locus-tag class description XM56_00005 IPR001957 Chromosomal replication control, initiator DnaA XM56_00005 IPR003593 AAA+ ATPase domain XM56_00005 IPR020591 Chromosomal replication control, initiator DnaA-like XM56_00005 IPR010921 Trp repressor/replication initiator XM56_00005 IPR018312 Chromosomal replication control, initiator DnaA, conserved site XM56_00005 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_00005 IPR038454 DnaA, N-terminal domain superfamily XM56_00005 IPR024633 DnaA N-terminal domain XM56_00005 IPR013159 Chromosomal replication initiator, DnaA C-terminal XM56_00005 IPR013317 Chromosomal replication initiator protein DnaA XM56_00010 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal XM56_00010 IPR001001 DNA polymerase III, beta sliding clamp XM56_00010 IPR022637 DNA polymerase III, beta sliding clamp, central XM56_00010 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal XM56_00015 IPR001238 DNA-binding, RecF XM56_00015 IPR018078 DNA-binding, RecF, conserved site XM56_00015 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_00015 IPR003395 RecF/RecN/SMC, N-terminal XM56_00015 IPR042174 DNA-binding RecF, domain 2 XM56_00020 IPR001241 DNA topoisomerase, type IIA XM56_00020 IPR034160 DNA gyrase subunit B, TOPRIM domain XM56_00020 IPR018522 DNA topoisomerase, type IIA, conserved site XM56_00020 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 XM56_00020 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal XM56_00020 IPR013760 DNA topoisomerase, type IIA-like domain superfamily XM56_00020 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup XM56_00020 IPR006171 TOPRIM domain XM56_00020 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XM56_00020 IPR003594 Histidine kinase/HSP90-like ATPase XM56_00020 IPR041423 DNA gyrase subunit B insert domain XM56_00020 IPR011557 DNA gyrase, subunit B XM56_00020 IPR002288 DNA gyrase B subunit, C-terminal XM56_00020 IPR020568 Ribosomal protein S5 domain 2-type fold XM56_00025 IPR000150 Cof family XM56_00025 IPR036412 HAD-like superfamily XM56_00025 IPR006379 HAD-superfamily hydrolase, subfamily IIB XM56_00025 IPR023214 HAD superfamily XM56_00030 IPR036291 NAD(P)-binding domain superfamily XM56_00030 IPR003462 Ornithine cyclodeaminase/mu-crystallin XM56_00030 IPR023401 Ornithine cyclodeaminase, N-terminal XM56_00030 IPR014334 Ectoine utilization protein EutC XM56_00035 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site XM56_00035 IPR001926 Pyridoxal-phosphate dependent enzyme XM56_00035 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme XM56_00035 IPR005789 Threonine dehydratase, catabolic XM56_00040 IPR011659 WD40-like Beta Propeller XM56_00040 IPR022223 Protein of unknown function DUF3748 XM56_00040 IPR011042 Six-bladed beta-propeller, TolB-like XM56_00045 IPR010780 Protein of unknown function DUF1375 XM56_00050 IPR008978 HSP20-like chaperone XM56_00050 IPR037913 Small heat shock protein IbpA/IbpB, ACD domain XM56_00050 IPR023728 Small heat shock protein IbpA XM56_00050 IPR002068 Alpha crystallin/Hsp20 domain XM56_00055 IPR002068 Alpha crystallin/Hsp20 domain XM56_00055 IPR022848 Small heat shock protein IbpB XM56_00055 IPR008978 HSP20-like chaperone XM56_00055 IPR037913 Small heat shock protein IbpA/IbpB, ACD domain XM56_00060 IPR006512 YidE/YbjL duplication XM56_00060 IPR006037 Regulator of K+ conductance, C-terminal XM56_00060 IPR023018 Transport protein YidE, putative XM56_00060 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily XM56_00065 IPR004839 Aminotransferase, class I/classII XM56_00065 IPR015424 Pyridoxal phosphate-dependent transferase XM56_00065 IPR015421 Pyridoxal phosphate-dependent transferase, major domain XM56_00070 IPR014635 Alpha-amylase, MalS type XM56_00070 IPR006047 Glycosyl hydrolase, family 13, catalytic domain XM56_00070 IPR017853 Glycoside hydrolase superfamily XM56_00075 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain XM56_00075 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 XM56_00075 IPR023756 Glyoxylate/hydroxypyruvate reductase B XM56_00075 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site XM56_00075 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain XM56_00075 IPR036291 NAD(P)-binding domain superfamily XM56_00080 IPR036259 MFS transporter superfamily XM56_00080 IPR020846 Major facilitator superfamily domain XM56_00080 IPR011701 Major facilitator superfamily XM56_00105 IPR016181 Acyl-CoA N-acyltransferase XM56_00105 IPR000182 GNAT domain XM56_00110 IPR004597 DNA-3-methyladenine glycosylase I XM56_00110 IPR011257 DNA glycosylase XM56_00110 IPR005019 Methyladenine glycosylase XM56_00115 IPR002310 Glycine-tRNA ligase, alpha subunit XM56_00115 IPR006194 Glycine-tRNA synthetase, heterodimeric XM56_00120 IPR008909 DALR anticodon binding XM56_00120 IPR015944 Glycine-tRNA ligase, beta subunit XM56_00120 IPR006194 Glycine-tRNA synthetase, heterodimeric XM56_00125 IPR021413 Protein of unknown function DUF3053 XM56_00130 IPR016152 Phosphotransferase/anion transporter XM56_00130 IPR002178 PTS EIIA type-2 domain XM56_00130 IPR013011 Phosphotransferase system, EIIB component, type 2 XM56_00130 IPR003501 Phosphotransferase system, EIIB component, type 2/3 XM56_00130 IPR036095 PTS system IIB component-like superfamily XM56_00130 IPR029503 Phosphotransferase system EIIB component, mannitol-specific XM56_00130 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC XM56_00130 IPR003352 Phosphotransferase system, EIIC XM56_00130 IPR013014 Phosphotransferase system, EIIC component, type 2 XM56_00135 IPR013118 Mannitol dehydrogenase, C-terminal XM56_00135 IPR000669 Mannitol dehydrogenase XM56_00135 IPR023028 Mannitol-1-phosphate 5-dehydrogenase XM56_00135 IPR013131 Mannitol dehydrogenase, N-terminal XM56_00135 IPR023027 Mannitol dehydrogenase, conserved site XM56_00135 IPR013328 6-phosphogluconate dehydrogenase, domain 2 XM56_00135 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily XM56_00135 IPR036291 NAD(P)-binding domain superfamily XM56_00140 IPR007761 Mannitol repressor MtlR-like XM56_00140 IPR038026 MtlR-like superfamily XM56_00150 IPR000524 Transcription regulator HTH, GntR XM56_00150 IPR015424 Pyridoxal phosphate-dependent transferase XM56_00150 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 XM56_00150 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_00150 IPR036390 Winged helix DNA-binding domain superfamily XM56_00150 IPR004839 Aminotransferase, class I/classII XM56_00150 IPR015421 Pyridoxal phosphate-dependent transferase, major domain XM56_00155 IPR021230 Protein of unknown function DUF2810 XM56_00160 IPR037914 SpoVT-AbrB domain superfamily XM56_00160 IPR007159 SpoVT-AbrB domain XM56_00165 IPR029060 PIN-like domain superfamily XM56_00165 IPR002716 PIN domain XM56_00165 IPR022907 VapC family XM56_00170 IPR011037 Pyruvate kinase-like, insert domain superfamily XM56_00170 IPR005302 Molybdenum cofactor sulfurase, C-terminal XM56_00170 IPR005163 3-alpha domain XM56_00175 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily XM56_00175 IPR004090 Chemotaxis methyl-accepting receptor XM56_00175 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site XM56_00175 IPR003660 HAMP domain XM56_00175 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding XM56_00175 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain XM56_00180 IPR019831 Manganese/iron superoxide dismutase, N-terminal XM56_00180 IPR019833 Manganese/iron superoxide dismutase, binding site XM56_00180 IPR019832 Manganese/iron superoxide dismutase, C-terminal XM56_00180 IPR001189 Manganese/iron superoxide dismutase XM56_00180 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily XM56_00180 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily XM56_00185 IPR003786 Sulfur carrier protein FdhD XM56_00185 IPR016193 Cytidine deaminase-like XM56_00190 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain XM56_00190 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site XM56_00190 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site XM56_00190 IPR006656 Molybdopterin oxidoreductase XM56_00190 IPR009010 Aspartate decarboxylase-like domain superfamily XM56_00190 IPR006311 Twin-arginine translocation pathway, signal sequence XM56_00190 IPR006657 Molybdopterin dinucleotide-binding domain XM56_00190 IPR006443 Formate dehydrogenase-N, alpha subunit XM56_00195 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site XM56_00195 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site XM56_00195 IPR006311 Twin-arginine translocation pathway, signal sequence XM56_00195 IPR009010 Aspartate decarboxylase-like domain superfamily XM56_00195 IPR006443 Formate dehydrogenase-N, alpha subunit XM56_00195 IPR006657 Molybdopterin dinucleotide-binding domain XM56_00195 IPR006656 Molybdopterin oxidoreductase XM56_00195 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain XM56_00200 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site XM56_00200 IPR015246 Formate dehydrogenase, transmembrane XM56_00200 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria XM56_00200 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain XM56_00200 IPR014603 Formate dehydrogenase iron-sulphur subunit XM56_00200 IPR038384 Formate dehydrogenase, C-terminal domain superfamily XM56_00205 IPR006471 Formate dehydrogenase, gamma subunit XM56_00205 IPR016174 Di-haem cytochrome, transmembrane XM56_00205 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase XM56_00210 IPR006452 Formate dehydrogenase accessory protein XM56_00210 IPR024064 FdhE-like superfamily XM56_00215 IPR015424 Pyridoxal phosphate-dependent transferase XM56_00215 IPR015421 Pyridoxal phosphate-dependent transferase, major domain XM56_00215 IPR004534 L-seryl-tRNA(Sec) selenium transferase XM56_00215 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain XM56_00215 IPR018319 L-seryl-tRNA selenium transferase-like XM56_00220 IPR031157 Tr-type G domain, conserved site XM56_00220 IPR004535 Translation elongation factor, selenocysteine-specific XM56_00220 IPR015191 Translation elongation factor SelB, winged helix, type 3 XM56_00220 IPR015190 Translation elongation factor SelB, winged helix, type 2 XM56_00220 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_00220 IPR000795 Transcription factor, GTP-binding domain XM56_00220 IPR036390 Winged helix DNA-binding domain superfamily XM56_00220 IPR009000 Translation protein, beta-barrel domain superfamily XM56_00220 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal XM56_00220 IPR004161 Translation elongation factor EFTu-like, domain 2 XM56_00220 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_00225 IPR036259 MFS transporter superfamily XM56_00225 IPR020846 Major facilitator superfamily domain XM56_00225 IPR011701 Major facilitator superfamily XM56_00230 IPR002656 Acyltransferase 3 XM56_00230 IPR032905 O-acetyltransferase WecH XM56_00245 IPR016147 Pili assembly chaperone, N-terminal XM56_00245 IPR008962 PapD-like superfamily XM56_00245 IPR036316 Pili assembly chaperone, C-terminal domain superfamily XM56_00245 IPR001829 Pili assembly chaperone, bacterial XM56_00245 IPR016148 Pili assembly chaperone, C-terminal XM56_00245 IPR018046 Pili assembly chaperone, conserved site XM56_00245 IPR013783 Immunoglobulin-like fold XM56_00250 IPR000577 Carbohydrate kinase, FGGY XM56_00250 IPR018485 Carbohydrate kinase, FGGY, C-terminal XM56_00250 IPR018484 Carbohydrate kinase, FGGY, N-terminal XM56_00250 IPR006000 Xylulokinase XM56_00250 IPR018483 Carbohydrate kinase, FGGY, conserved site XM56_00255 IPR001998 Xylose isomerase XM56_00255 IPR036237 Xylose isomerase-like superfamily XM56_00255 IPR013452 Xylose isomerase, bacterial-type XM56_00260 IPR028082 Periplasmic binding protein-like I XM56_00260 IPR025997 Periplasmic binding protein XM56_00260 IPR013456 D-xylose ABC transporter, substrate-binding protein XM56_00265 IPR003593 AAA+ ATPase domain XM56_00265 IPR003439 ABC transporter-like XM56_00265 IPR017871 ABC transporter, conserved site XM56_00265 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_00265 IPR013455 ABC transporter, D-xylose, ATP-binding protein XM56_00270 IPR001851 ABC transporter, permease XM56_00275 IPR020449 Transcription regulator HTH, AraC- type XM56_00275 IPR028082 Periplasmic binding protein-like I XM56_00275 IPR018062 HTH domain AraC-type, conserved site XM56_00275 IPR018060 DNA binding HTH domain, AraC-type XM56_00275 IPR009057 Homeobox-like domain superfamily XM56_00280 IPR025166 Integrase, DNA-binding domain XM56_00280 IPR010998 Integrase/recombinase, N-terminal XM56_00280 IPR004107 Integrase, SAM-like, N-terminal XM56_00280 IPR038488 Integrase, DNA-binding domain superfamily XM56_00280 IPR013762 Integrase-like, catalytic domain superfamily XM56_00280 IPR011010 DNA breaking-rejoining enzyme, catalytic core XM56_00280 IPR002104 Integrase, catalytic domain XM56_00300 IPR001584 Integrase, catalytic core XM56_00300 IPR017894 HTH domain, IS21 transposase-type XM56_00305 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_00305 IPR002611 IstB-like ATP-binding protein XM56_00305 IPR001270 ClpA/B family XM56_00305 IPR003593 AAA+ ATPase domain XM56_00305 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein XM56_00310 IPR004841 Amino acid permease/ SLC12A domain XM56_00310 IPR004840 Amino acid permease, conserved site XM56_00315 IPR008948 L-Aspartase-like XM56_00315 IPR001106 Aromatic amino acid lyase XM56_00315 IPR022313 Phenylalanine/histidine ammonia-lyases, active site XM56_00315 IPR024083 Fumarase/histidase, N-terminal XM56_00315 IPR005921 Histidine ammonia-lyase XM56_00320 IPR035401 Urocanase, C-terminal domain XM56_00320 IPR035085 Urocanase, Rossmann-like domain XM56_00320 IPR036190 Urocanase superfamily XM56_00320 IPR038364 Urocanase, central domain superfamily XM56_00320 IPR023637 Urocanase XM56_00320 IPR023636 Urocanase conserved site XM56_00320 IPR035400 Urocanase, N-terminal domain XM56_00330 IPR000015 Outer membrane usher protein XM56_00330 IPR018030 Fimbrial membrane usher, conserved site XM56_00330 IPR037224 PapC, N-terminal domain superfamily XM56_00330 IPR025885 PapC, N-terminal domain XM56_00330 IPR025949 PapC-like, C-terminal domain XM56_00330 IPR042186 Outer membrane usher protein FimD, plug domain XM56_00335 IPR014710 RmlC-like jelly roll fold XM56_00335 IPR018050 Phosphomannose isomerase, type I, conserved site XM56_00335 IPR016305 Mannose-6-phosphate isomerase XM56_00335 IPR001250 Mannose-6-phosphate isomerase, type I XM56_00335 IPR011051 RmlC-like cupin domain superfamily XM56_00340 IPR001360 Glycoside hydrolase family 1 XM56_00340 IPR018120 Glycoside hydrolase family 1, active site XM56_00340 IPR017853 Glycoside hydrolase superfamily XM56_00355 IPR004501 Phosphotransferase system, EIIC component, type 3 XM56_00355 IPR004796 Phosphotransferase system, cellobiose-type IIC component XM56_00355 IPR003352 Phosphotransferase system, EIIC XM56_00360 IPR036095 PTS system IIB component-like superfamily XM56_00360 IPR003501 Phosphotransferase system, EIIB component, type 2/3 XM56_00360 IPR013012 Phosphotransferase system, EIIB component, type 3 XM56_00365 IPR004501 Phosphotransferase system, EIIC component, type 3 XM56_00365 IPR003352 Phosphotransferase system, EIIC XM56_00365 IPR004796 Phosphotransferase system, cellobiose-type IIC component XM56_00370 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit XM56_00370 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily XM56_00375 IPR000600 ROK family XM56_00380 IPR000843 LacI-type HTH domain XM56_00380 IPR010982 Lambda repressor-like, DNA-binding domain superfamily XM56_00380 IPR028082 Periplasmic binding protein-like I XM56_00400 IPR009610 CbtA toxin of type IV toxin-antitoxin system XM56_00405 IPR001207 Transposase, mutator type XM56_00410 IPR022742 Serine aminopeptidase, S33 XM56_00410 IPR029058 Alpha/Beta hydrolase fold XM56_00410 IPR012354 Esterase/lipase XM56_00415 IPR024973 ESPR domain XM56_00415 IPR011050 Pectin lyase fold/virulence factor XM56_00415 IPR012334 Pectin lyase fold XM56_00415 IPR008638 Filamentous haemagglutinin, N-terminal XM56_00415 IPR025157 Hemagglutinin repeat XM56_00415 IPR006914 VENN motif-containing domain XM56_00415 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XM56_00420 IPR027282 Two partner secretion pathway transporter XM56_00420 IPR035251 ShlB, POTRA domain XM56_00420 IPR034746 POTRA domain XM56_00420 IPR013686 Polypeptide-transport-associated, ShlB-type XM56_00420 IPR005565 Haemolysin activator HlyB, C-terminal XM56_00425 IPR025157 Hemagglutinin repeat XM56_00425 IPR012334 Pectin lyase fold XM56_00425 IPR006914 VENN motif-containing domain XM56_00425 IPR029501 Bacterial EndoU nuclease XM56_00425 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XM56_00425 IPR008619 Filamentous haemagglutinin repeat XM56_00425 IPR011050 Pectin lyase fold/virulence factor XM56_00425 IPR008638 Filamentous haemagglutinin, N-terminal XM56_00440 IPR020846 Major facilitator superfamily domain XM56_00440 IPR036259 MFS transporter superfamily XM56_00440 IPR000849 Sugar phosphate transporter XM56_00440 IPR011701 Major facilitator superfamily XM56_00440 IPR021159 Glycerate/sugar phosphate transporter, conserved site XM56_00445 IPR005467 Histidine kinase domain XM56_00445 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain XM56_00445 IPR007895 MASE1 XM56_00445 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XM56_00445 IPR003594 Histidine kinase/HSP90-like ATPase XM56_00450 IPR000792 Transcription regulator LuxR, C-terminal XM56_00450 IPR001789 Signal transduction response regulator, receiver domain XM56_00450 IPR011006 CheY-like superfamily XM56_00450 IPR016032 Signal transduction response regulator, C-terminal effector XM56_00455 IPR040423 Phosphoethanolamine transferase XM56_00455 IPR000917 Sulfatase, N-terminal XM56_00455 IPR017850 Alkaline-phosphatase-like, core domain superfamily XM56_00455 IPR012549 Phosphoethanolamine transferase, N-terminal XM56_00460 IPR019953 Organic hydroperoxide resistance protein famiy XM56_00460 IPR003718 OsmC/Ohr family XM56_00460 IPR036102 OsmC/Ohr superfamily XM56_00460 IPR015946 K homology domain-like, alpha/beta XM56_00470 IPR000914 Solute-binding protein family 5 domain XM56_00470 IPR023765 Solute-binding protein family 5, conserved site XM56_00470 IPR039424 Solute-binding protein family 5 XM56_00470 IPR030678 Peptide/nickel binding protein, MppA-type XM56_00475 IPR000515 ABC transporter type 1, transmembrane domain MetI-like XM56_00475 IPR035906 MetI-like superfamily XM56_00480 IPR025966 Oligopeptide transport permease C-like, N-terminal domain XM56_00480 IPR035906 MetI-like superfamily XM56_00480 IPR000515 ABC transporter type 1, transmembrane domain MetI-like XM56_00485 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_00485 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal XM56_00485 IPR017871 ABC transporter, conserved site XM56_00485 IPR003439 ABC transporter-like XM56_00485 IPR003593 AAA+ ATPase domain XM56_00490 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_00490 IPR003439 ABC transporter-like XM56_00490 IPR003593 AAA+ ATPase domain XM56_00490 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal XM56_00490 IPR017871 ABC transporter, conserved site XM56_00495 IPR017850 Alkaline-phosphatase-like, core domain superfamily XM56_00495 IPR017744 Cellulose biosynthesis protein BcsG XM56_00500 IPR019995 Cellulose biosynthesis, BcsF/YhjT XM56_00505 IPR017745 Cellulose biosynthesis protein BcsE XM56_00515 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_00515 IPR017746 Cellulose synthase operon protein BcsQ XM56_00520 IPR003919 Cellulose synthase, subunit A XM56_00520 IPR009875 PilZ domain XM56_00520 IPR005150 Cellulose synthase XM56_00520 IPR001173 Glycosyltransferase 2-like XM56_00520 IPR029044 Nucleotide-diphospho-sugar transferases XM56_00525 IPR008979 Galactose-binding-like domain superfamily XM56_00525 IPR018513 Cellulose synthase BcsB, bacterial XM56_00525 IPR003920 Cellulose synthase, subunit B XM56_00530 IPR019834 Glycoside hydrolase, family 8, conserved site XM56_00530 IPR002037 Glycoside hydrolase, family 8 XM56_00530 IPR012341 Six-hairpin glycosidase-like superfamily XM56_00530 IPR008928 Six-hairpin glycosidase superfamily XM56_00545 IPR033419 Gammaproteobacterial periplasmic sensor domain GAPES3 XM56_00545 IPR000160 GGDEF domain XM56_00545 IPR003660 HAMP domain XM56_00545 IPR029787 Nucleotide cyclase XM56_00545 IPR001633 EAL domain XM56_00545 IPR035919 EAL domain superfamily XM56_00550 IPR009331 Oligogalacturonate-specific porin XM56_00555 IPR010702 Periplasmic pectate lyase XM56_00565 IPR036458 Sodium:dicarboxylate symporter superfamily XM56_00565 IPR023954 C4-dicarboxylate transport protein XM56_00565 IPR001991 Sodium:dicarboxylate symporter XM56_00565 IPR018107 Sodium:dicarboxylate symporter, conserved site XM56_00570 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like XM56_00570 IPR011765 Peptidase M16, N-terminal XM56_00570 IPR007863 Peptidase M16, C-terminal XM56_00575 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site XM56_00575 IPR029056 Ribokinase-like XM56_00575 IPR011611 Carbohydrate kinase PfkB XM56_00580 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type XM56_00580 IPR014347 Tautomerase/MIF superfamily XM56_00580 IPR004370 4-oxalocrotonate tautomerase XM56_00585 IPR035919 EAL domain superfamily XM56_00585 IPR001633 EAL domain XM56_00590 IPR007844 AsmA XM56_00595 IPR036265 HIT-like superfamily XM56_00595 IPR038433 CDP-diacylglycerol pyrophosphatase superfamily XM56_00595 IPR003763 CDP-diacylglycerol pyrophosphatase XM56_00600 IPR017039 Virulence factor BrkB XM56_00600 IPR005274 Inner membrane protein YhjD XM56_00605 IPR036709 Autotransporter beta-domain superfamily XM56_00605 IPR006315 Outer membrane autotransporter barrel XM56_00605 IPR005546 Autotransporter beta-domain XM56_00605 IPR012332 P22 tailspike-like, C-terminal domain superfamily XM56_00605 IPR011050 Pectin lyase fold/virulence factor XM56_00610 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily XM56_00610 IPR006322 Glutathione reductase, eukaryote/bacterial XM56_00610 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain XM56_00610 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site XM56_00610 IPR036188 FAD/NAD(P)-binding domain superfamily XM56_00610 IPR023753 FAD/NAD(P)-binding domain XM56_00610 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I XM56_00615 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XM56_00615 IPR002052 DNA methylase, N-6 adenine-specific, conserved site XM56_00615 IPR007473 Ribosomal RNA large subunit methyltransferase J XM56_00620 IPR001567 Peptidase M3A/M3B catalytic domain XM56_00620 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 XM56_00625 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XM56_00625 IPR007536 Ribosomal RNA small subunit methyltransferase J XM56_00630 IPR016294 Peptidase M10B XM56_00630 IPR018511 Hemolysin-type calcium-binding conserved site XM56_00630 IPR001343 RTX calcium-binding nonapeptide repeat XM56_00630 IPR024079 Metallopeptidase, catalytic domain superfamily XM56_00630 IPR001818 Peptidase M10, metallopeptidase XM56_00630 IPR013858 Peptidase M10 serralysin, C-terminal XM56_00630 IPR011049 Serralysin-like metalloprotease, C-terminal XM56_00630 IPR034033 Serralysin-like metallopeptidase domain XM56_00630 IPR006026 Peptidase, metallopeptidase XM56_00635 IPR033922 NAD(P) binding domain of glutamate dehydrogenase XM56_00635 IPR014362 Glutamate dehydrogenase XM56_00635 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain XM56_00635 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal XM56_00635 IPR036291 NAD(P)-binding domain superfamily XM56_00635 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase XM56_00635 IPR033524 Leu/Phe/Val dehydrogenases active site XM56_00640 IPR006016 UspA XM56_00640 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XM56_00640 IPR006015 Universal stress protein A family XM56_00645 IPR019598 Universal stress protein B XM56_00650 IPR001204 Phosphate transporter XM56_00655 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like XM56_00655 IPR036188 FAD/NAD(P)-binding domain superfamily XM56_00655 IPR023166 HI0933-like insert domain superfamily XM56_00660 IPR018107 Sodium:dicarboxylate symporter, conserved site XM56_00660 IPR023954 C4-dicarboxylate transport protein XM56_00660 IPR001991 Sodium:dicarboxylate symporter XM56_00660 IPR036458 Sodium:dicarboxylate symporter superfamily XM56_00675 IPR036849 Enolase-like, C-terminal domain superfamily XM56_00675 IPR022665 Methylaspartate ammonia-lyase, N-terminal XM56_00675 IPR006395 Methylaspartate ammonia-lyase XM56_00675 IPR029017 Enolase-like, N-terminal XM56_00675 IPR022662 Methylaspartate ammonia-lyase, C-terminal XM56_00680 IPR006396 Glutamate mutase epsilon subunit XM56_00680 IPR014714 Glutamate mutase E subunit, C-terminal domain superfamily XM56_00680 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic XM56_00685 IPR006230 Protein MutL XM56_00690 IPR006158 Cobalamin (vitamin B12)-binding domain XM56_00690 IPR036724 Cobalamin-binding domain superfamily XM56_00690 IPR006394 Glutamate mutase sigma subunit XM56_00695 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup XM56_00695 IPR006204 GHMP kinase N-terminal domain XM56_00695 IPR012363 Propanediol utilisation/coumermycin biosynthesis, PduX-related XM56_00695 IPR020568 Ribosomal protein S5 domain 2-type fold XM56_00700 IPR006367 Sirohaem synthase, N-terminal XM56_00700 IPR019478 Sirohaem synthase, dimerisation domain XM56_00700 IPR014776 Tetrapyrrole methylase, subdomain 2 XM56_00700 IPR012409 Sirohaem synthase XM56_00700 IPR037115 Sirohaem synthase, dimerisation domain superfamily XM56_00700 IPR036291 NAD(P)-binding domain superfamily XM56_00700 IPR006366 Uroporphyrin-III C-methyltransferase XM56_00700 IPR014777 Tetrapyrrole methylase, subdomain 1 XM56_00700 IPR035996 Tetrapyrrole methylase superfamily XM56_00700 IPR000878 Tetrapyrrole methylase XM56_00700 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site XM56_00700 IPR028281 Siroheme synthase, central domain XM56_00705 IPR000847 Transcription regulator HTH, LysR XM56_00705 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_00705 IPR005119 LysR, substrate-binding XM56_00705 IPR036390 Winged helix DNA-binding domain superfamily XM56_00710 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily XM56_00710 IPR020557 Fumarate lyase, conserved site XM56_00710 IPR011167 Iron-dependent fumarate hydratase XM56_00710 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain XM56_00710 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain XM56_00715 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_00715 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR XM56_00720 IPR006379 HAD-superfamily hydrolase, subfamily IIB XM56_00720 IPR023214 HAD superfamily XM56_00720 IPR000150 Cof family XM56_00720 IPR036412 HAD-like superfamily XM56_00730 IPR000847 Transcription regulator HTH, LysR XM56_00730 IPR036390 Winged helix DNA-binding domain superfamily XM56_00730 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_00730 IPR005119 LysR, substrate-binding XM56_00735 IPR036259 MFS transporter superfamily XM56_00735 IPR011701 Major facilitator superfamily XM56_00735 IPR020846 Major facilitator superfamily domain XM56_00740 IPR010061 Methylmalonate-semialdehyde dehydrogenase XM56_00740 IPR015590 Aldehyde dehydrogenase domain XM56_00740 IPR016162 Aldehyde dehydrogenase, N-terminal XM56_00740 IPR016160 Aldehyde dehydrogenase, cysteine active site XM56_00740 IPR016163 Aldehyde dehydrogenase, C-terminal XM56_00740 IPR016161 Aldehyde/histidinol dehydrogenase XM56_00745 IPR021120 KduI/IolB isomerase XM56_00745 IPR014710 RmlC-like jelly roll fold XM56_00745 IPR011051 RmlC-like cupin domain superfamily XM56_00745 IPR024203 5-deoxy-glucuronate isomerase, IolB XM56_00745 IPR023770 5-deoxy-glucuronate isomerase, Bacilli XM56_00755 IPR011611 Carbohydrate kinase PfkB XM56_00755 IPR023314 5-Dehydro-2-deoxygluconokinase-like superfamily XM56_00755 IPR030830 5-Dehydro-2-deoxygluconokinase XM56_00755 IPR022841 5-dehydro-2-deoxygluconokinase, Firmicutes XM56_00755 IPR029056 Ribokinase-like XM56_00755 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site XM56_00760 IPR012000 Thiamine pyrophosphate enzyme, central domain XM56_00760 IPR029061 Thiamin diphosphate-binding fold XM56_00760 IPR023757 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase, Firmicutes XM56_00760 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding XM56_00760 IPR000399 TPP-binding enzyme, conserved site XM56_00760 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain XM56_00760 IPR030817 3,5/4-Trihydroxycyclohexa-1,2-dione hydrolase XM56_00760 IPR029035 DHS-like NAD/FAD-binding domain superfamily XM56_00765 IPR000683 Oxidoreductase, N-terminal XM56_00765 IPR036291 NAD(P)-binding domain superfamily XM56_00765 IPR023794 Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase XM56_00765 IPR004104 Oxidoreductase, C-terminal XM56_00770 IPR013022 Xylose isomerase-like, TIM barrel domain XM56_00770 IPR023952 Inosose dehydratase XM56_00770 IPR030823 IolE/MocC family XM56_00770 IPR036237 Xylose isomerase-like superfamily XM56_00775 IPR016181 Acyl-CoA N-acyltransferase XM56_00775 IPR000182 GNAT domain XM56_00780 IPR011051 RmlC-like cupin domain superfamily XM56_00780 IPR014710 RmlC-like jelly roll fold XM56_00780 IPR012093 Pirin XM56_00780 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain XM56_00780 IPR003829 Pirin, N-terminal domain XM56_00785 IPR028082 Periplasmic binding protein-like I XM56_00785 IPR010982 Lambda repressor-like, DNA-binding domain superfamily XM56_00785 IPR000843 LacI-type HTH domain XM56_00785 IPR001761 Periplasmic binding protein/LacI sugar binding domain XM56_00790 IPR003474 Gluconate transporter XM56_00795 IPR006001 Carbohydrate kinase, thermoresistant glucokinase XM56_00795 IPR031322 Shikimate kinase/gluconokinase XM56_00795 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_00800 IPR002771 Multiple antibiotic resistance (MarC)-related XM56_00805 IPR012080 Aspartate-semialdehyde dehydrogenase XM56_00805 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type XM56_00805 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site XM56_00805 IPR036291 NAD(P)-binding domain superfamily XM56_00805 IPR000534 Semialdehyde dehydrogenase, NAD-binding XM56_00805 IPR012280 Semialdehyde dehydrogenase, dimerisation domain XM56_00810 IPR012782 Acetolactate synthase, catabolic XM56_00810 IPR029035 DHS-like NAD/FAD-binding domain superfamily XM56_00810 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain XM56_00810 IPR012000 Thiamine pyrophosphate enzyme, central domain XM56_00810 IPR029061 Thiamin diphosphate-binding fold XM56_00810 IPR000399 TPP-binding enzyme, conserved site XM56_00810 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding XM56_00815 IPR005128 Alpha-acetolactate decarboxylase XM56_00820 IPR005119 LysR, substrate-binding XM56_00820 IPR000847 Transcription regulator HTH, LysR XM56_00820 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_00820 IPR037410 HTH-type transcriptional regulator BudR, PBP2 domain XM56_00820 IPR036390 Winged helix DNA-binding domain superfamily XM56_00825 IPR003018 GAF domain XM56_00825 IPR010559 Signal transduction histidine kinase, internal region XM56_00825 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region XM56_00825 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XM56_00830 IPR004193 Glycoside hydrolase, family 13, N-terminal XM56_00830 IPR013780 Glycosyl hydrolase, all-beta XM56_00830 IPR017853 Glycoside hydrolase superfamily XM56_00830 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB XM56_00830 IPR013783 Immunoglobulin-like fold XM56_00830 IPR014756 Immunoglobulin E-set XM56_00830 IPR037439 1,4-alpha-glucan-branching enzyme XM56_00830 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta XM56_00830 IPR006047 Glycosyl hydrolase, family 13, catalytic domain XM56_00835 IPR014756 Immunoglobulin E-set XM56_00835 IPR013783 Immunoglobulin-like fold XM56_00835 IPR011837 Glycogen debranching enzyme, GlgX type XM56_00835 IPR017853 Glycoside hydrolase superfamily XM56_00835 IPR013780 Glycosyl hydrolase, all-beta XM56_00835 IPR004193 Glycoside hydrolase, family 13, N-terminal XM56_00835 IPR006047 Glycosyl hydrolase, family 13, catalytic domain XM56_00835 IPR022844 Glycogen debranching enzyme, bacterial XM56_00835 IPR040784 Glycogen debranching enzyme, C-terminal domain XM56_00840 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial XM56_00840 IPR005835 Nucleotidyl transferase domain XM56_00840 IPR029044 Nucleotide-diphospho-sugar transferases XM56_00840 IPR011004 Trimeric LpxA-like superfamily XM56_00840 IPR011831 Glucose-1-phosphate adenylyltransferase XM56_00840 IPR005836 ADP-glucose pyrophosphorylase, conserved site XM56_00845 IPR013534 Starch synthase, catalytic domain XM56_00845 IPR001296 Glycosyl transferase, family 1 XM56_00845 IPR011835 Bacterial/plant glycogen synthase XM56_00850 IPR035090 Phosphorylase pyridoxal-phosphate attachment site XM56_00850 IPR011833 Glycogen/starch/alpha-glucan phosphorylase XM56_00850 IPR000811 Glycosyl transferase, family 35 XM56_00855 IPR006076 FAD dependent oxidoreductase XM56_00855 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase XM56_00855 IPR036188 FAD/NAD(P)-binding domain superfamily XM56_00855 IPR031656 Alpha-glycerophosphate oxidase, C-terminal XM56_00855 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily XM56_00865 IPR018356 Transcription regulator, HTH DeoR-type, conserved site XM56_00865 IPR037171 NagB/RpiA transferase-like XM56_00865 IPR001034 DeoR-type HTH domain XM56_00865 IPR036390 Winged helix DNA-binding domain superfamily XM56_00865 IPR014036 DeoR C-terminal sensor domain XM56_00865 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_00870 IPR022764 Peptidase S54, rhomboid domain XM56_00870 IPR035952 Rhomboid-like superfamily XM56_00870 IPR023662 Rhomboid protease GlpG XM56_00870 IPR038236 GlpG peptidase, N-terminal domain superfamily XM56_00870 IPR022732 Peptidase S54, GlpG peptidase, N-terminal XM56_00875 IPR036873 Rhodanese-like domain superfamily XM56_00875 IPR023695 Thiosulfate sulfurtransferase, bacterial XM56_00875 IPR001763 Rhodanese-like domain XM56_00885 IPR016032 Signal transduction response regulator, C-terminal effector XM56_00885 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_00885 IPR011990 Tetratricopeptide-like helical domain superfamily XM56_00885 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_00885 IPR000792 Transcription regulator LuxR, C-terminal XM56_00885 IPR041617 MalT-like TPR region XM56_00885 IPR023768 Transcriptional regulator HTH-type, MalT XM56_00890 IPR035090 Phosphorylase pyridoxal-phosphate attachment site XM56_00890 IPR011833 Glycogen/starch/alpha-glucan phosphorylase XM56_00890 IPR000811 Glycosyl transferase, family 35 XM56_00895 IPR003385 Glycoside hydrolase, family 77 XM56_00895 IPR017853 Glycoside hydrolase superfamily XM56_00905 IPR035903 HesB-like domain superfamily XM56_00905 IPR034904 Fe-S cluster assembly domain superfamily XM56_00905 IPR000361 FeS cluster biogenesis XM56_00905 IPR017726 Fe/S biogenesis protein NfuA XM56_00905 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal XM56_00910 IPR029057 Phosphoribosyltransferase-like XM56_00910 IPR000836 Phosphoribosyltransferase domain XM56_00910 IPR005222 Competence protein ComF XM56_00915 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase XM56_00915 IPR029058 Alpha/Beta hydrolase fold XM56_00915 IPR000073 Alpha/beta hydrolase fold-1 XM56_00920 IPR036275 YdgH-like superfamily XM56_00920 IPR010854 Domain of unknown function DUF1471 XM56_00920 IPR025543 Dodecin-like XM56_00925 IPR015102 Transcriptional regulator HTH-type, FeoC XM56_00925 IPR036390 Winged helix DNA-binding domain superfamily XM56_00925 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_00925 IPR023732 Probable [Fe-S]-dependent transcriptional repressor XM56_00930 IPR003373 Ferrous iron transport protein B XM56_00930 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_00930 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain XM56_00930 IPR030389 FeoB-type guanine nucleotide-binding (G) domain XM56_00930 IPR011640 Ferrous iron transport protein B, C-terminal XM56_00930 IPR041069 FeoB, cytosolic helical domain XM56_00935 IPR008988 Transcriptional repressor, C-terminal XM56_00935 IPR038157 Ferrous iron transporter, core domain XM56_00935 IPR007167 Ferrous iron transporter FeoA domain XM56_00940 IPR022967 RNA-binding domain, S1 XM56_00940 IPR023323 Tex-like domain superfamily XM56_00940 IPR023319 Tex-like protein, HTH domain superfamily XM56_00940 IPR018974 Tex-like protein, N-terminal XM56_00940 IPR012337 Ribonuclease H-like superfamily XM56_00940 IPR012340 Nucleic acid-binding, OB-fold XM56_00940 IPR032639 Tex protein, YqgF-like domain XM56_00940 IPR003029 S1 domain XM56_00940 IPR006641 YqgF/RNase H-like domain XM56_00940 IPR037027 YqgF/RNase H-like domain superfamily XM56_00940 IPR041692 HHH domain 9 XM56_00940 IPR010994 RuvA domain 2-like XM56_00965 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily XM56_00965 IPR018151 Transcription elongation factor, GreA/GreB, conserved site XM56_00965 IPR028624 Transcription elongation factor GreA/GreB XM56_00965 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal XM56_00965 IPR023459 Transcription elongation factor GreA/GreB family XM56_00965 IPR006358 Transcription elongation factor GreB XM56_00965 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily XM56_00965 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal XM56_00970 IPR011006 CheY-like superfamily XM56_00970 IPR001867 OmpR/PhoB-type DNA-binding domain XM56_00970 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_00970 IPR039420 Transcriptional regulatory protein WalR-like XM56_00970 IPR001789 Signal transduction response regulator, receiver domain XM56_00970 IPR016032 Signal transduction response regulator, C-terminal effector XM56_00975 IPR005467 Histidine kinase domain XM56_00975 IPR004358 Signal transduction histidine kinase-related protein, C-terminal XM56_00975 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain XM56_00975 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XM56_00975 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily XM56_00975 IPR003660 HAMP domain XM56_00975 IPR003594 Histidine kinase/HSP90-like ATPase XM56_00985 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising XM56_00985 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal XM56_00985 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal XM56_00985 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site XM56_00990 IPR000397 Heat shock protein Hsp33 XM56_00990 IPR016154 Heat shock protein Hsp33, C-terminal XM56_00990 IPR016153 Heat shock protein Hsp33, N-terminal XM56_00990 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily XM56_00995 IPR025708 Heat shock protein 15 XM56_00995 IPR036986 RNA-binding S4 domain superfamily XM56_00995 IPR002942 RNA-binding S4 domain XM56_01000 IPR041492 Haloacid dehalogenase-like hydrolase XM56_01000 IPR023214 HAD superfamily XM56_01000 IPR006439 HAD hydrolase, subfamily IA XM56_01000 IPR036412 HAD-like superfamily XM56_01005 IPR010771 Intracellular growth attenuator IgaA XM56_01010 IPR000086 NUDIX hydrolase domain XM56_01010 IPR020084 NUDIX hydrolase, conserved site XM56_01010 IPR015797 NUDIX hydrolase-like domain superfamily XM56_01015 IPR031376 Penicillin-binding protein, OB-like domain XM56_01015 IPR023346 Lysozyme-like domain superfamily XM56_01015 IPR001264 Glycosyl transferase, family 51 XM56_01015 IPR012338 Beta-lactamase/transpeptidase-like XM56_01015 IPR036950 Penicillin binding protein transglycosylase domain XM56_01015 IPR001460 Penicillin-binding protein, transpeptidase XM56_01040 IPR011662 Secretin/TonB, short N-terminal domain XM56_01040 IPR001775 GspD/PilQ family XM56_01040 IPR013355 Type IV pilus secretin PilQ XM56_01040 IPR004845 Type II secretion system GspD, conserved site XM56_01040 IPR004846 Type II/III secretion system XM56_01040 IPR038591 NolW-like superfamily XM56_01040 IPR005644 NolW-like XM56_01045 IPR000623 Shikimate kinase/Threonine synthase-like 1 XM56_01045 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_01045 IPR023000 Shikimate kinase, conserved site XM56_01045 IPR031322 Shikimate kinase/gluconokinase XM56_01050 IPR030963 3-dehydroquinate synthase family XM56_01050 IPR030960 3-dehydroquinate synthase domain XM56_01050 IPR016037 3-dehydroquinate synthase AroB XM56_01055 IPR007730 Sporulation-like domain XM56_01055 IPR036680 Sporulation-like domain superfamily XM56_01060 IPR012263 Adenine modification methylase, M.EcoRV-type XM56_01060 IPR002052 DNA methylase, N-6 adenine-specific, conserved site XM56_01060 IPR023095 Adenine-specific methyltransferase, domain 2 XM56_01060 IPR012327 D12 class N6 adenine-specific DNA methyltransferase XM56_01060 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XM56_01065 IPR013785 Aldolase-type TIM barrel XM56_01065 IPR026019 Ribulose-phosphate 3-epimerase XM56_01065 IPR000056 Ribulose-phosphate 3-epimerase-like XM56_01065 IPR011060 Ribulose-phosphate binding barrel XM56_01070 IPR006439 HAD hydrolase, subfamily IA XM56_01070 IPR023214 HAD superfamily XM56_01070 IPR023198 Phosphoglycolate phosphatase-like, domain 2 XM56_01070 IPR036412 HAD-like superfamily XM56_01070 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic XM56_01070 IPR041492 Haloacid dehalogenase-like hydrolase XM56_01070 IPR037512 Phosphoglycolate phosphatase, prokaryotic XM56_01075 IPR002306 Tryptophan-tRNA ligase XM56_01075 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site XM56_01075 IPR002305 Aminoacyl-tRNA synthetase, class Ic XM56_01075 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XM56_01075 IPR024109 Tryptophan-tRNA ligase, bacterial-type XM56_01080 IPR012409 Sirohaem synthase XM56_01080 IPR037115 Sirohaem synthase, dimerisation domain superfamily XM56_01080 IPR028281 Siroheme synthase, central domain XM56_01080 IPR019478 Sirohaem synthase, dimerisation domain XM56_01080 IPR006367 Sirohaem synthase, N-terminal XM56_01080 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site XM56_01080 IPR014777 Tetrapyrrole methylase, subdomain 1 XM56_01080 IPR036291 NAD(P)-binding domain superfamily XM56_01080 IPR006366 Uroporphyrin-III C-methyltransferase XM56_01080 IPR014776 Tetrapyrrole methylase, subdomain 2 XM56_01080 IPR035996 Tetrapyrrole methylase superfamily XM56_01080 IPR000878 Tetrapyrrole methylase XM56_01085 IPR023271 Aquaporin-like XM56_01085 IPR000292 Formate/nitrite transporter XM56_01085 IPR024002 Formate/nitrite transporter, conserved site XM56_01090 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily XM56_01090 IPR017881 Nitrite reductase (NADH) small subunit XM56_01090 IPR012748 Rieske-like [2Fe-2S] domain, NirD-type XM56_01095 IPR017121 Nitrite reductase [NAD(P)H], large subunit XM56_01095 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal XM56_01095 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site XM56_01095 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB XM56_01095 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain XM56_01095 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily XM56_01095 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily XM56_01095 IPR023753 FAD/NAD(P)-binding domain XM56_01095 IPR036188 FAD/NAD(P)-binding domain superfamily XM56_01095 IPR007419 BFD-like [2Fe-2S]-binding domain XM56_01095 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain XM56_01100 IPR013108 Amidohydrolase 3 XM56_01100 IPR032466 Metal-dependent hydrolase XM56_01100 IPR011059 Metal-dependent hydrolase, composite domain superfamily XM56_01105 IPR023528 Major facilitator superfamily transporter, TsgA XM56_01105 IPR036259 MFS transporter superfamily XM56_01105 IPR011701 Major facilitator superfamily XM56_01105 IPR020846 Major facilitator superfamily domain XM56_01110 IPR000843 LacI-type HTH domain XM56_01110 IPR010982 Lambda repressor-like, DNA-binding domain superfamily XM56_01110 IPR028082 Periplasmic binding protein-like I XM56_01115 IPR019802 Glycoside hydrolase, family 4, conserved site XM56_01115 IPR001088 Glycoside hydrolase, family 4 XM56_01115 IPR022616 Glycosyl hydrolase, family 4, C-terminal XM56_01115 IPR036291 NAD(P)-binding domain superfamily XM56_01115 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal XM56_01120 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain XM56_01120 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site XM56_01120 IPR029000 Cyclophilin-like domain superfamily XM56_01125 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_01125 IPR033186 Helicase HerA-like C-terminal XM56_01130 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain XM56_01130 IPR029062 Class I glutamine amidotransferase-like XM56_01130 IPR017926 Glutamine amidotransferase XM56_01135 IPR015421 Pyridoxal phosphate-dependent transferase, major domain XM56_01135 IPR005814 Aminotransferase class-III XM56_01135 IPR015424 Pyridoxal phosphate-dependent transferase XM56_01135 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria XM56_01135 IPR004636 Acetylornithine/Succinylornithine transaminase family XM56_01135 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 XM56_01140 IPR010020 Integral membrane protein, YccS/YhfK XM56_01140 IPR032692 Integral membrane protein YccS, N-terminal XM56_01145 IPR036390 Winged helix DNA-binding domain superfamily XM56_01145 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_01145 IPR018335 Transcription regulator HTH, Crp-type, conserved site XM56_01145 IPR014710 RmlC-like jelly roll fold XM56_01145 IPR012318 Crp-type HTH domain XM56_01145 IPR000595 Cyclic nucleotide-binding domain XM56_01145 IPR018490 Cyclic nucleotide-binding-like XM56_01145 IPR018488 Cyclic nucleotide-binding, conserved site XM56_01150 IPR015946 K homology domain-like, alpha/beta XM56_01150 IPR003718 OsmC/Ohr family XM56_01150 IPR036102 OsmC/Ohr superfamily XM56_01155 IPR006083 Phosphoribulokinase/uridine kinase XM56_01155 IPR006082 Phosphoribulokinase XM56_01155 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_01160 IPR036685 YehU-like superfamily XM56_01160 IPR010648 Uncharacterised protein family UPF0270 XM56_01165 IPR012020 AB hydrolase 4 family XM56_01165 IPR000952 AB hydrolase 4, conserved site XM56_01165 IPR000073 Alpha/beta hydrolase fold-1 XM56_01165 IPR029058 Alpha/Beta hydrolase fold XM56_01170 IPR001123 Amino acid exporter protein, LeuE-type XM56_01175 IPR003719 Phenazine biosynthesis PhzF protein XM56_01180 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain XM56_01180 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF XM56_01180 IPR010068 Taurine ABC transporter, substrate-binding protein TauA XM56_01185 IPR003593 AAA+ ATPase domain XM56_01185 IPR003439 ABC transporter-like XM56_01185 IPR017871 ABC transporter, conserved site XM56_01185 IPR015859 ABC transporter, taurine import, TauD XM56_01185 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_01190 IPR035906 MetI-like superfamily XM56_01190 IPR000515 ABC transporter type 1, transmembrane domain MetI-like XM56_01195 IPR042098 Taurine dioxygenase TauD-like superfamily XM56_01195 IPR003819 TauD/TfdA-like domain XM56_01205 IPR001173 Glycosyltransferase 2-like XM56_01205 IPR029044 Nucleotide-diphospho-sugar transferases XM56_01210 IPR003593 AAA+ ATPase domain XM56_01210 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_01210 IPR003439 ABC transporter-like XM56_01210 IPR017871 ABC transporter, conserved site XM56_01210 IPR032781 ABC-transporter extension domain XM56_01215 IPR029039 Flavoprotein-like superfamily XM56_01215 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG XM56_01215 IPR003680 Flavodoxin-like fold XM56_01220 IPR036291 NAD(P)-binding domain superfamily XM56_01220 IPR006153 Cation/H+ exchanger XM56_01220 IPR004771 K+/H+ exchanger XM56_01220 IPR020884 Glutathione-regulated potassium-efflux system protein KefB XM56_01220 IPR003148 Regulator of K+ conductance, N-terminal XM56_01220 IPR038770 Sodium/solute symporter superfamily XM56_01225 IPR012658 Conserved hypothetical protein CHP02443 XM56_01230 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain XM56_01235 IPR007236 SlyX XM56_01240 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain XM56_01240 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal XM56_01240 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily XM56_01245 IPR013559 YheO-like XM56_01245 IPR039445 Transcriptional regulator DauR-like, HTH domain XM56_01245 IPR039446 Transcriptional regulator DauR-like XM56_01250 IPR003787 Sulphur relay, DsrE/F-like protein XM56_01250 IPR027396 DsrEFH-like XM56_01250 IPR017463 Sulphur relay, TusD/DsrE XM56_01255 IPR037450 Sulphur relay, TusC XM56_01255 IPR017462 Sulphur relay, TusC/DsrF XM56_01255 IPR003787 Sulphur relay, DsrE/F-like protein XM56_01255 IPR027396 DsrEFH-like XM56_01260 IPR007215 Sulphur relay, TusB/DsrH XM56_01260 IPR027396 DsrEFH-like XM56_01260 IPR023526 Sulphur relay, TusB XM56_01265 IPR006032 Ribosomal protein S12/S23 XM56_01265 IPR012340 Nucleic acid-binding, OB-fold XM56_01265 IPR005679 Ribosomal protein S12, bacterial-type XM56_01270 IPR023798 Ribosomal protein S7 domain XM56_01270 IPR036823 Ribosomal protein S7 domain superfamily XM56_01270 IPR000235 Ribosomal protein S5/S7 XM56_01270 IPR020606 Ribosomal protein S7, conserved site XM56_01270 IPR005717 Ribosomal protein S7, bacterial/organellar-type XM56_01275 IPR035649 EFG, domain V XM56_01275 IPR004161 Translation elongation factor EFTu-like, domain 2 XM56_01275 IPR009022 Elongation factor G, domain III XM56_01275 IPR035647 EF-G domain III/V-like XM56_01275 IPR041095 Elongation Factor G, domain II XM56_01275 IPR005517 Translation elongation factor EFG/EF2, domain IV XM56_01275 IPR000795 Transcription factor, GTP-binding domain XM56_01275 IPR000640 Elongation factor EFG, domain V-like XM56_01275 IPR005225 Small GTP-binding protein domain XM56_01275 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup XM56_01275 IPR020568 Ribosomal protein S5 domain 2-type fold XM56_01275 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_01275 IPR031157 Tr-type G domain, conserved site XM56_01275 IPR009000 Translation protein, beta-barrel domain superfamily XM56_01275 IPR004540 Translation elongation factor EFG/EF2 XM56_01280 IPR031157 Tr-type G domain, conserved site XM56_01280 IPR004161 Translation elongation factor EFTu-like, domain 2 XM56_01280 IPR009000 Translation protein, beta-barrel domain superfamily XM56_01280 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal XM56_01280 IPR033720 Elongation factor Tu, domain 2 XM56_01280 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal XM56_01280 IPR000795 Transcription factor, GTP-binding domain XM56_01280 IPR005225 Small GTP-binding protein domain XM56_01280 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_01280 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle XM56_01280 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain XM56_01285 IPR007419 BFD-like [2Fe-2S]-binding domain XM56_01285 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily XM56_01290 IPR008331 Ferritin/DPS protein domain XM56_01290 IPR009078 Ferritin-like superfamily XM56_01290 IPR009040 Ferritin-like diiron domain XM56_01290 IPR012347 Ferritin-like XM56_01290 IPR002024 Bacterioferritin XM56_01295 IPR036838 Ribosomal protein S10 domain superfamily XM56_01295 IPR027486 Ribosomal protein S10 domain XM56_01295 IPR018268 Ribosomal protein S10, conserved site XM56_01295 IPR001848 Ribosomal protein S10 XM56_01300 IPR009000 Translation protein, beta-barrel domain superfamily XM56_01300 IPR000597 Ribosomal protein L3 XM56_01300 IPR019927 Ribosomal protein L3, bacterial/organelle-type XM56_01300 IPR019926 Ribosomal protein L3, conserved site XM56_01305 IPR023574 Ribosomal protein L4 domain superfamily XM56_01305 IPR013005 50S ribosomal protein uL4 XM56_01305 IPR002136 Ribosomal protein L4/L1e XM56_01310 IPR013025 Ribosomal protein L25/L23 XM56_01310 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily XM56_01310 IPR012678 Ribosomal protein L23/L15e core domain superfamily XM56_01310 IPR001014 Ribosomal protein L23/L25, conserved site XM56_01315 IPR005880 Ribosomal protein L2, bacterial/organellar-type XM56_01315 IPR002171 Ribosomal protein L2 XM56_01315 IPR014722 Ribosomal protein L2, domain 2 XM56_01315 IPR022666 Ribosomal Proteins L2, RNA binding domain XM56_01315 IPR014726 Ribosomal protein L2, domain 3 XM56_01315 IPR008991 Translation protein SH3-like domain superfamily XM56_01315 IPR022671 Ribosomal protein L2, conserved site XM56_01315 IPR022669 Ribosomal protein L2, C-terminal XM56_01315 IPR012340 Nucleic acid-binding, OB-fold XM56_01320 IPR002222 Ribosomal protein S19/S15 XM56_01320 IPR005732 Ribosomal protein S19, bacterial-type XM56_01320 IPR020934 Ribosomal protein S19 conserved site XM56_01320 IPR023575 Ribosomal protein S19, superfamily XM56_01325 IPR001063 Ribosomal protein L22/L17 XM56_01325 IPR018260 Ribosomal protein L22/L17, conserved site XM56_01325 IPR036394 Ribosomal protein L22/L17 superfamily XM56_01325 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type XM56_01330 IPR001351 Ribosomal protein S3, C-terminal XM56_01330 IPR018280 Ribosomal protein S3, conserved site XM56_01330 IPR036419 Ribosomal protein S3, C-terminal domain superfamily XM56_01330 IPR005704 Ribosomal protein S3, bacterial-type XM56_01330 IPR009019 K homology domain superfamily, prokaryotic type XM56_01330 IPR004087 K Homology domain XM56_01330 IPR004044 K Homology domain, type 2 XM56_01330 IPR015946 K homology domain-like, alpha/beta XM56_01335 IPR000114 Ribosomal protein L16 XM56_01335 IPR036920 Ribosomal protein L10e/L16 superfamily XM56_01335 IPR016180 Ribosomal protein L10e/L16 XM56_01335 IPR020798 Ribosomal protein L16, conserved site XM56_01340 IPR001854 Ribosomal protein L29/L35 XM56_01340 IPR036049 Ribosomal protein L29/L35 superfamily XM56_01345 IPR019984 30S ribosomal protein S17 XM56_01345 IPR019979 Ribosomal protein S17, conserved site XM56_01345 IPR000266 Ribosomal protein S17/S11 XM56_01345 IPR012340 Nucleic acid-binding, OB-fold XM56_01350 IPR000218 Ribosomal protein L14P XM56_01350 IPR005745 Ribosomal protein L14P, bacterial-type XM56_01350 IPR019972 Ribosomal protein L14P, conserved site XM56_01350 IPR036853 Ribosomal protein L14 superfamily XM56_01355 IPR008991 Translation protein SH3-like domain superfamily XM56_01355 IPR005825 Ribosomal protein L24/L26, conserved site XM56_01355 IPR003256 Ribosomal protein L24 XM56_01355 IPR014722 Ribosomal protein L2, domain 2 XM56_01355 IPR041988 Ribosomal Protein L26/L24, KOW domain XM56_01355 IPR005824 KOW XM56_01360 IPR031310 Ribosomal protein L5, N-terminal XM56_01360 IPR031309 Ribosomal protein L5, C-terminal XM56_01360 IPR020930 Ribosomal protein L5, bacterial-type XM56_01360 IPR002132 Ribosomal protein L5 XM56_01360 IPR022803 Ribosomal protein L5 domain superfamily XM56_01365 IPR023036 Ribosomal protein S14, bacterial/plastid XM56_01365 IPR018271 Ribosomal protein S14, conserved site XM56_01365 IPR001209 Ribosomal protein S14 XM56_01370 IPR000630 Ribosomal protein S8 XM56_01370 IPR035987 Ribosomal protein S8 superfamily XM56_01375 IPR000702 Ribosomal protein L6 XM56_01375 IPR020040 Ribosomal protein L6, alpha-beta domain XM56_01375 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily XM56_01375 IPR019906 Ribosomal protein L6, bacterial-type XM56_01375 IPR002358 Ribosomal protein L6, conserved site XM56_01380 IPR005484 Ribosomal protein L18 XM56_01380 IPR004389 Ribosomal protein L18, bacterial-type XM56_01385 IPR020568 Ribosomal protein S5 domain 2-type fold XM56_01385 IPR005712 Ribosomal protein S5, bacterial-type XM56_01385 IPR000851 Ribosomal protein S5 XM56_01385 IPR005324 Ribosomal protein S5, C-terminal XM56_01385 IPR018192 Ribosomal protein S5, N-terminal, conserved site XM56_01385 IPR013810 Ribosomal protein S5, N-terminal XM56_01385 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup XM56_01390 IPR005996 Ribosomal protein L30, bacterial-type XM56_01390 IPR018038 Ribosomal protein L30, conserved site XM56_01390 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain XM56_01390 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily XM56_01395 IPR021131 Ribosomal protein L18e/L15P XM56_01395 IPR036227 Ribosomal L18e/L15P superfamily XM56_01395 IPR030878 Ribosomal protein L15 XM56_01395 IPR005749 Ribosomal protein L15, bacterial-type XM56_01395 IPR001196 Ribosomal protein L15, conserved site XM56_01400 IPR030659 SecY conserved site XM56_01400 IPR026593 Protein translocase subunit SecY XM56_01400 IPR023201 SecY domain superfamily XM56_01400 IPR002208 SecY/SEC61-alpha family XM56_01405 IPR035977 Ribosomal protein L36 superfamily XM56_01405 IPR000473 Ribosomal protein L36 XM56_01410 IPR019980 Ribosomal protein S13, bacterial-type XM56_01410 IPR018269 Ribosomal protein S13, conserved site XM56_01410 IPR010979 Ribosomal protein S13-like, H2TH XM56_01410 IPR001892 Ribosomal protein S13 XM56_01410 IPR027437 30s ribosomal protein S13, C-terminal XM56_01415 IPR001971 Ribosomal protein S11 XM56_01415 IPR019981 Ribosomal protein S11, bacterial-type XM56_01415 IPR036967 Ribosomal protein S11 superfamily XM56_01415 IPR018102 Ribosomal S11, conserved site XM56_01420 IPR022801 Ribosomal protein S4/S9 XM56_01420 IPR036986 RNA-binding S4 domain superfamily XM56_01420 IPR002942 RNA-binding S4 domain XM56_01420 IPR018079 Ribosomal protein S4, conserved site XM56_01420 IPR005709 Ribosomal protein S4, bacterial-type XM56_01420 IPR001912 Ribosomal protein S4/S9, N-terminal XM56_01425 IPR011260 RNA polymerase, alpha subunit, C-terminal XM56_01425 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type XM56_01425 IPR036603 RNA polymerase, RBP11-like subunit XM56_01425 IPR011773 DNA-directed RNA polymerase, alpha subunit XM56_01425 IPR011262 DNA-directed RNA polymerase, insert domain XM56_01425 IPR036643 DNA-directed RNA polymerase, insert domain superfamily XM56_01430 IPR000456 Ribosomal protein L17 XM56_01430 IPR036373 Ribosomal protein L17 superfamily XM56_01435 IPR018961 DnaJ homologue, subfamily C, member 28, conserved domain XM56_01440 IPR011788 Zn(II)-responsive transcriptional regulator XM56_01440 IPR000551 MerR-type HTH domain XM56_01440 IPR009061 Putative DNA-binding domain superfamily XM56_01445 IPR005589 Alternative ribosome-rescue factor A XM56_01455 IPR036019 Gated mechanosensitive channel XM56_01455 IPR019823 Large-conductance mechanosensitive channel, conserved site XM56_01455 IPR001185 Large-conductance mechanosensitive channel XM56_01455 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L XM56_01460 IPR006036 Potassium uptake protein TrkA XM56_01460 IPR003148 Regulator of K+ conductance, N-terminal XM56_01460 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily XM56_01460 IPR006037 Regulator of K+ conductance, C-terminal XM56_01460 IPR036291 NAD(P)-binding domain superfamily XM56_01465 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XM56_01465 IPR023541 rRNA small subunit methyltransferase B, enterobacteriaceae XM56_01465 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site XM56_01465 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type XM56_01465 IPR035926 NusB-like superfamily XM56_01465 IPR006027 NusB/RsmB/TIM44 XM56_01465 IPR023267 RNA (C5-cytosine) methyltransferase XM56_01465 IPR004573 rRNA small subunit methyltransferase B XM56_01470 IPR005794 Methionyl-tRNA formyltransferase XM56_01470 IPR005793 Formyl transferase, C-terminal XM56_01470 IPR037022 Formyl transferase, C-terminal domain superfamily XM56_01470 IPR036477 Formyl transferase, N-terminal domain superfamily XM56_01470 IPR002376 Formyl transferase, N-terminal XM56_01470 IPR011034 Formyl transferase-like, C-terminal domain superfamily XM56_01470 IPR001555 Phosphoribosylglycinamide formyltransferase, active site XM56_01470 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain XM56_01475 IPR036821 Peptide deformylase superfamily XM56_01475 IPR023635 Peptide deformylase XM56_01480 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_01480 IPR041614 DprA, winged helix domain XM56_01480 IPR003488 DNA recombination-mediator protein A XM56_01485 IPR007456 Smg XM56_01490 IPR000380 DNA topoisomerase, type IA XM56_01490 IPR013498 DNA topoisomerase, type IA, zn finger XM56_01495 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily XM56_01495 IPR006070 YrdC-like domain XM56_01495 IPR023535 Threonylcarbamoyl-AMP synthase XM56_01500 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase XM56_01500 IPR036291 NAD(P)-binding domain superfamily XM56_01500 IPR011342 Shikimate dehydrogenase XM56_01500 IPR041121 SDH, C-terminal XM56_01500 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal XM56_01500 IPR022893 Shikimate dehydrogenase family XM56_01505 IPR001451 Hexapeptide repeat XM56_01505 IPR011004 Trimeric LpxA-like superfamily XM56_01540 IPR003346 Transposase, IS116/IS110/IS902 XM56_01540 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal XM56_01545 IPR029062 Class I glutamine amidotransferase-like XM56_01545 IPR033752 MetA family XM56_01545 IPR005697 Homoserine O-succinyltransferase MetA XM56_01550 IPR006252 Malate synthase A XM56_01550 IPR001465 Malate synthase XM56_01550 IPR011076 Malate synthase-like superfamily XM56_01550 IPR019830 Malate synthase, conserved site XM56_01555 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily XM56_01555 IPR039556 ICL/PEPM domain XM56_01555 IPR040442 Pyruvate kinase-like domain superfamily XM56_01555 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site XM56_01555 IPR006254 Isocitrate lyase XM56_01560 IPR010452 Isocitrate dehydrogenase kinasephosphatase XM56_01565 IPR036390 Winged helix DNA-binding domain superfamily XM56_01565 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_01565 IPR005471 Transcription regulator IclR, N-terminal XM56_01565 IPR014757 Transcription regulator IclR, C-terminal XM56_01565 IPR029016 GAF-like domain superfamily XM56_01570 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily XM56_01570 IPR033706 Methionine synthase, B12-binding domain XM56_01570 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain XM56_01570 IPR011822 Cobalamin-dependent methionine synthase XM56_01570 IPR036589 Homocysteine-binding domain superfamily XM56_01570 IPR006158 Cobalamin (vitamin B12)-binding domain XM56_01570 IPR036594 Methionine synthase domain XM56_01570 IPR011005 Dihydropteroate synthase-like XM56_01570 IPR003726 Homocysteine-binding domain XM56_01570 IPR000489 Pterin-binding domain XM56_01570 IPR004223 Vitamin B12-dependent methionine synthase, activation domain XM56_01570 IPR036724 Cobalamin-binding domain superfamily XM56_01575 IPR012334 Pectin lyase fold XM56_01575 IPR025157 Hemagglutinin repeat XM56_01575 IPR008638 Filamentous haemagglutinin, N-terminal XM56_01575 IPR011050 Pectin lyase fold/virulence factor XM56_01580 IPR005565 Haemolysin activator HlyB, C-terminal XM56_01580 IPR013686 Polypeptide-transport-associated, ShlB-type XM56_01580 IPR034746 POTRA domain XM56_01580 IPR027282 Two partner secretion pathway transporter XM56_01580 IPR035251 ShlB, POTRA domain XM56_01585 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 XM56_01585 IPR038770 Sodium/solute symporter superfamily XM56_01585 IPR004710 Bile acid:sodium symporter XM56_01590 IPR036393 Acetylglutamate kinase-like superfamily XM56_01590 IPR002912 ACT domain XM56_01590 IPR041745 Lysine-sensitive aspartokinase 3, N-terminal catalytic domain XM56_01590 IPR001048 Aspartate/glutamate/uridylate kinase XM56_01590 IPR005260 Aspartate kinase, monofunctional class XM56_01590 IPR018042 Aspartate kinase, conserved site XM56_01590 IPR001341 Aspartate kinase XM56_01595 IPR018189 Phosphoglucose isomerase, conserved site XM56_01595 IPR035476 Phosphoglucose isomerase, SIS domain 1 XM56_01595 IPR023096 Phosphoglucose isomerase, C-terminal XM56_01595 IPR001672 Phosphoglucose isomerase (PGI) XM56_01595 IPR035482 Phosphoglucose isomerase, SIS domain 2 XM56_01600 IPR009315 Phosphate-starvation-induced PsiE XM56_01600 IPR020948 Phosphate-starvation-induced PsiE-like XM56_01605 IPR035906 MetI-like superfamily XM56_01605 IPR000515 ABC transporter type 1, transmembrane domain MetI-like XM56_01610 IPR029345 Maltose transport system permease protein MalF, P2 domain XM56_01610 IPR035277 MalF, N-terminal XM56_01610 IPR030156 Maltose/maltodextrin transport system permease protein MalF-like XM56_01610 IPR000515 ABC transporter type 1, transmembrane domain MetI-like XM56_01610 IPR035906 MetI-like superfamily XM56_01615 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein XM56_01615 IPR006061 Solute-binding family 1, conserved site XM56_01615 IPR006059 Bacterial extracellular solute-binding protein XM56_01620 IPR040582 MalK, OB fold domain XM56_01620 IPR003439 ABC transporter-like XM56_01620 IPR017871 ABC transporter, conserved site XM56_01620 IPR015855 ABC transporter, maltose/maltodextrin import, MalK XM56_01620 IPR008995 Molybdate/tungstate binding, C-terminal XM56_01620 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_01620 IPR003593 AAA+ ATPase domain XM56_01625 IPR023738 Maltoporin XM56_01625 IPR003192 Porin, LamB-type XM56_01625 IPR036998 Porin, LamB-type superfamily XM56_01630 IPR010794 Maltose operon periplasmic XM56_01635 IPR011009 Protein kinase-like domain superfamily XM56_01640 IPR007440 Chorismate--pyruvate lyase XM56_01640 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily XM56_01645 IPR000537 UbiA prenyltransferase family XM56_01645 IPR039653 Prenyltransferase XM56_01645 IPR030470 UbiA prenyltransferase conserved site XM56_01645 IPR006370 4-hydroxybenzoate polyprenyltransferase-like XM56_01650 IPR002123 Phospholipid/glycerol acyltransferase XM56_01650 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB XM56_01650 IPR041728 GPAT/DHAPAT, acyltransferase domain XM56_01650 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase XM56_01655 IPR036945 Diacylglycerol kinase (DAGK) superfamily XM56_01655 IPR033718 Diacylglycerol kinase, prokaryotic XM56_01655 IPR000829 DAGK family XM56_01660 IPR006200 Transcription regulator LexA XM56_01660 IPR036390 Winged helix DNA-binding domain superfamily XM56_01660 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_01660 IPR039418 LexA-like XM56_01660 IPR006199 LexA repressor, DNA-binding domain XM56_01660 IPR015927 Peptidase S24/S26A/S26B/S26C XM56_01660 IPR006197 Peptidase S24, LexA-like XM56_01660 IPR036286 LexA/Signal peptidase-like superfamily XM56_01665 IPR026042 Stress response protein YjbJ XM56_01665 IPR008462 CsbD-like domain XM56_01665 IPR036629 YjbJ superfamily XM56_01670 IPR002481 Ferric-uptake regulator XM56_01670 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_01670 IPR036390 Winged helix DNA-binding domain superfamily XM56_01675 IPR002656 Acyltransferase 3 XM56_01675 IPR036514 SGNH hydrolase superfamily XM56_01680 IPR035587 DUS-like, FMN-binding domain XM56_01680 IPR004653 tRNA-dihydrouridine(20/20a) synthase XM56_01680 IPR013785 Aldolase-type TIM barrel XM56_01680 IPR001269 tRNA-dihydrouridine synthase XM56_01680 IPR018517 tRNA-dihydrouridine synthase, conserved site XM56_01685 IPR014318 Phage shock protein, PspG XM56_01695 IPR036291 NAD(P)-binding domain superfamily XM56_01695 IPR020843 Polyketide synthase, enoylreductase domain XM56_01695 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site XM56_01695 IPR013154 Alcohol dehydrogenase, N-terminal XM56_01695 IPR013149 Alcohol dehydrogenase, C-terminal XM56_01695 IPR011032 GroES-like superfamily XM56_01700 IPR007692 DNA helicase, DnaB type XM56_01700 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_01700 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal XM56_01700 IPR007693 DNA helicase, DnaB-like, N-terminal XM56_01700 IPR007694 DNA helicase, DnaB-like, C-terminal XM56_01700 IPR003593 AAA+ ATPase domain XM56_01700 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily XM56_01705 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal XM56_01705 IPR011079 Alanine racemase, C-terminal XM56_01705 IPR001608 Alanine racemase, N-terminal XM56_01705 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site XM56_01705 IPR029066 PLP-binding barrel XM56_01705 IPR000821 Alanine racemase XM56_01710 IPR000796 Aspartate/other aminotransferase XM56_01710 IPR015424 Pyridoxal phosphate-dependent transferase XM56_01710 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 XM56_01710 IPR015421 Pyridoxal phosphate-dependent transferase, major domain XM56_01710 IPR004839 