LI89_15420 3352630 3353088 + hypothetical protein gene gene2979 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15420 LI89_15425 LI89_15425 LI89_15425 3353200 3354102 + LysR family transcriptional regulator gene gene2980 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15425 LI89_15430 LI89_15430 LI89_15430 3354109 3354792 - LuxR family transcriptional regulator gene gene2981 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15430 LI89_15435 LI89_15435 LI89_15435 3355262 3357541 - malic enzyme NADP-dependent%3B catalyzes the oxidative decarboxylation of malate to form pyruvate%3B decarboxylates oxaloacetate gene gene2982 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15435 LI89_15445 LI89_15445 LI89_15445 3357758 3358333 - GDP-mannose pyrophosphatase gene gene2983 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15445 LI89_15450 LI89_15450 LI89_15450 3358476 3359075 - cytochrome C with NapABDFGH functions as a nitrate reductase%3B NapC functions as an electron shuttle between NapAB and NapGH or quinone gene gene2984 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15450 LI89_15455 LI89_15455 napB napB 3359103 3359570 - nitrate reductase small subunit of periplasmic nitrate reductase%3B receives electrons from the membrane-bound NapC and passes them to NapA gene gene2985 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15455 LI89_15460 LI89_15460 LI89_15460 3359640 3362135 - nitrate reductase periplasmic%3B catalytic subunit%3B with NapBC catalyzes the reduction of nitrate to nitrite%3B NapAB receives electrons from NapC gene gene2986 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15460 LI89_15465 LI89_15465 LI89_15465 3362132 3362398 - nitrate reductase gene gene2987 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15465 LI89_15470 LI89_15470 LI89_15470 3362388 3362891 - ferredoxin gene gene2988 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15470 LI89_15475 LI89_15475 LI89_15475 3363396 3364025 + transcriptional regulator NarP nitrate/nitrite response regulator NarP%3B NarP is phosphorylated by NarX and NarQ and can activate fdnG and nitrite or nitrate reductase systems%3B represses expression of other anaerobic genes gene gene2989 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15475 LI89_15480 LI89_15480 LI89_15480 3364056 3364334 - hypothetical protein gene gene2990 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15480 LI89_15485 LI89_15485 LI89_15485 3364612 3367743 + multidrug transporter gene gene2991 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15485 LI89_15495 LI89_15495 LI89_15495 3368350 3369564 + hypothetical protein gene gene2992 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15495 LI89_15500 LI89_15500 LI89_15500 3370023 3370496 + hypothetical protein gene gene2993 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15500 LI89_15510 LI89_15510 LI89_15510 3370839 3371060 - hypothetical protein gene gene2994 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15510 LI89_15515 LI89_15515 LI89_15515 3371148 3371855 - methyltransferase gene gene2995 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15515 LI89_15520 LI89_15520 LI89_15520 3371906 3373219 + hypothetical protein gene gene2996 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15520 LI89_15530 LI89_15530 LI89_15530 3373861 3374154 - hypothetical protein gene gene2997 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15530 LI89_15535 LI89_15535 LI89_15535 3374129 3374503 - hypothetical protein gene gene2998 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15535 LI89_15545 LI89_15545 LI89_15545 3375116 3375541 - hypothetical protein gene gene2999 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15545 LI89_15550 LI89_15550 LI89_15550 3375544 3375996 - lysozyme gene gene3000 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15550 LI89_15555 LI89_15555 LI89_15555 3376108 3376368 - hypothetical protein gene gene3001 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15555 LI89_15560 LI89_15560 LI89_15560 3376412 3379855 - hypothetical protein gene gene3002 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15560 LI89_15565 LI89_15565 LI89_15565 3379857 3380264 - hypothetical protein gene gene3003 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15565 LI89_15570 LI89_15570 LI89_15570 3380276 3380905 - hypothetical protein gene gene3004 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15570 LI89_15575 LI89_15575 LI89_15575 3380907 3381470 - hypothetical protein gene gene3005 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15575 LI89_15580 LI89_15580 LI89_15580 3381546 3383795 - hypothetical protein gene gene3006 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15580 LI89_15585 LI89_15585 LI89_15585 3383782 3384066 - hypothetical protein gene gene3007 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15585 LI89_15590 LI89_15590 LI89_15590 3384134 3384436 - hypothetical protein gene gene3008 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15590 LI89_15595 LI89_15595 LI89_15595 3384436 3384897 - hypothetical protein gene gene3009 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15595 LI89_15600 LI89_15600 LI89_15600 3385038 3385499 - hypothetical protein gene gene3010 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15600 LI89_15605 LI89_15605 LI89_15605 3385503 3385907 - hypothetical protein gene gene3011 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15605 LI89_15610 LI89_15610 LI89_15610 3385904 3386176 - hypothetical protein gene gene3012 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15610 LI89_15615 LI89_15615 LI89_15615 3386180 3388009 - hypothetical protein gene gene3013 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15615 LI89_15625 LI89_15625 LI89_15625 3389514 3389987 - hypothetical protein gene gene3014 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15625 LI89_15630 LI89_15630 LI89_15630 3390006 3391886 - hypothetical protein gene gene3015 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15630 LI89_15640 LI89_15640 LI89_15640 3392429 3393007 + hypothetical protein gene gene3016 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15640 LI89_15645 LI89_15645 LI89_15645 3393430 3394707 + DNA polymerase gene gene3017 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15645 LI89_15650 LI89_15650 LI89_15650 3394928 3395578 + hypothetical protein gene gene3018 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15650 LI89_15655 LI89_15655 LI89_15655 3395575 3396189 + hypothetical protein gene gene3019 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15655 LI89_15660 LI89_15660 LI89_15660 3396704 3398104 - hypothetical protein gene gene3020 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15660 LI89_15680 LI89_15680 LI89_15680 3399273 3401003 - hypothetical protein gene gene3021 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15680 LI89_15685 LI89_15685 LI89_15685 3401002 3401424 + reductase gene gene3022 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15685 LI89_15690 LI89_15690 LI89_15690 3401426 3402553 + succinyl-diaminopimelate desuccinylase gene gene3023 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15690 LI89_15695 LI89_15695 LI89_15695 3402550 3403254 + peptidase M15 gene gene3024 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15695 LI89_15700 LI89_15700 LI89_15700 3403289 3403483 + hypothetical protein gene gene3025 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15700 LI89_15705 LI89_15705 LI89_15705 3403510 3404145 - hydrolase gene gene3026 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15705 LI89_15710 LI89_15710 LI89_15710 3404229 3406292 - methionine tRNA cytidine acetyltransferase cetylates the wobble base C34 of the elongation-specific methionine tRNA gene gene3027 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15710 LI89_15715 LI89_15715 LI89_15715 3406294 3406746 - membrane protein gene gene3028 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15715 LI89_15720 LI89_15720 LI89_15720 3406862 3407731 - hypothetical protein gene gene3029 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15720 LI89_15725 LI89_15725 LI89_15725 3407905 3408618 - phosphoribosylaminoimidazole-succinocarboxamide synthase catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis%3B SAICAR synthase gene gene3030 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15725 LI89_15730 LI89_15730 LI89_15730 3408743 3409801 - outer membrane protein assembly factor BamC gene gene3031 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15730 LI89_15735 LI89_15735 LI89_15735 3409818 3410699 - dihydrodipicolinate synthase gene gene3032 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15735 LI89_15740 LI89_15740 gcvR gcvR 3410864 3411433 + glycine cleavage system transcriptional repressor negative transcriptional regulator of the gcvTHP operon gene gene3033 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15740 LI89_15745 LI89_15745 bcp bcp 3411436 3411906 + thiol peroxidase bacterioferritin comigratory protein%3B thiol peroxidase%3B thioredoxin-dependent%3B hydroperoxide peroxidase%3B in Escherichia coli this enzyme preferentially reduces linoleic acid hydroperoxide%3B contains an active site cysteine gene gene3034 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15745 LI89_15750 LI89_15750 LI89_15750 3412116 3413180 - permase gene gene3035 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15750 LI89_15755 LI89_15755 LI89_15755 3413533 3415041 + TPR repeat-containing protein gene gene3036 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15755 LI89_15760 LI89_15760 LI89_15760 3415053 3415406 + arsenate reductase gene gene3037 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15760 LI89_15765 LI89_15765 LI89_15765 3415454 3416161 - DNA replication initiation factor controls initiation of DNA replication by inhibiting re-initiation of replication%2C promotes hydrolysis of DnaA-bound ATP gene gene3038 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15765 LI89_15770 LI89_15770 LI89_15770 3416414 3417703 - uracil transporter gene gene3039 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15770 LI89_15775 LI89_15775 upp upp 3417796 3418422 - uracil phosphoribosyltransferase Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate gene gene3040 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15775 LI89_15780 LI89_15780 LI89_15780 3418658 3419701 + phosphoribosylaminoimidazole synthetase catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis gene gene3041 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15780 LI89_15785 LI89_15785 purN purN 3419742 3420380 + phosphoribosylglycinamide formyltransferase glycinamide ribonucleotide transformylase%3B GAR Tfase%3B catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate%3B PurN requires formyl folate for the reaction unlike PurT which uses formate gene gene3042 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15785 LI89_15790 LI89_15790 LI89_15790 3420516 3421061 + spermidine acetyltransferase catalyzes the formation of N(1)- and N(8)-acetylspermidine from spermidine gene gene3043 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15790 LI89_15795 LI89_15795 LI89_15795 3421090 3422295 - flagellar protein FliB gene gene3044 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15795 LI89_15800 LI89_15800 LI89_15800 3422374 3423573 - hypothetical protein gene gene3045 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15800 LI89_15805 LI89_15805 pstB pstB 3423692 3424504 - phosphate ABC transporter ATP-binding protein ATP-binding protein%3B PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation gene gene3046 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15805 LI89_15810 LI89_15810 LI89_15810 3424533 3426197 - phosphate ABC transporter permease gene gene3047 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15810 LI89_15815 LI89_15815 LI89_15815 3426197 3428383 - phosphate ABC transporter permease gene gene3048 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15815 LI89_15820 LI89_15820 LI89_15820 3428629 3430698 + polyphosphate kinase gene gene3049 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15820 LI89_15825 LI89_15825 LI89_15825 3430703 3432271 + exopolyphosphatase gene gene3050 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15825 LI89_15830 LI89_15830 LI89_15830 3432529 3432720 + hypothetical protein gene gene3051 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15830 LI89_15835 LI89_15835 LI89_15835 3432768 3434243 + dihydroorotate dehydrogenase gene gene3052 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15835 LI89_15840 LI89_15840 LI89_15840 3434416 3437766 + diguanylate cyclase gene gene3053 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15840 LI89_15845 LI89_15845 LI89_15845 3437860 3439212 + chaperone gene gene3054 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15845 LI89_15850 LI89_15850 LI89_15850 3440153 3441487 + multidrug transporter gene gene3055 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15850 LI89_15855 LI89_15855 LI89_15855 3441487 3444642 + multidrug transporter Part of a tripartite efflux system composed of MdtA%2C MdtB and MdtC which confers resistance against novobiocin and deoxycholate gene gene3056 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15855 LI89_15860 LI89_15860 LI89_15860 3444639 3447713 + multidrug transporter Part of a tripartite efflux system composed of MdtA%2C MdtB and MdtC which confers resistance against novobiocin and deoxycholate gene gene3057 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15860 LI89_15870 LI89_15870 LI89_15870 3447895 3449304 + transporter gene gene3058 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15870 LI89_15875 LI89_15875 LI89_15875 3449321 3450697 + histidine kinase gene gene3059 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15875 LI89_15880 LI89_15880 LI89_15880 3450706 3451425 + transcriptional regulator response regulator in two-component regulatory system with BaeS%3B regulator of RNA synthesis%2C flagellar biosynthesis%2C chemotaxis and transport gene gene3060 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15880 LI89_15885 LI89_15885 LI89_15885 3451504 3451842 + hypothetical protein gene gene3061 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15885 LI89_15890 LI89_15890 LI89_15890 3451921 3452259 - XRE family transcriptional regulator gene gene3062 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15890 LI89_15895 LI89_15895 LI89_15895 3452256 3453593 - toxin HipA gene gene3063 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15895 LI89_15900 LI89_15900 LI89_15900 3453897 3455318 + protease gene gene3064 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15900 LI89_15905 LI89_15905 LI89_15905 3455790 3456689 + lipid kinase cytosolic protein with phosphatidylglycerol kinase activity%3B undetermined physiological role gene gene3065 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15905 LI89_15910 LI89_15910 srlA srlA 3457068 3457616 + PTS system glucitol/sorbitol-specific transporter subunit IIC catalyzes the phosphorylation of incoming sugar substrates along with their translocation across the cell membrane%3B the IIC domain forms the PTS system translocation channel and contains the specific substrate-binding site gene gene3066 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15910 LI89_15915 LI89_15915 srlE srlE 3457652 3458674 + PTS system glucitol/sorbitol-specific transporter subunit IIB catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B subunit IIB transfers the phosphoryl group to the substrate gene gene3067 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15915 LI89_15920 LI89_15920 LI89_15920 3458740 3459102 + PTS system glucitol/sorbitol-specific transporter subunit IIA phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel gene gene3068 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15920 LI89_15925 LI89_15925 LI89_15925 3459122 3459901 + sorbitol-6-phosphate 2-dehydrogenase catalyzes the conversion of sorbitol 6-phosphate into fructose 6-phosphate gene gene3069 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15925 LI89_15930 LI89_15930 LI89_15930 3460007 3460372 + XRE family transcriptional regulator gene gene3070 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15930 LI89_15935 LI89_15935 srlR srlR 3460457 3461227 + transcriptional regulator regulates genes involved in glucitol utilization gene gene3071 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15935 LI89_15940 LI89_15940 LI89_15940 3461220 3462185 + arabinose 5-phosphate isomerase gene gene3072 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15940 LI89_15945 LI89_15945 LI89_15945 3462266 3462796 - hypothetical protein gene gene3073 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15945 LI89_15950 LI89_15950 LI89_15950 3463064 3463927 + hypothetical protein gene gene3074 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15950 LI89_15955 LI89_15955 LI89_15955 3463989 3464789 - hydroxymethylpyrimidine kinase catalyzes the formation hydroxymethylpyrimidine phosphate from hydroxymethylpyrimidine and the formation of of 4-amino-2-methyl-5-diphosphomethylpyrimidine from hydroxymethylpyrimidine phosphate gene gene3075 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15955 LI89_15960 LI89_15960 LI89_15960 3464974 3465414 + GCN5 family acetyltransferase gene gene3076 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15960 LI89_15965 LI89_15965 LI89_15965 3465544 3466260 + hypothetical protein gene gene3077 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15965 LI89_15970 LI89_15970 LI89_15970 3466306 3467574 - gluconate 2-dehydrogenase gene gene3078 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15970 LI89_15975 LI89_15975 LI89_15975 3467576 3469195 - choline dehydrogenase gene gene3079 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15975 LI89_15980 LI89_15980 LI89_15980 3469213 3469722 - 2-keto-D-gluconate dehydrogenase gene gene3080 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15980 LI89_15985 LI89_15985 LI89_15985 3470019 3471887 - hypothetical protein gene gene3081 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15985 LI89_15990 LI89_15990 guaA guaA 3472138 3473715 - GMP synthase contains glutamine-hydrolyzing domain and glutamine amidotransferase%3B GMP-binding domain%3B functions to produce GMP from XMP in the IMP pathway gene gene3082 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15990 LI89_15995 LI89_15995 LI89_15995 3473791 3475254 - inosine-5-monophosphate dehydrogenase gene gene3083 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_15995 LI89_16000 LI89_16000 xseA xseA 3475423 3476799 + exodeoxyribonuclease VII large subunit bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides gene gene3084 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16000 LI89_16005 LI89_16005 LI89_16005 3476843 3477067 - primosomal protein N' (replication factor Y) - superfamily II helicase gene gene3085 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16005 LI89_16010 LI89_16010 LI89_16010 3477096 3478052 - transporter gene gene3086 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16010 LI89_16015 LI89_16015 LI89_16015 3478176 3479660 - GTP-binding protein Der gene gene3087 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16015 LI89_16020 LI89_16020 LI89_16020 3479663 3479863 + hypothetical protein gene gene3088 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16020 LI89_16025 LI89_16025 LI89_16025 3479860 3481041 - membrane biogenesis protein gene gene3089 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16025 LI89_16030 LI89_16030 LI89_16030 3481053 3481673 - membrane protein gene gene3090 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16030 LI89_16035 LI89_16035 hisS hisS 3481687 3482961 - histidine--tRNA ligase catalyzes a two-step reaction%2C first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B class II aminoacyl-tRNA synthetase%3B forms homodimers%3B some organisms have a paralogous gene%2C hisZ%2C that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG gene gene3091 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16035 LI89_16040 LI89_16040 LI89_16040 3483177 3484301 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gene gene3092 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16040 LI89_16045 LI89_16045 LI89_16045 3484422 3485438 - cytoskeletal protein RodZ gene gene3093 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16045 LI89_16050 LI89_16050 LI89_16050 3485428 3486177 - pilus assembly protein PilW gene gene3094 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16050 LI89_16055 LI89_16055 LI89_16055 3486372 3487568 - ribosomal RNA large subunit methyltransferase N 23S rRNA m2A2503 methyltransferase%3B methylates the C2 position of the A2530 nucleotide in 23S rRNA%3B may be involved in antibiotic resistance gene gene3095 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16055 LI89_16065 LI89_16065 LI89_16065 3487796 3488221 - nucleoside diphosphate kinase catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate gene gene3096 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16065 LI89_16070 LI89_16070 LI89_16070 3488500 3490911 - exotoxin gene gene3097 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16070 LI89_16075 LI89_16075 LI89_16075 3491067 3493403 - penicillin-binding protein 1C penicillin-insensitive transglycosylase/transpeptidase gene gene3098 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16075 LI89_16080 LI89_16080 LI89_16080 3493456 3498492 - hypothetical protein gene gene3099 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16080 LI89_16085 LI89_16085 LI89_16085 3498946 3502410 + hypothetical protein gene gene3100 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16085 LI89_16090 LI89_16090 LI89_16090 3502856 3506389 + hypothetical protein gene gene3101 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16090 LI89_16095 LI89_16095 LI89_16095 3506486 3507382 - endopeptidase IV gene gene3102 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16095 LI89_16100 LI89_16100 LI89_16100 3507544 3508827 - aminopeptidase B catalyzes the removal of an N-terminal amino acid from a peptide or arylamide gene gene3103 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16100 LI89_16105 LI89_16105 LI89_16105 3509010 3509210 - hypothetical protein gene gene3104 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16105 LI89_16110 LI89_16110 LI89_16110 3509355 3509690 - 2Fe-2S ferredoxin gene gene3105 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16110 LI89_16115 LI89_16115 hscA hscA 3509693 3511543 - chaperone protein HscA involved in the maturation of iron-sulfur cluster-containing proteins gene gene3106 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16115 LI89_16120 LI89_16120 hscB hscB 3511691 3512215 - co-chaperone HscB J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone%3B may function in biogenesis of iron-sulfur proteins gene gene3107 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16120 LI89_16125 LI89_16125 iscA iscA 3512323 3512646 - iron-sulfur cluster assembly protein forms iron-sulfur clusters of ferredoxin [2FE-2S]%3B binds iron in the presence of the thioredoxin reductase system%3B forms homodimers and tetramers%3B similar to SufA protein gene gene3108 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16125 LI89_16130 LI89_16130 LI89_16130 3512749 3513135 - scaffolding protein gene gene3109 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16130 LI89_16135 LI89_16135 LI89_16135 3513166 3514380 - cysteine desulfurase catalyzes the removal of elemental sulfur from cysteine to produce alanine%3B involved in NAD biosynthesis gene gene3110 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16135 LI89_16140 LI89_16140 LI89_16140 3514449 3514943 - transcriptional regulator gene gene3111 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16140 LI89_16145 LI89_16145 LI89_16145 3515100 3515873 - tRNA (cytidine/uridine-2'-O-)-methyltransferase catalyzes the fromation of 2'O-methylated cytidine or 2'O-methylated uridine at position 32 in tRNA gene gene3112 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16145 LI89_16150 LI89_16150 LI89_16150 3515992 3516798 + inositol monophosphatase gene gene3113 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16150 LI89_16155 LI89_16155 LI89_16155 3516869 3517885 - nickel transporter gene gene3114 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16155 LI89_16160 LI89_16160 LI89_16160 3517876 3518550 - membrane protein gene gene3115 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16160 LI89_16165 LI89_16165 LI89_16165 3518694 3519977 + stationary phase inducible protein CsiE gene gene3116 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16165 LI89_16170 LI89_16170 LI89_16170 3519974 3521131 - 3-phenylpropionic acid transporter transporter of 3-phenylpropionate across the inner membrane%3B member of the major facilitator superfamily of transporters gene gene3117 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16170 LI89_16175 LI89_16175 LI89_16175 3521298 3522551 - serine hydroxymethyltransferase gene gene3118 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16175 LI89_16180 LI89_16180 LI89_16180 3522938 3524128 + dihydropteridine reductase flavohemoprotein%3B catalyzes the formation of nitrate from nitric oxide%3B can also catalyze the reduction of dihydropteridine gene gene3119 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16180 LI89_16185 LI89_16185 LI89_16185 3524392 3525291 + hypothetical protein gene gene3120 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16185 LI89_16190 LI89_16190 LI89_16190 3525339 3525719 + hypothetical protein gene gene3121 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16190 LI89_16195 LI89_16195 LI89_16195 3525838 3527007 + hypothetical protein gene gene3122 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16195 LI89_16200 LI89_16200 LI89_16200 3527099 3527986 + hydrolase phosphotriesterase homology protein%3B PhP%3B YhfV%3B member of a family of proteins related to phosphotriesterase (PTE) gene gene3123 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16200 LI89_16205 LI89_16205 LI89_16205 3527989 3528342 + membrane protein gene gene3124 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16205 LI89_16210 LI89_16210 LI89_16210 3528353 3529648 + membrane protein gene gene3125 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16210 LI89_16215 LI89_16215 LI89_16215 3529848 3530186 - nitrogen regulatory protein P-II 1 indirectly regulates nitrogen metabolism%3B at high nitrogen levels P-II prevents the phosphorylation of NR-I%2C the transcriptional activator of the glutamine synthetase gene (glnA)%3B at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA gene gene3126 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16215 LI89_16220 LI89_16220 LI89_16220 3530201 3531823 - NAD synthetase NH(3)-dependent%3B catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP%3B ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one%3B forms homodimers gene gene3127 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16220 LI89_16225 LI89_16225 LI89_16225 3532010 3533347 - response regulator GlrR with GlrK is part of a two-component signal transduction system regulating glmY gene gene3128 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16225 LI89_16230 LI89_16230 LI89_16230 3533310 3534407 - membrane protein gene gene3129 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16230 LI89_16235 LI89_16235 LI89_16235 3534411 3535847 - histidine kinase part of the GlrKR two-component signal transduction system involved in the regulation of glmY gene gene3130 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16235 LI89_16240 LI89_16240 LI89_16240 3536901 3537347 + hypothetical protein gene gene3131 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16240 LI89_16245 LI89_16245 LI89_16245 3537606 3541496 - phosphoribosylformylglycinamidine synthase catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis gene gene3132 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16245 LI89_16250 LI89_16250 LI89_16250 3541811 3543271 + murein transglycosylase gene gene3133 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16250 LI89_16255 LI89_16255 LI89_16255 3543466 3544047 - tRNA adenosine deaminase gene gene3134 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16255 LI89_16260 LI89_16260 LI89_16260 3544181 3545230 + membrane protein gene gene3135 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16260 LI89_16265 LI89_16265 LI89_16265 3545277 3545960 - hypothetical protein gene gene3136 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16265 LI89_16270 LI89_16270 murQ murQ 3546069 3546956 - N-acetylmuramic acid-6-phosphate etherase catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate%3B involved in MurNAc dissimilation pathway gene gene3137 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16270 LI89_16275 LI89_16275 LI89_16275 3547158 3548000 + transcriptional regulator gene gene3138 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16275 LI89_16280 LI89_16280 LI89_16280 3548062 3548322 + ferredoxin gene gene3139 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16280 LI89_16285 LI89_16285 LI89_16285 3548388 3549731 - gluconate permease gene gene3140 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16285 LI89_16290 LI89_16290 acpS acpS 3550160 3550540 - 4'-phosphopantetheinyl transferase Catalyzes the formation of holo-ACP%2C which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids gene gene3141 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16290 LI89_16295 LI89_16295 LI89_16295 3550540 3551271 - pyridoxine 5'-phosphate synthase involved in the de novo synthesis of pyridoxine (Vitamin B6) gene gene3142 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16295 LI89_16300 LI89_16300 recO recO 3551440 3552165 - DNA repair protein RecO involved in DNA repair and RecFOR pathway recombination%3B RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA gene gene3143 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16300 LI89_16305 LI89_16305 LI89_16305 3552175 3553086 - hypothetical protein gene gene3144 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16305 LI89_16310 LI89_16310 rnc rnc 3553083 3553763 - ribonuclease III cytoplasmic enzyme involved in processing rRNA and some mRNAs%3B substrates typically have dsRNA regions%3B forms a homodimer%3B have N-terminal nuclease and C-terminal RNA-binding domains%3B requires magnesium as preferred ion for activity gene gene3145 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16310 LI89_16315 LI89_16315 LI89_16315 3554009 3555007 - signal peptidase I catalyzes the cleavage of the amino-terminal leader peptide from