Aminotransferase, class I/classII XM56_01710 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site XM56_01720 IPR007351 Uncharacterised protein YjbR XM56_01720 IPR038056 YjbR-like superfamily XM56_01725 IPR041102 UvrA, interaction domain XM56_01725 IPR004602 UvrABC system subunit A XM56_01725 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_01725 IPR017871 ABC transporter, conserved site XM56_01725 IPR003439 ABC transporter-like XM56_01725 IPR041552 UvrA DNA-binding domain XM56_01730 IPR011344 Single-stranded DNA-binding protein XM56_01730 IPR012340 Nucleic acid-binding, OB-fold XM56_01730 IPR000424 Primosome PriB/single-strand DNA-binding XM56_01735 IPR004107 Integrase, SAM-like, N-terminal XM56_01735 IPR010998 Integrase/recombinase, N-terminal XM56_01735 IPR002104 Integrase, catalytic domain XM56_01735 IPR013762 Integrase-like, catalytic domain superfamily XM56_01735 IPR011010 DNA breaking-rejoining enzyme, catalytic core XM56_01765 IPR009057 Homeobox-like domain superfamily XM56_01765 IPR002514 Transposase IS3/IS911family XM56_01770 IPR025948 HTH-like domain XM56_01770 IPR001584 Integrase, catalytic core XM56_01770 IPR012337 Ribonuclease H-like superfamily XM56_01770 IPR036397 Ribonuclease H superfamily XM56_01780 IPR012893 HipA-like, C-terminal XM56_01780 IPR017508 HipA, N-terminal subdomain 1 XM56_01795 IPR006043 Xanthine/uracil/vitamin C permease XM56_01800 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria XM56_01800 IPR038770 Sodium/solute symporter superfamily XM56_01800 IPR018422 Cation/H+ exchanger, CPA1 family XM56_01800 IPR006153 Cation/H+ exchanger XM56_01805 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_01805 IPR005119 LysR, substrate-binding XM56_01805 IPR036390 Winged helix DNA-binding domain superfamily XM56_01805 IPR000847 Transcription regulator HTH, LysR XM56_01810 IPR023760 Holin-like protein CidA XM56_01810 IPR005538 LrgA/CidA family XM56_01820 IPR017871 ABC transporter, conserved site XM56_01820 IPR003439 ABC transporter-like XM56_01820 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type XM56_01820 IPR003593 AAA+ ATPase domain XM56_01820 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_01825 IPR035906 MetI-like superfamily XM56_01825 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain XM56_01825 IPR000515 ABC transporter type 1, transmembrane domain MetI-like XM56_01830 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain XM56_01830 IPR000515 ABC transporter type 1, transmembrane domain MetI-like XM56_01830 IPR035906 MetI-like superfamily XM56_01835 IPR018313 Solute-binding protein family 3, conserved site XM56_01835 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF XM56_01845 IPR030857 Lipid A biosynthesis palmitoleoyltransferase, LpxP XM56_01845 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase XM56_01845 IPR004960 Bacterial lipid A biosynthesis acyltransferase XM56_01850 IPR001898 Solute carrier family 13 XM56_01850 IPR030676 Citrate carrier CitT-related XM56_01855 IPR002059 Cold-shock protein, DNA-binding XM56_01855 IPR012340 Nucleic acid-binding, OB-fold XM56_01855 IPR019844 Cold-shock (CSD) domain XM56_01855 IPR011129 Cold shock domain XM56_01855 IPR012156 Cold shock, CspA XM56_01860 IPR012340 Nucleic acid-binding, OB-fold XM56_01860 IPR002059 Cold-shock protein, DNA-binding XM56_01860 IPR019844 Cold-shock (CSD) domain XM56_01860 IPR011129 Cold shock domain XM56_01860 IPR012156 Cold shock, CspA XM56_01865 IPR008816 Glycine zipper 2TM domain XM56_01870 IPR001789 Signal transduction response regulator, receiver domain XM56_01870 IPR011006 CheY-like superfamily XM56_01870 IPR000160 GGDEF domain XM56_01870 IPR029787 Nucleotide cyclase XM56_01875 IPR002197 DNA binding HTH domain, Fis-type XM56_01875 IPR009057 Homeobox-like domain superfamily XM56_01875 IPR005412 DNA-binding protein Fis XM56_01880 IPR013785 Aldolase-type TIM barrel XM56_01880 IPR035587 DUS-like, FMN-binding domain XM56_01880 IPR032887 tRNA-dihydrouridine synthase B XM56_01880 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal XM56_01880 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 XM56_01880 IPR001269 tRNA-dihydrouridine synthase XM56_01880 IPR018517 tRNA-dihydrouridine synthase, conserved site XM56_01885 IPR004498 Ribosomal protein L11 methyltransferase XM56_01885 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XM56_01890 IPR011849 Sodium/pantothenate symporter XM56_01890 IPR001734 Sodium/solute symporter XM56_01890 IPR018212 Sodium/solute symporter, conserved site XM56_01890 IPR038377 Sodium/glucose symporter superfamily XM56_01895 IPR010398 Protein of unknown function DUF997 XM56_01900 IPR005482 Biotin carboxylase, C-terminal XM56_01900 IPR011054 Rudiment single hybrid motif XM56_01900 IPR016185 Pre-ATP-grasp domain superfamily XM56_01900 IPR011761 ATP-grasp fold XM56_01900 IPR013815 ATP-grasp fold, subdomain 1 XM56_01900 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain XM56_01900 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase XM56_01900 IPR011764 Biotin carboxylation domain XM56_01900 IPR005481 Biotin carboxylase-like, N-terminal domain XM56_01905 IPR011053 Single hybrid motif XM56_01905 IPR001249 Acetyl-CoA biotin carboxyl carrier XM56_01905 IPR001882 Biotin-binding site XM56_01905 IPR000089 Biotin/lipoyl attachment XM56_01910 IPR036441 Dehydroquinase, class II superfamily XM56_01910 IPR018509 Dehydroquinase, class II, conserved site XM56_01910 IPR001874 Dehydroquinase, class II XM56_01915 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ XM56_01915 IPR013130 Ferric reductase transmembrane component-like domain XM56_01920 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP XM56_01920 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily XM56_01920 IPR000572 Oxidoreductase, molybdopterin-binding domain XM56_01925 IPR013149 Alcohol dehydrogenase, C-terminal XM56_01925 IPR036291 NAD(P)-binding domain superfamily XM56_01925 IPR013154 Alcohol dehydrogenase, N-terminal XM56_01925 IPR011032 GroES-like superfamily XM56_01925 IPR020843 Polyketide synthase, enoylreductase domain XM56_01925 IPR014188 Acrylyl-CoA reductase AcuI XM56_01930 IPR029787 Nucleotide cyclase XM56_01930 IPR035919 EAL domain superfamily XM56_01930 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 XM56_01930 IPR001633 EAL domain XM56_01930 IPR000160 GGDEF domain XM56_01935 IPR004753 Cell shape determining protein MreB XM56_01940 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 XM56_01940 IPR007221 Rod shape-determining protein MreC XM56_01940 IPR042177 Cell/Rod shape-determining protein MreC, domain 1 XM56_01945 IPR007227 Cell shape-determining protein MreD XM56_01945 IPR026034 Cell shape-determining protein MreD, proteobacterial type XM56_01950 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein XM56_01950 IPR029001 Inosine triphosphate pyrophosphatase-like XM56_01955 IPR022967 RNA-binding domain, S1 XM56_01955 IPR004659 Ribonuclease E/G XM56_01955 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G XM56_01955 IPR003029 S1 domain XM56_01955 IPR012340 Nucleic acid-binding, OB-fold XM56_01960 IPR011836 Conserved hypothetical protein CHP02099 XM56_01960 IPR032712 AsmA-like, C-terminal XM56_01960 IPR025263 Domain of unknown function DUF3971 XM56_01965 IPR001110 Uncharacterised protein family UPF0012, conserved site XM56_01965 IPR036526 Carbon-nitrogen hydrolase superfamily XM56_01965 IPR003010 Carbon-nitrogen hydrolase XM56_01970 IPR025502 TldD XM56_01970 IPR036059 Metalloprotease TldD/PmbA superfamily XM56_01970 IPR002510 Metalloprotease TldD/PmbA XM56_01970 IPR035068 Metalloprotease TldD/PmbA, N-terminal XM56_01985 IPR041508 Toxin complex C-like repeat XM56_01985 IPR011324 Cytotoxic necrotizing factor-like, catalytic XM56_01985 IPR022385 Rhs repeat-associated core XM56_01985 IPR008430 Cytotoxic necrotizing factor, Rho-activating domain XM56_01985 IPR037040 Cytotoxic necrotizing factor, Rho-activating domain superfamily XM56_02015 IPR041079 Neuraminidase-like domain XM56_02015 IPR040840 Tc toxin complex TcA, C-terminal TcB-binding domain XM56_02030 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_02030 IPR000847 Transcription regulator HTH, LysR XM56_02030 IPR005119 LysR, substrate-binding XM56_02030 IPR036390 Winged helix DNA-binding domain superfamily XM56_02035 IPR005119 LysR, substrate-binding XM56_02035 IPR000847 Transcription regulator HTH, LysR XM56_02035 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_02035 IPR036390 Winged helix DNA-binding domain superfamily XM56_02040 IPR012451 Protein of unknown function DUF1656 XM56_02045 IPR039562 Membrane fusion protein, biotin-lipoyl like domain XM56_02045 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA XM56_02045 IPR006143 RND efflux pump, membrane fusion protein XM56_02050 IPR023706 Para-hydroxybenzoic acid efflux pump, subunit AaeB XM56_02050 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein XM56_02055 IPR016162 Aldehyde dehydrogenase, N-terminal XM56_02055 IPR015590 Aldehyde dehydrogenase domain XM56_02055 IPR029510 Aldehyde dehydrogenase, glutamic acid active site XM56_02055 IPR010102 Succinate semialdehyde dehydrogenase XM56_02055 IPR016160 Aldehyde dehydrogenase, cysteine active site XM56_02055 IPR016161 Aldehyde/histidinol dehydrogenase XM56_02055 IPR016163 Aldehyde dehydrogenase, C-terminal XM56_02065 IPR035905 Barstar-like superfamily XM56_02065 IPR000468 Barstar (barnase inhibitor) XM56_02070 IPR023153 PSPTO4464-like domain superfamily XM56_02070 IPR006839 Ribosome-associated, YjgA XM56_02075 IPR036059 Metalloprotease TldD/PmbA superfamily XM56_02075 IPR002510 Metalloprotease TldD/PmbA XM56_02075 IPR035068 Metalloprotease TldD/PmbA, N-terminal XM56_02085 IPR009155 Cytochrome b562 XM56_02085 IPR010980 Cytochrome c/b562 XM56_02090 IPR023459 Transcription elongation factor GreA/GreB family XM56_02090 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal XM56_02090 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain XM56_02090 IPR028625 Regulator of nucleoside diphosphate kinase XM56_02090 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily XM56_02120 IPR011059 Metal-dependent hydrolase, composite domain superfamily XM56_02120 IPR032466 Metal-dependent hydrolase XM56_02120 IPR020043 Deacetylase Atu3266-like XM56_02120 IPR006680 Amidohydrolase-related XM56_02125 IPR018319 L-seryl-tRNA selenium transferase-like XM56_02125 IPR015421 Pyridoxal phosphate-dependent transferase, major domain XM56_02125 IPR015424 Pyridoxal phosphate-dependent transferase XM56_02125 IPR006337 D-glucosaminate-6-phosphate ammonia lyase DgaE-like XM56_02130 IPR010763 2-dehydro-3-deoxy-phosphogluconate aldolase XM56_02130 IPR013785 Aldolase-type TIM barrel XM56_02135 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily XM56_02135 IPR019405 Lactonase, 7-bladed beta propeller XM56_02135 IPR015943 WD40/YVTN repeat-like-containing domain superfamily XM56_02140 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_02140 IPR007737 Mga helix-turn-helix domain XM56_02140 IPR011608 PRD domain XM56_02140 IPR036634 PRD domain superfamily XM56_02140 IPR002178 PTS EIIA type-2 domain XM56_02140 IPR036095 PTS system IIB component-like superfamily XM56_02140 IPR016152 Phosphotransferase/anion transporter XM56_02140 IPR013196 Helix-turn-helix, type 11 XM56_02140 IPR036390 Winged helix DNA-binding domain superfamily XM56_02140 IPR013011 Phosphotransferase system, EIIB component, type 2 XM56_02145 IPR001387 Cro/C1-type helix-turn-helix domain XM56_02145 IPR013430 Toxin-antitoxin system, antidote protein, HigA XM56_02145 IPR010982 Lambda repressor-like, DNA-binding domain superfamily XM56_02150 IPR007711 Toxin HigB-1 XM56_02150 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily XM56_02155 IPR036412 HAD-like superfamily XM56_02155 IPR001757 P-type ATPase XM56_02155 IPR006068 Cation-transporting P-type ATPase, C-terminal XM56_02155 IPR004014 Cation-transporting P-type ATPase, N-terminal XM56_02155 IPR023299 P-type ATPase, cytoplasmic domain N XM56_02155 IPR006415 P-type ATPase, subfamily IIIB XM56_02155 IPR008250 P-type ATPase, A domain superfamily XM56_02155 IPR023214 HAD superfamily XM56_02155 IPR018303 P-type ATPase, phosphorylation site XM56_02155 IPR023298 P-type ATPase, transmembrane domain superfamily XM56_02160 IPR012771 Trehalose operon repressor XM56_02160 IPR000843 LacI-type HTH domain XM56_02160 IPR010982 Lambda repressor-like, DNA-binding domain superfamily XM56_02160 IPR028082 Periplasmic binding protein-like I XM56_02165 IPR013013 Phosphotransferase system, EIIC component, type 1 XM56_02165 IPR003352 Phosphotransferase system, EIIC XM56_02165 IPR011296 Phosphotransferase system, trehalose-specific IIBC component XM56_02165 IPR001996 Phosphotransferase system, IIB component, type 1 XM56_02165 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site XM56_02165 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component XM56_02165 IPR036878 Glucose permease domain IIB XM56_02170 IPR017853 Glycoside hydrolase superfamily XM56_02170 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) XM56_02170 IPR012769 Trehalose-6-phosphate hydrolase XM56_02170 IPR006047 Glycosyl hydrolase, family 13, catalytic domain XM56_02170 IPR013780 Glycosyl hydrolase, all-beta XM56_02185 IPR007296 Domain of unknown function DUF403 XM56_02185 IPR025841 Circularly permuted ATP-grasp type 2 XM56_02190 IPR016450 Uncharacterised conserved protein UCP005522 XM56_02190 IPR025841 Circularly permuted ATP-grasp type 2 XM56_02195 IPR006056 RidA family XM56_02195 IPR019897 RidA, conserved site XM56_02195 IPR006175 YjgF/YER057c/UK114 family XM56_02195 IPR035959 RutC-like superfamily XM56_02200 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily XM56_02200 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal XM56_02200 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily XM56_02200 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal XM56_02200 IPR002801 Aspartate transcarbamylase regulatory subunit XM56_02205 IPR002082 Aspartate carbamoyltransferase XM56_02205 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily XM56_02205 IPR006130 Aspartate/ornithine carbamoyltransferase XM56_02205 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding XM56_02205 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain XM56_02210 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site XM56_02210 IPR035895 HPr-like superfamily XM56_02210 IPR002114 Phosphotransferase system, HPr serine phosphorylation site XM56_02210 IPR000032 Phosphocarrier protein HPr-like XM56_02215 IPR005337 RapZ-like family XM56_02215 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_02220 IPR016152 Phosphotransferase/anion transporter XM56_02220 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN XM56_02220 IPR002178 PTS EIIA type-2 domain XM56_02225 IPR036567 Ribosome hibernation promotion factor-like XM56_02225 IPR003489 Ribosome hibernation promoting factor/RaiA XM56_02230 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily XM56_02230 IPR007634 RNA polymerase sigma factor 54, DNA-binding XM56_02230 IPR000394 RNA polymerase sigma factor 54 XM56_02230 IPR007046 RNA polymerase sigma factor 54, core-binding domain XM56_02235 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_02235 IPR030921 LPS export ABC transporter, ATP-binding protein LptB XM56_02235 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal XM56_02235 IPR017871 ABC transporter, conserved site XM56_02235 IPR003439 ABC transporter-like XM56_02235 IPR003593 AAA+ ATPase domain XM56_02240 IPR014340 Lipopolysaccharide export system protein LptA XM56_02240 IPR005653 Organic solvent tolerance-like, N-terminal XM56_02245 IPR010664 Lipopolysaccharide assembly, LptC-related XM56_02245 IPR026265 Lipopolysaccharide export system protein LptC XM56_02250 IPR023214 HAD superfamily XM56_02250 IPR010023 KdsC family XM56_02250 IPR036412 HAD-like superfamily XM56_02255 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type XM56_02255 IPR000644 CBS domain XM56_02255 IPR001347 Sugar isomerase (SIS) XM56_02255 IPR035474 KpsF-like, SIS domain XM56_02260 IPR004481 Sodium/potassium/calcium exchanger XM56_02260 IPR004837 Sodium/calcium exchanger membrane region XM56_02265 IPR003593 AAA+ ATPase domain XM56_02265 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_02265 IPR003439 ABC transporter-like XM56_02265 IPR017871 ABC transporter, conserved site XM56_02265 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl XM56_02270 IPR030802 ABC transporter permease MalE XM56_02270 IPR003453 ABC transport permease subunit MlaE, Proteobacteria XM56_02275 IPR003399 Mce/MlaD XM56_02275 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD XM56_02280 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC XM56_02280 IPR042245 Tgt2/MlaC superfamily XM56_02285 IPR036513 STAS domain superfamily XM56_02285 IPR002645 STAS domain XM56_02290 IPR036065 BolA-like superfamily XM56_02290 IPR002634 BolA protein XM56_02295 IPR001986 Enolpyruvate transferase domain XM56_02295 IPR036968 Enolpyruvate transferase domain superfamily XM56_02295 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase XM56_02295 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta XM56_02300 IPR001478 PDZ domain XM56_02300 IPR001940 Peptidase S1C XM56_02300 IPR036034 PDZ superfamily XM56_02300 IPR011783 Peptidase S1C, DegS XM56_02300 IPR009003 Peptidase S1, PA clan XM56_02305 IPR009003 Peptidase S1, PA clan XM56_02305 IPR011782 Peptidase S1C, Do XM56_02305 IPR001478 PDZ domain XM56_02305 IPR036034 PDZ superfamily XM56_02305 IPR001940 Peptidase S1C XM56_02310 IPR009386 Protein of unknown function DUF1043 XM56_02315 IPR030870 Cell division protein ZapE XM56_02315 IPR005654 ATPase, AFG1-like XM56_02315 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_02320 IPR023563 Ribosomal protein L13, conserved site XM56_02320 IPR005822 Ribosomal protein L13 XM56_02320 IPR005823 Ribosomal protein L13, bacterial-type XM56_02320 IPR036899 Ribosomal protein L13 superfamily XM56_02325 IPR020574 Ribosomal protein S9, conserved site XM56_02325 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup XM56_02325 IPR020568 Ribosomal protein S5 domain 2-type fold XM56_02325 IPR023035 Ribosomal protein S9, bacterial/plastid XM56_02325 IPR000754 Ribosomal protein S9 XM56_02330 IPR004046 Glutathione S-transferase, C-terminal XM56_02330 IPR036282 Glutathione S-transferase, C-terminal domain superfamily XM56_02330 IPR034341 Stringent starvation protein A, N-terminal XM56_02330 IPR010987 Glutathione S-transferase, C-terminal-like XM56_02330 IPR036249 Thioredoxin-like superfamily XM56_02330 IPR004045 Glutathione S-transferase, N-terminal XM56_02330 IPR040079 Glutathione Transferase family XM56_02335 IPR007481 Stringent starvation protein B XM56_02335 IPR036760 SspB-like superfamily XM56_02350 IPR036188 FAD/NAD(P)-binding domain superfamily XM56_02350 IPR028261 Dihydroprymidine dehydrogenase domain II XM56_02350 IPR023753 FAD/NAD(P)-binding domain XM56_02350 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 XM56_02350 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain XM56_02350 IPR009051 Alpha-helical ferredoxin XM56_02355 IPR013785 Aldolase-type TIM barrel XM56_02355 IPR017932 Glutamine amidotransferase type 2 domain XM56_02355 IPR002489 Glutamate synthase, alpha subunit, C-terminal XM56_02355 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily XM56_02355 IPR006982 Glutamate synthase, central-N XM56_02355 IPR002932 Glutamate synthase domain XM56_02355 IPR029055 Nucleophile aminohydrolases, N-terminal XM56_02360 IPR007197 Radical SAM XM56_02360 IPR005911 Protein YhcC-like XM56_02360 IPR023404 Radical SAM, alpha/beta horseshoe XM56_02360 IPR032432 Radical SAM, C-terminal extension XM56_02360 IPR006638 Elp3/MiaB/NifB XM56_02360 IPR039661 ELP3/YhcC XM56_02365 IPR001789 Signal transduction response regulator, receiver domain XM56_02365 IPR035965 PAS domain superfamily XM56_02365 IPR036641 HPT domain superfamily XM56_02365 IPR040642 Histidine kinase receptor ArcB, transmembrane domain XM56_02365 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily XM56_02365 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain XM56_02365 IPR005467 Histidine kinase domain XM56_02365 IPR000014 PAS domain XM56_02365 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XM56_02365 IPR003594 Histidine kinase/HSP90-like ATPase XM56_02365 IPR011006 CheY-like superfamily XM56_02365 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily XM56_02365 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain XM56_02365 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB XM56_02365 IPR013767 PAS fold XM56_02365 IPR000700 PAS-associated, C-terminal XM56_02365 IPR004358 Signal transduction histidine kinase-related protein, C-terminal XM56_02370 IPR029062 Class I glutamine amidotransferase-like XM56_02370 IPR026041 Glyoxalase ElbB XM56_02375 IPR023346 Lysozyme-like domain superfamily XM56_02375 IPR001264 Glycosyl transferase, family 51 XM56_02375 IPR036950 Penicillin binding protein transglycosylase domain XM56_02375 IPR011812 Biosynthetic peptidoglycan transglycosylase XM56_02380 IPR007055 BON domain XM56_02380 IPR014004 Transport-associated and nodulation domain, bacteria XM56_02385 IPR001347 Sugar isomerase (SIS) XM56_02385 IPR035461 GmhA/DiaA XM56_02385 IPR023070 DnaA initiator-associating protein XM56_02390 IPR003509 Uncharacterised protein family UPF0102 XM56_02390 IPR011335 Restriction endonuclease type II-like XM56_02390 IPR011856 tRNA endonuclease-like domain superfamily XM56_02395 IPR007443 Penicillin-binding protein activator LpoA XM56_02395 IPR028082 Periplasmic binding protein-like I XM56_02395 IPR011990 Tetratricopeptide-like helical domain superfamily XM56_02400 IPR014776 Tetrapyrrole methylase, subdomain 2 XM56_02400 IPR014777 Tetrapyrrole methylase, subdomain 1 XM56_02400 IPR008189 rRNA small subunit methyltransferase I XM56_02400 IPR018063 SAM-dependent methyltransferase RsmI, conserved site XM56_02400 IPR000878 Tetrapyrrole methylase XM56_02400 IPR035996 Tetrapyrrole methylase superfamily XM56_02415 IPR016147 Pili assembly chaperone, N-terminal XM56_02415 IPR016148 Pili assembly chaperone, C-terminal XM56_02415 IPR001829 Pili assembly chaperone, bacterial XM56_02415 IPR036316 Pili assembly chaperone, C-terminal domain superfamily XM56_02415 IPR008962 PapD-like superfamily XM56_02415 IPR013783 Immunoglobulin-like fold XM56_02415 IPR018046 Pili assembly chaperone, conserved site XM56_02420 IPR025949 PapC-like, C-terminal domain XM56_02420 IPR018030 Fimbrial membrane usher, conserved site XM56_02420 IPR000015 Outer membrane usher protein XM56_02420 IPR025885 PapC, N-terminal domain XM56_02420 IPR037224 PapC, N-terminal domain superfamily XM56_02420 IPR042186 Outer membrane usher protein FimD, plug domain XM56_02430 IPR036390 Winged helix DNA-binding domain superfamily XM56_02430 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_02430 IPR000847 Transcription regulator HTH, LysR XM56_02430 IPR005119 LysR, substrate-binding XM56_02435 IPR020471 Aldo/keto reductase XM56_02435 IPR036812 NADP-dependent oxidoreductase domain superfamily XM56_02435 IPR023210 NADP-dependent oxidoreductase domain XM56_02440 IPR020843 Polyketide synthase, enoylreductase domain XM56_02440 IPR011032 GroES-like superfamily XM56_02440 IPR013149 Alcohol dehydrogenase, C-terminal XM56_02440 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site XM56_02440 IPR013154 Alcohol dehydrogenase, N-terminal XM56_02440 IPR036291 NAD(P)-binding domain superfamily XM56_02445 IPR003829 Pirin, N-terminal domain XM56_02445 IPR014710 RmlC-like jelly roll fold XM56_02445 IPR011051 RmlC-like cupin domain superfamily XM56_02445 IPR012093 Pirin XM56_02445 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain XM56_02450 IPR000847 Transcription regulator HTH, LysR XM56_02450 IPR005119 LysR, substrate-binding XM56_02450 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_02450 IPR036390 Winged helix DNA-binding domain superfamily XM56_02455 IPR040079 Glutathione Transferase family XM56_02455 IPR004045 Glutathione S-transferase, N-terminal XM56_02455 IPR010987 Glutathione S-transferase, C-terminal-like XM56_02455 IPR036282 Glutathione S-transferase, C-terminal domain superfamily XM56_02455 IPR016639 Glutathione S-transferase Omega/GSH XM56_02455 IPR036249 Thioredoxin-like superfamily XM56_02460 IPR032808 DoxX family XM56_02465 IPR025612 YqjK-like protein XM56_02470 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III XM56_02475 IPR010279 Inner membrane protein YqjD/ElaB XM56_02485 IPR027398 SecD export protein N-terminal TM domain XM56_02485 IPR026574 Modulator protein MzrA XM56_02490 IPR032818 DedA family XM56_02490 IPR032816 SNARE associated Golgi protein XM56_02500 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_02500 IPR000524 Transcription regulator HTH, GntR XM56_02500 IPR008920 Transcription regulator FadR/GntR, C-terminal XM56_02500 IPR011711 GntR, C-terminal XM56_02500 IPR036390 Winged helix DNA-binding domain superfamily XM56_02505 IPR020846 Major facilitator superfamily domain XM56_02505 IPR036259 MFS transporter superfamily XM56_02505 IPR011701 Major facilitator superfamily XM56_02510 IPR003766 Uronate isomerase XM56_02510 IPR032466 Metal-dependent hydrolase XM56_02515 IPR013131 Mannitol dehydrogenase, N-terminal XM56_02515 IPR036291 NAD(P)-binding domain superfamily XM56_02515 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily XM56_02515 IPR013328 6-phosphogluconate dehydrogenase, domain 2 XM56_02515 IPR023668 Altronate oxidoreductase XM56_02515 IPR013118 Mannitol dehydrogenase, C-terminal XM56_02520 IPR013974 SAF domain XM56_02520 IPR007392 D-galactarate/Altronate dehydratase, C-terminal XM56_02525 IPR019629 Uncharacterised protein family HI1736/YgjV XM56_02525 IPR026267 Inner membrane protein YgjV XM56_02530 IPR001991 Sodium:dicarboxylate symporter XM56_02530 IPR036458 Sodium:dicarboxylate symporter superfamily XM56_02530 IPR023025 Serine/threonine transporter SstT XM56_02535 IPR022369 Integral membrane protein TerC, riboswitch-linked XM56_02535 IPR005496 Integral membrane protein TerC XM56_02545 IPR036291 NAD(P)-binding domain superfamily XM56_02545 IPR000683 Oxidoreductase, N-terminal XM56_02550 IPR002725 Protein of unknown function DUF45 XM56_02565 IPR005546 Autotransporter beta-domain XM56_02565 IPR006315 Outer membrane autotransporter barrel XM56_02565 IPR036709 Autotransporter beta-domain superfamily XM56_02565 IPR011050 Pectin lyase fold/virulence factor XM56_02570 IPR007848 Methyltransferase small domain XM56_02570 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD XM56_02570 IPR002052 DNA methylase, N-6 adenine-specific, conserved site XM56_02570 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XM56_02580 IPR023753 FAD/NAD(P)-binding domain XM56_02580 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal XM56_02580 IPR013785 Aldolase-type TIM barrel XM56_02580 IPR036188 FAD/NAD(P)-binding domain superfamily XM56_02585 IPR000620 EamA domain XM56_02590 IPR005325 Protein of unknown function DUF308, membrane XM56_02600 IPR015424 Pyridoxal phosphate-dependent transferase XM56_02600 IPR002129 Pyridoxal phosphate-dependent decarboxylase XM56_02600 IPR010107 Glutamate decarboxylase XM56_02600 IPR021115 Pyridoxal-phosphate binding site XM56_02600 IPR015421 Pyridoxal phosphate-dependent transferase, major domain XM56_02605 IPR002293 Amino acid/polyamine transporter I XM56_02610 IPR012338 Beta-lactamase/transpeptidase-like XM56_02610 IPR015868 Glutaminase XM56_02615 IPR003352 Phosphotransferase system, EIIC XM56_02615 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site XM56_02615 IPR036878 Glucose permease domain IIB XM56_02615 IPR013013 Phosphotransferase system, EIIC component, type 1 XM56_02615 IPR001996 Phosphotransferase system, IIB component, type 1 XM56_02620 IPR000408 Regulator of chromosome condensation, RCC1 XM56_02620 IPR040190 N-acetylmuramic acid 6-phosphate etherase/glucokinase regulatory protein XM56_02620 IPR001347 Sugar isomerase (SIS) XM56_02620 IPR005486 Glucokinase regulatory protein, conserved site XM56_02620 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ XM56_02625 IPR009057 Homeobox-like domain superfamily XM56_02625 IPR001347 Sugar isomerase (SIS) XM56_02625 IPR035472 RpiR-like, SIS domain XM56_02625 IPR022821 Transcription regulator HTH, MurR XM56_02625 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_02625 IPR000281 Helix-turn-helix protein RpiR XM56_02630 IPR017853 Glycoside hydrolase superfamily XM56_02630 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily XM56_02630 IPR019800 Glycoside hydrolase, family 3, active site XM56_02630 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily XM56_02630 IPR002772 Glycoside hydrolase family 3 C-terminal domain XM56_02630 IPR001764 Glycoside hydrolase, family 3, N-terminal XM56_02640 IPR008302 Uncharacterised conserved protein UCP016719 XM56_02655 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_02655 IPR014284 RNA polymerase sigma-70 like domain XM56_02655 IPR000943 RNA polymerase sigma-70 XM56_02655 IPR009042 RNA polymerase sigma-70 region 1.2 XM56_02655 IPR042189 Sigma-70 factor, region 1.1 superfamily XM56_02655 IPR013325 RNA polymerase sigma factor, region 2 XM56_02655 IPR013324 RNA polymerase sigma factor, region 3/4-like XM56_02655 IPR007127 RNA polymerase sigma factor 70, region 1.1 XM56_02655 IPR007624 RNA polymerase sigma-70 region 3 XM56_02655 IPR007630 RNA polymerase sigma-70 region 4 XM56_02655 IPR007627 RNA polymerase sigma-70 region 2 XM56_02655 IPR012760 RNA polymerase sigma factor RpoD, C-terminal XM56_02655 IPR028630 RNA polymerase sigma factor RpoD XM56_02655 IPR007631 RNA polymerase sigma factor 70, non-essential domain XM56_02660 IPR030846 DNA primase DnaG, bacteria XM56_02660 IPR013264 DNA primase, catalytic core, N-terminal XM56_02660 IPR002694 Zinc finger, CHC2-type XM56_02660 IPR006171 TOPRIM domain XM56_02660 IPR034151 Bacterial DnaG primase, TOPRIM domain XM56_02660 IPR036977 DNA Primase, CHC2-type zinc finger XM56_02660 IPR019475 DNA primase, DnaB-helicase binding domain XM56_02660 IPR006295 DNA primase, DnaG XM56_02660 IPR013173 DNA primase DnaG, DnaB-binding domain XM56_02660 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal XM56_02660 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily XM56_02665 IPR001911 Ribosomal protein S21 XM56_02665 IPR018278 Ribosomal protein S21, conserved site XM56_02665 IPR038380 Ribosomal protein S21 superfamily XM56_02670 IPR017861 Kae1/TsaD family XM56_02670 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD XM56_02670 IPR017860 Peptidase M22, conserved site XM56_02670 IPR000905 Gcp-like domain XM56_02675 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY XM56_02680 IPR006156 Dihydroneopterin aldolase XM56_02680 IPR006157 Dihydroneopterin aldolase/epimerase domain XM56_02685 IPR003824 Undecaprenyl-diphosphatase UppP XM56_02690 IPR012006 tRNA nucleotidyltransferase, proteobacteria XM56_02690 IPR003607 HD/PDEase domain XM56_02690 IPR006674 HD domain XM56_02690 IPR002646 Poly A polymerase, head domain XM56_02690 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain XM56_02695 IPR016476 SH3 domain protein XM56_02695 IPR003646 SH3-like domain, bacterial-type XM56_02700 IPR007899 CHAD domain XM56_02700 IPR039013 Inorganic triphosphatase YgiF XM56_02700 IPR023577 CYTH domain XM56_02700 IPR033469 CYTH-like domain superfamily XM56_02705 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase XM56_02705 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain XM56_02705 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme XM56_02710 IPR004821 Cytidyltransferase-like domain XM56_02710 IPR029056 Ribokinase-like XM56_02710 IPR011611 Carbohydrate kinase PfkB XM56_02710 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XM56_02710 IPR011913 RfaE bifunctional protein, domain I XM56_02710 IPR011914 RfaE bifunctional protein, domain II XM56_02710 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site XM56_02710 IPR023030 Bifunctional protein HldE XM56_02715 IPR002293 Amino acid/polyamine transporter I XM56_02720 IPR007475 Ubiquinone biosynthesis accessory factor UbiK XM56_02725 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily XM56_02725 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB XM56_02730 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B XM56_02730 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type XM56_02735 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain XM56_02735 IPR016185 Pre-ATP-grasp domain superfamily XM56_02740 IPR009576 Biofilm formation YgiB XM56_02745 IPR010130 Type I secretion outer membrane protein, TolC XM56_02745 IPR003423 Outer membrane efflux protein XM56_02750 IPR020084 NUDIX hydrolase, conserved site XM56_02750 IPR004385 Nucleoside diphosphate pyrophosphatase XM56_02750 IPR015797 NUDIX hydrolase-like domain superfamily XM56_02750 IPR000086 NUDIX hydrolase domain XM56_02755 IPR009659 Protein of unknown function DUF1249 XM56_02760 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA XM56_02760 IPR029052 Metallo-dependent phosphatase-like XM56_02760 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type XM56_02765 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA XM56_02765 IPR029058 Alpha/Beta hydrolase fold XM56_02770 IPR002288 DNA gyrase B subunit, C-terminal XM56_02770 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative XM56_02770 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XM56_02770 IPR006171 TOPRIM domain XM56_02770 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 XM56_02770 IPR003594 Histidine kinase/HSP90-like ATPase XM56_02770 IPR013760 DNA topoisomerase, type IIA-like domain superfamily XM56_02770 IPR001241 DNA topoisomerase, type IIA XM56_02770 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal XM56_02770 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup XM56_02770 IPR018522 DNA topoisomerase, type IIA, conserved site XM56_02770 IPR020568 Ribosomal protein S5 domain 2-type fold XM56_02775 IPR005119 LysR, substrate-binding XM56_02775 IPR000847 Transcription regulator HTH, LysR XM56_02775 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_02775 IPR036390 Winged helix DNA-binding domain superfamily XM56_02780 IPR011008 Dimeric alpha-beta barrel XM56_02780 IPR007138 Antibiotic biosynthesis monooxygenase domain XM56_02785 IPR029039 Flavoprotein-like superfamily XM56_02785 IPR003680 Flavodoxin-like fold XM56_02790 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal XM56_02790 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative XM56_02790 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily XM56_02790 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta XM56_02790 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal XM56_02790 IPR013760 DNA topoisomerase, type IIA-like domain superfamily XM56_02790 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat XM56_02795 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase XM56_02795 IPR002123 Phospholipid/glycerol acyltransferase XM56_02800 IPR008972 Cupredoxin XM56_02800 IPR011706 Multicopper oxidase, type 2 XM56_02800 IPR026589 Cell division protein FtsP XM56_02800 IPR006311 Twin-arginine translocation pathway, signal sequence XM56_02800 IPR011707 Multicopper oxidase, type 3 XM56_02805 IPR024560 Uncharacterised protein family UPF0313, C-terminal XM56_02805 IPR007197 Radical SAM XM56_02805 IPR023404 Radical SAM, alpha/beta horseshoe XM56_02805 IPR013704 Uncharacterised protein family UPF0313, N-terminal XM56_02805 IPR022946 Uncharacterised protein family UPF0313 XM56_02805 IPR020612 Methylthiotransferase, conserved site XM56_02805 IPR006638 Elp3/MiaB/NifB XM56_02810 IPR023210 NADP-dependent oxidoreductase domain XM56_02810 IPR036812 NADP-dependent oxidoreductase domain superfamily XM56_02810 IPR018170 Aldo/keto reductase, conserved site XM56_02810 IPR020471 Aldo/keto reductase XM56_02815 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA XM56_02815 IPR018211 Alcohol dehydrogenase, iron-type, conserved site XM56_02820 IPR009594 Transcription regulator HTH, AraC, N-terminal XM56_02820 IPR009057 Homeobox-like domain superfamily XM56_02820 IPR018060 DNA binding HTH domain, AraC-type XM56_02825 IPR032816 SNARE associated Golgi protein XM56_02825 IPR032818 DedA family XM56_02830 IPR015421 Pyridoxal phosphate-dependent transferase, major domain XM56_02830 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme XM56_02830 IPR015424 Pyridoxal phosphate-dependent transferase XM56_02830 IPR006233 Cystathionine beta-lyase, bacterial XM56_02830 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 XM56_02835 IPR014164 TonB-system energizer ExbB type-1 XM56_02835 IPR002898 MotA/TolQ/ExbB proton channel XM56_02840 IPR014170 TonB system transport protein ExbD type-1 XM56_02840 IPR003400 Biopolymer transport protein ExbD/TolR XM56_02875 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_02875 IPR022399 Helicase/secretion neighbourhood ATPase XM56_02875 IPR001482 Type II/IV secretion system protein XM56_02890 IPR032789 Pilus formation protein, N-terminal XM56_02890 IPR004846 Type II/III secretion system XM56_02890 IPR014004 Transport-associated and nodulation domain, bacteria XM56_02890 IPR007055 BON domain XM56_02890 IPR001775 GspD/PilQ family XM56_02915 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily XM56_02915 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like XM56_02915 IPR005123 Oxoglutarate/iron-dependent dioxygenase XM56_02915 IPR004574 Alkylated DNA repair protein AlkB XM56_02920 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XM56_02920 IPR001036 Acriflavin resistance protein XM56_02920 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA XM56_02925 IPR036590 SOS response associated peptidase-like XM56_02925 IPR003738 SOS response associated peptidase (SRAP) XM56_02935 IPR018060 DNA binding HTH domain, AraC-type XM56_02935 IPR009057 Homeobox-like domain superfamily XM56_02935 IPR020449 Transcription regulator HTH, AraC- type XM56_02935 IPR018062 HTH domain AraC-type, conserved site XM56_02960 IPR017911 ABC transporter, macrolide export, ATP-binding domain XM56_02960 IPR017871 ABC transporter, conserved site XM56_02960 IPR003439 ABC transporter-like XM56_02960 IPR003838 ABC transporter permease protein domain XM56_02960 IPR003593 AAA+ ATPase domain XM56_02960 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_02960 IPR025857 MacB-like periplasmic core domain XM56_02965 IPR018060 DNA binding HTH domain, AraC-type XM56_02965 IPR020449 Transcription regulator HTH, AraC- type XM56_02965 IPR009057 Homeobox-like domain superfamily XM56_02965 IPR018062 HTH domain AraC-type, conserved site XM56_02975 IPR001584 Integrase, catalytic core XM56_02975 IPR012337 Ribonuclease H-like superfamily XM56_02975 IPR036397 Ribonuclease H superfamily XM56_02975 IPR025948 HTH-like domain XM56_02985 IPR014756 Immunoglobulin E-set XM56_02985 IPR029058 Alpha/Beta hydrolase fold XM56_02985 IPR021764 Enterochelin esterase, N-terminal XM56_02985 IPR000801 Putative esterase XM56_02985 IPR013783 Immunoglobulin-like fold XM56_02990 IPR003593 AAA+ ATPase domain XM56_02990 IPR003439 ABC transporter-like XM56_02990 IPR017871 ABC transporter, conserved site XM56_02990 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_02995 IPR000522 ABC transporter, permease protein, BtuC-like XM56_02995 IPR037294 ABC transporter, BtuC-like XM56_03000 IPR000522 ABC transporter, permease protein, BtuC-like XM56_03000 IPR037294 ABC transporter, BtuC-like XM56_03005 IPR002491 ABC transporter periplasmic binding domain XM56_03010 IPR036259 MFS transporter superfamily XM56_03010 IPR020846 Major facilitator superfamily domain XM56_03010 IPR011701 Major facilitator superfamily XM56_03015 IPR036291 NAD(P)-binding domain superfamily XM56_03015 IPR001509 NAD-dependent epimerase/dehydratase XM56_03020 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site XM56_03020 IPR004090 Chemotaxis methyl-accepting receptor XM56_03020 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily XM56_03020 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain XM56_03020 IPR003660 HAMP domain XM56_03020 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding XM56_03030 IPR001712 Type III secretion system FHIPEP XM56_03030 IPR006301 Flagellar biosynthesis protein FlhA XM56_03030 IPR042196 FHIPEP, domain 4 XM56_03030 IPR025505 FHIPEP conserved site XM56_03030 IPR042193 FHIPEP, domain 3 XM56_03030 IPR042194 FHIPEP, domain 1 XM56_03035 IPR029025 Type III secretion system substrate exporter, C-terminal XM56_03035 IPR006135 Type III secretion system substrate exporter XM56_03035 IPR006136 Flagellar biosynthetic protein FlhB XM56_03040 IPR006303 Flagellar biosynthesis protein FliR XM56_03040 IPR002010 Type III secretion system inner membrane R protein XM56_03045 IPR006305 Flagellar biosynthesis protein FliQ XM56_03045 IPR002191 Bacterial export protein family 3 XM56_03050 IPR005838 Type III secretion system inner membrane P protein XM56_03050 IPR005837 Flagellar transport protein FliP XM56_03055 IPR012826 Flagellar motor switch FliN XM56_03055 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb XM56_03055 IPR036429 SpoA-like superfamily XM56_03055 IPR001543 Surface presentation of antigen (SpoA) XM56_03065 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_03065 IPR001789 Signal transduction response regulator, receiver domain XM56_03065 IPR003593 AAA+ ATPase domain XM56_03065 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 XM56_03065 IPR025944 Sigma-54 interaction domain, conserved site XM56_03065 IPR002078 RNA polymerase sigma factor 54 interaction domain XM56_03065 IPR002197 DNA binding HTH domain, Fis-type XM56_03065 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 XM56_03065 IPR009057 Homeobox-like domain superfamily XM56_03065 IPR011006 CheY-like superfamily XM56_03070 IPR001624 Flagellar hook-basal body complex protein FliE XM56_03075 IPR013556 Flagellar M-ring C-terminal XM56_03075 IPR000067 Flagellar M-ring protein FliF XM56_03075 IPR006182 Secretory protein YscJ/FliF XM56_03090 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain XM56_03090 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site XM56_03090 IPR003593 AAA+ ATPase domain XM56_03090 IPR040627 T3SS EscN ATPase, C-terminal XM56_03090 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_03090 IPR020005 Flagellar export ATPase FliI, clade 1 XM56_03090 IPR005714 ATPase, type III secretion system, FliI/YscN XM56_03090 IPR032463 ATPase, type III secretion system, FliI XM56_03120 IPR019776 Flagellar basal body rod protein, conserved site XM56_03120 IPR006300 Flagellar basal-body rod protein FlgB XM56_03120 IPR001444 Flagellar basal body rod protein, N-terminal XM56_03125 IPR006299 Flagellar basal-body rod protein FlgC XM56_03125 IPR001444 Flagellar basal body rod protein, N-terminal XM56_03125 IPR010930 Flagellar basal-body/hook protein, C-terminal domain XM56_03125 IPR019776 Flagellar basal body rod protein, conserved site XM56_03130 IPR025963 FlgD Tudor-like domain XM56_03130 IPR025965 FlgD Ig-like domain XM56_03130 IPR005648 Flagellar hook capping protein XM56_03135 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like XM56_03135 IPR010930 Flagellar basal-body/hook protein, C-terminal domain XM56_03135 IPR019776 Flagellar basal body rod protein, conserved site XM56_03135 IPR020013 Flagellar hook-basal body protein, FlgE/F/G XM56_03135 IPR037058 Flagellar hook protein FlgE superfamily XM56_03135 IPR011491 Flagellar hook protein FlgE XM56_03135 IPR001444 Flagellar basal body rod protein, N-terminal XM56_03140 IPR010930 Flagellar basal-body/hook protein, C-terminal domain XM56_03140 IPR001444 Flagellar basal body rod protein, N-terminal XM56_03140 IPR019776 Flagellar basal body rod protein, conserved site XM56_03140 IPR020013 Flagellar hook-basal body protein, FlgE/F/G XM56_03140 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like XM56_03145 IPR001444 Flagellar basal body rod protein, N-terminal XM56_03145 IPR010930 Flagellar basal-body/hook protein, C-terminal domain XM56_03145 IPR020013 Flagellar hook-basal body protein, FlgE/F/G XM56_03145 IPR012834 Flagellar basal-body rod FlgG XM56_03145 IPR019776 Flagellar basal body rod protein, conserved site XM56_03145 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like XM56_03150 IPR000527 Flagellar L-ring protein XM56_03155 IPR001782 Flagellar P-ring protein XM56_03185 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_03185 IPR039420 Transcriptional regulatory protein WalR-like XM56_03185 IPR011990 Tetratricopeptide-like helical domain superfamily XM56_03185 IPR016032 Signal transduction response regulator, C-terminal effector XM56_03185 IPR001867 OmpR/PhoB-type DNA-binding domain XM56_03185 IPR040970 CadC C-terminal domain 1 XM56_03190 IPR001492 Flagellin XM56_03190 IPR042187 Flagellin, C-terminal domain, subdomain 2 XM56_03190 IPR001029 Flagellin, D0/D1 domain XM56_03195 IPR010810 Flagellin hook, IN motif XM56_03195 IPR010809 Flagellar hook-associated protein 2, C-terminal XM56_03195 IPR040026 Flagellar hook-associated protein 2 XM56_03195 IPR003481 Flagellar hook-associated protein 2, N-terminal XM56_03200 IPR036584 Flagellar protein FliS superfamily XM56_03200 IPR003713 Flagellar protein FliS XM56_03220 IPR007630 RNA polymerase sigma-70 region 4 XM56_03220 IPR000943 RNA polymerase sigma-70 XM56_03220 IPR014284 RNA polymerase sigma-70 like domain XM56_03220 IPR013324 RNA polymerase sigma factor, region 3/4-like XM56_03220 IPR013325 RNA polymerase sigma factor, region 2 XM56_03220 IPR007627 RNA polymerase sigma-70 region 2 XM56_03220 IPR012845 RNA polymerase sigma factor, FliA/WhiG XM56_03225 IPR002898 MotA/TolQ/ExbB proton channel XM56_03225 IPR000540 Flagellar motor protein MotA, conserved site XM56_03225 IPR022522 Flagellar motor stator, MotA XM56_03230 IPR036737 OmpA-like domain superfamily XM56_03230 IPR025713 Motility protein B, N-terminal domain XM56_03230 IPR006665 OmpA-like domain XM56_03235 IPR008816 Glycine zipper 2TM domain XM56_03240 IPR027394 Cytochrome-c3 hydrogenase, C-terminal XM56_03240 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit XM56_03240 IPR006311 Twin-arginine translocation pathway, signal sequence XM56_03240 IPR037148 [NiFe]-hydrogenase, small subunit, C-terminal domain superfamily XM56_03240 IPR001821 [NiFe]-hydrogenase, small subunit XM56_03240 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily XM56_03240 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal XM56_03245 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site XM56_03245 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain XM56_03245 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal XM56_03250 IPR005614 NrfD family XM56_03255 IPR001501 Nickel-dependent hydrogenase, large subunit XM56_03255 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site XM56_03255 IPR029014 [NiFe]-hydrogenase, large subunit XM56_03260 IPR004419 Peptidase A31, hydrogenase expression/formation protein XM56_03260 IPR023430 Peptidase HybD-like domain superfamily XM56_03260 IPR000671 Peptidase A31 family XM56_03265 IPR038530 [NiFe]-hydrogenase assembly, chaperone, HybE superfamily XM56_03265 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE XM56_03270 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site XM56_03270 IPR000688 Hydrogenase maturation factor HypA/HybF XM56_03270 IPR039002 Hydrogenase maturation factor HybF XM56_03275 IPR004392 Hydrogenase maturation factor HypB XM56_03275 IPR003495 CobW/HypB/UreG, nucleotide-binding domain XM56_03275 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_03280 IPR019812 Hydrogenase assembly chaperone, conserved site XM56_03280 IPR037254 HupF/HypC superfamily XM56_03280 IPR001109 Hydrogenase expression/formation protein, HupF/HypC XM56_03285 IPR042244 HypD, domain 1 XM56_03285 IPR042243 HypD, domain 2 XM56_03285 IPR002780 Hydrogenase formation HypD protein XM56_03290 IPR036921 PurM-like, N-terminal domain superfamily XM56_03290 IPR036676 PurM-like, C-terminal domain superfamily XM56_03290 IPR010918 PurM-like, C-terminal domain XM56_03290 IPR011854 Carbamoyl dehydratase HypE XM56_03290 IPR016188 PurM-like, N-terminal domain XM56_03295 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily XM56_03295 IPR004421 Carbamoyltransferase, HypF-type XM56_03295 IPR017968 Acylphosphatase, conserved site XM56_03295 IPR036046 Acylphosphatase-like domain superfamily XM56_03295 IPR006070 YrdC-like domain XM56_03295 IPR001792 Acylphosphatase-like domain XM56_03295 IPR011125 Zinc finger, HypF-type XM56_03295 IPR041440 HypF, Kae1-like domain XM56_03300 IPR003812 Fido domain XM56_03300 IPR025758 Fic/DOC N-terminal XM56_03300 IPR036597 Fido-like domain superfamily XM56_03300 IPR040198 Fido domain-containing protein XM56_03300 IPR026287 Protein adenylyltransferase SoFic-like XM56_03305 IPR000417 Hydroxyethylthiazole kinase XM56_03305 IPR029056 Ribokinase-like XM56_03315 IPR000700 PAS-associated, C-terminal XM56_03315 IPR035919 EAL domain superfamily XM56_03315 IPR013655 PAS fold-3 XM56_03315 IPR000160 GGDEF domain XM56_03315 IPR029787 Nucleotide cyclase XM56_03315 IPR001610 PAC motif XM56_03315 IPR000014 PAS domain XM56_03315 IPR013656 PAS fold-4 XM56_03315 IPR001633 EAL domain XM56_03315 IPR035965 PAS domain superfamily XM56_03320 IPR022824 Multidrug resistance protein MdtA XM56_03320 IPR006143 RND efflux pump, membrane fusion protein XM56_03320 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain XM56_03325 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 XM56_03325 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XM56_03325 IPR001036 Acriflavin resistance protein XM56_03335 IPR036259 MFS transporter superfamily XM56_03335 IPR004736 MFS transporter, metabolite:H symporter XM56_03335 IPR005829 Sugar transporter, conserved site XM56_03335 IPR005828 Major facilitator, sugar transporter-like XM56_03335 IPR015041 Osmosensory transporter coiled coil XM56_03335 IPR036292 Proline/betaine transporter ProP, C-terminal XM56_03335 IPR020846 Major facilitator superfamily domain XM56_03350 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein XM56_03350 IPR003841 Sodium-dependent phosphate transport protein XM56_03355 IPR022976 Non-specific ribonucleoside hydrolase RihC XM56_03355 IPR036452 Ribonucleoside hydrolase-like XM56_03355 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain XM56_03355 IPR023186 Inosine/uridine-preferring nucleoside hydrolase XM56_03360 IPR010982 Lambda repressor-like, DNA-binding domain superfamily XM56_03360 IPR000843 LacI-type HTH domain XM56_03360 IPR028082 Periplasmic binding protein-like I XM56_03365 IPR011701 Major facilitator superfamily XM56_03365 IPR004736 MFS transporter, metabolite:H symporter XM56_03365 IPR036259 MFS transporter superfamily XM56_03365 IPR005828 Major facilitator, sugar transporter-like XM56_03365 IPR020846 Major facilitator superfamily domain XM56_03380 IPR000620 EamA domain XM56_03395 IPR002491 ABC transporter periplasmic binding domain XM56_03395 IPR033870 FatB domain XM56_03400 IPR037294 ABC transporter, BtuC-like XM56_03400 IPR000522 ABC transporter, permease protein, BtuC-like XM56_03405 IPR037294 ABC transporter, BtuC-like XM56_03405 IPR000522 ABC transporter, permease protein, BtuC-like XM56_03410 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_03410 IPR017871 ABC transporter, conserved site XM56_03410 IPR003593 AAA+ ATPase domain XM56_03410 IPR003439 ABC transporter-like XM56_03415 IPR001714 Peptidase M24, methionine aminopeptidase XM56_03415 IPR000994 Peptidase M24 XM56_03415 IPR036005 Creatinase/aminopeptidase-like XM56_03415 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 XM56_03435 IPR005694 Efflux pump membrane protein XM56_03435 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain XM56_03435 IPR030196 Multidrug resistance protein MdtN XM56_03440 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein XM56_03450 IPR011006 CheY-like superfamily XM56_03450 IPR011193 Ornithine/lysine/arginine decarboxylase XM56_03450 IPR015421 Pyridoxal phosphate-dependent transferase, major domain XM56_03450 IPR027464 Ornithine decarboxylase, N-terminal XM56_03450 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal XM56_03450 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily XM56_03450 IPR027568 Ornithine decarboxylase SpeF XM56_03450 IPR015424 Pyridoxal phosphate-dependent transferase XM56_03450 IPR000310 Orn/Lys/Arg decarboxylase, major domain XM56_03450 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 XM56_03450 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal XM56_03455 IPR002293 Amino acid/polyamine transporter I XM56_03455 IPR027566 Putrescine transporter PotE XM56_03455 IPR004754 Amino acid antiporter XM56_03470 IPR005063 Transposase, IS1 XM56_03475 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain XM56_03475 IPR003220 InsA N-terminal domain XM56_03495 IPR011010 DNA breaking-rejoining enzyme, catalytic core XM56_03495 IPR013762 Integrase-like, catalytic domain superfamily XM56_03495 IPR010998 Integrase/recombinase, N-terminal XM56_03495 IPR002104 Integrase, catalytic domain XM56_03510 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 XM56_03510 IPR015421 Pyridoxal phosphate-dependent transferase, major domain XM56_03510 IPR015424 Pyridoxal phosphate-dependent transferase XM56_03510 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily XM56_03510 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal XM56_03510 IPR027464 Ornithine decarboxylase, N-terminal XM56_03510 IPR000310 Orn/Lys/Arg decarboxylase, major domain XM56_03510 IPR011193 Ornithine/lysine/arginine decarboxylase XM56_03510 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal XM56_03510 IPR011006 CheY-like superfamily XM56_03520 IPR023346 Lysozyme-like domain superfamily XM56_03520 IPR023664 Murein transglycosylase-C XM56_03520 IPR008258 Transglycosylase SLT domain 1 XM56_03520 IPR000189 Prokaryotic transglycosylase, active site XM56_03520 IPR024570 Murein transglycosylase-C, N-terminal XM56_03525 IPR036766 Fe(II) trafficking protein YggX superfamily XM56_03525 IPR007457 Fe(II) trafficking protein YggX XM56_03530 IPR004035 Endonuclease III, iron-sulphur binding site XM56_03530 IPR003265 HhH-GPD domain XM56_03530 IPR000445 Helix-hairpin-helix motif XM56_03530 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif XM56_03530 IPR005760 A/G-specific adenine glycosylase MutY XM56_03530 IPR015797 NUDIX hydrolase-like domain superfamily XM56_03530 IPR029119 MutY, C-terminal XM56_03530 IPR011257 DNA glycosylase XM56_03530 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal XM56_03530 IPR004036 Endonuclease III-like, conserved site-2 XM56_03535 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type XM56_03535 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XM56_03540 IPR007416 Protein of unknown function DUF469 XM56_03545 IPR012338 Beta-lactamase/transpeptidase-like XM56_03545 IPR015868 Glutaminase XM56_03550 IPR021307 Protein of unknown function DUF2884 XM56_03555 IPR010723 HemN, C-terminal XM56_03555 IPR007197 Radical SAM XM56_03555 IPR004559 Heme chaperone HemW-like XM56_03555 IPR023404 Radical SAM, alpha/beta horseshoe XM56_03555 IPR006638 Elp3/MiaB/NifB XM56_03555 IPR034505 Anaerobic coproporphyrinogen-III oxidase XM56_03560 IPR029001 Inosine triphosphate pyrophosphatase-like XM56_03560 IPR002637 Ham1-like protein XM56_03560 IPR020922 dITP/XTP pyrophosphatase XM56_03565 IPR036591 YggU-like superfamily XM56_03565 IPR003746 Protein of unknown function DUF167 XM56_03565 IPR005228 Conserved hypothetical protein CHP00251 XM56_03570 IPR003425 CCB3/YggT XM56_03575 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal XM56_03575 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain XM56_03575 IPR036291 NAD(P)-binding domain superfamily XM56_03575 IPR000304 Pyrroline-5-carboxylate reductase XM56_03575 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily XM56_03580 IPR011078 Pyridoxal phosphate homeostasis protein XM56_03580 IPR029066 PLP-binding barrel XM56_03580 IPR001608 Alanine racemase, N-terminal XM56_03585 IPR001482 Type II/IV secretion system protein XM56_03585 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_03585 IPR006321 Pilus retraction protein PilT XM56_03585 IPR003593 AAA+ ATPase domain XM56_03590 IPR017754 Agmatine deiminase XM56_03590 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type XM56_03595 IPR023719 Aliphatic amidase XM56_03595 IPR036526 Carbon-nitrogen hydrolase superfamily XM56_03595 IPR003010 Carbon-nitrogen hydrolase XM56_03600 IPR012337 Ribonuclease H-like superfamily XM56_03600 IPR005227 Putative pre-16S rRNA nuclease XM56_03600 IPR006641 YqgF/RNase H-like domain XM56_03600 IPR037027 YqgF/RNase H-like domain superfamily XM56_03605 IPR003774 Protein of unknown function UPF0301 XM56_03610 IPR004218 Prokaryotic glutathione synthetase, ATP-binding XM56_03610 IPR004215 Prokaryotic glutathione synthetase, N-terminal XM56_03610 IPR016185 Pre-ATP-grasp domain superfamily XM56_03610 IPR006284 Glutathione synthetase, prokaryotic XM56_03610 IPR011761 ATP-grasp fold XM56_03610 IPR013815 ATP-grasp fold, subdomain 1 XM56_03615 IPR015947 PUA-like superfamily XM56_03615 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal XM56_03615 IPR029028 Alpha/beta knot methyltransferases XM56_03615 IPR006700 Ribosomal RNA small subunit methyltransferase E XM56_03620 IPR007346 Endonuclease I XM56_03625 IPR023483 Uncharacterised protein family SprT XM56_03625 IPR006640 SprT-like XM56_03625 IPR035240 SprT-like, zinc ribbon domain XM56_03630 IPR001845 HTH ArsR-type DNA-binding domain XM56_03630 IPR011991 ArsR-like helix-turn-helix domain XM56_03630 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_03630 IPR036390 Winged helix DNA-binding domain superfamily XM56_03635 IPR007272 Sulphur transport domain XM56_03645 IPR022629 S-adenosylmethionine synthetase, central domain XM56_03645 IPR022630 S-adenosylmethionine synthetase, C-terminal XM56_03645 IPR022631 S-adenosylmethionine synthetase, conserved site XM56_03645 IPR022636 S-adenosylmethionine synthetase superfamily XM56_03645 IPR002133 S-adenosylmethionine synthetase XM56_03645 IPR022628 S-adenosylmethionine synthetase, N-terminal XM56_03650 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal XM56_03650 IPR029066 PLP-binding barrel XM56_03650 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site XM56_03650 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal XM56_03650 IPR040634 Arginine decarboxylase, helical bundle domain XM56_03650 IPR000183 Ornithine/DAP/Arg decarboxylase XM56_03650 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site XM56_03650 IPR041128 Arginine decarboxylase, C-terminal helical XM56_03650 IPR002985 Arginine decarboxylase XM56_03655 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily XM56_03655 IPR017941 Rieske [2Fe-2S] iron-sulphur domain XM56_03660 IPR001915 Peptidase M48 XM56_03665 IPR005474 Transketolase, N-terminal XM56_03665 IPR033247 Transketolase family XM56_03665 IPR033248 Transketolase, C-terminal domain XM56_03665 IPR020826 Transketolase binding site XM56_03665 IPR029061 Thiamin diphosphate-binding fold XM56_03665 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II XM56_03665 IPR005475 Transketolase-like, pyrimidine-binding domain XM56_03665 IPR005478 Transketolase, bacterial-like XM56_03670 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family XM56_03670 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site XM56_03670 IPR006422 D-erythrose-4-phosphate dehydrogenase XM56_03670 IPR036291 NAD(P)-binding domain superfamily XM56_03670 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain XM56_03670 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain XM56_03675 IPR036043 Phosphoglycerate kinase superfamily XM56_03675 IPR001576 Phosphoglycerate kinase XM56_03675 IPR015824 Phosphoglycerate kinase, N-terminal XM56_03675 IPR015911 Phosphoglycerate kinase, conserved site XM56_03680 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype XM56_03680 IPR013785 Aldolase-type TIM barrel XM56_03680 IPR000771 Fructose-bisphosphate aldolase, class-II XM56_03685 IPR000387 Tyrosine specific protein phosphatases domain XM56_03685 IPR015103 Protein-tyrosine phosphatase, YopH, N-terminal XM56_03685 IPR003546 Type III secreted modular tyrosine phosphatase, SptP/YopH XM56_03685 IPR003595 Protein-tyrosine phosphatase, catalytic XM56_03685 IPR016130 Protein-tyrosine phosphatase, active site XM56_03685 IPR029021 Protein-tyrosine phosphatase-like XM56_03685 IPR000242 PTP type protein phosphatase XM56_03685 IPR036484 Protein-tyrosine phosphatase, YopH, N-terminal domain superfamily XM56_03690 IPR008910 Conserved TM helix XM56_03690 IPR023408 Mechanosensitive ion channel MscS domain superfamily XM56_03690 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 XM56_03690 IPR006686 Mechanosensitive ion channel MscS, conserved site XM56_03690 IPR011066 Mechanosensitive ion channel MscS, C-terminal XM56_03690 IPR010920 LSM domain superfamily XM56_03690 IPR006685 Mechanosensitive ion channel MscS XM56_03700 IPR023445 Arginine exporter protein ArgO, enterobacteria XM56_03700 IPR001123 Amino acid exporter protein, LeuE-type XM56_03700 IPR004777 L-lysine exporter/arginine exporter XM56_03705 IPR007497 Protein of unknown function DUF541 XM56_03710 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria XM56_03710 IPR005119 LysR, substrate-binding XM56_03710 IPR000847 Transcription regulator HTH, LysR XM56_03710 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_03710 IPR036390 Winged helix DNA-binding domain superfamily XM56_03710 IPR017685 HTH-type transcriptional regulator ArgP XM56_03715 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup XM56_03715 IPR004788 Ribose 5-phosphate isomerase, type A XM56_03715 IPR037171 NagB/RpiA transferase-like XM56_03720 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain XM56_03720 IPR002912 ACT domain XM56_03720 IPR036291 NAD(P)-binding domain superfamily XM56_03720 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 XM56_03720 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site XM56_03720 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain XM56_03750 IPR001424 Superoxide dismutase, copper/zinc binding domain XM56_03750 IPR018152 Superoxide dismutase, copper/zinc, binding site XM56_03750 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone XM56_03750 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily XM56_03755 IPR024924 7-carboxy-7-deazaguanine synthase-like XM56_03755 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria XM56_03755 IPR013785 Aldolase-type TIM barrel XM56_03755 IPR007197 Radical SAM XM56_03780 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily XM56_03780 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family XM56_03785 IPR001433 Oxidoreductase FAD/NAD(P)-binding XM56_03785 IPR008254 Flavodoxin/nitric oxide synthase XM56_03785 IPR001094 Flavodoxin-like XM56_03785 IPR017927 FAD-binding domain, ferredoxin reductase-type XM56_03785 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain XM56_03785 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding XM56_03785 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain XM56_03785 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase XM56_03785 IPR029039 Flavoprotein-like superfamily XM56_03785 IPR017938 Riboflavin synthase-like beta-barrel XM56_03785 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria XM56_03785 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily XM56_03790 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site XM56_03790 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain XM56_03790 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily XM56_03790 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain XM56_03790 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit XM56_03795 IPR002500 Phosphoadenosine phosphosulphate reductase XM56_03795 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XM56_03795 IPR011800 Phosphoadenosine phosphosulphate reductase CysH XM56_03795 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase XM56_03810 IPR007484 Peptidase M28 XM56_03815 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site XM56_03815 IPR036291 NAD(P)-binding domain superfamily XM56_03815 IPR006366 Uroporphyrin-III C-methyltransferase XM56_03815 IPR006367 Sirohaem synthase, N-terminal XM56_03815 IPR028281 Siroheme synthase, central domain XM56_03815 IPR019478 Sirohaem synthase, dimerisation domain XM56_03815 IPR012409 Sirohaem synthase XM56_03815 IPR000878 Tetrapyrrole methylase XM56_03815 IPR035996 Tetrapyrrole methylase superfamily XM56_03815 IPR037115 Sirohaem synthase, dimerisation domain superfamily XM56_03815 IPR014776 Tetrapyrrole methylase, subdomain 2 XM56_03815 IPR014777 Tetrapyrrole methylase, subdomain 1 XM56_03820 IPR011784 Sulphate adenylyltransferase, small subunit XM56_03820 IPR002500 Phosphoadenosine phosphosulphate reductase XM56_03820 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XM56_03825 IPR031157 Tr-type G domain, conserved site XM56_03825 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal XM56_03825 IPR009000 Translation protein, beta-barrel domain superfamily XM56_03825 IPR000795 Transcription factor, GTP-binding domain XM56_03825 IPR011779 Sulphate adenylyltransferase, large subunit XM56_03825 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain XM56_03825 IPR005225 Small GTP-binding protein domain XM56_03825 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_03830 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_03830 IPR002891 Adenylyl-sulfate kinase XM56_03835 IPR022721 Protein of unknown function DUF3561 XM56_03840 IPR007060 Septum formation initiator FtsL/DivIC XM56_03840 IPR023081 Cell division protein FtsB XM56_03845 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site XM56_03845 IPR029044 Nucleotide-diphospho-sugar transferases XM56_03845 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase XM56_03845 IPR034683 Cytidylyltransferase IspD/TarI XM56_03850 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site XM56_03850 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase XM56_03850 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily XM56_03855 IPR042214 Pseudouridine synthase, TruD, catalytic domain XM56_03855 IPR011760 Pseudouridine synthase, TruD, insertion domain XM56_03855 IPR020119 Pseudouridine synthase TruD, conserved site XM56_03855 IPR001656 Pseudouridine synthase, TruD XM56_03855 IPR020103 Pseudouridine synthase, catalytic domain superfamily XM56_03860 IPR036523 SurE-like phosphatase/nucleotidase superfamily XM56_03860 IPR002828 Survival protein SurE-like phosphatase/nucleotidase XM56_03860 IPR030048 Survival protein SurE XM56_03865 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XM56_03865 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase XM56_03870 IPR016047 Peptidase M23 XM56_03870 IPR036779 LysM domain superfamily XM56_03870 IPR018392 LysM domain XM56_03870 IPR011055 Duplicated hybrid motif XM56_03875 IPR007630 RNA polymerase sigma-70 region 4 XM56_03875 IPR007627 RNA polymerase sigma-70 region 2 XM56_03875 IPR007624 RNA polymerase sigma-70 region 3 XM56_03875 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_03875 IPR012761 RNA polymerase sigma factor RpoS XM56_03875 IPR013325 RNA polymerase sigma factor, region 2 XM56_03875 IPR014284 RNA polymerase sigma-70 like domain XM56_03875 IPR000943 RNA polymerase sigma-70 XM56_03875 IPR009042 RNA polymerase sigma-70 region 1.2 XM56_03875 IPR013324 RNA polymerase sigma factor, region 3/4-like XM56_03880 IPR007695 DNA mismatch repair protein MutS-like, N-terminal XM56_03880 IPR007696 DNA mismatch repair protein MutS, core XM56_03880 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_03880 IPR036678 MutS, connector domain superfamily XM56_03880 IPR007860 DNA mismatch repair protein MutS, connector domain XM56_03880 IPR005748 DNA mismatch repair protein MutS XM56_03880 IPR007861 DNA mismatch repair protein MutS, clamp XM56_03880 IPR036187 DNA mismatch repair protein MutS, core domain superfamily XM56_03880 IPR016151 DNA mismatch repair protein MutS, N-terminal XM56_03880 IPR017261 DNA mismatch repair protein MutS/MSH XM56_03880 IPR000432 DNA mismatch repair protein MutS, C-terminal XM56_03895 IPR000259 Fimbrial-type adhesion domain XM56_03895 IPR036937 Fimbrial-type adhesion domain superfamily XM56_03895 IPR008966 Adhesion domain superfamily XM56_03900 IPR000259 Fimbrial-type adhesion domain XM56_03900 IPR036937 Fimbrial-type adhesion domain superfamily XM56_03900 IPR008966 Adhesion domain superfamily XM56_03910 IPR018046 Pili assembly chaperone, conserved site XM56_03910 IPR013783 Immunoglobulin-like fold XM56_03910 IPR008962 PapD-like superfamily XM56_03910 IPR036316 Pili assembly chaperone, C-terminal domain superfamily XM56_03910 IPR016147 Pili assembly chaperone, N-terminal XM56_03910 IPR016148 Pili assembly chaperone, C-terminal XM56_03910 IPR001829 Pili assembly chaperone, bacterial XM56_03920 IPR000259 Fimbrial-type adhesion domain XM56_03920 IPR008966 Adhesion domain superfamily XM56_03920 IPR036937 Fimbrial-type adhesion domain superfamily XM56_03925 IPR000259 Fimbrial-type adhesion domain XM56_03925 IPR036937 Fimbrial-type adhesion domain superfamily XM56_03925 IPR008966 Adhesion domain superfamily XM56_03950 IPR039421 Type I protein exporter XM56_03950 IPR003439 ABC transporter-like XM56_03950 IPR036640 ABC transporter type 1, transmembrane domain superfamily XM56_03950 IPR003593 AAA+ ATPase domain XM56_03950 IPR005074 Peptidase C39, bacteriocin processing XM56_03950 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_03950 IPR011527 ABC transporter type 1, transmembrane domain XM56_03950 IPR033838 Colicin V processing peptidase XM56_03950 IPR017871 ABC transporter, conserved site XM56_03955 IPR030190 Macrolide export protein MacA XM56_03955 IPR006143 RND efflux pump, membrane fusion protein XM56_03955 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain XM56_03960 IPR003593 AAA+ ATPase domain XM56_03960 IPR003838 ABC transporter permease protein domain XM56_03960 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_03960 IPR017871 ABC transporter, conserved site XM56_03960 IPR017911 ABC transporter, macrolide export, ATP-binding domain XM56_03960 IPR025857 MacB-like periplasmic core domain XM56_03960 IPR003439 ABC transporter-like XM56_03965 IPR003423 Outer membrane efflux protein XM56_03965 IPR010131 RND efflux system, outer membrane lipoprotein, NodT XM56_03970 IPR014030 Beta-ketoacyl synthase, N-terminal XM56_03970 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 XM56_03970 IPR000794 Beta-ketoacyl synthase XM56_03970 IPR018201 Beta-ketoacyl synthase, active site XM56_03970 IPR014031 Beta-ketoacyl synthase, C-terminal XM56_03970 IPR016039 Thiolase-like XM56_03970 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain XM56_03985 IPR036291 NAD(P)-binding domain superfamily XM56_03985 IPR020904 Short-chain dehydrogenase/reductase, conserved site XM56_03985 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase XM56_03985 IPR002347 Short-chain dehydrogenase/reductase SDR XM56_03995 IPR015424 Pyridoxal phosphate-dependent transferase XM56_03995 IPR015421 Pyridoxal phosphate-dependent transferase, major domain XM56_03995 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 XM56_03995 IPR005861 Histidinol-phosphate aminotransferase family XM56_03995 IPR004839 Aminotransferase, class I/classII XM56_04000 IPR009056 Cytochrome c-like domain XM56_04000 IPR036909 Cytochrome c-like domain superfamily XM56_04000 IPR025992 Haem-binding domain XM56_04000 IPR004852 Di-haem cytochrome c peroxidase XM56_04010 IPR031157 Tr-type G domain, conserved site XM56_04010 IPR009000 Translation protein, beta-barrel domain superfamily XM56_04010 IPR004161 Translation elongation factor EFTu-like, domain 2 XM56_04010 IPR000640 Elongation factor EFG, domain V-like XM56_04010 IPR020568 Ribosomal protein S5 domain 2-type fold XM56_04010 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup XM56_04010 IPR035649 EFG, domain V XM56_04010 IPR005225 Small GTP-binding protein domain XM56_04010 IPR035647 EF-G domain III/V-like XM56_04010 IPR000795 Transcription factor, GTP-binding domain XM56_04010 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_04010 IPR004540 Translation elongation factor EFG/EF2 XM56_04010 IPR009022 Elongation factor G, domain III XM56_04010 IPR041095 Elongation Factor G, domain II XM56_04010 IPR005517 Translation elongation factor EFG/EF2, domain IV XM56_04015 IPR011991 ArsR-like helix-turn-helix domain XM56_04015 IPR001845 HTH ArsR-type DNA-binding domain XM56_04015 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_04015 IPR036390 Winged helix DNA-binding domain superfamily XM56_04020 IPR013154 Alcohol dehydrogenase, N-terminal XM56_04020 IPR013149 Alcohol dehydrogenase, C-terminal XM56_04020 IPR011032 GroES-like superfamily XM56_04020 IPR036291 NAD(P)-binding domain superfamily XM56_04025 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component XM56_04030 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit XM56_04035 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup XM56_04035 IPR004720 Phosphotransferase system, sorbose subfamily IIB component XM56_04035 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily XM56_04040 IPR033887 PTS system mannose/sorbose specific IIA subunit XM56_04040 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily XM56_04040 IPR004701 Phosphotransferase system, mannose-type IIA component XM56_04040 IPR013789 Phosphotransferase system, mannose family IIA component XM56_04045 IPR025246 Transposase IS30-like HTH domain XM56_04045 IPR011991 ArsR-like helix-turn-helix domain XM56_04045 IPR009057 Homeobox-like domain superfamily XM56_04045 IPR007324 Sugar-binding domain, putative XM56_04045 IPR037171 NagB/RpiA transferase-like XM56_04050 IPR003010 Carbon-nitrogen hydrolase XM56_04050 IPR036526 Carbon-nitrogen hydrolase superfamily XM56_04070 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_04070 IPR003593 AAA+ ATPase domain XM56_04070 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein XM56_04070 IPR003439 ABC transporter-like XM56_04070 IPR017871 ABC transporter, conserved site XM56_04075 IPR030921 LPS export ABC transporter, ATP-binding protein LptB XM56_04075 IPR017871 ABC transporter, conserved site XM56_04075 IPR003439 ABC transporter-like XM56_04075 IPR003593 AAA+ ATPase domain XM56_04075 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_04080 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal XM56_04080 IPR001851 ABC transporter, permease XM56_04085 IPR001851 ABC transporter, permease XM56_04090 IPR028081 Leucine-binding protein domain XM56_04090 IPR028082 Periplasmic binding protein-like I XM56_04090 IPR000709 Leu/Ile/Val-binding protein XM56_04095 IPR020557 Fumarate lyase, conserved site XM56_04095 IPR011167 Iron-dependent fumarate hydratase XM56_04095 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily XM56_04095 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain XM56_04095 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain XM56_04100 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain XM56_04100 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE XM56_04100 IPR009010 Aspartate decarboxylase-like domain superfamily XM56_04100 IPR006657 Molybdopterin dinucleotide-binding domain XM56_04100 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site XM56_04100 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal XM56_04100 IPR006311 Twin-arginine translocation pathway, signal sequence XM56_04100 IPR006656 Molybdopterin oxidoreductase XM56_04100 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site XM56_04105 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain XM56_04105 IPR014297 Dimethylsulphoxide reductase, chain B XM56_04105 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site XM56_04110 IPR007059 DMSO reductase anchor subunit (DmsC) XM56_04115 IPR026269 Tat proofreading chaperone DmsD-type XM56_04115 IPR028611 Tat proofreading chaperone DmsD XM56_04115 IPR020945 DMSO/Nitrate reductase chaperone XM56_04115 IPR036411 TorD-like superfamily XM56_04125 IPR011701 Major facilitator superfamily XM56_04125 IPR020846 Major facilitator superfamily domain XM56_04125 IPR036259 MFS transporter superfamily XM56_04125 IPR023745 MSF-type transporter, YcaD XM56_04130 IPR008136 CinA, C-terminal XM56_04130 IPR036653 CinA-like, C-terminal XM56_04135 IPR003593 AAA+ ATPase domain XM56_04135 IPR013765 DNA recombination and repair protein RecA XM56_04135 IPR020584 DNA recombination/repair protein RecA, conserved site XM56_04135 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_04135 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain XM56_04135 IPR023400 DNA recombination and repair protein RecA, C-terminal XM56_04135 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface XM56_04140 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_04140 IPR003783 Regulatory protein RecX XM56_04145 IPR002318 Alanine-tRNA ligase, class IIc XM56_04145 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily XM56_04145 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal XM56_04145 IPR012947 Threonyl/alanyl tRNA synthetase, SAD XM56_04145 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria XM56_04145 IPR003156 DHHA1 domain XM56_04145 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain XM56_04145 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily XM56_04145 IPR009000 Translation protein, beta-barrel domain superfamily XM56_04150 IPR036107 Carbon storage regulator superfamily XM56_04150 IPR003751 Translational regulator CsrA XM56_04165 IPR023214 HAD superfamily XM56_04165 IPR041492 Haloacid dehalogenase-like hydrolase XM56_04165 IPR006439 HAD hydrolase, subfamily IA XM56_04165 IPR010976 Beta-phosphoglucomutase hydrolase XM56_04165 IPR023198 Phosphoglycolate phosphatase-like, domain 2 XM56_04165 IPR036412 HAD-like superfamily XM56_04170 IPR032816 SNARE associated Golgi protein XM56_04175 IPR007370 Glutamate--cysteine ligase XM56_04175 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain XM56_04175 IPR006334 Glutamate--cysteine ligase, monofunctional XM56_04180 IPR003815 S-ribosylhomocysteinase (LuxS) XM56_04180 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like XM56_04180 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily XM56_04190 IPR002550 CNNM, transmembrane domain XM56_04190 IPR000644 CBS domain XM56_04190 IPR016169 FAD-binding, type PCMH, subdomain 2 XM56_04190 IPR005170 Transporter-associated domain XM56_04190 IPR036318 FAD-binding, type PCMH-like superfamily XM56_04195 IPR002541 Cytochrome c assembly protein XM56_04200 IPR003593 AAA+ ATPase domain XM56_04200 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_04200 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily XM56_04200 IPR013822 Signal recognition particle SRP54, helical bundle XM56_04200 IPR004125 Signal recognition particle, SRP54 subunit, M-domain XM56_04200 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain XM56_04200 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily XM56_04200 IPR004780 Signal recognition particle protein XM56_04200 IPR022941 Signal recognition particle, SRP54 subunit XM56_04205 IPR000307 Ribosomal protein S16 XM56_04205 IPR020592 Ribosomal protein S16, conserved site XM56_04205 IPR023803 Ribosomal protein S16 domain superfamily XM56_04210 IPR027275 PRC-barrel domain XM56_04210 IPR009000 Translation protein, beta-barrel domain superfamily XM56_04210 IPR011033 PRC-barrel-like superfamily XM56_04210 IPR002676 RimM, N-terminal XM56_04210 IPR036976 RimM, N-terminal domain superfamily XM56_04210 IPR011961 16S rRNA processing protein RimM XM56_04215 IPR029028 Alpha/beta knot methyltransferases XM56_04215 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal XM56_04215 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria XM56_04215 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain XM56_04215 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal XM56_04220 IPR001857 Ribosomal protein L19 XM56_04220 IPR008991 Translation protein SH3-like domain superfamily XM56_04220 IPR018257 Ribosomal protein L19, conserved site XM56_04220 IPR038657 Ribosomal protein L19 superfamily XM56_04225 IPR007433 Protein of unknown function DUF481 XM56_04230 IPR004668 Anaerobic c4-dicarboxylate membrane transporter XM56_04235 IPR007492 LytTR DNA-binding domain XM56_04235 IPR011006 CheY-like superfamily XM56_04235 IPR001789 Signal transduction response regulator, receiver domain XM56_04240 IPR013785 Aldolase-type TIM barrel XM56_04240 IPR006218 DAHP synthetase I/KDSA XM56_04240 IPR006219 DHAP synthase, class 1 XM56_04245 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily XM56_04245 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein XM56_04245 IPR036291 NAD(P)-binding domain superfamily XM56_04245 IPR002701 Chorismate mutase II, prokaryotic-type XM56_04245 IPR036979 Chorismate mutase domain superfamily XM56_04245 IPR036263 Chorismate mutase type II superfamily XM56_04245 IPR003099 Prephenate dehydrogenase XM56_04245 IPR011277 Chorismate mutase, T-protein XM56_04250 IPR036979 Chorismate mutase domain superfamily XM56_04250 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase XM56_04250 IPR036263 Chorismate mutase type II superfamily XM56_04250 IPR002912 ACT domain XM56_04250 IPR018528 Prephenate dehydratase, conserved site XM56_04250 IPR002701 Chorismate mutase II, prokaryotic-type XM56_04250 IPR010952 Chorismate mutase, gammaproteobacteria XM56_04250 IPR001086 Prephenate dehydratase XM56_04255 IPR003346 Transposase, IS116/IS110/IS902 XM56_04255 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal XM56_04260 IPR003346 Transposase, IS116/IS110/IS902 XM56_04260 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal XM56_04265 IPR017730 Chaperonin ClpB XM56_04265 IPR019489 Clp ATPase, C-terminal XM56_04265 IPR036628 Clp, N-terminal domain superfamily XM56_04265 IPR004176 Clp, N-terminal XM56_04265 IPR018368 ClpA/B, conserved site 1 XM56_04265 IPR028299 ClpA/B, conserved site 2 XM56_04265 IPR041546 ClpA/ClpB, AAA lid domain XM56_04265 IPR003593 AAA+ ATPase domain XM56_04265 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_04265 IPR001270 ClpA/B family XM56_04265 IPR003959 ATPase, AAA-type, core XM56_04275 IPR006145 Pseudouridine synthase, RsuA/RluA XM56_04275 IPR036986 RNA-binding S4 domain superfamily XM56_04275 IPR002942 RNA-binding S4 domain XM56_04275 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site XM56_04275 IPR006225 Pseudouridine synthase, RluC/RluD XM56_04275 IPR020103 Pseudouridine synthase, catalytic domain superfamily XM56_04280 IPR017689 Outer membrane protein assembly factor BamD XM56_04280 IPR011990 Tetratricopeptide-like helical domain superfamily XM56_04280 IPR039565 Outer membrane lipoprotein BamD-like XM56_04285 IPR036567 Ribosome hibernation promotion factor-like XM56_04285 IPR003489 Ribosome hibernation promoting factor/RaiA XM56_04315 IPR018736 Protein of unknown function DUF2279, periplasmic lipoprotein XM56_04315 IPR017028 Uncharacterised conserved protein UCP034456 XM56_04320 IPR025202 Phospholipase D-like domain XM56_04320 IPR016270 CDP-alcohol phosphatidyltransferase class-II family XM56_04320 IPR001736 Phospholipase D/Transphosphatidylase XM56_04325 IPR013815 ATP-grasp fold, subdomain 1 XM56_04325 IPR011761 ATP-grasp fold XM56_04325 IPR003781 CoA-binding XM56_04325 IPR016181 Acyl-CoA N-acyltransferase XM56_04325 IPR036291 NAD(P)-binding domain superfamily XM56_04325 IPR016102 Succinyl-CoA synthetase-like XM56_04325 IPR000182 GNAT domain XM56_04325 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain XM56_04335 IPR036249 Thioredoxin-like superfamily XM56_04335 IPR017937 Thioredoxin, conserved site XM56_04335 IPR013766 Thioredoxin domain XM56_04335 IPR005746 Thioredoxin XM56_04340 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal XM56_04340 IPR029028 Alpha/beta knot methyltransferases XM56_04340 IPR029064 50S ribosomal protein L30e-like XM56_04340 IPR004441 RNA methyltransferase TrmH family XM56_04340 IPR001537 tRNA/rRNA methyltransferase, SpoU type XM56_04340 IPR013123 RNA 2-O ribose methyltransferase, substrate binding XM56_04340 IPR016479 tRNA/rRNA methyltransferase, YfiF, predicted XM56_04355 IPR020846 Major facilitator superfamily domain XM56_04355 IPR004638 Drug resistance transporter EmrB-like XM56_04355 IPR011701 Major facilitator superfamily XM56_04355 IPR036259 MFS transporter superfamily XM56_04360 IPR005694 Efflux pump membrane protein XM56_04360 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain XM56_04365 IPR010131 RND efflux system, outer membrane lipoprotein, NodT XM56_04365 IPR003423 Outer membrane efflux protein XM56_04370 IPR000835 MarR-type HTH domain XM56_04370 IPR023187 Transcriptional regulator MarR-type, conserved site XM56_04370 IPR036390 Winged helix DNA-binding domain superfamily XM56_04370 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_04375 IPR008407 Branched-chain amino acid transport, AzlD XM56_04380 IPR011606 Branched-chain amino acid transport, permease XM56_04385 IPR011701 Major facilitator superfamily XM56_04385 IPR020846 Major facilitator superfamily domain XM56_04385 IPR036259 MFS transporter superfamily XM56_04405 IPR036928 Amidase signature (AS) superfamily XM56_04405 IPR014087 1-carboxybiuret hydrolase, AtzE subunit XM56_04405 IPR023631 Amidase signature domain XM56_04405 IPR000120 Amidase XM56_04420 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF XM56_04420 IPR018313 Solute-binding protein family 3, conserved site XM56_04420 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter XM56_04420 IPR001320 Ionotropic glutamate receptor XM56_04425 IPR000515 ABC transporter type 1, transmembrane domain MetI-like XM56_04425 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain XM56_04425 IPR035906 MetI-like superfamily XM56_04430 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain XM56_04430 IPR035906 MetI-like superfamily XM56_04430 IPR000515 ABC transporter type 1, transmembrane domain MetI-like XM56_04435 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_04435 IPR017871 ABC transporter, conserved site XM56_04435 IPR003439 ABC transporter-like XM56_04435 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type XM56_04435 IPR003593 AAA+ ATPase domain XM56_04440 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase XM56_04440 IPR015421 Pyridoxal phosphate-dependent transferase, major domain XM56_04440 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 XM56_04440 IPR015424 Pyridoxal phosphate-dependent transferase XM56_04440 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site XM56_04440 IPR000192 Aminotransferase class V domain XM56_04445 IPR011650 Peptidase M20, dimerisation domain XM56_04445 IPR010158 Amidase, carbamoylase-type XM56_04445 IPR002933 Peptidase M20 XM56_04445 IPR036264 Bacterial exopeptidase dimerisation domain XM56_04455 IPR003010 Carbon-nitrogen hydrolase XM56_04455 IPR036526 Carbon-nitrogen hydrolase superfamily XM56_04455 IPR001110 Uncharacterised protein family UPF0012, conserved site XM56_04460 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 XM56_04460 IPR015424 Pyridoxal phosphate-dependent transferase XM56_04460 IPR004839 Aminotransferase, class I/classII XM56_04460 IPR015421 Pyridoxal phosphate-dependent transferase, major domain XM56_04465 IPR017714 Methylthioribulose-1-phosphate dehydratase XM56_04465 IPR036409 Class II aldolase/adducin N-terminal domain superfamily XM56_04465 IPR001303 Class II aldolase/adducin N-terminal XM56_04470 IPR023214 HAD superfamily XM56_04470 IPR036412 HAD-like superfamily XM56_04470 IPR006439 HAD hydrolase, subfamily IA XM56_04470 IPR023943 Enolase-phosphatase E1 XM56_04475 IPR011051 RmlC-like cupin domain superfamily XM56_04475 IPR014710 RmlC-like jelly roll fold XM56_04475 IPR023956 Acireductone dioxygenase ARD, bacteria XM56_04475 IPR004313 Acireductone dioxygenase ARD family XM56_04480 IPR011559 Initiation factor 2B alpha/beta/delta XM56_04480 IPR005251 Methylthioribose-1-phosphate isomerase XM56_04480 IPR027363 Methylthioribose-1-phosphate isomerase, N-terminal XM56_04480 IPR000649 Initiation factor 2B-related XM56_04480 IPR037171 NagB/RpiA transferase-like XM56_04485 IPR002575 Aminoglycoside phosphotransferase XM56_04485 IPR009212 Methylthioribose kinase XM56_04485 IPR011009 Protein kinase-like domain superfamily XM56_04490 IPR005565 Haemolysin activator HlyB, C-terminal XM56_04490 IPR013686 Polypeptide-transport-associated, ShlB-type XM56_04490 IPR034746 POTRA domain XM56_04500 IPR040542 HMW1 domain 2 XM56_04500 IPR041109 HMW1C N-terminal XM56_04505 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal XM56_04505 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal XM56_04505 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal XM56_04505 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily XM56_04505 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily XM56_04505 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type XM56_04510 IPR004515 Phosphoheptose isomerase XM56_04510 IPR001347 Sugar isomerase (SIS) XM56_04510 IPR035461 GmhA/DiaA XM56_04515 IPR029055 Nucleophile aminohydrolases, N-terminal XM56_04515 IPR026869 Putative glutamine amidotransferase type 2 XM56_04515 IPR017932 Glutamine amidotransferase type 2 domain XM56_04520 IPR005490 L,D-transpeptidase catalytic domain XM56_04520 IPR038063 L,D-transpeptidase catalytic domain-like XM56_04525 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A XM56_04525 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain XM56_04530 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B XM56_04530 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD XM56_04535 IPR007329 FMN-binding XM56_04535 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C XM56_04540 IPR003667 NqrDE/RnfAE XM56_04540 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D XM56_04545 IPR003667 NqrDE/RnfAE XM56_04545 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E XM56_04550 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain XM56_04550 IPR017927 FAD-binding domain, ferredoxin reductase-type XM56_04550 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase XM56_04550 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain XM56_04550 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain XM56_04550 IPR001433 Oxidoreductase FAD/NAD(P)-binding XM56_04550 IPR017938 Riboflavin synthase-like beta-barrel XM56_04550 IPR036010 2Fe-2S ferredoxin-like superfamily XM56_04550 IPR012675 Beta-grasp domain superfamily XM56_04550 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F XM56_04555 IPR003374 ApbE-like superfamily XM56_04555 IPR024932 Flavin transferase ApbE XM56_04555 IPR042159 Flavin-trafficking protein ApbE XM56_04560 IPR007495 (Na+)-NQR maturation factor NqrM XM56_04565 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily XM56_04565 IPR030395 Glycerophosphodiester phosphodiesterase domain XM56_04570 IPR011127 D-alanine--D-alanine ligase, N-terminal domain XM56_04570 IPR011761 ATP-grasp fold XM56_04570 IPR013815 ATP-grasp fold, subdomain 1 XM56_04570 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site XM56_04570 IPR005905 D-alanine--D-alanine ligase XM56_04570 IPR011095 D-alanine--D-alanine ligase, C-terminal XM56_04570 IPR016185 Pre-ATP-grasp domain superfamily XM56_04575 IPR039445 Transcriptional regulator DauR-like, HTH domain XM56_04575 IPR039446 Transcriptional regulator DauR-like XM56_04575 IPR013559 YheO-like XM56_04580 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme XM56_04580 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site XM56_04580 IPR001926 Pyridoxal-phosphate dependent enzyme XM56_04590 IPR036775 DNA polymerase, Y-family, little finger domain superfamily XM56_04590 IPR024728 DNA polymerase type-Y, HhH motif XM56_04590 IPR022880 DNA polymerase IV XM56_04590 IPR001126 UmuC domain XM56_04590 IPR017961 DNA polymerase, Y-family, little finger domain XM56_04595 IPR001160 Peptidase M20C, Xaa-His dipeptidase XM56_04595 IPR011650 Peptidase M20, dimerisation domain XM56_04595 IPR002933 Peptidase M20 XM56_04600 IPR000836 Phosphoribosyltransferase domain XM56_04600 IPR029057 Phosphoribosyltransferase-like XM56_04600 IPR023747 Xanthine-guanine phosphoribosyltransferase XM56_04610 IPR009986 Sigma factor-binding transcriptional regulator Crl XM56_04610 IPR038208 Sigma factor-binding protein Crl superfamily XM56_04615 IPR001057 Glutamate/acetylglutamate kinase XM56_04615 IPR015947 PUA-like superfamily XM56_04615 IPR036974 PUA domain superfamily XM56_04615 IPR041739 Glutamate-5-kinase domain XM56_04615 IPR036393 Acetylglutamate kinase-like superfamily XM56_04615 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase XM56_04615 IPR011529 Glutamate 5-kinase XM56_04615 IPR019797 Glutamate 5-kinase, conserved site XM56_04615 IPR001048 Aspartate/glutamate/uridylate kinase XM56_04615 IPR002478 PUA domain XM56_04620 IPR015590 Aldehyde dehydrogenase domain XM56_04620 IPR000965 GPR domain XM56_04620 IPR016162 Aldehyde dehydrogenase, N-terminal XM56_04620 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site XM56_04620 IPR016161 Aldehyde/histidinol dehydrogenase XM56_04620 IPR016163 Aldehyde dehydrogenase, C-terminal XM56_04620 IPR012134 Glutamate-5-semialdehyde dehydrogenase XM56_04625 IPR011663 UbiC transcription regulator-associated XM56_04625 IPR000524 Transcription regulator HTH, GntR XM56_04625 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily XM56_04625 IPR036390 Winged helix DNA-binding domain superfamily XM56_04625 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_04630 IPR003352 Phosphotransferase system, EIIC XM56_04630 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site XM56_04630 IPR010975 Phosphotransferase system, alpha-glucoside-specific IIBC component XM56_04630 IPR001996 Phosphotransferase system, IIB component, type 1 XM56_04630 IPR013013 Phosphotransferase system, EIIC component, type 1 XM56_04630 IPR036878 Glucose permease domain IIB XM56_04630 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component XM56_04635 IPR022616 Glycosyl hydrolase, family 4, C-terminal XM56_04635 IPR036291 NAD(P)-binding domain superfamily XM56_04635 IPR001088 Glycoside hydrolase, family 4 XM56_04635 IPR019802 Glycoside hydrolase, family 4, conserved site XM56_04635 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal XM56_04640 IPR009875 PilZ domain XM56_04640 IPR012349 FMN-binding split barrel XM56_04640 IPR023787 Type III secretion system flagellar brake protein YcgR XM56_04640 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal XM56_04645 IPR037824 NdvB, GH94N domain 2 XM56_04645 IPR008928 Six-hairpin glycosidase superfamily XM56_04645 IPR012341 Six-hairpin glycosidase-like superfamily XM56_04645 IPR009342 Putative carbohydrate binding domain XM56_04645 IPR019282 Domain of unknown function DUF2329 XM56_04645 IPR011013 Galactose mutarotase-like domain superfamily XM56_04645 IPR037820 NdvB, GH94N domain 1 XM56_04645 IPR033432 Glycosyl hydrolase 36, catalytic domain XM56_04645 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily XM56_04645 IPR010383 Glycosyl hydrolase 94 XM56_04660 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XM56_04660 IPR013216 Methyltransferase type 11 XM56_04680 IPR037066 TonB-dependent receptor, plug domain superfamily XM56_04680 IPR012910 TonB-dependent receptor, plug domain XM56_04680 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily XM56_04680 IPR010105 TonB-dependent siderophore receptor XM56_04680 IPR039423 TonB-dependent receptor-like XM56_04680 IPR000531 TonB-dependent receptor-like, beta-barrel XM56_04685 IPR027544 Shikimate kinase 2 XM56_04685 IPR031322 Shikimate kinase/gluconokinase XM56_04685 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_04685 IPR023000 Shikimate kinase, conserved site XM56_04685 IPR000623 Shikimate kinase/Threonine synthase-like 1 XM56_04690 IPR011051 RmlC-like cupin domain superfamily XM56_04690 IPR014710 RmlC-like jelly roll fold XM56_04690 IPR009664 Pyrimidine/purine nucleoside phosphorylase XM56_04695 IPR007476 Putative exonuclease, RdgC XM56_04700 IPR000600 ROK family XM56_04705 IPR004592 Nuclease SbcC, gammaproteobacteria type XM56_04705 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_04705 IPR038729 Rad50/SbcC-type AAA domain XM56_04710 IPR004593 Nuclease SbcCD subunit D XM56_04710 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain XM56_04710 IPR029052 Metallo-dependent phosphatase-like XM56_04710 IPR026843 Nuclease SbcCD subunit D, C-terminal domain XM56_04710 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type XM56_04715 IPR011006 CheY-like superfamily XM56_04715 IPR001867 OmpR/PhoB-type DNA-binding domain XM56_04715 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB XM56_04715 IPR001789 Signal transduction response regulator, receiver domain XM56_04715 IPR039420 Transcriptional regulatory protein WalR-like XM56_04715 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_04720 IPR000014 PAS domain XM56_04720 IPR004358 Signal transduction histidine kinase-related protein, C-terminal XM56_04720 IPR021766 Phosphate regulon sensor protein PhoR XM56_04720 IPR013767 PAS fold XM56_04720 IPR035965 PAS domain superfamily XM56_04720 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily XM56_04720 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain XM56_04720 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR XM56_04720 IPR005467 Histidine kinase domain XM56_04720 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XM56_04720 IPR003594 Histidine kinase/HSP90-like ATPase XM56_04725 IPR011862 Phosphate binding protein XM56_04725 IPR024370 PBP domain XM56_04730 IPR004685 Branched-chain amino acid transport system II carrier protein XM56_04735 IPR004841 Amino acid permease/ SLC12A domain XM56_04735 IPR004840 Amino acid permease, conserved site XM56_04740 IPR017853 Glycoside hydrolase superfamily XM56_04740 IPR013780 Glycosyl hydrolase, all-beta XM56_04740 IPR017069 Maltodextrin glucosidase XM56_04740 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain XM56_04740 IPR006047 Glycosyl hydrolase, family 13, catalytic domain XM56_04740 IPR014756 Immunoglobulin E-set XM56_04745 IPR036291 NAD(P)-binding domain superfamily XM56_04745 IPR002347 Short-chain dehydrogenase/reductase SDR XM56_04745 IPR020904 Short-chain dehydrogenase/reductase, conserved site XM56_04745 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase XM56_04750 IPR000101 Gamma-glutamyltranspeptidase XM56_04750 IPR029055 Nucleophile aminohydrolases, N-terminal XM56_04755 IPR000021 Hok/gef cell toxic protein XM56_04755 IPR018084 Hok/gef cell toxic protein, conserved site XM56_04760 IPR024706 Peroxiredoxin, AhpC-type XM56_04760 IPR036249 Thioredoxin-like superfamily XM56_04760 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant XM56_04760 IPR013766 Thioredoxin domain XM56_04760 IPR019479 Peroxiredoxin, C-terminal XM56_04765 IPR023491 Acyl carrier protein phosphodiesterase, gammaproteobacteria XM56_04765 IPR007431 Acyl carrier protein phosphodiesterase XM56_04770 IPR042119 QueA, domain 2 XM56_04770 IPR042118 QueA, domain 1 XM56_04770 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily XM56_04770 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA XM56_04785 IPR004803 tRNA-guanine transglycosylase XM56_04785 IPR002616 tRNA-guanine(15) transglycosylase-like XM56_04785 IPR036511 Queuine tRNA-ribosyltransferase-like XM56_04790 IPR003849 Preprotein translocase YajC XM56_04795 IPR027398 SecD export protein N-terminal TM domain XM56_04795 IPR005791 Protein translocase subunit SecD XM56_04795 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site XM56_04795 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial XM56_04795 IPR022645 Protein-export membrane protein SecD/SecF, bacterial XM56_04800 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site XM56_04800 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial XM56_04800 IPR005665 Protein-export membrane protein SecF, bacterial XM56_04800 IPR022645 Protein-export membrane protein SecD/SecF, bacterial XM56_04820 IPR003796 Ribonucleotide reductase regulator NrdR-like XM56_04820 IPR005144 ATP-cone domain XM56_04825 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal XM56_04825 IPR016192 APOBEC/CMP deaminase, zinc-binding XM56_04825 IPR002125 Cytidine and deoxycytidylate deaminase domain XM56_04825 IPR016193 Cytidine deaminase-like XM56_04825 IPR024072 Dihydrofolate reductase-like domain superfamily XM56_04825 IPR004794 Riboflavin biosynthesis protein RibD XM56_04825 IPR011549 Riboflavin-specific deaminase, C-terminal XM56_04830 IPR036467 Lumazine/riboflavin synthase superfamily XM56_04830 IPR002180 Lumazine/riboflavin synthase XM56_04830 IPR034964 Lumazine synthase XM56_04835 IPR011605 NusB antitermination factor XM56_04835 IPR006027 NusB/RsmB/TIM44 XM56_04835 IPR035926 NusB-like superfamily XM56_04840 IPR016188 PurM-like, N-terminal domain XM56_04840 IPR006283 Thiamine-monophosphate kinase XM56_04840 IPR036921 PurM-like, N-terminal domain superfamily XM56_04840 IPR036676 PurM-like, C-terminal domain superfamily XM56_04840 IPR010918 PurM-like, C-terminal domain XM56_04845 IPR007686 YutG/PgpA domain XM56_04845 IPR036681 PgpA-like superfamily XM56_04845 IPR026037 Phosphatidylglycerophosphatase A XM56_04855 IPR020826 Transketolase binding site XM56_04855 IPR005477 Deoxyxylulose-5-phosphate synthase XM56_04855 IPR029061 Thiamin diphosphate-binding fold XM56_04855 IPR005475 Transketolase-like, pyrimidine-binding domain XM56_04855 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II XM56_04855 IPR033248 Transketolase, C-terminal domain XM56_04860 IPR000092 Polyprenyl synthetase XM56_04860 IPR033749 Polyprenyl synthetase, conserved site XM56_04860 IPR008949 Isoprenoid synthase domain superfamily XM56_04865 IPR003761 Exonuclease VII, small subunit XM56_04865 IPR037004 Exonuclease VII, small subunit superfamily XM56_04870 IPR026340 Thiazole biosynthesis domain XM56_04870 IPR020536 Thil, AANH domain XM56_04870 IPR001763 Rhodanese-like domain XM56_04870 IPR036873 Rhodanese-like domain superfamily XM56_04870 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XM56_04870 IPR003720 tRNA sulfurtransferase ThiI XM56_04870 IPR004114 THUMP domain XM56_04875 IPR006287 Protein/nucleic acid deglycase DJ-1 XM56_04875 IPR029062 Class I glutamine amidotransferase-like XM56_04875 IPR002818 DJ-1/PfpI XM56_04880 IPR036291 NAD(P)-binding domain superfamily XM56_04880 IPR013752 Ketopantoate reductase, C-terminal domain XM56_04880 IPR013328 6-phosphogluconate dehydrogenase, domain 2 XM56_04880 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily XM56_04880 IPR013332 Ketopantoate reductase, N-terminal domain XM56_04880 IPR003710 Ketopantoate reductase ApbA/PanE XM56_04885 IPR036183 YajQ-like superfamily XM56_04885 IPR007551 Protein of unknown function DUF520 XM56_04885 IPR035571 UPF0234-like, C-terminal XM56_04885 IPR035570 UPF0234, N-terminal XM56_04890 IPR011701 Major facilitator superfamily XM56_04890 IPR036259 MFS transporter superfamily XM56_04890 IPR020846 Major facilitator superfamily domain XM56_04895 IPR006369 Protohaem IX farnesyltransferase XM56_04895 IPR000537 UbiA prenyltransferase family XM56_04895 IPR030470 UbiA prenyltransferase conserved site XM56_04900 IPR014210 Cytochrome o ubiquinol oxidase subunit IV XM56_04900 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes XM56_04905 IPR035973 Cytochrome c oxidase subunit III-like superfamily XM56_04905 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle XM56_04905 IPR014206 Cytochrome o ubiquinol oxidase, subunit III XM56_04905 IPR033946 Ubiquinol oxidase subunit III domain XM56_04905 IPR000298 Cytochrome c oxidase subunit III-like XM56_04905 IPR024791 Cytochrome c oxidase subunit III XM56_04910 IPR036927 Cytochrome c oxidase-like, subunit I superfamily XM56_04910 IPR000883 Cytochrome c oxidase subunit I XM56_04910 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site XM56_04910 IPR023616 Cytochrome c oxidase-like, subunit I domain XM56_04910 IPR014207 Cytochrome o ubiquinol oxidase, subunit I XM56_04915 IPR010514 COX aromatic rich motif XM56_04915 IPR002429 Cytochrome c oxidase subunit II-like C-terminal XM56_04915 IPR008972 Cupredoxin XM56_04915 IPR034227 Ubiquinol oxidase subunit 2, cupredoxin domain XM56_04915 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain XM56_04915 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily XM56_04915 IPR006333 Cytochrome o ubiquinol oxidase subunit II XM56_04920 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily XM56_04920 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like XM56_04925 IPR011701 Major facilitator superfamily XM56_04925 IPR036259 MFS transporter superfamily XM56_04925 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 XM56_04925 IPR020846 Major facilitator superfamily domain XM56_04930 IPR012640 Membrane lipoprotein, lipid attachment site XM56_04930 IPR005619 Uncharacterised protein family, YajG XM56_04935 IPR002634 BolA protein XM56_04935 IPR036065 BolA-like superfamily XM56_04945 IPR005215 Trigger factor XM56_04945 IPR008880 Trigger factor, C-terminal XM56_04945 IPR037041 Trigger factor, C-terminal domain superfamily XM56_04945 IPR008881 Trigger factor, ribosome-binding, bacterial XM56_04945 IPR036611 Trigger factor ribosome-binding domain superfamily XM56_04945 IPR027304 Trigger factor/SurA domain superfamily XM56_04945 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain XM56_04950 IPR033135 ClpP, histidine active site XM56_04950 IPR001907 ATP-dependent Clp protease proteolytic subunit XM56_04950 IPR018215 ClpP, Ser active site XM56_04950 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA XM56_04950 IPR029045 ClpP/crotonase-like domain superfamily XM56_04955 IPR003959 ATPase, AAA-type, core XM56_04955 IPR019489 Clp ATPase, C-terminal XM56_04955 IPR004487 Clp protease, ATP-binding subunit ClpX XM56_04955 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_04955 IPR010603 Zinc finger, ClpX C4-type XM56_04955 IPR003593 AAA+ ATPase domain XM56_04955 IPR038366 Zinc finger, ClpX C4-type superfamily XM56_04960 IPR003111 Lon, substrate-binding domain XM56_04960 IPR027065 Lon protease XM56_04960 IPR003959 ATPase, AAA-type, core XM56_04960 IPR027543 Lon protease, bacterial XM56_04960 IPR003593 AAA+ ATPase domain XM56_04960 IPR004815 Lon protease, bacterial/eukaryotic-type XM56_04960 IPR008269 Peptidase S16, Lon proteolytic domain XM56_04960 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_04960 IPR015947 PUA-like superfamily XM56_04960 IPR020568 Ribosomal protein S5 domain 2-type fold XM56_04960 IPR008268 Peptidase S16, active site XM56_04960 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup XM56_04965 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily XM56_04965 IPR000119 Histone-like DNA-binding protein XM56_04965 IPR020816 Histone-like DNA-binding protein, conserved site XM56_04970 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type XM56_04970 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site XM56_04970 IPR027304 Trigger factor/SurA domain superfamily XM56_04975 IPR010994 RuvA domain 2-like XM56_04975 IPR004509 Competence protein ComEA, helix-hairpin-helix domain XM56_04980 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family XM56_04980 IPR029069 HotDog domain superfamily XM56_04985 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XM56_04985 IPR018317 Queuosine biosynthesis protein QueC XM56_04990 IPR039424 Solute-binding protein family 5 XM56_04990 IPR000914 Solute-binding protein family 5 domain XM56_04990 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain XM56_04995 IPR023214 HAD superfamily XM56_04995 IPR036412 HAD-like superfamily XM56_04995 IPR000150 Cof family XM56_04995 IPR006379 HAD-superfamily hydrolase, subfamily IIB XM56_04995 IPR023938 HMP-PP phosphatase XM56_05005 IPR036390 Winged helix DNA-binding domain superfamily XM56_05005 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_05005 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain XM56_05005 IPR019888 Transcription regulator AsnC-type XM56_05005 IPR011008 Dimeric alpha-beta barrel XM56_05005 IPR000485 AsnC-type HTH domain XM56_05005 IPR011991 ArsR-like helix-turn-helix domain XM56_05005 IPR019885 Transcription regulator HTH, AsnC-type, conserved site XM56_05010 IPR036640 ABC transporter type 1, transmembrane domain superfamily XM56_05010 IPR039421 Type I protein exporter XM56_05010 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_05010 IPR017871 ABC transporter, conserved site XM56_05010 IPR003593 AAA+ ATPase domain XM56_05010 IPR003439 ABC transporter-like XM56_05010 IPR011527 ABC transporter type 1, transmembrane domain XM56_05015 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_05015 IPR039421 Type I protein exporter XM56_05015 IPR003439 ABC transporter-like XM56_05015 IPR036640 ABC transporter type 1, transmembrane domain superfamily XM56_05015 IPR017871 ABC transporter, conserved site XM56_05015 IPR003593 AAA+ ATPase domain XM56_05015 IPR011527 ABC transporter type 1, transmembrane domain XM56_05020 IPR002332 Nitrogen regulatory protein P-II, urydylation site XM56_05020 IPR017918 Nitrogen regulatory protein PII, conserved site XM56_05020 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal XM56_05020 IPR002187 Nitrogen regulatory protein PII XM56_05020 IPR011322 Nitrogen regulatory PII-like, alpha/beta XM56_05025 IPR029020 Ammonium/urea transporter XM56_05025 IPR001905 Ammonium transporter XM56_05025 IPR018047 Ammonium transporter, conserved site XM56_05025 IPR024041 Ammonium transporter AmtB-like domain XM56_05030 IPR029069 HotDog domain superfamily XM56_05030 IPR003703 Acyl-CoA thioesterase XM56_05035 IPR039366 YscW/ExsB XM56_05040 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain XM56_05040 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_05040 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding XM56_05045 IPR007985 Haemolysin expression modulating, HHA XM56_05045 IPR036666 HHA superfamily XM56_05050 IPR019693 Biofilm formation regulator YbaJ XM56_05060 IPR003593 AAA+ ATPase domain XM56_05060 IPR003439 ABC transporter-like XM56_05060 IPR017871 ABC transporter, conserved site XM56_05060 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_05065 IPR001626 ABC transporter, TroCD-like XM56_05065 IPR037294 ABC transporter, BtuC-like XM56_05070 IPR006129 Adhesin B XM56_05070 IPR006128 Adhesion lipoprotein XM56_05070 IPR006127 Periplasmic solute binding protein, ZnuA-like XM56_05075 IPR000473 Ribosomal protein L36 XM56_05075 IPR035977 Ribosomal protein L36 superfamily XM56_05080 IPR034704 L28p-like XM56_05080 IPR002150 Ribosomal protein L31 XM56_05080 IPR027493 Ribosomal protein L31 type B XM56_05080 IPR042105 Ribosomal protein L31 superfamily XM56_05085 IPR019733 Uncharacterised protein family YhfT XM56_05090 IPR021238 Protein of unknown function DUF2620 XM56_05095 IPR006124 Metalloenzyme XM56_05095 IPR024052 Phosphopentomutase DeoB cap domain superfamily XM56_05095 IPR010045 Phosphopentomutase XM56_05095 IPR017850 Alkaline-phosphatase-like, core domain superfamily XM56_05100 IPR029066 PLP-binding barrel XM56_05100 IPR001608 Alanine racemase, N-terminal XM56_05110 IPR001036 Acriflavin resistance protein XM56_05110 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 XM56_05110 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XM56_05115 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain XM56_05115 IPR006143 RND efflux pump, membrane fusion protein XM56_05120 IPR013572 Transcription regulator MAATS, C-terminal XM56_05120 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily XM56_05120 IPR001647 DNA-binding HTH domain, TetR-type XM56_05120 IPR023772 DNA-binding HTH domain, TetR-type, conserved site XM56_05120 IPR009057 Homeobox-like domain superfamily XM56_05125 IPR003787 Sulphur relay, DsrE/F-like protein XM56_05125 IPR027396 DsrEFH-like XM56_05130 IPR011066 Mechanosensitive ion channel MscS, C-terminal XM56_05130 IPR023298 P-type ATPase, transmembrane domain superfamily XM56_05130 IPR010920 LSM domain superfamily XM56_05130 IPR006686 Mechanosensitive ion channel MscS, conserved site XM56_05130 IPR024393 Mechanosensitive ion channel MscS, porin domain XM56_05130 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 XM56_05130 IPR023408 Mechanosensitive ion channel MscS domain superfamily XM56_05130 IPR025692 Mechanosensitive ion channel inner membrane domain 1 XM56_05130 IPR006685 Mechanosensitive ion channel MscS XM56_05135 IPR019630 Protein of unknown function DUF2496, YbaM-related XM56_05145 IPR007401 Protein of unknown function DUF454 XM56_05150 IPR005764 Adenine phosphoribosyl transferase XM56_05150 IPR000836 Phosphoribosyltransferase domain XM56_05150 IPR029057 Phosphoribosyltransferase-like XM56_05155 IPR012763 DNA polymerase III, subunit gamma/ tau XM56_05155 IPR003593 AAA+ ATPase domain XM56_05155 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_05155 IPR021029 DNA polymerase III, tau subunit, domain V XM56_05155 IPR001270 ClpA/B family XM56_05155 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal XM56_05155 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV XM56_05155 IPR022754 DNA polymerase III, gamma subunit, domain III XM56_05155 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily XM56_05160 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily XM56_05160 IPR004401 Nucleoid-associated protein YbaB/EbfC family XM56_05165 IPR023627 Recombination protein RecR XM56_05165 IPR000093 DNA recombination protein RecR XM56_05165 IPR023628 Recombination protein RecR, C4-type zinc finger XM56_05165 IPR034137 RecR, TOPRIM domain XM56_05165 IPR015967 Recombination protein RecR, conserved site XM56_05165 IPR006171 TOPRIM domain XM56_05170 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XM56_05170 IPR037196 HSP90, C-terminal domain XM56_05170 IPR019805 Heat shock protein Hsp90, conserved site XM56_05170 IPR001404 Heat shock protein Hsp90 family XM56_05170 IPR020575 Heat shock protein Hsp90, N-terminal XM56_05170 IPR003594 Histidine kinase/HSP90-like ATPase XM56_05170 IPR020568 Ribosomal protein S5 domain 2-type fold XM56_05175 IPR006259 Adenylate kinase subfamily XM56_05175 IPR000850 Adenylate kinase/UMP-CMP kinase XM56_05175 IPR033690 Adenylate kinase, conserved site XM56_05175 IPR007862 Adenylate kinase, active site lid domain XM56_05175 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_05180 IPR033644 Ferrochelatase, C-terminal XM56_05180 IPR019772 Ferrochelatase, active site XM56_05180 IPR033659 Ferrochelatase, N-terminal XM56_05180 IPR001015 Ferrochelatase XM56_05185 IPR002797 Polysaccharide biosynthesis protein XM56_05190 IPR001173 Glycosyltransferase 2-like XM56_05190 IPR002495 Glycosyl transferase, family 8 XM56_05190 IPR029044 Nucleotide-diphospho-sugar transferases XM56_05195 IPR001173 Glycosyltransferase 2-like XM56_05195 IPR029044 Nucleotide-diphospho-sugar transferases XM56_05200 IPR001296 Glycosyl transferase, family 1 XM56_05200 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain XM56_05210 IPR000715 Glycosyl transferase, family 4 XM56_05210 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site XM56_05215 IPR036291 NAD(P)-binding domain superfamily XM56_05215 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain XM56_05215 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XM56_05220 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain XM56_05220 IPR001296 Glycosyl transferase, family 1 XM56_05225 IPR036291 NAD(P)-binding domain superfamily XM56_05225 IPR005886 UDP-glucose 4-epimerase XM56_05225 IPR016040 NAD(P)-binding domain XM56_05230 IPR029056 Ribokinase-like XM56_05230 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site XM56_05230 IPR011611 Carbohydrate kinase PfkB XM56_05235 IPR038770 Sodium/solute symporter superfamily XM56_05235 IPR036291 NAD(P)-binding domain superfamily XM56_05235 IPR003148 Regulator of K+ conductance, N-terminal XM56_05235 IPR004771 K+/H+ exchanger XM56_05235 IPR006153 Cation/H+ exchanger XM56_05240 IPR036259 MFS transporter superfamily XM56_05240 IPR020846 Major facilitator superfamily domain XM56_05240 IPR011701 Major facilitator superfamily XM56_05245 IPR036907 5'-Nucleotidase, C-terminal domain superfamily XM56_05245 IPR006146 5'-Nucleotidase, conserved site XM56_05245 IPR006179 5'-Nucleotidase/apyrase XM56_05245 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type XM56_05245 IPR029052 Metallo-dependent phosphatase-like XM56_05245 IPR008334 5'-Nucleotidase, C-terminal XM56_05255 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC XM56_05255 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain XM56_05255 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily XM56_05260 IPR002816 TraB family XM56_05265 IPR023298 P-type ATPase, transmembrane domain superfamily XM56_05265 IPR023299 P-type ATPase, cytoplasmic domain N XM56_05265 IPR027256 P-type ATPase, subfamily IB XM56_05265 IPR036163 Heavy metal-associated domain superfamily XM56_05265 IPR006121 Heavy metal-associated domain, HMA XM56_05265 IPR017969 Heavy-metal-associated, conserved site XM56_05265 IPR001757 P-type ATPase XM56_05265 IPR036412 HAD-like superfamily XM56_05265 IPR008250 P-type ATPase, A domain superfamily XM56_05265 IPR018303 P-type ATPase, phosphorylation site XM56_05265 IPR023214 HAD superfamily XM56_05270 IPR000551 MerR-type HTH domain XM56_05270 IPR009061 Putative DNA-binding domain superfamily XM56_05270 IPR011789 Cu(I)-responsive transcriptional regulator XM56_05275 IPR002810 NfeD-like, C-terminal domain XM56_05280 IPR032435 Band 7, C-terminal extension XM56_05280 IPR001972 Stomatin family XM56_05280 IPR001107 Band 7 domain XM56_05280 IPR036013 Band 7/SPFH domain superfamily XM56_05280 IPR018080 Band 7/stomatin-like, conserved site XM56_05285 IPR013766 Thioredoxin domain XM56_05285 IPR036249 Thioredoxin-like superfamily XM56_05285 IPR011990 Tetratricopeptide-like helical domain superfamily XM56_05290 IPR002347 Short-chain dehydrogenase/reductase SDR XM56_05290 IPR020904 Short-chain dehydrogenase/reductase, conserved site XM56_05290 IPR036291 NAD(P)-binding domain superfamily XM56_05295 IPR013830 SGNH hydrolase-type esterase domain XM56_05295 IPR036514 SGNH hydrolase superfamily XM56_05295 IPR008265 Lipase, GDSL, active site XM56_05300 IPR003593 AAA+ ATPase domain XM56_05300 IPR003439 ABC transporter-like XM56_05300 IPR017871 ABC transporter, conserved site XM56_05300 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_05305 IPR038766 Membrane component of ABC transporter, predicted XM56_05310 IPR011761 ATP-grasp fold XM56_05310 IPR013815 ATP-grasp fold, subdomain 1 XM56_05310 IPR016185 Pre-ATP-grasp domain superfamily XM56_05310 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit XM56_05310 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain XM56_05310 IPR011054 Rudiment single hybrid motif XM56_05310 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type XM56_05315 IPR033747 Class I PurE XM56_05315 IPR000031 PurE domain XM56_05315 IPR024694 PurE, prokaryotic type XM56_05315 IPR035893 PurE domain superfamily XM56_05320 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type XM56_05320 IPR029052 Metallo-dependent phosphatase-like XM56_05320 IPR010138 UDP-2,3-diacylglucosamine hydrolase XM56_05325 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain XM56_05325 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site XM56_05325 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase XM56_05325 IPR029000 Cyclophilin-like domain superfamily XM56_05330 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding XM56_05330 IPR032678 tRNA synthetases class I, catalytic domain XM56_05330 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR XM56_05330 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XM56_05330 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase XM56_05330 IPR015803 Cysteine-tRNA ligase XM56_05335 IPR002942 RNA-binding S4 domain XM56_05335 IPR036986 RNA-binding S4 domain superfamily XM56_05340 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain XM56_05340 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site XM56_05340 IPR036291 NAD(P)-binding domain superfamily XM56_05340 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase XM56_05340 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain XM56_05355 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein XM56_05355 IPR001270 ClpA/B family XM56_05355 IPR003593 AAA+ ATPase domain XM56_05355 IPR002611 IstB-like ATP-binding protein XM56_05355 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_05360 IPR001584 Integrase, catalytic core XM56_05360 IPR017894 HTH domain, IS21 transposase-type XM56_05370 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_05370 IPR001867 OmpR/PhoB-type DNA-binding domain XM56_05370 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response XM56_05370 IPR001789 Signal transduction response regulator, receiver domain XM56_05370 IPR039420 Transcriptional regulatory protein WalR-like XM56_05370 IPR011006 CheY-like superfamily XM56_05390 IPR039994 JmjC domain-containing XM56_05390 IPR003347 JmjC domain XM56_05395 IPR001106 Aromatic amino acid lyase XM56_05395 IPR024083 Fumarase/histidase, N-terminal XM56_05395 IPR005921 Histidine ammonia-lyase XM56_05395 IPR008948 L-Aspartase-like XM56_05395 IPR022313 Phenylalanine/histidine ammonia-lyases, active site XM56_05400 IPR002830 UbiD decarboxylyase family XM56_05400 IPR032903 UbiD-like decarboxylase/ferulic acid decarboxylase 1 XM56_05405 IPR003439 ABC transporter-like XM56_05405 IPR003593 AAA+ ATPase domain XM56_05405 IPR011527 ABC transporter type 1, transmembrane domain XM56_05405 IPR036640 ABC transporter type 1, transmembrane domain superfamily XM56_05405 IPR017871 ABC transporter, conserved site XM56_05405 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_05405 IPR039421 Type I protein exporter XM56_05420 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase XM56_05420 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type XM56_05420 IPR029052 Metallo-dependent phosphatase-like XM56_05430 IPR016032 Signal transduction response regulator, C-terminal effector XM56_05430 IPR000792 Transcription regulator LuxR, C-terminal XM56_05435 IPR011129 Cold shock domain XM56_05435 IPR012340 Nucleic acid-binding, OB-fold XM56_05435 IPR002059 Cold-shock protein, DNA-binding XM56_05435 IPR019844 Cold-shock (CSD) domain XM56_05435 IPR012156 Cold shock, CspA XM56_05440 IPR012156 Cold shock, CspA XM56_05440 IPR002059 Cold-shock protein, DNA-binding XM56_05440 IPR011129 Cold shock domain XM56_05440 IPR012340 Nucleic acid-binding, OB-fold XM56_05440 IPR019844 Cold-shock (CSD) domain XM56_05445 IPR003691 Putative fluoride ion transporter CrcB XM56_05450 IPR007894 MASE2 XM56_05450 IPR029787 Nucleotide cyclase XM56_05450 IPR000160 GGDEF domain XM56_05455 IPR003369 Sec-independent protein translocase protein TatA/B/E XM56_05455 IPR024905 Sec-independent protein translocase protein TatE XM56_05455 IPR006312 Sec-independent protein translocase protein TatA/E XM56_05460 IPR003698 Lipoyl synthase XM56_05460 IPR007197 Radical SAM XM56_05460 IPR031691 Lipoyl synthase, N-terminal XM56_05460 IPR013785 Aldolase-type TIM barrel XM56_05460 IPR006638 Elp3/MiaB/NifB XM56_05465 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain XM56_05465 IPR020605 Octanoyltransferase, conserved site XM56_05465 IPR000544 Octanoyltransferase XM56_05470 IPR027471 YbeD-like domain superfamily XM56_05470 IPR007454 Uncharacterised protein family UPF0250 XM56_05475 IPR012338 Beta-lactamase/transpeptidase-like XM56_05475 IPR015956 Penicillin-binding protein, C-terminal domain superfamily XM56_05475 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A XM56_05475 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal XM56_05475 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily XM56_05475 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal XM56_05480 IPR009009 RlpA-like protein, double-psi beta-barrel domain XM56_05480 IPR036908 RlpA-like domain superfamily XM56_05480 IPR007730 Sporulation-like domain XM56_05480 IPR036680 Sporulation-like domain superfamily XM56_05480 IPR012997 Rare lipoprotein A XM56_05480 IPR034718 Endolytic peptidoglycan transglycosylase RlpA XM56_05485 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB XM56_05485 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA XM56_05485 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site XM56_05490 IPR012338 Beta-lactamase/transpeptidase-like XM56_05490 IPR005311 Penicillin-binding protein, dimerisation domain XM56_05490 IPR036138 Penicillin-binding protein, dimerisation domain superfamily XM56_05490 IPR001460 Penicillin-binding protein, transpeptidase XM56_05490 IPR017790 Penicillin-binding protein 2 XM56_05495 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal XM56_05495 IPR003742 RNA methyltransferase RlmH XM56_05495 IPR029028 Alpha/beta knot methyltransferases XM56_05500 IPR004394 Protein Iojap/ribosomal silencing factor RsfS XM56_05505 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XM56_05505 IPR004821 Cytidyltransferase-like domain XM56_05505 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase XM56_05510 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal XM56_05510 IPR005790 DNA polymerase III, delta subunit XM56_05510 IPR010372 DNA polymerase III delta, N-terminal XM56_05510 IPR032780 DNA polymerase III subunit delta, C-terminal XM56_05510 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_05515 IPR007485 LPS-assembly lipoprotein LptE XM56_05520 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding XM56_05520 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XM56_05520 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding XM56_05520 IPR025709 Leucyl-tRNA synthetase, editing domain XM56_05520 IPR002302 Leucine-tRNA ligase XM56_05520 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain XM56_05520 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site XM56_05520 IPR002300 Aminoacyl-tRNA synthetase, class Ia XM56_05525 IPR009912 Zinc-ribbon containing domain XM56_05530 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_05530 IPR017871 ABC transporter, conserved site XM56_05530 IPR003439 ABC transporter-like XM56_05530 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type XM56_05530 IPR003593 AAA+ ATPase domain XM56_05535 IPR035906 MetI-like superfamily XM56_05535 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain XM56_05535 IPR000515 ABC transporter type 1, transmembrane domain MetI-like XM56_05535 IPR030205 Glutamate/aspartate transport system permease protein GltK/AatM XM56_05540 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain XM56_05540 IPR000515 ABC transporter type 1, transmembrane domain MetI-like XM56_05540 IPR035906 MetI-like superfamily XM56_05540 IPR030202 Glutamate/aspartate transport system permease protein GltJ/AatQ XM56_05545 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF XM56_05555 IPR004563 Apolipoprotein N-acyltransferase XM56_05555 IPR036526 Carbon-nitrogen hydrolase superfamily XM56_05555 IPR003010 Carbon-nitrogen hydrolase XM56_05560 IPR016169 FAD-binding, type PCMH, subdomain 2 XM56_05560 IPR036318 FAD-binding, type PCMH-like superfamily XM56_05560 IPR000644 CBS domain XM56_05560 IPR005170 Transporter-associated domain XM56_05565 IPR002036 Endoribonuclease YbeY XM56_05565 IPR020549 Endoribonuclease YbeY, conserved site XM56_05565 IPR023091 Metalloprotease catalytic domain superfamily, predicted XM56_05570 IPR003714 PhoH-like protein XM56_05570 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_05575 IPR002792 TRAM domain XM56_05575 IPR023404 Radical SAM, alpha/beta horseshoe XM56_05575 IPR006638 Elp3/MiaB/NifB XM56_05575 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB XM56_05575 IPR007197 Radical SAM XM56_05575 IPR020612 Methylthiotransferase, conserved site XM56_05575 IPR013848 Methylthiotransferase, N-terminal XM56_05575 IPR038135 Methylthiotransferase, N-terminal domain superfamily XM56_05575 IPR005839 Methylthiotransferase XM56_05580 IPR002938 FAD-binding domain XM56_05580 IPR036188 FAD/NAD(P)-binding domain superfamily XM56_05580 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 XM56_05580 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site XM56_05595 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XM56_05595 IPR006426 Asparagine synthase, glutamine-hydrolyzing XM56_05595 IPR033738 Asparagine synthase, N-terminal domain XM56_05595 IPR017932 Glutamine amidotransferase type 2 domain XM56_05595 IPR001962 Asparagine synthase XM56_05595 IPR029055 Nucleophile aminohydrolases, N-terminal XM56_05600 IPR036412 HAD-like superfamily XM56_05600 IPR006357 HAD-superfamily hydrolase, subfamily IIA XM56_05600 IPR023214 HAD superfamily XM56_05605 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_05605 IPR000600 ROK family XM56_05605 IPR036390 Winged helix DNA-binding domain superfamily XM56_05605 IPR000835 MarR-type HTH domain XM56_05610 IPR003764 N-acetylglucosamine-6-phosphate deacetylase XM56_05610 IPR032466 Metal-dependent hydrolase XM56_05610 IPR011059 Metal-dependent hydrolase, composite domain superfamily XM56_05610 IPR006680 Amidohydrolase-related XM56_05615 IPR037171 NagB/RpiA transferase-like XM56_05615 IPR004547 Glucosamine-6-phosphate isomerase XM56_05615 IPR018321 Glucosamine-6-phosphate isomerase, conserved site XM56_05615 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase XM56_05620 IPR011055 Duplicated hybrid motif XM56_05620 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component XM56_05620 IPR013013 Phosphotransferase system, EIIC component, type 1 XM56_05620 IPR001996 Phosphotransferase system, IIB component, type 1 XM56_05620 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site XM56_05620 IPR036878 Glucose permease domain IIB XM56_05620 IPR003352 Phosphotransferase system, EIIC XM56_05620 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 XM56_05625 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily XM56_05625 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal XM56_05625 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XM56_05625 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain XM56_05625 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain XM56_05625 IPR000924 Glutamyl/glutaminyl-tRNA synthetase XM56_05625 IPR022861 Glutamine-tRNA ligase, bacterial XM56_05625 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily XM56_05625 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site XM56_05625 IPR004514 Glutamine-tRNA synthetase XM56_05630 IPR005318 Outer membrane porin, bacterial XM56_05630 IPR023614 Porin domain superfamily XM56_05635 IPR025727 YbfN-like lipoprotein XM56_05645 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_05645 IPR036390 Winged helix DNA-binding domain superfamily XM56_05645 IPR002481 Ferric-uptake regulator XM56_05650 IPR008254 Flavodoxin/nitric oxide synthase XM56_05650 IPR001226 Flavodoxin, conserved site XM56_05650 IPR010086 Flavodoxin, long chain XM56_05650 IPR029039 Flavoprotein-like superfamily XM56_05655 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding XM56_05655 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain XM56_05655 IPR004090 Chemotaxis methyl-accepting receptor XM56_05655 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site XM56_05655 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily XM56_05655 IPR003660 HAMP domain XM56_05660 IPR002145 Ribbon-helix-helix protein, CopG XM56_05660 IPR010985 Ribbon-helix-helix XM56_05665 IPR029058 Alpha/Beta hydrolase fold XM56_05665 IPR000073 Alpha/beta hydrolase fold-1 XM56_05670 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain XM56_05670 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily XM56_05670 IPR013321 Arc-type ribbon-helix-helix XM56_05670 IPR010985 Ribbon-helix-helix XM56_05670 IPR005621 Negative modulator of initiation of replication SeqA XM56_05670 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal XM56_05675 IPR005852 Phosphoglucomutase, alpha-D-glucose specific XM56_05675 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II XM56_05675 IPR016066 Alpha-D-phosphohexomutase, conserved site XM56_05675 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily XM56_05675 IPR005843 Alpha-D-phosphohexomutase, C-terminal XM56_05675 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I XM56_05675 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III XM56_05675 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III XM56_05685 IPR000620 EamA domain XM56_05690 IPR011006 CheY-like superfamily XM56_05690 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_05690 IPR001867 OmpR/PhoB-type DNA-binding domain XM56_05690 IPR039420 Transcriptional regulatory protein WalR-like XM56_05690 IPR001789 Signal transduction response regulator, receiver domain XM56_05695 IPR005467 Histidine kinase domain XM56_05695 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal XM56_05695 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XM56_05695 IPR003594 Histidine kinase/HSP90-like ATPase XM56_05695 IPR029016 GAF-like domain superfamily XM56_05695 IPR003018 GAF domain XM56_05695 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily XM56_05695 IPR038318 KdpD, transmembrane domain superfamily XM56_05695 IPR025201 Sensor protein KdpD, transmembrane domain XM56_05695 IPR004358 Signal transduction histidine kinase-related protein, C-terminal XM56_05695 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain XM56_05700 IPR003820 Potassium-transporting ATPase C chain XM56_05705 IPR018303 P-type ATPase, phosphorylation site XM56_05705 IPR036412 HAD-like superfamily XM56_05705 IPR023299 P-type ATPase, cytoplasmic domain N XM56_05705 IPR006391 P-type ATPase, B chain, subfamily IA XM56_05705 IPR001757 P-type ATPase XM56_05705 IPR008250 P-type ATPase, A domain superfamily XM56_05705 IPR023298 P-type ATPase, transmembrane domain superfamily XM56_05710 IPR004623 Potassium-transporting ATPase A chain XM56_05715 IPR011726 K+ transporting P-type ATPase, F subunit XM56_05720 IPR019663 Uncharacterised protein YbfA XM56_05730 IPR003996 RTX toxin-activating protein C, bacteria XM56_05735 IPR020974 CGT/MARTX, cysteine protease (CPD) domain XM56_05735 IPR038383 CGT/MARTX, cysteine protease (CPD) domain superfamily XM56_05735 IPR020972 Dermonecrotic/RTX toxin, membrane localization domain XM56_05735 IPR011049 Serralysin-like metalloprotease, C-terminal XM56_05735 IPR022742 Serine aminopeptidase, S33 XM56_05735 IPR011509 RtxA toxin XM56_05735 IPR011049 Serralysin-like metalloprotease, C-terminal XM56_05735 IPR011509 RtxA toxin XM56_05735 IPR022742 Serine aminopeptidase, S33 XM56_05735 IPR038383 CGT/MARTX, cysteine protease (CPD) domain superfamily XM56_05735 IPR020974 CGT/MARTX, cysteine protease (CPD) domain XM56_05735 IPR020972 Dermonecrotic/RTX toxin, membrane localization domain XM56_05735 IPR029058 Alpha/Beta hydrolase fold XM56_05735 IPR032074 Actin cross-linking domain XM56_05735 IPR029058 Alpha/Beta hydrolase fold XM56_05735 IPR032074 Actin cross-linking domain XM56_05740 IPR013560 Domain of unknown function DUF1722 XM56_05745 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily XM56_05745 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XM56_05745 IPR006050 DNA photolyase, N-terminal XM56_05745 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal XM56_05745 IPR002081 Cryptochrome/DNA photolyase class 1 XM56_05745 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain XM56_05745 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily XM56_05750 IPR024225 Cyclic-AMP phosphodiesterase class-II, conserved site XM56_05750 IPR000396 Cyclic-AMP phosphodiesterase, class-II XM56_05750 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like XM56_05755 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 XM56_05755 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily XM56_05760 IPR029000 Cyclophilin-like domain superfamily XM56_05760 IPR003833 Carboxyltransferase domain, subdomain C and D XM56_05760 IPR010016 KipI family XM56_05765 IPR029000 Cyclophilin-like domain superfamily XM56_05765 IPR003778 Carboxyltransferase domain, subdomain A and B XM56_05770 IPR005501 LamB/YcsF/PxpA-like XM56_05770 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel XM56_05785 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily XM56_05785 IPR029762 Pyroglutamyl peptidase I, bacterial-type XM56_05785 IPR033694 Pyroglutamyl peptidase I, Cys active site XM56_05785 IPR033693 Pyroglutamyl peptidase I, Glu active site XM56_05785 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like XM56_05785 IPR000816 Peptidase C15, pyroglutamyl peptidase I XM56_05790 IPR016142 Citrate synthase-like, large alpha subdomain XM56_05790 IPR010953 Citrate synthase, type I XM56_05790 IPR036969 Citrate synthase superfamily XM56_05790 IPR024176 Citrate synthase, bacterial-type