secretory proteins gene gene3146 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16315 LI89_16320 LI89_16320 LI89_16320 3555017 3556816 - elongation factor 4 gene gene3147 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16320 LI89_16325 LI89_16325 LI89_16325 3557188 3558024 + membrane protein gene gene3148 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16325 LI89_16330 LI89_16330 LI89_16330 3558039 3558500 - SoxR reducing system protein RseC gene gene3149 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16330 LI89_16335 LI89_16335 rseB rseB 3558497 3559453 - anti-sigma E factor periplasmic protein%3B interacts with the C-terminal domain of RseA and stimulates RseA binding to sigmaE via the cytoplasmic RseA N-terminal domain which then sequesters sigmaE in the membrane thereby preventing sigmaE associated with core RNAP gene gene3150 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16335 LI89_16340 LI89_16340 LI89_16340 3559453 3560109 - anti-RNA polymerase sigma factor SigE gene gene3151 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16340 LI89_16345 LI89_16345 LI89_16345 3560134 3560709 - RNA polymerase sigma factor RpoE Member of the extracytoplasmic function sigma factors which are active under specific conditions%3B binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription%3B this sigma factor is involved in heat shock and oxidative stress response gene gene3152 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16345 LI89_16355 LI89_16355 LI89_16355 3560898 3562535 + L-aspartate oxidase catalyzes the formation of oxaloacetate from L-aspartate gene gene3153 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16355 LI89_16360 LI89_16360 LI89_16360 3562647 3563393 - tRNA (adenine-N6)-methyltransferase gene gene3154 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16360 LI89_16365 LI89_16365 LI89_16365 3563526 3564851 + ATP-dependent RNA helicase SrmB facilitates an early step in the assembly of the 50S subunit of the ribosome gene gene3155 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16365 LI89_16370 LI89_16370 LI89_16370 3564989 3565645 - phospholipase A gene gene3156 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16370 LI89_16375 LI89_16375 LI89_16375 3565734 3566708 - phospholipase A gene gene3157 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16375 LI89_16380 LI89_16380 LI89_16380 3566929 3567312 - autonomous glycyl radical cofactor GrcA stress-induced glycyl radical protein that can replace an oxidatively damaged pyruvate formate-lyase subunit gene gene3158 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16380 LI89_16385 LI89_16385 LI89_16385 3567665 3568351 + uracil-DNA glycosylase Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine gene gene3159 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16385 LI89_16390 LI89_16390 LI89_16390 3568420 3568998 - heat shock protein GrpE with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins%3B may act as a thermosensor gene gene3160 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16390 LI89_16395 LI89_16395 ppnK ppnK 3569122 3570003 + inorganic polyphosphate kinase catalyzes the phosphorylation of NAD to NADP gene gene3161 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16395 LI89_16400 LI89_16400 LI89_16400 3570090 3571751 + recombination and repair protein gene gene3162 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16400 LI89_16405 LI89_16405 LI89_16405 3571865 3572206 + membrane biogenesis protein gene gene3163 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16405 LI89_16410 LI89_16410 LI89_16410 3572359 3572643 - hypothetical protein gene gene3164 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16410 LI89_16415 LI89_16415 LI89_16415 3572636 3573070 - cyclase gene gene3165 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16415 LI89_16420 LI89_16420 smpB smpB 3573231 3573713 + SsrA-binding protein binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes%3B also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site%3B SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus%3B both the tmRNA and SmpB are regulated in cell cycle-dependent manner%3B functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation gene gene3166 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16420 LI89_16425 LI89_16425 LI89_16425 3574336 3575526 + integrase gene gene3167 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16425 LI89_16430 LI89_16430 LI89_16430 3576030 3576293 + pilus assembly protein HicB gene gene3168 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16430 LI89_16435 LI89_16435 LI89_16435 3576290 3576622 + DNA repair protein gene gene3169 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16435 LI89_16440 LI89_16440 LI89_16440 3576663 3577352 - hypothetical protein gene gene3170 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16440 LI89_16445 LI89_16445 LI89_16445 3577609 3578814 - hypothetical protein gene gene3171 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16445 LI89_16450 LI89_16450 LI89_16450 3579006 3579722 - integrase gene gene3172 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16450 LI89_16460 LI89_16460 LI89_16460 3581089 3581967 + DNA-binding protein gene gene3173 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16460 LI89_16465 LI89_16465 LI89_16465 3581970 3582170 + transcriptional regulator gene gene3174 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16465 LI89_16470 LI89_16470 LI89_16470 3582521 3582709 + hypothetical protein gene gene3175 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16470 LI89_16475 LI89_16475 LI89_16475 3582702 3583661 + DNA primase gene gene3176 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16475 LI89_16480 LI89_16480 LI89_16480 3583658 3584746 + transcriptional regulator gene gene3177 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16480 LI89_16485 LI89_16485 LI89_16485 3584929 3585051 + hypothetical protein gene gene3178 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16485 LI89_16490 LI89_16490 LI89_16490 3585345 3585590 + hypothetical protein gene gene3179 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16490 LI89_16495 LI89_16495 LI89_16495 3586085 3587245 - integrase gene gene3180 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16495 LI89_16500 LI89_16500 LI89_16500 3587350 3588300 - AraC family transcriptional regulator gene gene3181 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16500 LI89_16505 LI89_16505 LI89_16505 3588327 3589103 - hypothetical protein gene gene3182 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16505 LI89_16510 LI89_16510 LI89_16510 3589400 3589855 + hypothetical protein gene gene3183 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16510 LI89_16515 LI89_16515 LI89_16515 3589873 3590121 - hypothetical protein gene gene3184 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16515 LI89_16520 LI89_16520 LI89_16520 3590302 3590862 - TetR family transcriptional regulator gene gene3185 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16520 LI89_16525 LI89_16525 LI89_16525 3591000 3592091 + N-ethylmaleimide reductase gene gene3186 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16525 LI89_16530 LI89_16530 LI89_16530 3592166 3592948 + AraC family transcriptional regulator gene gene3187 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16530 LI89_16535 LI89_16535 LI89_16535 3593082 3593900 + short-chain dehydrogenase gene gene3188 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16535 LI89_16540 LI89_16540 LI89_16540 3593903 3594313 + hypothetical protein gene gene3189 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16540 LI89_16545 LI89_16545 LI89_16545 3594310 3595332 + NADPH:quinone oxidoreductase gene gene3190 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16545 LI89_16550 LI89_16550 LI89_16550 3595472 3596710 - transposase gene gene3191 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16550 LI89_16560 LI89_16560 LI89_16560 3597870 3598373 - hypothetical protein gene gene3192 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16560 LI89_16565 LI89_16565 LI89_16565 3598680 3600083 + hypothetical protein gene gene3193 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16565 LI89_16570 LI89_16570 LI89_16570 3600317 3601477 + integrase gene gene3194 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16570 LI89_16580 LI89_16580 LI89_16580 3601979 3602536 - hypothetical protein gene gene3195 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16580 LI89_16585 LI89_16585 LI89_16585 3603220 3603768 + acetyltransferase gene gene3196 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16585 LI89_16590 LI89_16590 LI89_16590 3603959 3604981 - AraC family transcriptional regulator gene gene3197 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16590 LI89_16595 LI89_16595 LI89_16595 3605044 3606246 + transporter gene gene3198 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16595 LI89_16600 LI89_16600 LI89_16600 3606604 3607485 - hypothetical protein gene gene3199 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16600 LI89_16605 LI89_16605 LI89_16605 3607687 3607953 - hypothetical protein gene gene3200 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16605 LI89_16615 LI89_16615 LI89_16615 3608539 3608868 - hypothetical protein gene gene3201 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16615 LI89_16620 LI89_16620 LI89_16620 3608883 3609260 - hypothetical protein gene gene3202 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16620 LI89_16625 LI89_16625 LI89_16625 3610257 3611762 + transporter gene gene3203 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16625 LI89_16630 LI89_16630 LI89_16630 3611824 3612585 - hypothetical protein gene gene3204 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16630 LI89_16635 LI89_16635 LI89_16635 3612634 3613464 - transcriptional regulator represses the celABCDF-ydjC operon involved in carbon uptake gene gene3205 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16635 LI89_16640 LI89_16640 LI89_16640 3613516 3613863 - PTS system N%2CN'-diacetylchitobiose-specific transporter subunit IIA catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B involved N%2CN'-diacetylchitobiose transport%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake gene gene3206 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16640 LI89_16645 LI89_16645 LI89_16645 3613892 3615277 - 6-phospho-beta-glucosidase gene gene3207 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16645 LI89_16650 LI89_16650 LI89_16650 3615316 3616677 - PTS system N%2CN'-diacetylchitobiose-specific transporter subunit IIC catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B involved in N%2CN'-diacetylchitobiose transport%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake gene gene3208 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16650 LI89_16655 LI89_16655 LI89_16655 3616688 3617005 - PTS system N%2CN'-diacetylchitobiose-specific transporter subunit IIB catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B involved in N%2CN'-diacetylchitobiose transport%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake gene gene3209 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16655 LI89_16660 LI89_16660 LI89_16660 3617583 3618746 + oxidoreductase gene gene3210 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16660 LI89_16665 LI89_16665 LI89_16665 3619030 3619410 + chromosome condensation protein CrcB gene gene3211 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16665 LI89_16670 LI89_16670 ccrB ccrB 3619497 3619901 + camphor resistance protein CrcB may be involved in chromosome condensation%3B overexpression in Escherichia coli protects against decondensation by camphor%3B overexpressing the protein results in an increase in supercoiling gene gene3212 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16670 LI89_16675 LI89_16675 LI89_16675 3620082 3621257 - voltage-gated potassium channel TrkA gene gene3213 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16675 LI89_16680 LI89_16680 LI89_16680 3621601 3621933 + acid-resistance protein gene gene3214 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16680 LI89_16685 LI89_16685 LI89_16685 3621999 3623057 - nickel transporter gene gene3215 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16685 LI89_16690 LI89_16690 LI89_16690 3623081 3624070 - urea transporter gene gene3216 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16690 LI89_16695 LI89_16695 LI89_16695 3624186 3625169 - urease accessory protein UreD gene gene3217 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16695 LI89_16700 LI89_16700 LI89_16700 3625166 3625831 - urease accessory protein UreG gene gene3218 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16700 LI89_16705 LI89_16705 LI89_16705 3625950 3626636 - urease accessory protein UreF gene gene3219 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16705 LI89_16710 LI89_16710 ureE ureE 3626658 3627344 - urease accessory protein UreE involved in the assembly of the urease metallocenter%3B possible nickel donor gene gene3220 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16710 LI89_16715 LI89_16715 ureC ureC 3627581 3629299 - urease subunit alpha ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide%3B in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa%3B the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits gene gene3221 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16715 LI89_16720 LI89_16720 ureB ureB 3629502 3629936 - urease subunit beta ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide%3B in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa%3B the holoenzyme is composed of 3 UreC (alpha) and 3 UreAB (gamma/beta) gene gene3222 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16720 LI89_16725 LI89_16725 LI89_16725 3629991 3630293 - urease subunit gamma gene gene3223 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16725 LI89_16735 LI89_16735 LI89_16735 3630618 3630812 - hypothetical protein gene gene3224 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16735 LI89_16740 LI89_16740 LI89_16740 3631439 3632104 - nickel ABC transporter ATP-binding protein gene gene3225 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16740 LI89_16745 LI89_16745 LI89_16745 3632097 3632903 - peptide ABC transporter ATP-binding protein gene gene3226 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16745 LI89_16750 LI89_16750 LI89_16750 3632903 3633709 - peptide ABC transporter permease gene gene3227 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16750 LI89_16755 LI89_16755 LI89_16755 3633706 3634674 - peptide ABC transporter permease gene gene3228 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16755 LI89_16760 LI89_16760 LI89_16760 3634674 3636257 - nickel ABC transporter substrate-binding protein gene gene3229 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16760 LI89_16765 LI89_16765 LI89_16765 3636861 3637670 - DNA gyrase gene gene3230 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16765 LI89_16770 LI89_16770 LI89_16770 3637788 3638093 - DNA-directed RNA polymerase subunit beta gene gene3231 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16770 LI89_16775 LI89_16775 LI89_16775 3638203 3638640 - rhodanese gene gene3232 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16775 LI89_16780 LI89_16780 ftrA ftrA 3638737 3639720 + transcriptional regulator upregulated by FixLJ/FixK under oxygen limitation%3B involved in regulation of genes involved in carbon and amino acid metabolism gene gene3233 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16780 LI89_16785 LI89_16785 LI89_16785 3639809 3640021 - cold-shock protein gene gene3234 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16785 LI89_16790 LI89_16790 LI89_16790 3640403 3640741 + MbeD/MobD like protein gene gene3235 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16790 LI89_16795 LI89_16795 LI89_16795 3640832 3641281 + membrane protein gene gene3236 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16795 LI89_16800 LI89_16800 LI89_16800 3641332 3641667 - hypothetical protein gene gene3237 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16800 LI89_16810 LI89_16810 LI89_16810 3643088 3644095 - AraC family transcriptional regulator gene gene3238 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16810 LI89_16815 LI89_16815 LI89_16815 3644187 3645290 + hypothetical protein gene gene3239 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16815 LI89_16825 LI89_16825 LI89_16825 3645486 3645860 - acid-shock protein gene gene3240 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16825 LI89_16830 LI89_16830 LI89_16830 3646084 3646392 + membrane protein gene gene3241 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16830 LI89_16835 LI89_16835 LI89_16835 3646530 3647993 - DNA-binding protein gene gene3242 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16835 LI89_16840 LI89_16840 LI89_16840 3648090 3648521 + alkylhydroperoxidase gene gene3243 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16840 LI89_16845 LI89_16845 LI89_16845 3648802 3649038 + glutaredoxin gene gene3244 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16845 LI89_16850 LI89_16850 nrdI nrdI 3649052 3649456 + ribonucleotide reductase stimulatory protein in Salmonella NrdI has a stimulatory effect on the ribonucleotide reductase activity of NrdH with NrdEF gene gene3245 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16850 LI89_16855 LI89_16855 LI89_16855 3649438 3651588 + ribonucleotide-diphosphate reductase subunit alpha Catalyzes the rate-limiting step in dNTP synthesis gene gene3246 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16855 LI89_16860 LI89_16860 LI89_16860 3651621 3652592 + ribonucleotide-diphosphate reductase subunit beta B2 or R2 protein%3B type 1b enzyme%3B catalyzes the rate-limiting step in dNTP synthesis%3B converts nucleotides to deoxynucleotides%3B forms a homodimer and then a multimeric complex with NrdE gene gene3247 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16860 LI89_16865 LI89_16865 LI89_16865 3653088 3654287 + glycine/betaine ABC transporter ATP-binding protein with ProWX is involved in the high-affinity uptake of glycine betaine gene gene3248 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16865 LI89_16870 LI89_16870 LI89_16870 3654280 3655461 + glycine/betaine ABC transporter permease with ProVX is involved in the high-affinity uptake of glycine betaine gene gene3249 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16870 LI89_16875 LI89_16875 proX proX 3655623 3656627 + glycine/betaine ABC transporter substrate-binding protein with ProVW%2C part of the high-affinity transport system for the osmoprotectant glycine betaine gene gene3250 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16875 LI89_16880 LI89_16880 LI89_16880 3656880 3656956 - tRNA-Asp tRNA gene3251 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16880 LI89_16885 LI89_16885 LI89_16885 3657069 3657833 - DNA polymerase III subunit epsilon 3'-5' exonuclease of DNA polymerase III gene gene3252 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16885 LI89_16890 LI89_16890 LI89_16890 3657904 3658368 + ribonuclease H gene gene3253 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16890 LI89_16895 LI89_16895 LI89_16895 3658396 3659115 - hypothetical protein gene gene3254 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16895 LI89_16900 LI89_16900 LI89_16900 3659162 3659917 + hydroxyacylglutathione hydrolase gene gene3255 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16900 LI89_16905 LI89_16905 mltD mltD 3660139 3661380 + lytic murein transglycosylase catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues%3B may play a role in recycling muropeptides during cell division and/or cell elongation%3B in Helicobacter pylori MltD is a endolytic transglycosylase involved mainly in the rearrangement of the peptidoglycan layer of the bacterial cell wall gene gene3256 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16905 LI89_16910 LI89_16910 LI89_16910 3661432 3662193 - hypothetical protein gene gene3257 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16910 LI89_16915 LI89_16915 LI89_16915 3662457 3663638 - MFS sugar transporter gene gene3258 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16915 LI89_16920 LI89_16920 LI89_16920 3663757 3664659 + LysR family transcriptional regulator gene gene3259 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16920 LI89_16925 LI89_16925 dkgB dkgB 3664704 3665507 - 2%2C5-diketo-D-gluconic acid reductase catalyzes the reduction of 2%2C5-diketo-D-gluconic acid to 2-keto-L-gulonic acid gene gene3260 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16925 LI89_16930 LI89_16930 LI89_16930 3665728 3666975 - 3-oxoacyl-ACP synthase FabB%3B beta-ketoacyl-ACP synthase I%2C KASI%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP gene gene3261 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16930 LI89_16935 LI89_16935 fabG fabG 3666972 3667703 - 3-ketoacyl-ACP reductase Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis gene gene3262 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16935 LI89_16940 LI89_16940 LI89_16940 3667700 3668164 - 3-hydroxy-fatty acyl-ACP dehydratase gene gene3263 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16940 LI89_16945 LI89_16945 LI89_16945 3668161 3669336 - 3-oxoacyl-ACP synthase FabB%3B beta-ketoacyl-ACP synthase I%2C KASI%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP gene gene3264 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16945 LI89_16950 LI89_16950 LI89_16950 3669342 3669914 - hypothetical protein gene gene3265 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16950 LI89_16955 LI89_16955 LI89_16955 3669887 3672244 - membrane protein gene gene3266 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16955 LI89_16960 LI89_16960 LI89_16960 3672216 3672821 - membrane protein gene gene3267 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16960 LI89_16965 LI89_16965 LI89_16965 3672818 3673246 - 4-hydroxybenzoyl-CoA thioesterase gene gene3268 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16965 LI89_16970 LI89_16970 LI89_16970 3673248 3675014 - acyltransferase gene gene3269 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16970 LI89_16975 LI89_16975 LI89_16975 3675005 3675352 - hydroxymyristoyl-ACP dehydratase gene gene3270 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16975 LI89_16980 LI89_16980 LI89_16980 3675349 3676740 - AMP-binding protein gene gene3271 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16980 LI89_16985 LI89_16985 LI89_16985 3676707 3677300 - DNA gyrase subunit B gene gene3272 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16985 LI89_16990 LI89_16990 LI89_16990 3677314 3677565 - acyl carrier protein carries the fatty acid chain in fatty acid biosynthesis gene gene3273 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16990 LI89_16995 LI89_16995 LI89_16995 3677581 3677838 - acyl carrier protein gene gene3274 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_16995 LI89_17000 LI89_17000 LI89_17000 3677838 3678653 - acyl-phosphate glycerol 3-phosphate acyltransferase gene gene3275 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17000 LI89_17005 LI89_17005 LI89_17005 3678653 3679369 - beta-ketoacyl synthase gene gene3276 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17005 LI89_17010 LI89_17010 LI89_17010 3679758 3680144 + hypothetical protein gene gene3277 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17010 LI89_17015 LI89_17015 LI89_17015 3680239 3681312 + methyltransferase gene gene3278 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17015 LI89_17020 LI89_17020 LI89_17020 3681594 3681670 - tRNA-Asp tRNA gene3279 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17020 LI89_17025 LI89_17025 LI89_17025 3681796 3681911 - 5S ribosomal RNA rRNA gene3280 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17025 LI89_17030 LI89_17030 LI89_17030 3682005 3684938 - 23S ribosomal RNA rRNA gene3281 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17030 LI89_17035 LI89_17035 LI89_17035 3685173 3685248 - tRNA-Glu tRNA gene3282 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17035 LI89_17040 LI89_17040 LI89_17040 3685381 3686929 - 16S ribosomal RNA rRNA gene3283 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17040 LI89_17045 LI89_17045 LI89_17045 3687360 3687926 - D%2CD-heptose 1%2C7-bisphosphate phosphatase Converts the D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate gene gene3284 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17045 LI89_17050 LI89_17050 metN metN 3688113 3689144 + DL-methionine transporter ATP-binding subunit part of the metNIQ transport system for methionine gene gene3285 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17050 LI89_17055 LI89_17055 LI89_17055 3689137 3689790 + DL-methionine transporter permease subunit part of the MetNIQ methionine uptake system gene gene3286 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17055 LI89_17060 LI89_17060 metQ metQ 3689866 3690681 + DL-methionine transporter substrate-binding subunit gene gene3287 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17060 LI89_17065 LI89_17065 rcsF rcsF 3690829 3691236 + membrane protein gene gene3288 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17065 LI89_17070 LI89_17070 LI89_17070 3691233 3691940 + tRNA (adenine(37)-N6)-methyltransferase gene gene3289 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17070 LI89_17080 LI89_17080 LI89_17080 3692048 3693766 + proline--tRNA ligase catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro) gene gene3290 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17080 LI89_17085 LI89_17085 LI89_17085 3693839 3694522 - copper homeostasis protein gene gene3291 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17085 LI89_17090 LI89_17090 LI89_17090 3694595 3695011 - peptidyl-tRNA hydrolase gene gene3292 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17090 LI89_17095 LI89_17095 LI89_17095 3695014 3695562 - hypothetical protein gene gene3293 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17095 LI89_17100 LI89_17100 LI89_17100 3695800 3696000 + hypothetical protein gene gene3294 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17100 LI89_17105 LI89_17105 LI89_17105 3695987 3696247 + Rho-binding antiterminator Suppresses temperature-sensitive mutations in essential genes by modulating rho-dependent transcription termination gene gene3295 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17105 LI89_17110 LI89_17110 LI89_17110 3696334 3696648 - cytochrome C554 gene gene3296 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17110 LI89_17115 LI89_17115 tilS tilS 3696670 3698055 - tRNA(Ile)-lysidine ligase Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU%3B ATP-dependent%3B responsible for modifying the wobble-base of the CAU anticodon of tRNAIle such that it exhibits proper recognition of the AUA codon rather than the AUG codon and is in turn properly recognized by isoleucyl-tRNA synthetase gene gene3297 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17115 LI89_17120 LI89_17120 LI89_17120 3698057 3698455 - lyase gene gene3298 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17120 LI89_17125 LI89_17125 LI89_17125 3698469 3700610 - lysine decarboxylase LdcC constitutive%3B catalyzes the formation of cadaverine from lysine gene gene3299 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17125 LI89_17130 LI89_17130 LI89_17130 3700916 3701875 - acetyl-CoA carboxylase subunit alpha catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits%3B one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein gene gene3300 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17130 LI89_17135 LI89_17135 dnaE dnaE 3701888 3705370 - DNA polymerase III subunit alpha catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time%3B main replicative polymerase gene gene3301 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17135 LI89_17140 LI89_17140 rnhB rnhB 3705481 3706077 - ribonuclease HII RNH2%3B RNase HII%3B binds manganese%3B endonuclease which specifically degrades the RNA of RNA-DNA hybrids gene gene3302 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17140 LI89_17145 LI89_17145 lpxB lpxB 3706074 3707258 - lipid-A-disaccharide synthase catalyzes the formation of lipid A disaccharide from UDP-2%2C3-diacylglucosamine and 2%2C3-diacylglucosamine-1-phosphate%2C lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM gene gene3303 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17145 LI89_17150 LI89_17150 LI89_17150 3707262 3708050 - UDP-N-acetylglucosamine acyltransferase catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis gene gene3304 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17150 LI89_17155 LI89_17155 LI89_17155 3708054 3708590 - hydroxymyristoyl-ACP dehydratase gene gene3305 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17155 LI89_17160 LI89_17160 lpxD lpxD 3708753 3709775 - UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis gene gene3306 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17160 LI89_17165 LI89_17165 LI89_17165 3709779 3710276 - molecular chaperone gene gene3307 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17165 LI89_17170 LI89_17170 LI89_17170 3710435 3712819 - outer membrane protein assembly protein YaeT part of a complex with YfgL%2C YfiO%2C and NlpB involved in outer membrane protein biosynthesis%3B involved in the assembly of outer membrane proteins gene gene3308 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17170 LI89_17175 LI89_17175 LI89_17175 3712856 3714211 - zinc metallopeptidase RseP catalyzes the cleavage of RseA which activates the sigmaE-mediated stress response gene gene3309 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17175 LI89_17180 LI89_17180 cdsA cdsA 3714240 3715088 - CDP-diglyceride synthetase catalyzes the synthesis of CDP-diglyceride from CTP and phosphatidate gene gene3310 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17180 LI89_17185 LI89_17185 LI89_17185 3715098 3715856 - UDP pyrophosphate synthase catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate gene gene3311 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17185 LI89_17190 LI89_17190 LI89_17190 3716082 3717278 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase catalyzes the formation of 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose-5-phosphate gene gene3312 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17190 LI89_17195 LI89_17195 frr frr 3717501 3718058 - ribosome recycling factor Rrf%3B Frr%3B ribosome-recycling factor%3B release factor 4%3B RF4%3B recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G%3B