XM56_05790 IPR019810 Citrate synthase active site XM56_05790 IPR002020 Citrate synthase XM56_05790 IPR016143 Citrate synthase-like, small alpha subdomain XM56_05795 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit XM56_05795 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site XM56_05795 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit XM56_05795 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit XM56_05800 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit XM56_05800 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor XM56_05800 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit XM56_05805 IPR036188 FAD/NAD(P)-binding domain superfamily XM56_05805 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit XM56_05805 IPR011281 Succinate dehydrogenase, flavoprotein subunit XM56_05805 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily XM56_05805 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site XM56_05805 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily XM56_05805 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain XM56_05805 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal XM56_05810 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site XM56_05810 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal XM56_05810 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein XM56_05810 IPR012675 Beta-grasp domain superfamily XM56_05810 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain XM56_05810 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain XM56_05810 IPR036010 2Fe-2S ferredoxin-like superfamily XM56_05810 IPR009051 Alpha-helical ferredoxin XM56_05815 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain XM56_05815 IPR011603 2-oxoglutarate dehydrogenase E1 component XM56_05815 IPR001017 Dehydrogenase, E1 component XM56_05815 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal XM56_05815 IPR005475 Transketolase-like, pyrimidine-binding domain XM56_05815 IPR029061 Thiamin diphosphate-binding fold XM56_05815 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily XM56_05820 IPR004167 Peripheral subunit-binding domain XM56_05820 IPR036625 E3-binding domain superfamily XM56_05820 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily XM56_05820 IPR000089 Biotin/lipoyl attachment XM56_05820 IPR011053 Single hybrid motif XM56_05820 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain XM56_05820 IPR006255 Dihydrolipoamide succinyltransferase XM56_05820 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site XM56_05825 IPR013815 ATP-grasp fold, subdomain 1 XM56_05825 IPR005811 ATP-citrate lyase/succinyl-CoA ligase XM56_05825 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site XM56_05825 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type XM56_05825 IPR005809 Succinate--CoA synthetase, beta subunit XM56_05825 IPR011761 ATP-grasp fold XM56_05825 IPR016102 Succinyl-CoA synthetase-like XM56_05830 IPR016102 Succinyl-CoA synthetase-like XM56_05830 IPR036291 NAD(P)-binding domain superfamily XM56_05830 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site XM56_05830 IPR003781 CoA-binding XM56_05830 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site XM56_05830 IPR005810 Succinyl-CoA ligase, alpha subunit XM56_05830 IPR005811 ATP-citrate lyase/succinyl-CoA ligase XM56_05840 IPR008334 5'-Nucleotidase, C-terminal XM56_05840 IPR036907 5'-Nucleotidase, C-terminal domain superfamily XM56_05840 IPR006146 5'-Nucleotidase, conserved site XM56_05840 IPR006179 5'-Nucleotidase/apyrase XM56_05840 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type XM56_05840 IPR041827 CpdB, N-terminal metallophosphatase domain XM56_05840 IPR019931 LPXTG cell wall anchor domain XM56_05840 IPR029052 Metallo-dependent phosphatase-like XM56_05845 IPR002585 Cytochrome ubiquinol oxidase subunit 1 XM56_05850 IPR003317 Cytochrome ubiquinol oxidase subunit 2 XM56_05855 IPR011724 Cyd operon protein YbgT XM56_05855 IPR012994 Membrane bound YbgT-like XM56_05860 IPR011846 Cyd operon protein YbgE XM56_05865 IPR006683 Thioesterase domain XM56_05865 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family XM56_05865 IPR029069 HotDog domain superfamily XM56_05865 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase XM56_05865 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site XM56_05870 IPR014163 Tol-Pal system, TolQ XM56_05870 IPR002898 MotA/TolQ/ExbB proton channel XM56_05875 IPR014168 Tol-Pal system protein TolR XM56_05875 IPR003400 Biopolymer transport protein ExbD/TolR XM56_05880 IPR014161 Tol-Pal system, TolA XM56_05880 IPR014161 Tol-Pal system, TolA XM56_05885 IPR007195 TolB, N-terminal XM56_05885 IPR014167 Tol-Pal system protein TolB XM56_05885 IPR011659 WD40-like Beta Propeller XM56_05885 IPR036752 TolB, N-terminal domain superfamily XM56_05885 IPR011042 Six-bladed beta-propeller, TolB-like XM56_05890 IPR006690 Outer membrane protein, OmpA-like, conserved site XM56_05890 IPR036737 OmpA-like domain superfamily XM56_05890 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal XM56_05890 IPR006664 Outer membrane protein, bacterial XM56_05890 IPR006665 OmpA-like domain XM56_05890 IPR039001 Peptidoglycan-associated lipoprotein XM56_05895 IPR034706 Cell division coordinator CpoB XM56_05895 IPR019734 Tetratricopeptide repeat XM56_05895 IPR011990 Tetratricopeptide-like helical domain superfamily XM56_05895 IPR013026 Tetratricopeptide repeat-containing domain XM56_05895 IPR014162 Cell division coordinator CpoB, C-terminal XM56_05895 IPR032519 YbgF, trimerisation domain XM56_05905 IPR013762 Integrase-like, catalytic domain superfamily XM56_05905 IPR011010 DNA breaking-rejoining enzyme, catalytic core XM56_05905 IPR010998 Integrase/recombinase, N-terminal XM56_05905 IPR002104 Integrase, catalytic domain XM56_05910 IPR023513 Quinolinate synthase A, type 1 XM56_05910 IPR036094 Quinolinate synthetase A superfamily XM56_05910 IPR003473 Quinolinate synthetase A XM56_05915 IPR006419 Nicotinamide mononucleotide transporter PnuC XM56_05920 IPR002524 Cation efflux protein XM56_05920 IPR023500 Zinc transporter ZitB XM56_05920 IPR027469 Cation efflux transmembrane domain superfamily XM56_05920 IPR036837 Cation efflux protein, cytoplasmic domain superfamily XM56_05925 IPR013785 Aldolase-type TIM barrel XM56_05925 IPR006218 DAHP synthetase I/KDSA XM56_05925 IPR006219 DHAP synthase, class 1 XM56_05930 IPR029033 Histidine phosphatase superfamily XM56_05930 IPR005952 Phosphoglycerate mutase 1 XM56_05930 IPR013078 Histidine phosphatase superfamily, clade-1 XM56_05930 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site XM56_05935 IPR018524 DNA/RNA non-specific endonuclease, active site XM56_05935 IPR020821 Extracellular Endonuclease, subunit A XM56_05935 IPR040255 Non-specific endonuclease XM56_05935 IPR001604 DNA/RNA non-specific endonuclease XM56_05945 IPR008357 Lantibiotic leader peptide-processing serine protease XM56_05945 IPR000209 Peptidase S8/S53 domain XM56_05945 IPR036852 Peptidase S8/S53 domain superfamily XM56_05945 IPR023827 Peptidase S8, subtilisin, Asp-active site XM56_05945 IPR022398 Peptidase S8, subtilisin, His-active site XM56_05945 IPR023828 Peptidase S8, subtilisin, Ser-active site XM56_05945 IPR015500 Peptidase S8, subtilisin-related XM56_05945 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily XM56_05955 IPR013458 Aldose 1-epimerase, bacterial XM56_05955 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase XM56_05955 IPR011013 Galactose mutarotase-like domain superfamily XM56_05955 IPR014718 Glycoside hydrolase-type carbohydrate-binding XM56_05955 IPR018052 Aldose 1-epimerase, conserved site XM56_05955 IPR015443 Aldose 1-epimerase XM56_05960 IPR036554 GHMP kinase, C-terminal domain superfamily XM56_05960 IPR000705 Galactokinase XM56_05960 IPR022963 Galactokinase, bacterial XM56_05960 IPR019741 Galactokinase, conserved site XM56_05960 IPR019539 Galactokinase galactose-binding domain XM56_05960 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup XM56_05960 IPR020568 Ribosomal protein S5 domain 2-type fold XM56_05960 IPR006206 Mevalonate/galactokinase XM56_05960 IPR006203 GHMP kinase, ATP-binding, conserved site XM56_05960 IPR013750 GHMP kinase, C-terminal domain XM56_05960 IPR006204 GHMP kinase N-terminal domain XM56_05965 IPR036265 HIT-like superfamily XM56_05965 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal XM56_05965 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal XM56_05965 IPR001937 Galactose-1-phosphate uridyl transferase, class I XM56_05965 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site XM56_05970 IPR005886 UDP-glucose 4-epimerase XM56_05970 IPR036291 NAD(P)-binding domain superfamily XM56_05970 IPR016040 NAD(P)-binding domain XM56_05980 IPR003439 ABC transporter-like XM56_05980 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_05980 IPR003593 AAA+ ATPase domain XM56_05985 IPR003725 Molybdenum-binding protein ModE, N-terminal XM56_05985 IPR036390 Winged helix DNA-binding domain superfamily XM56_05985 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_05985 IPR000847 Transcription regulator HTH, LysR XM56_05985 IPR005116 Transport-associated OB, type 1 XM56_05985 IPR004606 Molybdenum-pterin binding XM56_05985 IPR008995 Molybdate/tungstate binding, C-terminal XM56_05985 IPR016462 Molybdate-dependent transcriptional regulator ModE XM56_05990 IPR019702 Multidrug efflux pump accessory protein AcrZ XM56_05995 IPR005950 Molybdate ABC transporter, substrate-binding protein XM56_06000 IPR025166 Integrase, DNA-binding domain XM56_06000 IPR010998 Integrase/recombinase, N-terminal XM56_06000 IPR013762 Integrase-like, catalytic domain superfamily XM56_06000 IPR011010 DNA breaking-rejoining enzyme, catalytic core XM56_06000 IPR038488 Integrase, DNA-binding domain superfamily XM56_06000 IPR002104 Integrase, catalytic domain XM56_06180 IPR034690 Endolysin T4 type XM56_06180 IPR002196 Glycoside hydrolase, family 24 XM56_06180 IPR023346 Lysozyme-like domain superfamily XM56_06190 IPR011867 Molybdate ABC transporter, permease protein XM56_06190 IPR000515 ABC transporter type 1, transmembrane domain MetI-like XM56_06190 IPR035906 MetI-like superfamily XM56_06195 IPR004606 Molybdenum-pterin binding XM56_06195 IPR003593 AAA+ ATPase domain XM56_06195 IPR005116 Transport-associated OB, type 1 XM56_06195 IPR011868 Molybdate ABC transporter, ATP-binding protein XM56_06195 IPR015852 ABC transporter, molybdenum import, ModC XM56_06195 IPR017871 ABC transporter, conserved site XM56_06195 IPR003439 ABC transporter-like XM56_06195 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_06195 IPR008995 Molybdate/tungstate binding, C-terminal XM56_06200 IPR000150 Cof family XM56_06200 IPR023214 HAD superfamily XM56_06200 IPR006379 HAD-superfamily hydrolase, subfamily IIB XM56_06200 IPR036412 HAD-like superfamily XM56_06205 IPR019405 Lactonase, 7-bladed beta propeller XM56_06205 IPR022528 6-phosphogluconolactonase, YbhE-type XM56_06205 IPR011045 Nitrous oxide reductase, N-terminal XM56_06205 IPR015943 WD40/YVTN repeat-like-containing domain superfamily XM56_06210 IPR015421 Pyridoxal phosphate-dependent transferase, major domain XM56_06210 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 XM56_06210 IPR015424 Pyridoxal phosphate-dependent transferase XM56_06210 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA XM56_06210 IPR005814 Aminotransferase class-III XM56_06215 IPR024177 Biotin synthase XM56_06215 IPR013785 Aldolase-type TIM barrel XM56_06215 IPR010722 Biotin and thiamin synthesis-associated domain XM56_06215 IPR007197 Radical SAM XM56_06215 IPR006638 Elp3/MiaB/NifB XM56_06215 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB XM56_06220 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site XM56_06220 IPR004839 Aminotransferase, class I/classII XM56_06220 IPR015421 Pyridoxal phosphate-dependent transferase, major domain XM56_06220 IPR015424 Pyridoxal phosphate-dependent transferase XM56_06220 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type XM56_06220 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria XM56_06220 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 XM56_06225 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC XM56_06225 IPR013216 Methyltransferase type 11 XM56_06225 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XM56_06230 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_06230 IPR004472 Dethiobiotin synthase BioD XM56_06235 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_06235 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type XM56_06235 IPR003439 ABC transporter-like XM56_06235 IPR017871 ABC transporter, conserved site XM56_06235 IPR003593 AAA+ ATPase domain XM56_06240 IPR001650 Helicase, C-terminal XM56_06240 IPR036876 UVR domain superfamily XM56_06240 IPR004807 UvrABC system, subunit B XM56_06240 IPR006935 Helicase/UvrB, N-terminal XM56_06240 IPR014001 Helicase superfamily 1/2, ATP-binding domain XM56_06240 IPR024759 UvrB, YAD/RRR-motif-containing domain XM56_06240 IPR001943 UVR domain XM56_06240 IPR041471 UvrB, interaction domain XM56_06240 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_06245 IPR036361 SAP domain superfamily XM56_06245 IPR018668 DNA-binding protein VF530-like XM56_06250 IPR038136 Gluconeogenesis factor superfamily XM56_06250 IPR010119 Gluconeogenesis factor XM56_06250 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 XM56_06255 IPR007197 Radical SAM XM56_06255 IPR010505 Molybdenum cofactor synthesis C-terminal XM56_06255 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site XM56_06255 IPR013483 Molybdenum cofactor biosynthesis protein A XM56_06255 IPR013785 Aldolase-type TIM barrel XM56_06255 IPR006638 Elp3/MiaB/NifB XM56_06260 IPR023045 Molybdenum cofactor biosynthesis C XM56_06260 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily XM56_06260 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain XM56_06265 IPR003749 Sulfur carrier ThiS/MoaD-like XM56_06265 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp XM56_06265 IPR012675 Beta-grasp domain superfamily XM56_06270 IPR003448 Molybdopterin biosynthesis MoaE XM56_06270 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily XM56_06275 IPR006214 Bax inhibitor 1-related XM56_06280 IPR000412 ABC-2 transporter XM56_06285 IPR000412 ABC-2 transporter XM56_06290 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_06290 IPR003593 AAA+ ATPase domain XM56_06290 IPR017871 ABC transporter, conserved site XM56_06290 IPR003439 ABC transporter-like XM56_06295 IPR022936 Uncharacterised protein family UPF0194, membrane protein YbhG XM56_06295 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain XM56_06300 IPR023772 DNA-binding HTH domain, TetR-type, conserved site XM56_06300 IPR009057 Homeobox-like domain superfamily XM56_06300 IPR001647 DNA-binding HTH domain, TetR-type XM56_06300 IPR015292 Transcription regulator YbiH, C-terminal XM56_06300 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily XM56_06305 IPR011545 DEAD/DEAH box helicase domain XM56_06305 IPR028622 ATP-dependent RNA helicase RhlE XM56_06305 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_06305 IPR001650 Helicase, C-terminal XM56_06305 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site XM56_06305 IPR014001 Helicase superfamily 1/2, ATP-binding domain XM56_06305 IPR014014 RNA helicase, DEAD-box type, Q motif XM56_06310 IPR013785 Aldolase-type TIM barrel XM56_06310 IPR032886 tRNA-dihydrouridine(16) synthase XM56_06310 IPR042270 tRNA-dihydrouridine(16) synthase, C-terminal XM56_06310 IPR001269 tRNA-dihydrouridine synthase XM56_06310 IPR035587 DUS-like, FMN-binding domain XM56_06310 IPR018517 tRNA-dihydrouridine synthase, conserved site XM56_06320 IPR000644 CBS domain XM56_06320 IPR038076 MgtE, N-terminal domain superfamily XM56_06320 IPR006667 SLC41 divalent cation transporters, integral membrane domain XM56_06320 IPR006669 Magnesium transporter MgtE XM56_06320 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily XM56_06320 IPR038048 Magnesium transporter MgtE, transmembrane domain XM56_06320 IPR006668 Magnesium transporter, MgtE intracellular domain XM56_06330 IPR012338 Beta-lactamase/transpeptidase-like XM56_06330 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A XM56_06330 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal XM56_06335 IPR012256 D-lactate dehydrogenase XM56_06335 IPR006094 FAD linked oxidase, N-terminal XM56_06335 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal XM56_06335 IPR016164 FAD-linked oxidase-like, C-terminal XM56_06335 IPR016166 FAD-binding domain, PCMH-type XM56_06335 IPR016169 FAD-binding, type PCMH, subdomain 2 XM56_06335 IPR016167 FAD-binding, type PCMH, subdomain 1 XM56_06335 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 XM56_06335 IPR036318 FAD-binding, type PCMH-like superfamily XM56_06335 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 XM56_06340 IPR033469 CYTH-like domain superfamily XM56_06340 IPR008173 Adenylyl cyclase CyaB XM56_06340 IPR023577 CYTH domain XM56_06345 IPR002711 HNH endonuclease XM56_06345 IPR003615 HNH nuclease XM56_06355 IPR007341 Transglycosylase-associated protein XM56_06360 IPR012693 ABC transporter, phosphonate import, PhnC XM56_06360 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_06360 IPR003593 AAA+ ATPase domain XM56_06360 IPR003439 ABC transporter-like XM56_06360 IPR017871 ABC transporter, conserved site XM56_06365 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein XM56_06365 IPR017797 Phosphonate ABC transporter, substrate-binding protein XM56_06370 IPR005769 ABC transporter, permease PhnE/PtxC XM56_06370 IPR035906 MetI-like superfamily XM56_06370 IPR000515 ABC transporter type 1, transmembrane domain MetI-like XM56_06375 IPR005769 ABC transporter, permease PhnE/PtxC XM56_06375 IPR035906 MetI-like superfamily XM56_06375 IPR000515 ABC transporter type 1, transmembrane domain MetI-like XM56_06380 IPR009921 Domain of unknown function DUF1456 XM56_06390 IPR001851 ABC transporter, permease XM56_06395 IPR001851 ABC transporter, permease XM56_06400 IPR003593 AAA+ ATPase domain XM56_06400 IPR003439 ABC transporter-like XM56_06400 IPR017871 ABC transporter, conserved site XM56_06400 IPR012693 ABC transporter, phosphonate import, PhnC XM56_06400 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_06405 IPR003439 ABC transporter-like XM56_06405 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein XM56_06405 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_06405 IPR017871 ABC transporter, conserved site XM56_06405 IPR003593 AAA+ ATPase domain XM56_06410 IPR001763 Rhodanese-like domain XM56_06410 IPR001307 Thiosulphate sulfurtransferase, conserved site XM56_06410 IPR036873 Rhodanese-like domain superfamily XM56_06415 IPR004104 Oxidoreductase, C-terminal XM56_06415 IPR023794 Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase XM56_06415 IPR000683 Oxidoreductase, N-terminal XM56_06415 IPR036291 NAD(P)-binding domain superfamily XM56_06425 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain XM56_06430 IPR035906 MetI-like superfamily XM56_06430 IPR000515 ABC transporter type 1, transmembrane domain MetI-like XM56_06435 IPR003439 ABC transporter-like XM56_06435 IPR017871 ABC transporter, conserved site XM56_06435 IPR003593 AAA+ ATPase domain XM56_06435 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_06440 IPR035906 MetI-like superfamily XM56_06440 IPR000515 ABC transporter type 1, transmembrane domain MetI-like XM56_06450 IPR036291 NAD(P)-binding domain superfamily XM56_06450 IPR002347 Short-chain dehydrogenase/reductase SDR XM56_06450 IPR020904 Short-chain dehydrogenase/reductase, conserved site XM56_06455 IPR005119 LysR, substrate-binding XM56_06455 IPR036390 Winged helix DNA-binding domain superfamily XM56_06455 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_06455 IPR000847 Transcription regulator HTH, LysR XM56_06465 IPR004779 Carboxylate/Amino Acid/Amine Transporter XM56_06465 IPR000620 EamA domain XM56_06475 IPR033900 Porin domain, Gram-negative type XM56_06475 IPR023614 Porin domain superfamily XM56_06475 IPR001702 Porin, Gram-negative type XM56_06475 IPR001897 Porin, gammaproteobacterial XM56_06475 IPR013793 Porin, Gram-negative type, conserved site XM56_06480 IPR006554 Helicase-like, DEXD box c2 type XM56_06480 IPR039000 ATP-dependent DNA helicase DinG XM56_06480 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_06480 IPR001650 Helicase, C-terminal XM56_06480 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type XM56_06480 IPR014001 Helicase superfamily 1/2, ATP-binding domain XM56_06480 IPR006555 ATP-dependent helicase, C-terminal XM56_06480 IPR010614 DEAD2 XM56_06485 IPR034294 Aquaporin transporter XM56_06485 IPR023743 Aquaporin Z XM56_06485 IPR023271 Aquaporin-like XM56_06485 IPR000425 Major intrinsic protein XM56_06485 IPR022357 Major intrinsic protein, conserved site XM56_06490 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily XM56_06490 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily XM56_06490 IPR017459 Glycosyl transferase family 3, N-terminal domain XM56_06510 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XM56_06510 IPR016909 Ribosomal RNA large subunit methyltransferase F XM56_06510 IPR010286 METTL16/RlmF family XM56_06515 IPR035965 PAS domain superfamily XM56_06515 IPR000700 PAS-associated, C-terminal XM56_06515 IPR000014 PAS domain XM56_06515 IPR001610 PAC motif XM56_06515 IPR013655 PAS fold-3 XM56_06515 IPR004090 Chemotaxis methyl-accepting receptor XM56_06515 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain XM56_06520 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_06520 IPR003593 AAA+ ATPase domain XM56_06520 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type XM56_06520 IPR017871 ABC transporter, conserved site XM56_06520 IPR003439 ABC transporter-like XM56_06525 IPR000515 ABC transporter type 1, transmembrane domain MetI-like XM56_06525 IPR035906 MetI-like superfamily XM56_06525 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain XM56_06530 IPR018313 Solute-binding protein family 3, conserved site XM56_06530 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF XM56_06530 IPR001320 Ionotropic glutamate receptor XM56_06535 IPR000962 Zinc finger, DksA/TraR C4-type XM56_06535 IPR020458 Zinc finger, DksA/TraR C4-type conserved site XM56_06535 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria XM56_06540 IPR008331 Ferritin/DPS protein domain XM56_06540 IPR012347 Ferritin-like XM56_06540 IPR023067 DNA protection during starvation protein, gammaproteobacteria XM56_06540 IPR023188 DNA-binding protein Dps, conserved site XM56_06540 IPR002177 DNA-binding protein Dps XM56_06540 IPR009078 Ferritin-like superfamily XM56_06545 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XM56_06545 IPR023506 Trans-aconitate 2-methyltransferase XM56_06545 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal XM56_06545 IPR025714 Methyltransferase domain XM56_06560 IPR000782 FAS1 domain XM56_06560 IPR036378 FAS1 domain superfamily XM56_06570 IPR000620 EamA domain XM56_06580 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel XM56_06580 IPR027385 Outer membrane protein beta-barrel domain XM56_06580 IPR000758 Virulence-related outer membrane protein XM56_06600 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_06600 IPR003439 ABC transporter-like XM56_06600 IPR032781 ABC-transporter extension domain XM56_06600 IPR003593 AAA+ ATPase domain XM56_06610 IPR012730 Molybdopterin synthase sulfurylase MoeB XM56_06610 IPR000594 THIF-type NAD/FAD binding fold XM56_06610 IPR035985 Ubiquitin-activating enzyme XM56_06615 IPR005110 MoeA, N-terminal and linker domain XM56_06615 IPR005111 MoeA, C-terminal, domain IV XM56_06615 IPR036688 MoeA, C-terminal, domain IV superfamily XM56_06615 IPR036135 MoeA, N-terminal and linker domain superfamily XM56_06615 IPR008284 Molybdenum cofactor biosynthesis, conserved site XM56_06615 IPR001453 MoaB/Mog domain XM56_06615 IPR038987 Molybdopterin biosynthesis protein MoeA-like XM56_06615 IPR036425 MoaB/Mog-like domain superfamily XM56_06630 IPR003439 ABC transporter-like XM56_06630 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_06630 IPR025857 MacB-like periplasmic core domain XM56_06630 IPR017911 ABC transporter, macrolide export, ATP-binding domain XM56_06630 IPR017871 ABC transporter, conserved site XM56_06630 IPR003838 ABC transporter permease protein domain XM56_06630 IPR003593 AAA+ ATPase domain XM56_06650 IPR014186 S-formylglutathione hydrolase XM56_06650 IPR000801 Putative esterase XM56_06650 IPR029058 Alpha/Beta hydrolase fold XM56_06655 IPR014183 Alcohol dehydrogenase class III XM56_06655 IPR013149 Alcohol dehydrogenase, C-terminal XM56_06655 IPR011032 GroES-like superfamily XM56_06655 IPR036291 NAD(P)-binding domain superfamily XM56_06655 IPR020843 Polyketide synthase, enoylreductase domain XM56_06655 IPR013154 Alcohol dehydrogenase, N-terminal XM56_06655 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site XM56_06660 IPR036390 Winged helix DNA-binding domain superfamily XM56_06660 IPR000847 Transcription regulator HTH, LysR XM56_06660 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_06660 IPR005119 LysR, substrate-binding XM56_06665 IPR010645 Uncharacterised MFS-type transporter YbfB XM56_06665 IPR036259 MFS transporter superfamily XM56_06670 IPR018234 GTP cyclohydrolase I, conserved site XM56_06670 IPR020602 GTP cyclohydrolase I domain XM56_06670 IPR001474 GTP cyclohydrolase I XM56_06675 IPR007349 Domain of unknown function DUF418 XM56_06680 IPR000843 LacI-type HTH domain XM56_06680 IPR028082 Periplasmic binding protein-like I XM56_06680 IPR010982 Lambda repressor-like, DNA-binding domain superfamily XM56_06685 IPR025997 Periplasmic binding protein XM56_06685 IPR028082 Periplasmic binding protein-like I XM56_06690 IPR003593 AAA+ ATPase domain XM56_06690 IPR003439 ABC transporter-like XM56_06690 IPR017871 ABC transporter, conserved site XM56_06690 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_06690 IPR015862 ABC transporter, galactose import, MglA XM56_06695 IPR001851 ABC transporter, permease XM56_06695 IPR030158 Galactoside transport system permease protein MglC XM56_06700 IPR029016 GAF-like domain superfamily XM56_06700 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 XM56_06700 IPR002078 RNA polymerase sigma factor 54 interaction domain XM56_06700 IPR025944 Sigma-54 interaction domain, conserved site XM56_06700 IPR003593 AAA+ ATPase domain XM56_06700 IPR009057 Homeobox-like domain superfamily XM56_06700 IPR002197 DNA binding HTH domain, Fis-type XM56_06700 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_06700 IPR003018 GAF domain XM56_06705 IPR006657 Molybdopterin dinucleotide-binding domain XM56_06705 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site XM56_06705 IPR041924 Formate dehydrogenase H, N-terminal XM56_06705 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain XM56_06705 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site XM56_06705 IPR006478 Formate dehydrogenase, alpha subunit XM56_06705 IPR009010 Aspartate decarboxylase-like domain superfamily XM56_06705 IPR041925 Formate dehydrogenase H, molybdopterin-binding domain XM56_06705 IPR006656 Molybdopterin oxidoreductase XM56_06710 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site XM56_06710 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain XM56_06715 IPR023430 Peptidase HybD-like domain superfamily XM56_06715 IPR004420 Peptidase A31, hydrogenase maturation protease HycI XM56_06715 IPR000671 Peptidase A31 family XM56_06720 IPR010005 Formate hydrogenlyase maturation HycH XM56_06725 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit XM56_06725 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit XM56_06730 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain XM56_06730 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site XM56_06730 IPR010226 NADH-quinone oxidoreductase, chain I XM56_06735 IPR029014 [NiFe]-hydrogenase, large subunit XM56_06735 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily XM56_06735 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily XM56_06735 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit XM56_06735 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site XM56_06735 IPR001135 NADH-quinone oxidoreductase, subunit D XM56_06735 IPR001501 Nickel-dependent hydrogenase, large subunit XM56_06740 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal XM56_06740 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit XM56_06745 IPR038730 Hydrogenase-4 component E-like XM56_06745 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like XM56_06750 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit XM56_06750 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal XM56_06755 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H XM56_06755 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site XM56_06760 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit XM56_06760 IPR003918 NADH:ubiquinone oxidoreductase XM56_06765 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site XM56_06765 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain XM56_06770 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site XM56_06770 IPR000688 Hydrogenase maturation factor HypA/HybF XM56_06775 IPR037254 HupF/HypC superfamily XM56_06775 IPR019812 Hydrogenase assembly chaperone, conserved site XM56_06775 IPR001109 Hydrogenase expression/formation protein, HupF/HypC XM56_06780 IPR003848 Domain of unknown function DUF218 XM56_06780 IPR023604 Uncharacterised protein family SanA XM56_06785 IPR036291 NAD(P)-binding domain superfamily XM56_06785 IPR012301 Malic enzyme, N-terminal domain XM56_06785 IPR037062 Malic enzyme, N-terminal domain superfamily XM56_06785 IPR012302 Malic enzyme, NAD-binding XM56_06785 IPR023667 NAD-dependent malic enzyme, proteobacteria XM56_06785 IPR001891 Malic oxidoreductase XM56_06785 IPR015884 Malic enzyme, conserved site XM56_06795 IPR016192 APOBEC/CMP deaminase, zinc-binding XM56_06795 IPR016193 Cytidine deaminase-like XM56_06795 IPR006263 Cytidine deaminase, homodimeric XM56_06795 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain XM56_06795 IPR002125 Cytidine and deoxycytidylate deaminase domain XM56_06795 IPR020797 Cytidine deaminase, bacteria XM56_06800 IPR007300 CidB/LrgB family XM56_06800 IPR005261 Conserved hypothetical protein CHP00659 XM56_06805 IPR005538 LrgA/CidA family XM56_06805 IPR022957 Uncharacterised protein family UPF0299 XM56_06810 IPR036259 MFS transporter superfamily XM56_06810 IPR020846 Major facilitator superfamily domain XM56_06810 IPR011701 Major facilitator superfamily XM56_06830 IPR029038 Methionyl-tRNA synthetase, Zn-domain XM56_06830 IPR033911 Methioninyl-tRNA synthetase core domain XM56_06830 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site XM56_06830 IPR014758 Methionyl-tRNA synthetase XM56_06830 IPR023458 Methionine-tRNA ligase, type 1 XM56_06830 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal XM56_06830 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain XM56_06830 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XM56_06830 IPR002547 tRNA-binding domain XM56_06830 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding XM56_06830 IPR015413 Methionyl/Leucyl tRNA synthetase XM56_06830 IPR012340 Nucleic acid-binding, OB-fold XM56_06835 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 XM56_06835 IPR034904 Fe-S cluster assembly domain superfamily XM56_06835 IPR019591 Mrp/NBP35 ATP-binding protein XM56_06835 IPR000808 Mrp, conserved site XM56_06835 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_06840 IPR000764 Uridine kinase-like XM56_06840 IPR026008 Uridine kinase XM56_06840 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_06840 IPR006083 Phosphoribulokinase/uridine kinase XM56_06845 IPR036157 dUTPase-like superfamily XM56_06845 IPR011962 dCTP deaminase XM56_06845 IPR029054 dUTPase-like XM56_06845 IPR033704 dUTPase, trimeric XM56_06850 IPR007844 AsmA XM56_06855 IPR004669 C4-dicarboxylate anaerobic carrier XM56_06855 IPR018385 C4-dicarboxylate anaerobic carrier-like XM56_06860 IPR016169 FAD-binding, type PCMH, subdomain 2 XM56_06860 IPR005170 Transporter-associated domain XM56_06860 IPR036318 FAD-binding, type PCMH-like superfamily XM56_06860 IPR000644 CBS domain XM56_06860 IPR005496 Integral membrane protein TerC XM56_06865 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal XM56_06865 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase XM56_06865 IPR029044 Nucleotide-diphospho-sugar transferases XM56_06865 IPR014710 RmlC-like jelly roll fold XM56_06865 IPR011051 RmlC-like cupin domain superfamily XM56_06865 IPR005835 Nucleotidyl transferase domain XM56_06870 IPR016066 Alpha-D-phosphohexomutase, conserved site XM56_06870 IPR005841 Alpha-D-phosphohexomutase superfamily XM56_06870 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III XM56_06870 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II XM56_06870 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III XM56_06870 IPR005843 Alpha-D-phosphohexomutase, C-terminal XM56_06870 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily XM56_06870 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I XM56_06875 IPR005835 Nucleotidyl transferase domain XM56_06875 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type XM56_06875 IPR029044 Nucleotide-diphospho-sugar transferases XM56_06880 IPR029044 Nucleotide-diphospho-sugar transferases XM56_06880 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type XM56_06880 IPR005835 Nucleotidyl transferase domain XM56_06885 IPR016040 NAD(P)-binding domain XM56_06885 IPR006368 GDP-mannose 4,6-dehydratase XM56_06885 IPR036291 NAD(P)-binding domain superfamily XM56_06890 IPR015421 Pyridoxal phosphate-dependent transferase, major domain XM56_06890 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 XM56_06890 IPR015424 Pyridoxal phosphate-dependent transferase XM56_06890 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase XM56_06900 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_06900 IPR003439 ABC transporter-like XM56_06900 IPR003593 AAA+ ATPase domain XM56_06915 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain XM56_06915 IPR011034 Formyl transferase-like, C-terminal domain superfamily XM56_06915 IPR036477 Formyl transferase, N-terminal domain superfamily XM56_06915 IPR002376 Formyl transferase, N-terminal XM56_06915 IPR005793 Formyl transferase, C-terminal XM56_06915 IPR005794 Methionyl-tRNA formyltransferase XM56_06915 IPR001555 Phosphoribosylglycinamide formyltransferase, active site XM56_06920 IPR001296 Glycosyl transferase, family 1 XM56_06920 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain XM56_06925 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating XM56_06925 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding XM56_06925 IPR006114 6-phosphogluconate dehydrogenase, C-terminal XM56_06925 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily XM56_06925 IPR013328 6-phosphogluconate dehydrogenase, domain 2 XM56_06925 IPR036291 NAD(P)-binding domain superfamily XM56_06925 IPR006183 6-phosphogluconate dehydrogenase XM56_06925 IPR006184 6-phosphogluconate-binding site XM56_06930 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase XM56_06930 IPR023019 Histidine biosynthesis bifunctional protein HisIE XM56_06930 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily XM56_06930 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain XM56_06930 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like XM56_06935 IPR011060 Ribulose-phosphate binding barrel XM56_06935 IPR004651 Histidine biosynthesis, HisF XM56_06935 IPR006062 Histidine biosynthesis XM56_06935 IPR013785 Aldolase-type TIM barrel XM56_06940 IPR011060 Ribulose-phosphate binding barrel XM56_06940 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase XM56_06940 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA XM56_06940 IPR013785 Aldolase-type TIM barrel XM56_06940 IPR006062 Histidine biosynthesis XM56_06945 IPR017926 Glutamine amidotransferase XM56_06945 IPR010139 Imidazole glycerol phosphate synthase, subunit H XM56_06945 IPR029062 Class I glutamine amidotransferase-like XM56_06950 IPR005954 Histidinol-phosphatase XM56_06950 IPR036412 HAD-like superfamily XM56_06950 IPR006549 HAD-superfamily hydrolase,subfamily IIIA XM56_06950 IPR023214 HAD superfamily XM56_06950 IPR020568 Ribosomal protein S5 domain 2-type fold XM56_06950 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site XM56_06950 IPR000807 Imidazoleglycerol-phosphate dehydratase XM56_06950 IPR020566 Histidine biosynthesis bifunctional protein HisB XM56_06950 IPR006543 Histidinol-phosphate phosphatase XM56_06950 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily XM56_06955 IPR004839 Aminotransferase, class I/classII XM56_06955 IPR015421 Pyridoxal phosphate-dependent transferase, major domain XM56_06955 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site XM56_06955 IPR005861 Histidinol-phosphate aminotransferase family XM56_06955 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 XM56_06955 IPR015424 Pyridoxal phosphate-dependent transferase XM56_06960 IPR016161 Aldehyde/histidinol dehydrogenase XM56_06960 IPR001692 Histidinol dehydrogenase, conserved site XM56_06960 IPR022695 Histidinol dehydrogenase, monofunctional XM56_06960 IPR012131 Histidinol dehydrogenase XM56_06965 IPR013115 Histidine biosynthesis HisG, C-terminal XM56_06965 IPR011322 Nitrogen regulatory PII-like, alpha/beta XM56_06965 IPR013820 ATP phosphoribosyltransferase, catalytic domain XM56_06965 IPR001348 ATP phosphoribosyltransferase HisG XM56_06965 IPR020621 ATP phosphoribosyltransferase HisG, long form XM56_06965 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal XM56_06965 IPR018198 ATP phosphoribosyltransferase, conserved site XM56_06970 IPR001509 NAD-dependent epimerase/dehydratase XM56_06970 IPR036291 NAD(P)-binding domain superfamily XM56_06980 IPR001851 ABC transporter, permease XM56_06985 IPR015861 ABC transporter, ribose import, RbsA XM56_06985 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_06985 IPR003439 ABC transporter-like XM56_06985 IPR017871 ABC transporter, conserved site XM56_06985 IPR003593 AAA+ ATPase domain XM56_07000 IPR002293 Amino acid/polyamine transporter I XM56_07005 IPR023607 Exodeoxyribonuclease I XM56_07005 IPR038649 Exonuclease I, SH3-like domain superfamily XM56_07005 IPR034747 Exonuclease I, SH3-like domain XM56_07005 IPR013620 Exodeoxyribonuclease I, C-terminal XM56_07005 IPR013520 Exonuclease, RNase T/DNA polymerase III XM56_07005 IPR012337 Ribonuclease H-like superfamily XM56_07005 IPR036397 Ribonuclease H superfamily XM56_07005 IPR034748 Exonuclease I, C-terminal alpha-helical domain XM56_07010 IPR020806 Polyketide synthase, phosphopantetheine-binding domain XM56_07010 IPR036736 ACP-like superfamily XM56_07010 IPR020845 AMP-binding, conserved site XM56_07010 IPR000873 AMP-dependent synthetase/ligase XM56_07010 IPR042099 AMP-dependent synthetase-like superfamily XM56_07010 IPR013120 Male sterility, NAD-binding XM56_07010 IPR009081 Phosphopantetheine binding ACP domain XM56_07010 IPR010080 Thioester reductase-like domain XM56_07010 IPR036291 NAD(P)-binding domain superfamily XM56_07015 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein XM56_07020 IPR007458 Protein of unknown function DUF496 XM56_07025 IPR001851 ABC transporter, permease XM56_07030 IPR001851 ABC transporter, permease XM56_07040 IPR025997 Periplasmic binding protein XM56_07040 IPR028082 Periplasmic binding protein-like I XM56_07045 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup XM56_07045 IPR020568 Ribosomal protein S5 domain 2-type fold XM56_07045 IPR012363 Propanediol utilisation/coumermycin biosynthesis, PduX-related XM56_07045 IPR006204 GHMP kinase N-terminal domain XM56_07050 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 XM56_07050 IPR005860 L-threonine-O-3-phosphate decarboxylase XM56_07050 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site XM56_07050 IPR015421 Pyridoxal phosphate-dependent transferase, major domain XM56_07050 IPR004839 Aminotransferase, class I/classII XM56_07050 IPR015424 Pyridoxal phosphate-dependent transferase XM56_07055 IPR019478 Sirohaem synthase, dimerisation domain XM56_07055 IPR000878 Tetrapyrrole methylase XM56_07055 IPR035996 Tetrapyrrole methylase superfamily XM56_07055 IPR014777 Tetrapyrrole methylase, subdomain 1 XM56_07055 IPR014776 Tetrapyrrole methylase, subdomain 2 XM56_07055 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site XM56_07055 IPR028281 Siroheme synthase, central domain XM56_07055 IPR006366 Uroporphyrin-III C-methyltransferase XM56_07055 IPR036291 NAD(P)-binding domain superfamily XM56_07055 IPR037115 Sirohaem synthase, dimerisation domain superfamily XM56_07055 IPR012409 Sirohaem synthase XM56_07055 IPR006367 Sirohaem synthase, N-terminal XM56_07060 IPR004372 Acetate/propionate kinase XM56_07060 IPR000890 Aliphatic acid kinase, short-chain XM56_07060 IPR023865 Aliphatic acid kinase, short-chain, conserved site XM56_07060 IPR024896 Propionate kinase PduW XM56_07065 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_07065 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV XM56_07070 IPR000249 Microcompartment protein, bacteria XM56_07070 IPR009307 Ethanolamine utilisation EutS XM56_07070 IPR037233 CcmK-like superfamily XM56_07080 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily XM56_07080 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain XM56_07080 IPR009051 Alpha-helical ferredoxin XM56_07080 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site XM56_07080 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain XM56_07080 IPR026902 RnfC Barrel sandwich hybrid domain XM56_07080 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC XM56_07080 IPR019554 Soluble ligand binding domain XM56_07085 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA XM56_07085 IPR018211 Alcohol dehydrogenase, iron-type, conserved site XM56_07085 IPR039697 Iron-type alcohol dehydrogenase-like XM56_07090 IPR015590 Aldehyde dehydrogenase domain XM56_07090 IPR016162 Aldehyde dehydrogenase, N-terminal XM56_07090 IPR012408 Acetaldehyde/propionaldehyde dehydrogenase, EutE/PduP-related XM56_07090 IPR016161 Aldehyde/histidinol dehydrogenase XM56_07090 IPR016163 Aldehyde dehydrogenase, C-terminal XM56_07095 IPR036451 Cobalamin adenosyltransferase-like superfamily XM56_07095 IPR016030 Cobalamin adenosyltransferase-like XM56_07095 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type XM56_07100 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml XM56_07100 IPR036677 EutN/Ccml superfamily XM56_07110 IPR008300 Phosphate propanoyltransferase XM56_07120 IPR020808 Bacterial microcompartments protein, conserved site XM56_07120 IPR037233 CcmK-like superfamily XM56_07120 IPR000249 Microcompartment protein, bacteria XM56_07130 IPR040916 DD-reactivating factor swiveling domain XM56_07130 IPR009191 Diol dehydratase-reactivating factor alpha subunit XM56_07130 IPR028975 Diol dehydratase-reactivating factor, alpha subunit, swiveling domain superfamily XM56_07130 IPR030994 Diol dehydratase reactivase ATPase-like domain XM56_07135 IPR036091 Propanediol/glycerol dehydratase, small subunit superfamily XM56_07135 IPR003207 Propanediol/glycerol dehydratase, small subunit XM56_07140 IPR025541 Propanediol/glycerol dehydratase, medium subunit XM56_07140 IPR003208 Diol/glycerol dehydratase/dehydratase reactivating factor XM56_07140 IPR010254 B12-dependent dehydratases, beta subunit XM56_07145 IPR036999 Diol/glycerol dehydratase, large subunit superfamily XM56_07145 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic XM56_07145 IPR003206 Diol/glycerol dehydratase, large subunit XM56_07150 IPR000249 Microcompartment protein, bacteria XM56_07150 IPR009193 Polyhedral organelle shell protein, EutL/PduB type XM56_07150 IPR037233 CcmK-like superfamily XM56_07150 IPR030984 Microcompartment protein PduB XM56_07155 IPR000249 Microcompartment protein, bacteria XM56_07155 IPR037233 CcmK-like superfamily XM56_07155 IPR020808 Bacterial microcompartments protein, conserved site XM56_07160 IPR022357 Major intrinsic protein, conserved site XM56_07160 IPR000425 Major intrinsic protein XM56_07160 IPR023271 Aquaporin-like XM56_07165 IPR018771 PocR domain XM56_07165 IPR018060 DNA binding HTH domain, AraC-type XM56_07165 IPR009057 Homeobox-like domain superfamily XM56_07165 IPR020449 Transcription regulator HTH, AraC- type XM56_07165 IPR018062 HTH domain AraC-type, conserved site XM56_07170 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain XM56_07170 IPR011698 CobB/CobQ-like glutamine amidotransferase XM56_07170 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA XM56_07170 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_07170 IPR017929 CobB/CobQ glutamine amidotransferase XM56_07170 IPR029062 Class I glutamine amidotransferase-like XM56_07175 IPR004485 Cobalamin biosynthesis CobD/CbiB XM56_07180 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily XM56_07180 IPR003722 Cobalamin biosynthesis precorrin-8X methylmutase CobH/CbiC XM56_07185 IPR036074 CbiD superfamily XM56_07185 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD XM56_07190 IPR000878 Tetrapyrrole methylase XM56_07190 IPR035996 Tetrapyrrole methylase superfamily XM56_07190 IPR014777 Tetrapyrrole methylase, subdomain 1 XM56_07190 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase XM56_07195 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit XM56_07195 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XM56_07195 IPR007848 Methyltransferase small domain XM56_07200 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site XM56_07200 IPR014777 Tetrapyrrole methylase, subdomain 1 XM56_07200 IPR014776 Tetrapyrrole methylase, subdomain 2 XM56_07200 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase XM56_07200 IPR035996 Tetrapyrrole methylase superfamily XM56_07200 IPR000878 Tetrapyrrole methylase XM56_07205 IPR038029 GbiG N-terminal domain superfamily XM56_07205 IPR036518 CobE/GbiG C-terminal domain superfamily XM56_07205 IPR002750 CobE/GbiG C-terminal domain XM56_07205 IPR021745 Cobalamin biosynthesis central region XM56_07205 IPR021744 Cobalamin synthesis G, N-terminal XM56_07210 IPR006363 Precorrin-3B C17-methyltransferase domain XM56_07210 IPR014776 Tetrapyrrole methylase, subdomain 2 XM56_07210 IPR014777 Tetrapyrrole methylase, subdomain 1 XM56_07210 IPR035996 Tetrapyrrole methylase superfamily XM56_07210 IPR000878 Tetrapyrrole methylase XM56_07215 IPR003723 Precorrin-6x reductase XM56_07220 IPR010388 Anaerobic cobalt chelatase XM56_07225 IPR006364 Precorrin-2 C(20)-methyltransferase domain XM56_07225 IPR035996 Tetrapyrrole methylase superfamily XM56_07225 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site XM56_07225 IPR000878 Tetrapyrrole methylase XM56_07225 IPR014776 Tetrapyrrole methylase, subdomain 2 XM56_07225 IPR012382 Precorrin-2 C(20)-methyltransferase XM56_07225 IPR014777 Tetrapyrrole methylase, subdomain 1 XM56_07230 IPR002751 Metal transport protein CbiM/NikMN XM56_07230 IPR018024 Cobalamin (vitamin B12) transport protein CbiM XM56_07235 IPR003705 Cobalt transport protein CbiN XM56_07240 IPR012809 Cobalt ECF transporter T component CbiQ XM56_07240 IPR003339 ABC/ECF transporter, transmembrane component XM56_07245 IPR015856 ABC transporter, CbiO/EcfA subunit XM56_07245 IPR005876 Cobalt transport protein ATP-binding subunit XM56_07245 IPR003439 ABC transporter-like XM56_07245 IPR003593 AAA+ ATPase domain XM56_07245 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_07245 IPR017871 ABC transporter, conserved site XM56_07250 IPR011698 CobB/CobQ-like glutamine amidotransferase XM56_07250 IPR004459 Cobyric acid synthase CobQ XM56_07250 IPR033949 Cobyric acid synthase, glutamine amidotransferase type 1 XM56_07250 IPR017929 CobB/CobQ glutamine amidotransferase XM56_07250 IPR029062 Class I glutamine amidotransferase-like XM56_07250 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_07255 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase XM56_07255 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_07260 IPR003805 Adenosylcobinamide-GDP ribazoletransferase XM56_07265 IPR013078 Histidine phosphatase superfamily, clade-1 XM56_07265 IPR017578 Alpha-ribazole phosphatase, CobC XM56_07265 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site XM56_07265 IPR029033 Histidine phosphatase superfamily XM56_07270 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal XM56_07270 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like XM56_07270 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic XM56_07270 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily XM56_07330 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_07330 IPR041546 ClpA/ClpB, AAA lid domain XM56_07330 IPR028299 ClpA/B, conserved site 2 XM56_07330 IPR019489 Clp ATPase, C-terminal XM56_07330 IPR017729 Type VI secretion system, ATPase ClpV1 XM56_07330 IPR004176 Clp, N-terminal XM56_07330 IPR036628 Clp, N-terminal domain superfamily XM56_07330 IPR003593 AAA+ ATPase domain XM56_07330 IPR003959 ATPase, AAA-type, core XM56_07330 IPR001270 ClpA/B family XM56_07330 IPR018368 ClpA/B, conserved site 1 XM56_07335 IPR000259 Fimbrial-type adhesion domain XM56_07335 IPR036937 Fimbrial-type adhesion domain superfamily XM56_07335 IPR008966 Adhesion domain superfamily XM56_07340 IPR013783 Immunoglobulin-like fold XM56_07340 IPR008962 PapD-like superfamily XM56_07340 IPR036316 Pili assembly chaperone, C-terminal domain superfamily XM56_07340 IPR001829 Pili assembly chaperone, bacterial XM56_07340 IPR016148 Pili assembly chaperone, C-terminal XM56_07340 IPR018046 Pili assembly chaperone, conserved site XM56_07340 IPR016147 Pili assembly chaperone, N-terminal XM56_07390 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset XM56_07390 IPR006531 Gp5 N-terminal XM56_07390 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein XM56_07390 IPR037026 Vgr protein, OB-fold domain superfamily XM56_07415 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail XM56_07415 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body XM56_07415 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XM56_07415 IPR001518 Argininosuccinate synthase XM56_07415 IPR023437 Argininosuccinate synthase, type 2 subfamily XM56_07415 IPR018223 Argininosuccinate synthase, conserved site XM56_07420 IPR002528 Multi antimicrobial extrusion protein XM56_07430 IPR034291 Thiamine phosphate synthase XM56_07430 IPR013785 Aldolase-type TIM barrel XM56_07430 IPR036206 Thiamin phosphate synthase superfamily XM56_07430 IPR022998 Thiamine phosphate synthase/TenI XM56_07435 IPR000150 Cof family XM56_07435 IPR023214 HAD superfamily XM56_07435 IPR006379 HAD-superfamily hydrolase, subfamily IIB XM56_07435 IPR036412 HAD-like superfamily XM56_07440 IPR014036 DeoR C-terminal sensor domain XM56_07440 IPR037171 NagB/RpiA transferase-like XM56_07440 IPR018356 Transcription regulator, HTH DeoR-type, conserved site XM56_07440 IPR001034 DeoR-type HTH domain XM56_07440 IPR036390 Winged helix DNA-binding domain superfamily XM56_07440 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_07445 IPR023650 Beta-lactamase, class-A active site XM56_07445 IPR012338 Beta-lactamase/transpeptidase-like XM56_07445 IPR001466 Beta-lactamase-related XM56_07450 IPR002545 CheW-like domain XM56_07450 IPR036061 CheW-like domain superfamily XM56_07450 IPR024181 Chemotaxis response regulator CheV XM56_07450 IPR011006 CheY-like superfamily XM56_07450 IPR001789 Signal transduction response regulator, receiver domain XM56_07460 IPR000524 Transcription regulator HTH, GntR XM56_07460 IPR015421 Pyridoxal phosphate-dependent transferase, major domain XM56_07460 IPR015424 Pyridoxal phosphate-dependent transferase XM56_07460 IPR004839 Aminotransferase, class I/classII XM56_07460 IPR036390 Winged helix DNA-binding domain superfamily XM56_07460 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_07470 IPR003710 Ketopantoate reductase ApbA/PanE XM56_07470 IPR013328 6-phosphogluconate dehydrogenase, domain 2 XM56_07470 IPR013752 Ketopantoate reductase, C-terminal domain XM56_07470 IPR013332 Ketopantoate reductase, N-terminal domain XM56_07470 IPR036291 NAD(P)-binding domain superfamily XM56_07470 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily XM56_07480 IPR003593 AAA+ ATPase domain XM56_07480 IPR003439 ABC transporter-like XM56_07480 IPR017871 ABC transporter, conserved site XM56_07480 IPR015853 ABC transporter, ferric cation import, FbpC XM56_07480 IPR008995 Molybdate/tungstate binding, C-terminal XM56_07480 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_07480 IPR013611 Transport-associated OB, type 2 XM56_07485 IPR000515 ABC transporter type 1, transmembrane domain MetI-like XM56_07485 IPR035906 MetI-like superfamily XM56_07490 IPR026045 Ferric binding protein XM56_07495 IPR021159 Glycerate/sugar phosphate transporter, conserved site XM56_07495 IPR000849 Sugar phosphate transporter XM56_07495 IPR020846 Major facilitator superfamily domain XM56_07495 IPR036259 MFS transporter superfamily XM56_07495 IPR011701 Major facilitator superfamily XM56_07500 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain XM56_07500 IPR003594 Histidine kinase/HSP90-like ATPase XM56_07500 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XM56_07500 IPR005467 Histidine kinase domain XM56_07500 IPR007895 MASE1 XM56_07505 IPR000792 Transcription regulator LuxR, C-terminal XM56_07505 IPR001789 Signal transduction response regulator, receiver domain XM56_07505 IPR016032 Signal transduction response regulator, C-terminal effector XM56_07505 IPR011006 CheY-like superfamily XM56_07510 IPR001789 Signal transduction response regulator, receiver domain XM56_07510 IPR011006 CheY-like superfamily XM56_07510 IPR024187 Signal transduction response regulator, citrate/malate metabolism XM56_07510 IPR028141 Transcriptional regulator XM56_07515 IPR013767 PAS fold XM56_07515 IPR033463 Single cache domain 3 XM56_07515 IPR029151 Periplasmic sensor-like domain superfamily XM56_07515 IPR004358 Signal transduction histidine kinase-related protein, C-terminal XM56_07515 IPR035965 PAS domain superfamily XM56_07515 IPR039506 SpoOB, alpha-helical domain XM56_07515 IPR005467 Histidine kinase domain XM56_07515 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XM56_07515 IPR003594 Histidine kinase/HSP90-like ATPase XM56_07515 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB XM56_07515 IPR000014 PAS domain XM56_07525 IPR006495 Citrate lyase acyl carrier protein CitD XM56_07525 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein XM56_07530 IPR005000 HpcH/HpaI aldolase/citrate lyase domain XM56_07530 IPR011206 Citrate lyase beta subunit-like XM56_07530 IPR006475 Citrate lyase, beta subunit, bacteria XM56_07530 IPR040442 Pyruvate kinase-like domain superfamily XM56_07530 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily XM56_07535 IPR037171 NagB/RpiA transferase-like XM56_07535 IPR006472 Citrate lyase, alpha subunit XM56_07540 IPR002736 Triphosphoribosyl-dephospho-CoA protein XM56_07540 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase XM56_07540 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG XM56_07545 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG XM56_07545 IPR002736 Triphosphoribosyl-dephospho-CoA protein XM56_07550 IPR030676 Citrate carrier CitT-related XM56_07550 IPR001898 Solute carrier family 13 XM56_07555 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit XM56_07555 IPR004681 TRAP transporter large membrane protein DctM XM56_07565 IPR018389 TRAP transporter solute receptor DctP/TeaA XM56_07565 IPR004682 TRAP transporter solute receptor, DctP family XM56_07565 IPR038404 TRAP transporter solute receptor DctP superfamily XM56_07575 IPR037143 4'-phosphopantetheinyl transferase domain superfamily XM56_07575 IPR008278 4'-phosphopantetheinyl transferase domain XM56_07575 IPR003542 Enterobactin synthetase-like, component D XM56_07575 IPR041354 4'-phosphopantetheinyl transferase, N-terminal domain XM56_07585 IPR005829 Sugar transporter, conserved site XM56_07585 IPR020846 Major facilitator superfamily domain XM56_07585 IPR005828 Major facilitator, sugar transporter-like XM56_07585 IPR036259 MFS transporter superfamily XM56_07585 IPR003663 Sugar/inositol transporter XM56_07590 IPR002114 Phosphotransferase system, HPr serine phosphorylation site XM56_07590 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site XM56_07590 IPR002178 PTS EIIA type-2 domain XM56_07590 IPR016152 Phosphotransferase/anion transporter XM56_07590 IPR035895 HPr-like superfamily XM56_07590 IPR000032 Phosphocarrier protein HPr-like XM56_07590 IPR016258 Multiphosphoryl transfer protein FruB XM56_07595 IPR018636 Protein of unknown function DUF2058 XM56_07600 IPR020103 Pseudouridine synthase, catalytic domain superfamily XM56_07600 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site XM56_07600 IPR006145 Pseudouridine synthase, RsuA/RluA XM56_07615 IPR016148 Pili assembly chaperone, C-terminal XM56_07615 IPR036316 Pili assembly chaperone, C-terminal domain superfamily XM56_07615 IPR018046 Pili assembly chaperone, conserved site XM56_07615 IPR001829 Pili assembly chaperone, bacterial XM56_07615 IPR016147 Pili assembly chaperone, N-terminal XM56_07615 IPR008962 PapD-like superfamily XM56_07615 IPR013783 Immunoglobulin-like fold XM56_07625 IPR037224 PapC, N-terminal domain superfamily XM56_07625 IPR025885 PapC, N-terminal domain XM56_07625 IPR018030 Fimbrial membrane usher, conserved site XM56_07625 IPR000015 Outer membrane usher protein XM56_07625 IPR025949 PapC-like, C-terminal domain XM56_07625 IPR042186 Outer membrane usher protein FimD, plug domain XM56_07630 IPR001829 Pili assembly chaperone, bacterial XM56_07630 IPR016148 Pili assembly chaperone, C-terminal XM56_07630 IPR018046 Pili assembly chaperone, conserved site XM56_07630 IPR016147 Pili assembly chaperone, N-terminal XM56_07630 IPR013783 Immunoglobulin-like fold XM56_07630 IPR036316 Pili assembly chaperone, C-terminal domain superfamily XM56_07630 IPR008962 PapD-like superfamily XM56_07640 IPR011006 CheY-like superfamily XM56_07640 IPR003594 Histidine kinase/HSP90-like ATPase XM56_07640 IPR004358 Signal transduction histidine kinase-related protein, C-terminal XM56_07640 IPR005467 Histidine kinase domain XM56_07640 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain XM56_07640 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily XM56_07640 IPR036641 HPT domain superfamily XM56_07640 IPR000014 PAS domain XM56_07640 IPR000700 PAS-associated, C-terminal XM56_07640 IPR035965 PAS domain superfamily XM56_07640 IPR013767 PAS fold XM56_07640 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain XM56_07640 IPR001789 Signal transduction response regulator, receiver domain XM56_07640 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XM56_07640 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF XM56_07645 IPR016032 Signal transduction response regulator, C-terminal effector XM56_07645 IPR001789 Signal transduction response regulator, receiver domain XM56_07645 IPR000792 Transcription regulator LuxR, C-terminal XM56_07645 IPR011006 CheY-like superfamily XM56_07655 IPR010384 MtfA family XM56_07655 IPR024079 Metallopeptidase, catalytic domain superfamily XM56_07655 IPR042252 MtfA, N-terminal XM56_07665 IPR000577 Carbohydrate kinase, FGGY XM56_07665 IPR018485 Carbohydrate kinase, FGGY, C-terminal XM56_07665 IPR018484 Carbohydrate kinase, FGGY, N-terminal XM56_07665 IPR018483 Carbohydrate kinase, FGGY, conserved site XM56_07685 IPR018030 Fimbrial membrane usher, conserved site XM56_07685 IPR042186 Outer membrane usher protein FimD, plug domain XM56_07685 IPR025949 PapC-like, C-terminal domain XM56_07685 IPR000015 Outer membrane usher protein XM56_07685 IPR025885 PapC, N-terminal domain XM56_07685 IPR037224 PapC, N-terminal domain superfamily XM56_07690 IPR036316 Pili assembly chaperone, C-terminal domain superfamily XM56_07690 IPR008962 PapD-like superfamily XM56_07690 IPR016147 Pili assembly chaperone, N-terminal XM56_07690 IPR013783 Immunoglobulin-like fold XM56_07705 IPR033379 Histidine acid phosphatase active site XM56_07705 IPR000560 Histidine phosphatase superfamily, clade-2 XM56_07705 IPR029033 Histidine phosphatase superfamily XM56_07710 IPR017704 Putative selenium-binding protein YdfZ XM56_07725 IPR019713 Inner membrane protein YlaC XM56_07730 IPR018201 Beta-ketoacyl synthase, active site XM56_07730 IPR013154 Alcohol dehydrogenase, N-terminal XM56_07730 IPR014031 Beta-ketoacyl synthase, C-terminal XM56_07730 IPR014030 Beta-ketoacyl synthase, N-terminal XM56_07730 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding XM56_07730 IPR013149 Alcohol dehydrogenase, C-terminal XM56_07730 IPR036291 NAD(P)-binding domain superfamily XM56_07730 IPR032821 Ketoacyl-synthetase, C-terminal extension XM56_07730 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase XM56_07730 IPR014043 Acyl transferase XM56_07730 IPR036736 ACP-like superfamily XM56_07730 IPR001227 Acyl transferase domain superfamily XM56_07730 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain XM56_07730 IPR011032 GroES-like superfamily XM56_07730 IPR013968 Polyketide synthase, ketoreductase domain XM56_07730 IPR016039 Thiolase-like XM56_07730 IPR009081 Phosphopantetheine binding ACP domain XM56_07730 IPR020806 Polyketide synthase, phosphopantetheine-binding domain XM56_07730 IPR020807 Polyketide synthase, dehydratase domain XM56_07730 IPR042104 Polyketide synthase, dehydratase domain superfamily XM56_07730 IPR020843 Polyketide synthase, enoylreductase domain XM56_07735 IPR001207 Transposase, mutator type XM56_07740 IPR004199 Beta galactosidase small chain/ domain 5 XM56_07740 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily XM56_07740 IPR011013 Galactose mutarotase-like domain superfamily XM56_07740 IPR014718 Glycoside hydrolase-type carbohydrate-binding XM56_07740 IPR006101 Glycoside hydrolase, family 2 XM56_07740 IPR023232 Glycoside hydrolase, family 2, active site XM56_07740 IPR008979 Galactose-binding-like domain superfamily XM56_07740 IPR006103 Glycoside hydrolase family 2, catalytic domain XM56_07740 IPR017853 Glycoside hydrolase superfamily XM56_07740 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase XM56_07740 IPR032312 Beta-galactosidase, domain 4 XM56_07740 IPR006104 Glycosyl hydrolases family 2, sugar binding domain XM56_07740 IPR013783 Immunoglobulin-like fold XM56_07740 IPR023230 Glycoside hydrolase, family 2, conserved site XM56_07740 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich XM56_07745 IPR010982 Lambda repressor-like, DNA-binding domain superfamily XM56_07745 IPR028082 Periplasmic binding protein-like I XM56_07745 IPR000843 LacI-type HTH domain XM56_07750 IPR002059 Cold-shock protein, DNA-binding XM56_07750 IPR019844 Cold-shock (CSD) domain XM56_07750 IPR012340 Nucleic acid-binding, OB-fold XM56_07750 IPR012156 Cold shock, CspA XM56_07750 IPR011129 Cold shock domain XM56_07755 IPR019717 Dextransucrase DSRB XM56_07760 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding XM56_07760 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily XM56_07760 IPR004090 Chemotaxis methyl-accepting receptor XM56_07760 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site XM56_07760 IPR003660 HAMP domain XM56_07760 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain XM56_07775 IPR003416 MgtC/SapB/SrpB/YhiD family XM56_07780 IPR008250 P-type ATPase, A domain superfamily XM56_07780 IPR004014 Cation-transporting P-type ATPase, N-terminal XM56_07780 IPR023299 P-type ATPase, cytoplasmic domain N XM56_07780 IPR018303 P-type ATPase, phosphorylation site XM56_07780 IPR023298 P-type ATPase, transmembrane domain superfamily XM56_07780 IPR036412 HAD-like superfamily XM56_07780 IPR001757 P-type ATPase XM56_07780 IPR006415 P-type ATPase, subfamily IIIB XM56_07780 IPR023214 HAD superfamily XM56_07780 IPR006068 Cation-transporting P-type ATPase, C-terminal XM56_07785 IPR036291 NAD(P)-binding domain superfamily XM56_07785 IPR020843 Polyketide synthase, enoylreductase domain XM56_07785 IPR041694 Oxidoreductase, N-terminal domain XM56_07785 IPR013149 Alcohol dehydrogenase, C-terminal XM56_07785 IPR011032 GroES-like superfamily XM56_07790 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XM56_07790 IPR006015 Universal stress protein A family XM56_07790 IPR006016 UspA XM56_07795 IPR023559 Flagellar transcriptional activator FlhD XM56_07795 IPR036194 Flagellar transcriptional activator FlhD superfamily XM56_07800 IPR007944 Flagellar transcriptional activator FlhC XM56_07805 IPR002898 MotA/TolQ/ExbB proton channel XM56_07805 IPR022522 Flagellar motor stator, MotA XM56_07805 IPR000540 Flagellar motor protein MotA, conserved site XM56_07810 IPR036737 OmpA-like domain superfamily XM56_07810 IPR025713 Motility protein B, N-terminal domain XM56_07810 IPR006665 OmpA-like domain XM56_07815 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain XM56_07815 IPR004358 Signal transduction histidine kinase-related protein, C-terminal XM56_07815 IPR036061 CheW-like domain superfamily XM56_07815 IPR004105 Histidine kinase CheA-like, homodimeric domain XM56_07815 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily XM56_07815 IPR002545 CheW-like domain XM56_07815 IPR015162 CheY binding XM56_07815 IPR035891 CheY-binding domain of CheA XM56_07815 IPR003594 Histidine kinase/HSP90-like ATPase XM56_07815 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XM56_07815 IPR005467 Histidine kinase domain XM56_07815 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily XM56_07815 IPR036641 HPT domain superfamily XM56_07820 IPR002545 CheW-like domain XM56_07820 IPR039315 Chemotaxis protein CheW XM56_07820 IPR036061 CheW-like domain superfamily XM56_07825 IPR003660 HAMP domain XM56_07825 IPR004090 Chemotaxis methyl-accepting receptor XM56_07825 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site XM56_07825 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain XM56_07825 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily XM56_07825 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding XM56_07830 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily XM56_07830 IPR003660 HAMP domain XM56_07830 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding XM56_07830 IPR004090 Chemotaxis methyl-accepting receptor XM56_07830 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site XM56_07830 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain XM56_07835 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XM56_07835 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily XM56_07835 IPR026024 Chemotaxis protein methyltransferase CheR XM56_07835 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal XM56_07835 IPR000780 MCP methyltransferase, CheR-type XM56_07835 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal XM56_07840 IPR035909 Methylesterase CheB, C-terminal XM56_07840 IPR011006 CheY-like superfamily XM56_07840 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase XM56_07840 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type XM56_07840 IPR001789 Signal transduction response regulator, receiver domain XM56_07845 IPR011006 CheY-like superfamily XM56_07845 IPR001789 Signal transduction response regulator, receiver domain XM56_07850 IPR007439 Chemotaxis phosphatase, CheZ XM56_07860 IPR006136 Flagellar biosynthetic protein FlhB XM56_07860 IPR006135 Type III secretion system substrate exporter XM56_07860 IPR029025 Type III secretion system substrate exporter, C-terminal XM56_07865 IPR042196 FHIPEP, domain 4 XM56_07865 IPR025505 FHIPEP conserved site XM56_07865 IPR006301 Flagellar biosynthesis protein FlhA XM56_07865 IPR001712 Type III secretion system FHIPEP XM56_07865 IPR042193 FHIPEP, domain 3 XM56_07865 IPR042194 FHIPEP, domain 1 XM56_07870 IPR009420 Flagellar protein FlhE XM56_07875 IPR003535 Intimin/invasin bacterial adhesion mediator protein XM56_07875 IPR038177 Inverse autotransporter, beta-domain superfamily XM56_07875 IPR024519 Inverse autotransporter, beta-domain XM56_07875 IPR016187 C-type lectin fold XM56_07875 IPR016186 C-type lectin-like/link domain superfamily XM56_07875 IPR013117 Intimin, C-terminal XM56_07875 IPR013783 Immunoglobulin-like fold XM56_07875 IPR015217 Invasin, domain 3 XM56_07875 IPR008964 Invasin/intimin cell-adhesion fragments XM56_07875 IPR003344 Big-1 (bacterial Ig-like domain 1) domain XM56_07880 IPR036679 FlgN-like superfamily XM56_07880 IPR007809 FlgN-like protein XM56_07885 IPR007412 Anti-sigma-28 factor, FlgM XM56_07885 IPR031316 Anti-sigma-28 factor FlgM, C-terminal XM56_07885 IPR035890 Anti-sigma-28 factor FlgM superfamily XM56_07890 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal XM56_07890 IPR013974 SAF domain XM56_07890 IPR041231 FlgA, N-terminal XM56_07890 IPR039246 Flagellar protein FlgA XM56_07895 IPR001444 Flagellar basal body rod protein, N-terminal XM56_07895 IPR019776 Flagellar basal body rod protein, conserved site XM56_07895 IPR006300 Flagellar basal-body rod protein FlgB XM56_07900 IPR019776 Flagellar basal body rod protein, conserved site XM56_07900 IPR001444 Flagellar basal body rod protein, N-terminal XM56_07900 IPR006299 Flagellar basal-body rod protein FlgC XM56_07900 IPR010930 Flagellar basal-body/hook protein, C-terminal domain XM56_07905 IPR005648 Flagellar hook capping protein XM56_07905 IPR025965 FlgD Ig-like domain XM56_07905 IPR025963 FlgD Tudor-like domain XM56_07910 IPR010930 Flagellar basal-body/hook protein, C-terminal domain XM56_07910 IPR020013 Flagellar hook-basal body protein, FlgE/F/G XM56_07910 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like XM56_07910 IPR019776 Flagellar basal body rod protein, conserved site XM56_07910 IPR001444 Flagellar basal body rod protein, N-terminal XM56_07910 IPR011491 Flagellar hook protein FlgE XM56_07910 IPR037058 Flagellar hook protein FlgE superfamily XM56_07915 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like XM56_07915 IPR020013 Flagellar hook-basal body protein, FlgE/F/G XM56_07915 IPR001444 Flagellar basal body rod protein, N-terminal XM56_07915 IPR010930 Flagellar basal-body/hook protein, C-terminal domain XM56_07915 IPR019776 Flagellar basal body rod protein, conserved site XM56_07920 IPR001444 Flagellar basal body rod protein, N-terminal XM56_07920 IPR020013 Flagellar hook-basal body protein, FlgE/F/G XM56_07920 IPR010930 Flagellar basal-body/hook protein, C-terminal domain XM56_07920 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like XM56_07920 IPR012834 Flagellar basal-body rod FlgG XM56_07920 IPR019776 Flagellar basal body rod protein, conserved site XM56_07925 IPR000527 Flagellar L-ring protein XM56_07930 IPR001782 Flagellar P-ring protein XM56_07935 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain XM56_07935 IPR013377 Peptidoglycan hydrolase FlgJ XM56_07935 IPR019301 Flagellar protein FlgJ, N-terminal XM56_07940 IPR002371 Flagellar hook-associated protein 1 XM56_07940 IPR010930 Flagellar basal-body/hook protein, C-terminal domain XM56_07940 IPR001444 Flagellar basal body rod protein, N-terminal XM56_07945 IPR001029 Flagellin, D0/D1 domain XM56_07945 IPR013384 Flagellar hook-associated protein 3 XM56_07950 IPR006303 Flagellar biosynthesis protein FliR XM56_07950 IPR002010 Type III secretion system inner membrane R protein XM56_07955 IPR002191 Bacterial export protein family 3 XM56_07955 IPR006305 Flagellar biosynthesis protein FliQ XM56_07960 IPR005837 Flagellar transport protein FliP XM56_07960 IPR005838 Type III secretion system inner membrane P protein XM56_07965 IPR022781 Flagellar biosynthesis protein, FliO XM56_07970 IPR031576 Flagellar motor switch protein FliN, N-terminal XM56_07970 IPR001543 Surface presentation of antigen (SpoA) XM56_07970 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb XM56_07970 IPR012826 Flagellar motor switch FliN XM56_07970 IPR036429 SpoA-like superfamily XM56_07975 IPR036429 SpoA-like superfamily XM56_07975 IPR001543 Surface presentation of antigen (SpoA) XM56_07975 IPR001689 Flagellar motor switch protein FliM XM56_07975 IPR028976 CheC-like superfamily XM56_07980 IPR005503 Flagellar basal body-associated protein FliL XM56_07985 IPR038610 FliK-like, C-terminal domain superfamily XM56_07985 IPR021136 Flagellar hook-length control protein-like, C-terminal XM56_07985 IPR001635 Flagellar hook-length control protein FliK XM56_07990 IPR018006 Flagellar FliJ, proteobacteria XM56_07990 IPR012823 Flagellar export FliJ XM56_07995 IPR005714 ATPase, type III secretion system, FliI/YscN XM56_07995 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_07995 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site XM56_07995 IPR032463 ATPase, type III secretion system, FliI XM56_07995 IPR020005 Flagellar export ATPase FliI, clade 1 XM56_07995 IPR003593 AAA+ ATPase domain XM56_07995 IPR040627 T3SS EscN ATPase, C-terminal XM56_07995 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain XM56_08000 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE XM56_08000 IPR000563 Flagellar assembly protein FliH XM56_08005 IPR028263 Flagellar motor switch protein FliG, N-terminal domain XM56_08005 IPR000090 Flagellar motor switch protein FliG XM56_08005 IPR023087 Flagellar motor switch protein FliG, C-terminal XM56_08005 IPR011002 Flagellar motor switch protein FliG, alpha-helical XM56_08005 IPR032779 Flagellar motor switch protein FliG, middle domain XM56_08010 IPR013556 Flagellar M-ring C-terminal XM56_08010 IPR006182 Secretory protein YscJ/FliF XM56_08010 IPR000067 Flagellar M-ring protein FliF XM56_08015 IPR001624 Flagellar hook-basal body complex protein FliE XM56_08040 IPR036687 DinI-like superfamily XM56_08040 IPR010391 DNA damage-inducible protein DinI-like XM56_08050 IPR011257 DNA glycosylase XM56_08050 IPR003265 HhH-GPD domain XM56_08055 IPR037522 HD-GYP domain XM56_08055 IPR006674 HD domain XM56_08055 IPR003607 HD/PDEase domain XM56_08055 IPR006675 HDIG domain XM56_08060 IPR018062 HTH domain AraC-type, conserved site XM56_08060 IPR018060 DNA binding HTH domain, AraC-type XM56_08060 IPR009057 Homeobox-like domain superfamily XM56_08060 IPR020449 Transcription regulator HTH, AraC- type XM56_08065 IPR008622 Flagellar protein FliT XM56_08070 IPR036584 Flagellar protein FliS superfamily XM56_08070 IPR003713 Flagellar protein FliS XM56_08075 IPR010810 Flagellin hook, IN motif XM56_08075 IPR010809 Flagellar hook-associated protein 2, C-terminal XM56_08075 IPR040026 Flagellar hook-associated protein 2 XM56_08075 IPR003481 Flagellar hook-associated protein 2, N-terminal XM56_08080 IPR001492 Flagellin XM56_08080 IPR001029 Flagellin, D0/D1 domain XM56_08080 IPR014981 Flagellin D3 XM56_08085 IPR014981 Flagellin D3 XM56_08085 IPR001029 Flagellin, D0/D1 domain XM56_08085 IPR001492 Flagellin XM56_08095 IPR007624 RNA polymerase sigma-70 region 3 XM56_08095 IPR007627 RNA polymerase sigma-70 region 2 XM56_08095 IPR028617 RNA polymerase sigma factor FliA XM56_08095 IPR007630 RNA polymerase sigma-70 region 4 XM56_08095 IPR012845 RNA polymerase sigma factor, FliA/WhiG XM56_08095 IPR000943 RNA polymerase sigma-70 XM56_08095 IPR014284 RNA polymerase sigma-70 like domain XM56_08095 IPR013325 RNA polymerase sigma factor, region 2 XM56_08095 IPR013324 RNA polymerase sigma factor, region 3/4-like XM56_08100 IPR004107 Integrase, SAM-like, N-terminal XM56_08100 IPR022523 Flagellar regulator, FliZ XM56_08105 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase XM56_08105 IPR023702 D-cysteine desulphhydrase, bacterial XM56_08105 IPR005966 D-cysteine desulfhydrase XM56_08105 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme XM56_08105 IPR001926 Pyridoxal-phosphate dependent enzyme XM56_08135 IPR013321 Arc-type ribbon-helix-helix XM56_08135 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 XM56_08135 IPR029510 Aldehyde dehydrogenase, glutamic acid active site XM56_08135 IPR016160 Aldehyde dehydrogenase, cysteine active site XM56_08135 IPR015590 Aldehyde dehydrogenase domain XM56_08135 IPR016162 Aldehyde dehydrogenase, N-terminal XM56_08135 IPR029041 FAD-linked oxidoreductase-like XM56_08135 IPR041349 Proline utilization A proline dehydrogenase N-terminal domain XM56_08135 IPR024090 Proline dehydrogenase PutA, domain I XM56_08135 IPR010985 Ribbon-helix-helix XM56_08135 IPR025703 Bifunctional protein PutA XM56_08135 IPR016163 Aldehyde dehydrogenase, C-terminal XM56_08135 IPR024089 Proline dehydrogenase PutA, domain I/II XM56_08135 IPR024082 Proline dehydrogenase PutA, domain II XM56_08135 IPR002872 Proline dehydrogenase domain XM56_08135 IPR016161 Aldehyde/histidinol dehydrogenase XM56_08140 IPR018212 Sodium/solute symporter, conserved site XM56_08140 IPR001734 Sodium/solute symporter XM56_08140 IPR011851 Sodium/proline symporter XM56_08140 IPR038377 Sodium/glucose symporter superfamily XM56_08150 IPR003615 HNH nuclease XM56_08150 IPR008514 Type VI secretion system effector, Hcp XM56_08150 IPR036624 Hcp1-like superfamily XM56_08160 IPR004923 Iron permease FTR1/Fip1/EfeU XM56_08165 IPR018976 Imelysin-like domain XM56_08165 IPR034981 EfeO/Algp7, imelysin-like domain XM56_08165 IPR038352 Imelysin-like domain superfamily XM56_08165 IPR008972 Cupredoxin XM56_08165 IPR028096 EfeO-type cupredoxin-like domain XM56_08170 IPR006311 Twin-arginine translocation pathway, signal sequence XM56_08170 IPR006313 Deferrochelatase/peroxidase EfeB XM56_08170 IPR006314 Dyp-type peroxidase XM56_08170 IPR011008 Dimeric alpha-beta barrel XM56_08175 IPR005025 NADPH-dependent FMN reductase-like XM56_08175 IPR029039 Flavoprotein-like superfamily XM56_08175 IPR037513 NAD(P)H dehydrogenase (quinone), prokaryotic XM56_08175 IPR008254 Flavodoxin/nitric oxide synthase XM56_08175 IPR010089 Flavoprotein WrbA-like XM56_08185 IPR019936 Mutatrotase, YjhT-like XM56_08185 IPR006652 Kelch repeat type 1 XM56_08185 IPR015915 Kelch-type beta propeller XM56_08200 IPR012349 FMN-binding split barrel XM56_08200 IPR019917 FMN reductase (NADH) RutF XM56_08200 IPR002563 Flavin reductase like domain XM56_08205 IPR000415 Nitroreductase-like XM56_08205 IPR029479 Nitroreductase XM56_08205 IPR023936 NADH dehydrogenase/NAD(P)H nitroreductase, putative, RutE XM56_08210 IPR029058 Alpha/Beta hydrolase fold XM56_08210 IPR019913 Pyrimidine utilisation protein RutD XM56_08210 IPR000073 Alpha/beta hydrolase fold-1 XM56_08215 IPR035959 RutC-like superfamily XM56_08215 IPR006175 YjgF/YER057c/UK114 family XM56_08215 IPR019897 RidA, conserved site XM56_08215 IPR019898 Putative aminoacrylate peracid reductase RutC XM56_08220 IPR000868 Isochorismatase-like XM56_08220 IPR036380 Isochorismatase-like superfamily XM56_08220 IPR019916 Isochorismatase, RutB XM56_08230 IPR009057 Homeobox-like domain superfamily XM56_08230 IPR001647 DNA-binding HTH domain, TetR-type XM56_08230 IPR013573 Transcription regulator YcdC, C-terminal XM56_08230 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily XM56_08230 IPR019915 Transcription regulator, pyrimidine utilisation, RutR XM56_08235 IPR004841 Amino acid permease/ SLC12A domain XM56_08235 IPR004840 Amino acid permease, conserved site XM56_08245 IPR011010 DNA breaking-rejoining enzyme, catalytic core XM56_08245 IPR013762 Integrase-like, catalytic domain superfamily XM56_08245 IPR002104 Integrase, catalytic domain XM56_08245 IPR010998 Integrase/recombinase, N-terminal XM56_08250 IPR009057 Homeobox-like domain superfamily XM56_08250 IPR002514 Transposase IS3/IS911family XM56_08260 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC XM56_08260 IPR013216 Methyltransferase type 11 XM56_08260 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XM56_08275 IPR006047 Glycosyl hydrolase, family 13, catalytic domain XM56_08275 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta XM56_08275 IPR017853 Glycoside hydrolase superfamily XM56_08275 IPR013780 Glycosyl hydrolase, all-beta XM56_08275 IPR013776 Alpha-amylase, thermostable XM56_08285 IPR009707 Membrane protein GlpM/YdgC XM56_08295 IPR011006 CheY-like superfamily XM56_08295 IPR016032 Signal transduction response regulator, C-terminal effector XM56_08295 IPR001789 Signal transduction response regulator, receiver domain XM56_08295 IPR000792 Transcription regulator LuxR, C-terminal XM56_08300 IPR038476 UvrC homology region 2 superfamily XM56_08300 IPR001162 UvrC family homology region XM56_08300 IPR035901 GIY-YIG endonuclease superfamily XM56_08300 IPR000305 GIY-YIG endonuclease XM56_08300 IPR001943 UVR domain XM56_08300 IPR036876 UVR domain superfamily XM56_08300 IPR004791 UvrABC system, subunit C XM56_08300 IPR010994 RuvA domain 2-like XM56_08305 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase XM56_08305 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial XM56_08305 IPR000462 CDP-alcohol phosphatidyltransferase XM56_08325 IPR007684 Zinc finger, Ogr/Delta-type XM56_08360 IPR035089 Tail sheath protein, subtilisin-like domain XM56_08360 IPR020287 Tail sheath protein, C-terminal domain XM56_08370 IPR006842 Transposase (putative), YhgA-like XM56_08370 IPR010106 Recombination-promoting nuclease RpnA XM56_08390 IPR026262 Antitoxin DinJ XM56_08390 IPR007337 RelB antitoxin/Antitoxin DinJ XM56_08390 IPR013321 Arc-type ribbon-helix-helix XM56_08395 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily XM56_08395 IPR004386 Toxin-antitoxin system, YafQ-like toxin XM56_08395 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family XM56_08410 IPR011083 Phage tail collar domain XM56_08410 IPR037053 Phage tail collar domain superfamily XM56_08495 IPR001207 Transposase, mutator type XM56_08505 IPR036390 Winged helix DNA-binding domain superfamily XM56_08505 IPR005119 LysR, substrate-binding XM56_08505 IPR000847 Transcription regulator HTH, LysR XM56_08505 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_08515 IPR018357 Hexapeptide transferase, conserved site XM56_08515 IPR001451 Hexapeptide repeat XM56_08515 IPR011004 Trimeric LpxA-like superfamily XM56_08525 IPR010534 Bacteriophage 933W, GpQ XM56_08530 IPR019689 Toxin GhoT/OrtT XM56_08540 IPR034690 Endolysin T4 type XM56_08540 IPR002196 Glycoside hydrolase, family 24 XM56_08540 IPR023346 Lysozyme-like domain superfamily XM56_08545 IPR029058 Alpha/Beta hydrolase fold XM56_08545 IPR000073 Alpha/beta hydrolase fold-1 XM56_08550 IPR007486 Inner membrane protein YebE XM56_08550 IPR029024 TerB-like XM56_08555 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_08555 IPR036390 Winged helix DNA-binding domain superfamily XM56_08555 IPR005119 LysR, substrate-binding XM56_08555 IPR000847 Transcription regulator HTH, LysR XM56_08560 IPR001466 Beta-lactamase-related XM56_08560 IPR012338 Beta-lactamase/transpeptidase-like XM56_08560 IPR001586 Beta-lactamase, class-C active site XM56_08565 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 XM56_08565 IPR012675 Beta-grasp domain superfamily XM56_08565 IPR031167 OBG-type guanine nucleotide-binding (G) domain XM56_08565 IPR023192 TGS-like domain superfamily XM56_08565 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_08565 IPR004095 TGS XM56_08565 IPR041706 YchF, N-terminal XM56_08565 IPR013029 YchF, C-terminal domain XM56_08565 IPR006073 GTP binding domain XM56_08565 IPR012676 TGS-like XM56_08575 IPR036416 Peptidyl-tRNA hydrolase superfamily XM56_08575 IPR018171 Peptidyl-tRNA hydrolase, conserved site XM56_08575 IPR001328 Peptidyl-tRNA hydrolase XM56_08580 IPR019698 Protein of unknown function DUF2583 XM56_08590 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain XM56_08590 IPR000836 Phosphoribosyltransferase domain XM56_08590 IPR005946 Ribose-phosphate pyrophosphokinase XM56_08590 IPR029057 Phosphoribosyltransferase-like XM56_08590 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type XM56_08590 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site XM56_08595 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup XM56_08595 IPR020568 Ribosomal protein S5 domain 2-type fold XM56_08595 IPR006204 GHMP kinase N-terminal domain XM56_08595 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase XM56_08595 IPR013750 GHMP kinase, C-terminal domain XM56_08595 IPR036554 GHMP kinase, C-terminal domain superfamily XM56_08600 IPR029046 Lipoprotein localisation LolA/LolB/LppX XM56_08600 IPR004565 Outer membrane lipoprotein LolB XM56_08605 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily XM56_08605 IPR018214 Glutamyl-tRNA reductase, conserved site XM56_08605 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal XM56_08605 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily XM56_08605 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase XM56_08605 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain XM56_08605 IPR036291 NAD(P)-binding domain superfamily XM56_08605 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase XM56_08610 IPR004373 Peptide chain release factor 1 XM56_08610 IPR000352 Peptide chain release factor class I XM56_08610 IPR005139 Peptide chain release factor XM56_08615 IPR025714 Methyltransferase domain XM56_08615 IPR002052 DNA methylase, N-6 adenine-specific, conserved site XM56_08615 IPR004556 Methyltransferase HemK-like XM56_08615 IPR040758 Release factor glutamine methyltransferase, N-terminal domain XM56_08615 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific XM56_08615 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XM56_08620 IPR007360 Invasion gene expression up-regulator, SirB XM56_08625 IPR032698 Protein SirB1, N-terminal XM56_08630 IPR013785 Aldolase-type TIM barrel XM56_08630 IPR006218 DAHP synthetase I/KDSA XM56_08630 IPR006269 3-deoxy-8-phosphooctulonate synthase XM56_08640 IPR029787 Nucleotide cyclase XM56_08640 IPR012292 Globin/Protoglobin XM56_08640 IPR039435 Diguanylate cyclase DosC, globin sensor domain XM56_08640 IPR000160 GGDEF domain XM56_08640 IPR009050 Globin-like superfamily XM56_08650 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily XM56_08650 IPR030395 Glycerophosphodiester phosphodiesterase domain XM56_08660 IPR023514 Glyoxylate/hydroxypyruvate reductase A XM56_08660 IPR036291 NAD(P)-binding domain superfamily XM56_08660 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain XM56_08665 IPR023710 Probable phosphatase YcdX XM56_08665 IPR016195 Polymerase/histidinol phosphatase-like XM56_08665 IPR003141 Polymerase/histidinol phosphatase, N-terminal XM56_08665 IPR004013 PHP domain XM56_08670 IPR020945 DMSO/Nitrate reductase chaperone XM56_08670 IPR026269 Tat proofreading chaperone DmsD-type XM56_08670 IPR036411 TorD-like superfamily XM56_08675 IPR010835 Protein of unknown function DUF1439 XM56_08680 IPR011701 Major facilitator superfamily XM56_08680 IPR020846 Major facilitator superfamily domain XM56_08680 IPR036259 MFS transporter superfamily XM56_08680 IPR022855 Multidrug resistance protein MdtH XM56_08695 IPR000182 GNAT domain XM56_08695 IPR016181 Acyl-CoA N-acyltransferase XM56_08700 IPR036390 Winged helix DNA-binding domain superfamily XM56_08700 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_08700 IPR007432 Protein of unknown function DUF480 XM56_08705 IPR000683 Oxidoreductase, N-terminal XM56_08705 IPR036291 NAD(P)-binding domain superfamily XM56_08710 IPR004268 Peptidoglycan biosynthesis protein MurJ XM56_08715 IPR004837 Sodium/calcium exchanger membrane region XM56_08715 IPR004713 Calcium/proton exchanger XM56_08730 IPR036390 Winged helix DNA-binding domain superfamily XM56_08730 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_08730 IPR000847 Transcription regulator HTH, LysR XM56_08730 IPR005119 LysR, substrate-binding XM56_08730 IPR037408 HTH-type transcriptional regulator cbl, PBP2 domain XM56_08735 IPR042295 NarX-like, N-terminal domain superfamily XM56_08735 IPR003660 HAMP domain XM56_08735 IPR003594 Histidine kinase/HSP90-like ATPase XM56_08735 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XM56_08735 IPR005467 Histidine kinase domain XM56_08735 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain XM56_08735 IPR029095 NarX-like, N-terminal XM56_08735 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing XM56_08740 IPR003317 Cytochrome ubiquinol oxidase subunit 2 XM56_08745 IPR002585 Cytochrome ubiquinol oxidase subunit 1 XM56_08750 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_08750 IPR000524 Transcription regulator HTH, GntR XM56_08750 IPR015421 Pyridoxal phosphate-dependent transferase, major domain XM56_08750 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 XM56_08750 IPR015424 Pyridoxal phosphate-dependent transferase XM56_08750 IPR004839 Aminotransferase, class I/classII XM56_08750 IPR036390 Winged helix DNA-binding domain superfamily XM56_08755 IPR004636 Acetylornithine/Succinylornithine transaminase family XM56_08755 IPR015421 Pyridoxal phosphate-dependent transferase, major domain XM56_08755 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 XM56_08755 IPR015424 Pyridoxal phosphate-dependent transferase XM56_08755 IPR005814 Aminotransferase class-III XM56_08755 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria XM56_08755 IPR026330 Succinylornithine transaminase XM56_08760 IPR007041 Arginine N-succinyltransferase AstA/AruG XM56_08760 IPR017650 Arginine N-succinyltransferase XM56_08760 IPR016181 Acyl-CoA N-acyltransferase XM56_08765 IPR016160 Aldehyde dehydrogenase, cysteine active site XM56_08765 IPR016161 Aldehyde/histidinol dehydrogenase XM56_08765 IPR017649 Succinylglutamate-semialdehyde dehydrogenase XM56_08765 IPR016163 Aldehyde dehydrogenase, C-terminal XM56_08765 IPR015590 Aldehyde dehydrogenase domain XM56_08765 IPR029510 Aldehyde dehydrogenase, glutamic acid active site XM56_08765 IPR016162 Aldehyde dehydrogenase, N-terminal XM56_08770 IPR037031 Succinylarginine dihydrolase superfamily XM56_08770 IPR007079 Succinylarginine dihydrolase XM56_08775 IPR016681 Succinylglutamate desuccinylase XM56_08775 IPR007036 Succinylglutamate desuccinylase/aspartoacylase XM56_08780 IPR023614 Porin domain superfamily XM56_08780 IPR001702 Porin, Gram-negative type XM56_08780 IPR013793 Porin, Gram-negative type, conserved site XM56_08780 IPR033900 Porin domain, Gram-negative type XM56_08780 IPR001897 Porin, gammaproteobacterial XM56_08785 IPR012337 Ribonuclease H-like superfamily XM56_08785 IPR025948 HTH-like domain XM56_08785 IPR036397 Ribonuclease H superfamily XM56_08785 IPR001584 Integrase, catalytic core XM56_08805 IPR011059 Metal-dependent hydrolase, composite domain superfamily XM56_08805 IPR032466 Metal-dependent hydrolase XM56_08805 IPR006680 Amidohydrolase-related XM56_08805 IPR005920 Imidazolonepropionase XM56_08810 IPR036390 Winged helix DNA-binding domain superfamily XM56_08810 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_08810 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily XM56_08810 IPR010248 Histidine utilization repressor XM56_08810 IPR000524 Transcription regulator HTH, GntR XM56_08810 IPR011663 UbiC transcription regulator-associated XM56_08815 IPR032466 Metal-dependent hydrolase XM56_08815 IPR011059 Metal-dependent hydrolase, composite domain superfamily XM56_08815 IPR023512 Deaminase MtaD/DadD XM56_08815 IPR006680 Amidohydrolase-related XM56_08820 IPR010282 Uncharacterised protein family HutD/Ves XM56_08820 IPR011051 RmlC-like cupin domain superfamily XM56_08820 IPR014710 RmlC-like jelly roll fold XM56_08820 IPR023482 Uncharacterised protein family Ves XM56_08825 IPR015304 ZinT domain XM56_08825 IPR012674 Calycin XM56_08850 IPR011055 Duplicated hybrid motif XM56_08850 IPR016047 Peptidase M23 XM56_08850 IPR036779 LysM domain superfamily XM56_08850 IPR018392 LysM domain XM56_08855 IPR013785 Aldolase-type TIM barrel XM56_08855 IPR000771 Fructose-bisphosphate aldolase, class-II XM56_08855 IPR023788 D-tagatose-bisphosphate aldolase, class II, subunit KbaY XM56_08855 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY XM56_08860 IPR035466 GlmS/AgaS, SIS domain 1 XM56_08860 IPR001347 Sugar isomerase (SIS) XM56_08860 IPR035464 AgaS, SIS domain XM56_08860 IPR014180 Sugar isomerase, AgaS XM56_08865 IPR004701 Phosphotransferase system, mannose-type IIA component XM56_08865 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily XM56_08865 IPR033887 PTS system mannose/sorbose specific IIA subunit XM56_08870 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component XM56_08875 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit XM56_08880 IPR004720 Phosphotransferase system, sorbose subfamily IIB component XM56_08880 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup XM56_08880 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily XM56_08885 IPR023435 D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit KbaZ XM56_08885 IPR013785 Aldolase-type TIM barrel XM56_08885 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ-like XM56_08890 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_08890 IPR018356 Transcription regulator, HTH DeoR-type, conserved site XM56_08890 IPR014036 DeoR C-terminal sensor domain XM56_08890 IPR001034 DeoR-type HTH domain XM56_08890 IPR037171 NagB/RpiA transferase-like XM56_08890 IPR036390 Winged helix DNA-binding domain superfamily XM56_08910 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F XM56_08910 IPR002942 RNA-binding S4 domain XM56_08910 IPR020103 Pseudouridine synthase, catalytic domain superfamily XM56_08910 IPR006145 Pseudouridine synthase, RsuA/RluA XM56_08910 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain XM56_08910 IPR036986 RNA-binding S4 domain superfamily XM56_08910 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site XM56_08915 IPR004445 Sodium/glutamate symport carrier protein GltS XM56_08925 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal XM56_08925 IPR003346 Transposase, IS116/IS110/IS902 XM56_08930 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal XM56_08930 IPR003346 Transposase, IS116/IS110/IS902 XM56_08935 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XM56_08935 IPR010017 tRNA U34 carboxymethyltransferase XM56_08935 IPR027555 tRNA (mo5U34)-methyltransferase-like XM56_08940 IPR041698 Methyltransferase domain 25 XM56_08940 IPR005271 Carboxy-S-adenosyl-L-methionine synthase XM56_08940 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XM56_08945 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily XM56_08945 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein XM56_08950 IPR036520 UPF0759 superfamily XM56_08950 IPR002763 Protein of unknown function DUF72 XM56_08955 IPR036380 Isochorismatase-like superfamily XM56_08955 IPR000868 Isochorismatase-like XM56_08965 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb XM56_08965 IPR004524 Aspartate-tRNA ligase, type 1 XM56_08965 IPR006195 Aminoacyl-tRNA synthetase, class II XM56_08965 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) XM56_08965 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type XM56_08965 IPR004115 GAD-like domain superfamily XM56_08965 IPR029351 GAD domain XM56_08965 IPR012340 Nucleic acid-binding, OB-fold XM56_08970 IPR020084 NUDIX hydrolase, conserved site XM56_08970 IPR000086 NUDIX hydrolase domain XM56_08970 IPR003564 Dihydroneopterin triphosphate diphosphatase XM56_08970 IPR015797 NUDIX hydrolase-like domain superfamily XM56_08975 IPR029072 YebC-like XM56_08975 IPR026564 Transcriptional regulator TACO1-like, domain 3 XM56_08975 IPR017856 Integrase-like, N-terminal XM56_08975 IPR002876 Transcriptional regulator TACO1-like XM56_08980 IPR012337 Ribonuclease H-like superfamily XM56_08980 IPR036397 Ribonuclease H superfamily XM56_08980 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site XM56_08980 IPR002176 Crossover junction endodeoxyribonuclease RuvC XM56_08985 IPR011114 Holliday junction DNA helicase RuvA, C-terminal XM56_08985 IPR010994 RuvA domain 2-like XM56_08985 IPR000085 Bacterial DNA recombination protein RuvA XM56_08985 IPR012340 Nucleic acid-binding, OB-fold XM56_08985 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 XM56_08985 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial XM56_08985 IPR036267 RuvA, C-terminal domain superfamily XM56_08990 IPR004605 DNA helicase, Holliday junction RuvB-type XM56_08990 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_08990 IPR036390 Winged helix DNA-binding domain superfamily XM56_08990 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_08990 IPR008823 RuvB C-terminal winged helix domain XM56_08990 IPR041445 RuvB, AAA lid domain XM56_08990 IPR008824 RuvB-like P-loop domain XM56_08990 IPR003593 AAA+ ATPase domain XM56_08995 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site XM56_08995 IPR023778 Amino acid/peptide transporter family, dipeptide/tripeptide permease B XM56_08995 IPR005279 Dipeptide/tripeptide permease XM56_08995 IPR036259 MFS transporter superfamily XM56_08995 IPR000109 Proton-dependent oligopeptide transporter family XM56_09000 IPR001626 ABC transporter, TroCD-like XM56_09000 IPR037294 ABC transporter, BtuC-like XM56_09005 IPR017882 Zinc import ATP-binding protein ZnuC XM56_09005 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_09005 IPR003439 ABC transporter-like XM56_09005 IPR003593 AAA+ ATPase domain XM56_09010 IPR006127 Periplasmic solute binding protein, ZnuA-like XM56_09010 IPR035520 High-affinity zinc uptake system protein ZnuA XM56_09015 IPR011055 Duplicated hybrid motif XM56_09015 IPR016047 Peptidase M23 XM56_09015 IPR018392 LysM domain XM56_09015 IPR013731 Opacity-associated protein A, N-terminal XM56_09020 IPR004960 Bacterial lipid A biosynthesis acyltransferase XM56_09020 IPR011921 Lipid A biosynthesis myristoyltransferase XM56_09030 IPR001207 Transposase, mutator type XM56_09035 IPR015795 Pyruvate kinase, C-terminal XM56_09035 IPR001697 Pyruvate kinase XM56_09035 IPR015793 Pyruvate kinase, barrel XM56_09035 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily XM56_09035 IPR011037 Pyruvate kinase-like, insert domain superfamily XM56_09035 IPR018209 Pyruvate kinase, active site XM56_09035 IPR040442 Pyruvate kinase-like domain superfamily XM56_09035 IPR036918 Pyruvate kinase, C-terminal domain superfamily XM56_09035 IPR015806 Pyruvate kinase, insert domain superfamily XM56_09040 IPR001347 Sugar isomerase (SIS) XM56_09040 IPR009057 Homeobox-like domain superfamily XM56_09040 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_09040 IPR000281 Helix-turn-helix protein RpiR XM56_09040 IPR035472 RpiR-like, SIS domain XM56_09045 IPR001282 Glucose-6-phosphate dehydrogenase XM56_09045 IPR019796 Glucose-6-phosphate dehydrogenase, active site XM56_09045 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal XM56_09045 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding XM56_09045 IPR036291 NAD(P)-binding domain superfamily XM56_09050 IPR031337 KDPG/KHG aldolase, active site 1 XM56_09050 IPR031338 KDPG/KHG aldolase, active site 2 XM56_09050 IPR000887 KDPG/KHG aldolase XM56_09050 IPR013785 Aldolase-type TIM barrel XM56_09055 IPR023740 Spermidine export protein MdtJ XM56_09055 IPR000390 Small multidrug resistance protein family XM56_09060 IPR000390 Small multidrug resistance protein family XM56_09060 IPR023737 Spermidine export protein MdtI XM56_09065 IPR006175 YjgF/YER057c/UK114 family XM56_09065 IPR035709 RutC family, YoaB-like XM56_09065 IPR035959 RutC-like superfamily XM56_09065 IPR019897 RidA, conserved site XM56_09070 IPR006555 ATP-dependent helicase, C-terminal XM56_09070 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type XM56_09070 IPR014001 Helicase superfamily 1/2, ATP-binding domain XM56_09070 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_09070 IPR006935 Helicase/UvrB, N-terminal XM56_09075 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB XM56_09075 IPR000905 Gcp-like domain XM56_09080 IPR004658 Outer membrane lipoprotein Slp XM56_09085 IPR042099 AMP-dependent synthetase-like superfamily XM56_09085 IPR000873 AMP-dependent synthetase/ligase XM56_09085 IPR020845 AMP-binding, conserved site XM56_09085 IPR025110 AMP-binding enzyme, C-terminal domain XM56_09090 IPR002562 3'-5' exonuclease domain XM56_09090 IPR002121 HRDC domain XM56_09090 IPR006292 Ribonuclease D XM56_09090 IPR010997 HRDC-like superfamily XM56_09090 IPR012337 Ribonuclease H-like superfamily XM56_09090 IPR036397 Ribonuclease H superfamily XM56_09095 IPR005527 Cell division topological specificity factor MinE XM56_09095 IPR036707 Cell division topological specificity factor MinE superfamily XM56_09100 IPR010223 ATP binding protein MinD, bacterial-type XM56_09100 IPR025501 ATP binding protein MinD XM56_09100 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain XM56_09100 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_09105 IPR013033 Septum formation inhibitor MinC XM56_09105 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal XM56_09105 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily XM56_09105 IPR005526 Septum formation inhibitor MinC, C-terminal XM56_09105 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily XM56_09105 IPR007874 Septum formation inhibitor MinC, N-terminal XM56_09115 IPR027354 YcgL domain XM56_09115 IPR038068 YcgL-like superfamily XM56_09120 IPR031304 Transglycosylase SLT domain 2 XM56_09120 IPR023346 Lysozyme-like domain superfamily XM56_09120 IPR011757 Lytic transglycosylase MltB XM56_09125 IPR011234 Fumarylacetoacetase-like, C-terminal XM56_09125 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily XM56_09130 IPR008228 Uncharacterised conserved protein UCP006173 XM56_09130 IPR005358 Putative zinc- or iron-chelating domain containing protein XM56_09155 IPR006685 Mechanosensitive ion channel MscS XM56_09155 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 XM56_09155 IPR023408 Mechanosensitive ion channel MscS domain superfamily XM56_09155 IPR010920 LSM domain superfamily XM56_09155 IPR011066 Mechanosensitive ion channel MscS, C-terminal XM56_09155 IPR006686 Mechanosensitive ion channel MscS, conserved site XM56_09160 IPR004045 Glutathione S-transferase, N-terminal XM56_09160 IPR040079 Glutathione Transferase family XM56_09160 IPR036282 Glutathione S-transferase, C-terminal domain superfamily XM56_09160 IPR010987 Glutathione S-transferase, C-terminal-like XM56_09160 IPR036249 Thioredoxin-like superfamily XM56_09160 IPR034338 Glutathione S-transferases, subfamily 4, C-terminal XM56_09180 IPR009950 Protein of unknown function DUF1480 XM56_09185 IPR003018 GAF domain XM56_09185 IPR029016 GAF-like domain superfamily XM56_09185 IPR000160 GGDEF domain XM56_09185 IPR029787 Nucleotide cyclase XM56_09185 IPR001633 EAL domain XM56_09185 IPR035919 EAL domain superfamily XM56_09185 IPR016132 Phytochrome chromophore attachment domain XM56_09185 IPR001294 Phytochrome XM56_09185 IPR013515 Phytochrome, central region XM56_09220 IPR036259 MFS transporter superfamily XM56_09220 IPR020846 Major facilitator superfamily domain XM56_09220 IPR011701 Major facilitator superfamily XM56_09225 IPR005119 LysR, substrate-binding XM56_09225 IPR037417 HTH-type transcriptional regulator SyrM, PBP2 domain XM56_09225 IPR000847 Transcription regulator HTH, LysR XM56_09225 IPR036390 Winged helix DNA-binding domain superfamily XM56_09225 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_09230 IPR003399 Mce/MlaD XM56_09235 IPR011031 Multihaem cytochrome XM56_09235 IPR007498 Intermembrane transport protein PqiA-like XM56_09235 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type XM56_09240 IPR000614 Free Met sulfoxide reductase conserved site XM56_09240 IPR003018 GAF domain XM56_09240 IPR029016 GAF-like domain superfamily XM56_09245 IPR016103 ProQ/FinO domain XM56_09245 IPR036442 ProQ/FinO domain superfamily XM56_09245 IPR035236 RNA chaperone ProQ, C-terminal XM56_09245 IPR023529 RNA chaperone ProQ XM56_09250 IPR004447 C-terminal-processing peptidase S41A XM56_09250 IPR036034 PDZ superfamily XM56_09250 IPR001478 PDZ domain XM56_09250 IPR005151 Tail specific protease XM56_09250 IPR020992 Tail specific protease, C-terminal XM56_09250 IPR029045 ClpP/crotonase-like domain superfamily XM56_09250 IPR040573 Tail specific protease, N-terminal domain XM56_09255 IPR022919 Peptidase M48, protease HtpX, putative XM56_09255 IPR001915 Peptidase M48 XM56_09270 IPR015943 WD40/YVTN repeat-like-containing domain superfamily XM56_09270 IPR027946 Oligogalacturonate lyase domain XM56_09275 IPR036390 Winged helix DNA-binding domain superfamily XM56_09275 IPR029016 GAF-like domain superfamily XM56_09275 IPR011991 ArsR-like helix-turn-helix domain XM56_09275 IPR005471 Transcription regulator IclR, N-terminal XM56_09275 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_09275 IPR014757 Transcription regulator IclR, C-terminal XM56_09280 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily XM56_09280 IPR036365 PGBD-like superfamily XM56_09280 IPR036366 PGBD superfamily XM56_09280 IPR002502 N-acetylmuramoyl-L-alanine amidase domain XM56_09290 IPR007404 LexA-binding, inner membrane-associated putative hydrolase XM56_09290 IPR016956 Inner membrane protein YdjM XM56_09300 IPR009331 Oligogalacturonate-specific porin XM56_09305 IPR006059 Bacterial extracellular solute-binding protein XM56_09310 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_09310 IPR040582 MalK, OB fold domain XM56_09310 IPR003439 ABC transporter-like XM56_09310 IPR008995 Molybdate/tungstate binding, C-terminal XM56_09310 IPR003593 AAA+ ATPase domain XM56_09310 IPR017871 ABC transporter, conserved site XM56_09310 IPR005116 Transport-associated OB, type 1 XM56_09315 IPR035906 MetI-like superfamily XM56_09315 IPR000515 ABC transporter type 1, transmembrane domain MetI-like XM56_09320 IPR000515 ABC transporter type 1, transmembrane domain MetI-like XM56_09320 IPR035906 MetI-like superfamily XM56_09325 IPR010702 Periplasmic pectate lyase XM56_09330 IPR036291 NAD(P)-binding domain superfamily XM56_09330 IPR020904 Short-chain dehydrogenase/reductase, conserved site XM56_09330 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase XM56_09330 IPR002347 Short-chain dehydrogenase/reductase SDR XM56_09335 IPR014710 RmlC-like jelly roll fold XM56_09335 IPR007045 5-keto 4-deoxyuronate isomerase XM56_09335 IPR021120 KduI/IolB isomerase XM56_09335 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal XM56_09335 IPR011051 RmlC-like cupin domain superfamily XM56_09340 IPR013096 Cupin 2, conserved barrel XM56_09340 IPR011051 RmlC-like cupin domain superfamily XM56_09340 IPR014710 RmlC-like jelly roll fold XM56_09340 IPR025499 Pectin degradation protein KdgF XM56_09345 IPR036412 HAD-like superfamily XM56_09345 IPR023214 HAD superfamily XM56_09345 IPR023198 Phosphoglycolate phosphatase-like, domain 2 XM56_09345 IPR041492 Haloacid dehalogenase-like hydrolase XM56_09345 IPR006439 HAD hydrolase, subfamily IA XM56_09350 IPR025229 YniB-like protein XM56_09355 IPR005119 LysR, substrate-binding XM56_09355 IPR000847 Transcription regulator HTH, LysR XM56_09355 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_09355 IPR036390 Winged helix DNA-binding domain superfamily XM56_09360 IPR003702 Acetyl-CoA hydrolase/transferase XM56_09360 IPR037171 NagB/RpiA transferase-like XM56_09360 IPR017821 Succinate CoA transferase XM56_09360 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily XM56_09360 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain XM56_09365 IPR029045 ClpP/crotonase-like domain superfamily XM56_09365 IPR014748 Enoyl-CoA hydratase, C-terminal XM56_09365 IPR001753 Enoyl-CoA hydratase/isomerase XM56_09365 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site XM56_09370 IPR005129 SIMIBI class G3E GTPase, ArgK/MeaB XM56_09370 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_09375 IPR036724 Cobalamin-binding domain superfamily XM56_09375 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic XM56_09375 IPR006158 Cobalamin (vitamin B12)-binding domain XM56_09375 IPR006159 Methylmalonyl-CoA mutase, C-terminal XM56_09375 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic XM56_09375 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic XM56_09385 IPR001626 ABC transporter, TroCD-like XM56_09385 IPR037294 ABC transporter, BtuC-like XM56_09390 IPR037294 ABC transporter, BtuC-like XM56_09390 IPR001626 ABC transporter, TroCD-like XM56_09395 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_09395 IPR017871 ABC transporter, conserved site XM56_09395 IPR003439 ABC transporter-like XM56_09395 IPR003593 AAA+ ATPase domain XM56_09400 IPR006128 Adhesion lipoprotein XM56_09400 IPR006127 Periplasmic solute binding protein, ZnuA-like XM56_09400 IPR006129 Adhesin B XM56_09405 IPR000189 Prokaryotic transglycosylase, active site XM56_09405 IPR023346 Lysozyme-like domain superfamily XM56_09405 IPR008258 Transglycosylase SLT domain 1 XM56_09405 IPR023946 Endo-type membrane-bound lytic murein transglycosylase A XM56_09410 IPR002771 Multiple antibiotic resistance (MarC)-related XM56_09435 IPR007563 Protein of unknown function DUF554 XM56_09440 IPR025309 KTSC domain XM56_09445 IPR004154 Anticodon-binding XM56_09445 IPR036621 Anticodon-binding domain superfamily XM56_09445 IPR012675 Beta-grasp domain superfamily XM56_09445 IPR004095 TGS XM56_09445 IPR012676 TGS-like XM56_09445 IPR002320 Threonine-tRNA ligase, class IIa XM56_09445 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily XM56_09445 IPR033728 Threonine-tRNA ligase catalytic core domain XM56_09445 IPR012947 Threonyl/alanyl tRNA synthetase, SAD XM56_09445 IPR006195 Aminoacyl-tRNA synthetase, class II XM56_09445 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) XM56_09450 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily XM56_09450 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily XM56_09450 IPR019813 Translation initiation factor 3, conserved site XM56_09450 IPR019814 Translation initiation factor 3, N-terminal XM56_09450 IPR001288 Translation initiation factor 3 XM56_09450 IPR019815 Translation initiation factor 3, C-terminal XM56_09455 IPR037229 Ribosomal protein L35 superfamily XM56_09455 IPR021137 Ribosomal protein L35 XM56_09455 IPR018265 Ribosomal protein L35, conserved site XM56_09455 IPR001706 Ribosomal protein L35, non-mitochondrial XM56_09460 IPR035566 Ribosomal protein L20, C-terminal XM56_09460 IPR005813 Ribosomal protein L20 XM56_09465 IPR006195 Aminoacyl-tRNA synthetase, class II XM56_09465 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial XM56_09465 IPR002319 Phenylalanyl-tRNA synthetase XM56_09465 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm XM56_09465 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal XM56_09465 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit XM56_09470 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit XM56_09470 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 XM56_09470 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain XM56_09470 IPR002547 tRNA-binding domain XM56_09470 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain XM56_09470 IPR005147 tRNA synthetase, B5-domain XM56_09470 IPR012340 Nucleic acid-binding, OB-fold XM56_09470 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily XM56_09470 IPR005121 Ferrodoxin-fold anticodon-binding domain XM56_09470 IPR009061 Putative DNA-binding domain superfamily XM56_09470 IPR005146 B3/B4 tRNA-binding domain XM56_09475 IPR005684 Integration host factor, alpha subunit XM56_09475 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily XM56_09475 IPR020816 Histone-like DNA-binding protein, conserved site XM56_09475 IPR000119 Histone-like DNA-binding protein XM56_09480 IPR007829 TM2 domain XM56_09490 IPR000522 ABC transporter, permease protein, BtuC-like XM56_09490 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC XM56_09490 IPR037294 ABC transporter, BtuC-like XM56_09495 IPR036249 Thioredoxin-like superfamily XM56_09495 IPR029760 Glutathione peroxidase conserved site XM56_09495 IPR029759 Glutathione peroxidase active site XM56_09495 IPR000889 Glutathione peroxidase XM56_09495 IPR033674 Thioredoxin/glutathione peroxidase BtuE XM56_09500 IPR003593 AAA+ ATPase domain XM56_09500 IPR003439 ABC transporter-like XM56_09500 IPR023693 ABC transporter, vitamin B12, BtuD XM56_09500 IPR017871 ABC transporter, conserved site XM56_09500 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_09505 IPR015421 Pyridoxal phosphate-dependent transferase, major domain XM56_09505 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 XM56_09505 IPR015424 Pyridoxal phosphate-dependent transferase XM56_09505 IPR022850 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase, ArnB XM56_09505 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase XM56_09510 IPR001173 Glycosyltransferase 2-like XM56_09510 IPR029044 Nucleotide-diphospho-sugar transferases XM56_09510 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase XM56_09515 IPR002376 Formyl transferase, N-terminal XM56_09515 IPR005793 Formyl transferase, C-terminal XM56_09515 IPR001509 NAD-dependent epimerase/dehydratase XM56_09515 IPR021168 Bifunctional polymyxin resistance protein, ArnA XM56_09515 IPR011034 Formyl transferase-like, C-terminal domain superfamily XM56_09515 IPR036477 Formyl transferase, N-terminal domain superfamily XM56_09515 IPR036291 NAD(P)-binding domain superfamily XM56_09520 IPR023557 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD, probable XM56_09520 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel XM56_09520 IPR002509 NodB homology domain XM56_09525 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase XM56_09525 IPR003342 Glycosyl transferase family 39/83 XM56_09530 IPR000390 Small multidrug resistance protein family XM56_09530 IPR022883 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase, subunit ArnE XM56_09530 IPR000620 EamA domain XM56_09535 IPR000390 Small multidrug resistance protein family XM56_09535 IPR022832 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF XM56_09540 IPR038765 Papain-like cysteine peptidase superfamily XM56_09540 IPR000064 Endopeptidase, NLPC/P60 domain XM56_09545 IPR004562 Lipoyltransferase/lipoate-protein ligase XM56_09545 IPR019491 Lipoate protein ligase, C-terminal XM56_09545 IPR023741 Lipoate-protein ligase A XM56_09545 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain XM56_09550 IPR003846 Protein adenylyltransferase SelO XM56_09555 IPR002491 ABC transporter periplasmic binding domain XM56_09560 IPR007845 Haemin-degrading HemS/ChuX domain XM56_09565 IPR037066 TonB-dependent receptor, plug domain superfamily XM56_09565 IPR039426 Vitamin B12 transporter BtuB-like XM56_09565 IPR010916 TonB box, conserved site XM56_09565 IPR000531 TonB-dependent receptor-like, beta-barrel XM56_09565 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor XM56_09565 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily XM56_09565 IPR011276 TonB-dependent haem/haemoglobin receptor XM56_09565 IPR012910 TonB-dependent receptor, plug domain XM56_09570 IPR019600 Hemin uptake protein HemP XM56_09575 IPR006218 DAHP synthetase I/KDSA XM56_09575 IPR006219 DHAP synthase, class 1 XM56_09575 IPR013785 Aldolase-type TIM barrel XM56_09580 IPR026530 Phosphoenolpyruvate synthase regulatory protein XM56_09580 IPR008917 Transcription factor, Skn-1-like, DNA-binding domain superfamily XM56_09580 IPR005177 Bifunctional kinase-pyrophosphorylase XM56_09585 IPR006319 Phosphoenolpyruvate synthase XM56_09585 IPR023151 PEP-utilising enzyme, conserved site XM56_09585 IPR036637 Phosphohistidine domain superfamily XM56_09585 IPR000121 PEP-utilising enzyme, C-terminal XM56_09585 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding XM56_09585 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily XM56_09585 IPR008279 PEP-utilising enzyme, mobile domain XM56_09585 IPR040442 Pyruvate kinase-like domain superfamily XM56_09585 IPR013815 ATP-grasp fold, subdomain 1 XM56_09585 IPR018274 PEP-utilising enzyme, active site XM56_09590 IPR002549 Transmembrane protein TqsA-like XM56_09595 IPR004113 FAD-linked oxidase, C-terminal XM56_09595 IPR006094 FAD linked oxidase, N-terminal XM56_09595 IPR016164 FAD-linked oxidase-like, C-terminal XM56_09595 IPR036318 FAD-binding, type PCMH-like superfamily XM56_09595 IPR016166 FAD-binding domain, PCMH-type XM56_09595 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site XM56_09595 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain XM56_09595 IPR009051 Alpha-helical ferredoxin XM56_09605 IPR029069 HotDog domain superfamily XM56_09605 IPR003736 Phenylacetic acid degradation-related domain XM56_09605 IPR030863 1,4-dihydroxy-2-naphthoyl-CoA hydrolase, MenI XM56_09605 IPR006683 Thioesterase domain XM56_09610 IPR011298 FeS assembly scaffold SufA XM56_09610 IPR017870 FeS cluster insertion, C-terminal, conserved site XM56_09610 IPR016092 FeS cluster insertion protein XM56_09610 IPR000361 FeS cluster biogenesis XM56_09610 IPR035903 HesB-like domain superfamily XM56_09615 IPR010231 SUF system FeS cluster assembly, SufB XM56_09615 IPR000825 SUF system FeS cluster assembly, SufBD XM56_09615 IPR037284 SUF system FeS cluster assembly, SufBD superfamily XM56_09620 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_09620 IPR017871 ABC transporter, conserved site XM56_09620 IPR003439 ABC transporter-like XM56_09620 IPR010230 FeS cluster assembly SUF system, ATPase SufC XM56_09620 IPR003593 AAA+ ATPase domain XM56_09625 IPR011542 SUF system FeS cluster assembly, SufD XM56_09625 IPR037284 SUF system FeS cluster assembly, SufBD superfamily XM56_09625 IPR000825 SUF system FeS cluster assembly, SufBD XM56_09630 IPR010970 Cysteine desulfurase, SufS XM56_09630 IPR015421 Pyridoxal phosphate-dependent transferase, major domain XM56_09630 IPR015424 Pyridoxal phosphate-dependent transferase XM56_09630 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site XM56_09630 IPR000192 Aminotransferase class V domain XM56_09630 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 XM56_09635 IPR003808 Fe-S metabolism associated domain, SufE-like XM56_09635 IPR023939 Cysteine desulfuration protein SufE XM56_09640 IPR041597 L,D-transpeptidase C-terminal domain XM56_09640 IPR005490 L,D-transpeptidase catalytic domain XM56_09640 IPR038063 L,D-transpeptidase catalytic domain-like XM56_09640 IPR018392 LysM domain XM56_09645 IPR006817 Lipoprotein leucine-zipper XM56_09645 IPR016367 Murein-lipoprotein XM56_09650 IPR040442 Pyruvate kinase-like domain superfamily XM56_09650 IPR015806 Pyruvate kinase, insert domain superfamily XM56_09650 IPR036918 Pyruvate kinase, C-terminal domain superfamily XM56_09650 IPR015795 Pyruvate kinase, C-terminal XM56_09650 IPR011037 Pyruvate kinase-like, insert domain superfamily XM56_09650 IPR015793 Pyruvate kinase, barrel XM56_09650 IPR001697 Pyruvate kinase XM56_09650 IPR018209 Pyruvate kinase, active site XM56_09650 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily XM56_09660 IPR002528 Multi antimicrobial extrusion protein XM56_09660 IPR022913 Multidrug resistance protein MdtK XM56_09665 IPR001783 Lumazine-binding protein XM56_09665 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily XM56_09665 IPR026017 Lumazine-binding domain XM56_09665 IPR017938 Riboflavin synthase-like beta-barrel XM56_09670 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XM56_09670 IPR003333 Mycolic acid cyclopropane synthase XM56_09675 IPR004812 Drug resistance transporter Bcr/CmlA subfamily XM56_09675 IPR011701 Major facilitator superfamily XM56_09675 IPR036259 MFS transporter superfamily XM56_09675 IPR020846 Major facilitator superfamily domain XM56_09680 IPR005119 LysR, substrate-binding XM56_09680 IPR000847 Transcription regulator HTH, LysR XM56_09680 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_09680 IPR036390 Winged helix DNA-binding domain superfamily XM56_09685 IPR010982 Lambda repressor-like, DNA-binding domain superfamily XM56_09685 IPR000843 LacI-type HTH domain XM56_09685 IPR023588 Transcription regulator HTH, PurR XM56_09685 IPR028082 Periplasmic binding protein-like I XM56_09690 IPR001189 Manganese/iron superoxide dismutase XM56_09690 IPR019832 Manganese/iron superoxide dismutase, C-terminal XM56_09690 IPR019833 Manganese/iron superoxide dismutase, binding site XM56_09690 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily XM56_09690 IPR019831 Manganese/iron superoxide dismutase, N-terminal XM56_09690 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily XM56_09695 IPR000064 Endopeptidase, NLPC/P60 domain XM56_09695 IPR038765 Papain-like cysteine peptidase superfamily XM56_09700 IPR033658 Glutaredoxin, PICOT-like XM56_09700 IPR014434 Monothiol glutaredoxin XM56_09700 IPR002109 Glutaredoxin XM56_09700 IPR004480 Monothiol glutaredoxin-related XM56_09700 IPR036249 Thioredoxin-like superfamily XM56_09705 IPR012337 Ribonuclease H-like superfamily XM56_09705 IPR036397 Ribonuclease H superfamily XM56_09705 IPR013520 Exonuclease, RNase T/DNA polymerase III XM56_09705 IPR005987 Ribonuclease T XM56_09710 IPR037523 Vicinal oxygen chelate (VOC) domain XM56_09710 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase XM56_09710 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain XM56_09710 IPR018146 Glyoxalase I, conserved site XM56_09710 IPR004361 Glyoxalase I XM56_09715 IPR013785 Aldolase-type TIM barrel XM56_09715 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal XM56_09720 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily XM56_09720 IPR009057 Homeobox-like domain superfamily XM56_09720 IPR001647 DNA-binding HTH domain, TetR-type XM56_09720 IPR011075 Tetracyclin repressor-like, C-terminal domain XM56_09725 IPR000917 Sulfatase, N-terminal XM56_09725 IPR040423 Phosphoethanolamine transferase XM56_09725 IPR017850 Alkaline-phosphatase-like, core domain superfamily XM56_09725 IPR012549 Phosphoethanolamine transferase, N-terminal XM56_09730 IPR010710 Protein of unknown function DUF1289 XM56_09735 IPR036812 NADP-dependent oxidoreductase domain superfamily XM56_09735 IPR023210 NADP-dependent oxidoreductase domain XM56_09735 IPR020471 Aldo/keto reductase XM56_09740 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein XM56_09745 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain XM56_09745 IPR006143 RND efflux pump, membrane fusion protein XM56_09750 IPR012451 Protein of unknown function DUF1656 XM56_09755 IPR000835 MarR-type HTH domain XM56_09755 IPR023187 Transcriptional regulator MarR-type, conserved site XM56_09755 IPR023071 Transcriptional regulator, SlyA XM56_09755 IPR036390 Winged helix DNA-binding domain superfamily XM56_09755 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_09760 IPR008816 Glycine zipper 2TM domain XM56_09765 IPR005338 Anhydro-N-acetylmuramic acid kinase XM56_09770 IPR018660 C-type lysozyme inhibitor XM56_09770 IPR036328 C-type lysozyme inhibitor superfamily XM56_09775 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal XM56_09775 IPR000659 Pyridoxamine 5'-phosphate oxidase XM56_09775 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site XM56_09775 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative XM56_09775 IPR012349 FMN-binding split barrel XM56_09780 IPR002942 RNA-binding S4 domain XM56_09780 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site XM56_09780 IPR002305 Aminoacyl-tRNA synthetase, class Ic XM56_09780 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XM56_09780 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 XM56_09780 IPR024088 Tyrosine-tRNA ligase, bacterial-type XM56_09780 IPR036986 RNA-binding S4 domain superfamily XM56_09780 IPR002307 Tyrosine-tRNA ligase XM56_09785 IPR023685 Pyridoxal kinase PdxY XM56_09785 IPR029056 Ribokinase-like XM56_09785 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase XM56_09785 IPR004625 Pyridoxine kinase XM56_09790 IPR036249 Thioredoxin-like superfamily XM56_09790 IPR004045 Glutathione S-transferase, N-terminal XM56_09790 IPR010987 Glutathione S-transferase, C-terminal-like XM56_09790 IPR040079 Glutathione Transferase family XM56_09790 IPR004046 Glutathione S-transferase, C-terminal XM56_09790 IPR036282 Glutathione S-transferase, C-terminal domain superfamily XM56_09795 IPR020317 Uncharacterised protein family YjbD XM56_09800 IPR006977 Yip1 domain XM56_09810 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site XM56_09810 IPR000109 Proton-dependent oligopeptide transporter family XM56_09810 IPR005279 Dipeptide/tripeptide permease XM56_09810 IPR023517 Amino acid/peptide transporter family, dipeptide and tripeptide permease A XM56_09810 IPR036259 MFS transporter superfamily XM56_09815 IPR036390 Winged helix DNA-binding domain superfamily XM56_09815 IPR000847 Transcription regulator HTH, LysR XM56_09815 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_09815 IPR005119 LysR, substrate-binding XM56_09830 IPR003439 ABC transporter-like XM56_09830 IPR017871 ABC transporter, conserved site XM56_09830 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_09830 IPR003593 AAA+ ATPase domain XM56_09835 IPR003593 AAA+ ATPase domain XM56_09835 IPR003439 ABC transporter-like XM56_09835 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_09835 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal XM56_09840 IPR000515 ABC transporter type 1, transmembrane domain MetI-like XM56_09840 IPR025966 Oligopeptide transport permease C-like, N-terminal domain XM56_09840 IPR035906 MetI-like superfamily XM56_09845 IPR000515 ABC transporter type 1, transmembrane domain MetI-like XM56_09845 IPR035906 MetI-like superfamily XM56_09850 IPR000914 Solute-binding protein family 5 domain XM56_09850 IPR023765 Solute-binding protein family 5, conserved site XM56_09850 IPR039424 Solute-binding protein family 5 XM56_09850 IPR030678 Peptide/nickel binding protein, MppA-type XM56_09855 IPR003898 Bordetella pertussis toxin A XM56_09865 IPR002078 RNA polymerase sigma factor 54 interaction domain XM56_09865 IPR002197 DNA binding HTH domain, Fis-type XM56_09865 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_09865 IPR003593 AAA+ ATPase domain XM56_09865 IPR025944 Sigma-54 interaction domain, conserved site XM56_09865 IPR014317 Transcription activator PspF XM56_09865 IPR009057 Homeobox-like domain superfamily XM56_09865 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 XM56_09870 IPR014319 Phage shock protein, PspA XM56_09870 IPR007157 PspA/IM30 XM56_09875 IPR009554 Phage shock protein B XM56_09880 IPR014320 Phage shock protein, PspC XM56_09880 IPR007168 Phage shock protein, PspC, N-terminal XM56_09890 IPR007413 Protein of unknown function DUF463, YcjX-like protein XM56_09895 IPR021147 Protein of unknown function DUF697 XM56_09895 IPR006507 Uncharacterised protein family UPF0283 XM56_09910 IPR025944 Sigma-54 interaction domain, conserved site XM56_09910 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 XM56_09910 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_09910 IPR000014 PAS domain XM56_09910 IPR002912 ACT domain XM56_09910 IPR009057 Homeobox-like domain superfamily XM56_09910 IPR030828 TyrR family, helix-turn-helix domain XM56_09910 IPR003593 AAA+ ATPase domain XM56_09910 IPR035965 PAS domain superfamily XM56_09910 IPR002078 RNA polymerase sigma factor 54 interaction domain XM56_09910 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 XM56_09915 IPR002065 Thiol peroxidase Tpx XM56_09915 IPR018219 Thiol peroxidase conserved site XM56_09915 IPR013766 Thioredoxin domain XM56_09915 IPR036249 Thioredoxin-like superfamily XM56_09915 IPR013740 Redoxin XM56_09920 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site XM56_09920 IPR029065 Enolase C-terminal domain-like XM56_09920 IPR029017 Enolase-like, N-terminal XM56_09920 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal XM56_09920 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain XM56_09920 IPR036849 Enolase-like, C-terminal domain superfamily XM56_09920 IPR034603 Dipeptide epimerase XM56_09925 IPR000834 Peptidase M14, carboxypeptidase A XM56_09930 IPR030678 Peptide/nickel binding protein, MppA-type XM56_09930 IPR039424 Solute-binding protein family 5 XM56_09930 IPR000914 Solute-binding protein family 5 domain XM56_09930 IPR023765 Solute-binding protein family 5, conserved site XM56_09935 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB XM56_09935 IPR023714 Zinc transport protein ZntB XM56_09940 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XM56_09940 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase XM56_09940 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal XM56_09940 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type XM56_09945 IPR000909 Phosphatidylinositol-specific phospholipase C, X domain XM56_09945 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily XM56_09950 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II XM56_09950 IPR037112 Pyruvate-flavodoxin oxidoreductase, EKR domain superfamily XM56_09950 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain XM56_09950 IPR011895 Pyruvate-flavodoxin oxidoreductase XM56_09950 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain XM56_09950 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II XM56_09950 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding XM56_09950 IPR029061 Thiamin diphosphate-binding fold XM56_09950 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site XM56_09950 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal XM56_09950 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain XM56_09950 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain XM56_09955 IPR000390 Small multidrug resistance protein family XM56_09960 IPR003416 MgtC/SapB/SrpB/YhiD family XM56_09965 IPR005590 Protein of unknown function DUF333 XM56_09970 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 XM56_09970 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain XM56_09970 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain XM56_09970 IPR036291 NAD(P)-binding domain superfamily XM56_09970 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site XM56_09975 IPR021730 Dicarboxylate transport XM56_09980 IPR025985 YnbE-like lipoprotein XM56_09985 IPR008309 Uncharacterised conserved protein UCP025560 XM56_09990 IPR029039 Flavoprotein-like superfamily XM56_09990 IPR023048 NADH-azoreductase, FMN-dependent XM56_09990 IPR003680 Flavodoxin-like fold XM56_09995 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_09995 IPR010222 RNA helicase HrpA XM56_09995 IPR007502 Helicase-associated domain XM56_09995 IPR024590 RNA helicase HrpA, C-terminal XM56_09995 IPR001650 Helicase, C-terminal XM56_09995 IPR011709 Domain of unknown function DUF1605 XM56_09995 IPR011545 DEAD/DEAH box helicase domain XM56_09995 IPR003593 AAA+ ATPase domain XM56_09995 IPR014001 Helicase superfamily 1/2, ATP-binding domain XM56_10010 IPR009003 Peptidase S1, PA clan XM56_10010 IPR033116 Serine proteases, trypsin family, serine active site XM56_10010 IPR001254 Serine proteases, trypsin domain XM56_10010 IPR018114 Serine proteases, trypsin family, histidine active site XM56_10010 IPR008256 Peptidase S1B XM56_10020 IPR001333 Peptidase M32, carboxypeptidase Taq XM56_10025 IPR005467 Histidine kinase domain XM56_10025 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XM56_10025 IPR004358 Signal transduction histidine kinase-related protein, C-terminal XM56_10025 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain XM56_10025 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily XM56_10025 IPR003660 HAMP domain XM56_10025 IPR003594 Histidine kinase/HSP90-like ATPase XM56_10030 IPR039420 Transcriptional regulatory protein WalR-like XM56_10030 IPR001789 Signal transduction response regulator, receiver domain XM56_10030 IPR011006 CheY-like superfamily XM56_10030 IPR001867 OmpR/PhoB-type DNA-binding domain XM56_10030 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_10030 IPR016032 Signal transduction response regulator, C-terminal effector XM56_10040 IPR002293 Amino acid/polyamine transporter I XM56_10040 IPR004754 Amino acid antiporter XM56_10045 IPR025543 Dodecin-like XM56_10045 IPR010854 Domain of unknown function DUF1471 XM56_10045 IPR036275 YdgH-like superfamily XM56_10045 IPR025539 YdgH protein XM56_10055 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain XM56_10055 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 XM56_10055 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 XM56_10055 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal XM56_10055 IPR036291 NAD(P)-binding domain superfamily XM56_10055 IPR026255 NAD(P) transhydrogenase, alpha subunit XM56_10055 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal XM56_10060 IPR029035 DHS-like NAD/FAD-binding domain superfamily XM56_10060 IPR034300 NADP transhydrogenase beta-like domain XM56_10060 IPR012136 NADP transhydrogenase, beta subunit XM56_10065 IPR006016 UspA XM56_10070 IPR036390 Winged helix DNA-binding domain superfamily XM56_10070 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_10070 IPR018335 Transcription regulator HTH, Crp-type, conserved site XM56_10070 IPR012318 Crp-type HTH domain XM56_10070 IPR000595 Cyclic nucleotide-binding domain XM56_10070 IPR018490 Cyclic nucleotide-binding-like XM56_10070 IPR014710 RmlC-like jelly roll fold XM56_10075 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding XM56_10075 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain XM56_10075 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_10075 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site XM56_10075 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily XM56_10075 IPR023546 Methylated-DNA--protein-cysteine methyltransferase XM56_10075 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain XM56_10090 IPR010499 Bacterial transcription activator, effector binding XM56_10090 IPR024911 DNA gyrase inhibitor GyrI XM56_10090 IPR029442 GyrI-like small molecule binding domain XM56_10090 IPR011256 Regulatory factor, effector binding domain superfamily XM56_10095 IPR020904 Short-chain dehydrogenase/reductase, conserved site XM56_10095 IPR036291 NAD(P)-binding domain superfamily XM56_10095 IPR002347 Short-chain dehydrogenase/reductase SDR XM56_10100 IPR017850 Alkaline-phosphatase-like, core domain superfamily XM56_10100 IPR018299 Alkaline phosphatase, active site XM56_10100 IPR001952 Alkaline phosphatase XM56_10105 IPR029056 Ribokinase-like XM56_10105 IPR002139 Ribokinase/fructokinase XM56_10105 IPR011611 Carbohydrate kinase PfkB XM56_10105 IPR011877 Ribokinase XM56_10105 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site XM56_10125 IPR006439 HAD hydrolase, subfamily IA XM56_10125 IPR023214 HAD superfamily XM56_10125 IPR041492 Haloacid dehalogenase-like hydrolase XM56_10125 IPR023198 Phosphoglycolate phosphatase-like, domain 2 XM56_10125 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB XM56_10125 IPR036412 HAD-like superfamily XM56_10130 IPR004789 Acetolactate synthase, small subunit XM56_10130 IPR039557 AHAS, ACT domain XM56_10130 IPR002912 ACT domain XM56_10135 IPR000399 TPP-binding enzyme, conserved site XM56_10135 IPR012846 Acetolactate synthase, large subunit, biosynthetic XM56_10135 IPR039368 Acetolactate synthase large subunit, TPP binding domain XM56_10135 IPR029035 DHS-like NAD/FAD-binding domain superfamily XM56_10135 IPR029061 Thiamin diphosphate-binding fold XM56_10135 IPR012000 Thiamine pyrophosphate enzyme, central domain XM56_10135 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding XM56_10135 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain XM56_10145 IPR002502 N-acetylmuramoyl-L-alanine amidase domain XM56_10145 IPR036366 PGBD superfamily XM56_10145 IPR036365 PGBD-like superfamily XM56_10145 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily XM56_10175 IPR021159 Glycerate/sugar phosphate transporter, conserved site XM56_10175 IPR000849 Sugar phosphate transporter XM56_10175 IPR036259 MFS transporter superfamily XM56_10175 IPR011701 Major facilitator superfamily XM56_10175 IPR020846 Major facilitator superfamily domain XM56_10180 IPR022337 Inositol monophosphatase, SuhB XM56_10180 IPR000760 Inositol monophosphatase-like XM56_10180 IPR020583 Inositol monophosphatase, metal-binding site XM56_10180 IPR033942 Inositol monophosphatase XM56_10180 IPR020550 Inositol monophosphatase, conserved site XM56_10185 IPR028082 Periplasmic binding protein-like I XM56_10185 IPR000843 LacI-type HTH domain XM56_10185 IPR010982 Lambda repressor-like, DNA-binding domain superfamily XM56_10190 IPR011271 AMP nucleosidase XM56_10190 IPR000845 Nucleoside phosphorylase domain XM56_10190 IPR037109 AMP nucleoside phosphorylase, N-terminal domain superfamily XM56_10190 IPR018953 AMP nucleoside phosphorylase, N-terminal XM56_10190 IPR035994 Nucleoside phosphorylase superfamily XM56_10195 IPR025296 Domain of unknown function DUF4158 XM56_10195 IPR002513 Tn3 transposase DDE domain XM56_10200 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily XM56_10200 IPR006120 Resolvase, HTH domain XM56_10200 IPR006118 Recombinase, conserved site XM56_10200 IPR006119 Resolvase, N-terminal catalytic domain XM56_10215 IPR000847 Transcription regulator HTH, LysR XM56_10215 IPR005119 LysR, substrate-binding XM56_10215 IPR036390 Winged helix DNA-binding domain superfamily XM56_10215 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_10225 IPR033199 Dimethylarginine dimethylaminohydrolase XM56_10230 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter XM56_10230 IPR018313 Solute-binding protein family 3, conserved site XM56_10230 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF XM56_10235 IPR035906 MetI-like