A GTPase-dependent process results in release of 50S from 70S%3B inhibited by release factor RF-1%3B essential for viability%3B structurally similar to tRNAs gene gene3313 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17195 LI89_17200 LI89_17200 LI89_17200 3718191 3718937 - uridylate kinase gene gene3314 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17200 LI89_17205 LI89_17205 tsf tsf 3719203 3720060 - elongation factor Ts EF-Ts%3B functions during elongation stage of protein translation%3B forms a dimer%3B associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu gene gene3315 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17205 LI89_17210 LI89_17210 LI89_17210 3720189 3720914 - 30S ribosomal protein S2 gene gene3316 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17210 LI89_17215 LI89_17215 LI89_17215 3721180 3721308 + methionine aminopeptidase gene gene3317 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17215 LI89_17220 LI89_17220 LI89_17220 3721328 3722119 + methionine aminopeptidase catalyzes the removal of N-terminal amino acids from peptides and arylamides%3B generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn%2C Fe%2C or Mn gene gene3318 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17220 LI89_17225 LI89_17225 LI89_17225 3722180 3724858 + protein-PII uridylyltransferase catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein gene gene3319 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17225 LI89_17230 LI89_17230 dapD dapD 3724975 3725799 + 2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-carboxylate N-succinyltransferase catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway gene gene3320 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17230 LI89_17235 LI89_17235 LI89_17235 3725920 3726309 + hypothetical protein gene gene3321 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17235 LI89_17240 LI89_17240 LI89_17240 3726461 3726910 - flavodoxin An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group gene gene3322 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17240 LI89_17245 LI89_17245 LI89_17245 3726938 3727711 - tRNA pseudouridine synthase C catalyzes formation of pseudouridine at position 65 in tRNA-Ile1 and tRNA-Asp gene gene3323 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17245 LI89_17250 LI89_17250 LI89_17250 3727711 3728043 - hypothetical protein gene gene3324 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17250 LI89_17260 LI89_17260 LI89_17260 3728718 3729269 - secretion protein gene gene3325 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17260 LI89_17265 LI89_17265 queF queF 3729401 3730246 + 7-cyano-7-deazaguanine reductase catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis gene gene3326 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17265 LI89_17270 LI89_17270 LI89_17270 3730460 3731824 + LOG family protein gene gene3327 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17270 LI89_17275 LI89_17275 LI89_17275 3731985 3732740 + flap endonuclease-like protein similar to flap endonuclease%3B FEN family%3B protein from E. coli does not have exonuclease activity gene gene3328 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17275 LI89_17280 LI89_17280 LI89_17280 3732922 3734028 - 23S rRNA methyltransferase gene gene3329 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17280 LI89_17285 LI89_17285 LI89_17285 3734021 3734416 - hypothetical protein gene gene3330 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17285 LI89_17290 LI89_17290 LI89_17290 3734456 3735373 - transcriptional regulator Glycine cleavage system transcriptional activator%3B activates the gcvTHP operon in the presence of glycine and represses the operon in its absence gene gene3331 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17290 LI89_17295 LI89_17295 LI89_17295 3735854 3736075 - hypothetical protein gene gene3332 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17295 LI89_17300 LI89_17300 LI89_17300 3736258 3737463 + cysteine sulfinate desulfinase gene gene3333 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17300 LI89_17305 LI89_17305 LI89_17305 3737483 3737923 + Fe-S metabolism protein SufE gene gene3334 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17305 LI89_17310 LI89_17310 LI89_17310 3737927 3738736 - sulfur acceptor protein CsdL accepts sulfur from CsdA gene gene3335 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17310 LI89_17315 LI89_17315 mltA mltA 3738851 3740023 - murein transglycosylase membrane-bound%2C lytic%3B catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues gene gene3336 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17315 LI89_17320 LI89_17320 LI89_17320 3740258 3740334 + tRNA-Met tRNA gene3337 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17320 LI89_17325 LI89_17325 LI89_17325 3740437 3740513 + tRNA-Met tRNA gene3338 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17325 LI89_17330 LI89_17330 LI89_17330 3740565 3740641 + tRNA-Met tRNA gene3339 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17330 LI89_17335 LI89_17335 amiC amiC 3740852 3742102 - N-acetylmuramoyl-L-alanine amidase hydrolyzes the bond between N-acetylmuramic acid and amino acid residues in peptidoglycan gene gene3340 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17335 LI89_17340 LI89_17340 LI89_17340 3742338 3743663 + N-acetylglutamate synthase catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis gene gene3341 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17340 LI89_17345 LI89_17345 recD recD 3743694 3745595 - exonuclease V subunit alpha helicase/nuclease%3B with RecBC catalyzes the exonucleolytic cleavage of DNA%3B RecD has 5' to 3' helicase activity gene gene3342 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17345 LI89_17350 LI89_17350 recB recB 3745592 3749221 - exonuclease V subunit beta helicase/nuclease%3B with RecCD catalyzes the exonucleolytic cleavage of DNA%3B RecD has 5' to 3' helicase activity gene gene3343 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17350 LI89_17355 LI89_17355 LI89_17355 3749218 3752109 - protease degrades small peptides gene gene3344 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17355 LI89_17360 LI89_17360 recC recC 3752209 3755580 - exonuclease V subunit gamma catalyzes ATP-dependent exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield 5'-phosphooligonucleotides%3B component of the RecBCD (Exo V) helicase/nuclease complex that is essential for recombination gene gene3345 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17360 LI89_17365 LI89_17365 LI89_17365 3755731 3756117 - peptidase gene gene3346 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17365 LI89_17370 LI89_17370 LI89_17370 3756108 3756575 - membrane protein gene gene3347 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17370 LI89_17375 LI89_17375 LI89_17375 3756572 3757198 - N-terminal cleavage protein gene gene3348 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17375 LI89_17380 LI89_17380 LI89_17380 3757186 3757722 - N-terminal cleavage protein gene gene3349 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17380 LI89_17385 LI89_17385 LI89_17385 3757948 3758742 - thymidylate synthase gene gene3350 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17385 LI89_17390 LI89_17390 LI89_17390 3758749 3759621 - diacylglyceryl transferase gene gene3351 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17390 LI89_17395 LI89_17395 LI89_17395 3759749 3761995 - phosphoenolpyruvate-protein phosphotransferase member of a second PTS chain involved in nitrogen metabolism%3B PtsP phosphorylates NPr gene gene3352 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17395 LI89_17400 LI89_17400 LI89_17400 3762008 3762535 - RNA pyrophosphohydrolase hydrolyzes diadenosine polyphosphate gene gene3353 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17400 LI89_17405 LI89_17405 LI89_17405 3762561 3762779 - hypothetical protein gene gene3354 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17405 LI89_17410 LI89_17410 LI89_17410 3763233 3763919 + DNA mismatch repair protein MutH gene gene3355 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17410 LI89_17415 LI89_17415 LI89_17415 3764016 3764732 + membrane protein gene gene3356 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17415 LI89_17420 LI89_17420 tas tas 3764883 3765923 + aldo/keto reductase complements the prephenate dehydrogenase dysfunction of an Escherichia coli tyrosine auxotroph strain%3B member of the aldo/keto reductase 2 family%3B crystal structure of purified Escherichia coli protein shows bound NADPH gene gene3357 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17420 LI89_17425 LI89_17425 LI89_17425 3766153 3767367 - lysophospholipid transporter LplT gene gene3358 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17425 LI89_17430 LI89_17430 LI89_17430 3767364 3769520 - acyl-ACP synthetase Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3-phosphoethanolamine (2-acyl-GPE) formed by transacylation reactions or degradation by phospholipase A1 gene gene3359 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17430 LI89_17435 LI89_17435 LI89_17435 3769872 3772148 - biotin transporter BioY gene gene3360 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17435 LI89_17440 LI89_17440 LI89_17440 3772438 3773490 + transcriptional regulator controls transcription of galETKM gene gene3361 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17440 LI89_17445 LI89_17445 LI89_17445 3773509 3774771 - diaminopimelate decarboxylase catalyzes the decarboxylation of diaminopimelate into lysine%3B pyridoxal phosphate(PLP)-binding gene gene3362 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17445 LI89_17450 LI89_17450 LI89_17450 3774937 3775890 + transcriptional regulator activates the transcription of the lysA gene encoding diaminopimelate decarboxylase gene gene3363 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17450 LI89_17455 LI89_17455 LI89_17455 3775887 3777047 - arabinose transporter permease gene gene3364 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17455 LI89_17460 LI89_17460 LI89_17460 3777399 3778295 - LysR family transcriptional regulator gene gene3365 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17460 LI89_17465 LI89_17465 LI89_17465 3778403 3779290 + beta-lactamase gene gene3366 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17465 LI89_17470 LI89_17470 LI89_17470 3779351 3779995 + protein-disulfide isomerase gene gene3367 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17470 LI89_17475 LI89_17475 LI89_17475 3779992 3781665 - chemotaxis protein gene gene3368 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17475 LI89_17480 LI89_17480 LI89_17480 3781755 3782225 - hypothetical protein gene gene3369 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17480 LI89_17485 LI89_17485 LI89_17485 3782210 3782857 - regulatory membrane protein gene gene3370 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17485 LI89_17490 LI89_17490 LI89_17490 3783111 3783479 + hypothetical protein gene gene3371 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17490 LI89_17495 LI89_17495 LI89_17495 3783460 3784293 - prepilin peptidase gene gene3372 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17495 LI89_17500 LI89_17500 LI89_17500 3784283 3784588 - hypothetical protein gene gene3373 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17500 LI89_17505 LI89_17505 LI89_17505 3784747 3785943 - general secretion pathway protein GspL gene gene3374 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17505 LI89_17510 LI89_17510 LI89_17510 3785943 3786881 - general secretion pathway protein GspK gene gene3375 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17510 LI89_17515 LI89_17515 LI89_17515 3786897 3787490 - general secretion pathway protein GspJ gene gene3376 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17515 LI89_17520 LI89_17520 LI89_17520 3787483 3787767 - general secretion pathway protein GspI gene gene3377 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17520 LI89_17525 LI89_17525 LI89_17525 3787883 3788332 - general secretion pathway protein GspG gene gene3378 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17525 LI89_17530 LI89_17530 LI89_17530 3788352 3789560 - type II secretion system protein F gene gene3379 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17530 LI89_17535 LI89_17535 LI89_17535 3789547 3791052 - general secretion pathway protein GspE gene gene3380 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17535 LI89_17540 LI89_17540 LI89_17540 3791049 3792995 - general secretion pathway protein GspD gene gene3381 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17540 LI89_17545 LI89_17545 LI89_17545 3793032 3793553 - general secretion pathway protein GspC gene gene3382 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17545 LI89_17550 LI89_17550 LI89_17550 3793612 3794028 - hypothetical protein gene gene3383 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17550 LI89_17555 LI89_17555 LI89_17555 3794725 3795480 - carbonic anhydrase gene gene3384 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17555 LI89_17560 LI89_17560 LI89_17560 3795630 3796013 - HxlR family transcriptional regulator gene gene3385 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17560 LI89_17565 LI89_17565 LI89_17565 3796116 3796865 + short-chain dehydrogenase gene gene3386 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17565 LI89_17570 LI89_17570 LI89_17570 3796926 3797231 - chaperone-modulator protein CbpM with CpbA modulates the activity of the dnaK chaperone system%3B interacts with CbpA and inhibits both the DnaJ-like co-chaperone activity and the DNA binding activity of CbpA gene gene3387 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17570 LI89_17575 LI89_17575 LI89_17575 3797238 3798191 - DNA-binding protein functional analog of DnaJ%3B co-chaperone with DnaK%2C molecular chaperone in an adaptive response to environmental stresses other than heat shock gene gene3388 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17575 LI89_17580 LI89_17580 LI89_17580 3798381 3799463 - cytochrome C peroxidase gene gene3389 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17580 LI89_17585 LI89_17585 LI89_17585 3799856 3801163 + hexuronate transporter involved in the transport of aldohexuronates gene gene3390 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17585 LI89_17590 LI89_17590 LI89_17590 3801190 3803565 + alpha-glucosidase gene gene3391 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17590 LI89_17595 LI89_17595 LI89_17595 3803658 3804080 - hypothetical protein gene gene3392 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17595 LI89_17600 LI89_17600 LI89_17600 3804208 3804678 + AsnC family transcriptional regulator gene gene3393 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17600 LI89_17605 LI89_17605 LI89_17605 3804728 3805972 - diguanylate cyclase gene gene3394 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17605 LI89_17610 LI89_17610 LI89_17610 3806055 3806450 - hypothetical protein gene gene3395 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17610 LI89_17615 LI89_17615 LI89_17615 3806596 3807021 - arsenate reductase gene gene3396 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17615 LI89_17620 LI89_17620 LI89_17620 3807034 3808323 - arsenical pump membrane protein gene gene3397 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17620 LI89_17625 LI89_17625 LI89_17625 3808557 3808907 - arsenic resistance operon repressor gene gene3398 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17625 LI89_17630 LI89_17630 LI89_17630 3809179 3809694 + hypothetical protein gene gene3399 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17630 LI89_17635 LI89_17635 LI89_17635 3809868 3810158 - hypothetical protein gene gene3400 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17635 LI89_17640 LI89_17640 LI89_17640 3810351 3811337 - Fic family protein gene gene3401 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17640 LI89_17645 LI89_17645 LI89_17645 3811957 3812328 + hypothetical protein gene gene3402 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17645 LI89_17650 LI89_17650 LI89_17650 3813037 3813468 + prophage protein gene gene3403 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17650 LI89_17655 LI89_17655 LI89_17655 3813469 3813654 - prophage protein gene gene3404 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17655 LI89_17660 LI89_17660 LI89_17660 3813710 3814279 - hypothetical protein gene gene3405 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17660 LI89_17665 LI89_17665 LI89_17665 3814692 3815051 - hypothetical protein gene gene3406 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17665 LI89_17670 LI89_17670 LI89_17670 3815083 3815697 - phage tail assembly protein gene gene3407 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17670 LI89_17675 LI89_17675 LI89_17675 3815719 3815997 - hypothetical protein gene gene3408 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17675 LI89_17685 LI89_17685 LI89_17685 3816705 3819479 - DNA primase gene gene3409 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17685 LI89_17690 LI89_17690 LI89_17690 3819472 3819825 - prophage protein gene gene3410 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17690 LI89_17695 LI89_17695 LI89_17695 3819839 3820369 - hypothetical protein gene gene3411 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17695 LI89_17700 LI89_17700 LI89_17700 3820353 3820907 - hypothetical protein gene gene3412 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17700 LI89_17705 LI89_17705 LI89_17705 3820982 3821200 - hypothetical protein gene gene3413 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17705 LI89_17710 LI89_17710 LI89_17710 3821190 3821396 - hypothetical protein gene gene3414 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17710 LI89_17715 LI89_17715 LI89_17715 3821389 3821589 - hypothetical protein gene gene3415 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17715 LI89_17720 LI89_17720 LI89_17720 3821579 3821764 - hypothetical protein gene gene3416 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17720 LI89_17725 LI89_17725 LI89_17725 3821973 3822293 + hypothetical protein gene gene3417 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17725 LI89_17730 LI89_17730 LI89_17730 3822549 3823391 - antA/AntB antirepressor family protein gene gene3418 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17730 LI89_17735 LI89_17735 LI89_17735 3823406 3823825 - hypothetical protein gene gene3419 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17735 LI89_17740 LI89_17740 LI89_17740 3823825 3824022 - dipicolinate synthase gene gene3420 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17740 LI89_17745 LI89_17745 LI89_17745 3824243 3824698 - hypothetical protein gene gene3421 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17745 LI89_17750 LI89_17750 LI89_17750 3824717 3825046 - hypothetical protein gene gene3422 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17750 LI89_17755 LI89_17755 LI89_17755 3825191 3826405 - integrase gene gene3423 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17755 LI89_17760 LI89_17760 LI89_17760 3826570 3826643 - tRNA-Gly tRNA gene3424 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17760 LI89_17765 LI89_17765 lysS lysS 3826814 3828331 - lysine--tRNA ligase class II%3B LysRS2%3B catalyzes a two-step reaction%2C first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B in Methanosarcina barkeri%2C LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1 gene gene3425 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17765 LI89_17770 LI89_17770 LI89_17770 3828341 3829252 - peptide chain release factor 2 catalyzes the release of newly synthesized polypeptide chains at the stop codons UAA and UGA gene gene3426 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17770 LI89_17775 LI89_17775 LI89_17775 3829831 3831564 - ssDNA exonuclease RecJ 5'-3' single-stranded-DNA-specific exonuclease gene gene3427 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17775 LI89_17780 LI89_17780 LI89_17780 3831571 3832287 - protein-disulfide isomerase DsbC%3B periplasmic protein with protein disulfide isomerase activity%3B this protein also shows disulfide oxidoreductase activity gene gene3428 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17780 LI89_17785 LI89_17785 xerD xerD 3832336 3833235 - site-specific tyrosine recombinase XerD site-specific tyrosine recombinase which cuts and rejoins DNA molecules%3B binds cooperatively to specific DNA consensus sites%3B forms a heterotetrameric complex with XerC%3B XerCD exhibit similar sequences%3B essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation%3B XerD specifically exchanges the bottom strands%3B cell division protein FtsK may regulate the XerCD complex%3B enzyme from Streptococcus group has unusual active site motifs gene gene3429 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17785 LI89_17790 LI89_17790 LI89_17790 3833341 3833859 + flavodoxin FldB An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic gene gene3430 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17790 LI89_17795 LI89_17795 LI89_17795 3833931 3835352 - membrane protein gene gene3431 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17795 LI89_17800 LI89_17800 LI89_17800 3835444 3836871 - histidine kinase part of a two-component regulatory system with CreB or PhoB%3B involved in catabolic regulation gene gene3432 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17800 LI89_17805 LI89_17805 LI89_17805 3836882 3837580 - transcriptional regulator response regulator in two-component regulatory system with CreC%3B CreB protein is phosphorylated by sensor protein phospho-CreC%3B involved in catabolic regulation gene gene3433 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17805 LI89_17810 LI89_17810 LI89_17810 3837580 3838005 - membrane protein gene gene3434 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17810 LI89_17815 LI89_17815 LI89_17815 3837986 3838252 - hypothetical protein gene gene3435 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17815 LI89_17820 LI89_17820 ygfZ ygfZ 3838518 3839510 + global regulator physiological role is not clear%3B not essential for growth but mutants grow poorly%3B mutations suppress hda null mutations%3B may be involved in regulation of ATP-DnaA levels%3B may also be involved in regulation of tRNA modifications%3B can bind folic acid and tetrahydrofolate%3B forms a three domain ring-like structure with a central channel%3B structurally similar to DMGO protein from A. globiformis%3B shows sequence similarity to yeast CAF17 transcriptional regulato%3B Hda supressor gene gene3436 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17820 LI89_17825 LI89_17825 LI89_17825 3839543 3840226 - hemolysin gene gene3437 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17825 LI89_17830 LI89_17830 LI89_17830 3840464 3841066 + hydrolase gene gene3438 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17830 LI89_17835 LI89_17835 LI89_17835 3841079 3841828 - NAD(P)-binding oxidoreductase gene gene3439 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17835 LI89_17840 LI89_17840 LI89_17840 3841844 3842281 - hypothetical protein gene gene3440 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17840 LI89_17845 LI89_17845 LI89_17845 3842572 3845451 - glycine dehydrogenase acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine gene gene3441 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17845 LI89_17855 LI89_17855 LI89_17855 3845674 3846060 - glycine cleavage system protein H part of multienzyme complex composed of H%2C L%2C P%2C and T proteins which catalyzes oxidation of glycine to yield carbon dioxide%2C ammonia%2C 5%2C10-CH2-H4folate and a reduced pyridine nucleotide%3B protein H is involved in transfer of methylamine group from the P to T protein%3B covalently bound to a lipoyl cofactor gene gene3442 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17855 LI89_17860 LI89_17860 gcvT gcvT 3846127 3847224 - glycine cleavage system protein T catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate%2C causing the release of ammonia and the generation of reduced GcvH protein gene gene3443 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17860 LI89_17865 LI89_17865 LI89_17865 3847733 3848947 - oxidoreductase gene gene3444 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17865 LI89_17870 LI89_17870 LI89_17870 3849035 3850204 - 2-octaprenyl-6-methoxyphenyl hydroxylase Oxygenase that introduces the hydroxyl group at carbon four of 2-octaprenyl-6-methoxyphenol resulting in the formation of 2-octaprenyl-6-methoxy-1%2C4-benzoquinone gene gene3445 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17870 LI89_17875 LI89_17875 LI89_17875 3850208 3851521 - proline aminopeptidase P II exopeptidase able to cleave the peptide bond of the last amino acid if linked to a proline residue%3B substrate can be as short as a dipeptide gene gene3446 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17875 LI89_17880 LI89_17880 LI89_17880 3851576 3852154 - hypothetical protein the crystal structure of Haemophilus influenzae HI0817 showed that this protein forms dimers%3B function unknown gene gene3447 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17880 LI89_17885 LI89_17885 LI89_17885 3852472 3852801 + Z-ring-associated protein gene gene3448 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17885 LI89_17890 LI89_17890 LI89_17890 3853240 3853836 + 5-formyltetrahydrofolate cyclo-ligase ygfA expression increases five to eight fold in Escherichia coli cells growing as biofilms%3B unknown function gene gene3449 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17890 LI89_17895 LI89_17895 LI89_17895 3853932 3855173 - D-3-phosphoglycerate dehydrogenase catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis%3B can also reduce alpha ketoglutarate to form 2-hydroxyglutarate gene gene3450 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17895 LI89_17900 LI89_17900 LI89_17900 3855487 3856149 - ribose 5-phosphate isomerase catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway gene gene3451 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17900 LI89_17905 LI89_17905 LI89_17905 3856369 3857262 + chromosome replication initiation inhibitor protein specific inhibitor of chromosomal initiation of replication in vitro%3B binds the three 13-mers in the origin (oriC) to block initiation of replication%3B also controls genes involved in arginine transport gene gene3452 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17905 LI89_17910 LI89_17910 LI89_17910 3857264 3858019 - hypothetical protein gene gene3453 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17910 LI89_17915 LI89_17915 LI89_17915 3858105 3858722 - arginine exporter protein Involved in the export of arginine gene gene3454 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17915 LI89_17920 LI89_17920 LI89_17920 3859048 3859917 - mechanosensitive ion channel protein MscS participates in the regulation of osmotic pressure changes within the cel gene gene3455 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17920 LI89_17925 LI89_17925 LI89_17925 3860163 3861242 - fructose-bisphosphate aldolase catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1%2C6%2C bisphosphate gene gene3456 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17925 LI89_17930 LI89_17930 LI89_17930 3861406 3862569 - phosphoglycerate kinase gene gene3457 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17930 LI89_17935 LI89_17935 gapA gapA 3862672 3863688 - glyceraldehyde-3-phosphate dehydrogenase required for glycolysis%3B catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate gene gene3458 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17935 LI89_17940 LI89_17940 LI89_17940 3864028 3866022 - transketolase catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate%3B can transfer ketol groups between several groups%3B in Escherichia coli there are two tkt genes%2C tktA expressed during exponential growth and the tktB during stationary phase gene gene3459 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17940 LI89_17945 LI89_17945 LI89_17945 3866317 3867069 + metalloprotease gene gene3460 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17945 LI89_17950 LI89_17950 LI89_17950 3867151 3867471 - Rieske (2Fe-2S) protein gene gene3461 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17950 LI89_17955 LI89_17955 LI89_17955 3867612 3869591 - arginine decarboxylase catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis gene gene3462 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17955 LI89_17965 LI89_17965 LI89_17965 3870595 3871749 + S-adenosylmethionine synthetase catalyzes the formation of S-adenosylmethionine from methionine and ATP%3B methionine adenosyltransferase gene gene3463 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17965 LI89_17970 LI89_17970 LI89_17970 3871814 3872233 - membrane protein gene gene3464 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17970 LI89_17975 LI89_17975 LI89_17975 3872250 3872681 - YeeE/YedE gene gene3465 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17975 LI89_17980 LI89_17980 LI89_17980 3872678 3873007 - ArsR family transcriptional regulator gene gene3466 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17980 LI89_17985 LI89_17985 LI89_17985 3873134 3873646 + sprT gene gene3467 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17985 LI89_17990 LI89_17990 LI89_17990 3873744 3874451 + DNA-specific endonuclease I gene gene3468 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17990 LI89_17995 LI89_17995 LI89_17995 3874497 3875228 + 16S rRNA methyltransferase gene gene3469 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_17995 LI89_18000 LI89_18000 LI89_18000 3875254 3876207 + glutathione synthetase catalyzes the second step in the glutathione biosynthesis pathway%2C where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine %3D ADP + phosphate + glutathione gene gene3470 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18000 LI89_18005 LI89_18005 LI89_18005 3876395 3876958 + hypothetical protein gene gene3471 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18005 LI89_18010 LI89_18010 LI89_18010 3876958 3877380 + Holliday junction resolvase similar to RuvC resolvase with substantial differences%3B NMR structural information suggests this protein is monomeric%3B unknown cellular function gene gene3472 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18010 LI89_18015 LI89_18015 LI89_18015 3877563 3878447 + carbon-nitrogen hydrolase gene gene3473 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18015 