superfamily XM56_10235 IPR000515 ABC transporter type 1, transmembrane domain MetI-like XM56_10235 IPR030199 Histidine transport system permease protein HisQ XM56_10235 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain XM56_10240 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain XM56_10240 IPR035906 MetI-like superfamily XM56_10240 IPR000515 ABC transporter type 1, transmembrane domain MetI-like XM56_10245 IPR011991 ArsR-like helix-turn-helix domain XM56_10245 IPR019888 Transcription regulator AsnC-type XM56_10245 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_10245 IPR036390 Winged helix DNA-binding domain superfamily XM56_10245 IPR000485 AsnC-type HTH domain XM56_10245 IPR011008 Dimeric alpha-beta barrel XM56_10245 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain XM56_10275 IPR036282 Glutathione S-transferase, C-terminal domain superfamily XM56_10275 IPR010987 Glutathione S-transferase, C-terminal-like XM56_10275 IPR040079 Glutathione Transferase family XM56_10275 IPR036249 Thioredoxin-like superfamily XM56_10275 IPR004045 Glutathione S-transferase, N-terminal XM56_10310 IPR013356 Type II secretion system GspD XM56_10310 IPR001775 GspD/PilQ family XM56_10310 IPR005644 NolW-like XM56_10310 IPR038591 NolW-like superfamily XM56_10310 IPR004846 Type II/III secretion system XM56_10310 IPR004846 Type II/III secretion system XM56_10310 IPR038591 NolW-like superfamily XM56_10310 IPR005644 NolW-like XM56_10310 IPR001775 GspD/PilQ family XM56_10310 IPR004845 Type II secretion system GspD, conserved site XM56_10310 IPR004845 Type II secretion system GspD, conserved site XM56_10310 IPR013356 Type II secretion system GspD XM56_10370 IPR025543 Dodecin-like XM56_10370 IPR036275 YdgH-like superfamily XM56_10370 IPR010854 Domain of unknown function DUF1471 XM56_10380 IPR002347 Short-chain dehydrogenase/reductase SDR XM56_10380 IPR036291 NAD(P)-binding domain superfamily XM56_10380 IPR020904 Short-chain dehydrogenase/reductase, conserved site XM56_10385 IPR003844 Uncharacterised protein family UPF0060 XM56_10395 IPR009700 Protein of unknown function DUF1283 XM56_10400 IPR010595 Protein of unknown function DUF1161 XM56_10410 IPR023790 Chloride channel, voltage-gated, ClcB XM56_10410 IPR001807 Chloride channel, voltage gated XM56_10410 IPR014743 Chloride channel, core XM56_10415 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_10415 IPR004472 Dethiobiotin synthase BioD XM56_10420 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_10420 IPR000600 ROK family XM56_10420 IPR036390 Winged helix DNA-binding domain superfamily XM56_10425 IPR036390 Winged helix DNA-binding domain superfamily XM56_10425 IPR000847 Transcription regulator HTH, LysR XM56_10425 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_10425 IPR005119 LysR, substrate-binding XM56_10430 IPR005829 Sugar transporter, conserved site XM56_10430 IPR020846 Major facilitator superfamily domain XM56_10430 IPR011701 Major facilitator superfamily XM56_10430 IPR036259 MFS transporter superfamily XM56_10440 IPR023650 Beta-lactamase, class-A active site XM56_10440 IPR000871 Beta-lactamase, class-A XM56_10440 IPR012338 Beta-lactamase/transpeptidase-like XM56_10445 IPR002103 Bacterial luciferase/NFP XM56_10445 IPR036661 Luciferase-like domain superfamily XM56_10445 IPR011251 Luciferase-like domain XM56_10445 IPR018235 Bacterial luciferase, conserved site XM56_10445 IPR033924 Alkanal monooxygenase XM56_10450 IPR002103 Bacterial luciferase/NFP XM56_10450 IPR036661 Luciferase-like domain superfamily XM56_10450 IPR011251 Luciferase-like domain XM56_10450 IPR018235 Bacterial luciferase, conserved site XM56_10450 IPR033924 Alkanal monooxygenase XM56_10460 IPR008865 DNA replication terminus site-binding protein XM56_10460 IPR036384 Replication terminator Tus superfamily XM56_10460 IPR036381 Replication terminator Tus, domain 1 XM56_10470 IPR008948 L-Aspartase-like XM56_10470 IPR022761 Fumarate lyase, N-terminal XM56_10470 IPR024083 Fumarase/histidase, N-terminal XM56_10470 IPR020557 Fumarate lyase, conserved site XM56_10470 IPR018951 Fumarase C, C-terminal XM56_10470 IPR005677 Fumarate hydratase, class II XM56_10470 IPR000362 Fumarate lyase family XM56_10475 IPR016305 Mannose-6-phosphate isomerase XM56_10475 IPR001250 Mannose-6-phosphate isomerase, type I XM56_10475 IPR011051 RmlC-like cupin domain superfamily XM56_10475 IPR014710 RmlC-like jelly roll fold XM56_10475 IPR018050 Phosphomannose isomerase, type I, conserved site XM56_10480 IPR010352 Protein of unknown function DUF945 XM56_10485 IPR018357 Hexapeptide transferase, conserved site XM56_10485 IPR011004 Trimeric LpxA-like superfamily XM56_10485 IPR001451 Hexapeptide repeat XM56_10490 IPR000843 LacI-type HTH domain XM56_10490 IPR010982 Lambda repressor-like, DNA-binding domain superfamily XM56_10490 IPR001761 Periplasmic binding protein/LacI sugar binding domain XM56_10490 IPR028082 Periplasmic binding protein-like I XM56_10495 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site XM56_10495 IPR036878 Glucose permease domain IIB XM56_10495 IPR013013 Phosphotransferase system, EIIC component, type 1 XM56_10495 IPR003352 Phosphotransferase system, EIIC XM56_10495 IPR001996 Phosphotransferase system, IIB component, type 1 XM56_10495 IPR011301 PTS system, maltose/glucose-specific IIBC component XM56_10495 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component XM56_10500 IPR015421 Pyridoxal phosphate-dependent transferase, major domain XM56_10500 IPR004839 Aminotransferase, class I/classII XM56_10500 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 XM56_10500 IPR027619 Putative C-S lyase XM56_10500 IPR015424 Pyridoxal phosphate-dependent transferase XM56_10505 IPR032466 Metal-dependent hydrolase XM56_10505 IPR006330 Adenosine/adenine deaminase XM56_10505 IPR028893 Adenosine deaminase XM56_10505 IPR001365 Adenosine/AMP deaminase domain XM56_10505 IPR006650 Adenosine/AMP deaminase active site XM56_10510 IPR016833 Putative sodium bile acid cotransporter XM56_10510 IPR038770 Sodium/solute symporter superfamily XM56_10515 IPR000683 Oxidoreductase, N-terminal XM56_10515 IPR036291 NAD(P)-binding domain superfamily XM56_10515 IPR004104 Oxidoreductase, C-terminal XM56_10520 IPR018062 HTH domain AraC-type, conserved site XM56_10520 IPR018060 DNA binding HTH domain, AraC-type XM56_10520 IPR037923 Transcription regulator HTH-like XM56_10520 IPR003313 AraC-type arabinose-binding/dimerisation domain XM56_10520 IPR020449 Transcription regulator HTH, AraC- type XM56_10520 IPR009057 Homeobox-like domain superfamily XM56_10525 IPR001851 ABC transporter, permease XM56_10530 IPR017917 ABC transporter, arabinose import, ATP-binding protein, AraG XM56_10530 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_10530 IPR017871 ABC transporter, conserved site XM56_10530 IPR003439 ABC transporter-like XM56_10530 IPR003593 AAA+ ATPase domain XM56_10535 IPR001761 Periplasmic binding protein/LacI sugar binding domain XM56_10535 IPR026266 L-arabinose-binding periplasmic protein XM56_10535 IPR028082 Periplasmic binding protein-like I XM56_10540 IPR005929 Ribulokinase XM56_10540 IPR018485 Carbohydrate kinase, FGGY, C-terminal XM56_10545 IPR024664 L-arabinose isomerase, C-terminal XM56_10545 IPR038583 L-arabinose isomerase, N-terminal domain superfamily XM56_10545 IPR004216 L-fucose/L-arabinose isomerase, C-terminal XM56_10545 IPR009015 L-fucose isomerase, N-terminal/central domain superfamily XM56_10545 IPR003762 L-arabinose isomerase XM56_10550 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_10550 IPR003395 RecF/RecN/SMC, N-terminal XM56_10550 IPR042174 DNA-binding RecF, domain 2 XM56_10550 IPR001238 DNA-binding, RecF XM56_10550 IPR018078 DNA-binding, RecF, conserved site XM56_10555 IPR039395 Peptidase C39-like A XM56_10555 IPR039421 Type I protein exporter XM56_10555 IPR003593 AAA+ ATPase domain XM56_10555 IPR011527 ABC transporter type 1, transmembrane domain XM56_10555 IPR036640 ABC transporter type 1, transmembrane domain superfamily XM56_10555 IPR010132 ATPase, type I secretion system, HlyB XM56_10555 IPR003439 ABC transporter-like XM56_10555 IPR017871 ABC transporter, conserved site XM56_10555 IPR005074 Peptidase C39, bacteriocin processing XM56_10555 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_10560 IPR006144 Secretion protein HlyD, conserved site XM56_10560 IPR010129 Type I secretion membrane fusion protein, HlyD family XM56_10570 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_10570 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site XM56_10570 IPR000559 Formate-tetrahydrofolate ligase, FTHFS XM56_10575 IPR019690 Protein of unknown function DUF2569 XM56_10580 IPR003667 NqrDE/RnfAE XM56_10580 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA XM56_10585 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain XM56_10585 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site XM56_10585 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria XM56_10585 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB XM56_10585 IPR011005 Dihydropteroate synthase-like XM56_10585 IPR007202 4Fe-4S domain XM56_10590 IPR026902 RnfC Barrel sandwich hybrid domain XM56_10590 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain XM56_10590 IPR019554 Soluble ligand binding domain XM56_10590 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily XM56_10590 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site XM56_10590 IPR009051 Alpha-helical ferredoxin XM56_10590 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain XM56_10590 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC XM56_10600 IPR020449 Transcription regulator HTH, AraC- type XM56_10600 IPR029442 GyrI-like small molecule binding domain XM56_10600 IPR010499 Bacterial transcription activator, effector binding XM56_10600 IPR011256 Regulatory factor, effector binding domain superfamily XM56_10600 IPR018062 HTH domain AraC-type, conserved site XM56_10600 IPR018060 DNA binding HTH domain, AraC-type XM56_10600 IPR009057 Homeobox-like domain superfamily XM56_10605 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D XM56_10605 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD XM56_10610 IPR007329 FMN-binding XM56_10610 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG XM56_10615 IPR003667 NqrDE/RnfAE XM56_10615 IPR010968 Ion-translocating oxidoreductase complex subunit E XM56_10620 IPR011257 DNA glycosylase XM56_10620 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal XM56_10620 IPR000445 Helix-hairpin-helix motif XM56_10620 IPR003265 HhH-GPD domain XM56_10620 IPR004035 Endonuclease III, iron-sulphur binding site XM56_10620 IPR005759 Endonuclease III XM56_10620 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif XM56_10620 IPR004036 Endonuclease III-like, conserved site-2 XM56_10640 IPR009010 Aspartate decarboxylase-like domain superfamily XM56_10640 IPR041953 YdeP, molybdopterin-binding oxidoreductase-like domain XM56_10640 IPR010046 Oxidoreductase alpha (molybdopterin) subunit XM56_10640 IPR006656 Molybdopterin oxidoreductase XM56_10640 IPR037951 YdeP-like, MopB domain XM56_10645 IPR003029 S1 domain XM56_10645 IPR001900 Ribonuclease II/R XM56_10645 IPR013223 Ribonuclease B, N-terminal OB domain XM56_10645 IPR022966 Ribonuclease II/R, conserved site XM56_10645 IPR011804 Ribonuclease II XM56_10645 IPR004476 Ribonuclease II/ribonuclease R XM56_10645 IPR011129 Cold shock domain XM56_10645 IPR012340 Nucleic acid-binding, OB-fold XM56_10650 IPR025299 CstA, C-terminal domain XM56_10650 IPR003706 CstA, N-terminal domain XM56_10655 IPR007423 Selenoprotein, putative XM56_10660 IPR023001 Fructose-6-phosphate aldolase XM56_10660 IPR013785 Aldolase-type TIM barrel XM56_10660 IPR001585 Transaldolase/Fructose-6-phosphate aldolase XM56_10660 IPR018225 Transaldolase, active site XM56_10660 IPR033919 Transaldolase/Fructose-6-phosphate aldolase, archaeal/bacterial XM56_10660 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase XM56_10665 IPR001034 DeoR-type HTH domain XM56_10665 IPR036390 Winged helix DNA-binding domain superfamily XM56_10665 IPR037171 NagB/RpiA transferase-like XM56_10665 IPR014036 DeoR C-terminal sensor domain XM56_10665 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_10665 IPR018356 Transcription regulator, HTH DeoR-type, conserved site XM56_10675 IPR004661 L-ribulose-5-phosphate 4-epimerase XM56_10675 IPR033748 L-ribulose-5-phosphate 4-epimerase AraD XM56_10675 IPR036409 Class II aldolase/adducin N-terminal domain superfamily XM56_10675 IPR001303 Class II aldolase/adducin N-terminal XM56_10680 IPR008816 Glycine zipper 2TM domain XM56_10690 IPR005872 Archaeal/bacterial translation initiation factor SUI1 XM56_10690 IPR001950 SUI1 domain XM56_10690 IPR036877 SUI1 domain superfamily XM56_10695 IPR018089 Orotidine 5'-phosphate decarboxylase, active site XM56_10695 IPR011060 Ribulose-phosphate binding barrel XM56_10695 IPR014732 Orotidine 5'-phosphate decarboxylase XM56_10695 IPR013785 Aldolase-type TIM barrel XM56_10695 IPR001754 Orotidine 5'-phosphate decarboxylase domain XM56_10700 IPR025543 Dodecin-like XM56_10700 IPR010854 Domain of unknown function DUF1471 XM56_10700 IPR036275 YdgH-like superfamily XM56_10705 IPR004711 Benzoate transporter XM56_10710 IPR014710 RmlC-like jelly roll fold XM56_10710 IPR001387 Cro/C1-type helix-turn-helix domain XM56_10710 IPR013096 Cupin 2, conserved barrel XM56_10710 IPR010982 Lambda repressor-like, DNA-binding domain superfamily XM56_10710 IPR011051 RmlC-like cupin domain superfamily XM56_10720 IPR030865 Lipopolysaccharide assembly protein B XM56_10720 IPR041166 LapB, rubredoxin metal binding domain XM56_10720 IPR013026 Tetratricopeptide repeat-containing domain XM56_10720 IPR019734 Tetratricopeptide repeat XM56_10720 IPR011990 Tetratricopeptide-like helical domain superfamily XM56_10725 IPR010445 Lipopolysaccharide assembly protein A domain XM56_10725 IPR032906 Lipopolysaccharide assembly protein A XM56_10730 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily XM56_10730 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase XM56_10735 IPR000926 GTP cyclohydrolase II, RibA XM56_10735 IPR036144 RibA-like superfamily XM56_10735 IPR032677 GTP cyclohydrolase II XM56_10745 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain XM56_10745 IPR006249 Aconitase/Iron-responsive element-binding protein 2 XM56_10745 IPR018136 Aconitase family, 4Fe-4S cluster binding site XM56_10745 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 XM56_10745 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel XM56_10745 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain XM56_10745 IPR036008 Aconitase, iron-sulfur domain XM56_10755 IPR036390 Winged helix DNA-binding domain superfamily XM56_10755 IPR005119 LysR, substrate-binding XM56_10755 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_10755 IPR000847 Transcription regulator HTH, LysR XM56_10760 IPR013498 DNA topoisomerase, type IA, zn finger XM56_10760 IPR000380 DNA topoisomerase, type IA XM56_10760 IPR003601 DNA topoisomerase, type IA, domain 2 XM56_10760 IPR023406 DNA topoisomerase, type IA, active site XM56_10760 IPR013497 DNA topoisomerase, type IA, central XM56_10760 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 XM56_10760 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 XM56_10760 IPR003602 DNA topoisomerase, type IA, DNA-binding domain XM56_10760 IPR023405 DNA topoisomerase, type IA, core domain XM56_10760 IPR034149 DNA topoisomerase 1, TOPRIM domain XM56_10760 IPR028612 DNA topoisomerase I, type IA XM56_10760 IPR006171 TOPRIM domain XM56_10760 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type XM56_10760 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 XM56_10760 IPR005733 DNA topoisomerase I, bacterial-type XM56_10765 IPR019633 Protein of unknown function DUF2498 XM56_10765 IPR038191 YciN superfamily XM56_10770 IPR013703 Peptidase S49, N-terminal proteobacteria XM56_10770 IPR002142 Peptidase S49 XM56_10770 IPR029045 ClpP/crotonase-like domain superfamily XM56_10775 IPR002347 Short-chain dehydrogenase/reductase SDR XM56_10775 IPR020904 Short-chain dehydrogenase/reductase, conserved site XM56_10775 IPR036291 NAD(P)-binding domain superfamily XM56_10780 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_10780 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR XM56_10780 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain XM56_10790 IPR036986 RNA-binding S4 domain superfamily XM56_10790 IPR020103 Pseudouridine synthase, catalytic domain superfamily XM56_10790 IPR006145 Pseudouridine synthase, RsuA/RluA XM56_10790 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F XM56_10790 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site XM56_10790 IPR002942 RNA-binding S4 domain XM56_10795 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily XM56_10795 IPR006070 YrdC-like domain XM56_10800 IPR016195 Polymerase/histidinol phosphatase-like XM56_10800 IPR003141 Polymerase/histidinol phosphatase, N-terminal XM56_10800 IPR004013 PHP domain XM56_10805 IPR015890 Chorismate-utilising enzyme, C-terminal XM56_10805 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial XM56_10805 IPR005801 ADC synthase XM56_10805 IPR019999 Anthranilate synthase component I-like XM56_10805 IPR006805 Anthranilate synthase component I, N-terminal XM56_10810 IPR017926 Glutamine amidotransferase XM56_10810 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain XM56_10810 IPR029062 Class I glutamine amidotransferase-like XM56_10815 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily XM56_10815 IPR000312 Glycosyl transferase, family 3 XM56_10815 IPR017459 Glycosyl transferase family 3, N-terminal domain XM56_10815 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily XM56_10815 IPR005940 Anthranilate phosphoribosyl transferase XM56_10820 IPR001468 Indole-3-glycerol phosphate synthase, conserved site XM56_10820 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) XM56_10820 IPR013785 Aldolase-type TIM barrel XM56_10820 IPR013798 Indole-3-glycerol phosphate synthase XM56_10820 IPR011060 Ribulose-phosphate binding barrel XM56_10825 IPR023026 Tryptophan synthase beta chain/beta chain-like XM56_10825 IPR001926 Pyridoxal-phosphate dependent enzyme XM56_10825 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme XM56_10825 IPR006654 Tryptophan synthase, beta chain XM56_10825 IPR006653 Tryptophan synthase, beta chain, conserved site XM56_10830 IPR002028 Tryptophan synthase, alpha chain XM56_10830 IPR018204 Tryptophan synthase, alpha chain, active site XM56_10830 IPR011060 Ribulose-phosphate binding barrel XM56_10830 IPR013785 Aldolase-type TIM barrel XM56_10840 IPR005618 Outer membrane protein, OmpW XM56_10840 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel XM56_10845 IPR005358 Putative zinc- or iron-chelating domain containing protein XM56_10850 IPR009627 Uncharacterised protein family UPF0259 XM56_10860 IPR006008 Intracellular septation protein A XM56_10865 IPR006683 Thioesterase domain XM56_10865 IPR029069 HotDog domain superfamily XM56_10865 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase XM56_10865 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain XM56_10870 IPR006260 TonB/TolA, C-terminal XM56_10870 IPR037682 TonB, C-terminal XM56_10870 IPR003538 Gram-negative bacterial TonB protein XM56_10875 IPR005545 YCII-related XM56_10875 IPR011008 Dimeric alpha-beta barrel XM56_10890 IPR001736 Phospholipase D/Transphosphatidylase XM56_10890 IPR027379 Cardiolipin synthase N-terminal XM56_10890 IPR025202 Phospholipase D-like domain XM56_10890 IPR022924 Cardiolipin synthase XM56_10890 IPR030840 Cardiolipin synthase A XM56_10895 IPR036763 Putative dsDNA mimic superfamily XM56_10895 IPR007376 dsDNA mimic, putative XM56_10900 IPR003593 AAA+ ATPase domain XM56_10900 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal XM56_10900 IPR003439 ABC transporter-like XM56_10900 IPR017871 ABC transporter, conserved site XM56_10900 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_10905 IPR003593 AAA+ ATPase domain XM56_10905 IPR003439 ABC transporter-like XM56_10905 IPR017871 ABC transporter, conserved site XM56_10905 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_10905 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal XM56_10910 IPR000515 ABC transporter type 1, transmembrane domain MetI-like XM56_10910 IPR025966 Oligopeptide transport permease C-like, N-terminal domain XM56_10910 IPR035906 MetI-like superfamily XM56_10915 IPR000515 ABC transporter type 1, transmembrane domain MetI-like XM56_10915 IPR035906 MetI-like superfamily XM56_10920 IPR039424 Solute-binding protein family 5 XM56_10920 IPR023765 Solute-binding protein family 5, conserved site XM56_10920 IPR000914 Solute-binding protein family 5 domain XM56_10920 IPR030678 Peptide/nickel binding protein, MppA-type XM56_10925 IPR023765 Solute-binding protein family 5, conserved site XM56_10925 IPR030678 Peptide/nickel binding protein, MppA-type XM56_10925 IPR039424 Solute-binding protein family 5 XM56_10925 IPR000914 Solute-binding protein family 5 domain XM56_10930 IPR002771 Multiple antibiotic resistance (MarC)-related XM56_10935 IPR016161 Aldehyde/histidinol dehydrogenase XM56_10935 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase XM56_10935 IPR034789 Bifunctional aldehyde-alcohol dehydrogenase, C-terminal domain XM56_10935 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA XM56_10935 IPR018211 Alcohol dehydrogenase, iron-type, conserved site XM56_10935 IPR039697 Iron-type alcohol dehydrogenase-like XM56_10935 IPR016162 Aldehyde dehydrogenase, N-terminal XM56_10935 IPR016163 Aldehyde dehydrogenase, C-terminal XM56_10935 IPR015590 Aldehyde dehydrogenase domain XM56_10940 IPR001267 Thymidine kinase XM56_10940 IPR020633 Thymidine kinase, conserved site XM56_10940 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_10950 IPR027444 Histone-like protein H-NS, C-terminal domain XM56_10950 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily XM56_10950 IPR001801 Histone-like protein H-NS XM56_10950 IPR027454 Histone-like protein H-NS, N-terminal XM56_10955 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal XM56_10955 IPR017476 UDP-glucose/GDP-mannose dehydrogenase XM56_10955 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal XM56_10955 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily XM56_10955 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily XM56_10955 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type XM56_10955 IPR036291 NAD(P)-binding domain superfamily XM56_10955 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation XM56_10960 IPR011006 CheY-like superfamily XM56_10960 IPR028616 Regulator of RpoS XM56_10960 IPR001789 Signal transduction response regulator, receiver domain XM56_10960 IPR039420 Transcriptional regulatory protein WalR-like XM56_10960 IPR036457 PPM-type phosphatase domain superfamily XM56_10965 IPR002641 Patatin-like phospholipase domain XM56_10965 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase XM56_10965 IPR001423 Lysophospholipase patatin, conserved site XM56_10975 IPR032710 NTF2-like domain superfamily XM56_10975 IPR004027 SEC-C motif XM56_10975 IPR023006 Uncharacterised protein family UPF0225 XM56_10980 IPR002912 ACT domain XM56_10980 IPR002376 Formyl transferase, N-terminal XM56_10980 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain XM56_10980 IPR036477 Formyl transferase, N-terminal domain superfamily XM56_10980 IPR004810 Formyltetrahydrofolate deformylase XM56_10990 IPR005119 LysR, substrate-binding XM56_10990 IPR000847 Transcription regulator HTH, LysR XM56_10990 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_10990 IPR036390 Winged helix DNA-binding domain superfamily XM56_10995 IPR036691 Endonuclease/exonuclease/phosphatase superfamily XM56_10995 IPR005135 Endonuclease/exonuclease/phosphatase XM56_10995 IPR020848 AP endonuclease 1, conserved site XM56_10995 IPR020847 AP endonuclease 1, binding site XM56_10995 IPR037493 Exodeoxyribonuclease III-like XM56_10995 IPR004808 AP endonuclease 1 XM56_11000 IPR000086 NUDIX hydrolase domain XM56_11000 IPR020084 NUDIX hydrolase, conserved site XM56_11000 IPR015797 NUDIX hydrolase-like domain superfamily XM56_11000 IPR020476 NUDIX hydrolase XM56_11005 IPR009971 Protein of unknown function DUF1496 XM56_11010 IPR006171 TOPRIM domain XM56_11010 IPR005738 DNA topoisomerase III XM56_11010 IPR003602 DNA topoisomerase, type IA, DNA-binding domain XM56_11010 IPR023405 DNA topoisomerase, type IA, core domain XM56_11010 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 XM56_11010 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 XM56_11010 IPR034144 DNA topoisomerase 3-like, TOPRIM domain XM56_11010 IPR013497 DNA topoisomerase, type IA, central XM56_11010 IPR000380 DNA topoisomerase, type IA XM56_11010 IPR003601 DNA topoisomerase, type IA, domain 2 XM56_11010 IPR023406 DNA topoisomerase, type IA, active site XM56_11010 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 XM56_11015 IPR016188 PurM-like, N-terminal domain XM56_11015 IPR010918 PurM-like, C-terminal domain XM56_11015 IPR004536 Selenophosphate synthetase XM56_11015 IPR036921 PurM-like, N-terminal domain superfamily XM56_11015 IPR036676 PurM-like, C-terminal domain superfamily XM56_11015 IPR023061 Selenophosphate synthetase, class I XM56_11020 IPR029479 Nitroreductase XM56_11020 IPR026021 Putative NAD(P)H nitroreductase YdjA-like XM56_11020 IPR000415 Nitroreductase-like XM56_11025 IPR002142 Peptidase S49 XM56_11025 IPR004634 Peptidase S49, protease IV XM56_11025 IPR004635 Peptidase S49, SppA XM56_11025 IPR033854 Signal peptide peptidase A XM56_11025 IPR029045 ClpP/crotonase-like domain superfamily XM56_11030 IPR006033 Type I L-asparaginase family XM56_11030 IPR041725 Type I (cytosolic) L-asparaginase XM56_11030 IPR027473 L-asparaginase, C-terminal XM56_11030 IPR040919 Asparaginase/glutaminase, C-terminal XM56_11030 IPR027475 Asparaginase/glutaminase, active site 2 XM56_11030 IPR020827 Asparaginase/glutaminase, active site 1 XM56_11030 IPR006034 Asparaginase/glutaminase-like XM56_11030 IPR036152 Asparaginase/glutaminase-like superfamily XM56_11030 IPR027474 L-asparaginase, N-terminal XM56_11030 IPR037152 L-asparaginase, N-terminal domain superfamily XM56_11035 IPR000868 Isochorismatase-like XM56_11035 IPR036380 Isochorismatase-like superfamily XM56_11045 IPR009749 Protein of unknown function DUF1315 XM56_11050 IPR011057 Mss4-like superfamily XM56_11050 IPR002579 Peptide methionine sulphoxide reductase MrsB XM56_11050 IPR028427 Peptide methionine sulfoxide reductase XM56_11055 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family XM56_11055 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site XM56_11055 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain XM56_11055 IPR036291 NAD(P)-binding domain superfamily XM56_11055 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain XM56_11055 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I XM56_11060 IPR014718 Glycoside hydrolase-type carbohydrate-binding XM56_11060 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase XM56_11060 IPR025532 Glucose-6-phosphate 1-epimerase XM56_11060 IPR011013 Galactose mutarotase-like domain superfamily XM56_11065 IPR010583 MltA-interacting MipA XM56_11070 IPR013153 PrkA AAA domain XM56_11070 IPR010650 PrkA C-terminal domain XM56_11070 IPR016230 Serine-protein kinase, PrkA XM56_11070 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_11075 IPR006698 Uncharacterised protein family UPF0229 XM56_11090 IPR000847 Transcription regulator HTH, LysR XM56_11090 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_11090 IPR036390 Winged helix DNA-binding domain superfamily XM56_11090 IPR005119 LysR, substrate-binding XM56_11095 IPR014710 RmlC-like jelly roll fold XM56_11095 IPR011051 RmlC-like cupin domain superfamily XM56_11095 IPR008778 Pirin, C-terminal domain XM56_11095 IPR012093 Pirin XM56_11095 IPR003829 Pirin, N-terminal domain XM56_11100 IPR001633 EAL domain XM56_11100 IPR000160 GGDEF domain XM56_11100 IPR000014 PAS domain XM56_11100 IPR000700 PAS-associated, C-terminal XM56_11100 IPR035965 PAS domain superfamily XM56_11100 IPR012226 Diguanylate cyclase/phosphodiesterase XM56_11100 IPR001610 PAC motif XM56_11100 IPR035919 EAL domain superfamily XM56_11100 IPR029787 Nucleotide cyclase XM56_11105 IPR020846 Major facilitator superfamily domain XM56_11105 IPR005829 Sugar transporter, conserved site XM56_11105 IPR023697 Multidrug resistance protein MdtL XM56_11105 IPR011701 Major facilitator superfamily XM56_11105 IPR036259 MFS transporter superfamily XM56_11110 IPR029066 PLP-binding barrel XM56_11110 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site XM56_11110 IPR001608 Alanine racemase, N-terminal XM56_11110 IPR011079 Alanine racemase, C-terminal XM56_11110 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal XM56_11110 IPR000821 Alanine racemase XM56_11115 IPR036188 FAD/NAD(P)-binding domain superfamily XM56_11115 IPR023080 D-amino acid dehydrogenase DadA XM56_11115 IPR006076 FAD dependent oxidoreductase XM56_11120 IPR007390 Sporulation stage V, protein R XM56_11125 IPR000524 Transcription regulator HTH, GntR XM56_11125 IPR008920 Transcription regulator FadR/GntR, C-terminal XM56_11125 IPR028374 FadR, C-terminal domain XM56_11125 IPR014178 Fatty acid response transcription factor FadR XM56_11125 IPR036390 Winged helix DNA-binding domain superfamily XM56_11125 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_11130 IPR004671 Na+/H+ antiporter NhaB XM56_11135 IPR023380 DsbB-like superfamily XM56_11135 IPR022920 Disulphide bond formation protein DsbB XM56_11135 IPR003752 Disulphide bond formation protein DsbB/BdbC XM56_11155 IPR005627 Copper homeostasis protein CutC XM56_11155 IPR023648 Copper homeostasis CutC domain XM56_11155 IPR036822 Copper homeostasis (CutC) domain superfamily XM56_11160 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase XM56_11160 IPR010393 Protein of unknown function DUF991 XM56_11165 IPR008909 DALR anticodon binding XM56_11165 IPR035684 Arginyl-tRNA synthetase, catalytic core domain XM56_11165 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding XM56_11165 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily XM56_11165 IPR005148 Arginyl tRNA synthetase N-terminal domain XM56_11165 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site XM56_11165 IPR001278 Arginine-tRNA ligase XM56_11165 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XM56_11175 IPR003714 PhoH-like protein XM56_11175 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_11190 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD XM56_11195 IPR001173 Glycosyltransferase 2-like XM56_11195 IPR029044 Nucleotide-diphospho-sugar transferases XM56_11195 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA XM56_11200 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB XM56_11200 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel XM56_11200 IPR002509 NodB homology domain XM56_11200 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal XM56_11210 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal XM56_11210 IPR036005 Creatinase/aminopeptidase-like XM56_11210 IPR000994 Peptidase M24 XM56_11215 IPR024726 Ferric iron reductase, C-terminal XM56_11215 IPR022770 Ferric iron reductase FhuF domain XM56_11215 IPR008090 Ferric iron reductase XM56_11220 IPR012947 Threonyl/alanyl tRNA synthetase, SAD XM56_11220 IPR009000 Translation protein, beta-barrel domain superfamily XM56_11220 IPR002318 Alanine-tRNA ligase, class IIc XM56_11220 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily XM56_11220 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain XM56_11220 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal XM56_11220 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria XM56_11220 IPR003156 DHHA1 domain XM56_11220 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily XM56_11225 IPR005119 LysR, substrate-binding XM56_11225 IPR000847 Transcription regulator HTH, LysR XM56_11225 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_11225 IPR036390 Winged helix DNA-binding domain superfamily XM56_11230 IPR015392 Domain of unknown function DUF1971 XM56_11230 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XM56_11230 IPR015985 Tellurite resistance methyltransferase TehB-like domain XM56_11230 IPR014710 RmlC-like jelly roll fold XM56_11230 IPR014431 Tellurite resistance methyltransferase, TehB type-2 XM56_11230 IPR004537 Tellurite resistance methyltransferase, TehB XM56_11240 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant XM56_11240 IPR036249 Thioredoxin-like superfamily XM56_11240 IPR013766 Thioredoxin domain XM56_11240 IPR023555 Thiol-disulphide oxidoreductase ResA XM56_11245 IPR003838 ABC transporter permease protein domain XM56_11245 IPR003439 ABC transporter-like XM56_11245 IPR017871 ABC transporter, conserved site XM56_11245 IPR017911 ABC transporter, macrolide export, ATP-binding domain XM56_11245 IPR025857 MacB-like periplasmic core domain XM56_11245 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_11245 IPR003593 AAA+ ATPase domain XM56_11255 IPR003838 ABC transporter permease protein domain XM56_11255 IPR017871 ABC transporter, conserved site XM56_11255 IPR017911 ABC transporter, macrolide export, ATP-binding domain XM56_11255 IPR003593 AAA+ ATPase domain XM56_11255 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_11255 IPR025857 MacB-like periplasmic core domain XM56_11255 IPR003439 ABC transporter-like XM56_11265 IPR018470 Periplasmic metal-binding protein Tp34-type XM56_11265 IPR038482 Periplasmic metal-binding protein tp34-type superfamily XM56_11270 IPR004923 Iron permease FTR1/Fip1/EfeU XM56_11285 IPR015868 Glutaminase XM56_11285 IPR012338 Beta-lactamase/transpeptidase-like XM56_11290 IPR013022 Xylose isomerase-like, TIM barrel domain XM56_11290 IPR036237 Xylose isomerase-like superfamily XM56_11290 IPR026040 Hydroxypyruvate isomerase-like XM56_11295 IPR036409 Class II aldolase/adducin N-terminal domain superfamily XM56_11295 IPR001303 Class II aldolase/adducin N-terminal XM56_11300 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily XM56_11300 IPR031475 Nucleotide-binding C-terminal domain XM56_11300 IPR042213 Nucleotide-binding, C-terminal domain superfamily XM56_11300 IPR010737 Four-carbon acid sugar kinase, N-terminal domain XM56_11305 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_11305 IPR036390 Winged helix DNA-binding domain superfamily XM56_11305 IPR001034 DeoR-type HTH domain XM56_11305 IPR018356 Transcription regulator, HTH DeoR-type, conserved site XM56_11305 IPR037171 NagB/RpiA transferase-like XM56_11305 IPR014036 DeoR C-terminal sensor domain XM56_11310 IPR013767 PAS fold XM56_11310 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XM56_11310 IPR003594 Histidine kinase/HSP90-like ATPase XM56_11310 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB XM56_11310 IPR039506 SpoOB, alpha-helical domain XM56_11310 IPR033463 Single cache domain 3 XM56_11310 IPR035965 PAS domain superfamily XM56_11310 IPR000014 PAS domain XM56_11310 IPR005467 Histidine kinase domain XM56_11310 IPR004358 Signal transduction histidine kinase-related protein, C-terminal XM56_11310 IPR029151 Periplasmic sensor-like domain superfamily XM56_11315 IPR024187 Signal transduction response regulator, citrate/malate metabolism XM56_11315 IPR001789 Signal transduction response regulator, receiver domain XM56_11315 IPR011006 CheY-like superfamily XM56_11320 IPR004679 2-hydroxycarboxylate transporter XM56_11320 IPR018025 2-hydroxycarboxylate transporter, Proteobacteria/Firmicutes XM56_11325 IPR004840 Amino acid permease, conserved site XM56_11325 IPR004841 Amino acid permease/ SLC12A domain XM56_11340 IPR036259 MFS transporter superfamily XM56_11340 IPR020846 Major facilitator superfamily domain XM56_11340 IPR011701 Major facilitator superfamily XM56_11345 IPR023214 HAD superfamily XM56_11345 IPR006379 HAD-superfamily hydrolase, subfamily IIB XM56_11345 IPR036412 HAD-like superfamily XM56_11345 IPR000150 Cof family XM56_11355 IPR001207 Transposase, mutator type XM56_11360 IPR013217 Methyltransferase type 12 XM56_11360 IPR016584 Methyltransferase VrtF-like XM56_11360 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XM56_11370 IPR001207 Transposase, mutator type XM56_11415 IPR023009 Tyrosine recombinase XerC/XerD XM56_11415 IPR011931 Tyrosine recombinase XerC XM56_11415 IPR010998 Integrase/recombinase, N-terminal XM56_11415 IPR002104 Integrase, catalytic domain XM56_11415 IPR004107 Integrase, SAM-like, N-terminal XM56_11415 IPR011010 DNA breaking-rejoining enzyme, catalytic core XM56_11415 IPR013762 Integrase-like, catalytic domain superfamily XM56_11420 IPR019648 Protein of unknown function DUF2511 XM56_11425 IPR008457 Copper resistance protein D XM56_11425 IPR032694 Copper transport protein C/D XM56_11430 IPR014756 Immunoglobulin E-set XM56_11430 IPR007348 CopC domain XM56_11430 IPR032694 Copper transport protein C/D XM56_11435 IPR012347 Ferritin-like XM56_11435 IPR009040 Ferritin-like diiron domain XM56_11435 IPR009078 Ferritin-like superfamily XM56_11435 IPR001519 Ferritin XM56_11435 IPR041719 Ferritin, prokaryotic-type XM56_11435 IPR008331 Ferritin/DPS protein domain XM56_11440 IPR036745 DNA polymerase III-theta superfamily XM56_11440 IPR009052 DNA polymerase III-theta, bacterial XM56_11445 IPR000073 Alpha/beta hydrolase fold-1 XM56_11445 IPR029058 Alpha/Beta hydrolase fold XM56_11445 IPR002410 Peptidase S33 XM56_11445 IPR005944 Proline iminopeptidase XM56_11450 IPR012337 Ribonuclease H-like superfamily XM56_11450 IPR036397 Ribonuclease H superfamily XM56_11450 IPR013520 Exonuclease, RNase T/DNA polymerase III XM56_11455 IPR029058 Alpha/Beta hydrolase fold XM56_11455 IPR002471 Peptidase S9, serine active site XM56_11455 IPR023302 Peptidase S9A, N-terminal domain XM56_11455 IPR002470 Peptidase S9A, prolyl oligopeptidase XM56_11455 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain XM56_11460 IPR038703 YebF/Cmi superfamily XM56_11460 IPR025603 YebF/Colicin-M immunity protein XM56_11460 IPR020236 Uncharacterised protein family YebF XM56_11470 IPR038627 YebG-like superfamily XM56_11470 IPR009813 Uncharacterised protein family YebG XM56_11475 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain XM56_11475 IPR014014 RNA helicase, DEAD-box type, Q motif XM56_11475 IPR011545 DEAD/DEAH box helicase domain XM56_11475 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site XM56_11475 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_11475 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily XM56_11475 IPR014001 Helicase superfamily 1/2, ATP-binding domain XM56_11475 IPR028619 ATP-dependent RNA helicase DbpA XM56_11475 IPR001650 Helicase, C-terminal XM56_11480 IPR013815 ATP-grasp fold, subdomain 1 XM56_11480 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type XM56_11480 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase XM56_11480 IPR011761 ATP-grasp fold XM56_11480 IPR016185 Pre-ATP-grasp domain superfamily XM56_11480 IPR011054 Rudiment single hybrid motif XM56_11485 IPR005371 Uncharacterised protein family UPF0181 XM56_11490 IPR019999 Anthranilate synthase component I-like XM56_11490 IPR006805 Anthranilate synthase component I, N-terminal XM56_11490 IPR005801 ADC synthase XM56_11490 IPR005802 Aminodeoxychorismate synthase, component I XM56_11490 IPR015890 Chorismate-utilising enzyme, C-terminal XM56_11495 IPR015797 NUDIX hydrolase-like domain superfamily XM56_11495 IPR000086 NUDIX hydrolase domain XM56_11495 IPR000059 NUDIX hydrolase, NudL, conserved site XM56_11495 IPR023735 Uncharacterised nudix hydrolase NudL XM56_11500 IPR005131 Serine dehydratase beta chain XM56_11500 IPR005130 Serine dehydratase-like, alpha subunit XM56_11500 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form XM56_11500 IPR029009 Allosteric substrate binding domain superfamily XM56_11510 IPR005496 Integral membrane protein TerC XM56_11510 IPR036318 FAD-binding, type PCMH-like superfamily XM56_11510 IPR016169 FAD-binding, type PCMH, subdomain 2 XM56_11510 IPR005170 Transporter-associated domain XM56_11510 IPR000644 CBS domain XM56_11515 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup XM56_11515 IPR004720 Phosphotransferase system, sorbose subfamily IIB component XM56_11515 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily XM56_11515 IPR033887 PTS system mannose/sorbose specific IIA subunit XM56_11515 IPR004701 Phosphotransferase system, mannose-type IIA component XM56_11515 IPR013789 Phosphotransferase system, mannose family IIA component XM56_11515 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily XM56_11520 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit XM56_11525 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component XM56_11530 IPR009328 Protein of unknown function DUF986 XM56_11535 IPR003810 Putative manganese efflux pump XM56_11535 IPR022929 Putative manganese efflux pump MntP XM56_11540 IPR010105 TonB-dependent siderophore receptor XM56_11540 IPR039423 TonB-dependent receptor-like XM56_11540 IPR000531 TonB-dependent receptor-like, beta-barrel XM56_11540 IPR037066 TonB-dependent receptor, plug domain superfamily XM56_11540 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily XM56_11540 IPR030149 TonB-dependent siderophore receptor FcuA/FatA XM56_11540 IPR012910 TonB-dependent receptor, plug domain XM56_11540 IPR010917 TonB-dependent receptor, conserved site XM56_11540 IPR010916 TonB box, conserved site XM56_11545 IPR000160 GGDEF domain XM56_11545 IPR013655 PAS fold-3 XM56_11545 IPR000014 PAS domain XM56_11545 IPR035919 EAL domain superfamily XM56_11545 IPR001610 PAC motif XM56_11545 IPR029787 Nucleotide cyclase XM56_11545 IPR013656 PAS fold-4 XM56_11545 IPR035965 PAS domain superfamily XM56_11545 IPR001633 EAL domain XM56_11545 IPR000700 PAS-associated, C-terminal XM56_11545 IPR007895 MASE1 XM56_11555 IPR025714 Methyltransferase domain XM56_11555 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted XM56_11555 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XM56_11560 IPR036138 Penicillin-binding protein, dimerisation domain superfamily XM56_11560 IPR001460 Penicillin-binding protein, transpeptidase XM56_11560 IPR005311 Penicillin-binding protein, dimerisation domain XM56_11560 IPR012338 Beta-lactamase/transpeptidase-like XM56_11560 IPR037532 Peptidoglycan D,D-transpeptidase FtsI XM56_11570 IPR002059 Cold-shock protein, DNA-binding XM56_11570 IPR019844 Cold-shock (CSD) domain XM56_11570 IPR012340 Nucleic acid-binding, OB-fold XM56_11570 IPR012156 Cold shock, CspA XM56_11570 IPR011129 Cold shock domain XM56_11575 IPR019672 Protein of unknown function DUF2627 XM56_11580 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP XM56_11580 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel XM56_11585 IPR004841 Amino acid permease/ SLC12A domain XM56_11585 IPR004840 Amino acid permease, conserved site XM56_11600 IPR025594 YebO-like protein XM56_11605 IPR025611 YobH-like protein XM56_11610 IPR020262 Uncharacterised protein family YecJ XM56_11620 IPR009057 Homeobox-like domain superfamily XM56_11620 IPR018060 DNA binding HTH domain, AraC-type XM56_11620 IPR018062 HTH domain AraC-type, conserved site XM56_11620 IPR020449 Transcription regulator HTH, AraC- type XM56_11630 IPR004754 Amino acid antiporter XM56_11630 IPR022461 Arginine/ornithine antiporter XM56_11630 IPR002293 Amino acid/polyamine transporter I XM56_11640 IPR003593 AAA+ ATPase domain XM56_11640 IPR011527 ABC transporter type 1, transmembrane domain XM56_11640 IPR036640 ABC transporter type 1, transmembrane domain superfamily XM56_11640 IPR003439 ABC transporter-like XM56_11640 IPR017871 ABC transporter, conserved site XM56_11640 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_11640 IPR039421 Type I protein exporter XM56_11650 IPR003539 Cytolethal distending toxin B XM56_11650 IPR005135 Endonuclease/exonuclease/phosphatase XM56_11650 IPR036691 Endonuclease/exonuclease/phosphatase superfamily XM56_11660 IPR013515 Phytochrome, central region XM56_11660 IPR001294 Phytochrome XM56_11660 IPR016132 Phytochrome chromophore attachment domain XM56_11660 IPR029787 Nucleotide cyclase XM56_11660 IPR001633 EAL domain XM56_11660 IPR035919 EAL domain superfamily XM56_11660 IPR003018 GAF domain XM56_11660 IPR029016 GAF-like domain superfamily XM56_11660 IPR000160 GGDEF domain XM56_11670 IPR010486 HNS-dependent expression A/B XM56_11670 IPR028623 HNS-dependent expression B XM56_11670 IPR038303 HNS-dependent expression A/B superfamily XM56_11675 IPR009739 Lysozyme inhibitor LprI, N-terminal XM56_11700 IPR036390 Winged helix DNA-binding domain superfamily XM56_11700 IPR002577 Helix-turn-helix, HxlR type XM56_11700 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_11705 IPR008030 NmrA-like domain XM56_11705 IPR036291 NAD(P)-binding domain superfamily XM56_11720 IPR015927 Peptidase S24/S26A/S26B/S26C XM56_11720 IPR006197 Peptidase S24, LexA-like XM56_11720 IPR036286 LexA/Signal peptidase-like superfamily XM56_11720 IPR039418 LexA-like XM56_11725 IPR025188 Domain of unknown function DUF4113 XM56_11725 IPR001126 UmuC domain XM56_11725 IPR017961 DNA polymerase, Y-family, little finger domain XM56_11725 IPR036775 DNA polymerase, Y-family, little finger domain superfamily XM56_11730 IPR003660 HAMP domain XM56_11730 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain XM56_11730 IPR004090 Chemotaxis methyl-accepting receptor XM56_11730 IPR013655 PAS fold-3 XM56_11730 IPR001610 PAC motif XM56_11730 IPR000014 PAS domain XM56_11730 IPR035965 PAS domain superfamily XM56_11740 IPR028082 Periplasmic binding protein-like I XM56_11740 IPR010982 Lambda repressor-like, DNA-binding domain superfamily XM56_11740 IPR000843 LacI-type HTH domain XM56_11740 IPR001761 Periplasmic binding protein/LacI sugar binding domain XM56_11745 IPR001362 Glycoside hydrolase, family 32 XM56_11745 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily XM56_11745 IPR013189 Glycosyl hydrolase family 32, C-terminal XM56_11745 IPR013148 Glycosyl hydrolase family 32, N-terminal XM56_11745 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily XM56_11745 IPR006232 Sucrose-6-phosphate hydrolase XM56_11745 IPR018053 Glycoside hydrolase, family 32, active site XM56_11750 IPR036259 MFS transporter superfamily XM56_11750 IPR020846 Major facilitator superfamily domain XM56_11750 IPR018457 LacY/RafB permease family, conserved site XM56_11750 IPR000576 LacY/RafB permease family XM56_11765 IPR024084 Isopropylmalate dehydrogenase-like domain XM56_11765 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site XM56_11765 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic XM56_11795 IPR024084 Isopropylmalate dehydrogenase-like domain XM56_11795 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site XM56_11795 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic XM56_11800 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F XM56_11800 IPR006145 Pseudouridine synthase, RsuA/RluA XM56_11800 IPR020103 Pseudouridine synthase, catalytic domain superfamily XM56_11800 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site XM56_11800 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain XM56_11805 IPR020084 NUDIX hydrolase, conserved site XM56_11805 IPR015797 NUDIX hydrolase-like domain superfamily XM56_11805 IPR020476 NUDIX hydrolase XM56_11805 IPR033713 Phosphatase NudJ XM56_11805 IPR000086 NUDIX hydrolase domain XM56_11810 IPR023382 Adenine nucleotide alpha hydrolase-like domains XM56_11810 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XM56_11810 IPR004506 tRNA-specific 2-thiouridylase XM56_11815 IPR035932 HflD-like superfamily XM56_11815 IPR007451 High frequency lysogenization protein HflD XM56_11820 IPR013539 Adenylosuccinate lyase PurB, C-terminal XM56_11820 IPR004769 Adenylosuccinate lyase XM56_11820 IPR020557 Fumarate lyase, conserved site XM56_11820 IPR000362 Fumarate lyase family XM56_11820 IPR022761 Fumarate lyase, N-terminal XM56_11820 IPR008948 L-Aspartase-like XM56_11820 IPR024083 Fumarase/histidase, N-terminal XM56_11830 IPR039420 Transcriptional regulatory protein WalR-like XM56_11830 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_11830 IPR011006 CheY-like superfamily XM56_11830 IPR001867 OmpR/PhoB-type DNA-binding domain XM56_11830 IPR001789 Signal transduction response regulator, receiver domain XM56_11835 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XM56_11835 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily XM56_11835 IPR015014 PhoQ Sensor XM56_11835 IPR005467 Histidine kinase domain XM56_11835 IPR038429 PhoQ Sensor superfamily XM56_11835 IPR003594 Histidine kinase/HSP90-like ATPase XM56_11835 IPR003660 HAMP domain XM56_11835 IPR004358 Signal transduction histidine kinase-related protein, C-terminal XM56_11840 IPR003347 JmjC domain XM56_11840 IPR039994 JmjC domain-containing XM56_11845 IPR010161 Peptidase M20B, tripeptide aminopeptidase XM56_11845 IPR011650 Peptidase M20, dimerisation domain XM56_11845 IPR002933 Peptidase M20 XM56_11845 IPR036264 Bacterial exopeptidase dimerisation domain XM56_11845 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site XM56_11850 IPR027546 Sirtuin, class III XM56_11850 IPR026590 Sirtuin family, catalytic core domain XM56_11850 IPR029035 DHS-like NAD/FAD-binding domain superfamily XM56_11850 IPR026591 Sirtuin, catalytic core small domain superfamily XM56_11850 IPR003000 Sirtuin family XM56_11855 IPR000600 ROK family XM56_11855 IPR023505 N-acetyl-D-glucosamine kinase XM56_11860 IPR011926 Lipoprotein-releasing system transmembrane protein LolE, gammaproteobacteria type XM56_11860 IPR025857 MacB-like periplasmic core domain XM56_11860 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E XM56_11860 IPR003838 ABC transporter permease protein domain XM56_11865 IPR003593 AAA+ ATPase domain XM56_11865 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_11865 IPR015854 ABC transporter, lipoprotein release, LolD XM56_11865 IPR017871 ABC transporter, conserved site XM56_11865 IPR011924 Lipoprotein releasing system, ATP-binding protein XM56_11865 IPR003439 ABC transporter-like XM56_11870 IPR003838 ABC transporter permease protein domain XM56_11870 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E XM56_11870 IPR025857 MacB-like periplasmic core domain XM56_11875 IPR014001 Helicase superfamily 1/2, ATP-binding domain XM56_11875 IPR011545 DEAD/DEAH box helicase domain XM56_11875 IPR003711 CarD-like/TRCF domain XM56_11875 IPR036101 CarD-like/TRCF domain superfamily XM56_11875 IPR004576 Transcription-repair coupling factor XM56_11875 IPR001650 Helicase, C-terminal XM56_11875 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_11875 IPR041471 UvrB, interaction domain XM56_11875 IPR005118 Transcription-repair-coupling factor, C-terminal domain XM56_11875 IPR037235 TRCF-like, C-terminal domain XM56_11880 IPR008816 Glycine zipper 2TM domain XM56_11885 IPR036188 FAD/NAD(P)-binding domain superfamily XM56_11885 IPR023753 FAD/NAD(P)-binding domain XM56_11890 IPR029058 Alpha/Beta hydrolase fold XM56_11890 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA XM56_11890 IPR022987 Uncharacterised protein family UPF0227 XM56_11895 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily XM56_11895 IPR019800 Glycoside hydrolase, family 3, active site XM56_11895 IPR001764 Glycoside hydrolase, family 3, N-terminal XM56_11895 IPR022956 Beta-hexosaminidase, bacterial XM56_11895 IPR017853 Glycoside hydrolase superfamily XM56_11900 IPR014093 Thiamine kinase XM56_11900 IPR011009 Protein kinase-like domain superfamily XM56_11900 IPR002575 Aminoglycoside phosphotransferase XM56_11905 IPR012640 Membrane lipoprotein, lipid attachment site XM56_11905 IPR014094 Penicillin-binding protein activator LpoB XM56_11910 IPR010824 Protein of unknown function DUF1425 XM56_11910 IPR038483 YcfL-like superfamily XM56_11915 IPR001310 Histidine triad (HIT) protein XM56_11915 IPR019808 Histidine triad, conserved site XM56_11915 IPR011146 HIT-like domain XM56_11915 IPR036265 HIT-like superfamily XM56_11920 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal XM56_11920 IPR036291 NAD(P)-binding domain superfamily XM56_11925 IPR036390 Winged helix DNA-binding domain superfamily XM56_11925 IPR023767 Transcriptional regulator SgrR XM56_11925 IPR039424 Solute-binding protein family 5 XM56_11925 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain XM56_11925 IPR000914 Solute-binding protein family 5 domain XM56_11930 IPR034491 Anaerobic Ser-type sulfatase-maturating enzyme XM56_11930 IPR007197 Radical SAM XM56_11930 IPR023885 4Fe4S-binding SPASM domain XM56_11930 IPR013785 Aldolase-type TIM barrel XM56_11940 IPR003439 ABC transporter-like XM56_11940 IPR036640 ABC transporter type 1, transmembrane domain superfamily XM56_11940 IPR011527 ABC transporter type 1, transmembrane domain XM56_11940 IPR003593 AAA+ ATPase domain XM56_11940 IPR039421 Type I protein exporter XM56_11940 IPR033838 Colicin V processing peptidase XM56_11940 IPR017871 ABC transporter, conserved site XM56_11940 IPR005074 Peptidase C39, bacteriocin processing XM56_11940 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_11950 IPR001996 Phosphotransferase system, IIB component, type 1 XM56_11950 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site XM56_11950 IPR011299 PTS system glucose-specific IIBC component XM56_11950 IPR036878 Glucose permease domain IIB XM56_11950 IPR013013 Phosphotransferase system, EIIC component, type 1 XM56_11950 IPR003352 Phosphotransferase system, EIIC XM56_11950 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component XM56_11955 IPR001130 TatD family XM56_11955 IPR015991 Uncharacterised hydrolase TatD-type XM56_11955 IPR032466 Metal-dependent hydrolase XM56_11955 IPR018228 Deoxyribonuclease, TatD-related, conserved site XM56_11960 IPR015199 DNA polymerase III, delta subunit, C-terminal XM56_11960 IPR004622 DNA polymerase III, delta prime subunit XM56_11960 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal XM56_11960 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_11965 IPR018094 Thymidylate kinase XM56_11965 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_11965 IPR039430 Thymidylate kinase-like domain XM56_11965 IPR018095 Thymidylate kinase, conserved site XM56_11970 IPR003770 Endolytic murein transglycosylase XM56_11975 IPR017824 Aminodeoxychorismate lyase, class IV XM56_11975 IPR018300 Aminotransferase, class IV, conserved site XM56_11975 IPR036038 Aminotransferase-like, PLP-dependent enzymes XM56_11975 IPR001544 Aminotransferase class IV XM56_11980 IPR018201 Beta-ketoacyl synthase, active site XM56_11980 IPR014030 Beta-ketoacyl synthase, N-terminal XM56_11980 IPR016039 Thiolase-like XM56_11980 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain XM56_11980 IPR014031 Beta-ketoacyl synthase, C-terminal XM56_11980 IPR000794 Beta-ketoacyl synthase XM56_11980 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 XM56_11985 IPR009081 Phosphopantetheine binding ACP domain XM56_11985 IPR006162 Phosphopantetheine attachment site XM56_11985 IPR003231 Acyl carrier protein (ACP) XM56_11985 IPR036736 ACP-like superfamily XM56_11990 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase XM56_11990 IPR020904 Short-chain dehydrogenase/reductase, conserved site XM56_11990 IPR036291 NAD(P)-binding domain superfamily XM56_11990 IPR002347 Short-chain dehydrogenase/reductase SDR XM56_11995 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding XM56_11995 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type XM56_11995 IPR024925 Malonyl CoA-acyl carrier protein transacylase XM56_11995 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase XM56_11995 IPR014043 Acyl transferase XM56_11995 IPR001227 Acyl transferase domain superfamily XM56_12000 IPR016039 Thiolase-like XM56_12000 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III XM56_12000 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 XM56_12000 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal XM56_12005 IPR003664 Fatty acid synthesis PlsX protein XM56_12005 IPR012281 Phospholipid biosynthesis protein, PlsX-like XM56_12010 IPR002677 Ribosomal protein L32p XM56_12010 IPR011332 Zinc-binding ribosomal protein XM56_12015 IPR003772 Large ribosomal RNA subunit accumulation protein YceD XM56_12015 IPR039255 Large ribosomal RNA subunit accumulation protein YceD, bacteria XM56_12020 IPR029001 Inosine triphosphate pyrophosphatase-like XM56_12020 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein XM56_12025 IPR002942 RNA-binding S4 domain XM56_12025 IPR036986 RNA-binding S4 domain superfamily XM56_12025 IPR006145 Pseudouridine synthase, RsuA/RluA XM56_12025 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site XM56_12025 IPR006225 Pseudouridine synthase, RluC/RluD XM56_12025 IPR020103 Pseudouridine synthase, catalytic domain superfamily XM56_12030 IPR021968 Polyribonucleotide phosphorylase C-terminal XM56_12030 IPR028878 Ribonuclease E XM56_12030 IPR012340 Nucleic acid-binding, OB-fold XM56_12030 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G XM56_12030 IPR004659 Ribonuclease E/G XM56_12030 IPR022967 RNA-binding domain, S1 XM56_12030 IPR003029 S1 domain XM56_12035 IPR007138 Antibiotic biosynthesis monooxygenase domain XM56_12035 IPR011008 Dimeric alpha-beta barrel XM56_12040 IPR002195 Dihydroorotase, conserved site XM56_12040 IPR004721 Dihydroorotase homodimeric type XM56_12040 IPR032466 Metal-dependent hydrolase XM56_12040 IPR006680 Amidohydrolase-related XM56_12045 IPR010391 DNA damage-inducible protein DinI-like XM56_12045 IPR036687 DinI-like superfamily XM56_12050 IPR025730 Biofilm regulator BssS XM56_12055 IPR036188 FAD/NAD(P)-binding domain superfamily XM56_12055 IPR006076 FAD dependent oxidoreductase XM56_12055 IPR023493 N-methyl-L-tryptophan oxidase MTOX XM56_12060 IPR001789 Signal transduction response regulator, receiver domain XM56_12060 IPR000792 Transcription regulator LuxR, C-terminal XM56_12060 IPR016032 Signal transduction response regulator, C-terminal effector XM56_12065 IPR002549 Transmembrane protein TqsA-like XM56_12080 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain XM56_12080 IPR006656 Molybdopterin oxidoreductase XM56_12080 IPR006657 Molybdopterin dinucleotide-binding domain XM56_12080 IPR041929 Tetrathionate reductase subunit A, N-terminal XM56_12080 IPR009010 Aspartate decarboxylase-like domain superfamily XM56_12080 IPR037946 Tetrathionate reductase subunit A, MopB domain XM56_12085 IPR005614 NrfD family XM56_12090 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site XM56_12090 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain XM56_12090 IPR006311 Twin-arginine translocation pathway, signal sequence XM56_12095 IPR005467 Histidine kinase domain XM56_12095 IPR003594 Histidine kinase/HSP90-like ATPase XM56_12095 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily XM56_12095 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain XM56_12095 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XM56_12095 IPR004358 Signal transduction histidine kinase-related protein, C-terminal XM56_12100 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_12100 IPR001789 Signal transduction response regulator, receiver domain XM56_12100 IPR011006 CheY-like superfamily XM56_12100 IPR000792 Transcription regulator LuxR, C-terminal XM56_12105 IPR004960 Bacterial lipid A biosynthesis acyltransferase XM56_12105 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase XM56_12110 IPR022385 Rhs repeat-associated core XM56_12110 IPR041508 Toxin complex C-like repeat XM56_12110 IPR025968 YwqJ-like deaminase XM56_12115 IPR008430 Cytotoxic necrotizing factor, Rho-activating domain XM56_12115 IPR037040 Cytotoxic necrotizing factor, Rho-activating domain superfamily XM56_12115 IPR011324 Cytotoxic necrotizing factor-like, catalytic XM56_12115 IPR022385 Rhs repeat-associated core XM56_12115 IPR041508 Toxin complex C-like repeat XM56_12120 IPR032808 DoxX family XM56_12130 IPR005279 Dipeptide/tripeptide permease XM56_12130 IPR020846 Major facilitator superfamily domain XM56_12130 IPR036259 MFS transporter superfamily XM56_12130 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site XM56_12130 IPR000109 Proton-dependent oligopeptide transporter family XM56_12145 IPR010780 Protein of unknown function DUF1375 XM56_12150 IPR023725 Glucan biosynthesis glucosyltransferase H XM56_12150 IPR001173 Glycosyltransferase 2-like XM56_12150 IPR029044 Nucleotide-diphospho-sugar transferases XM56_12155 IPR011013 Galactose mutarotase-like domain superfamily XM56_12155 IPR014718 Glycoside hydrolase-type carbohydrate-binding XM56_12155 IPR014438 Glucan biosynthesis protein MdoG/MdoD XM56_12155 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal XM56_12155 IPR013783 Immunoglobulin-like fold XM56_12155 IPR014756 Immunoglobulin E-set XM56_12155 IPR023704 Glucan biosynthesis protein G XM56_12160 IPR002656 Acyltransferase 3 XM56_12160 IPR023723 Glucan biosynthesis protein C XM56_12175 IPR006153 Cation/H+ exchanger XM56_12175 IPR036318 FAD-binding, type PCMH-like superfamily XM56_12175 IPR006037 Regulator of K+ conductance, C-terminal XM56_12175 IPR023729 K(+)/H(+) antiporter NhaP2 XM56_12175 IPR016169 FAD-binding, type PCMH, subdomain 2 XM56_12175 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily XM56_12175 IPR005170 Transporter-associated domain XM56_12175 IPR030151 K(+)/H(+) antiporter NhaP XM56_12175 IPR038770 Sodium/solute symporter superfamily XM56_12185 IPR018311 Autoinducer synthesis, conserved site XM56_12185 IPR001690 Autoinducer synthase XM56_12185 IPR016181 Acyl-CoA N-acyltransferase XM56_12190 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain XM56_12190 IPR016032 Signal transduction response regulator, C-terminal effector XM56_12190 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_12190 IPR000792 Transcription regulator LuxR, C-terminal XM56_12190 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily XM56_12195 IPR011990 Tetratricopeptide-like helical domain superfamily XM56_12195 IPR019734 Tetratricopeptide repeat XM56_12195 IPR013026 Tetratricopeptide repeat-containing domain XM56_12200 IPR017565 Formate-dependent nitrite reductase complex, subunit NrfF XM56_12200 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily XM56_12200 IPR005616 CcmH/CycL/Ccl2/NrfF family XM56_12205 IPR017937 Thioredoxin, conserved site XM56_12205 IPR036249 Thioredoxin-like superfamily XM56_12205 IPR013766 Thioredoxin domain XM56_12205 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE XM56_12205 IPR013740 Redoxin XM56_12210 IPR017563 Cytochrome c nitrate reductase biogenesis protein NrfE XM56_12210 IPR003570 Cytochrome c-type biogenesis protein NrfE XM56_12210 IPR003568 Cytochrome c-type biogenesis protein CcmF XM56_12210 IPR003567 Cytochrome c-type biogenesis protein XM56_12210 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal XM56_12210 IPR002541 Cytochrome c assembly protein XM56_12215 IPR005614 NrfD family XM56_12215 IPR017566 NrfD XM56_12220 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal XM56_12220 IPR006311 Twin-arginine translocation pathway, signal sequence XM56_12220 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain XM56_12220 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site XM56_12220 IPR017567 Cytochrome c nitrite reductase, Fe-S protein XM56_12225 IPR023155 Cytochrome c-552/4 XM56_12225 IPR017564 Cytochrome c nitrite reductase, pentahaem subunit XM56_12225 IPR010177 Doubled CXXCH motif XM56_12225 IPR011031 Multihaem cytochrome XM56_12225 IPR036280 Multiheme cytochrome superfamily XM56_12230 IPR011031 Multihaem cytochrome XM56_12230 IPR003321 Cytochrome c552 XM56_12230 IPR036280 Multiheme cytochrome superfamily XM56_12230 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit XM56_12240 IPR007453 Sulphur transfer protein DsrC/TusE XM56_12240 IPR025526 DsrC-like domain superfamily XM56_12240 IPR042072 DsrC-like protein, C-terminal domain XM56_12245 IPR001792 Acylphosphatase-like domain XM56_12245 IPR036046 Acylphosphatase-like domain superfamily XM56_12245 IPR020456 Acylphosphatase XM56_12245 IPR028627 Acylphosphatase, bacteria XM56_12245 IPR017968 Acylphosphatase, conserved site XM56_12260 IPR002478 PUA domain XM56_12260 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XM56_12260 IPR019614 S-adenosylmethionine-dependent methyltransferase XM56_12260 IPR015947 PUA-like superfamily XM56_12260 IPR036974 PUA domain superfamily XM56_12260 IPR041532 RlmI, PUA-like domain XM56_12260 IPR023542 rRNA large subunit methyltransferase I XM56_12265 IPR011722 Hemimethylated DNA-binding domain XM56_12265 IPR036623 Hemimethylated DNA-binding domain superfamily XM56_12265 IPR022866 Heat shock protein HspQ XM56_12270 IPR003781 CoA-binding XM56_12270 IPR036291 NAD(P)-binding domain superfamily XM56_12275 IPR018635 Uncharacterised protein family UPF0319 XM56_12280 IPR036914 Methylglyoxal synthase-like domain superfamily XM56_12280 IPR018148 Methylglyoxal synthase, active site XM56_12280 IPR004363 Methylglyoxal synthase XM56_12280 IPR011607 Methylglyoxal synthase-like domain XM56_12285 IPR014016 UvrD-like helicase, ATP-binding domain XM56_12285 IPR014017 UvrD-like DNA helicase, C-terminal XM56_12285 IPR022161 DNA helicase IV, N-terminal domain XM56_12285 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_12285 IPR034739 UvrD/AddA helicase, N-terminal XM56_12285 IPR000212 DNA helicase, UvrD/REP type XM56_12290 IPR005185 Inner membrane component domain XM56_12290 IPR031308 Uncharacterised conserved protein UCP028777 XM56_12295 IPR010020 Integral membrane protein, YccS/YhfK XM56_12295 IPR032692 Integral membrane protein YccS, N-terminal XM56_12295 IPR010019 Integral membrane protein, YccS XM56_12300 IPR007077 TfoX, C-terminal XM56_12300 IPR007076 TfoX, N-terminal XM56_12300 IPR026256 Transcriptional regulator, TfoX/Sxy-type XM56_12305 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_12305 IPR004596 Cell division suppressor protein, SulA XM56_12310 IPR006664 Outer membrane protein, bacterial XM56_12310 IPR000498 Outer membrane protein OmpA-like, transmembrane domain XM56_12310 IPR002368 Outer membrane protein, OmpA XM56_12310 IPR006665 OmpA-like domain XM56_12310 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel XM56_12310 IPR036737 OmpA-like domain superfamily XM56_12310 IPR006690 Outer membrane protein, OmpA-like, conserved site XM56_12315 IPR038339 MatP, N-terminal domain superfamily XM56_12315 IPR013321 Arc-type ribbon-helix-helix XM56_12315 IPR009390 Macrodomain Ter protein, MatP XM56_12315 IPR035087 MatP, N-terminal XM56_12315 IPR035375 MatP, C-terminal ribbon-helix-helix domain XM56_12320 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup XM56_12320 IPR041699 Lon protease, AAA domain XM56_12320 IPR008269 Peptidase S16, Lon proteolytic domain XM56_12320 IPR027065 Lon protease XM56_12320 IPR020568 Ribosomal protein S5 domain 2-type fold XM56_12325 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ XM56_12325 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA XM56_12325 IPR029069 HotDog domain superfamily XM56_12340 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 XM56_12340 IPR000794 Beta-ketoacyl synthase XM56_12340 IPR018201 Beta-ketoacyl synthase, active site XM56_12340 IPR014031 Beta-ketoacyl synthase, C-terminal XM56_12340 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain XM56_12340 IPR016039 Thiolase-like XM56_12340 IPR014030 Beta-ketoacyl synthase, N-terminal XM56_12345 IPR005586 ABC-type transport auxiliary lipoprotein component XM56_12350 IPR003399 Mce/MlaD XM56_12355 IPR007498 Intermembrane transport protein PqiA-like XM56_12355 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type XM56_12360 IPR003439 ABC transporter-like XM56_12360 IPR003593 AAA+ ATPase domain XM56_12360 IPR032781 ABC-transporter extension domain XM56_12360 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily XM56_12360 IPR032524 ABC transporter Uup, C-terminal XM56_12360 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_12360 IPR017871 ABC transporter, conserved site XM56_12365 IPR019614 S-adenosylmethionine-dependent methyltransferase XM56_12365 IPR017244 Ribosomal RNA large subunit methyltransferase K/L XM56_12365 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XM56_12365 IPR004114 THUMP domain XM56_12365 IPR002052 DNA methylase, N-6 adenine-specific, conserved site XM56_12365 IPR000241 Putative RNA methylase domain XM56_12370 IPR011037 Pyruvate kinase-like, insert domain superfamily XM56_12370 IPR036010 2Fe-2S ferredoxin-like superfamily XM56_12370 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site XM56_12370 IPR012675 