LI89_18020 LI89_18020 LI89_18020 3878451 3879575 + agmatine deiminase catalyzes the formation of carbamoylputrescine from agmatine in the arginine decarboxylase pathway of putrescine biosynthesis gene gene3474 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18020 LI89_18025 LI89_18025 LI89_18025 3879642 3880775 - hypothetical protein gene gene3475 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18025 LI89_18030 LI89_18030 LI89_18030 3880795 3881490 + hypothetical protein gene gene3476 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18030 LI89_18035 LI89_18035 LI89_18035 3881526 3882347 + pyrroline-5-carboxylate reductase gene gene3477 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18035 LI89_18040 LI89_18040 LI89_18040 3882476 3883030 + membrane protein gene gene3478 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18040 LI89_18045 LI89_18045 LI89_18045 3883027 3883317 + hypothetical protein gene gene3479 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18045 LI89_18050 LI89_18050 LI89_18050 3883359 3883952 + nucleoside-triphosphate diphosphatase HAM1-like protein%3B Rec-dependent growth%3B RgdB%3B yggV%3B it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine gene gene3480 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18050 LI89_18055 LI89_18055 LI89_18055 3883945 3885075 + coproporphyrinogen III oxidase gene gene3481 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18055 LI89_18060 LI89_18060 LI89_18060 3885284 3886024 - hypothetical protein gene gene3482 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18060 LI89_18065 LI89_18065 LI89_18065 3886127 3887071 - glutaminase catalyzes the formation of glutamate from glutamine gene gene3483 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18065 LI89_18070 LI89_18070 LI89_18070 3887183 3887509 - hypothetical protein gene gene3484 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18070 LI89_18075 LI89_18075 trmB trmB 3887509 3888228 - tRNA (guanine-N7)-methyltransferase tRNA (guanine-N(7)-)-methyltransferase%3B catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine gene gene3485 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18075 LI89_18080 LI89_18080 LI89_18080 3888408 3889550 + adenine glycosylase gene gene3486 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18080 LI89_18085 LI89_18085 LI89_18085 3889612 3889884 + oxidative damage protection protein protects iron-sulfur proteins against oxidative damage gene gene3487 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18085 LI89_18090 LI89_18090 mltC mltC 3890022 3891098 + murein transglycosylase Murein hydrolase C%3B membrane-bound%3B lytic%3B catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues gene gene3488 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18090 LI89_18095 LI89_18095 LI89_18095 3891271 3892020 + permease gene gene3489 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18095 LI89_18100 LI89_18100 LI89_18100 3892089 3894251 - ornithine decarboxylase gene gene3490 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18100 LI89_18105 LI89_18105 LI89_18105 3894392 3894571 + hypothetical protein gene gene3491 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18105 LI89_18110 LI89_18110 LI89_18110 3894910 3894985 + tRNA-Phe tRNA gene3492 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18110 LI89_18115 LI89_18115 LI89_18115 3895350 3896078 + hypothetical protein gene gene3493 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18115 LI89_18120 LI89_18120 LI89_18120 3896094 3896579 + hypothetical protein gene gene3494 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18120 LI89_18125 LI89_18125 LI89_18125 3896633 3897448 + hypothetical protein gene gene3495 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18125 LI89_18130 LI89_18130 LI89_18130 3897805 3898476 + hypothetical protein gene gene3496 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18130 LI89_18135 LI89_18135 LI89_18135 3898966 3900039 + choloylglycine hydrolase gene gene3497 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18135 LI89_18145 LI89_18145 LI89_18145 3900426 3901835 - hypothetical protein gene gene3498 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18145 LI89_18150 LI89_18150 potE potE 3902189 3903508 - putrescine transporter catalyzes the uptake of putrescine via a proton symport mechanism%2C as well as the efflux of putrescine by a putrescine/ornithine antiport system gene gene3499 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18150 LI89_18155 LI89_18155 LI89_18155 3903630 3905792 - ornithine decarboxylase gene gene3500 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18155 LI89_18160 LI89_18160 LI89_18160 3906538 3908058 - transporter gene gene3501 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18160 LI89_18165 LI89_18165 LI89_18165 3908060 3909964 - fusaric acid resistance protein gene gene3502 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18165 LI89_18170 LI89_18170 LI89_18170 3909948 3910997 - hemolysin D gene gene3503 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18170 LI89_18175 LI89_18175 LI89_18175 3911007 3911297 - membrane protein gene gene3504 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18175 LI89_18180 LI89_18180 LI89_18180 3911407 3912870 - hydrolase gene gene3505 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18180 LI89_18185 LI89_18185 LI89_18185 3913255 3913506 + hypothetical protein gene gene3506 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18185 LI89_18190 LI89_18190 LI89_18190 3913503 3914288 + Map gene gene3507 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18190 LI89_18195 LI89_18195 LI89_18195 3914431 3915189 - iron ABC transporter ATP-binding protein gene gene3508 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18195 LI89_18200 LI89_18200 LI89_18200 3915186 3916193 - enterobactin ABC transporter permease gene gene3509 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18200 LI89_18205 LI89_18205 LI89_18205 3916183 3917142 - iron ABC transporter permease gene gene3510 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18205 LI89_18210 LI89_18210 LI89_18210 3917152 3918105 - iron ABC transporter substrate-binding protein gene gene3511 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18210 LI89_18215 LI89_18215 LI89_18215 3918404 3919435 - methyltransferase gene gene3512 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18215 LI89_18220 LI89_18220 LI89_18220 3919659 3920690 - methyltransferase gene gene3513 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18220 LI89_18225 LI89_18225 LI89_18225 3921352 3922269 + transporter gene gene3514 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18225 LI89_18230 LI89_18230 LI89_18230 3922310 3923800 - GntR family transcriptional regulator gene gene3515 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18230 LI89_18235 LI89_18235 LI89_18235 3923937 3924569 + transcriptional regulator gene gene3516 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18235 LI89_18240 LI89_18240 LI89_18240 3924922 3926325 + MFS transporter gene gene3517 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18240 LI89_18245 LI89_18245 LI89_18245 3926682 3927638 + LacI family transcriptional regulator gene gene3518 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18245 LI89_18250 LI89_18250 LI89_18250 3927663 3928733 + hydrolase gene gene3519 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18250 LI89_18255 LI89_18255 LI89_18255 3928822 3930441 + membrane protein gene gene3520 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18255 LI89_18260 LI89_18260 LI89_18260 3930522 3931049 - Isochorismatase gene gene3521 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18260 LI89_18265 LI89_18265 LI89_18265 3931228 3931788 - hypothetical protein gene gene3522 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18265 LI89_18270 LI89_18270 LI89_18270 3931972 3933474 - glycine/betaine ABC transporter gene gene3523 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18270 LI89_18275 LI89_18275 LI89_18275 3933829 3934443 - transcriptional regulator gene gene3524 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18275 LI89_18280 LI89_18280 LI89_18280 3934533 3935180 - hypothetical protein gene gene3525 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18280 LI89_18285 LI89_18285 LI89_18285 3935720 3938845 - multidrug RND transporter gene gene3526 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18285 LI89_18290 LI89_18290 LI89_18290 3938858 3940060 - hemolysin secretion protein D gene gene3527 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18290 LI89_18295 LI89_18295 LI89_18295 3940502 3943066 + diguanylate cyclase gene gene3528 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18295 LI89_18300 LI89_18300 LI89_18300 3943133 3943816 - hypothetical protein gene gene3529 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18300 LI89_18305 LI89_18305 LI89_18305 3943809 3944000 + hypothetical protein gene gene3530 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18305 LI89_18310 LI89_18310 LI89_18310 3944012 3944791 - hydroxyethylthiazole kinase gene gene3531 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18310 LI89_18315 LI89_18315 LI89_18315 3944878 3947154 - carbamoyl phosphate phosphatase carbamoyltransferase%3B involved in the formation of the cyanate group of hydrogenase%3B catalyzes the formation of carbamoyladenylate from carbamoylphosphate and then transfers the carbamoyl group to HypE gene gene3532 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18315 LI89_18320 LI89_18320 LI89_18320 3947167 3948183 - carbamoyl dehydratase HypE hydrogenase isoenzymes formation protein%3B involved in the formation of the cyanate group of the large subunit of the hydrogenase%3B catalyzes the formation of thiocyanate from thiocarbamate gene gene3533 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18320 LI89_18325 LI89_18325 LI89_18325 3948196 3949299 - hydrogenase isoenzymes formation protein HypD necessary for the synthesis of all three hydrogenase isoenzymes gene gene3534 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18325 LI89_18330 LI89_18330 LI89_18330 3949286 3949570 - hydrogenase 2 accessory protein HypG gene gene3535 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18330 LI89_18335 LI89_18335 LI89_18335 3949561 3950643 - hypothetical protein gene gene3536 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18335 LI89_18340 LI89_18340 hypA hypA 3950664 3951005 - hydrogenase nickel incorporation protein plays a role in hydrogenase nickel cofactor insertion gene gene3537 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18340 LI89_18345 LI89_18345 LI89_18345 3950998 3951495 - hydrogenase gene gene3538 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18345 LI89_18350 LI89_18350 hybD hybD 3951488 3951979 - hydrogenase 2 maturation endopeptidase protease responsible for the cleavage of a 15 amino acid peptide from the C-terminal end of the large subunit of hydrogenase 2 (HybC) gene gene3539 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18350 LI89_18355 LI89_18355 LI89_18355 3951979 3953673 - hydrogenase 2 large subunit involved in hydrogen uptake gene gene3540 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18355 LI89_18360 LI89_18360 LI89_18360 3953651 3954850 - hydrogenase 2 b cytochrome subunit HybB%3B cytochrome b subunit of the hydrogenase 2 enzyme%2C composed of HybA%2C B%2C C%2C and O subunits gene gene3541 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18360 LI89_18365 LI89_18365 LI89_18365 3954837 3955847 - hydrogenase 2 protein HybA Fe-S ferrodoxin type component%3B participates in the periplasmic electron-transferring activity of hydrogenase 2 gene gene3542 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18365 LI89_18370 LI89_18370 LI89_18370 3955850 3956965 - hydrogenase 2 small subunit involved in hydrogen uptake gene gene3543 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18370 LI89_18375 LI89_18375 LI89_18375 3957670 3958137 + membrane protein gene gene3544 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18375 LI89_18380 LI89_18380 LI89_18380 3958257 3959042 - flagellar motor protein B gene gene3545 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18380 LI89_18390 LI89_18390 LI89_18390 3959029 3960723 + flagellar biosynthesis protein FlhA gene gene3546 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18390 LI89_18395 LI89_18395 LI89_18395 3960839 3961828 - hypothetical protein gene gene3547 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18395 LI89_18400 LI89_18400 LI89_18400 3962041 3963615 - chemotaxis protein gene gene3548 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18400 LI89_18405 LI89_18405 LI89_18405 3964209 3965192 - NAD-dependent epimerase gene gene3549 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18405 LI89_18410 LI89_18410 LI89_18410 3965219 3966529 - MFS transporter gene gene3550 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18410 LI89_18415 LI89_18415 LI89_18415 3967026 3968069 + iron ABC transporter substrate-binding protein gene gene3551 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18415 LI89_18420 LI89_18420 LI89_18420 3968421 3969488 + ABC transporter permease gene gene3552 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18420 LI89_18425 LI89_18425 LI89_18425 3969485 3970528 + iron ABC transporter permease gene gene3553 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18425 LI89_18430 LI89_18430 fecE fecE 3970525 3971343 + iron-dicitrate transporter ATP-binding subunit Part of the FecBCDE citrate-dependent iron (III) transport system gene gene3554 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18430 LI89_18435 LI89_18435 LI89_18435 3971358 3972650 - enterochelin esterase gene gene3555 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18435 LI89_18440 LI89_18440 LI89_18440 3973127 3975343 + ferrichrysobactin receptor gene gene3556 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18440 LI89_18445 LI89_18445 LI89_18445 3975658 3976071 + hypothetical protein gene gene3557 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18445 LI89_18450 LI89_18450 LI89_18450 3976145 3976534 + hypothetical protein gene gene3558 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18450 LI89_18455 LI89_18455 LI89_18455 3976548 3977846 + heavy metal RND transporter gene gene3559 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18455 LI89_18460 LI89_18460 LI89_18460 3977843 3979372 + cobalt transporter gene gene3560 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18460 LI89_18465 LI89_18465 LI89_18465 3979369 3982500 + cation transporter gene gene3561 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18465 LI89_18470 LI89_18470 LI89_18470 3982567 3983232 - alpha-ketoglutarate-dependent dioxygenase oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA lesions gene gene3562 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18470 LI89_18475 LI89_18475 LI89_18475 3983773 3984372 + membrane protein gene gene3563 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18475 LI89_18480 LI89_18480 LI89_18480 3984575 3984769 + pilus assembly protein gene gene3564 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18480 LI89_18485 LI89_18485 LI89_18485 3984838 3985260 + tight adherance operon protein gene gene3565 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18485 LI89_18490 LI89_18490 LI89_18490 3985300 3986133 + tight adherance operon protein gene gene3566 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18490 LI89_18495 LI89_18495 LI89_18495 3986130 3987458 + secretin gene gene3567 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18495 LI89_18500 LI89_18500 LI89_18500 3987455 3987736 + hypothetical protein gene gene3568 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18500 LI89_18505 LI89_18505 LI89_18505 3987727 3988851 + pilus assembly protein CpaE gene gene3569 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18505 LI89_18510 LI89_18510 LI89_18510 3988868 3990154 + pilus assembly protein CpaF gene gene3570 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18510 LI89_18515 LI89_18515 LI89_18515 3990151 3991044 + tight adherance operon protein gene gene3571 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18515 LI89_18520 LI89_18520 LI89_18520 3991041 3991871 + tight adherance operon protein gene gene3572 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18520 LI89_18525 LI89_18525 LI89_18525 3991864 3992616 + tight adherance operon protein gene gene3573 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18525 LI89_18530 LI89_18530 LI89_18530 3992616 3993140 + tight adherance operon protein gene gene3574 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18530 LI89_18535 LI89_18535 LI89_18535 3993124 3993711 + pseudopilin gene gene3575 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18535 LI89_18540 LI89_18540 LI89_18540 3993740 3995122 + tight adherance operon protein gene gene3576 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18540 LI89_18545 LI89_18545 LI89_18545 3995174 3995599 - biopolymer transporter ExbD membrane spanning protein in TonB-ExbB-ExbD complex%3B involved in the tonB-independent energy-dependent transport iron-siderophore complexes and vitamin B12 into the cell gene gene3577 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18545 LI89_18550 LI89_18550 LI89_18550 3995603 3996316 - biopolymer transporter ExbB membrane spanning protein in TonB-ExbB-ExbD complex%3B involved in the tonB-independent energy-dependent transport iron-siderophore complexes and vitamin B12 into the cell gene gene3578 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18550 LI89_18555 LI89_18555 LI89_18555 3997101 3998312 + cystathionine beta-lyase catalyzes the formation of L-homocysteine from cystathionine gene gene3579 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18555 LI89_18560 LI89_18560 LI89_18560 3998516 3999178 + membrane protein gene gene3580 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18560 LI89_18565 LI89_18565 LI89_18565 3999233 4000126 - AraC family transcriptional regulator gene gene3581 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18565 LI89_18570 LI89_18570 LI89_18570 4000376 4001533 + aldehyde reductase gene gene3582 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18570 LI89_18575 LI89_18575 dkgA dkgA 4001751 4002584 + 2%2C5-diketo-D-gluconic acid reductase methylglyoxal reductase/beta-keto ester reductase%3B catalyzes the reduction of 2%2C5-diketo-D-gluconic acid to 2-keto-L-gulonic acid%3B also catalyzes the reduction of methylglyoxal%2C ethyl-2-methylacetoacetate and ethyl-acetoacetate gene gene3583 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18575 LI89_18580 LI89_18580 LI89_18580 4002594 4004897 - hypothetical protein gene gene3584 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18580 LI89_18585 LI89_18585 LI89_18585 4005112 4005336 - hypothetical protein gene gene3585 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18585 LI89_18590 LI89_18590 LI89_18590 4005563 4006984 - cell division protein FtsI septal ring component that protects the divisome from stress gene gene3586 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18590 LI89_18595 LI89_18595 LI89_18595 4007147 4007878 - acyl-phosphate glycerol 3-phosphate acyltransferase gene gene3587 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18595 LI89_18600 LI89_18600 LI89_18600 4008060 4010336 - DNA topoisomerase IV subunit A decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling gene gene3588 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18600 LI89_18605 LI89_18605 LI89_18605 4010662 4011255 + NADPH quinone reductase MdaB involved in drug resistance gene gene3589 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18605 LI89_18610 LI89_18610 LI89_18610 4011288 4011593 + quinol monooxygenase catalyzes the oxidation of menadiol to menadione gene gene3590 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18610 LI89_18615 LI89_18615 LI89_18615 4011708 4012631 - LysR family transcriptional regulator gene gene3591 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18615 LI89_18620 LI89_18620 LI89_18620 4012635 4014530 - DNA topoisomerase IV subunit B decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling gene gene3592 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18620 LI89_18625 LI89_18625 LI89_18625 4014645 4015226 - esterase Displays esterase activity toward palmitoyl-CoA and pNP-butyrate gene gene3593 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18625 LI89_18630 LI89_18630 LI89_18630 4015226 4016053 - diguanylate phosphodiesterase gene gene3594 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18630 LI89_18635 LI89_18635 LI89_18635 4016133 4016558 - dehydrogenase gene gene3595 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18635 LI89_18640 LI89_18640 nudF nudF 4016714 4017346 - ADP-ribose pyrophosphatase ADP-sugar pyrophosphatase%3B catalyzes the formation of D-ribose 5-phosphate from ADP-ribose%3B can also act on ADP-mannose and ADP-glucose gene gene3596 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18640 LI89_18645 LI89_18645 LI89_18645 4017799 4019280 + membrane protein gene gene3597 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18645 LI89_18650 LI89_18650 LI89_18650 4019529 4020218 + hypothetical protein gene gene3598 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18650 LI89_18655 LI89_18655 LI89_18655 4020229 4021389 + hypothetical protein gene gene3599 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18655 LI89_18660 LI89_18660 LI89_18660 4021627 4022409 - dioxygenase seems to be involved in biofilm formation%3B in asymptomatic bacteriuria E. coli strains 83972 and VR50%2C the ygiD gene is upregulated during biofilm formation in urine gene gene3600 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18660 LI89_18665 LI89_18665 ribB ribB 4022669 4023322 - 3%2C4-dihydroxy-2-butanone 4-phosphate synthase DHBP synthase%3B functions during riboflavin biosynthesis gene gene3601 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18665 LI89_18670 LI89_18670 LI89_18670 4023786 4024085 + hypothetical protein gene gene3602 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18670 LI89_18675 LI89_18675 LI89_18675 4024129 4025379 - transporter uncharacterized member of the APC superfamily of amino acid transporters%3B unknown function gene gene3603 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18675 LI89_18680 LI89_18680 LI89_18680 4025513 4026943 - heptose 1-phosphate adenyltransferase catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D%2CD-heptose-1%2C7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D%2CD-heptose gene gene3604 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18680 LI89_18685 LI89_18685 LI89_18685 4027070 4029922 - bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase%3B also catalyzes the reverse reaction - deadenylation%3B adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme gene gene3605 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18685 LI89_18690 LI89_18690 LI89_18690 4029946 4031253 - adenylate cyclase gene gene3606 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18690 LI89_18695 LI89_18695 LI89_18695 4031579 4032199 + hypothetical protein gene gene3607 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18695 LI89_18700 LI89_18700 LI89_18700 4032377 4033615 + tRNA nucleotidyl transferase gene gene3608 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18700 LI89_18705 LI89_18705 LI89_18705 4033690 4034508 - UDP pyrophosphate phosphatase BacA%3B phosphatase activity in Escherichia coli not kinase%3B involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell gene gene3609 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18705 LI89_18710 LI89_18710 folB folB 4034659 4035018 - dihydroneopterin aldolase catalyzes the conversion of 7%2C8-dihydroneopterin to 6-hydroxymethyl-7%2C8-dihydropterin and can also catalyze the epimerization of carbon 2' of dihydroneopterin and dihydromonapterin gene gene3610 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18710 LI89_18715 LI89_18715 LI89_18715 4035126 4035779 + glycerol-3-phosphate acyltransferase involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis%3B functions with PlsX gene gene3611 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18715 LI89_18720 LI89_18720 LI89_18720 4036040 4037053 - UGMP family protein universal genome maintenance protein%3B Kae1/Qri7/OSGEP/YgjD family protein%3B in Archaea%2C some Kae1 are found as fusion proteins similar to two distinct proteins in yeast that are involved in the KEOPS complex%3B kinase associated endopeptidase 1 (Kae1) and a serine/threonine protein kinase (Bud32)%3B in Pyrococcus Kae1 has atypical AP endonuclease activity and inhibits the kinase activity of Bud32%3B the protein is essential in Escherichia coli and Bacillus subtilis gene gene3612 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18720 LI89_18725 LI89_18725 rpsU rpsU 4037427 4037642 + 30S ribosomal protein S21 a small basic protein that is one of the last in the subunit assembly%3B omission does not prevent assembly but the subunit is inactive%3B binds central domain of 16S rRNA gene gene3613 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18725 LI89_18730 LI89_18730 dnaG dnaG 4037779 4039527 + DNA primase synthesizes RNA primers at the replication forks gene gene3614 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18730 LI89_18735 LI89_18735 LI89_18735 4039685 4041523 + RNA polymerase sigma factor RpoD sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this is the primary sigma factor of bacteria gene gene3615 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18735 LI89_18740 LI89_18740 LI89_18740 4041730 4041806 + tRNA-Met tRNA gene3616 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18740 LI89_18745 LI89_18745 LI89_18745 4041909 4042742 - restriction methylase gene gene3617 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18745 LI89_18750 LI89_18750 LI89_18750 4042858 4043199 - toxin gene gene3618 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18750 LI89_18755 LI89_18755 LI89_18755 4043220 4043537 - antitoxin gene gene3619 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18755 LI89_18760 LI89_18760 LI89_18760 4043785 4044261 - hypothetical protein gene gene3620 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18760 LI89_18765 LI89_18765 LI89_18765 4044277 4044735 - hypothetical protein gene gene3621 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18765 LI89_18770 LI89_18770 LI89_18770 4044832 4045071 - hypothetical protein gene gene3622 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18770 LI89_18775 LI89_18775 LI89_18775 4045149 4045511 - hypothetical protein gene gene3623 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18775 LI89_18780 LI89_18780 LI89_18780 4045650 4046381 - hypothetical protein gene gene3624 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18780 LI89_18785 LI89_18785 LI89_18785 4046520 4047221 - transcriptional regulator gene gene3625 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18785 LI89_18790 LI89_18790 LI89_18790 4047437 4048258 - hypothetical protein gene gene3626 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18790 LI89_18795 LI89_18795 LI89_18795 4048352 4049215 - hypothetical protein gene gene3627 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18795 LI89_18810 LI89_18810 LI89_18810 4051133 4052284 - 2-alkenal reductase gene gene3628 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18810 LI89_18815 LI89_18815 LI89_18815 4052309 4053274 - Zn-dependent protease gene gene3629 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18815 LI89_18820 LI89_18820 LI89_18820 4053252 4053749 - phosphate-starvation-inducible E family protein gene gene3630 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18820 LI89_18825 LI89_18825 LI89_18825 4053746 4055461 - sodium:proton exchanger gene gene3631 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18825 LI89_18830 LI89_18830 LI89_18830 4055465 4055905 - thioredoxin gene gene3632 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18830 LI89_18835 LI89_18835 LI89_18835 4055895 4057040 - hypothetical protein gene gene3633 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18835 LI89_18840 LI89_18840 LI89_18840 4057120 4057731 - membrane protein gene gene3634 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18840 LI89_18845 LI89_18845 LI89_18845 4057821 4058708 - hypothetical protein gene gene3635 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18845 LI89_18850 LI89_18850 LI89_18850 4058811 4059725 - hypothetical protein gene gene3636 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18850 LI89_18855 LI89_18855 LI89_18855 4059748 4060206 - heat-shock protein Hsp20 gene gene3637 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18855 LI89_18860 LI89_18860 LI89_18860 4060294 4062111 - cell division protein FtsH gene gene3638 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18860 LI89_18865 LI89_18865 LI89_18865 4062172 4062363 - phospholipase gene gene3639 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18865 LI89_18870 LI89_18870 LI89_18870 4062363 4065212 - Clp protease ClpC gene gene3640 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18870 LI89_18875 LI89_18875 LI89_18875 4065318 4065887 - heat-shock protein Hsp20 gene gene3641 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18875 LI89_18880 LI89_18880 LI89_18880 4065922 4066203 - DNA-binding protein gene gene3642 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18880 LI89_18885 LI89_18885 LI89_18885 4066432 4066695 - phospholipase D gene gene3643 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18885 LI89_18890 LI89_18890 LI89_18890 4066695 4066949 - hypothetical protein gene gene3644 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18890 LI89_18900 LI89_18900 LI89_18900 4068743 4069630 - transposase gene gene3645 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18900 LI89_18905 LI89_18905 LI89_18905 4069630 4069956 - transposase gene gene3646 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18905 LI89_18915 LI89_18915 LI89_18915 4070749 4071369 - hypothetical protein gene gene3647 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18915 LI89_18920 LI89_18920 LI89_18920 4071562 4072986 - hypothetical protein gene gene3648 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18920 LI89_18925 LI89_18925 LI89_18925 4073110 4073346 - transcriptional regulator gene gene3649 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18925 LI89_18930 LI89_18930 LI89_18930 4073859 4074578 - hypothetical protein gene gene3650 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18930 LI89_18940 LI89_18940 LI89_18940 4075275 4075889 - cell division protein Fic gene gene3651 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18940 LI89_18945 LI89_18945 LI89_18945 4075894 4077210 - integrase gene gene3652 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18945 LI89_18950 LI89_18950 LI89_18950 4077596 4078927 - hypothetical protein gene gene3653 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18950 LI89_18955 LI89_18955 LI89_18955 4078980 4080065 - hypothetical protein gene gene3654 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18955 LI89_18960 LI89_18960 LI89_18960 4080083 4081954 - glycosyl hydrolase gene gene3655 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18960 LI89_18965 LI89_18965 LI89_18965 4082310 4083170 - XRE family transcriptional regulator gene gene3656 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18965 LI89_18970 LI89_18970 murQ murQ 4083398 4084306 + N-acetylmuramic acid-6-phosphate etherase catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate%3B involved in MurNAc dissimilation pathway gene gene3657 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18970 LI89_18975 LI89_18975 murP murP 4084309 4085760 + PTS system N-acetylmuramic acid transporter subunits IIBC belongs to PEP-dependent PTS system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel%3B requires crr-encoded enzyme IIA-glucose component gene gene3658 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18975 LI89_18980 LI89_18980 LI89_18980 4085809 4086750 - glutaminase catalyzes the formation of glutamate from glutamine gene gene3659 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18980 LI89_18985 LI89_18985 LI89_18985 4086820 4088376 - amino acid transporter gene gene3660 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18985 LI89_18990 LI89_18990 LI89_18990 4088451 4089851 - glutamate decarboxylase gene gene3661 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18990 LI89_18995 LI89_18995 LI89_18995 4090209 4090667 - HxlR family transcriptional regulator gene gene3662 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_18995 LI89_19000 LI89_19000 LI89_19000 4090776 4092014 + transporter gene gene3663 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19000 LI89_19005 LI89_19005 LI89_19005 4092106 4092678 + acid-resistance membrane protein gene gene3664 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19005 LI89_19010 LI89_19010 LI89_19010 4092831 4093730 + membrane protein gene gene3665 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19010 LI89_19015 LI89_19015 fadH fadH 4093880 4095901 + 2%2C4-dienoyl-CoA reductase catalyzes the formation of trans-2- enoyl-CoA from 2%2C4-dienoyl-CoA gene gene3666 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19015 LI89_19020 LI89_19020 LI89_19020 4096129 4097319 - 23S rRNA methyltransferase gene gene3667 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19020 LI89_19025 LI89_19025 LI89_19025 4097759 4100530 + pertactin family virulence factor/autotransporter gene gene3668 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19025 LI89_19030 LI89_19030 LI89_19030 4100669 4101172 + metal-dependent hydrolase gene gene3669 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19030 LI89_19035 LI89_19035 LI89_19035 4101244 4102245 + oxidoreductase gene gene3670 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19035 LI89_19040 LI89_19040 LI89_19040 4102596 4103582 + membrane protein gene gene3671 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19040 LI89_19045 LI89_19045 LI89_19045 4103885 4105141 + serine/threonine protein kinase gene gene3672 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19045 LI89_19050 LI89_19050 LI89_19050 4105379 4105915 - membrane protein gene gene3673 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19050 LI89_19055 LI89_19055 LI89_19055 4106085 4107575 - altronate hydrolase gene gene3674 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19055 LI89_19060 LI89_19060 LI89_19060 4107586 4109037 - altronate oxidoreductase catalyzes the formation of D-tagaturonate from D-altronate gene gene3675 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19060 LI89_19065 LI89_19065 LI89_19065 4109159 4110568 - glucuronate isomerase catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate%3B functions in glucuronic and galacturonic metabolism gene gene3676 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19065 LI89_19070 LI89_19070 LI89_19070 4111096 4112397 + hexuronate transporter involved in the transport of aldohexuronates gene gene3677 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19070 LI89_19075 LI89_19075 LI89_19075 4112638 4113432 + transcriptional regulator regulates the expression of uxuBA gene gene3678 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19075 LI89_19080 LI89_19080 LI89_19080 4113685 4114179 + hypothetical protein gene gene3679 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19080 LI89_19085 LI89_19085 LI89_19085 4114374 4115066 + membrane protein gene gene3680 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19085 LI89_19090 LI89_19090 LI89_19090 4115063 4115452 + modulator protein gene gene3681 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19090 LI89_19095 LI89_19095 LI89_19095 4115638 4116024 + hypothetical protein gene gene3682 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19095 LI89_19100 LI89_19100 LI89_19100 4116149 4116454 + hypothetical protein gene gene3683 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19100 LI89_19105 LI89_19105 LI89_19105 4116457 4116852 + membrane protein gene gene3684 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19105 LI89_19110 LI89_19110 LI89_19110 4116849 4117133 + cell division protein FtsH gene gene3685 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19110 LI89_19115 LI89_19115 LI89_19115 4117445 4117840 + membrane protein gene gene3686 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19115 LI89_19120 LI89_19120 LI89_19120 4117920 4118906 + glutathionyl-hydroquinone reductase YqjG gene gene3687 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19120 LI89_19125 LI89_19125 LI89_19125 4118923 4119819 - LysR family transcriptional regulator gene gene3688 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19125 LI89_19130 LI89_19130 LI89_19130 4119935 4120639 + pirin gene gene3689 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19130 LI89_19135 LI89_19135 LI89_19135 4120705 4121760 - hydroxyacid dehydrogenase gene gene3690 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19135 LI89_19140 LI89_19140 LI89_19140 4121892 4122887 - aldehyde oxidase gene gene3691 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19140 LI89_19145 LI89_19145 LI89_19145 4123070 4123963 + LysR family transcriptional regulator gene gene3692 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19145 LI89_19150 LI89_19150 LI89_19150 4124805 4125038 + XRE family transcriptional regulator gene gene3693 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19150 LI89_19155 LI89_19155 LI89_19155 4125031 4125597 + hypothetical protein gene gene3694 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19155 LI89_19160 LI89_19160 LI89_19160 4125676 4126755 + cytosine methyltransferase gene gene3695 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19160 LI89_19165 LI89_19165 LI89_19165 4127093 4127626 - hypothetical protein gene gene3696 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19165 LI89_19170 LI89_19170 LI89_19170 4128411 4128980 + DNA invertase Pin gene gene3697 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19170 LI89_19175 LI89_19175 LI89_19175 4129212 4129883 - hypothetical protein gene gene3698 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19175 LI89_19185 LI89_19185 LI89_19185 4130492 4130734 + hypothetical protein gene gene3699 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19185 LI89_19190 LI89_19190 LI89_19190 4130783 4131196 + hypothetical protein gene gene3700 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19190 LI89_19195 LI89_19195 LI89_19195 4131295 4131492 + hypothetical protein phage-associated protein gene gene3701 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19195 LI89_19200 LI89_19200 LI89_19200 4131503 4133002 - hypothetical protein gene gene3702 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19200 LI89_19205 LI89_19205 LI89_19205 4133611 4134510 - 16S rRNA methyltransferase gene gene3704 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19205 LI89_19210 LI89_19210 LI89_19210 4134573 4136546 + penicillin-binding protein gene gene3705 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19210 LI89_19215 LI89_19215 LI89_19215 4136804 4137157 + hypothetical protein gene gene3706 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19215 LI89_19220 LI89_19220 LI89_19220 4137213 4137803 + DnaA initiator-associating protein DiaA Required for the timely initiation of chromosomal replication via direct interactions with the dnaA initiator protein gene gene3707 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19220 LI89_19225 LI89_19225 LI89_19225 4137814 4138389 + membrane protein gene gene3708 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19225 LI89_19230 LI89_19230 mtgA mtgA 4138470 4139195 - peptidoglycan transglycosylase glycosyltransferase%3B polymerizes glycan strands in the peptidoglycan gene gene3709 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19230 LI89_19235 LI89_19235 LI89_19235 4139192 4139845 - isoprenoid biosynthesis protein gene gene3710 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19235 LI89_19240 LI89_19240 LI89_19240 4140211 4142547 - aerobic respiration control sensor protein ArcB sensor-regulator protein which regulates the expression of many genes in response to respiratory growth conditions including anaerobic repression of the arc modulon%3B hybrid sensory histidine kinase in two-component regulatory system with ArcA gene gene3711 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19240 LI89_19245 LI89_19245 LI89_19245 4142678 4143580 - hypothetical protein gene gene3712 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19245 LI89_19250 LI89_19250 gltB gltB 4144278 4148738 + glutamate synthase catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate gene gene3713 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19250 LI89_19255 LI89_19255 LI89_19255 4148748 4150166 + glutamate synthase gene gene3714 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19255 LI89_19260 LI89_19260 LI89_19260 4150435 4150920 + hypothetical protein gene gene3715 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19260 LI89_19265 LI89_19265 LI89_19265 4151013 4151528 - Clp protease ClpP gene gene3716 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19265 LI89_19270 LI89_19270 sspA sspA 4151534 4152175 - stringent starvation protein A transcriptional activator%3B required for activation of bacteriophage P1 late promoter%3B induced by starvation gene gene3717 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19270 LI89_19280 LI89_19280 LI89_19280 4152570 4152962 - 30S ribosomal protein S9 gene gene3718 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19280 LI89_19285 LI89_19285 LI89_19285 4152977 4153405 - 50S ribosomal protein L13 gene gene3719 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19285 LI89_19290 LI89_19290 LI89_19290 4153737 4154879 - ATPase gene gene3720 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19290 LI89_19295 LI89_19295 LI89_19295 4155103 4155507 + cytochrome D ubiquinol oxidase subunit III gene gene3721 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19295 LI89_19300 LI89_19300 LI89_19300 4155780 4157153 + serine endoprotease DegQ gene gene3722 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19300 LI89_19305 LI89_19305 LI89_19305 4157242 4158330 + serine endoprotease gene gene3723 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19305 LI89_19310 LI89_19310 LI89_19310 4158408 4159676 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase gene gene3724 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19310 LI89_19315 LI89_19315 LI89_19315 4159798 4160052 - cell division protein BolA gene gene3725 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19315 LI89_19320 LI89_19320 LI89_19320 4160227 4160568 - anti-sigma B factor antagonist gene gene3726 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19320 LI89_19325 LI89_19325 LI89_19325 4160571 4161197 - ABC transporter substrate-binding protein involved in maintaining outer membrane lipid asymmetry gene gene3727 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19325 LI89_19330 LI89_19330 LI89_19330 4161210 4161764 - phospholipid ABC transporter substrate-binding protein gene gene3728 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19330 LI89_19335 LI89_19335 LI89_19335 4161769 4162551 - ABC transporter permease gene gene3729 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19335 LI89_19340 LI89_19340 LI89_19340 4162562 4163365 - ABC transporter ATP-binding protein ABC transporter maintaining outer membrane lipid asymmetry gene gene3730 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19340 LI89_19345 LI89_19345 LI89_19345 4163661 4164635 + sodium:calcium antiporter gene gene3731 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19345 LI89_19350 LI89_19350 LI89_19350 4164666 4165670 + D-arabinose 5-phosphate isomerase gene gene3732 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19350 LI89_19355 LI89_19355 LI89_19355 4165684 4166247 + 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase forms homotetramers%3B catalyzes hydrolysis of KDO 8-P to KDO and inorganic phosphate%3B functions in lipopolysaccharide biosynthesis gene gene3733 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19355 LI89_19360 LI89_19360 LI89_19360 4166244 4166807 + lipopolysaccharide transporter gene gene3734 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19360 LI89_19365 LI89_19365 LI89_19365 4166791 4167336 + lipopolysaccharide transporter LptA%3B periplasmic binding protein part of a putative ABC superfamily of uptake transporters%3B interacts with LptB protein%2C the ATP binding component of the uptake system gene gene3735 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19365 LI89_19370 LI89_19370 LI89_19370 4167343 4168068 + sugar ABC transporter ATP-binding protein gene gene3736 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19370 LI89_19375 LI89_19375 LI89_19375 4168127 4169560 + RNA polymerase factor sigma-54 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism%3B the rhizobia often have 2 copies of this sigma factor%3B in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation%3B in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions%2C rpoN1 gene was regulated in response to oxygen gene gene3737 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19375 LI89_19380 LI89_19380 LI89_19380 4169584 4169871 + ribosome hibernation promoting factor HPF YhbH%3B resting ribosome-binding protein involved in ribosome stabilization and preservation in stationary phase%3B binds specifically 100S ribosomes (an inactive ribosome product of a 70S ribosome dimerization)%3B seems to be involved in modulation of the sigma(54) (RpoN) activity for quorum sensing gene gene3738 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19380 LI89_19385 LI89_19385 LI89_19385 4170040 4170522 + PTS system nitrogen regulatory protein IIA(Ntr) involved in nitrogen metabolism%3B protein IIA is phosphorylated by enzyme I(Ntr) gene gene3739 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19385 LI89_19390 LI89_19390 LI89_19390 4170625 4171476 + glmZ(sRNA)-inactivating NTPase glucosamine-6-phosphate regulated%3B inactivates the glmS upregulator glmZ gene gene3740 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19390 LI89_19395 LI89_19395 LI89_19395 4171477 4171749 + phosphohistidinoprotein-hexose phosphotransferase gene gene3741 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19395 LI89_19400 LI89_19400 hypothetical protein hypothetical protein 4172072 4172370 - disrupted pseudogene gene3742 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19400 LI89_19405 LI89_19405 LI89_19405 4172798 4173733 + aspartate carbamoyltransferase catalytic subunit gene gene3743 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19405 LI89_19410 LI89_19410 LI89_19410 4173745 4174209 + aspartate carbamoyltransferase regulatory subunit involved in the allosteric regulation of aspartate carbamoyltransferase gene gene3744 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19410 LI89_19415 LI89_19415 LI89_19415 4174408 4174794 + endoribonuclease L-PSP has endoribonuclease activity on mRNA gene gene3745 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19415 LI89_19425 LI89_19425 LI89_19425 4175061 4176497 + hypothetical protein gene gene3746 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19425 LI89_19430 LI89_19430 LI89_19430 4176491 4177420 + hypothetical protein gene gene3747 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19430 LI89_19435 LI89_19435 LI89_19435 4177417 4178238 + transglutaminase gene gene3748 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19435 LI89_19440 LI89_19440 LI89_19440 4178262 4178996 + peptidase gene gene3749 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19440 LI89_19450 LI89_19450 LI89_19450 4179085 4180746 - trehalose-6-phosphate hydrolase gene gene3750 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19450 LI89_19455 LI89_19455 LI89_19455 4180845 4182260 - PTS system trehalose(maltose)-specific transporter subunits IIBC phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel gene gene3751 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19455 LI89_19460 LI89_19460 treR treR 4182475 4183422 - trehalose repressor regulates genes involved in trehalose metabolism%3B binds the intermediate trehalose-6-phosphate%3B binds a dimer%3B regulates treBC operon gene gene3752 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19460 LI89_19465 LI89_19465 LI89_19465 4183929 4186649 + magnesium ABC transporter ATPase P-type%3B involved in magnesium transport into the cytoplasm gene gene3753 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19465 LI89_19470 LI89_19470 LI89_19470 4186729 4187007 + Killer protein gene gene3754 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19470 LI89_19475 LI89_19475 LI89_19475 4187007 4187312 + XRE family transcriptional regulator gene gene3755 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19475 LI89_19480 LI89_19480 LI89_19480 4187385 4189283 - transcription antiterminator BglG gene gene3756 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19480 LI89_19485 LI89_19485 LI89_19485 4189385 4190608 - 6-phosphogluconolactonase gene gene3757 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19485 LI89_19490 LI89_19490 LI89_19490 4190718 4191458 - 2-dehydro-3-deoxyphosphooctonate aldolase gene gene3758 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19490 LI89_19495 LI89_19495 LI89_19495 4191462 4192574 - L-seryl-tRNA selenium transferase gene gene3759 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19495 LI89_19500 LI89_19500 LI89_19500 4192558 4193727 - dihydroorotase Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides gene gene3760 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19500 LI89_19505 LI89_19505 LI89_19505 4193928 4194578 - membrane protein gene gene3761 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19505 LI89_19510 LI89_19510 LI89_19510 4194600 4195376 - membrane protein gene gene3762 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19510 LI89_19515 LI89_19515 LI89_19515 4195390 4195686 - cytoplasmic protein gene gene3763 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19515 LI89_19520 LI89_19520 LI89_19520 4195686 4196051 - hypothetical protein gene gene3764 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19520 LI89_19525 LI89_19525 LI89_19525 4196075 4196419 - glycine dehydrogenase gene gene3765 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19525 LI89_19530 LI89_19530 LI89_19530 4196825 4197235 + nucleoside diphosphate kinase regulator Regulates the synthesis of nucleoside triphosphates for nucleic acid synthesis%2C CTP for lipid synthesis%2C and GTP for protein elongation gene gene3766 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19530 LI89_19535 LI89_19535 LI89_19535 4197284 4197670 - cytochrome B562 gene gene3767 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19535 LI89_19540 LI89_19540 pmbA pmbA 4197848 4199188 - peptidase PmbA protease involved in proteolytic processing of the antibiotic Microcin B17 and in sensitivity to the DNA gyrase inhibitor LetD gene gene3768 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19540 LI89_19545 LI89_19545 LI89_19545 4199357 4199902 + hypothetical protein gene gene3769 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19545 LI89_19550 LI89_19550 LI89_19550 4199955 4200221 - hypothetical protein gene gene3770 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19550 LI89_19555 LI89_19555 LI89_19555 4200226 4200699 - ribonuclease gene gene3771 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19555 LI89_19560 LI89_19560 gabD gabD 4200797 4202290 - succinate-semialdehyde dehydrogenase catalyzes the formation of succinate from succinate semialdehyde%3B NADP dependent gene gene3772 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19560 LI89_19565 LI89_19565 LI89_19565 4202412 4204367 - p-hydroxybenzoic acid efflux subunit AaeB with AaeA forms an efflux pump whose substrates are p-hydroxybenzoic acid 6-hydroxy-2-naphthoic and 2-hydroxycinnamate gene gene3773 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19565 LI89_19570 LI89_19570 LI89_19570 4204369 4205304 - p-hydroxybenzoic acid efflux subunit AaeA with AaeB forms an efflux pump whose substrates are p-hydroxybenzoic acid%2C 6-hydroxy-2-naphthoic and 2-hydroxycinnamate gene gene3774 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19570 LI89_19575 LI89_19575 LI89_19575 4205312 4205515 - transporter membrane protein AaeX%3B the gene is a member of the aaeXAB operon gene gene3775 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19575 LI89_19580 LI89_19580 LI89_19580 4205828 4206739 + transcriptional regulator for aaeXAB operon gene gene3776 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19580 LI89_19585 LI89_19585 LI89_19585 4206993 4207859 + LysR family transcriptional regulator gene gene3777 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19585 LI89_19595 LI89_19595 LI89_19595 4214505 4218950 + toxin gene gene3778 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19595 LI89_19600 LI89_19600 LI89_19600 4219028 4219339 + holin gene gene3779 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19600 LI89_19605 LI89_19605 LI89_19605 4219351 4219752 + peptidase M15 gene gene3780 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19605 LI89_19610 LI89_19610 LI89_19610 4219749 4220108 + hypothetical protein gene gene3781 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19610 LI89_19620 LI89_19620 LI89_19620 4220292 4223429 + hypothetical protein gene gene3782 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19620 LI89_19625 LI89_19625 tldD tldD 4223500 4224945 - protease TldD responsible for the proteolytic maturation of the E. coli pMccB17 plasmid-encoded microcin B17%2C an exported protein that targets the essential topoisomerase II DNA gyrase%3B degrades the E. coli plasmid F-encoded CcdA gene gene3783 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19625 LI89_19630 LI89_19630 LI89_19630 4224958 4225818 - amidohydrolase gene gene3784 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19630 LI89_19635 LI89_19635 LI89_19635 4225815 4229690 - hypothetical protein gene gene3785 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19635 LI89_19640 LI89_19640 LI89_19640 4229737 4231206 - ribonuclease G involved in the processing of the 5'end of 16S rRNA gene gene3786 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19640 LI89_19645 LI89_19645 LI89_19645 4231196 4231789 - septum formation inhibitor Maf Maf%3B overexpression in Bacillus subtilis inhibits septation in the dividing cell gene gene3787 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19645 LI89_19650 LI89_19650 LI89_19650 4231803 4232291 - rod shape-determining protein MreD part of cell wall structural complex MreBCD%3B transmembrane component gene gene3788 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19650 LI89_19655 LI89_19655 LI89_19655 4232288 4233274 - rod shape-determining protein MreC gene gene3789 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19655 LI89_19660 LI89_19660 LI89_19660 4233374 4234417 - rod shape-determining protein MreB gene gene3790 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19660 LI89_19665 LI89_19665 LI89_19665 4234752 4236671 - regulatory protein CsrD regulates the degradation of the small RNAs CsrB and CsrC%3B may function to targate RNase E to specific RNA molecules gene gene3791 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19665 LI89_19670 LI89_19670 LI89_19670 4236956 4237933 + quinone oxidoreductase gene gene3792 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19670 LI89_19675 LI89_19675 LI89_19675 4238087 4239121 + TMAO/DMSO reductase in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase%3B requires inner membrane anchor protein YedZ gene gene3793 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19675 LI89_19680 LI89_19680 LI89_19680 4239121 4239720 + sulfite oxidase subunit YedZ in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY%3B sulfite oxidase activity not demonstrated%3B contains heme gene gene3794 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19680 LI89_19685 LI89_19685 LI89_19685 4239929 4240381 + 3-dehydroquinate dehydratase gene gene3795 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19685 LI89_19690 LI89_19690 LI89_19690 4240539 4241003 + acetyl-CoA carboxylase composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex%2C the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism gene gene3796 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19690 LI89_19695 LI89_19695 LI89_19695 4241015 4242364 + acetyl-CoA carboxylase an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase%2C an enzyme that catalyzes the formation of malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism gene gene3797 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19695 LI89_19700 LI89_19700 LI89_19700 4242572 4242814 + hypothetical protein gene gene3798 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19700 LI89_19705 LI89_19705 panF panF 4242804 4244258 + sodium/panthothenate symporter mediates high affinitiy panthothenate transport which is stimulated by the presence of sodium ions%3B member of SSS family of sodium/solute symporters%3B the imported panthothenate is phosphorylated by panthothenate kinase gene gene3799 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19705 LI89_19710 LI89_19710 prmA prmA 4244352 4245233 + ribosomal protein L11 methyltransferase methylates ribosomal protein L11 at multiple amino acid positions%3B mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype gene gene3800 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19710 LI89_19715 LI89_19715 LI89_19715 4245693 4246658 + tRNA-dihydrouridine synthase B gene gene3801 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19715 LI89_19720 LI89_19720 fis fis 4246683 4246979 + Fis family transcriptional regulator Stimulates excision of phage lambda%3B affects Mu development%3B acts as an activator of rRNA and iRNA transcription gene gene3802 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19720 LI89_19725 LI89_19725 LI89_19725 4247136 4247384 - hypothetical protein gene gene3803 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19725 LI89_19730 LI89_19730 LI89_19730 4247403 4247972 - phage tail assembly protein gene gene3804 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19730 LI89_19735 LI89_19735 LI89_19735 4247986 4249647 - terminase gene gene3805 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19735 LI89_19740 LI89_19740 LI89_19740 4249634 4249987 - terminase gene gene3806 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19740 LI89_19750 LI89_19750 LI89_19750 4250262 4250708 - HNH endonuclease gene gene3807 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19750 LI89_19755 LI89_19755 LI89_19755 4250708 4250992 - bacteriophage protein gene gene3808 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19755 LI89_19760 LI89_19760 LI89_19760 4250989 4251324 - head-tail adaptor gene gene3809 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19760 LI89_19765 LI89_19765 LI89_19765 4251321 4252541 - HK97 family phage portal protein gene gene3810 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19765 LI89_19770 LI89_19770 LI89_19770 4252525 4253082 - peptidase gene gene3811 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19770 LI89_19775 LI89_19775 LI89_19775 4253125 4254297 - capsid protein gene gene3812 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19775 LI89_19780 LI89_19780 LI89_19780 4254521 4254763 - hypothetical protein gene gene3813 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19780 LI89_19785 LI89_19785 LI89_19785 4255200 4257557 - DNA primase gene gene3814 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19785 LI89_19790 LI89_19790 LI89_19790 4257554 4257748 - hypothetical protein gene gene3815 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19790 LI89_19795 LI89_19795 LI89_19795 4257751 4257921 - prophage protein gene gene3816 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19795 LI89_19800 LI89_19800 LI89_19800 4257902 4258096 - hypothetical protein gene gene3817 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19800 LI89_19805 LI89_19805 LI89_19805 4258089 4258280 - hypothetical protein gene gene3818 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19805 LI89_19810 LI89_19810 LI89_19810 4258273 4258455 - hypothetical protein gene gene3819 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19810 LI89_19815 LI89_19815 hypothetical protein hypothetical protein 4258470 4258968 - disrupted pseudogene gene3820 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19815 LI89_19820 LI89_19820 LI89_19820 4259556 4260074 - hypothetical protein gene gene3821 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19820 LI89_19825 LI89_19825 LI89_19825 4260214 4260495 - transcriptional regulator gene gene3822 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19825 LI89_19830 LI89_19830 LI89_19830 4260598 4261497 - hypothetical protein gene gene3823 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19830 LI89_19835 LI89_19835 LI89_19835 4261596 