Beta-grasp domain superfamily XM56_12370 IPR005302 Molybdenum cofactor sulfurase, C-terminal XM56_12370 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain XM56_12370 IPR005303 MOSC, N-terminal beta barrel XM56_12375 IPR009809 Cell division protein ZapC XM56_12380 IPR013785 Aldolase-type TIM barrel XM56_12380 IPR005720 Dihydroorotate dehydrogenase domain XM56_12380 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 XM56_12380 IPR001295 Dihydroorotate dehydrogenase, conserved site XM56_12380 IPR005719 Dihydroorotate dehydrogenase, class 2 XM56_12385 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily XM56_12385 IPR042097 Aminopeptidase N-like , N-terminal XM56_12385 IPR012779 Peptidase M1, alanyl aminopeptidase XM56_12385 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase XM56_12385 IPR014782 Peptidase M1, membrane alanine aminopeptidase XM56_12385 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold XM56_12385 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily XM56_12385 IPR027268 Peptidase M4/M1, CTD superfamily XM56_12385 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal XM56_12390 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase XM56_12390 IPR007229 Nicotinate phosphoribosyltransferase family XM56_12390 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain XM56_12390 IPR006406 Nicotinate phosphoribosyltransferase XM56_12390 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal XM56_12395 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb XM56_12395 IPR004522 Asparagine-tRNA ligase XM56_12395 IPR006195 Aminoacyl-tRNA synthetase, class II XM56_12395 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type XM56_12395 IPR012340 Nucleic acid-binding, OB-fold XM56_12395 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) XM56_12400 IPR033900 Porin domain, Gram-negative type XM56_12400 IPR023614 Porin domain superfamily XM56_12400 IPR013793 Porin, Gram-negative type, conserved site XM56_12400 IPR001897 Porin, gammaproteobacterial XM56_12400 IPR001702 Porin, Gram-negative type XM56_12405 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site XM56_12405 IPR015421 Pyridoxal phosphate-dependent transferase, major domain XM56_12405 IPR004839 Aminotransferase, class I/classII XM56_12405 IPR015424 Pyridoxal phosphate-dependent transferase XM56_12405 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 XM56_12405 IPR000796 Aspartate/other aminotransferase XM56_12415 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain XM56_12415 IPR035919 EAL domain superfamily XM56_12415 IPR001633 EAL domain XM56_12420 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like XM56_12420 IPR001279 Metallo-beta-lactamase XM56_12425 IPR006311 Twin-arginine translocation pathway, signal sequence XM56_12425 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily XM56_12425 IPR010275 Protein of unknown function DUF882 XM56_12430 IPR038063 L,D-transpeptidase catalytic domain-like XM56_12430 IPR002477 Peptidoglycan binding-like XM56_12430 IPR005490 L,D-transpeptidase catalytic domain XM56_12430 IPR036365 PGBD-like superfamily XM56_12435 IPR012090 Chromosome partition protein MukB XM56_12435 IPR032520 MukB, hinge domain XM56_12435 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_12435 IPR007406 MukB, N-terminal domain XM56_12440 IPR042037 MukE, C-terminal domain XM56_12440 IPR042038 MukE, N-terminal domain XM56_12440 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE XM56_12445 IPR036390 Winged helix DNA-binding domain superfamily XM56_12445 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_12445 IPR033439 Chromosome partition protein MukF, winged-helix domain XM56_12445 IPR033440 Chromosome partition protein MukF, middle domain XM56_12445 IPR005582 Chromosome partition protein MukF XM56_12445 IPR036141 MukF, middle domain superfamily XM56_12445 IPR033441 Chromosome partition protein MukF, C-terminal domain XM56_12445 IPR038198 MukF, C-terminal domain superfamily XM56_12450 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XM56_12450 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase XM56_12455 IPR003848 Domain of unknown function DUF218 XM56_12460 IPR002575 Aminoglycoside phosphotransferase XM56_12460 IPR011009 Protein kinase-like domain superfamily XM56_12465 IPR029044 Nucleotide-diphospho-sugar transferases XM56_12465 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase XM56_12465 IPR003329 Acylneuraminate cytidylyltransferase XM56_12470 IPR005651 Trm112-like XM56_12475 IPR019844 Cold-shock (CSD) domain XM56_12475 IPR002059 Cold-shock protein, DNA-binding XM56_12475 IPR011129 Cold shock domain XM56_12475 IPR012156 Cold shock, CspA XM56_12475 IPR012340 Nucleic acid-binding, OB-fold XM56_12480 IPR002059 Cold-shock protein, DNA-binding XM56_12480 IPR019844 Cold-shock (CSD) domain XM56_12480 IPR011129 Cold shock domain XM56_12480 IPR012156 Cold shock, CspA XM56_12480 IPR012340 Nucleic acid-binding, OB-fold XM56_12485 IPR009770 Domain of unknown function DUF1338 XM56_12490 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_12490 IPR003758 Tetraacyldisaccharide 4'-kinase XM56_12495 IPR036640 ABC transporter type 1, transmembrane domain superfamily XM56_12495 IPR003439 ABC transporter-like XM56_12495 IPR017871 ABC transporter, conserved site XM56_12495 IPR011917 ABC transporter, lipid A export, MsbA XM56_12495 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_12495 IPR011527 ABC transporter type 1, transmembrane domain XM56_12495 IPR039421 Type I protein exporter XM56_12495 IPR003593 AAA+ ATPase domain XM56_12500 IPR035681 ComA-like, MBL domain XM56_12500 IPR004477 ComEC/Rec2-related protein XM56_12500 IPR001279 Metallo-beta-lactamase XM56_12500 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like XM56_12500 IPR004797 Competence protein ComEC/Rec2 XM56_12505 IPR000119 Histone-like DNA-binding protein XM56_12505 IPR020816 Histone-like DNA-binding protein, conserved site XM56_12505 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily XM56_12505 IPR005685 Integration host factor, beta subunit XM56_12510 IPR012340 Nucleic acid-binding, OB-fold XM56_12510 IPR000110 Ribosomal protein S1 XM56_12510 IPR003029 S1 domain XM56_12510 IPR022967 RNA-binding domain, S1 XM56_12515 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_12515 IPR011994 Cytidylate kinase domain XM56_12515 IPR003136 Cytidylate kinase XM56_12520 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta XM56_12520 IPR001986 Enolpyruvate transferase domain XM56_12520 IPR036968 Enolpyruvate transferase domain superfamily XM56_12520 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase XM56_12520 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site XM56_12525 IPR015421 Pyridoxal phosphate-dependent transferase, major domain XM56_12525 IPR015424 Pyridoxal phosphate-dependent transferase XM56_12525 IPR022278 Phosphoserine aminotransferase XM56_12525 IPR000192 Aminotransferase class V domain XM56_12525 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 XM56_12525 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site XM56_12530 IPR023090 UPF0702, alpha/beta domain superfamily XM56_12530 IPR007353 Protein of unknown function DUF421 XM56_12535 IPR027475 Asparaginase/glutaminase, active site 2 XM56_12535 IPR020827 Asparaginase/glutaminase, active site 1 XM56_12535 IPR027473 L-asparaginase, C-terminal XM56_12535 IPR027474 L-asparaginase, N-terminal XM56_12535 IPR037152 L-asparaginase, N-terminal domain superfamily XM56_12535 IPR036152 Asparaginase/glutaminase-like superfamily XM56_12535 IPR004550 L-asparaginase, type II XM56_12535 IPR040919 Asparaginase/glutaminase, C-terminal XM56_12535 IPR006034 Asparaginase/glutaminase-like XM56_12540 IPR041080 YcaO cyclodehydratase, C-terminal XM56_12540 IPR003776 YcaO-like domain XM56_12545 IPR000292 Formate/nitrite transporter XM56_12545 IPR024002 Formate/nitrite transporter, conserved site XM56_12545 IPR023271 Aquaporin-like XM56_12545 IPR023999 Formate transporter FocA, putative XM56_12550 IPR019777 Formate C-acetyltransferase glycine radical, conserved site XM56_12550 IPR005949 Formate acetyltransferase XM56_12550 IPR001150 Glycine radical domain XM56_12550 IPR004184 Pyruvate formate lyase domain XM56_12555 IPR034457 Organic radical-activating enzymes XM56_12555 IPR007197 Radical SAM XM56_12555 IPR001989 Radical-activating enzyme, conserved site XM56_12555 IPR034465 Pyruvate formate-lyase activase XM56_12555 IPR012838 Pyruvate formate-lyase 1 activating enzyme XM56_12555 IPR012839 Organic radical enzyme activase XM56_12555 IPR013785 Aldolase-type TIM barrel XM56_12560 IPR023745 MSF-type transporter, YcaD XM56_12560 IPR011701 Major facilitator superfamily XM56_12560 IPR020846 Major facilitator superfamily domain XM56_12560 IPR036259 MFS transporter superfamily XM56_12570 IPR033729 Serine-tRNA ligase catalytic core domain XM56_12570 IPR006195 Aminoacyl-tRNA synthetase, class II XM56_12570 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm XM56_12570 IPR015866 Serine-tRNA synthetase, type1, N-terminal XM56_12570 IPR002317 Serine-tRNA ligase, type1 XM56_12570 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily XM56_12570 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) XM56_12575 IPR021886 MgsA AAA+ ATPase C-terminal XM56_12575 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal XM56_12575 IPR032423 AAA C-terminal domain XM56_12575 IPR003593 AAA+ ATPase domain XM56_12575 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_12575 IPR003959 ATPase, AAA-type, core XM56_12580 IPR029046 Lipoprotein localisation LolA/LolB/LppX XM56_12580 IPR004564 Outer membrane lipoprotein carrier protein LolA-like XM56_12580 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria XM56_12585 IPR036390 Winged helix DNA-binding domain superfamily XM56_12585 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_12585 IPR002543 FtsK domain XM56_12585 IPR018541 FtsK gamma domain XM56_12585 IPR025199 DNA translocase FtsK, 4TM region XM56_12585 IPR041027 FtsK alpha domain XM56_12585 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_12590 IPR011008 Dimeric alpha-beta barrel XM56_12590 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain XM56_12590 IPR019885 Transcription regulator HTH, AsnC-type, conserved site XM56_12590 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_12590 IPR036390 Winged helix DNA-binding domain superfamily XM56_12590 IPR019888 Transcription regulator AsnC-type XM56_12590 IPR011991 ArsR-like helix-turn-helix domain XM56_12590 IPR000485 AsnC-type HTH domain XM56_12595 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site XM56_12595 IPR023753 FAD/NAD(P)-binding domain XM56_12595 IPR036188 FAD/NAD(P)-binding domain superfamily XM56_12595 IPR005982 Thioredoxin reductase XM56_12600 IPR003593 AAA+ ATPase domain XM56_12600 IPR011527 ABC transporter type 1, transmembrane domain XM56_12600 IPR036640 ABC transporter type 1, transmembrane domain superfamily XM56_12600 IPR003439 ABC transporter-like XM56_12600 IPR017871 ABC transporter, conserved site XM56_12600 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD XM56_12600 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_12600 IPR039421 Type I protein exporter XM56_12605 IPR003439 ABC transporter-like XM56_12605 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_12605 IPR017871 ABC transporter, conserved site XM56_12605 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC XM56_12605 IPR036640 ABC transporter type 1, transmembrane domain superfamily XM56_12605 IPR011527 ABC transporter type 1, transmembrane domain XM56_12605 IPR003593 AAA+ ATPase domain XM56_12610 IPR016181 Acyl-CoA N-acyltransferase XM56_12610 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase XM56_12610 IPR042203 Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal XM56_12615 IPR012340 Nucleic acid-binding, OB-fold XM56_12615 IPR006196 RNA-binding domain, S1, IF1 type XM56_12615 IPR004368 Translation initiation factor IF-1 XM56_12615 IPR022967 RNA-binding domain, S1 XM56_12620 IPR003959 ATPase, AAA-type, core XM56_12620 IPR003593 AAA+ ATPase domain XM56_12620 IPR041546 ClpA/ClpB, AAA lid domain XM56_12620 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_12620 IPR019489 Clp ATPase, C-terminal XM56_12620 IPR036628 Clp, N-terminal domain superfamily XM56_12620 IPR004176 Clp, N-terminal XM56_12620 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA XM56_12620 IPR001270 ClpA/B family XM56_12620 IPR018368 ClpA/B, conserved site 1 XM56_12620 IPR028299 ClpA/B, conserved site 2 XM56_12625 IPR003769 Adaptor protein ClpS, core XM56_12625 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like XM56_12625 IPR022935 ATP-dependent Clp protease adaptor protein ClpS XM56_12630 IPR012156 Cold shock, CspA XM56_12630 IPR011129 Cold shock domain XM56_12630 IPR012340 Nucleic acid-binding, OB-fold XM56_12630 IPR012751 CspD, cold shock XM56_12630 IPR002059 Cold-shock protein, DNA-binding XM56_12630 IPR019844 Cold-shock (CSD) domain XM56_12635 IPR003439 ABC transporter-like XM56_12635 IPR025857 MacB-like periplasmic core domain XM56_12635 IPR017911 ABC transporter, macrolide export, ATP-binding domain XM56_12635 IPR017871 ABC transporter, conserved site XM56_12635 IPR003593 AAA+ ATPase domain XM56_12635 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_12635 IPR003838 ABC transporter permease protein domain XM56_12640 IPR006143 RND efflux pump, membrane fusion protein XM56_12640 IPR030190 Macrolide export protein MacA XM56_12640 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain XM56_12645 IPR007488 Protein of unknown function DUF535 XM56_12650 IPR034139 OLD protein-like, TOPRIM domain XM56_12650 IPR006171 TOPRIM domain XM56_12650 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_12650 IPR022602 Protein of unknown function DUF2813 XM56_12655 IPR005642 Lysine exporter LysO XM56_12660 IPR016099 Prismane-like, alpha/beta-sandwich XM56_12660 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase XM56_12660 IPR010048 Hydroxylamine reductase XM56_12660 IPR011254 Prismane-like superfamily XM56_12660 IPR016100 Prismane, alpha-bundle XM56_12665 IPR036010 2Fe-2S ferredoxin-like superfamily XM56_12665 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain XM56_12665 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain XM56_12665 IPR017927 FAD-binding domain, ferredoxin reductase-type XM56_12665 IPR012675 Beta-grasp domain superfamily XM56_12665 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain XM56_12665 IPR001433 Oxidoreductase FAD/NAD(P)-binding XM56_12665 IPR000951 Phthalate dioxygenase reductase XM56_12665 IPR017938 Riboflavin synthase-like beta-barrel XM56_12670 IPR029035 DHS-like NAD/FAD-binding domain superfamily XM56_12670 IPR029061 Thiamin diphosphate-binding fold XM56_12670 IPR012000 Thiamine pyrophosphate enzyme, central domain XM56_12670 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain XM56_12670 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding XM56_12670 IPR000399 TPP-binding enzyme, conserved site XM56_12675 IPR011610 S-adenosyl-L-methionine-dependent methyltransferase, putative XM56_12675 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp XM56_12675 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XM56_12680 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 XM56_12680 IPR023603 Threonine aldolase XM56_12680 IPR015421 Pyridoxal phosphate-dependent transferase, major domain XM56_12680 IPR015424 Pyridoxal phosphate-dependent transferase XM56_12680 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase XM56_12685 IPR021295 Protein of unknown function DUF2867 XM56_12685 IPR016040 NAD(P)-binding domain XM56_12685 IPR036291 NAD(P)-binding domain superfamily XM56_12690 IPR036291 NAD(P)-binding domain superfamily XM56_12690 IPR001509 NAD-dependent epimerase/dehydratase XM56_12695 IPR024289 Domain of unknown function DUF3828 XM56_12700 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_12700 IPR003439 ABC transporter-like XM56_12700 IPR003593 AAA+ ATPase domain XM56_12700 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type XM56_12700 IPR017871 ABC transporter, conserved site XM56_12705 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF XM56_12705 IPR018313 Solute-binding protein family 3, conserved site XM56_12705 IPR001320 Ionotropic glutamate receptor XM56_12705 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter XM56_12710 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain XM56_12710 IPR000515 ABC transporter type 1, transmembrane domain MetI-like XM56_12710 IPR035906 MetI-like superfamily XM56_12715 IPR035906 MetI-like superfamily XM56_12715 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain XM56_12715 IPR000515 ABC transporter type 1, transmembrane domain MetI-like XM56_12720 IPR001320 Ionotropic glutamate receptor XM56_12720 IPR018313 Solute-binding protein family 3, conserved site XM56_12720 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter XM56_12720 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF XM56_12725 IPR010280 (Uracil-5)-methyltransferase family XM56_12725 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XM56_12725 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC XM56_12725 IPR030390 RNA methyltransferase TrmA, active site XM56_12725 IPR030391 RNA methyltransferase TrmA, conserved site XM56_12730 IPR019703 Protein of unknown function DUF2593 XM56_12735 IPR035906 MetI-like superfamily XM56_12735 IPR000515 ABC transporter type 1, transmembrane domain MetI-like XM56_12740 IPR000515 ABC transporter type 1, transmembrane domain MetI-like XM56_12740 IPR035906 MetI-like superfamily XM56_12745 IPR013611 Transport-associated OB, type 2 XM56_12745 IPR003593 AAA+ ATPase domain XM56_12745 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_12745 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit XM56_12745 IPR017871 ABC transporter, conserved site XM56_12745 IPR008995 Molybdate/tungstate binding, C-terminal XM56_12745 IPR003439 ABC transporter-like XM56_12750 IPR006059 Bacterial extracellular solute-binding protein XM56_12750 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein XM56_12755 IPR019660 Putative sensory transduction regulator YbjN XM56_12760 IPR010815 Protein of unknown function DUF1418 XM56_12765 IPR036249 Thioredoxin-like superfamily XM56_12765 IPR011902 Glutaredoxin, GrxA XM56_12765 IPR014025 Glutaredoxin subgroup XM56_12765 IPR002109 Glutaredoxin XM56_12765 IPR011767 Glutaredoxin active site XM56_12770 IPR006037 Regulator of K+ conductance, C-terminal XM56_12770 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily XM56_12770 IPR023017 Transport protein YbjL, putative XM56_12770 IPR006512 YidE/YbjL duplication XM56_12780 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily XM56_12780 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase XM56_12780 IPR033879 Undecaprenyl-diphosphatase XM56_12785 IPR013785 Aldolase-type TIM barrel XM56_12785 IPR002915 DeoC/FbaB/ lacD aldolase XM56_12785 IPR028581 Deoxyribose-phosphate aldolase type I XM56_12785 IPR011343 Deoxyribose-phosphate aldolase XM56_12790 IPR037171 NagB/RpiA transferase-like XM56_12790 IPR018356 Transcription regulator, HTH DeoR-type, conserved site XM56_12790 IPR014036 DeoR C-terminal sensor domain XM56_12790 IPR001034 DeoR-type HTH domain XM56_12795 IPR004694 Hydroxy amino acid transporter XM56_12800 IPR005131 Serine dehydratase beta chain XM56_12800 IPR005130 Serine dehydratase-like, alpha subunit XM56_12800 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form XM56_12800 IPR029009 Allosteric substrate binding domain superfamily XM56_12810 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily XM56_12810 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A XM56_12810 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal XM56_12810 IPR012338 Beta-lactamase/transpeptidase-like XM56_12810 IPR015956 Penicillin-binding protein, C-terminal domain superfamily XM56_12810 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal XM56_12815 IPR005857 Cystathionine beta-synthase XM56_12815 IPR001926 Pyridoxal-phosphate dependent enzyme XM56_12815 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme XM56_12815 IPR000644 CBS domain XM56_12820 IPR015421 Pyridoxal phosphate-dependent transferase, major domain XM56_12820 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 XM56_12820 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme XM56_12820 IPR015424 Pyridoxal phosphate-dependent transferase XM56_12825 IPR035906 MetI-like superfamily XM56_12825 IPR000515 ABC transporter type 1, transmembrane domain MetI-like XM56_12830 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal XM56_12830 IPR017871 ABC transporter, conserved site XM56_12830 IPR003593 AAA+ ATPase domain XM56_12830 IPR026253 Methionine import ATP-binding protein MetN XM56_12830 IPR003439 ABC transporter-like XM56_12830 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_12830 IPR018449 NIL domain XM56_12830 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain XM56_12835 IPR004872 Lipoprotein NlpA family XM56_12845 IPR036412 HAD-like superfamily XM56_12845 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like XM56_12845 IPR023214 HAD superfamily XM56_12850 IPR010987 Glutathione S-transferase, C-terminal-like XM56_12850 IPR036282 Glutathione S-transferase, C-terminal domain superfamily XM56_12850 IPR004045 Glutathione S-transferase, N-terminal XM56_12850 IPR004046 Glutathione S-transferase, C-terminal XM56_12850 IPR036249 Thioredoxin-like superfamily XM56_12855 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily XM56_12855 IPR000531 TonB-dependent receptor-like, beta-barrel XM56_12855 IPR037066 TonB-dependent receptor, plug domain superfamily XM56_12855 IPR012910 TonB-dependent receptor, plug domain XM56_12855 IPR039426 Vitamin B12 transporter BtuB-like XM56_12855 IPR010917 TonB-dependent receptor, conserved site XM56_12855 IPR010916 TonB box, conserved site XM56_12860 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_12860 IPR003439 ABC transporter-like XM56_12860 IPR003593 AAA+ ATPase domain XM56_12860 IPR015863 ABC transporter, hemin import, HmuV XM56_12865 IPR000522 ABC transporter, permease protein, BtuC-like XM56_12865 IPR037294 ABC transporter, BtuC-like XM56_12870 IPR004840 Amino acid permease, conserved site XM56_12870 IPR004841 Amino acid permease/ SLC12A domain XM56_12875 IPR005119 LysR, substrate-binding XM56_12875 IPR000847 Transcription regulator HTH, LysR XM56_12875 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_12875 IPR036390 Winged helix DNA-binding domain superfamily XM56_12890 IPR004630 Uncharacterised protein family UPF0324, bacteria XM56_12890 IPR018383 Uncharacterised protein family UPF0324, prokaryote XM56_12895 IPR018246 AP endonuclease 2, zinc binding site XM56_12895 IPR013022 Xylose isomerase-like, TIM barrel domain XM56_12895 IPR036237 Xylose isomerase-like superfamily XM56_12895 IPR001719 AP endonuclease 2 XM56_12900 IPR042186 Outer membrane usher protein FimD, plug domain XM56_12900 IPR025949 PapC-like, C-terminal domain XM56_12900 IPR025885 PapC, N-terminal domain XM56_12900 IPR000015 Outer membrane usher protein XM56_12900 IPR037224 PapC, N-terminal domain superfamily XM56_12900 IPR018030 Fimbrial membrane usher, conserved site XM56_12905 IPR016148 Pili assembly chaperone, C-terminal XM56_12905 IPR018046 Pili assembly chaperone, conserved site XM56_12905 IPR016147 Pili assembly chaperone, N-terminal XM56_12905 IPR008962 PapD-like superfamily XM56_12905 IPR013783 Immunoglobulin-like fold XM56_12905 IPR001829 Pili assembly chaperone, bacterial XM56_12905 IPR036316 Pili assembly chaperone, C-terminal domain superfamily XM56_12915 IPR035182 Protein of unknown function PsaF XM56_12920 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_12920 IPR016032 Signal transduction response regulator, C-terminal effector XM56_12920 IPR001867 OmpR/PhoB-type DNA-binding domain XM56_12925 IPR036095 PTS system IIB component-like superfamily XM56_12925 IPR013011 Phosphotransferase system, EIIB component, type 2 XM56_12925 IPR003352 Phosphotransferase system, EIIC XM56_12925 IPR013014 Phosphotransferase system, EIIC component, type 2 XM56_12925 IPR003353 Phosphotransferase system, fructose-specific IIB subunit XM56_12925 IPR006327 Phosphotransferase system, fructose IIC component XM56_12925 IPR003501 Phosphotransferase system, EIIB component, type 2/3 XM56_12930 IPR011611 Carbohydrate kinase PfkB XM56_12930 IPR017583 Tagatose/fructose phosphokinase XM56_12930 IPR029056 Ribokinase-like XM56_12930 IPR022463 Fructose 1-phosphate kinase XM56_12930 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site XM56_12935 IPR002114 Phosphotransferase system, HPr serine phosphorylation site XM56_12935 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site XM56_12935 IPR000032 Phosphocarrier protein HPr-like XM56_12935 IPR002178 PTS EIIA type-2 domain XM56_12935 IPR016152 Phosphotransferase/anion transporter XM56_12935 IPR035895 HPr-like superfamily XM56_12940 IPR020476 NUDIX hydrolase XM56_12940 IPR036412 HAD-like superfamily XM56_12940 IPR006357 HAD-superfamily hydrolase, subfamily IIA XM56_12940 IPR023214 HAD superfamily XM56_12940 IPR015797 NUDIX hydrolase-like domain superfamily XM56_12940 IPR020084 NUDIX hydrolase, conserved site XM56_12940 IPR000086 NUDIX hydrolase domain XM56_12945 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK XM56_12945 IPR005126 NapC/NirT cytochrome c, N-terminal XM56_12945 IPR011031 Multihaem cytochrome XM56_12945 IPR038266 NapC/NirT cytochrome c superfamily XM56_12945 IPR036280 Multiheme cytochrome superfamily XM56_12950 IPR006656 Molybdopterin oxidoreductase XM56_12950 IPR041954 Trimethylamine-N-oxide reductase-like, molybdopterin-binding domain XM56_12950 IPR009010 Aspartate decarboxylase-like domain superfamily XM56_12950 IPR006657 Molybdopterin dinucleotide-binding domain XM56_12950 IPR006311 Twin-arginine translocation pathway, signal sequence XM56_12950 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase XM56_12950 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site XM56_12950 IPR041460 Molybdopterin oxidoreductase, N-terminal XM56_12955 IPR005358 Putative zinc- or iron-chelating domain containing protein XM56_12960 IPR013059 Tryptophan/tyrosine transporter XM56_12960 IPR018227 Amino acid/polyamine transporter 2 XM56_12965 IPR015365 Elongation factor P, C-terminal XM56_12965 IPR013852 Translation elongation factor P/YeiP, conserved site XM56_12965 IPR008991 Translation protein SH3-like domain superfamily XM56_12965 IPR012340 Nucleic acid-binding, OB-fold XM56_12965 IPR011897 Translation elongation factor P-like, YeiP XM56_12965 IPR013185 Translation elongation factor, KOW-like XM56_12965 IPR020599 Translation elongation factor P/YeiP XM56_12965 IPR014722 Ribosomal protein L2, domain 2 XM56_12965 IPR001059 Translation elongation factor P/YeiP, central XM56_12970 IPR004628 Mannonate dehydratase XM56_12970 IPR036237 Xylose isomerase-like superfamily XM56_12980 IPR013131 Mannitol dehydrogenase, N-terminal XM56_12980 IPR000669 Mannitol dehydrogenase XM56_12980 IPR013118 Mannitol dehydrogenase, C-terminal XM56_12980 IPR013328 6-phosphogluconate dehydrogenase, domain 2 XM56_12980 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily XM56_12980 IPR036291 NAD(P)-binding domain superfamily XM56_12980 IPR023027 Mannitol dehydrogenase, conserved site XM56_12985 IPR008920 Transcription regulator FadR/GntR, C-terminal XM56_12985 IPR036390 Winged helix DNA-binding domain superfamily XM56_12985 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_12985 IPR011711 GntR, C-terminal XM56_12985 IPR000524 Transcription regulator HTH, GntR XM56_12995 IPR003495 CobW/HypB/UreG, nucleotide-binding domain XM56_12995 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal XM56_12995 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_13000 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily XM56_13000 IPR032908 Lipid A 1-diphosphate synthase XM56_13000 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase XM56_13005 IPR038765 Papain-like cysteine peptidase superfamily XM56_13005 IPR000064 Endopeptidase, NLPC/P60 domain XM56_13015 IPR001633 EAL domain XM56_13015 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain XM56_13015 IPR035919 EAL domain superfamily XM56_13020 IPR000914 Solute-binding protein family 5 domain XM56_13020 IPR039424 Solute-binding protein family 5 XM56_13020 IPR030678 Peptide/nickel binding protein, MppA-type XM56_13025 IPR035906 MetI-like superfamily XM56_13025 IPR000515 ABC transporter type 1, transmembrane domain MetI-like XM56_13030 IPR035906 MetI-like superfamily XM56_13030 IPR025966 Oligopeptide transport permease C-like, N-terminal domain XM56_13030 IPR000515 ABC transporter type 1, transmembrane domain MetI-like XM56_13035 IPR003593 AAA+ ATPase domain XM56_13035 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_13035 IPR003439 ABC transporter-like XM56_13035 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal XM56_13035 IPR017871 ABC transporter, conserved site XM56_13040 IPR020489 Uncharacterised protein family YejG XM56_13045 IPR011701 Major facilitator superfamily XM56_13045 IPR004812 Drug resistance transporter Bcr/CmlA subfamily XM56_13045 IPR036259 MFS transporter superfamily XM56_13045 IPR020846 Major facilitator superfamily domain XM56_13045 IPR004734 Multidrug resistance protein XM56_13050 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site XM56_13050 IPR002942 RNA-binding S4 domain XM56_13050 IPR036986 RNA-binding S4 domain superfamily XM56_13050 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain XM56_13050 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F XM56_13050 IPR020103 Pseudouridine synthase, catalytic domain superfamily XM56_13050 IPR006145 Pseudouridine synthase, RsuA/RluA XM56_13055 IPR006935 Helicase/UvrB, N-terminal XM56_13055 IPR014001 Helicase superfamily 1/2, ATP-binding domain XM56_13055 IPR001650 Helicase, C-terminal XM56_13055 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_13055 IPR011332 Zinc-binding ribosomal protein XM56_13060 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal XM56_13060 IPR029751 Ribosomal protein L25 XM56_13060 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily XM56_13060 IPR020055 Ribosomal protein L25, short-form XM56_13065 IPR007358 Nucleoid-associated protein NdpA XM56_13070 IPR009857 Uncharacterised protein family UPF0352 XM56_13070 IPR023202 YejL-like superfamily XM56_13075 IPR000917 Sulfatase, N-terminal XM56_13075 IPR024588 Inner membrane protein YejM, N-terminal XM56_13075 IPR017850 Alkaline-phosphatase-like, core domain superfamily XM56_13075 IPR012159 Inner membrane protein YejM XM56_13095 IPR001207 Transposase, mutator type XM56_13110 IPR038965 Transposase InsF-like XM56_13125 IPR023561 Carbonic anhydrase, alpha-class XM56_13125 IPR036398 Alpha carbonic anhydrase domain superfamily XM56_13125 IPR018338 Carbonic anhydrase, alpha-class, conserved site XM56_13125 IPR001148 Alpha carbonic anhydrase domain XM56_13125 IPR041891 Carbonic anhydrase, prokaryotic-like XM56_13130 IPR001360 Glycoside hydrolase family 1 XM56_13130 IPR018120 Glycoside hydrolase family 1, active site XM56_13130 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site XM56_13130 IPR017853 Glycoside hydrolase superfamily XM56_13135 IPR011055 Duplicated hybrid motif XM56_13135 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component XM56_13135 IPR001996 Phosphotransferase system, IIB component, type 1 XM56_13135 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site XM56_13135 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 XM56_13135 IPR003352 Phosphotransferase system, EIIC XM56_13135 IPR013013 Phosphotransferase system, EIIC component, type 1 XM56_13135 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component XM56_13135 IPR036878 Glucose permease domain IIB XM56_13140 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_13140 IPR001347 Sugar isomerase (SIS) XM56_13140 IPR009057 Homeobox-like domain superfamily XM56_13140 IPR000281 Helix-turn-helix protein RpiR XM56_13140 IPR035472 RpiR-like, SIS domain XM56_13160 IPR010534 Bacteriophage 933W, GpQ XM56_13170 IPR036687 DinI-like superfamily XM56_13170 IPR010391 DNA damage-inducible protein DinI-like XM56_13175 IPR000036 Peptidase A26, omptin XM56_13175 IPR020079 Peptidase A26, omptin, conserved site XM56_13175 IPR020080 Outer membrane adhesin/peptidase omptin XM56_13180 IPR000727 Target SNARE coiled-coil homology domain XM56_13180 IPR029151 Periplasmic sensor-like domain superfamily XM56_13180 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain XM56_13180 IPR003660 HAMP domain XM56_13180 IPR033479 Double Cache domain 1 XM56_13180 IPR004090 Chemotaxis methyl-accepting receptor XM56_13185 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D XM56_13185 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like XM56_13185 IPR001279 Metallo-beta-lactamase XM56_13190 IPR039672 Lactose permease-like XM56_13190 IPR036259 MFS transporter superfamily XM56_13190 IPR018043 Sodium:galactoside symporter, conserved site XM56_13190 IPR001927 Sodium:galactoside symporter XM56_13195 IPR001466 Beta-lactamase-related XM56_13195 IPR012338 Beta-lactamase/transpeptidase-like XM56_13210 IPR001702 Porin, Gram-negative type XM56_13210 IPR013793 Porin, Gram-negative type, conserved site XM56_13210 IPR001897 Porin, gammaproteobacterial XM56_13210 IPR023614 Porin domain superfamily XM56_13215 IPR010129 Type I secretion membrane fusion protein, HlyD family XM56_13215 IPR006144 Secretion protein HlyD, conserved site XM56_13230 IPR011701 Major facilitator superfamily XM56_13230 IPR020846 Major facilitator superfamily domain XM56_13230 IPR036259 MFS transporter superfamily XM56_13235 IPR036641 HPT domain superfamily XM56_13235 IPR030861 Phosphotransferase RcsD XM56_13235 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain XM56_13235 IPR032306 Phosphotransferase RcsD, RcsD-ABL domain XM56_13235 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XM56_13235 IPR038616 Phosphotransferase RcsD, RcsD-ABL domain superfamily XM56_13235 IPR003594 Histidine kinase/HSP90-like ATPase XM56_13235 IPR005467 Histidine kinase domain XM56_13240 IPR030864 Transcriptional regulatory protein RcsB XM56_13240 IPR016032 Signal transduction response regulator, C-terminal effector XM56_13240 IPR001789 Signal transduction response regulator, receiver domain XM56_13240 IPR000792 Transcription regulator LuxR, C-terminal XM56_13240 IPR011006 CheY-like superfamily XM56_13240 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_13245 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal XM56_13245 IPR001789 Signal transduction response regulator, receiver domain XM56_13245 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain XM56_13245 IPR005467 Histidine kinase domain XM56_13245 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily XM56_13245 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XM56_13245 IPR003594 Histidine kinase/HSP90-like ATPase XM56_13245 IPR011006 CheY-like superfamily XM56_13245 IPR038388 RcsC, C-terminal domain superfamily XM56_13245 IPR030856 Sensor histidine kinase RcsC XM56_13245 IPR004358 Signal transduction histidine kinase-related protein, C-terminal XM56_13255 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat XM56_13255 IPR005743 DNA gyrase, subunit A XM56_13255 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily XM56_13255 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal XM56_13255 IPR013760 DNA topoisomerase, type IIA-like domain superfamily XM56_13255 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal XM56_13255 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta XM56_13260 IPR010233 Ubiquinone biosynthesis O-methyltransferase XM56_13260 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XM56_13265 IPR013346 Ribonucleotide reductase, class I , alpha subunit XM56_13265 IPR005144 ATP-cone domain XM56_13265 IPR000788 Ribonucleotide reductase large subunit, C-terminal XM56_13265 IPR039718 Ribonucleoside-diphosphate reductase large subunit XM56_13265 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal XM56_13265 IPR013509 Ribonucleotide reductase large subunit, N-terminal XM56_13270 IPR033909 Ribonucleotide reductase small subunit XM56_13270 IPR009078 Ferritin-like superfamily XM56_13270 IPR012348 Ribonucleotide reductase-like XM56_13270 IPR000358 Ribonucleotide reductase small subunit family XM56_13270 IPR030475 Ribonucleotide reductase small subunit, acitve site XM56_13275 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain XM56_13275 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site XM56_13275 IPR012675 Beta-grasp domain superfamily XM56_13275 IPR036010 2Fe-2S ferredoxin-like superfamily XM56_13280 IPR023084 Proteinase inhibitor I11, ecotin, gammaproteobacteria XM56_13280 IPR036198 Ecotin superfamily XM56_13280 IPR005658 Proteinase inhibitor I11, ecotin XM56_13285 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily XM56_13285 IPR015500 Peptidase S8, subtilisin-related XM56_13285 IPR023828 Peptidase S8, subtilisin, Ser-active site XM56_13285 IPR022398 Peptidase S8, subtilisin, His-active site XM56_13285 IPR023827 Peptidase S8, subtilisin, Asp-active site XM56_13285 IPR036852 Peptidase S8/S53 domain superfamily XM56_13285 IPR000209 Peptidase S8/S53 domain XM56_13285 IPR013783 Immunoglobulin-like fold XM56_13285 IPR034063 Fervidolysin domain XM56_13295 IPR008135 Competence-induced protein CinA XM56_13295 IPR001453 MoaB/Mog domain XM56_13295 IPR036653 CinA-like, C-terminal XM56_13295 IPR036425 MoaB/Mog-like domain superfamily XM56_13300 IPR018227 Amino acid/polyamine transporter 2 XM56_13300 IPR013061 Tryptophan/tryrosine permease, conserved site XM56_13300 IPR013059 Tryptophan/tyrosine transporter XM56_13305 IPR009998 YfaZ XM56_13305 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel XM56_13305 IPR023614 Porin domain superfamily XM56_13310 IPR002226 Catalase haem-binding site XM56_13310 IPR037060 Catalase core domain superfamily XM56_13310 IPR011614 Catalase core domain XM56_13310 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 XM56_13310 IPR010582 Catalase immune-responsive domain XM56_13310 IPR020835 Catalase superfamily XM56_13310 IPR024708 Catalase active site XM56_13310 IPR040333 Catalase, clade 3 XM56_13310 IPR018028 Catalase, mono-functional, haem-containing XM56_13315 IPR025110 AMP-binding enzyme, C-terminal domain XM56_13315 IPR020845 AMP-binding, conserved site XM56_13315 IPR000873 AMP-dependent synthetase/ligase XM56_13315 IPR042099 AMP-dependent synthetase-like superfamily XM56_13315 IPR010192 2-succinylbenzoate--CoA ligase XM56_13320 IPR010196 o-Succinylbenzoate synthase, MenC type1 XM56_13320 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal XM56_13320 IPR036849 Enolase-like, C-terminal domain superfamily XM56_13320 IPR029017 Enolase-like, N-terminal XM56_13320 IPR029065 Enolase C-terminal domain-like XM56_13325 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site XM56_13325 IPR001753 Enoyl-CoA hydratase/isomerase XM56_13325 IPR014748 Enoyl-CoA hydratase, C-terminal XM56_13325 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB XM56_13325 IPR029045 ClpP/crotonase-like domain superfamily XM56_13330 IPR000073 Alpha/beta hydrolase fold-1 XM56_13330 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase XM56_13330 IPR029058 Alpha/Beta hydrolase fold XM56_13335 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding XM56_13335 IPR029035 DHS-like NAD/FAD-binding domain superfamily XM56_13335 IPR032264 Menaquinone biosynthesis protein MenD, middle domain XM56_13335 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase XM56_13335 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain XM56_13335 IPR029061 Thiamin diphosphate-binding fold XM56_13340 IPR005801 ADC synthase XM56_13340 IPR015890 Chorismate-utilising enzyme, C-terminal XM56_13340 IPR004561 Isochorismate synthase XM56_13340 IPR034681 Isochorismate synthase MenF XM56_13345 IPR001207 Transposase, mutator type XM56_13350 IPR010279 Inner membrane protein YqjD/ElaB XM56_13360 IPR010371 Uncharacterised protein family UPF0303 XM56_13360 IPR038084 GlcG-like domain superfamily XM56_13360 IPR005624 Haem-degrading XM56_13365 IPR036259 MFS transporter superfamily XM56_13365 IPR020846 Major facilitator superfamily domain XM56_13365 IPR011701 Major facilitator superfamily XM56_13370 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain XM56_13370 IPR036291 NAD(P)-binding domain superfamily XM56_13370 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain XM56_13380 IPR036291 NAD(P)-binding domain superfamily XM56_13380 IPR020904 Short-chain dehydrogenase/reductase, conserved site XM56_13380 IPR002347 Short-chain dehydrogenase/reductase SDR XM56_13385 IPR031322 Shikimate kinase/gluconokinase XM56_13385 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_13385 IPR006001 Carbohydrate kinase, thermoresistant glucokinase XM56_13395 IPR009476 Protein of unknown function DUF1097 XM56_13405 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit XM56_13405 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 XM56_13410 IPR003918 NADH:ubiquinone oxidoreductase XM56_13410 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit XM56_13410 IPR010227 NADH-quinone oxidoreductase, chain M/4 XM56_13415 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 XM56_13415 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup XM56_13415 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit XM56_13415 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal XM56_13420 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K XM56_13420 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like XM56_13425 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 XM56_13425 IPR042106 NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ XM56_13430 IPR010226 NADH-quinone oxidoreductase, chain I XM56_13430 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site XM56_13430 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain XM56_13435 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site XM56_13435 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H XM56_13440 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding XM56_13440 IPR010228 NADH:ubiquinone oxidoreductase, subunit G XM56_13440 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain XM56_13440 IPR036010 2Fe-2S ferredoxin-like superfamily XM56_13440 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain XM56_13440 IPR009010 Aspartate decarboxylase-like domain superfamily XM56_13440 IPR006656 Molybdopterin oxidoreductase XM56_13440 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site XM56_13440 IPR006657 Molybdopterin dinucleotide-binding domain XM56_13445 IPR011537 NADH ubiquinone oxidoreductase, F subunit XM56_13445 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain XM56_13445 IPR019554 Soluble ligand binding domain XM56_13445 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily XM56_13445 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily XM56_13445 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site XM56_13445 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain XM56_13450 IPR042128 NuoE domain XM56_13450 IPR041921 NADH-quinone oxidoreductase subunit E, N-terminal XM56_13450 IPR036249 Thioredoxin-like superfamily XM56_13450 IPR002023 NADH-quinone oxidoreductase subunit E-like XM56_13455 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H XM56_13455 IPR023062 NADH dehydrogenase, subunit CD XM56_13455 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily XM56_13455 IPR029014 [NiFe]-hydrogenase, large subunit XM56_13455 IPR001135 NADH-quinone oxidoreductase, subunit D XM56_13455 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily XM56_13455 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit XM56_13455 IPR010218 NADH dehydrogenase, subunit C XM56_13455 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site XM56_13460 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit XM56_13460 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit XM56_13465 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily XM56_13465 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid XM56_13465 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 XM56_13470 IPR005119 LysR, substrate-binding XM56_13470 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_13470 IPR000847 Transcription regulator HTH, LysR XM56_13470 IPR036390 Winged helix DNA-binding domain superfamily XM56_13475 IPR015424 Pyridoxal phosphate-dependent transferase XM56_13475 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 XM56_13475 IPR015421 Pyridoxal phosphate-dependent transferase, major domain XM56_13475 IPR004839 Aminotransferase, class I/classII XM56_13480 IPR039356 Metal-dependent nucleoside 5'-monophosphatase XM56_13480 IPR003607 HD/PDEase domain XM56_13480 IPR022971 5'-deoxynucleotidase YfbR XM56_13485 IPR004680 Citrate transporter-like domain XM56_13485 IPR006037 Regulator of K+ conductance, C-terminal XM56_13485 IPR031312 Sodium/sulphate symporter, conserved site XM56_13485 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily XM56_13495 IPR041492 Haloacid dehalogenase-like hydrolase XM56_13495 IPR023198 Phosphoglycolate phosphatase-like, domain 2 XM56_13495 IPR023214 HAD superfamily XM56_13495 IPR006439 HAD hydrolase, subfamily IA XM56_13495 IPR036412 HAD-like superfamily XM56_13500 IPR005587 Uncharacterised protein family UPF0304, YfbU XM56_13500 IPR023146 YfbU, alpha-helical bundle domain superfamily XM56_13500 IPR023145 YfbU, helix-hairpin domain superfamily XM56_13505 IPR007334 Uncharacterised protein family UPF0208 XM56_13510 IPR004372 Acetate/propionate kinase XM56_13510 IPR000890 Aliphatic acid kinase, short-chain XM56_13510 IPR023865 Aliphatic acid kinase, short-chain, conserved site XM56_13515 IPR016475 Phosphate acetyltransferase, bacteria XM56_13515 IPR002505 Phosphate acetyl/butaryl transferase XM56_13515 IPR010766 DRTGG XM56_13515 IPR004614 Phosphate acetyltransferase XM56_13515 IPR042113 Phosphate acetyltransferase, domain 1 XM56_13515 IPR042112 Phosphate acetyltransferase, domain 2 XM56_13515 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily XM56_13515 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_13520 IPR028082 Periplasmic binding protein-like I XM56_13520 IPR010982 Lambda repressor-like, DNA-binding domain superfamily XM56_13520 IPR000843 LacI-type HTH domain XM56_13520 IPR001761 Periplasmic binding protein/LacI sugar binding domain XM56_13525 IPR002178 PTS EIIA type-2 domain XM56_13525 IPR016152 Phosphotransferase/anion transporter XM56_13535 IPR004703 Phosphotransferase system, sugar-specific permease component XM56_13545 IPR000086 NUDIX hydrolase domain XM56_13545 IPR024195 NUDIX hydrolase, YfcD, predicted XM56_13545 IPR015797 NUDIX hydrolase-like domain superfamily XM56_13550 IPR024654 Calcineurin-like phosphoesterase domain, lpxH-type XM56_13550 IPR029052 Metallo-dependent phosphatase-like XM56_13550 IPR020935 Phosphodiesterase YfcE, conserved site XM56_13550 IPR041802 YfcE-like, metallophosphatase domain XM56_13550 IPR000979 Phosphodiesterase MJ0936/Vps29 XM56_13560 IPR013549 Domain of unknown function DUF1731 XM56_13560 IPR036291 NAD(P)-binding domain superfamily XM56_13560 IPR010099 Epimerase family protein SDR39U1 XM56_13560 IPR001509 NAD-dependent epimerase/dehydratase XM56_13570 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_13570 IPR017871 ABC transporter, conserved site XM56_13570 IPR003439 ABC transporter-like XM56_13570 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type XM56_13570 IPR003593 AAA+ ATPase domain XM56_13575 IPR035906 MetI-like superfamily XM56_13575 IPR000515 ABC transporter type 1, transmembrane domain MetI-like XM56_13575 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain XM56_13580 IPR000515 ABC transporter type 1, transmembrane domain MetI-like XM56_13580 IPR030199 Histidine transport system permease protein HisQ XM56_13580 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain XM56_13580 IPR035906 MetI-like superfamily XM56_13585 IPR018313 Solute-binding protein family 3, conserved site XM56_13585 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter XM56_13585 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF XM56_13590 IPR004507 Flavin prenyltransferase UbiX-like XM56_13590 IPR003382 Flavoprotein XM56_13590 IPR036551 Flavin prenyltransferase-like XM56_13595 IPR029055 Nucleophile aminohydrolases, N-terminal XM56_13595 IPR035584 Amidophosphoribosyltransferase, N-terminal XM56_13595 IPR029057 Phosphoribosyltransferase-like XM56_13595 IPR000836 Phosphoribosyltransferase domain XM56_13595 IPR005854 Amidophosphoribosyltransferase XM56_13595 IPR017932 Glutamine amidotransferase type 2 domain XM56_13600 IPR003825 Colicin V production, CvpA XM56_13605 IPR032898 Cell division protein DedD XM56_13605 IPR007730 Sporulation-like domain XM56_13605 IPR036680 Sporulation-like domain superfamily XM56_13610 IPR036565 Mur-like, catalytic domain superfamily XM56_13610 IPR036615 Mur ligase, C-terminal domain superfamily XM56_13610 IPR004101 Mur ligase, C-terminal XM56_13610 IPR013221 Mur ligase, central XM56_13610 IPR018109 Folylpolyglutamate synthetase, conserved site XM56_13610 IPR001645 Folylpolyglutamate synthetase XM56_13615 IPR041010 Acetyl-coA carboxylase zinc finger domain XM56_13615 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal XM56_13615 IPR034733 Acetyl-CoA carboxylase XM56_13615 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit XM56_13615 IPR029045 ClpP/crotonase-like domain superfamily XM56_13620 IPR032816 SNARE associated Golgi protein XM56_13620 IPR032818 DedA family XM56_13625 IPR020103 Pseudouridine synthase, catalytic domain superfamily XM56_13625 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain XM56_13625 IPR001406 Pseudouridine synthase I, TruA XM56_13625 IPR020095 Pseudouridine synthase I, TruA, C-terminal XM56_13630 IPR012280 Semialdehyde dehydrogenase, dimerisation domain XM56_13630 IPR000534 Semialdehyde dehydrogenase, NAD-binding XM56_13630 IPR036291 NAD(P)-binding domain superfamily XM56_13635 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain XM56_13635 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain XM56_13635 IPR036291 NAD(P)-binding domain superfamily XM56_13635 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 XM56_13635 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site XM56_13635 IPR038251 PdxB, dimerisation domain superfamily XM56_13635 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain XM56_13635 IPR020921 Erythronate-4-phosphate dehydrogenase XM56_13645 IPR000620 EamA domain XM56_13650 IPR000620 EamA domain XM56_13655 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 XM56_13655 IPR015424 Pyridoxal phosphate-dependent transferase XM56_13655 IPR004839 Aminotransferase, class I/classII XM56_13655 IPR015421 Pyridoxal phosphate-dependent transferase, major domain XM56_13660 IPR017937 Thioredoxin, conserved site XM56_13660 IPR036249 Thioredoxin-like superfamily XM56_13660 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant XM56_13660 IPR013766 Thioredoxin domain XM56_13670 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily XM56_13670 IPR036249 Thioredoxin-like superfamily XM56_13670 IPR022910 Thiol:disulphide interchange protein DsbD XM56_13670 IPR035671 DsbD gamma XM56_13670 IPR013766 Thioredoxin domain XM56_13670 IPR003834 Cytochrome C biogenesis protein, transmembrane domain XM56_13670 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain XM56_13670 IPR017937 Thioredoxin, conserved site XM56_13680 IPR023597 Flagellar regulator Flk XM56_13685 IPR004680 Citrate transporter-like domain XM56_13690 IPR000560 Histidine phosphatase superfamily, clade-2 XM56_13690 IPR029033 Histidine phosphatase superfamily XM56_13690 IPR033379 Histidine acid phosphatase active site XM56_13695 IPR028082 Periplasmic binding protein-like I XM56_13695 IPR010982 Lambda repressor-like, DNA-binding domain superfamily XM56_13695 IPR000843 LacI-type HTH domain XM56_13695 IPR006377 Catabolite control protein A XM56_13700 IPR013012 Phosphotransferase system, EIIB component, type 3 XM56_13700 IPR003501 Phosphotransferase system, EIIB component, type 2/3 XM56_13700 IPR036095 PTS system IIB component-like superfamily XM56_13705 IPR003352 Phosphotransferase system, EIIC XM56_13705 IPR004501 Phosphotransferase system, EIIC component, type 3 XM56_13705 IPR004796 Phosphotransferase system, cellobiose-type IIC component XM56_13710 IPR017853 Glycoside hydrolase superfamily XM56_13710 IPR018120 Glycoside hydrolase family 1, active site XM56_13710 IPR001360 Glycoside hydrolase family 1 XM56_13715 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit XM56_13715 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily XM56_13725 IPR015942 Asp/Glu/hydantoin racemase XM56_13725 IPR001920 Asp/Glu racemase XM56_13725 IPR018187 Asp/Glu racemase, active site 1 XM56_13725 IPR033134 Asp/Glu racemase, active site 2 XM56_13725 IPR004380 Aspartate racemase XM56_13730 IPR033416 Periplasmic sensor domain CHASE7 XM56_13730 IPR000160 GGDEF domain XM56_13730 IPR029787 Nucleotide cyclase XM56_13735 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain XM56_13735 IPR016039 Thiolase-like XM56_13735 IPR014030 Beta-ketoacyl synthase, N-terminal XM56_13735 IPR014031 Beta-ketoacyl synthase, C-terminal XM56_13735 IPR018201 Beta-ketoacyl synthase, active site XM56_13735 IPR000794 Beta-ketoacyl synthase XM56_13740 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal XM56_13740 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC XM56_13740 IPR036188 FAD/NAD(P)-binding domain superfamily XM56_13740 IPR008471 MnmC-like methyltransferase XM56_13740 IPR006076 FAD dependent oxidoreductase XM56_13745 IPR014987 Uncharacterised protein family YfcL XM56_13750 IPR007411 Elongation factor P hydroxylase XM56_13755 IPR002781 Transmembrane protein TauE-like XM56_13760 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase XM56_13760 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily XM56_13765 IPR000453 Chorismate synthase XM56_13765 IPR035904 Chorismate synthase AroC superfamily XM56_13765 IPR020541 Chorismate synthase, conserved site XM56_13770 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XM56_13770 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase XM56_13770 IPR007848 Methyltransferase small domain XM56_13770 IPR002052 DNA methylase, N-6 adenine-specific, conserved site XM56_13770 IPR004556 Methyltransferase HemK-like XM56_13775 IPR002625 Smr domain XM56_13775 IPR036063 Smr domain superfamily XM56_13775 IPR022990 Uncharacterised protein family UPF0115 XM56_13780 IPR029033 Histidine phosphatase superfamily XM56_13780 IPR004449 Phosphohistidine phosphatase SixA XM56_13780 IPR013078 Histidine phosphatase superfamily, clade-1 XM56_13785 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily XM56_13785 IPR029045 ClpP/crotonase-like domain superfamily XM56_13785 IPR012802 Fatty oxidation complex, alpha subunit FadJ XM56_13785 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site XM56_13785 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal XM56_13785 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding XM56_13785 IPR036291 NAD(P)-binding domain superfamily XM56_13785 IPR001753 Enoyl-CoA hydratase/isomerase XM56_13790 IPR012806 Acetyl-CoA C-acyltransferase FadI XM56_13790 IPR020616 Thiolase, N-terminal XM56_13790 IPR002155 Thiolase XM56_13790 IPR016039 Thiolase-like XM56_13790 IPR020615 Thiolase, acyl-enzyme intermediate active site XM56_13790 IPR020617 Thiolase, C-terminal XM56_13790 IPR020610 Thiolase, active site XM56_13790 IPR020613 Thiolase, conserved site XM56_13795 IPR005272 Conserved hypothetical protein CHP00743 XM56_13795 IPR035571 UPF0234-like, C-terminal XM56_13800 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) XM56_13800 IPR042117 OMPP1/FadL/TodX superfamily XM56_13805 IPR007428 MlaA lipoprotein XM56_13810 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily XM56_13810 IPR005616 CcmH/CycL/Ccl2/NrfF family XM56_13810 IPR013026 Tetratricopeptide repeat-containing domain XM56_13810 IPR011990 Tetratricopeptide-like helical domain superfamily XM56_13810 IPR019734 Tetratricopeptide repeat XM56_13815 IPR011990 Tetratricopeptide-like helical domain superfamily XM56_13815 IPR005616 CcmH/CycL/Ccl2/NrfF family XM56_13815 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily XM56_13815 IPR019734 Tetratricopeptide repeat XM56_13815 IPR017560 Cytochrome c-type biogenesis protein CcmI XM56_13815 IPR013026 Tetratricopeptide repeat-containing domain XM56_13820 IPR036249 Thioredoxin-like superfamily XM56_13820 IPR013740 Redoxin XM56_13820 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE XM56_13820 IPR013766 Thioredoxin domain XM56_13820 IPR017937 Thioredoxin, conserved site XM56_13825 IPR003567 Cytochrome c-type biogenesis protein XM56_13825 IPR002541 Cytochrome c assembly protein XM56_13825 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal XM56_13825 IPR003568 Cytochrome c-type biogenesis protein CcmF XM56_13830 IPR036127 CcmE-like superfamily XM56_13830 IPR004329 CcmE/CycJ protein XM56_13835 IPR007078 Haem exporter protein D (CcmD) XM56_13840 IPR002541 Cytochrome c assembly protein XM56_13840 IPR003557 Cytochrome c-type biogenesis protein CcmC XM56_13845 IPR003544 Cytochrome c-type biogenesis protein CcmB XM56_13845 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria XM56_13850 IPR003593 AAA+ ATPase domain XM56_13850 IPR003439 ABC transporter-like XM56_13850 IPR017871 ABC transporter, conserved site XM56_13850 IPR005895 ABC transporter, haem export, CcmA XM56_13850 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_13860 IPR023271 Aquaporin-like XM56_13860 IPR000292 Formate/nitrite transporter XM56_13870 IPR004107 Integrase, SAM-like, N-terminal XM56_13870 IPR011010 DNA breaking-rejoining enzyme, catalytic core XM56_13870 IPR013762 Integrase-like, catalytic domain superfamily XM56_13870 IPR038488 Integrase, DNA-binding domain superfamily XM56_13870 IPR002104 Integrase, catalytic domain XM56_13870 IPR025166 Integrase, DNA-binding domain XM56_13870 IPR010998 Integrase/recombinase, N-terminal XM56_13935 IPR004624 PhnA protein XM56_13935 IPR013987 PhnA protein, N-terminal XM56_13935 IPR013988 PhnA protein, C-terminal XM56_13940 IPR036390 Winged helix DNA-binding domain superfamily XM56_13940 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_13940 IPR005149 Transcription regulator PadR, N-terminal XM56_13950 IPR018120 Glycoside hydrolase family 1, active site XM56_13950 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site XM56_13950 IPR017853 Glycoside hydrolase superfamily XM56_13950 IPR001360 Glycoside hydrolase family 1 XM56_13955 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site XM56_13955 IPR003352 Phosphotransferase system, EIIC XM56_13955 IPR036878 Glucose permease domain IIB XM56_13955 IPR013013 Phosphotransferase system, EIIC component, type 1 XM56_13955 IPR001996 Phosphotransferase system, IIB component, type 1 XM56_13955 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component XM56_13960 IPR010982 Lambda repressor-like, DNA-binding domain superfamily XM56_13960 IPR000843 LacI-type HTH domain XM56_13960 IPR028082 Periplasmic binding protein-like I XM56_13965 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily XM56_13965 IPR007372 Lipid/polyisoprenoid-binding, YceI-like XM56_13965 IPR023480 Uncharacterised protein family UPF0312/YceI XM56_13970 IPR016174 Di-haem cytochrome, transmembrane XM56_13970 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase XM56_13975 IPR029058 Alpha/Beta hydrolase fold XM56_13975 IPR036514 SGNH hydrolase superfamily XM56_13975 IPR013094 Alpha/beta hydrolase fold-3 XM56_13975 IPR013830 SGNH hydrolase-type esterase domain XM56_13995 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_13995 IPR003439 ABC transporter-like XM56_13995 IPR017871 ABC transporter, conserved site XM56_13995 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl XM56_13995 IPR003593 AAA+ ATPase domain XM56_14000 IPR003453 ABC transport permease subunit MlaE, Proteobacteria XM56_14000 IPR030802 ABC transporter permease MalE XM56_14005 IPR011701 Major facilitator superfamily XM56_14005 IPR036259 MFS transporter superfamily XM56_14005 IPR020846 Major facilitator superfamily domain XM56_14025 IPR013108 Amidohydrolase 3 XM56_14025 IPR011059 Metal-dependent hydrolase, composite domain superfamily XM56_14025 IPR032466 Metal-dependent hydrolase XM56_14025 IPR033932 YtcJ like XM56_14030 IPR004841 Amino acid permease/ SLC12A domain XM56_14035 IPR031304 Transglycosylase SLT domain 2 XM56_14035 IPR011757 Lytic transglycosylase MltB XM56_14035 IPR023346 Lysozyme-like domain superfamily XM56_14040 IPR006061 Solute-binding family 1, conserved site XM56_14040 IPR026045 Ferric binding protein XM56_14045 IPR000515 ABC transporter type 1, transmembrane domain MetI-like XM56_14045 IPR035906 MetI-like superfamily XM56_14050 IPR003439 ABC transporter-like XM56_14050 IPR003593 AAA+ ATPase domain XM56_14050 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_14050 IPR030287 Fe(3+) ions import ATP-binding protein FbpC XM56_14050 IPR015853 ABC transporter, ferric cation import, FbpC XM56_14050 IPR017871 ABC transporter, conserved site XM56_14055 IPR004778 Homoserine/Threonine efflux protein XM56_14055 IPR001123 Amino acid exporter protein, LeuE-type XM56_14065 IPR035069 TTHA1013/TTHA0281-like XM56_14070 IPR016174 Di-haem cytochrome, transmembrane XM56_14070 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase XM56_14075 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 XM56_14075 IPR015424 Pyridoxal phosphate-dependent transferase XM56_14075 IPR015421 Pyridoxal phosphate-dependent transferase, major domain XM56_14075 IPR004839 Aminotransferase, class I/classII XM56_14085 IPR010856 Protein of unknown function DUF1479 XM56_14085 IPR027443 Isopenicillin N synthase-like XM56_14090 IPR010559 Signal transduction histidine kinase, internal region XM56_14090 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XM56_14090 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region XM56_14090 IPR029016 GAF-like domain superfamily XM56_14090 IPR003594 Histidine kinase/HSP90-like ATPase XM56_14095 IPR007492 LytTR DNA-binding domain XM56_14095 IPR011006 CheY-like superfamily XM56_14095 IPR001789 Signal transduction response regulator, receiver domain XM56_14100 IPR020846 Major facilitator superfamily domain XM56_14100 IPR036259 MFS transporter superfamily XM56_14100 IPR004741 Oxalate/formate antiporter family transporter XM56_14100 IPR011701 Major facilitator superfamily XM56_14110 IPR003836 Glucokinase XM56_14120 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_14120 IPR005119 LysR, substrate-binding XM56_14120 IPR000847 Transcription regulator HTH, LysR XM56_14120 IPR036390 Winged helix DNA-binding domain superfamily XM56_14125 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding XM56_14125 IPR029035 DHS-like NAD/FAD-binding domain superfamily XM56_14125 IPR012000 Thiamine pyrophosphate enzyme, central domain XM56_14125 IPR000399 TPP-binding enzyme, conserved site XM56_14125 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain XM56_14125 IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme XM56_14125 IPR029061 Thiamin diphosphate-binding fold XM56_14125 IPR017764 Indole-3-pyruvate decarboxylase, Enterobacteriaceae XM56_14130 IPR023210 NADP-dependent oxidoreductase domain XM56_14130 IPR036812 NADP-dependent oxidoreductase domain superfamily XM56_14140 IPR001046 NRAMP family XM56_14145 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain XM56_14145 IPR002668 Concentrative nucleoside transporter N-terminal domain XM56_14145 IPR011657 Concentrative nucleoside transporter C-terminal domain XM56_14145 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial XM56_14145 IPR008276 Concentrative nucleoside transporter XM56_14160 IPR000924 Glutamyl/glutaminyl-tRNA synthetase XM56_14160 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site XM56_14160 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain XM56_14160 IPR033910 Glutamyl-tRNA synthetase XM56_14160 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XM56_14160 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding XM56_14160 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial XM56_14160 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 XM56_14190 IPR024530 Putative quorum-sensing-regulated virulence factor XM56_14195 IPR041663 DisA/LigA, helix-hairpin-helix motif XM56_14195 IPR036420 BRCT domain superfamily XM56_14195 IPR001357 BRCT domain XM56_14195 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 XM56_14195 IPR010994 RuvA domain 2-like XM56_14195 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type XM56_14195 IPR004150 NAD-dependent DNA ligase, OB-fold XM56_14195 IPR013839 NAD-dependent DNA ligase, adenylation XM56_14195 IPR001679 NAD-dependent DNA ligase XM56_14195 IPR018239 NAD-dependent DNA ligase, active site XM56_14195 IPR033136 NAD-dependent DNA ligase, conserved site XM56_14195 IPR013840 NAD-dependent DNA ligase, N-terminal XM56_14195 IPR012340 Nucleic acid-binding, OB-fold XM56_14200 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily XM56_14200 IPR011919 Cell division protein ZipA XM56_14200 IPR007449 ZipA, C-terminal FtsZ-binding domain XM56_14205 IPR022985 Sulfate transporter CysZ XM56_14210 IPR005856 Cysteine synthase XM56_14210 IPR005859 Cysteine synthase CysK XM56_14210 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site XM56_14210 IPR001926 Pyridoxal-phosphate dependent enzyme XM56_14210 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme XM56_14215 IPR000032 Phosphocarrier protein HPr-like XM56_14215 IPR002114 Phosphotransferase system, HPr serine phosphorylation site XM56_14215 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site XM56_14215 IPR035895 HPr-like superfamily XM56_14220 IPR040442 Pyruvate kinase-like domain superfamily XM56_14220 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily XM56_14220 IPR024692 Phosphotransferase system, enzyme I XM56_14220 IPR008731 Phosphotransferase system, enzyme I N-terminal XM56_14220 IPR036637 Phosphohistidine domain superfamily XM56_14220 IPR023151 PEP-utilising enzyme, conserved site XM56_14220 IPR000121 PEP-utilising enzyme, C-terminal XM56_14220 IPR036618 PtsI, HPr-binding domain superfamily XM56_14220 IPR018274 PEP-utilising enzyme, active site XM56_14220 IPR008279 PEP-utilising enzyme, mobile domain XM56_14220 IPR006318 Phosphotransferase system, enzyme I-like XM56_14225 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 XM56_14225 IPR011055 Duplicated hybrid motif XM56_14230 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily XM56_14230 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain XM56_14230 IPR005467 Histidine kinase domain XM56_14230 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XM56_14230 IPR003594 Histidine kinase/HSP90-like ATPase XM56_14230 IPR003660 HAMP domain XM56_14230 IPR038515 CpxA, periplasmic domain superfamily XM56_14230 IPR004358 Signal transduction histidine kinase-related protein, C-terminal XM56_14230 IPR032404 Two-component sensor protein CpxA, periplasmic domain XM56_14235 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_14235 IPR011006 CheY-like superfamily XM56_14235 IPR001867 OmpR/PhoB-type DNA-binding domain XM56_14235 IPR001789 Signal transduction response regulator, receiver domain XM56_14235 IPR039420 Transcriptional regulatory protein WalR-like XM56_14240 IPR006143 RND efflux pump, membrane fusion protein XM56_14240 IPR030190 Macrolide export protein MacA XM56_14240 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain XM56_14245 IPR025857 MacB-like periplasmic core domain XM56_14245 IPR003593 AAA+ ATPase domain XM56_14245 IPR003838 ABC transporter permease protein domain XM56_14245 IPR017871 ABC transporter, conserved site XM56_14245 IPR017911 ABC transporter, macrolide export, ATP-binding domain XM56_14245 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_14245 IPR003439 ABC transporter-like XM56_14250 IPR001926 Pyridoxal-phosphate dependent enzyme XM56_14250 IPR005858 Cysteine synthase CysM XM56_14250 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme XM56_14250 IPR005856 Cysteine synthase XM56_14250 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site XM56_14255 IPR003593 AAA+ ATPase domain XM56_14255 IPR005666 