4262825 - integrase gene gene3824 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19835 LI89_19840 LI89_19840 LI89_19840 4263077 4264636 - diguanylate cyclase gene gene3825 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19840 LI89_19845 LI89_19845 LI89_19845 4264922 4265392 + membrane protein gene gene3826 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19845 LI89_19850 LI89_19850 LI89_19850 4265774 4265986 + cold-shock protein gene gene3827 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19850 LI89_19855 LI89_19855 LI89_19855 4266258 4266470 + cold-shock protein gene gene3828 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19855 LI89_19860 LI89_19860 LI89_19860 4266742 4266954 + cold-shock protein gene gene3829 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19860 LI89_19865 LI89_19865 LI89_19865 4267544 4268956 + 2-oxoglutarate translocator gene gene3830 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19865 LI89_19870 LI89_19870 LI89_19870 4269315 4270235 + lipid A biosynthesis palmitoleoyl acyltransferase Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(palmitoleoyl)-lipid IVA in cells subjected to cold shock gene gene3831 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19870 LI89_19875 LI89_19875 LI89_19875 4270308 4271846 - PhoPQ-regulated protein gene gene3832 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19875 LI89_19880 LI89_19880 LI89_19880 4272267 4273292 + amino acid ABC transporter substrate-binding protein gene gene3833 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19880 LI89_19885 LI89_19885 LI89_19885 4273355 4274533 + amino acid ABC transporter permease gene gene3834 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19885 LI89_19890 LI89_19890 LI89_19890 4274549 4275652 + amino acid ABC transporter permease gene gene3835 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19890 LI89_19895 LI89_19895 LI89_19895 4275661 4276422 + ABC transporter ATP-binding protein gene gene3836 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19895 LI89_19900 LI89_19900 LI89_19900 4276493 4277182 - LrgB gene gene3837 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19900 LI89_19905 LI89_19905 LI89_19905 4277175 4277600 - LrgA gene gene3838 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19905 LI89_19910 LI89_19910 LI89_19910 4277729 4278646 + transcriptional regulator gene gene3839 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19910 LI89_19915 LI89_19915 LI89_19915 4278662 4280311 - sodium:proton antiporter gene gene3840 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19915 LI89_19920 LI89_19920 LI89_19920 4280526 4281893 - permase gene gene3841 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19920 LI89_19925 LI89_19925 LI89_19925 4282254 4282925 - glutathione S-transferase gene gene3842 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19925 LI89_19930 LI89_19930 LI89_19930 4283121 4283672 - single-stranded DNA-binding protein binds to single stranded DNA and PriA helcase facilitate replication restart gene gene3843 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19930 LI89_19935 LI89_19935 LI89_19935 4284076 4286907 + excinuclease ABC subunit A gene gene3844 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19935 LI89_19940 LI89_19940 LI89_19940 4286966 4287319 - hypothetical protein gene gene3845 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19940 LI89_19945 LI89_19945 LI89_19945 4287823 4289016 - aromatic amino acid aminotransferase catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate gene gene3846 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19945 LI89_19950 LI89_19950 alr alr 4289074 4290153 - alanine racemase converts L-alanine to D-alanine which is used in cell wall biosynthesis%3B binds one pyridoxal phosphate per monomer%3B forms a homodimer gene gene3847 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19950 LI89_19955 LI89_19955 LI89_19955 4290183 4291589 - DNA helicase unwinds double stranded DNA gene gene3848 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19955 LI89_19960 LI89_19960 LI89_19960 4291774 4292757 + quinone oxidoreductase gene gene3849 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19960 LI89_19965 LI89_19965 LI89_19965 4292970 4293296 + hypothetical protein gene gene3850 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19965 LI89_19970 LI89_19970 LI89_19970 4293637 4293855 - phage-shock protein gene gene3851 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19970 LI89_19975 LI89_19975 LI89_19975 4294062 4295090 - tRNA-dihydrouridine synthase A gene gene3852 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19975 LI89_19980 LI89_19980 LI89_19980 4295352 4295861 + zinc uptake transcriptional repressor Acts as a negative controlling element%2C employing Zn(2+) as a cofactor to bind the operator of the repressed genes znuACB gene gene3853 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19980 LI89_19985 LI89_19985 LI89_19985 4296146 4296355 - hypothetical protein gene gene3854 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19985 LI89_19990 LI89_19990 LI89_19990 4296664 4297272 - LexA repressor Represses a number of genes involved in the response to DNA damage gene gene3855 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19990 LI89_19995 LI89_19995 LI89_19995 4297400 4297768 - diacylglycerol kinase catalyzes the phosphorylation of diacylglycerol to form diacylglycerol phosphate gene gene3856 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_19995 LI89_20000 LI89_20000 LI89_20000 4297894 4300362 + glycerol-3-phosphate acyltransferase PlsB%3B catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA gene gene3857 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20000 LI89_20005 LI89_20005 ubiA ubiA 4300420 4301286 - 4-hydroxybenzoate polyprenyltransferase catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate%2C as part of the ubiquinone biosynthesis pathway gene gene3858 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20005 LI89_20010 LI89_20010 LI89_20010 4301315 4301821 - chorismate--pyruvate lyase gene gene3859 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20010 LI89_20015 LI89_20015 LI89_20015 4302122 4303033 - maltose-binding protein gene gene3860 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20015 LI89_20020 LI89_20020 lamB lamB 4303163 4304446 - maltoporin porin involved in the transport of maltose and maltodextrins gene gene3861 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20020 LI89_20025 LI89_20025 LI89_20025 4304518 4305633 - maltose/maltodextrin transporter ATP-binding protein with malEFG is involved in import of maltose/maltodextrin gene gene3862 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20025 LI89_20030 LI89_20030 malE malE 4306293 4307504 + sugar ABC transporter substrate-binding protein functions in the MalKFGE ABC transporter complex to transport maltose into the cell by using ATP hydrolysis gene gene3863 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20030 LI89_20035 LI89_20035 malF malF 4307597 4309174 + maltose transporter membrane protein with MalKGE is involved in maltose transport into the cell gene gene3864 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20035 LI89_20040 LI89_20040 malG malG 4309188 4310078 + maltose transporter permease with MalKFE is involved in the transport of maltose into the cell gene gene3865 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20040 LI89_20045 LI89_20045 LI89_20045 4310275 4310682 - phosphate-starvation-inducible protein PsiE gene gene3866 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20045 LI89_20050 LI89_20050 pgi pgi 4310786 4312432 - glucose-6-phosphate isomerase functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis%3B catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate%3B member of PGI family gene gene3867 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20050 LI89_20055 LI89_20055 LI89_20055 4312928 4314328 + aspartate kinase catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP%3B functions in amino acid biosynthesis%3B lysine sensitive gene gene3868 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20055 LI89_20060 LI89_20060 LI89_20060 4314453 4315376 + bile acid:sodium symporter gene gene3869 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20060 LI89_20065 LI89_20065 LI89_20065 4315694 4317364 + hemolysin activation protein gene gene3870 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20065 LI89_20070 LI89_20070 LI89_20070 4317433 4322286 + hemolysin gene gene3871 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20070 LI89_20075 LI89_20075 metH metH 4322375 4326070 - B12-dependent methionine synthase one of two methionine synthases in Escherichia coli%3B MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine%3B requires zinc for activity gene gene3872 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20075 LI89_20080 LI89_20080 LI89_20080 4326311 4327150 + transcriptional repressor IclR regulates the glyoxylate bypass operon (aceBAK)%2C which encodes isocitrate lyase%2C malate synthase and isocitrate dehydrogenase kinase/phosphorylase gene gene3873 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20080 LI89_20085 LI89_20085 aceK aceK 4327457 4329184 - isocitrate dehydrogenase catalyzes the phosphorylation/dephosphorylation of the enzyme isocitrate dehydrogenase on a specific serine which regulates activity%3B unphosphorylated IDH is fully active when cells are grown on glucose while the enzyme becomes phosphorylated and inactive in the presence of acetate or ethanol gene gene3874 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20085 LI89_20090 LI89_20090 LI89_20090 4329261 4330568 - isocitrate lyase gene gene3875 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20090 LI89_20095 LI89_20095 LI89_20095 4330741 4332339 - malate synthase Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle gene gene3876 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20095 LI89_20100 LI89_20100 LI89_20100 4332745 4333674 - homoserine O-succinyltransferase catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis gene gene3877 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20100 LI89_20105 LI89_20105 LI89_20105 4334032 4334147 - 5S ribosomal RNA rRNA gene3878 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20105 LI89_20110 LI89_20110 LI89_20110 4334235 4337172 - 23S ribosomal RNA rRNA gene3879 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20110 LI89_20115 LI89_20115 LI89_20115 4337407 4337482 - tRNA-Glu tRNA gene3880 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20115 LI89_20120 LI89_20120 LI89_20120 4337615 4339163 - 16S ribosomal RNA rRNA gene3881 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20120 LI89_20130 LI89_20130 LI89_20130 4339705 4340247 + hypothetical protein gene gene3882 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20130 LI89_20135 LI89_20135 LI89_20135 4340307 4341128 - shikimate dehydrogenase gene gene3883 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20135 LI89_20140 LI89_20140 LI89_20140 4341137 4341709 - tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein involved in the biosynthesis of the threonylcarbamoyladenosine (t6A) residue at position 37 of ANN-decoding tRNAs gene gene3884 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20140 LI89_20145 LI89_20145 LI89_20145 4341717 4342253 - hypothetical protein gene gene3885 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20145 LI89_20150 LI89_20150 LI89_20150 4342295 4342768 - hypothetical protein gene gene3886 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20150 LI89_20155 LI89_20155 LI89_20155 4342740 4343861 - DNA processing protein DprA gene gene3887 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20155 LI89_20160 LI89_20160 LI89_20160 4343995 4344507 + peptide deformylase gene gene3888 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20160 LI89_20165 LI89_20165 fmt fmt 4344532 4345479 + methionyl-tRNA formyltransferase modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation%3B inactivation of this gene in Escherichia coli severely impairs growth gene gene3889 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20165 LI89_20170 LI89_20170 LI89_20170 4345590 4346879 + 16S rRNA methyltransferase catalyzes the methylation of cytosine at position 967 (m5C967) of 16S rRNA%3B SAM-dependent methyltransferase gene gene3890 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20170 LI89_20175 LI89_20175 trkA trkA 4346931 4348307 + potassium transporter peripheral membrane component involved in potassium uptake%3B found to be peripherally associated with the inner membrane in Escherichia coli%3B contains an NAD-binding domain gene gene3891 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20175 LI89_20180 LI89_20180 mscL mscL 4348427 4348837 + large-conductance mechanosensitive channel forms homopentamer%3B channel that opens in response to pressure or hypoosmotic shock gene gene3892 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20180 LI89_20185 LI89_20185 LI89_20185 4348891 4349097 - hypothetical protein gene gene3893 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20185 LI89_20190 LI89_20190 zntR zntR 4349187 4349612 - zinc-responsive transcriptional regulator mediates expression of the zinc export protein ZntA in response to high levels of zinc%3B member of MerR family of transcriptional regulators gene gene3894 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20190 LI89_20195 LI89_20195 LI89_20195 4349642 4349989 - hypothetical protein gene gene3895 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20195 LI89_20200 LI89_20200 rplQ rplQ 4350159 4350548 - 50S ribosomal protein L17 is a component of the macrolide binding site in the peptidyl transferase center gene gene3896 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20200 LI89_20205 LI89_20205 LI89_20205 4350589 4351581 - DNA-directed RNA polymerase subunit alpha catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme gene gene3897 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20205 LI89_20210 LI89_20210 LI89_20210 4351607 4352227 - 30S ribosomal protein S4 gene gene3898 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20210 LI89_20215 LI89_20215 LI89_20215 4352258 4352647 - 30S ribosomal protein S11 gene gene3899 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20215 LI89_20220 LI89_20220 LI89_20220 4352664 4353020 - 30S ribosomal protein S13 gene gene3900 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20220 LI89_20225 LI89_20225 LI89_20225 4353168 4353284 - 50S ribosomal protein L36 gene gene3901 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20225 LI89_20230 LI89_20230 secY secY 4353319 4354650 - preprotein translocase subunit SecY forms heterotrimeric complex in the membrane%3B in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG%3B the SecG subunit is not essential%3B in bacteria translocation is driven via the SecA ATPase gene gene3902 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20230 LI89_20235 LI89_20235 LI89_20235 4354658 4355092 - 50S ribosomal protein L15 gene gene3903 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20235 LI89_20240 LI89_20240 rpmD rpmD 4355096 4355275 - 50S ribosomal protein L30 L30 binds domain II of the 23S rRNA and the 5S rRNA%3B similar to eukaryotic protein L7 gene gene3904 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20240 LI89_20245 LI89_20245 LI89_20245 4355278 4355781 - 30S ribosomal protein S5 gene gene3905 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20245 LI89_20250 LI89_20250 LI89_20250 4355796 4356149 - 50S ribosomal protein L18 gene gene3906 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20250 LI89_20255 LI89_20255 LI89_20255 4356159 4356692 - 50S ribosomal protein L6 gene gene3907 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20255 LI89_20260 LI89_20260 LI89_20260 4356707 4357099 - 30S ribosomal protein S8 gene gene3908 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20260 LI89_20265 LI89_20265 rpsN rpsN 4357133 4357438 - 30S ribosomal protein S14 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit%3B similar to what is observed with proteins L31 and L33%2C some proteins in this family contain CXXC motifs that are involved in zinc binding%3B if two copies are present in a genome%2C then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc%3B the proteins in this group do not appear to have the zinc-binding motif gene gene3909 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20265 LI89_20270 LI89_20270 LI89_20270 4357452 4357991 - 50S ribosomal protein L5 gene gene3910 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20270 LI89_20275 LI89_20275 rplX rplX 4358006 4358320 - 50S ribosomal protein L24 assembly initiator protein%3B binds to 5' end of 23S rRNA and nucleates assembly of the 50S%3B surrounds polypeptide exit tunnel gene gene3911 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20275 LI89_20280 LI89_20280 LI89_20280 4358331 4358702 - 50S ribosomal protein L14 gene gene3912 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20280 LI89_20285 LI89_20285 LI89_20285 4358868 4359122 - 30S ribosomal protein S17 gene gene3913 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20285 LI89_20290 LI89_20290 LI89_20290 4359122 4359313 - 50S ribosomal protein L29 one of the stabilizing components for the large ribosomal subunit gene gene3914 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20290 LI89_20295 LI89_20295 LI89_20295 4359313 4359723 - 50S ribosomal protein L16 gene gene3915 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20295 LI89_20300 LI89_20300 LI89_20300 4359736 4360434 - 30S ribosomal protein S3 gene gene3916 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20300 LI89_20305 LI89_20305 LI89_20305 4360452 4360784 - 50S ribosomal protein L22 gene gene3917 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20305 LI89_20310 LI89_20310 LI89_20310 4360799 4361077 - 30S ribosomal protein S19 gene gene3918 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20310 LI89_20315 LI89_20315 LI89_20315 4361092 4361916 - 50S ribosomal protein L2 gene gene3919 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20315 LI89_20320 LI89_20320 rplW rplW 4361933 4362235 - 50S ribosomal protein L23 binds third domain of 23S rRNA and protein L29%3B part of exit tunnel gene gene3920 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20320 LI89_20325 LI89_20325 rplD rplD 4362232 4362837 - 50S ribosomal protein L4 L4 is important during the early stages of 50S assembly%3B it initially binds near the 5' end of the 23S rRNA gene gene3921 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20325 LI89_20330 LI89_20330 LI89_20330 4362848 4363477 - 50S ribosomal protein L3 gene gene3922 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20330 LI89_20335 LI89_20335 rpsJ rpsJ 4363510 4363821 - 30S ribosomal protein S10 NusE%3B involved in assembly of the 30S subunit%3B in the ribosome%2C this protein is involved in the binding of tRNA%3B in Escherichia coli this protein was also found to be involved in transcription antitermination%3B NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination%3B binding of NusB/S10 to boxA nucleates assembly of the antitermination complex gene gene3923 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20335 LI89_20340 LI89_20340 LI89_20340 4364202 4364675 - bacterioferritin iron storage protein gene gene3924 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20340 LI89_20345 LI89_20345 LI89_20345 4364755 4364949 - bacterioferritin gene gene3925 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20345 LI89_20350 LI89_20350 tuf tuf 4365092 4366276 - elongation factor Tu EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu gene gene3926 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20350 LI89_20355 LI89_20355 fusA fusA 4366348 4368456 - elongation factor G EF-G%3B promotes GTP-dependent translocation of the ribosome during translation%3B many organisms have multiple copies of this gene gene gene3927 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20355 LI89_20360 LI89_20360 LI89_20360 4368550 4369020 - 30S ribosomal protein S7 gene gene3928 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20360 LI89_20365 LI89_20365 LI89_20365 4369117 4369491 - 30S ribosomal protein S12 gene gene3929 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20365 LI89_20370 LI89_20370 LI89_20370 4369629 4369916 - sulfur relay protein TusB gene gene3930 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20370 LI89_20375 LI89_20375 LI89_20375 4369936 4370295 - protein TusC gene gene3931 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20375 LI89_20380 LI89_20380 LI89_20380 4370301 4370696 - sulfur transfer complex subunit TusD in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs gene gene3932 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20380 LI89_20385 LI89_20385 LI89_20385 4370696 4371418 - hypothetical protein gene gene3933 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20385 LI89_20390 LI89_20390 LI89_20390 4371686 4372501 - peptidylprolyl isomerase rotamase gene gene3934 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20390 LI89_20395 LI89_20395 LI89_20395 4372784 4373002 + lysis protein required for phi X174 lysis gene gene3935 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20395 LI89_20400 LI89_20400 LI89_20400 4373068 4373652 - peptidylprolyl isomerase rotamase gene gene3936 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20400 LI89_20405 LI89_20405 LI89_20405 4373747 4373968 - hypothetical protein gene gene3937 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20405 LI89_20410 LI89_20410 LI89_20410 4373983 4375791 - potassium transporter KefB involved in potassium efflux gene gene3938 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20410 LI89_20415 LI89_20415 LI89_20415 4375794 4376345 - potassium transporter KefG required for KefB activity gene gene3939 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20415 LI89_20420 LI89_20420 LI89_20420 4376635 4378551 + ABC transporter ATP-binding protein gene gene3940 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20420 LI89_20425 LI89_20425 LI89_20425 4378593 4379582 + glycosyl transferase gene gene3941 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20425 LI89_20430 LI89_20430 LI89_20430 4379674 4380645 + glycosyl transferase gene gene3942 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20430 LI89_20435 LI89_20435 tauD tauD 4380680 4381528 - taurine dioxygenase catalyzes the conversion of taurine (2-aminoethanesulfonate) to sulfite and aminoacetaldehyde concurrently with the conversion of alpha-ketoglutarate to succinate and carbon dioxide%3B non-heme iron oxidase%3B allows the use of taurine as an alternative sulfur source%3B forms homodimers gene gene3943 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20435 LI89_20440 LI89_20440 LI89_20440 4381525 4382415 - taurine transporter subunit gene gene3944 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20440 LI89_20445 LI89_20445 tauB tauB 4382412 4383179 - taurine transporter ATP-binding subunit Part of the ABC transporter complex tauABC involved in taurine import gene gene3945 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20445 LI89_20450 LI89_20450 tauA tauA 4383188 4384216 - taurine ABC transporter substrate-binding protein with TauB and TauC is responsible for taurine uptake. gene gene3946 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20450 LI89_20455 LI89_20455 LI89_20455 4384403 4385185 - PhzF family phenazine biosynthesis protein gene gene3947 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20455 LI89_20460 LI89_20460 LI89_20460 4385206 4385808 - alcohol dehydrogenase gene gene3948 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20460 LI89_20465 LI89_20465 LI89_20465 4385910 4386908 + hydrolase gene gene3949 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20465 LI89_20470 LI89_20470 LI89_20470 4386905 4387141 + hypothetical protein gene gene3950 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20470 LI89_20475 LI89_20475 LI89_20475 4387283 4388152 + phosphoribulokinase gene gene3951 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20475 LI89_20480 LI89_20480 LI89_20480 4388295 4388702 - hypothetical protein gene gene3952 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20480 LI89_20485 LI89_20485 LI89_20485 4389037 4389669 + Crp/Fnr family transcriptional regulator cAMP receptor protein%3B complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons gene gene3953 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20485 LI89_20490 LI89_20490 LI89_20490 4389742 4391862 + membrane protein gene gene3954 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20490 LI89_20495 LI89_20495 argD argD 4392050 4393267 - acetylornithine aminotransferase DapATase%3B bifunctional enzyme that functions in arginine and lysine biosynthetic pathways%3B catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2%2C6-diaminoheptanedioate gene gene3955 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20495 LI89_20500 LI89_20500 LI89_20500 4393400 4393975 - anthranilate synthase component II TrpG%3B with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine%3B TrpG provides the glutamine amidotransferase activity gene gene3956 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20500 LI89_20505 LI89_20505 LI89_20505 4393996 4395507 - ATP-binding protein gene gene3957 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20505 LI89_20510 LI89_20510 LI89_20510 4395641 4396210 - peptidylprolyl isomerase gene gene3958 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20510 LI89_20515 LI89_20515 LI89_20515 4396563 4397876 + diacetylchitobiose-6-phosphate hydrolase catalyzes the fromation of N-acetyl-D-glucosamine and N-acetyl-D-glucosamine-6-phosphate from diacetylchitobiose-6-phosphate gene gene3959 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20515 LI89_20520 LI89_20520 LI89_20520 4397958 4398938 + LacI family transcriptional regulator gene gene3960 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20520 LI89_20525 LI89_20525 LI89_20525 4399251 4400435 + transporter gene gene3961 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20525 LI89_20530 LI89_20530 LI89_20530 4400485 4401780 - cytosine deaminase Catalyzes the deamination of cytosine to uracil and ammonia gene gene3962 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20530 LI89_20535 LI89_20535 LI89_20535 4402061 4404607 + nitrite reductase gene gene3963 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20535 LI89_20540 LI89_20540 nirD nirD 4404604 4404930 + nitrite reductase involved in reducing nitrite to ammonium to detoxify nitrite accumulation in anaerobic nitrate-respiring cells and regenerate NAD+%3B bounds to NirB%2C the cytoplasmic subunit%2C whose expression is induced at high nitrate concentrations gene gene3964 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20540 LI89_20545 LI89_20545 LI89_20545 4404995 4405801 + nitrite transporter NirC member of the FNT family of formate and nitrite transporters gene gene3965 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20545 LI89_20550 LI89_20550 cysG cysG 4405995 4407413 + siroheme synthase multifunction enzyme consisting of uroporphyrin-III C-methyltransferase%2C precorrin-2 dehydrogenase and sirohydrochlorin ferrochelatase%3B catalyzes the methylation of uroporphyrinogen III to form precorrin-2%2C then catalyzes formation of sirohydrochlorin from precorrin-2 and finally catalyzed the formation of siroheme from sirohydrochlorin gene gene3966 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20550 LI89_20555 LI89_20555 LI89_20555 4407470 4408510 - tryptophanyl-tRNA synthetase gene gene3967 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20555 LI89_20560 LI89_20560 LI89_20560 4408512 4409210 - phosphoglycolate phosphatase catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate gene gene3968 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20560 LI89_20565 LI89_20565 LI89_20565 4409203 4409880 - ribulose-phosphate 3-epimerase gene gene3969 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20565 LI89_20570 LI89_20570 LI89_20570 4409984 4410796 - DNA adenine methylase gene gene3970 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20570 LI89_20575 LI89_20575 LI89_20575 4410880 4411878 - hypothetical protein gene gene3971 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20575 LI89_20580 LI89_20580 aroB aroB 4412020 4413108 - 3-dehydroquinate synthase catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate%3B functions in aromatic amino acid biosynthesis gene gene3972 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20580 LI89_20585 LI89_20585 aroK aroK 4413165 4413686 - shikimate kinase type I enzyme similar to type II but differentially regulated%3B major shikimate kinase in fully repressed cells%3B catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis gene gene3973 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20585 LI89_20590 LI89_20590 hofQ hofQ 4414034 4415353 - porin outer membrane porin probably involved in uptake of extracellular double-stranded DNA%3B similar to outer membrane competence protein ComE from Haemophilus influenzae and outer membrane protein PilQ involved in type IV pilus production from Pseudomonas aeruginosa gene gene3974 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20590 LI89_20595 LI89_20595 LI89_20595 4415389 4415739 - pilus assembly protein PilP gene gene3975 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20595 LI89_20600 LI89_20600 LI89_20600 4415750 4416325 - pilus assembly protein PilO gene gene3976 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20600 LI89_20605 LI89_20605 LI89_20605 4416318 4416866 - pilus assembly protein PilN gene gene3977 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20605 LI89_20610 LI89_20610 LI89_20610 4416866 4417738 - pilus assembly protein HofM gene gene3978 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20610 LI89_20615 LI89_20615 mrcA mrcA 4417858 4420413 + penicillin-binding protein 1A bifunctional murein transglycosylase/murein transpeptidase%3B penicillin-binding protein 1A%3B involved in the synthesis of cross-linked peptidoglycan from the lipid intermediates in cell wall formation%3B penicillin-insensitive transglycosylase catalyzes the formation of linear glycan strands and the penicillin-sensitive transpeptidase catalyzes the cross-linking of the peptide subunits gene gene3979 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20615 LI89_20620 LI89_20620 nudE nudE 4420483 4421040 - adenosine nucleotide hydrolase ADP-sugar pyrophosphatase%3B catalyzes the formation of D-ribose 5-phosphate from ADP-ribose%3B can also act on ADP-mannose and ADP-glucose gene gene3980 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20620 LI89_20625 LI89_20625 LI89_20625 4421596 4423743 + Intracellular growth attenuator protein igaA gene gene3981 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20625 LI89_20630 LI89_20630 LI89_20630 4423920 4424597 + nucleotidase gene gene3982 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20630 LI89_20635 LI89_20635 LI89_20635 4424634 4425041 + ribosome-associated heat shock protein Hsp15 gene gene3983 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20635 LI89_20640 LI89_20640 hslO hslO 4425071 4425985 + Hsp33-like chaperonin becomes active under oxidative stress%3B four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive%3B oxidative stress results in oxidized cysteines%2C release of zinc%2C and binding of Hsp33 to aggregation-prone proteins%3B forms dimers and higher order oligomers gene gene3984 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20640 LI89_20645 LI89_20645 LI89_20645 4426185 4427804 + phosphoenolpyruvate carboxykinase PEP carboxykinase%3B PEP carboxylase%3B PEPCK%3B catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP gene gene3985 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20645 LI89_20650 LI89_20650 envZ envZ 4427969 4429321 - osmolarity sensor protein membrane-localized osmosensor%3B histidine kinase%3B in high osmolarity EnvZ autophosphorylates itself and transfers phosphoryl group to OmpR gene gene3986 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20650 LI89_20655 LI89_20655 ompR ompR 4429318 4430037 - osmolarity response regulator part of two-component system EnvZ/OmpR%3B regulates transcription of outer membrane porin genes ompC/F%3B under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR%3B the result is increased expression of ompC and repression of ompF%3B also functions in regulation of other genes%3B forms dimers upon phosphorylation gene gene3987 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20655 LI89_20660 LI89_20660 LI89_20660 4430158 4430655 - transcription elongation factor GreB gene gene3988 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20660 LI89_20665 LI89_20665 LI89_20665 4430955 4433339 + transcription accessory protein gene gene3989 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20665 LI89_20670 LI89_20670 LI89_20670 4433975 4434199 + iron transporter gene gene3990 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20670 LI89_20675 LI89_20675 feoB feoB 4434293 4436608 + ferrous iron transporter B cytoplasmic membrane ferrous uptake system permease%3B mutations disrupt the ability of Escherichia coli to take up ferrous iron%3B GTP-binding protein which requires GTP for efficient iron(II) uptake gene gene3991 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20675 LI89_20680 LI89_20680 LI89_20680 4436622 4436870 + ferrous iron transporter C regulatory protein that controls transcription of feoABC genes gene gene3992 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20680 LI89_20685 LI89_20685 LI89_20685 4437049 4437312 - hypothetical protein gene gene3993 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20685 LI89_20690 LI89_20690 LI89_20690 4437427 4438203 - carboxylesterase Shows carboxylesterase activity with a preference for short chain fatty acid esters%3B involved in pimeloyl-CoA synthesis gene gene3994 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20690 LI89_20695 LI89_20695 LI89_20695 4438261 4438944 + competence protein ComF gene gene3995 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20695 LI89_20700 LI89_20700 LI89_20700 4439004 4439579 + Fe/S biogenesis protein NfuA cytoplasmic protein that may be involved in the utilization of double-stranded DNA as a carbon source gene gene3996 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20700 LI89_20705 LI89_20705 malQ malQ 4439895 4441991 - 4-alpha-glucanotransferase amylomaltase%3B acts to release glucose from maltodextrins gene gene3997 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20705 LI89_20710 LI89_20710 LI89_20710 4442004 4444409 - maltose phosphorylase gene gene3998 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20710 LI89_20715 LI89_20715 LI89_20715 4444728 4447439 + transcriptional regulator MalT Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides gene gene3999 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20715 LI89_20720 LI89_20720 LI89_20720 4447495 4448466 - hypothetical protein gene gene4000 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20720 LI89_20725 LI89_20725 glpE glpE 4448666 4448992 + thiosulfate sulfurtransferase belongs to rhodanese family%3B thiosulfate thiotransferase%3B in Escherichia coli this enzyme catalyzes the formation of thiocyanate from thiosulfate and cyanide with low efficiency%3B contains an active site cysteine gene gene4001 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20725 LI89_20730 LI89_20730 LI89_20730 4449062 4449898 + intramembrane serine protease GlpG protease responsible for the cleavage between Ser and Asp residues of proteins in regions of high local hydrophilicity gene gene4002 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20730 LI89_20735 LI89_20735 LI89_20735 4449934 4450692 + transcriptional regulator represses the glpD%2C glpFK%2C glpTQ%2C and glpACB operons involved in glycerol-3-phosphate metabolism gene gene4003 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20735 LI89_20745 LI89_20745 glpD glpD 4451505 4453019 + glycerol-3-phosphate dehydrogenase in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions%3B anaerobic expression is repressed by the arcAB system%3B converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8%3B associates with the cytoplasmic membrane gene gene4004 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20745 LI89_20750 LI89_20750 LI89_20750 4453107 4455554 - maltodextrin phosphorylase gene gene4005 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20750 LI89_20755 LI89_20755 glgA glgA 4455600 4457030 - glycogen synthase catalyzes the formation of alpha-1%2C4-glucan chains from ADP-glucose gene gene4006 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20755 LI89_20760 LI89_20760 glgC glgC 4457039 4458325 - glucose-1-phosphate adenylyltransferase catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate gene gene4007 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20760 LI89_20765 LI89_20765 LI89_20765 4458335 4460323 - glycogen debranching protein catalyzes the hydrolysis of the alpha-1%2C6-glucosidic linkages in partially depolymerized glycogen gene gene4008 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20765 LI89_20770 LI89_20770 LI89_20770 4460325 4462508 - glycogen branching protein gene gene4009 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20770 LI89_20775 LI89_20775 LI89_20775 4463002 4464699 + histidine kinase gene gene4010 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20775 LI89_20780 LI89_20780 LI89_20780 4464696 4465592 - transcriptional regulator gene gene4011 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20780 LI89_20785 LI89_20785 LI89_20785 4465700 4466485 + alpha-acetolactate decarboxylase gene gene4012 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20785 LI89_20790 LI89_20790 LI89_20790 4466650 4468329 + acetolactate synthase catalyzes the formation of 2-acetolactate from pyruvate in stationary phase gene gene4013 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20790 LI89_20795 LI89_20795 LI89_20795 4468430 4469533 - aspartate-semialdehyde dehydrogenase catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde gene gene4014 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20795 LI89_20800 LI89_20800 LI89_20800 4469760 4470353 + antibiotic transporter gene gene4015 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20800 LI89_20805 LI89_20805 idnK idnK 4470470 4470982 - gluconate kinase gene gene4016 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20805 LI89_20810 LI89_20810 LI89_20810 4471204 4472520 + gluconate transporter gene gene4017 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20810 LI89_20815 LI89_20815 LI89_20815 4472559 4473554 - transcriptional regulator gene gene4018 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20815 LI89_20820 LI89_20820 LI89_20820 4473851 4474546 - quercetin 2%2C3-dioxygenase gene gene4019 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20820 LI89_20825 LI89_20825 LI89_20825 4474934 4475434 + GCN5 family acetyltransferase gene gene4020 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20825 LI89_20830 LI89_20830 LI89_20830 4475502 4476398 - inosose dehydratase gene gene4021 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20830 LI89_20835 LI89_20835 LI89_20835 4476532 4477545 - inositol 2-dehydrogenase gene gene4022 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20835 LI89_20840 LI89_20840 LI89_20840 4477625 4479565 - 3D-(3%2C5/4)-trihydroxycyclohexane-1%2C2-dione hydrolase gene gene4023 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20840 LI89_20845 LI89_20845 LI89_20845 4480036 4481955 + 5-dehydro-2-deoxygluconokinase gene gene4024 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20845 LI89_20850 LI89_20850 LI89_20850 4482240 4483073 + Fe-S cluster assembly protein HesB gene gene4025 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20850 LI89_20855 LI89_20855 LI89_20855 4483168 4483992 - 5-deoxyglucuronate isomerase gene gene4026 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20855 LI89_20860 LI89_20860 LI89_20860 4484048 4485553 - methylmalonate-semialdehyde dehydrogenase gene gene4027 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20860 LI89_20865 LI89_20865 LI89_20865 4486073 4486909 + inosose isomerase gene gene4028 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20865 LI89_20870 LI89_20870 LI89_20870 4487052 4488266 - MFS transporter gene gene4029 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20870 LI89_20875 LI89_20875 LI89_20875 4488362 4489321 + LysR family transcriptional regulator gene gene4030 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20875 LI89_20880 LI89_20880 LI89_20880 4489416 4490105 - hypothetical protein gene gene4031 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20880 LI89_20885 LI89_20885 LI89_20885 4490643 4491440 + hydrolase gene gene4032 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20885 LI89_20890 LI89_20890 LI89_20890 4491686 4492276 - cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase catalyzes the formation of adenosylcobalamide from cobinamide and the formation of coenzyme B12 from cob(I)alamin gene gene4033 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20890 LI89_20895 LI89_20895 LI89_20895 4492298 4493944 - fumarate hydratase catalyzes the formation of malate from fumerate gene gene4034 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20895 LI89_20900 LI89_20900 LI89_20900 4494213 4495133 - LysR family transcriptional regulator gene gene4035 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20900 LI89_20910 LI89_20910 LI89_20910 4495700 4496482 + uroporphyrin-III methyltransferase catalyzes 2 sequential methylations%2C the formation of precorrin-1 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and uroporphyrin III%2C and the formation of precorrin-2 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and precorrin-1 gene gene4036 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20910 LI89_20915 LI89_20915 LI89_20915 4496525 4497385 + GHMP kinase gene gene4037 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20915 LI89_20920 LI89_20920 LI89_20920 4497842 4498288 + methylaspartate mutase gene gene4038 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20920 LI89_20925 LI89_20925 LI89_20925 4498285 4499676 + glutamate mutase gene gene4039 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20925 LI89_20930 LI89_20930 LI89_20930 4499691 4501136 + glutamate mutase methylaspartate mutase subunit E%3B catalyzes the formation of threo-beta-methyl-L-aspartate from L-glutamate gene gene4040 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20930 LI89_20935 LI89_20935 LI89_20935 4501136 4502380 + methylaspartate ammonia-lyase gene gene4041 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20935 LI89_20940 LI89_20940 LI89_20940 4502382 4503755 + 3-methylaspartate ammonia-lyase gene gene4042 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20940 LI89_20945 LI89_20945 LI89_20945 4503752 4504069 + acyl-CoA synthetase gene gene4043 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20945 LI89_20950 LI89_20950 LI89_20950 4504231 4505556 + C4-dicarboxylate ABC transporter gene gene4044 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20950 LI89_20955 LI89_20955 LI89_20955 4505640 4506842 - membrane protein gene gene4045 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20955 LI89_20960 LI89_20960 LI89_20960 4507154 4508650 + phosphate transporter PitA involved in the transport of inorganic phosphate gene gene4046 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20960 LI89_20965 LI89_20965 LI89_20965 4508758 4509093 - universal stress protein UspB ppGpp-dependent%2C membrane associated%2C stress protein produced under conditions of nutrient deprivation%2C osmotic shock and oxidative stress gene gene4047 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20965 LI89_20970 LI89_20970 LI89_20970 4509786 4510232 + universal stress global response regulator UspA involved in resistance to DNA-damaging agents gene gene4048 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20970 LI89_20975 LI89_20975 LI89_20975 4510496 4511839 + glutamate dehydrogenase converts 2-oxoglutarate to glutamate%3B in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction%3B uses NADPH%3B forms a homohexamer gene gene4049 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20975 LI89_20980 LI89_20980 LI89_20980 4512058 4513359 + peptidase M10 gene gene4050 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20980 LI89_20985 LI89_20985 LI89_20985 4513418 4514170 - methyltransferase predicted SAM-dependent methyltransferase gene gene4051 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20985 LI89_20990 LI89_20990 LI89_20990 4514174 4516216 - oligopeptidase A gene gene4052 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20990 LI89_20995 LI89_20995 LI89_20995 4516553 4517395 + ribosomal RNA large subunit methyltransferase J gene gene4053 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_20995 LI89_21000 LI89_21000 LI89_21000 4517497 4518849 + glutathione reductase catalyzes the reduction of 2 glutathione to glutathione disulfide%3B maintains high levels of reduced glutathione in the cytosol%3B involved in redox regulation and oxidative defense gene gene4054 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21000 LI89_21005 LI89_21005 LI89_21005 4519213 4519962 - hypothetical protein gene gene4055 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21005 LI89_21010 LI89_21010 LI89_21010 4520284 4521717 - hypothetical protein gene gene4056 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21010 LI89_21015 LI89_21015 LI89_21015 4521707 4523341 - hypothetical protein gene gene4057 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21015 LI89_21020 LI89_21020 LI89_21020 4523338 4524378 - hypothetical protein gene gene4058 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21020 LI89_21025 LI89_21025 LI89_21025 4524380 4525675 - hypothetical protein gene gene4059 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21025 LI89_21035 LI89_21035 LI89_21035 4526414 4527070 - hypothetical protein gene gene4060 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21035 LI89_21040 LI89_21040 LI89_21040 4527238 4527564 - hypothetical protein gene gene4061 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21040 LI89_21045 LI89_21045 LI89_21045 4527566 4528288 - hypothetical protein gene gene4062 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21045 LI89_21050 LI89_21050 LI89_21050 4528278 4528931 - HAD family hydrolase gene gene4063 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21050 LI89_21055 LI89_21055 LI89_21055 4528940 4529566 - phosphodiesterase gene gene4064 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21055 LI89_21060 LI89_21060 LI89_21060 4529563 4530324 - glycosyl transferase family 2 gene gene4065 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21060 LI89_21065 LI89_21065 LI89_21065 4530358 4530906 - dTDP-4-dehydrorhamnose 3%2C5-epimerase gene gene4066 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21065 LI89_21070 LI89_21070 LI89_21070 4530911 4531789 - dTDP-4-dehydrorhamnose reductase gene gene4067 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21070 LI89_21075 LI89_21075 LI89_21075 4532623 4533615 - glycosyltransferase gene gene4068 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21075 LI89_21085 LI89_21085 LI89_21085 4535077 4537050 - hypothetical protein gene gene4069 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21085 LI89_21090 LI89_21090 transposase transposase 4537223 4538087 - disrupted pseudogene gene4070 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21090 LI89_21100 LI89_21100 LI89_21100 4538603 4539505 - multidrug DMT transporter permease gene gene4071 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21100 LI89_21105 LI89_21105 LI89_21105 4539664 4540233 + DNA-binding protein gene gene4072 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21105 LI89_21110 LI89_21110 LI89_21110 4540249 4541241 + hypothetical protein gene gene4073 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21110 LI89_21115 LI89_21115 LI89_21115 4541297 4544542 - autotransporter gene gene4074 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21115 LI89_21120 LI89_21120 LI89_21120 4544960 4545949 + membrane protein gene gene4075 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21120 LI89_21125 LI89_21125 LI89_21125 4545973 4546737 + CDP-diacylglycerol pyrophosphatase gene gene4076 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21125 LI89_21130 LI89_21130 LI89_21130 4546742 4548862 - hypothetical protein gene gene4077 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21130 LI89_21135 LI89_21135 LI89_21135 4548981 4549772 - c-di-GMP phosphodiesterase in Escherichia coli this protein is involved in flagellar function gene gene4078 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21135 LI89_21140 LI89_21140 LI89_21140 4550000 4550200 + tautomerase gene gene4079 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21140 LI89_21145 LI89_21145 LI89_21145 4550345 4551289 + ketodeoxygluconokinase catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate-6-phosphate from 2-dehydro-3-deoxy-D-gluconate gene gene4080 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21145 LI89_21150 LI89_21150 LI89_21150 4551453 4552955 - peptidase gene gene4081 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21150 LI89_21155 LI89_21155 LI89_21155 4553369 4554661 - C4-dicarboxylate transporter involved in the transport of C4-dicarboxylates across the membrane gene gene4082 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21155 LI89_21160 LI89_21160 LI89_21160 4555039 4555518 - hypothetical protein gene gene4083 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21160 LI89_21165 LI89_21165 LI89_21165 4555643 4557361 - pectate lyase gene gene4084 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21165 LI89_21170 LI89_21170 LI89_21170 4557438 4558142 - porin gene gene4085 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21170 LI89_21175 LI89_21175 LI89_21175 4558991 4560487 - histidine kinase gene gene4086 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21175 LI89_21180 LI89_21180 LI89_21180 4560751 4564257 - cellulose synthase cellulose is produced by the multicellular morphotypes of E. coli and Salmonella typhimurium%3B the cellulose biosynthesis genes bcsA%2C bcsB%2C bcsZ and bcsC are constitutively transcribed%2C however%2C cellulose synthesis is dependent on the expression of adrA gene gene4087 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21180 LI89_21185 LI89_21185 LI89_21185 4564239 4565366 - endo-1%2C4-D-glucanase catalyzes the hydrolysis of 1%2C4-beta-D-glucosidic linkages in cellulose%2C lichenin and cereal beta-D-glucans gene gene4088 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21185 LI89_21190 LI89_21190 LI89_21190 4565372 4567675 - cellulose synthase binds the cellulose synthase activator%2C bis-(3'-5') cyclic diguanylic acid (c-di-GMP) gene gene4089 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21190 LI89_21195 LI89_21195 bcsA bcsA 4567686 4569947 - cellulose synthase polymerizes uridine 5'-diphosphate glucose to cellulose%3B acts with BcsB%2C BcsZ and BcsC in cellulose biosynthesis gene gene4090 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21195 LI89_21200 LI89_21200 LI89_21200 4569922 4570314 - hypothetical protein gene gene4091 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21200 LI89_21205 LI89_21205 LI89_21205 4570311 4571048 - cell division protein gene gene4092 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21205 LI89_21210 LI89_21210 LI89_21210 4571052 4571243 - hypothetical protein gene gene4093 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21210 LI89_21215 LI89_21215 LI89_21215 4571440 4572999 + cellulose biosynthesis protein BcsE gene gene4094 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21215 LI89_21220 LI89_21220 LI89_21220 4572996 4573184 + membrane protein gene gene4095 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21220 LI89_21225 LI89_21225 LI89_21225 4573187 4574839 + membrane protein gene gene4096 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21225 LI89_21230 LI89_21230 dppF dppF 4575220 4576224 - peptide ABC transporter ATP-binding protein Part of the ABC transporter complex DppABCDF involved in the transport of dipeptides gene gene4097 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21230 LI89_21235 LI89_21235 dppD dppD 4576239 4577219 - peptide ABC transporter ATP-binding protein DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF gene gene4098 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21235 LI89_21240 LI89_21240 LI89_21240 4577235 4578137 - peptide transporter gene gene4099 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21240 LI89_21245 LI89_21245 LI89_21245 4578148 4579167 - peptide transporter gene gene4100 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21245 LI89_21250 LI89_21250 LI89_21250 4579456 4581063 - peptide ABC transporter substrate-binding protein DppABCDF is involved in the transport of dipeptides%3B also binds heme and mediates chemotaxis to dipeptides gene gene4101 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21250 LI89_21255 LI89_21255 LI89_21255 4581746 4583128 - heme utilization protein gene gene4102 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21255 LI89_21260 LI89_21260 LI89_21260 4583157 4584749 - hemolysin secretion protein ShlB gene gene4103 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21260 LI89_21265 LI89_21265 LI89_21265 4584918 4586030 - heme utilization protein gene gene4104 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21265 LI89_21270 LI89_21270 LI89_21270 4586256 4586332 - tRNA-Pro tRNA gene4105 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21270 LI89_21275 LI89_21275 LI89_21275 4586449 4587780 - MFS transporter gene gene4106 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21275 LI89_21280 LI89_21280 LI89_21280 4587874 4589406 - histidine kinase gene gene4107 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21280 LI89_21285 LI89_21285 LI89_21285 4589403 4589993 - transcriptional regulator response regulator in two-component regulatory system wtih UhpB%3B phosphorylated UhpA is a positive activator uhpT%2C a hexose phosphates transporter gene gene4108 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21285 LI89_21290 LI89_21290 LI89_21290 4590105 4591796 - phosphoethanolamine transferase catalyzes the addition of a phosphoethanolamine group to the outer Kdo residue of lipopolysaccharide gene gene4109 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21290 LI89_21295 LI89_21295 LI89_21295 4592056 4592481 - organic hydroperoxide resistance protein gene gene4110 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21295 LI89_21300 LI89_21300 LI89_21300 4592602 4594065 - membrane protein gene gene4111 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21300 LI89_21305 LI89_21305 proY proY 4594333 4595730 - proline-specific permease cryptic permease that may be involved in the transport of proline across the inner membrane%3B in Salmonella typhimurium%2C the proY gene is silent unless overexpressed on a multicopy plasmid or activated by a proZ mutation gene gene4112 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21305 LI89_21310 LI89_21310 LI89_21310 4595840 4597375 - histidine ammonia-lyase catalyzes the degradation of histidine to urocanate and ammmonia gene gene4113 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21310 LI89_21315 LI89_21315 LI89_21315 4597372 4599063 - urocanate hydratase catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism gene gene4114 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21315 LI89_21320 LI89_21320 LI89_21320 4599431 4599583 - hypothetical protein gene gene4115 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21320 LI89_21330 LI89_21330 LI89_21330 4600495 4602948 - fimbrial assembly protein gene gene4116 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21330 LI89_21335 LI89_21335 LI89_21335 4602926 4603258 - hypothetical protein gene gene4117 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21335 LI89_21345 LI89_21345 DNA recombinase DNA recombinase 4603679 4603985 - disrupted pseudogene gene4118 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21345 LI89_21355 LI89_21355 LI89_21355 4604239 4605432 - mannose-6-phosphate isomerase gene gene4119 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21355 LI89_21360 LI89_21360 LI89_21360 4605454 4606854 - 6-phospho-beta-glucosidase gene gene4120 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21360 LI89_21365 LI89_21365 LI89_21365 4606924 4609116 - beta-1%2C4 mannanase gene gene4121 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21365 LI89_21370 LI89_21370 LI89_21370 4609127 4610461 - maltoporin gene gene4122 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21370 LI89_21375 LI89_21375 LI89_21375 4610705 4611979 - cytochrome C biogenesis protein CcmF gene gene4123 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21375 LI89_21380 LI89_21380 LI89_21380 4612164 4612478 + PTS lactose transporter subunit IIB gene gene4124 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21380 LI89_21385 LI89_21385 LI89_21385 4612489 4613814 + cytochrome C biogenesis protein CcmF gene gene4125 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21385 LI89_21390 LI89_21390 LI89_21390 4613845 4614150 + molecular chaperone TorD gene gene4126 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21390 LI89_21395 LI89_21395 LI89_21395 4614227 4615147 + transcriptional regulator gene gene4127 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21395 LI89_21400 LI89_21400 LI89_21400 4615232 4616194 + transcriptional regulator gene gene4128 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21400 LI89_21405 LI89_21405 LI89_21405 4616228 4616701 - acetyltransferase gene gene4129 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21405 LI89_21410 LI89_21410 LI89_21410 4618288 4620621 - DNA primase gene gene4130 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21410 LI89_21415 LI89_21415 LI89_21415 4620635 4620976 - hypothetical protein gene gene4131 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21415 LI89_21420 LI89_21420 LI89_21420 4620973 4621236 - hypothetical protein gene gene4132 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21420 LI89_21425 LI89_21425 LI89_21425 4621233 4621778 - CI repressor gene gene4133 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21425 LI89_21430 LI89_21430 LI89_21430 4621783 4621971 - hypothetical protein gene gene4134 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21430 LI89_21435 LI89_21435 LI89_21435 4622019 4622276 - hypothetical protein gene gene4135 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21435 LI89_21440 LI89_21440 LI89_21440 4622876 4623595 + hypothetical protein gene gene4136 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21440 LI89_21445 LI89_21445 LI89_21445 4624224 4624535 + hypothetical protein gene gene4137 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21445 LI89_21450 LI89_21450 LI89_21450 4624602 4625417 - hypothetical protein gene gene4138 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21450 LI89_21455 LI89_21455 LI89_21455 4625434 4626609 - integrase gene gene4139 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21455 LI89_21460 LI89_21460 LI89_21460 4626996 4628189 - XylR family transcriptional regulator gene gene4140 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21460 LI89_21465 LI89_21465 LI89_21465 4628273 4629457 - sugar ABC transporter permease gene gene4141 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21465 LI89_21470 LI89_21470 LI89_21470 4629444 4630976 - xylose transporter with XylFH is part of the high affinity xylose ABC transporter gene gene4142 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21470 LI89_21475 LI89_21475 xylF xylF 4631068 4632063 - D-xylose transporter subunit XylF periplasmic substrate-binding component of the ATP-dependent xylose transport system%3B high affinity gene gene4143 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21475 LI89_21480 LI89_21480 LI89_21480 4632442 4633761 + xylose isomerase catalyzes the interconversion of D-xylose to D-xylulose gene gene4144 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21480 LI89_21485 LI89_21485 LI89_21485 4633954 4635414 + xylulose kinase catalyzes the formation of D-xylulose-5-phosphate fro D-xylulose gene gene4145 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21485 LI89_21490 LI89_21490 LI89_21490 4635464 4636231 - fimbrial assembly protein gene gene4146 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21490 LI89_21500 LI89_21500 LI89_21500 4636485 4637513 + isochorismatase gene gene4147 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21500 LI89_21505 LI89_21505 LI89_21505 4637516 4638442 + AraC family transcriptional regulator gene gene4148 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21505 LI89_21510 LI89_21510 LI89_21510 4638435 4639427 - acetyltransferase involved in enterobacterial common antigen biosynthesis%3B catalyzes the addition of O-acetyl groups to the N-acetyl-D-glucosamine residues of the trisaccharide repeat units of the enterobacterial common antigen gene gene4149 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21510 LI89_21515 LI89_21515 LI89_21515 4639803 4641032 + multidrug transporter gene gene4150 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21515 LI89_21520 LI89_21520 LI89_21520 4641098 4642990 - selenocysteinyl-tRNA-specific translation factor gene gene4151 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21520 LI89_21525 LI89_21525 LI89_21525 4642987 4644375 - selenocysteine synthase catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis gene gene4152 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21525 LI89_21530 LI89_21530 LI89_21530 4644407 4645336 - formate dehydrogenase required for the formation of active formate dehydrogenase gene gene4153 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21530 LI89_21535 LI89_21535 LI89_21535 4645336 4645986 - formate dehydrogenase cytochrome b556(FDO) component%3B heme containing gene gene4154 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21535 LI89_21540 LI89_21540 LI89_21540 4645983 4646954 - formate dehydrogenase beta subunit%3B involved in the use of formate as an electron donor during aerobic respiration%3B acts to transfer electrons from the major(alpha subunit) to the cytochrome b556(gamma subunit) gene gene4155 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21540 LI89_21545 LI89_21545 LI89_21545 4646967 4649378 - formate dehydrogenase gene gene4156 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21545 LI89_21550 LI89_21550 LI89_21550 4649427 4650014 - sulfate ABC transporter substrate-binding protein gene gene4157 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21550 LI89_21555 LI89_21555 LI89_21555 4650229 4651071 + formate dehydrogenase gene gene4158 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21555 LI89_21560 LI89_21560 LI89_21560 4651198 4651821 + superoxide dismutase SodA%3B manganese binding%3B only present under aerobic conditions%3B destroys free radicals gene gene4159 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21560 LI89_21565 LI89_21565 LI89_21565 4652141 4654090 + chemotaxis protein gene gene4160 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21565 LI89_21570 LI89_21570 LI89_21570 4654169 4654840 + 6-N-hydroxylaminopurine resistance protein gene gene4161 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21570 LI89_21575 LI89_21575 LI89_21575 4654996 4655415 - twitching motility protein PilT gene gene4162 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21575 LI89_21580 LI89_21580 LI89_21580 4655412 4655639 - AbrB family transcriptional regulator gene gene4163 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21580 LI89_21585 LI89_21585 LI89_21585 4655771 4656127 - hypothetical protein gene gene4164 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21585 LI89_21590 LI89_21590 LI89_21590 4656220 4657701 - GntR family transcriptional regulator gene gene4165 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21590 LI89_21595 LI89_21595 LI89_21595 4657845 4658456 + membrane protein gene gene4166 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21595 LI89_21600 LI89_21600 LI89_21600 4658453 4659007 - transcriptional regulator gene gene4167 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21600 LI89_21605 LI89_21605 LI89_21605 4659104 4660264 - mannitol-1-phosphate 5-dehydrogenase gene gene4168 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21605 LI89_21610 LI89_21610 LI89_21610 4660339 4662261 - PTS system mannitol-specific transporter subunit IICBA catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B subunit IIC forms the translocation channel and contains the specific substrate-binding site%3B subunit IIA is phosphorylated and transfers the phosphoryl group to the IIB subunit%3B subunit IIB transfers the phosphoryl group to the substrate gene gene4169 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21610 LI89_21615 LI89_21615 LI89_21615 4663340 4664059 - hypothetical protein gene gene4170 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21615 LI89_21620 LI89_21620 glyS glyS 4664182 4666251 - glycyl-tRNA ligase glycine--tRNA ligase beta chain%3B glyS%3B class II aminoacyl tRNA synthetase%3B tetramer of alpha(2)beta(2)%3B catalyzes a two-step reaction%3B first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP%3B second by transfer of the aminoacyl-adenylate to its tRNA gene gene4171 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21620 LI89_21625 LI89_21625 LI89_21625 4666261 4667175 - glycyl-tRNA synthetase gene gene4172 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21625 LI89_21630 LI89_21630 LI89_21630 4667430 4668002 + DNA-3-methyladenine glycosidase gene gene4173 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21630 LI89_21635 LI89_21635 LI89_21635 4667999 4668454 + acetyltransferase gene gene4174 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21635 LI89_21640 LI89_21640 LI89_21640 4668575 4670017 + hypothetical protein gene gene4175 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21640 LI89_21645 LI89_21645 LI89_21645 4670109 4672274 + hypothetical protein gene gene4176 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21645 LI89_21650 LI89_21650 LI89_21650 4672536 4673195 + membrane protein gene gene4177 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21650 LI89_21655 LI89_21655 LI89_21655 4673273 4673917 - transcriptional regulator gene gene4178 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21655 LI89_21660 LI89_21660 LI89_21660 4674103 4675545 + MFS transporter gene gene4179 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21660 LI89_21665 LI89_21665 LI89_21665 4675701 4676681 + bifunctional glyoxylate/hydroxypyruvate reductase B catalyzes the formation of glycolate from glyoxylate and glycerate from hydroxypyruvate gene gene4180 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21665 LI89_21670 LI89_21670 malS malS 4676835 4678901 + alpha-amylase periplasmic enzyme that degrades maltodextrins that enter via the outer membrane porin LamB%3B hydrolyzes alpha-(1%2C4) glycosidic linkages%3B contains internal disulfide bonds gene gene4181 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21670 LI89_21675 LI89_21675 avtA avtA 4679036 4680289 + valine--pyruvate aminotransferase transaminase C%3B catalyzes transamination of alanine%2C valine%2C and 2-aminobutyrate with their respective 2-keto acids%3B also catalyzes terminal step in valine biosynthesis gene gene4182 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21675 LI89_21680 LI89_21680 LI89_21680 4680466 4682124 - transporter gene gene4183 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21680 LI89_21685 LI89_21685 LI89_21685 4682388 4682861 - molecular chaperone gene gene4184 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21685 LI89_21690 LI89_21690 LI89_21690 4682986 4683399 - heat shock protein IbpA with IbpB associates with aggregated proteins to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress gene gene4185 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21690 LI89_21695 LI89_21695 LI89_21695 4683782 4684120 + hypothetical protein gene gene4186 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21695 LI89_21700 LI89_21700 LI89_21700 4684122 4685423 - biopolymer transporter Tol gene gene4187 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21700 LI89_21705 LI89_21705 LI89_21705 4685565 4686524 + hypothetical protein gene gene4188 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21705 LI89_21710 LI89_21710 LI89_21710 4686521 4687456 + ornithine cyclodeaminase catalyzes the formation of L-proline from L-ornithine gene gene4189 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21710 LI89_21715 LI89_21715 LI89_21715 4687533 4688414 + beta-glucoside kinase gene gene4190 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21715 LI89_21720 LI89_21720 LI89_21720 4688529 4689338 - sugar phosphatase YidA%3B catalyzes the dephosphorylation of erythrose 4-phosphate (preferred substrate)%2C mannose 1-phosphate and p-nitrophenyl phosphate%3B hydrolyzes the alpha-D-glucose-1-phosphate but not the beta form%3B member of the haloacid dehalogenase-like hydrolases superfamily and Cof family of proteins gene gene4191 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21720 LI89_21725 LI89_21725 gyrB gyrB 4689505 4691919 - DNA gyrase subunit B negatively supercoils closed circular double-stranded DNA gene gene4192 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21725 LI89_21730 LI89_21730 recF recF 4691939 4693024 - recombination protein F Required for DNA replication%3B binds preferentially to single-stranded%2C linear DNA gene gene4193 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21730 LI89_21735 LI89_21735 LI89_21735 4693189 4694289 - DNA polymerase III subunit beta binds the polymerase to DNA and acts as a sliding clamp gene gene4194 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21735 LI89_21740 LI89_21740 dnaA dnaA 4694294 4695682 - chromosomal replication initiation protein binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication%3B can also affect transcription of multiple genes including itself. gene gene4195 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21740 LI89_21745 LI89_21745 rpmH rpmH 4696387 4696527 + 50S ribosomal protein L34 in Escherichia coli transcription of this gene is enhanced by polyamines gene gene4196 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21745 LI89_21750 LI89_21750 rnpA rnpA 4696546 4696905 + ribonuclease P protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus%3B this enzyme also cleaves other RNA substrates gene gene4197 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21750 LI89_21755 LI89_21755 LI89_21755 4697129 4698775 + membrane protein insertase functions to insert inner membrane proteins into the IM in Escherichia coli%3B interacts with transmembrane segments%3B functions in both Sec-dependent and -independent membrane insertion%3B similar to Oxa1p in mitochondria gene gene4198 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21755 LI89_21760 LI89_21760 trmE trmE 4698943 4700307 + tRNA modification GTPase TrmE in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine%2C which is found in the wobble position of some tRNAs and affects ribosomal frameshifting%3B shows potassium-dependent dimerization and GTP hydrolysis%3B also involved in regulation of glutamate-dependent acid resistance and activation of gadE gene gene4199 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21760 LI89_21765 LI89_21765 LI89_21765 4700416 4701615 + trans-2-enoyl-CoA reductase enzyme from Treponema denticola exhibits NADH-dependent trans-2-enoyl-CoA reductase activity gene gene4200 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21765 LI89_21770 LI89_21770 LI89_21770 4701846 4702655 + methionine-binding protein gene gene4201 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21770 LI89_21775 LI89_21775 LI89_21775 4702667 4703683 + methionine ABC transporter ATP-binding protein gene gene4202 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21775 LI89_21780 LI89_21780 LI89_21780 4703683 4704345 + methionine ABC transporter permease gene gene4203 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21780 LI89_21785 LI89_21785 LI89_21785 4704500 4706404 - chemotaxis protein gene gene4204 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21785 LI89_21790 LI89_21790 LI89_21790 4706664 4707236 + hypothetical protein gene gene4205 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21790 LI89_21795 LI89_21795 LI89_21795 4707344 4708693 + histidine kinase gene gene4206 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21795 LI89_21800 LI89_21800 LI89_21800 4708668 4709276 + LuxR family transcriptional regulator gene gene4207 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21800 LI89_21805 LI89_21805 LI89_21805 4709386 4709877 + GlcG gene gene4208 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21805 LI89_21810 LI89_21810 LI89_21810 4709947 4711275 - adenine permease PurP involved in the transport or adenine gene gene4209 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21810 LI89_21815 LI89_21815 LI89_21815 4711545 4712213 + 6-phosphogluconate phosphatase gene gene4210 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21815 LI89_21820 LI89_21820 LI89_21820 4712210 4712965 - ABC transporter permease gene gene4211 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21820 LI89_21825 LI89_21825 LI89_21825 4712967 4713704 - amino acid ABC transporter permease gene gene4212 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21825 LI89_21830 LI89_21830 LI89_21830 4713791 4714645 - amino acid ABC transporter substrate-binding protein gene gene4213 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21830 LI89_21835 LI89_21835 LI89_21835 4714891 4715508 - membrane protein gene gene4214 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21835 LI89_21840 LI89_21840 LI89_21840 4715875 4716597 - transcriptional regulator PhoU regulates several genes involved in high affinity phosphate uptake%3B under conditions of high phosphate concentrations downregulates the PHO regulon gene gene4215 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21840 LI89_21845 LI89_21845 LI89_21845 4716668 4717444 - phosphate ABC transporter ATP-binding protein gene gene4216 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21845 LI89_21850 LI89_21850 pstA pstA 4717545 4718432 - phosphate transporter permease subunit PtsA Part of the ABC transporter complex PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions gene gene4217 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21850 LI89_21855 LI89_21855 pstC pstC 4718434 4719390 - phosphate transporter permease subunit PstC part of the ATP-dependent phosphate uptake system PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions gene gene4218 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21855 LI89_21860 LI89_21860 LI89_21860 4719575 4720615 - phosphate ABC transporter substrate-binding protein gene gene4219 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21860 LI89_21865 LI89_21865 LI89_21865 4720958 4722787 - glucosamine--fructose-6-phosphate aminotransferase Catalyzes the first step in hexosamine metabolism%2C converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source gene gene4220 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21865 LI89_21870 LI89_21870 glmU glmU 4723119 4724489 - bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase forms a homotrimer%3B catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc%3B function in cell wall synthesis gene gene4221 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21870 LI89_21875 LI89_21875 atpC atpC 4725004 4725426 - ATP synthase F0F1 subunit epsilon part of catalytic core of ATP synthase%3B alpha(3)beta(3)gamma(1)delta(1)epsilon(1)%3B involved in producing ATP from ADP in the presence of the proton motive force across the membrane gene gene4222 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21875 LI89_21880 LI89_21880 LI89_21880 4725448 4726830 - ATP synthase F0F1 subunit beta gene gene4223 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21880 LI89_21885 LI89_21885 LI89_21885 4726987 4727850 - ATP F0F1 synthase subunit gamma Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit gene gene4224 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21885 LI89_21890 LI89_21890 LI89_21890 4727912 4729453 - ATP F0F1 synthase subunit alpha produces ATP from ADP in the presence of a proton gradient across the membrane%3B the alpha chain is a catalytic subunit gene gene4225 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21890 LI89_21895 LI89_21895 LI89_21895 4729468 4730001 - ATP F0F1 synthase subunit delta Produces ATP from ADP in the presence of a proton gradient across the membrane%3B the delta subunit is part of the catalytic core of the ATP synthase complex gene gene4226 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21895 LI89_21900 LI89_21900 LI89_21900 4730016 4730486 - ATP F0F1 synthase subunit B Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel. gene gene4227 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21900 LI89_21905 LI89_21905 LI89_21905 4730547 4730786 - ATP F0F1 synthase subunit C Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0 gene gene4228 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21905 LI89_21910 LI89_21910 LI89_21910 4730836 4731660 - ATP synthase F0F1 subunit A Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0 gene gene4229 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21910 LI89_21915 LI89_21915 LI89_21915 4731716 4732099 - ATP synthase F0F1 subunit I gene gene4230 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21915 LI89_21920 LI89_21920 gidB gidB 4732767 4733387 - 16S rRNA methyltransferase glucose-inhibited division protein B%3B SAM-dependent methyltransferase%3B methylates the N7 position of guanosine in position 527 of 16S rRNA gene gene4231 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21920 LI89_21925 LI89_21925 LI89_21925 4733534 4735423 - hypothetical protein gene gene4232 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21925 LI89_21935 LI89_21935 LI89_21935 4133213 4133591 - bacterial RNase P gene gene3703 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21935 LI89_21940 LI89_21940 transposase transposase 100282 101789 + disrupted pseudogene gene4323 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21940 LI89_21945 LI89_21945 transposase transposase 1036 2056 - disrupted pseudogene gene4233 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21945 LI89_21950 LI89_21950 transposase transposase 2436 3673 + disrupted pseudogene gene4234 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21950 LI89_21955 LI89_21955 LI89_21955 4150 4722 + hypothetical protein gene gene4235 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21955 LI89_21960 LI89_21960 LI89_21960 4922 5845 + cation transporter gene gene4236 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21960 LI89_21965 LI89_21965 LI89_21965 6102 6743 - resolvase gene gene4237 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21965 LI89_21970 LI89_21970 LI89_21970 6911 9949 + transposase gene gene4238 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21970 LI89_21975 LI89_21975 LI89_21975 9973 10995 + transposase gene gene4239 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21975 LI89_21985 LI89_21985 hypothetical protein hypothetical protein 12146 12487 - disrupted pseudogene gene4240 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21985 LI89_21990 LI89_21990 LI89_21990 12512 12700 - hypothetical protein gene gene4241 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21990 LI89_21995 LI89_21995 LI89_21995 12697 13023 - hypothetical protein gene gene4242 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_21995 LI89_22000 LI89_22000 LI89_22000 13234 13413 + hypothetical protein gene gene4243 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22000 LI89_22005 LI89_22005 LI89_22005 13430 13627 - hypothetical protein gene gene4244 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22005 LI89_22010 LI89_22010 LI89_22010 14298 14780 - hypothetical protein gene gene4245 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22010 LI89_22015 LI89_22015 LI89_22015 14953 15237 + hypothetical protein gene gene4246 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22015 LI89_22020 LI89_22020 LI89_22020 15218 15955 - hypothetical protein gene gene4247 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22020 LI89_22025 LI89_22025 LI89_22025 15958 17349 - hypothetical protein gene gene4248 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22025 LI89_22030 LI89_22030 LI89_22030 17346 18215 - hypothetical protein gene gene4249 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22030 LI89_22035 LI89_22035 LI89_22035 18615 18890 + hypothetical protein gene gene4250 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22035 LI89_22040 LI89_22040 LI89_22040 19057 20457 - hypothetical protein gene gene4251 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22040 LI89_22050 LI89_22050 LI89_22050 21041 21394 + hypothetical protein gene gene4252 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22050 LI89_22055 LI89_22055 LI89_22055 21505 21825 + hypothetical protein gene gene4253 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22055 LI89_22060 LI89_22060 LI89_22060 22037 22354 + hypothetical protein gene gene4254 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22060 LI89_22065 LI89_22065 LI89_22065 22359 23225 + protein-disulfide isomerase gene gene4255 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22065 LI89_22070 LI89_22070 LI89_22070 23282 23647 + hypothetical protein gene gene4256 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22070 LI89_22075 LI89_22075 LI89_22075 23664 23936 + hypothetical protein gene gene4257 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22075 LI89_22080 LI89_22080 LI89_22080 23946 24596 + hypothetical protein gene gene4258 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22080 LI89_22085 LI89_22085 LI89_22085 24598 25386 + hypothetical protein gene gene4259 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22085 LI89_22090 LI89_22090 LI89_22090 25386 26633 + conjugal transfer protein TraB gene gene4260 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22090 LI89_22095 LI89_22095 LI89_22095 26657 27163 + type IV conjugative transfer system protein TraV gene gene4261 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22095 LI89_22100 LI89_22100 LI89_22100 27163 29736 + conjugal transfer protein TraC gene gene4262 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22100 LI89_22105 LI89_22105 LI89_22105 29750 31789 + conjugal transfer protein TraN gene gene4263 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22105 LI89_22115 LI89_22115 LI89_22115 33390 33623 + hypothetical protein gene gene4264 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22115 LI89_22120 LI89_22120 LI89_22120 33778 35361 + conjugal transfer protein TraU gene gene4265 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22120 LI89_22125 LI89_22125 LI89_22125 35361 36080 + conjugal transfer protein TrbC gene gene4266 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22125 LI89_22140 LI89_22140 LI89_22140 36984 37847 + conjugal transfer protein TraF gene gene4267 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22140 LI89_22145 LI89_22145 LI89_22145 37857 39245 + pilus assembly protein gene gene4268 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22145 LI89_22150 LI89_22150 LI89_22150 39242 42895 + hypothetical protein gene gene4269 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22150 LI89_22155 LI89_22155 LI89_22155 42986 43246 + hypothetical protein gene gene4270 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22155 LI89_22160 LI89_22160 LI89_22160 43309 43653 + hypothetical protein gene gene4271 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22160 LI89_22165 LI89_22165 LI89_22165 43657 44163 + hypothetical protein gene gene4272 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22165 LI89_22175 LI89_22175 LI89_22175 44837 45883 - hypothetical protein gene gene4273 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22175 LI89_22180 LI89_22180 LI89_22180 46156 46635 - Hcp1 family type VI secretion system effector gene gene4274 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22180 LI89_22185 LI89_22185 LI89_22185 46682 46888 - hypothetical protein gene gene4275 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22185 LI89_22190 LI89_22190 LI89_22190 46881 47534 - hypothetical protein gene gene4276 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22190 LI89_22195 LI89_22195 LI89_22195 47862 48626 + hypothetical protein gene gene4277 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22195 LI89_22200 LI89_22200 LI89_22200 49218 49499 + hypothetical protein gene gene4278 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22200 LI89_22205 LI89_22205 LI89_22205 49594 50220 - hypothetical protein gene gene4279 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22205 LI89_22210 LI89_22210 LI89_22210 50756 51589 + hypothetical protein gene gene4280 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22210 LI89_22215 LI89_22215 LI89_22215 51685 52566 - restriction endonuclease gene gene4281 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22215 LI89_22220 LI89_22220 LI89_22220 52743 55751 - transposase gene gene4282 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22220 LI89_22225 LI89_22225 LI89_22225 55915 56487 + recombinase gene gene4283 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22225 LI89_22230 LI89_22230 LI89_22230 56496 56837 + hypothetical protein gene gene4284 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22230 LI89_22235 LI89_22235 LI89_22235 56861 57883 + transposase gene gene4285 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22235 LI89_22240 LI89_22240 LI89_22240 58431 59219 + transcriptional regulator gene gene4286 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22240 LI89_22245 LI89_22245 LI89_22245 59332 59805 + PTS system N-acetylgalactosamine-specific transporter subunit IIB catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake%3B involved in N-acetylgalactosamine transport gene gene4287 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22245 LI89_22250 LI89_22250 LI89_22250 59822 60595 + PTS system N-acetylgalactosamine-specific transporter subunit IIC catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake%3Binvolved in N-acetylgalactosamine transport gene gene4288 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22250 LI89_22255 LI89_22255 LI89_22255 60585 61451 + PTS system N-acetylgalactosamine-specific transporter subunit IID catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IID with IIC forms the translocation channel%3B involved in N-acetylgalactosamine transport gene gene4289 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22255 LI89_22260 LI89_22260 LI89_22260 61461 61898 + PTS mannose transporter subunit IIA gene gene4290 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22260 LI89_22265 LI89_22265 LI89_22265 61978 63012 + glycosyl hydrolase family 88 gene gene4291 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22265 LI89_22270 LI89_22270 LI89_22270 63037 64503 + hypothetical protein gene gene4292 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22270 LI89_22275 LI89_22275 LI89_22275 64548 65552 + hypothetical protein gene gene4293 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22275 LI89_22280 LI89_22280 LI89_22280 65613 67970 + sugar lyase gene gene4294 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22280 LI89_22285 LI89_22285 LI89_22285 67980 70667 + serine protease EspC precursor gene gene4295 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22285 LI89_22290 LI89_22290 LI89_22290 70703 70846 + lipoprotein gene gene4296 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22290 LI89_22295 LI89_22295 LI89_22295 71454 72224 + resolvase gene gene4297 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22295 LI89_22300 LI89_22300 LI89_22300 72229 72483 + hypothetical protein gene gene4298 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22300 LI89_22305 LI89_22305 LI89_22305 72560 72976 - hypothetical protein gene gene4299 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22305 LI89_22310 LI89_22310 LI89_22310 72986 73414 - hypothetical protein gene gene4300 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22310 LI89_22320 LI89_22320 LI89_22320 74166 74570 + hypothetical protein gene gene4301 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22320 LI89_22325 LI89_22325 LI89_22325 74563 74838 + hypothetical protein gene gene4302 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22325 LI89_22330 LI89_22330 LI89_22330 74854 75366 + hypothetical protein gene gene4303 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22330 LI89_22345 LI89_22345 LI89_22345 82456 82785 - hypothetical protein gene gene4304 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22345 LI89_22350 LI89_22350 LI89_22350 82979 83344 - hypothetical protein gene gene4305 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22350 LI89_22355 LI89_22355 LI89_22355 83670 83924 + hypothetical protein gene gene4306 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22355 LI89_22360 LI89_22360 LI89_22360 83983 84363 - hypothetical protein gene gene4307 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22360 LI89_22365 LI89_22365 LI89_22365 84377 84655 - hypothetical protein gene gene4308 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22365 LI89_22370 LI89_22370 LI89_22370 84667 84939 - hypothetical protein gene gene4309 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22370 LI89_22375 LI89_22375 LI89_22375 85659 86468 - hypothetical protein gene gene4310 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22375 LI89_22385 LI89_22385 LI89_22385 87380 87682 - DNA-binding protein gene gene4311 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22385 LI89_22390 LI89_22390 LI89_22390 87675 88007 - hypothetical protein gene gene4312 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22390 LI89_22395 LI89_22395 LI89_22395 88170 88970 - hypothetical protein gene gene4313 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22395 LI89_22400 LI89_22400 LI89_22400 89799 90137 - hypothetical protein gene gene4314 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22400 LI89_22405 LI89_22405 LI89_22405 90299 91699 - hypothetical protein gene gene4315 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22405 LI89_22415 LI89_22415 LI89_22415 92696 93361 + hypothetical protein gene gene4316 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22415 LI89_22420 LI89_22420 LI89_22420 93549 93848 - hypothetical protein gene gene4317 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22420 LI89_22425 LI89_22425 LI89_22425 94404 95426 - transposase gene gene4318 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22425 LI89_22430 LI89_22430 LI89_22430 95806 97044 + transposase gene gene4319 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22430 LI89_22435 LI89_22435 LI89_22435 97521 98093 + hypothetical protein gene gene4320 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22435 LI89_22440 LI89_22440 LI89_22440 98293 99216 + cation transporter gene gene4321 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22440 LI89_22445 LI89_22445 LI89_22445 99473 100114 - resolvase gene gene4322 http://www.ncbi.nlm.nih.gov/gene/?term=LI89_22445