Sulphate transport system permease protein 1 XM56_14255 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_14255 IPR008995 Molybdate/tungstate binding, C-terminal XM56_14255 IPR017871 ABC transporter, conserved site XM56_14255 IPR003439 ABC transporter-like XM56_14255 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal XM56_14260 IPR000515 ABC transporter type 1, transmembrane domain MetI-like XM56_14260 IPR035906 MetI-like superfamily XM56_14260 IPR005667 Sulphate ABC transporter permease protein 2 XM56_14260 IPR011866 Sulphate ABC transporter, permease protein CysW XM56_14265 IPR011865 Sulphate ABC transporter, permease protein CysT XM56_14265 IPR000515 ABC transporter type 1, transmembrane domain MetI-like XM56_14265 IPR035906 MetI-like superfamily XM56_14265 IPR005667 Sulphate ABC transporter permease protein 2 XM56_14270 IPR000957 Sulphate/thiosulphate-binding, conserved site XM56_14270 IPR034408 Sulphate/thiosulphate-binding site XM56_14270 IPR005669 Thiosulphate/Sulfate-binding protein XM56_14275 IPR011701 Major facilitator superfamily XM56_14275 IPR004742 Sialic acid transporter XM56_14275 IPR036259 MFS transporter superfamily XM56_14275 IPR020846 Major facilitator superfamily domain XM56_14280 IPR035472 RpiR-like, SIS domain XM56_14280 IPR000281 Helix-turn-helix protein RpiR XM56_14280 IPR009057 Homeobox-like domain superfamily XM56_14280 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_14280 IPR001347 Sugar isomerase (SIS) XM56_14285 IPR004375 YhcH/YjgK/YiaL family XM56_14285 IPR037012 YhcH/YjgK/YiaL superfamily XM56_14290 IPR000600 ROK family XM56_14290 IPR023945 N-acetylmannosamine kinase, bacterial XM56_14295 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase XM56_14295 IPR011060 Ribulose-phosphate binding barrel XM56_14295 IPR013785 Aldolase-type TIM barrel XM56_14300 IPR013785 Aldolase-type TIM barrel XM56_14300 IPR020625 Schiff base-forming aldolase, active site XM56_14300 IPR002220 DapA-like XM56_14300 IPR005264 N-acetylneuraminate lyase XM56_14310 IPR006314 Dyp-type peroxidase XM56_14310 IPR011008 Dimeric alpha-beta barrel XM56_14315 IPR038714 YfeY-like superfamily XM56_14315 IPR010938 Protein of unknown function DUF1131 XM56_14320 IPR036700 Bacterial OB-fold superfamily XM56_14320 IPR005220 Bacterial OB-fold XM56_14320 IPR016052 Bacteriophage 933W, L0136 XM56_14325 IPR000182 GNAT domain XM56_14325 IPR023072 Acetyltransferase, YpeA XM56_14325 IPR016181 Acyl-CoA N-acyltransferase XM56_14330 IPR001260 Coproporphyrinogen III oxidase, aerobic XM56_14330 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily XM56_14330 IPR018375 Coproporphyrinogen III oxidase, conserved site XM56_14335 IPR003791 Protein of unknown function UPF0178 XM56_14340 IPR000847 Transcription regulator HTH, LysR XM56_14340 IPR036390 Winged helix DNA-binding domain superfamily XM56_14340 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_14340 IPR037417 HTH-type transcriptional regulator SyrM, PBP2 domain XM56_14340 IPR005119 LysR, substrate-binding XM56_14350 IPR042112 Phosphate acetyltransferase, domain 2 XM56_14350 IPR042113 Phosphate acetyltransferase, domain 1 XM56_14350 IPR015884 Malic enzyme, conserved site XM56_14350 IPR036291 NAD(P)-binding domain superfamily XM56_14350 IPR012188 NAD(P)-dependent malic enzyme XM56_14350 IPR012301 Malic enzyme, N-terminal domain XM56_14350 IPR037062 Malic enzyme, N-terminal domain superfamily XM56_14350 IPR002505 Phosphate acetyl/butaryl transferase XM56_14350 IPR012302 Malic enzyme, NAD-binding XM56_14355 IPR004385 Nucleoside diphosphate pyrophosphatase XM56_14355 IPR015797 NUDIX hydrolase-like domain superfamily XM56_14355 IPR000086 NUDIX hydrolase domain XM56_14360 IPR024717 Denitrification system component NapC/NirT/NrfH XM56_14360 IPR005126 NapC/NirT cytochrome c, N-terminal XM56_14360 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT XM56_14360 IPR036280 Multiheme cytochrome superfamily XM56_14360 IPR011031 Multihaem cytochrome XM56_14360 IPR038266 NapC/NirT cytochrome c superfamily XM56_14365 IPR036280 Multiheme cytochrome superfamily XM56_14365 IPR005591 Nitrate reductase cytochrome c-type subunit NapB XM56_14365 IPR011031 Multihaem cytochrome XM56_14370 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain XM56_14370 IPR006656 Molybdopterin oxidoreductase XM56_14370 IPR006657 Molybdopterin dinucleotide-binding domain XM56_14370 IPR010051 Periplasmic nitrate reductase, large subunit XM56_14370 IPR006311 Twin-arginine translocation pathway, signal sequence XM56_14370 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal XM56_14370 IPR041957 Nitrate reductase NapA-like, molybdopterin-binding domain XM56_14370 IPR009010 Aspartate decarboxylase-like domain superfamily XM56_14370 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site XM56_14375 IPR005623 Chaperone NapD, nitrate reductase assembly XM56_14385 IPR011006 CheY-like superfamily XM56_14385 IPR001789 Signal transduction response regulator, receiver domain XM56_14385 IPR016032 Signal transduction response regulator, C-terminal effector XM56_14385 IPR000792 Transcription regulator LuxR, C-terminal XM56_14395 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 XM56_14395 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XM56_14395 IPR001036 Acriflavin resistance protein XM56_14410 IPR006660 Arsenate reductase-like XM56_14410 IPR036249 Thioredoxin-like superfamily XM56_14410 IPR006504 Transcriptional regulator Spx/MgsR XM56_14415 IPR002933 Peptidase M20 XM56_14415 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site XM56_14415 IPR036264 Bacterial exopeptidase dimerisation domain XM56_14415 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria XM56_14415 IPR011650 Peptidase M20, dimerisation domain XM56_14420 IPR003709 Peptidase M15B XM56_14420 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily XM56_14425 IPR020910 Uncharacterised protein family UPF0370 XM56_14435 IPR000758 Virulence-related outer membrane protein XM56_14435 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel XM56_14435 IPR027385 Outer membrane protein beta-barrel domain XM56_14450 IPR003346 Transposase, IS116/IS110/IS902 XM56_14450 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal XM56_14455 IPR004929 Spanin, inner membrane subunit XM56_14465 IPR003140 Phospholipase/carboxylesterase/thioesterase XM56_14465 IPR029058 Alpha/Beta hydrolase fold XM56_14480 IPR000182 GNAT domain XM56_14480 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_14480 IPR032672 TmcA/NAT10/Kre33 XM56_14480 IPR038321 TmcA, C-terminal domain superfamily XM56_14480 IPR033442 tRNA(Met) cytidine acetyltransferase TmcA, tRNA-binding domain XM56_14480 IPR016181 Acyl-CoA N-acyltransferase XM56_14480 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA XM56_14480 IPR007807 Helicase domain XM56_14485 IPR007382 Uncharacterised protein family UPF0756, transmembrame XM56_14490 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative XM56_14495 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase XM56_14495 IPR028923 SAICAR synthetase/ADE2, N-terminal XM56_14495 IPR018236 SAICAR synthetase, conserved site XM56_14495 IPR033934 Bacterial and archaeal 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide synthase XM56_14500 IPR042268 Outer membrane protein assembly factor BamC, C-terminal XM56_14500 IPR010653 NlpB/DapX lipoprotein XM56_14500 IPR014524 Outer membrane protein assembly factor BamC XM56_14505 IPR020624 Schiff base-forming aldolase, conserved site XM56_14505 IPR020625 Schiff base-forming aldolase, active site XM56_14505 IPR002220 DapA-like XM56_14505 IPR013785 Aldolase-type TIM barrel XM56_14505 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA XM56_14510 IPR016867 Glycine cleavage system transcriptional repressor XM56_14510 IPR002912 ACT domain XM56_14515 IPR024706 Peroxiredoxin, AhpC-type XM56_14515 IPR013766 Thioredoxin domain XM56_14515 IPR036249 Thioredoxin-like superfamily XM56_14515 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant XM56_14520 IPR002549 Transmembrane protein TqsA-like XM56_14525 IPR001915 Peptidase M48 XM56_14525 IPR030873 Beta-barrel assembly-enhancing protease XM56_14525 IPR011716 Tetratricopeptide TPR-3 XM56_14525 IPR011990 Tetratricopeptide-like helical domain superfamily XM56_14530 IPR006660 Arsenate reductase-like XM56_14530 IPR006659 Arsenate reductase XM56_14530 IPR036249 Thioredoxin-like superfamily XM56_14535 IPR022864 DnaA regulatory inactivator Hda, Enterobacteriaceae XM56_14535 IPR017788 DnaA regulatory inactivator Hda XM56_14535 IPR013317 Chromosomal replication initiator protein DnaA XM56_14535 IPR020591 Chromosomal replication control, initiator DnaA-like XM56_14535 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_14540 IPR029935 Uracil permease XM56_14540 IPR006042 Xanthine/uracil permease XM56_14540 IPR006043 Xanthine/uracil/vitamin C permease XM56_14545 IPR000836 Phosphoribosyltransferase domain XM56_14545 IPR005765 Uracil phosphoribosyl transferase XM56_14545 IPR034332 Uracil phosphoribosyltransferase, bacterial-type XM56_14545 IPR029057 Phosphoribosyltransferase-like XM56_14550 IPR036921 PurM-like, N-terminal domain superfamily XM56_14550 IPR016188 PurM-like, N-terminal domain XM56_14550 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase XM56_14550 IPR010918 PurM-like, C-terminal domain XM56_14550 IPR036676 PurM-like, C-terminal domain superfamily XM56_14555 IPR004607 Phosphoribosylglycinamide formyltransferase XM56_14555 IPR036477 Formyl transferase, N-terminal domain superfamily XM56_14555 IPR001555 Phosphoribosylglycinamide formyltransferase, active site XM56_14555 IPR002376 Formyl transferase, N-terminal XM56_14560 IPR016181 Acyl-CoA N-acyltransferase XM56_14560 IPR000182 GNAT domain XM56_14570 IPR005670 Phosphate transport system permease protein 1 XM56_14570 IPR003593 AAA+ ATPase domain XM56_14570 IPR003439 ABC transporter-like XM56_14570 IPR017871 ABC transporter, conserved site XM56_14570 IPR015850 ABC transporter, phosphate import, PstB XM56_14570 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_14575 IPR035906 MetI-like superfamily XM56_14575 IPR005672 Phosphate transport system permease protein PstA XM56_14575 IPR000515 ABC transporter type 1, transmembrane domain MetI-like XM56_14580 IPR011864 Phosphate ABC transporter, permease protein PstC XM56_14580 IPR000515 ABC transporter type 1, transmembrane domain MetI-like XM56_14580 IPR035906 MetI-like superfamily XM56_14585 IPR036832 Polyphosphate kinase N-terminal domain superfamily XM56_14585 IPR025200 Polyphosphate kinase C-terminal domain 2 XM56_14585 IPR024953 Polyphosphate kinase middle domain XM56_14585 IPR041108 Polyphosphate kinase, C-terminal domain 1 XM56_14585 IPR003414 Polyphosphate kinase XM56_14585 IPR001736 Phospholipase D/Transphosphatidylase XM56_14585 IPR025198 Polyphosphate kinase N-terminal domain XM56_14585 IPR036830 Polyphosphate kinase middle domain superfamily XM56_14590 IPR022371 Exopolyphosphatase XM56_14590 IPR030673 Pyrophosphatase, GppA/Ppx-type XM56_14590 IPR003695 Ppx/GppA phosphatase XM56_14600 IPR006668 Magnesium transporter, MgtE intracellular domain XM56_14600 IPR038076 MgtE, N-terminal domain superfamily XM56_14600 IPR038048 Magnesium transporter MgtE, transmembrane domain XM56_14600 IPR006669 Magnesium transporter MgtE XM56_14600 IPR006667 SLC41 divalent cation transporters, integral membrane domain XM56_14600 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily XM56_14600 IPR000644 CBS domain XM56_14605 IPR007895 MASE1 XM56_14605 IPR001633 EAL domain XM56_14605 IPR029787 Nucleotide cyclase XM56_14605 IPR000160 GGDEF domain XM56_14605 IPR001610 PAC motif XM56_14605 IPR000014 PAS domain XM56_14605 IPR000700 PAS-associated, C-terminal XM56_14605 IPR035965 PAS domain superfamily XM56_14605 IPR013656 PAS fold-4 XM56_14605 IPR013655 PAS fold-3 XM56_14605 IPR035919 EAL domain superfamily XM56_14610 IPR042054 YegD-like XM56_14610 IPR013126 Heat shock protein 70 family XM56_14610 IPR018181 Heat shock protein 70, conserved site XM56_14615 IPR006143 RND efflux pump, membrane fusion protein XM56_14615 IPR022824 Multidrug resistance protein MdtA XM56_14615 IPR039562 Membrane fusion protein, biotin-lipoyl like domain XM56_14620 IPR022831 Multidrug resistance protein MdtB XM56_14620 IPR001036 Acriflavin resistance protein XM56_14620 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XM56_14625 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XM56_14625 IPR001036 Acriflavin resistance protein XM56_14625 IPR023931 Multidrug resistance protein MdtC XM56_14630 IPR023721 Multidrug resistance protein MdtD XM56_14630 IPR036259 MFS transporter superfamily XM56_14630 IPR020846 Major facilitator superfamily domain XM56_14630 IPR011701 Major facilitator superfamily XM56_14635 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain XM56_14635 IPR005467 Histidine kinase domain XM56_14635 IPR004358 Signal transduction histidine kinase-related protein, C-terminal XM56_14635 IPR003660 HAMP domain XM56_14635 IPR003594 Histidine kinase/HSP90-like ATPase XM56_14635 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily XM56_14635 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XM56_14640 IPR016032 Signal transduction response regulator, C-terminal effector XM56_14640 IPR011006 CheY-like superfamily XM56_14640 IPR001867 OmpR/PhoB-type DNA-binding domain XM56_14640 IPR001789 Signal transduction response regulator, receiver domain XM56_14640 IPR039420 Transcriptional regulatory protein WalR-like XM56_14640 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_14645 IPR010879 Domain of unknown function DUF1508 XM56_14645 IPR036913 YegP-like superfamily XM56_14655 IPR022433 Lipid kinase YegS XM56_14655 IPR005218 Diacylglycerol/lipid kinase XM56_14655 IPR001206 Diacylglycerol kinase, catalytic domain XM56_14655 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily XM56_14655 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal XM56_14660 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor XM56_14665 IPR004702 Phosphotransferease, sorbitol phosphotransferase enzyme II XM56_14665 IPR011618 Sorbitol phosphotransferase enzyme II, N-terminal XM56_14665 IPR011638 Sorbitol phosphotransferase enzyme II, C-terminal XM56_14670 IPR036665 Phosphotransferase system, glucitol/sorbitol-specific IIA component superfamily XM56_14670 IPR018454 Phosphotransferase system, glucitol/sorbitol-specific IIA component, subgroup XM56_14670 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component XM56_14675 IPR036291 NAD(P)-binding domain superfamily XM56_14675 IPR020904 Short-chain dehydrogenase/reductase, conserved site XM56_14675 IPR002347 Short-chain dehydrogenase/reductase SDR XM56_14680 IPR009693 Glucitol operon activator XM56_14685 IPR037171 NagB/RpiA transferase-like XM56_14685 IPR018356 Transcription regulator, HTH DeoR-type, conserved site XM56_14685 IPR036390 Winged helix DNA-binding domain superfamily XM56_14685 IPR014036 DeoR C-terminal sensor domain XM56_14685 IPR001034 DeoR-type HTH domain XM56_14685 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_14690 IPR000644 CBS domain XM56_14690 IPR001347 Sugar isomerase (SIS) XM56_14690 IPR035474 KpsF-like, SIS domain XM56_14690 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type XM56_14695 IPR014453 Inhibitor of vertebrate lysozyme XM56_14695 IPR036501 Inhibitor of vertebrate lysozyme superfamily XM56_14705 IPR029056 Ribokinase-like XM56_14705 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase XM56_14705 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase XM56_14720 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit XM56_14720 IPR008168 Cytochrome c, class IC XM56_14720 IPR036909 Cytochrome c-like domain superfamily XM56_14720 IPR009056 Cytochrome c-like domain XM56_14725 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal XM56_14725 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal XM56_14725 IPR036188 FAD/NAD(P)-binding domain superfamily XM56_14740 IPR029062 Class I glutamine amidotransferase-like XM56_14740 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XM56_14740 IPR025777 GMP synthetase ATP pyrophosphatase domain XM56_14740 IPR022955 GMP synthase XM56_14740 IPR004739 GMP synthase, glutamine amidotransferase XM56_14740 IPR001674 GMP synthase, C-terminal XM56_14740 IPR017926 Glutamine amidotransferase XM56_14740 IPR022310 NAD/GMP synthase XM56_14745 IPR005990 Inosine-5'-monophosphate dehydrogenase XM56_14745 IPR015875 IMP dehydrogenase / GMP reductase, conserved site XM56_14745 IPR001093 IMP dehydrogenase/GMP reductase XM56_14745 IPR013785 Aldolase-type TIM barrel XM56_14745 IPR000644 CBS domain XM56_14750 IPR003753 Exonuclease VII, large subunit XM56_14750 IPR020579 Exonuclease VII, large subunit, C-terminal XM56_14750 IPR025824 OB-fold nucleic acid binding domain XM56_14755 IPR010807 Protein of unknown function DUF1407 XM56_14755 IPR029037 YfgJ-like XM56_14770 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_14770 IPR015946 K homology domain-like, alpha/beta XM56_14770 IPR005225 Small GTP-binding protein domain XM56_14770 IPR032859 GTPase Der, C-terminal KH-domain-like XM56_14770 IPR016484 GTP-binding protein EngA XM56_14770 IPR031166 EngA-type guanine nucleotide-binding (G) domain XM56_14770 IPR006073 GTP binding domain XM56_14780 IPR015943 WD40/YVTN repeat-like-containing domain superfamily XM56_14780 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily XM56_14780 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat XM56_14780 IPR017687 Outer membrane protein assembly factor BamB XM56_14780 IPR002372 Pyrrolo-quinoline quinone repeat XM56_14785 IPR011990 Tetratricopeptide-like helical domain superfamily XM56_14785 IPR018704 Tetratricopeptide repeat-like domain XM56_14785 IPR026039 Uncharacterised protein family UPF0070 XM56_14790 IPR004154 Anticodon-binding XM56_14790 IPR033656 Histidyl-anticodon-binding XM56_14790 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit XM56_14790 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain XM56_14790 IPR015807 Histidine-tRNA ligase XM56_14790 IPR036621 Anticodon-binding domain superfamily XM56_14790 IPR006195 Aminoacyl-tRNA synthetase, class II XM56_14795 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type XM56_14795 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial XM56_14795 IPR011005 Dihydropteroate synthase-like XM56_14800 IPR010982 Lambda repressor-like, DNA-binding domain superfamily XM56_14800 IPR023690 Cytoskeleton protein RodZ XM56_14800 IPR001387 Cro/C1-type helix-turn-helix domain XM56_14800 IPR025194 Domain of unknown function DUF4115 XM56_14810 IPR040072 Methyltransferase (Class A) XM56_14810 IPR027492 Dual-specificity RNA methyltransferase RlmN XM56_14810 IPR007197 Radical SAM XM56_14810 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr XM56_14810 IPR013785 Aldolase-type TIM barrel XM56_14815 IPR036850 Nucleoside diphosphate kinase-like domain superfamily XM56_14815 IPR023005 Nucleoside diphosphate kinase, active site XM56_14815 IPR034907 Nucleoside diphosphate kinase-like domain XM56_14815 IPR001564 Nucleoside diphosphate kinase XM56_14825 IPR001460 Penicillin-binding protein, transpeptidase XM56_14825 IPR012338 Beta-lactamase/transpeptidase-like XM56_14825 IPR001264 Glycosyl transferase, family 51 XM56_14825 IPR023346 Lysozyme-like domain superfamily XM56_14825 IPR011815 Penicillin-binding protein 1C XM56_14825 IPR009647 Penicillin-binding, C-terminal XM56_14825 IPR036950 Penicillin binding protein transglycosylase domain XM56_14830 IPR002890 Macroglobulin domain XM56_14830 IPR001599 Alpha-2-macroglobulin XM56_14830 IPR041246 Bacterial alpha-2-macroglobulin MG10 domain XM56_14830 IPR040639 Alpha-2-macroglobulin, MG1 domain XM56_14830 IPR041203 Bacterial Alpha-2-macroglobulin, MG5 domain XM56_14830 IPR011625 Alpha-2-macroglobulin, bait region domain XM56_14830 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid XM56_14830 IPR011626 Alpha-macroglobulin-like, TED domain XM56_14830 IPR026284 Alpha-2-macroglobulin, bacteria XM56_14830 IPR041462 Bacterial Alpha-2-macroglobulin, MG6 domain XM56_14830 IPR021868 Alpha-2-macroglobulin MG3 domain XM56_14835 IPR036709 Autotransporter beta-domain superfamily XM56_14835 IPR005546 Autotransporter beta-domain XM56_14835 IPR006315 Outer membrane autotransporter barrel XM56_14835 IPR012332 P22 tailspike-like, C-terminal domain superfamily XM56_14835 IPR011050 Pectin lyase fold/virulence factor XM56_14835 IPR004899 Pertactin, central region XM56_14835 IPR003991 Pertactin virulence factor family XM56_14835 IPR030930 Adhesin of bacterial autotransporter system XM56_14840 IPR027945 SseB protein, C-terminal XM56_14840 IPR009839 SseB protein N-terminal domain XM56_14845 IPR001346 Interferon regulatory factor DNA-binding domain XM56_14845 IPR008330 Peptidase M17, peptidase B XM56_14845 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal XM56_14845 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B XM56_14850 IPR007479 ISC system FeS cluster assembly, IscX XM56_14850 IPR036762 IscX-like superfamily XM56_14855 IPR036010 2Fe-2S ferredoxin-like superfamily XM56_14855 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain XM56_14855 IPR001055 Adrenodoxin XM56_14855 IPR018298 Adrenodoxin, iron-sulphur binding site XM56_14855 IPR012675 Beta-grasp domain superfamily XM56_14855 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria XM56_14860 IPR042039 HscA chaperone, nucleotide-binding domain XM56_14860 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily XM56_14860 IPR010236 ISC system FeS cluster assembly, HscA chaperone XM56_14860 IPR018181 Heat shock protein 70, conserved site XM56_14860 IPR013126 Heat shock protein 70 family XM56_14860 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily XM56_14865 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain XM56_14865 IPR036869 Chaperone J-domain superfamily XM56_14865 IPR036386 HscB, C-terminal domain superfamily XM56_14865 IPR004640 Co-chaperone Hsc20 XM56_14865 IPR001623 DnaJ domain XM56_14870 IPR016092 FeS cluster insertion protein XM56_14870 IPR035903 HesB-like domain superfamily XM56_14870 IPR017870 FeS cluster insertion, C-terminal, conserved site XM56_14870 IPR011302 Iron-binding protein IscA, proteobacteria XM56_14870 IPR000361 FeS cluster biogenesis XM56_14875 IPR011339 ISC system FeS cluster assembly, IscU scaffold XM56_14875 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal XM56_14880 IPR015424 Pyridoxal phosphate-dependent transferase XM56_14880 IPR015421 Pyridoxal phosphate-dependent transferase, major domain XM56_14880 IPR016454 Cysteine desulfurase XM56_14880 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 XM56_14880 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site XM56_14880 IPR000192 Aminotransferase class V domain XM56_14880 IPR010240 Cysteine desulfurase IscS XM56_14885 IPR010242 Transcription factor HTH, IscR XM56_14885 IPR030489 Transcription regulator Rrf2-type, conserved site XM56_14885 IPR036390 Winged helix DNA-binding domain superfamily XM56_14885 IPR000944 Transcription regulator Rrf2-type XM56_14885 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_14890 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal XM56_14890 IPR001537 tRNA/rRNA methyltransferase, SpoU type XM56_14890 IPR004384 RNA methyltransferase TrmJ/LasT XM56_14890 IPR029028 Alpha/beta knot methyltransferases XM56_14895 IPR033942 Inositol monophosphatase XM56_14895 IPR000760 Inositol monophosphatase-like XM56_14895 IPR020550 Inositol monophosphatase, conserved site XM56_14895 IPR022337 Inositol monophosphatase, SuhB XM56_14895 IPR020583 Inositol monophosphatase, metal-binding site XM56_14900 IPR011541 Nickel/cobalt transporter, high-affinity XM56_14905 IPR016537 Uncharacterised conserved protein UCP008159, XM56_14905 IPR010412 Protein of unknown function DUF1007 XM56_14910 IPR036634 PRD domain superfamily XM56_14910 IPR011608 PRD domain XM56_14915 IPR024989 Major facilitator superfamily associated domain XM56_14915 IPR036259 MFS transporter superfamily XM56_14915 IPR026032 Probable 3-phenylpropionic acid transporter XM56_14920 IPR015424 Pyridoxal phosphate-dependent transferase XM56_14920 IPR039429 Serine hydroxymethyltransferase-like domain XM56_14920 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 XM56_14920 IPR001085 Serine hydroxymethyltransferase XM56_14920 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site XM56_14920 IPR015421 Pyridoxal phosphate-dependent transferase, major domain XM56_14925 IPR017927 FAD-binding domain, ferredoxin reductase-type XM56_14925 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain XM56_14925 IPR009050 Globin-like superfamily XM56_14925 IPR012292 Globin/Protoglobin XM56_14925 IPR023950 Flavohemoprotein XM56_14925 IPR000971 Globin XM56_14925 IPR017938 Riboflavin synthase-like beta-barrel XM56_14925 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain XM56_14925 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase XM56_14925 IPR001433 Oxidoreductase FAD/NAD(P)-binding XM56_14930 IPR041444 YhfZ, helix-turn-helix domain XM56_14930 IPR032791 Uncharacterised protein YhfZ, C-terminal domain XM56_14935 IPR011608 PRD domain XM56_14935 IPR036634 PRD domain superfamily XM56_14940 IPR029066 PLP-binding barrel XM56_14940 IPR001608 Alanine racemase, N-terminal XM56_14945 IPR017947 Aryldialkylphosphatase, zinc-binding site XM56_14945 IPR032466 Metal-dependent hydrolase XM56_14945 IPR001559 Phosphotriesterase XM56_14950 IPR021238 Protein of unknown function DUF2620 XM56_14955 IPR019733 Uncharacterised protein family YhfT XM56_14960 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal XM56_14960 IPR002187 Nitrogen regulatory protein PII XM56_14960 IPR002332 Nitrogen regulatory protein P-II, urydylation site XM56_14960 IPR017918 Nitrogen regulatory protein PII, conserved site XM56_14960 IPR011322 Nitrogen regulatory PII-like, alpha/beta XM56_14965 IPR000132 Nitrilase/cyanide hydratase, conserved site XM56_14965 IPR022310 NAD/GMP synthase XM56_14965 IPR014445 Glutamine-dependent NAD(+) synthetase XM56_14965 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XM56_14965 IPR036526 Carbon-nitrogen hydrolase superfamily XM56_14965 IPR003010 Carbon-nitrogen hydrolase XM56_14965 IPR003694 NAD(+) synthetase XM56_14970 IPR011006 CheY-like superfamily XM56_14970 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 XM56_14970 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 XM56_14970 IPR025944 Sigma-54 interaction domain, conserved site XM56_14970 IPR009057 Homeobox-like domain superfamily XM56_14970 IPR001789 Signal transduction response regulator, receiver domain XM56_14970 IPR002078 RNA polymerase sigma factor 54 interaction domain XM56_14970 IPR003593 AAA+ ATPase domain XM56_14970 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_14975 IPR025262 Quorum-sensing regulator protein G XM56_14980 IPR004358 Signal transduction histidine kinase-related protein, C-terminal XM56_14980 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily XM56_14980 IPR003594 Histidine kinase/HSP90-like ATPase XM56_14980 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XM56_14980 IPR005467 Histidine kinase domain XM56_14980 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain XM56_14990 IPR010073 Phosphoribosylformylglycinamidine synthase PurL XM56_14990 IPR017926 Glutamine amidotransferase XM56_14990 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain XM56_14990 IPR036676 PurM-like, C-terminal domain superfamily XM56_14990 IPR029062 Class I glutamine amidotransferase-like XM56_14990 IPR040707 Phosphoribosylformylglycinamidine synthase, N-terminal XM56_14990 IPR010918 PurM-like, C-terminal domain XM56_14990 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily XM56_14990 IPR036921 PurM-like, N-terminal domain superfamily XM56_14995 IPR023346 Lysozyme-like domain superfamily XM56_14995 IPR023703 Membrane-bound lytic murein transglycosylase F XM56_14995 IPR008258 Transglycosylase SLT domain 1 XM56_14995 IPR000189 Prokaryotic transglycosylase, active site XM56_14995 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF XM56_15000 IPR028883 tRNA-specific adenosine deaminase XM56_15000 IPR016193 Cytidine deaminase-like XM56_15000 IPR002125 Cytidine and deoxycytidylate deaminase domain XM56_15000 IPR016192 APOBEC/CMP deaminase, zinc-binding XM56_15010 IPR023214 HAD superfamily XM56_15010 IPR036412 HAD-like superfamily XM56_15010 IPR006435 HAD-superfamily hydrolase, subfamily IF, YfhB XM56_15015 IPR009060 UBA-like superfamily XM56_15015 IPR001347 Sugar isomerase (SIS) XM56_15015 IPR040190 N-acetylmuramic acid 6-phosphate etherase/glucokinase regulatory protein XM56_15015 IPR005486 Glucokinase regulatory protein, conserved site XM56_15015 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ XM56_15020 IPR035472 RpiR-like, SIS domain XM56_15020 IPR000281 Helix-turn-helix protein RpiR XM56_15020 IPR009057 Homeobox-like domain superfamily XM56_15020 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_15020 IPR001347 Sugar isomerase (SIS) XM56_15025 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain XM56_15025 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site XM56_15030 IPR003474 Gluconate transporter XM56_15035 IPR004568 Phosphopantetheine-protein transferase domain XM56_15035 IPR002582 Holo-[acyl carrier protein] synthase XM56_15035 IPR037143 4'-phosphopantetheinyl transferase domain superfamily XM56_15035 IPR008278 4'-phosphopantetheinyl transferase domain XM56_15040 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ XM56_15040 IPR013785 Aldolase-type TIM barrel XM56_15040 IPR036130 Pyridoxine 5'-phosphate synthase XM56_15045 IPR003717 Recombination protein O, RecO XM56_15045 IPR012340 Nucleic acid-binding, OB-fold XM56_15045 IPR022572 DNA replication/recombination mediator RecO, N-terminal XM56_15045 IPR037278 ARFGAP/RecO-like zinc finger XM56_15050 IPR004044 K Homology domain, type 2 XM56_15050 IPR009019 K homology domain superfamily, prokaryotic type XM56_15050 IPR030388 Era-type guanine nucleotide-binding (G) domain XM56_15050 IPR015946 K homology domain-like, alpha/beta XM56_15050 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_15050 IPR005225 Small GTP-binding protein domain XM56_15050 IPR005662 GTP-binding protein Era XM56_15050 IPR006073 GTP binding domain XM56_15055 IPR000999 Ribonuclease III domain XM56_15055 IPR011907 Ribonuclease III XM56_15055 IPR014720 Double-stranded RNA-binding domain XM56_15055 IPR036389 Ribonuclease III, endonuclease domain superfamily XM56_15060 IPR019756 Peptidase S26A, signal peptidase I, serine active site XM56_15060 IPR019757 Peptidase S26A, signal peptidase I, lysine active site XM56_15060 IPR019758 Peptidase S26A, signal peptidase I, conserved site XM56_15060 IPR000223 Peptidase S26A, signal peptidase I XM56_15060 IPR036286 LexA/Signal peptidase-like superfamily XM56_15060 IPR019533 Peptidase S26 XM56_15065 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_15065 IPR005225 Small GTP-binding protein domain XM56_15065 IPR000795 Transcription factor, GTP-binding domain XM56_15065 IPR013842 GTP-binding protein LepA, C-terminal XM56_15065 IPR035654 Elongation factor 4, domain IV XM56_15065 IPR038363 LepA, C-terminal domain superfamily XM56_15065 IPR000640 Elongation factor EFG, domain V-like XM56_15065 IPR035647 EF-G domain III/V-like XM56_15065 IPR006297 Elongation factor 4 XM56_15065 IPR004161 Translation elongation factor EFTu-like, domain 2 XM56_15065 IPR031157 Tr-type G domain, conserved site XM56_15075 IPR007359 Positive regulator of sigma(E), RseC/MucC XM56_15075 IPR026268 Protein RseC XM56_15080 IPR033434 MucB/RseB, N-terminal XM56_15080 IPR005588 MucB/RseB XM56_15080 IPR038484 MucB/RseB, C-terminal domain superfamily XM56_15080 IPR033436 MucB/RseB, C-terminal XM56_15085 IPR005572 Anti sigma-E protein RseA, N-terminal XM56_15085 IPR026279 Sigma-E factor negative regulatory protein RseA XM56_15085 IPR005573 Anti sigma-E protein RseA, C-terminal XM56_15085 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily XM56_15090 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 XM56_15090 IPR007627 RNA polymerase sigma-70 region 2 XM56_15090 IPR013324 RNA polymerase sigma factor, region 3/4-like XM56_15090 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site XM56_15090 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_15090 IPR039425 RNA polymerase sigma-70 like XM56_15090 IPR014284 RNA polymerase sigma-70 like domain XM56_15090 IPR014286 RNA polymerase sigma-70 RpoE type XM56_15090 IPR013325 RNA polymerase sigma factor, region 2 XM56_15095 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily XM56_15095 IPR036188 FAD/NAD(P)-binding domain superfamily XM56_15095 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal XM56_15095 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain XM56_15095 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily XM56_15095 IPR005288 L-aspartate oxidase XM56_15100 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XM56_15100 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase XM56_15100 IPR002052 DNA methylase, N-6 adenine-specific, conserved site XM56_15100 IPR007848 Methyltransferase small domain XM56_15105 IPR014001 Helicase superfamily 1/2, ATP-binding domain XM56_15105 IPR001650 Helicase, C-terminal XM56_15105 IPR014014 RNA helicase, DEAD-box type, Q motif XM56_15105 IPR028621 ATP-dependent RNA helicase SrmB XM56_15105 IPR011545 DEAD/DEAH box helicase domain XM56_15105 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_15105 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site XM56_15110 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal XM56_15110 IPR003346 Transposase, IS116/IS110/IS902 XM56_15120 IPR036770 Ankyrin repeat-containing domain superfamily XM56_15120 IPR020683 Ankyrin repeat-containing domain XM56_15120 IPR002110 Ankyrin repeat XM56_15135 IPR011140 Autonomous glycyl radical cofactor GrcA XM56_15135 IPR001150 Glycine radical domain XM56_15135 IPR019777 Formate C-acetyltransferase glycine radical, conserved site XM56_15140 IPR018085 Uracil-DNA glycosylase, active site XM56_15140 IPR002043 Uracil-DNA glycosylase family 1 XM56_15140 IPR036895 Uracil-DNA glycosylase-like domain superfamily XM56_15140 IPR005122 Uracil-DNA glycosylase-like XM56_15145 IPR013805 GrpE nucleotide exchange factor, coiled-coil XM56_15145 IPR000740 GrpE nucleotide exchange factor XM56_15145 IPR009012 GrpE nucleotide exchange factor, head XM56_15150 IPR002504 NAD kinase XM56_15150 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal XM56_15150 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily XM56_15150 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal XM56_15155 IPR003395 RecF/RecN/SMC, N-terminal XM56_15155 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_15155 IPR004604 DNA recombination/repair protein RecN XM56_15160 IPR026592 Outer membrane protein assembly factor BamE XM56_15160 IPR007450 Lipoprotein SmpA/OmlA XM56_15160 IPR037873 BamE-like XM56_15165 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp XM56_15165 IPR037021 RnfH superfamily XM56_15165 IPR005346 RnfH protein XM56_15170 IPR023393 START-like domain superfamily XM56_15170 IPR005031 Coenzyme Q-binding protein COQ10, START domain XM56_15175 IPR023620 Small protein B XM56_15175 IPR000037 SsrA-binding protein XM56_15175 IPR020081 SsrA-binding protein, conserved site XM56_15180 IPR011010 DNA breaking-rejoining enzyme, catalytic core XM56_15180 IPR002104 Integrase, catalytic domain XM56_15180 IPR038488 Integrase, DNA-binding domain superfamily XM56_15180 IPR025166 Integrase, DNA-binding domain XM56_15180 IPR010998 Integrase/recombinase, N-terminal XM56_15180 IPR013762 Integrase-like, catalytic domain superfamily XM56_15200 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XM56_15200 IPR018117 DNA methylase, C-5 cytosine-specific, active site XM56_15200 IPR001525 C-5 cytosine methyltransferase XM56_15205 IPR007001 Bacterial shufflon protein, N-terminal XM56_15205 IPR029017 Enolase-like, N-terminal XM56_15220 IPR027351 (+) RNA virus helicase core domain XM56_15220 IPR041533 Bartonella effector protein, BID domain XM56_15220 IPR005053 MobA/MobL protein XM56_15220 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_15220 IPR014136 Ti-type conjugative transfer relaxase TraA XM56_15225 IPR003593 AAA+ ATPase domain XM56_15225 IPR001270 ClpA/B family XM56_15225 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein XM56_15225 IPR002611 IstB-like ATP-binding protein XM56_15225 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_15230 IPR017894 HTH domain, IS21 transposase-type XM56_15230 IPR001584 Integrase, catalytic core XM56_15240 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel XM56_15240 IPR006879 Carbohydrate deacetylase YdjC-like XM56_15240 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria XM56_15245 IPR013096 Cupin 2, conserved barrel XM56_15245 IPR014710 RmlC-like jelly roll fold XM56_15245 IPR009057 Homeobox-like domain superfamily XM56_15245 IPR018060 DNA binding HTH domain, AraC-type XM56_15245 IPR018062 HTH domain AraC-type, conserved site XM56_15245 IPR011051 RmlC-like cupin domain superfamily XM56_15245 IPR020449 Transcription regulator HTH, AraC- type XM56_15250 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit XM56_15250 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily XM56_15255 IPR018120 Glycoside hydrolase family 1, active site XM56_15255 IPR001360 Glycoside hydrolase family 1 XM56_15255 IPR017853 Glycoside hydrolase superfamily XM56_15260 IPR004796 Phosphotransferase system, cellobiose-type IIC component XM56_15260 IPR004501 Phosphotransferase system, EIIC component, type 3 XM56_15260 IPR003352 Phosphotransferase system, EIIC XM56_15265 IPR036095 PTS system IIB component-like superfamily XM56_15265 IPR003501 Phosphotransferase system, EIIB component, type 2/3 XM56_15265 IPR013012 Phosphotransferase system, EIIB component, type 3 XM56_15270 IPR012938 Glucose/Sorbosone dehydrogenase XM56_15270 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase XM56_15270 IPR011042 Six-bladed beta-propeller, TolB-like XM56_15285 IPR003691 Putative fluoride ion transporter CrcB XM56_15290 IPR003691 Putative fluoride ion transporter CrcB XM56_15295 IPR013099 Potassium channel domain XM56_15295 IPR036291 NAD(P)-binding domain superfamily XM56_15295 IPR003148 Regulator of K+ conductance, N-terminal XM56_15300 IPR010486 HNS-dependent expression A/B XM56_15300 IPR038303 HNS-dependent expression A/B superfamily XM56_15300 IPR028623 HNS-dependent expression B XM56_15305 IPR004688 Transition metal uptake transporter nickel/cobalt XM56_15305 IPR011541 Nickel/cobalt transporter, high-affinity XM56_15310 IPR029020 Ammonium/urea transporter XM56_15310 IPR004937 Urea transporter XM56_15315 IPR002669 Urease accessory protein UreD XM56_15320 IPR003495 CobW/HypB/UreG, nucleotide-binding domain XM56_15320 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_15320 IPR004400 Urease accessory protein UreG XM56_15325 IPR038277 UreF domain superfamily XM56_15325 IPR002639 Urease accessory protein UreF XM56_15330 IPR036118 UreE urease accessory, N-terminal domain superfamily XM56_15330 IPR007864 Urease accessory protein UreE, C-terminal domain XM56_15330 IPR012406 Urease accessory protein UreE XM56_15330 IPR004029 UreE urease accessory, N-terminal XM56_15335 IPR006680 Amidohydrolase-related XM56_15335 IPR011059 Metal-dependent hydrolase, composite domain superfamily XM56_15335 IPR032466 Metal-dependent hydrolase XM56_15335 IPR011612 Urease alpha-subunit, N-terminal domain XM56_15335 IPR017950 Urease active site XM56_15335 IPR005848 Urease, alpha subunit XM56_15335 IPR029754 Urease nickel binding site XM56_15335 IPR017951 Urease alpha subunit, C-terminal XM56_15340 IPR002019 Urease, beta subunit XM56_15340 IPR036461 Urease, beta subunit superfamily XM56_15345 IPR036463 Urease, gamma subunit superfamily XM56_15345 IPR002026 Urease, gamma/gamma-beta subunit XM56_15345 IPR012010 Urease, gamma subunit XM56_15350 IPR003593 AAA+ ATPase domain XM56_15350 IPR017871 ABC transporter, conserved site XM56_15350 IPR014137 Nickel import ATP-binding protein NikE XM56_15350 IPR003439 ABC transporter-like XM56_15350 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_15350 IPR015858 ABC transporter, nickel import, NikE XM56_15355 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_15355 IPR003593 AAA+ ATPase domain XM56_15355 IPR003439 ABC transporter-like XM56_15355 IPR014138 Nickel import ATP-binding protein NikD XM56_15355 IPR015857 ABC transporter, nickel import, NikD XM56_15355 IPR017871 ABC transporter, conserved site XM56_15360 IPR025966 Oligopeptide transport permease C-like, N-terminal domain XM56_15360 IPR035906 MetI-like superfamily XM56_15360 IPR000515 ABC transporter type 1, transmembrane domain MetI-like XM56_15365 IPR000515 ABC transporter type 1, transmembrane domain MetI-like XM56_15365 IPR035906 MetI-like superfamily XM56_15370 IPR000914 Solute-binding protein family 5 domain XM56_15370 IPR023765 Solute-binding protein family 5, conserved site XM56_15370 IPR039424 Solute-binding protein family 5 XM56_15370 IPR030678 Peptide/nickel binding protein, MppA-type XM56_15400 IPR019844 Cold-shock (CSD) domain XM56_15400 IPR011129 Cold shock domain XM56_15400 IPR012156 Cold shock, CspA XM56_15400 IPR002059 Cold-shock protein, DNA-binding XM56_15400 IPR012340 Nucleic acid-binding, OB-fold XM56_15415 IPR018994 Protein of unknown function DUF2002 XM56_15420 IPR023008 Uncharacterized MFS-type transporter YhhS-like XM56_15420 IPR036259 MFS transporter superfamily XM56_15420 IPR020846 Major facilitator superfamily domain XM56_15420 IPR011701 Major facilitator superfamily XM56_15425 IPR009057 Homeobox-like domain superfamily XM56_15425 IPR018060 DNA binding HTH domain, AraC-type XM56_15425 IPR018062 HTH domain AraC-type, conserved site XM56_15435 IPR009435 Acid shock XM56_15435 IPR023497 Acid shock protein XM56_15445 IPR010279 Inner membrane protein YqjD/ElaB XM56_15450 IPR015421 Pyridoxal phosphate-dependent transferase, major domain XM56_15450 IPR000524 Transcription regulator HTH, GntR XM56_15450 IPR015424 Pyridoxal phosphate-dependent transferase XM56_15450 IPR004839 Aminotransferase, class I/classII XM56_15450 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_15450 IPR036390 Winged helix DNA-binding domain superfamily XM56_15455 IPR029032 AhpD-like XM56_15455 IPR003779 Carboxymuconolactone decarboxylase-like XM56_15455 IPR004675 Alkylhydroperoxidase AhpD core XM56_15465 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial XM56_15465 IPR029039 Flavoprotein-like superfamily XM56_15465 IPR004465 Ribonucleotide reductase Class Ib, NrdI XM56_15470 IPR013554 Ribonucleotide reductase N-terminal XM56_15470 IPR000788 Ribonucleotide reductase large subunit, C-terminal XM56_15470 IPR013509 Ribonucleotide reductase large subunit, N-terminal XM56_15470 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE XM56_15470 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal XM56_15470 IPR039718 Ribonucleoside-diphosphate reductase large subunit XM56_15470 IPR013346 Ribonucleotide reductase, class I , alpha subunit XM56_15475 IPR030475 Ribonucleotide reductase small subunit, acitve site XM56_15475 IPR000358 Ribonucleotide reductase small subunit family XM56_15475 IPR012348 Ribonucleotide reductase-like XM56_15475 IPR009078 Ferritin-like superfamily XM56_15475 IPR026494 Ribonucleoside reductase subunit beta, NrdF XM56_15475 IPR033909 Ribonucleotide reductase small subunit XM56_15480 IPR017871 ABC transporter, conserved site XM56_15480 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_15480 IPR003593 AAA+ ATPase domain XM56_15480 IPR005892 Glycine betaine transport ATP-binding subunit XM56_15480 IPR003439 ABC transporter-like XM56_15480 IPR000644 CBS domain XM56_15485 IPR000515 ABC transporter type 1, transmembrane domain MetI-like XM56_15485 IPR035906 MetI-like superfamily XM56_15490 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain XM56_15500 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain XM56_15500 IPR036397 Ribonuclease H superfamily XM56_15500 IPR013520 Exonuclease, RNase T/DNA polymerase III XM56_15500 IPR012337 Ribonuclease H-like superfamily XM56_15500 IPR006309 DNA polymerase 3, epsilon subunit XM56_15505 IPR036397 Ribonuclease H superfamily XM56_15505 IPR012337 Ribonuclease H-like superfamily XM56_15505 IPR022892 Ribonuclease HI XM56_15505 IPR002156 Ribonuclease H domain XM56_15510 IPR013216 Methyltransferase type 11 XM56_15510 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XM56_15510 IPR026669 Arsenite methyltransferase-like XM56_15515 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain XM56_15515 IPR017782 Hydroxyacylglutathione hydrolase XM56_15515 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain XM56_15515 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like XM56_15515 IPR001279 Metallo-beta-lactamase XM56_15520 IPR036779 LysM domain superfamily XM56_15520 IPR023346 Lysozyme-like domain superfamily XM56_15520 IPR018392 LysM domain XM56_15520 IPR000189 Prokaryotic transglycosylase, active site XM56_15520 IPR008258 Transglycosylase SLT domain 1 XM56_15525 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal XM56_15525 IPR003346 Transposase, IS116/IS110/IS902 XM56_15530 IPR036691 Endonuclease/exonuclease/phosphatase superfamily XM56_15530 IPR005135 Endonuclease/exonuclease/phosphatase XM56_15530 IPR022958 Uncharacterised protein family UPF0294 XM56_15535 IPR036259 MFS transporter superfamily XM56_15535 IPR020846 Major facilitator superfamily domain XM56_15535 IPR011701 Major facilitator superfamily XM56_15540 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_15540 IPR036390 Winged helix DNA-binding domain superfamily XM56_15540 IPR005119 LysR, substrate-binding XM56_15540 IPR000847 Transcription regulator HTH, LysR XM56_15545 IPR023210 NADP-dependent oxidoreductase domain XM56_15545 IPR020471 Aldo/keto reductase XM56_15545 IPR018170 Aldo/keto reductase, conserved site XM56_15545 IPR036812 NADP-dependent oxidoreductase domain superfamily XM56_15555 IPR001207 Transposase, mutator type XM56_15585 IPR036412 HAD-like superfamily XM56_15585 IPR023214 HAD superfamily XM56_15585 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase XM56_15585 IPR006543 Histidinol-phosphate phosphatase XM56_15585 IPR006549 HAD-superfamily hydrolase,subfamily IIIA XM56_15590 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria XM56_15590 IPR018449 NIL domain XM56_15590 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal XM56_15590 IPR003593 AAA+ ATPase domain XM56_15590 IPR017871 ABC transporter, conserved site XM56_15590 IPR003439 ABC transporter-like XM56_15590 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_15590 IPR026253 Methionine import ATP-binding protein MetN XM56_15590 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain XM56_15595 IPR000515 ABC transporter type 1, transmembrane domain MetI-like XM56_15595 IPR035906 MetI-like superfamily XM56_15600 IPR004872 Lipoprotein NlpA family XM56_15605 IPR030852 Outer membrane lipoprotein RcsF XM56_15610 IPR036413 YaeB-like superfamily XM56_15610 IPR040372 YaeB-like XM56_15610 IPR023368 Uncharacterised protein family UPF0066, conserved site XM56_15610 IPR041369 TrmO, C-terminal XM56_15610 IPR036414 YaeB, N-terminal domain superfamily XM56_15610 IPR023370 TrmO-like, N-terminal domain XM56_15615 IPR004154 Anticodon-binding XM56_15615 IPR033730 Prokaryote proline-tRNA ligase core domain XM56_15615 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) XM56_15615 IPR006195 Aminoacyl-tRNA synthetase, class II XM56_15615 IPR036621 Anticodon-binding domain superfamily XM56_15615 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain XM56_15615 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily XM56_15615 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 XM56_15615 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type XM56_15615 IPR002316 Proline-tRNA ligase, class IIa XM56_15620 IPR007298 Copper resistance lipoprotein NlpE XM56_15620 IPR038139 NlpE, C-terminal domain superfamily XM56_15620 IPR033450 NlpE, C-terminal OB domain XM56_15625 IPR000352 Peptide chain release factor class I XM56_15630 IPR011335 Restriction endonuclease type II-like XM56_15630 IPR038590 YaeQ superfamily XM56_15630 IPR009822 YaeQ XM56_15635 IPR009624 Uncharacterised protein family UPF0253 XM56_15640 IPR038626 Rof-like superfamily XM56_15640 IPR009778 Modulator of Rho-dependent transcription termination XM56_15640 IPR023534 Rof/RNase P-like XM56_15645 IPR009056 Cytochrome c-like domain XM56_15645 IPR036909 Cytochrome c-like domain superfamily XM56_15650 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal XM56_15650 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal XM56_15650 IPR012094 tRNA(Ile)-lysidine synthase XM56_15650 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal XM56_15650 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain XM56_15650 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XM56_15655 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase XM56_15655 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain XM56_15655 IPR037523 Vicinal oxygen chelate (VOC) domain XM56_15655 IPR037478 YwkD-like domain XM56_15665 IPR001095 Acetyl-CoA carboxylase, alpha subunit XM56_15665 IPR029045 ClpP/crotonase-like domain superfamily XM56_15665 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal XM56_15670 IPR016195 Polymerase/histidinol phosphatase-like XM56_15670 IPR003141 Polymerase/histidinol phosphatase, N-terminal XM56_15670 IPR004805 DNA polymerase III, alpha subunit XM56_15670 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type XM56_15670 IPR004013 PHP domain XM56_15670 IPR029460 DNA polymerase, helix-hairpin-helix motif XM56_15670 IPR040982 DNA polymerase III alpha subunit finger domain XM56_15670 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain XM56_15670 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain XM56_15675 IPR022898 Ribonuclease HII XM56_15675 IPR001352 Ribonuclease HII/HIII XM56_15675 IPR036397 Ribonuclease H superfamily XM56_15675 IPR024567 Ribonuclease HII/HIII domain XM56_15675 IPR012337 Ribonuclease H-like superfamily XM56_15680 IPR003835 Glycosyl transferase, family 19 XM56_15685 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase XM56_15685 IPR011004 Trimeric LpxA-like superfamily XM56_15685 IPR018357 Hexapeptide transferase, conserved site XM56_15685 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily XM56_15685 IPR001451 Hexapeptide repeat XM56_15685 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal XM56_15690 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ XM56_15690 IPR029069 HotDog domain superfamily XM56_15690 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ XM56_15695 IPR011004 Trimeric LpxA-like superfamily XM56_15695 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD XM56_15695 IPR018357 Hexapeptide transferase, conserved site XM56_15695 IPR001451 Hexapeptide repeat XM56_15695 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region XM56_15700 IPR005632 Chaperone protein Skp XM56_15700 IPR024930 Skp domain superfamily XM56_15705 IPR023707 Outer membrane protein assembly factor BamA XM56_15705 IPR034746 POTRA domain XM56_15705 IPR039910 Surface antigen D15-like XM56_15705 IPR010827 POTRA domain, BamA/TamA-like XM56_15705 IPR000184 Bacterial surface antigen (D15) XM56_15710 IPR001478 PDZ domain XM56_15710 IPR041489 PDZ domain 6 XM56_15710 IPR036034 PDZ superfamily XM56_15710 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase XM56_15710 IPR008915 Peptidase M50 XM56_15715 IPR000374 Phosphatidate cytidylyltransferase XM56_15720 IPR036424 Decaprenyl diphosphate synthase-like superfamily XM56_15720 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site XM56_15720 IPR001441 Decaprenyl diphosphate synthase-like XM56_15725 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase XM56_15725 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal XM56_15725 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal XM56_15725 IPR026877 DXP reductoisomerase C-terminal domain XM56_15725 IPR036291 NAD(P)-binding domain superfamily XM56_15725 IPR036169 DXP reductoisomerase, C-terminal domain superfamily XM56_15730 IPR002661 Ribosome recycling factor XM56_15730 IPR023584 Ribosome recycling factor domain XM56_15730 IPR036191 RRF superfamily XM56_15735 IPR011817 Uridylate kinase XM56_15735 IPR001048 Aspartate/glutamate/uridylate kinase XM56_15735 IPR036393 Acetylglutamate kinase-like superfamily XM56_15735 IPR015963 Uridylate kinase, bacteria XM56_15740 IPR036402 Elongation factor Ts, dimerisation domain superfamily XM56_15740 IPR009060 UBA-like superfamily XM56_15740 IPR018101 Translation elongation factor Ts, conserved site XM56_15740 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation XM56_15740 IPR001816 Translation elongation factor EFTs/EF1B XM56_15745 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid XM56_15745 IPR001865 Ribosomal protein S2 XM56_15745 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily XM56_15745 IPR018130 Ribosomal protein S2, conserved site XM56_15750 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 XM56_15750 IPR036005 Creatinase/aminopeptidase-like XM56_15750 IPR000994 Peptidase M24 XM56_15750 IPR001714 Peptidase M24, methionine aminopeptidase XM56_15755 IPR006674 HD domain XM56_15755 IPR003607 HD/PDEase domain XM56_15755 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme XM56_15755 IPR002934 Polymerase, nucleotidyl transferase domain XM56_15755 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase XM56_15755 IPR002912 ACT domain XM56_15760 IPR001451 Hexapeptide repeat XM56_15760 IPR018357 Hexapeptide transferase, conserved site XM56_15760 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily XM56_15760 IPR011004 Trimeric LpxA-like superfamily XM56_15760 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family XM56_15760 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 XM56_15765 IPR020911 Uncharacterised protein family UPF0325 XM56_15770 IPR008254 Flavodoxin/nitric oxide synthase XM56_15770 IPR029039 Flavoprotein-like superfamily XM56_15770 IPR001094 Flavodoxin-like XM56_15775 IPR006145 Pseudouridine synthase, RsuA/RluA XM56_15775 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site XM56_15775 IPR020103 Pseudouridine synthase, catalytic domain superfamily XM56_15780 IPR007384 Protein of unknown function UCP006257 XM56_15780 IPR036814 YqcC-like superfamily XM56_15780 IPR023376 YqcC-like domain XM56_15785 IPR038228 Syd superfamily XM56_15785 IPR009948 Syd XM56_15790 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF XM56_15790 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal XM56_15790 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 XM56_15795 IPR021826 Domain of unknown function DUF3412 XM56_15795 IPR031100 LOG family XM56_15795 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily XM56_15795 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal XM56_15800 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal XM56_15800 IPR002421 5'-3' exonuclease, N-terminal XM56_15800 IPR036279 5'-3' exonuclease, C-terminal domain superfamily XM56_15800 IPR020045 DNA polymerase I-like, H3TH domain XM56_15800 IPR038969 Flap endonuclease XM56_15800 IPR008918 Helix-hairpin-helix motif, class 2 XM56_15800 IPR029060 PIN-like domain superfamily XM56_15800 IPR022895 Flap endonuclease Xni XM56_15810 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XM56_15810 IPR011224 Ribosomal RNA large subunit methyltransferase M XM56_15810 IPR002877 Ribosomal RNA methyltransferase FtsJ domain XM56_15810 IPR040739 RlmM ferredoxin-like domain XM56_15815 IPR006696 Protein of unknown function DUF423 XM56_15820 IPR000847 Transcription regulator HTH, LysR XM56_15820 IPR005119 LysR, substrate-binding XM56_15820 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_15820 IPR036390 Winged helix DNA-binding domain superfamily XM56_15825 IPR010920 LSM domain superfamily XM56_15825 IPR010305 Protein of unknown function DUF903 XM56_15830 IPR015421 Pyridoxal phosphate-dependent transferase, major domain XM56_15830 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 XM56_15830 IPR015424 Pyridoxal phosphate-dependent transferase XM56_15830 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA XM56_15830 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site XM56_15830 IPR000192 Aminotransferase class V domain XM56_15835 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE XM56_15835 IPR003808 Fe-S metabolism associated domain, SufE-like XM56_15840 IPR035985 Ubiquitin-activating enzyme XM56_15840 IPR000594 THIF-type NAD/FAD binding fold XM56_15845 IPR036908 RlpA-like domain superfamily XM56_15845 IPR034654 MltA, 3D domain XM56_15845 IPR026044 Membrane-bound lytic murein transglycosylase A XM56_15845 IPR010611 3D domain XM56_15845 IPR005300 Lytic transglycosylase MltA, domain B XM56_15855 IPR006311 Twin-arginine translocation pathway, signal sequence XM56_15855 IPR021731 AMIN domain XM56_15855 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain XM56_15860 IPR036393 Acetylglutamate kinase-like superfamily XM56_15860 IPR010167 Amino-acid N-acetyltransferase XM56_15860 IPR033719 N-acetylglutamate synthase, kinase-like domain XM56_15860 IPR000182 GNAT domain XM56_15860 IPR001048 Aspartate/glutamate/uridylate kinase XM56_15860 IPR016181 Acyl-CoA N-acyltransferase XM56_15870 IPR041851 RecBCD enzyme subunit RecD, N-terminal domain XM56_15870 IPR006344 RecBCD enzyme subunit RecD XM56_15870 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_15870 IPR003593 AAA+ ATPase domain XM56_15870 IPR027785 UvrD-like helicase C-terminal domain XM56_15875 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type XM56_15875 IPR004586 RecBCD enzyme subunit RecB XM56_15875 IPR011335 Restriction endonuclease type II-like XM56_15875 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_15875 IPR014016 UvrD-like helicase, ATP-binding domain XM56_15875 IPR034739 UvrD/AddA helicase, N-terminal XM56_15875 IPR011604 Exonuclease, phage-type/RecB, C-terminal XM56_15875 IPR000212 DNA helicase, UvrD/REP type XM56_15875 IPR014017 UvrD-like DNA helicase, C-terminal XM56_15880 IPR007863 Peptidase M16, C-terminal XM56_15880 IPR032632 Peptidase M16, middle/third domain XM56_15880 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like XM56_15880 IPR011765 Peptidase M16, N-terminal XM56_15880 IPR001431 Peptidase M16, zinc-binding site XM56_15885 IPR011335 Restriction endonuclease type II-like XM56_15885 IPR041500 RecC, C-terminal XM56_15885 IPR006697 RecBCD enzyme subunit RecC XM56_15885 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_15885 IPR013986 DExx box DNA helicase domain superfamily XM56_15890 IPR022204 Prepilin peptidase dependent protein C XM56_15890 IPR012902 Prokaryotic N-terminal methylation site XM56_15910 IPR000398 Thymidylate synthase XM56_15910 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily XM56_15910 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain XM56_15910 IPR020940 Thymidylate synthase, active site XM56_15915 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt XM56_15920 IPR029016 GAF-like domain superfamily XM56_15920 IPR006318 Phosphotransferase system, enzyme I-like XM56_15920 IPR036637 Phosphohistidine domain superfamily XM56_15920 IPR023151 PEP-utilising enzyme, conserved site XM56_15920 IPR000121 PEP-utilising enzyme, C-terminal XM56_15920 IPR036618 PtsI, HPr-binding domain superfamily XM56_15920 IPR008731 Phosphotransferase system, enzyme I N-terminal XM56_15920 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily XM56_15920 IPR040442 Pyruvate kinase-like domain superfamily XM56_15920 IPR003018 GAF domain XM56_15920 IPR018274 PEP-utilising enzyme, active site XM56_15920 IPR008279 PEP-utilising enzyme, mobile domain XM56_15925 IPR015797 NUDIX hydrolase-like domain superfamily XM56_15925 IPR020084 NUDIX hydrolase, conserved site XM56_15925 IPR000086 NUDIX hydrolase domain XM56_15925 IPR020476 NUDIX hydrolase XM56_15925 IPR022927 RNA pyrophosphohydrolase RppH XM56_15935 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II XM56_15935 IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II superfamily XM56_15935 IPR011335 Restriction endonuclease type II-like XM56_15935 IPR004230 DNA mismatch repair protein MutH XM56_15940 IPR005496 Integral membrane protein TerC XM56_15945 IPR020471 Aldo/keto reductase XM56_15945 IPR023210 NADP-dependent oxidoreductase domain XM56_15945 IPR036812 NADP-dependent oxidoreductase domain superfamily XM56_15950 IPR023727 Lysophospholipid transporter LplT XM56_15950 IPR011701 Major facilitator superfamily XM56_15950 IPR036259 MFS transporter superfamily XM56_15955 IPR002123 Phospholipid/glycerol acyltransferase XM56_15955 IPR042099 AMP-dependent synthetase-like superfamily XM56_15955 IPR020845 AMP-binding, conserved site XM56_15955 IPR000873 AMP-dependent synthetase/ligase XM56_15955 IPR023775 Bifunctional protein Aas XM56_15955 IPR025110 AMP-binding enzyme, C-terminal domain XM56_15965 IPR009010 Aspartate decarboxylase-like domain superfamily XM56_15965 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase XM56_15965 IPR006657 Molybdopterin dinucleotide-binding domain XM56_15965 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site XM56_15965 IPR006656 Molybdopterin oxidoreductase XM56_15970 IPR000843 LacI-type HTH domain XM56_15970 IPR028082 Periplasmic binding protein-like I XM56_15970 IPR010982 Lambda repressor-like, DNA-binding domain superfamily XM56_15975 IPR000183 Ornithine/DAP/Arg decarboxylase XM56_15975 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal XM56_15975 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal XM56_15975 IPR002986 Diaminopimelate decarboxylase, LysA XM56_15975 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal XM56_15975 IPR029066 PLP-binding barrel XM56_15975 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site XM56_15975 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site XM56_15980 IPR036390 Winged helix DNA-binding domain superfamily XM56_15980 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_15980 IPR000847 Transcription regulator HTH, LysR XM56_15980 IPR037414 Transcriptional activator protein LysR, PBP2 domain XM56_15980 IPR005119 LysR, substrate-binding XM56_15985 IPR020846 Major facilitator superfamily domain XM56_15985 IPR011701 Major facilitator superfamily XM56_15985 IPR036259 MFS transporter superfamily XM56_15990 IPR005119 LysR, substrate-binding XM56_15990 IPR000847 Transcription regulator HTH, LysR XM56_15990 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_15990 IPR036390 Winged helix DNA-binding domain superfamily XM56_16025 IPR000045 Prepilin type IV endopeptidase, peptidase domain XM56_16025 IPR014032 Peptidase A24A, prepilin type IV, bacterial XM56_16025 IPR010627 Peptidase A24A, N-terminal XM56_16055 IPR000983 Bacterial general secretion pathway protein G-type pilin XM56_16055 IPR013545 Type II secretion system protein G XM56_16055 IPR010054 General secretion pathway protein G XM56_16055 IPR012902 Prokaryotic N-terminal methylation site XM56_16060 IPR001992 Type II secretion system conserved site XM56_16060 IPR018076 Type II secretion system F domain XM56_16060 IPR003004 GspF/PilC family XM56_16060 IPR011850 General secretion pathway protein F XM56_16060 IPR042094 Type II secretion system F domain superfamily XM56_16070 IPR005644 NolW-like XM56_16070 IPR004845 Type II secretion system GspD, conserved site XM56_16070 IPR013356 Type II secretion system GspD XM56_16070 IPR004846 Type II/III secretion system XM56_16070 IPR038591 NolW-like superfamily XM56_16070 IPR001775 GspD/PilQ family XM56_16085 IPR036874 Carbonic anhydrase superfamily XM56_16085 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site XM56_16085 IPR001765 Carbonic anhydrase XM56_16090 IPR002577 Helix-turn-helix, HxlR type XM56_16090 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_16090 IPR036390 Winged helix DNA-binding domain superfamily XM56_16090 IPR011991 ArsR-like helix-turn-helix domain XM56_16095 IPR036291 NAD(P)-binding domain superfamily XM56_16095 IPR002347 Short-chain dehydrogenase/reductase SDR XM56_16100 IPR022835 Chaperone modulatory protein CbpM XM56_16105 IPR001623 DnaJ domain XM56_16105 IPR018253 DnaJ domain, conserved site XM56_16105 IPR023859 DNA-binding protein, curved-DNA XM56_16105 IPR036869 Chaperone J-domain superfamily XM56_16105 IPR008971 HSP40/DnaJ peptide-binding XM56_16105 IPR002939 Chaperone DnaJ, C-terminal XM56_16120 IPR011701 Major facilitator superfamily XM56_16120 IPR020846 Major facilitator superfamily domain XM56_16120 IPR036259 MFS transporter superfamily XM56_16125 IPR030458 Glycosyl hydrolases family 31, active site XM56_16125 IPR017853 Glycoside hydrolase superfamily XM56_16125 IPR000322 Glycoside hydrolase family 31 XM56_16125 IPR013780 Glycosyl hydrolase, all-beta XM56_16125 IPR033403 Domain of unknown function DUF5110 XM56_16125 IPR032513 Alpha-glucosidase, domain of unknown function DUF4968 XM56_16125 IPR030459 Glycosyl hydrolases family 31, conserved site XM56_16125 IPR011013 Galactose mutarotase-like domain superfamily XM56_16125 IPR025887 Glycoside hydrolase family 31, N-terminal domain XM56_16135 IPR019888 Transcription regulator AsnC-type XM56_16135 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain XM56_16135 IPR011991 ArsR-like helix-turn-helix domain XM56_16135 IPR011008 Dimeric alpha-beta barrel XM56_16135 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_16135 IPR036390 Winged helix DNA-binding domain superfamily XM56_16135 IPR019885 Transcription regulator HTH, AsnC-type, conserved site XM56_16135 IPR000485 AsnC-type HTH domain XM56_16145 IPR000014 PAS domain XM56_16145 IPR035965 PAS domain superfamily XM56_16145 IPR000700 PAS-associated, C-terminal XM56_16145 IPR029787 Nucleotide cyclase XM56_16145 IPR000160 GGDEF domain XM56_16145 IPR013656 PAS fold-4 XM56_16150 IPR037401 SnoaL-like domain XM56_16150 IPR032710 NTF2-like domain superfamily XM56_16165 IPR001207 Transposase, mutator type XM56_16170 IPR022452 Antitoxin MqsA XM56_16170 IPR010982 Lambda repressor-like, DNA-binding domain superfamily XM56_16170 IPR001387 Cro/C1-type helix-turn-helix domain XM56_16170 IPR022453 Zinc finger, MqsA-type XM56_16170 IPR032758 Antitoxin MqsA/HigA-2 XM56_16175 IPR031451 mRNA interferase toxin MqsR XM56_16175 IPR038493 Toxin MqsR superfamily XM56_16190 IPR010982 Lambda repressor-like, DNA-binding domain superfamily XM56_16190 IPR001387 Cro/C1-type helix-turn-helix domain XM56_16205 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily XM56_16205 IPR006120 Resolvase, HTH domain XM56_16205 IPR009057 Homeobox-like domain superfamily XM56_16205 IPR006119 Resolvase, N-terminal catalytic domain XM56_16205 IPR006118 Recombinase, conserved site XM56_16220 IPR017894 HTH domain, IS21 transposase-type XM56_16220 IPR001584 Integrase, catalytic core XM56_16225 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_16225 IPR003593 AAA+ ATPase domain XM56_16225 IPR002611 IstB-like ATP-binding protein XM56_16225 IPR001270 ClpA/B family XM56_16225 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein XM56_16240 IPR002313 Lysine-tRNA ligase, class II XM56_16240 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) XM56_16240 IPR006195 Aminoacyl-tRNA synthetase, class II XM56_16240 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type XM56_16240 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal XM56_16240 IPR012340 Nucleic acid-binding, OB-fold XM56_16240 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II XM56_16245 IPR000352 Peptide chain release factor class I XM56_16245 IPR005139 Peptide chain release factor XM56_16245 IPR004374 Peptide chain release factor 2 XM56_16250 IPR003156 DHHA1 domain XM56_16250 IPR041122 RecJ, OB domain XM56_16250 IPR004610 Bacterial RecJ exonuclease XM56_16250 IPR038763 DHH phosphoesterase superfamily XM56_16250 IPR001667 DDH domain XM56_16255 IPR012336 Thioredoxin-like fold XM56_16255 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily XM56_16255 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal XM56_16255 IPR013766 Thioredoxin domain XM56_16255 IPR017937 Thioredoxin, conserved site XM56_16255 IPR036249 Thioredoxin-like superfamily XM56_16255 IPR033954 Disulphide bond isomerase, DsbC/G XM56_16260 IPR002104 Integrase, catalytic domain XM56_16260 IPR011010 DNA breaking-rejoining enzyme, catalytic core XM56_16260 IPR013762 Integrase-like, catalytic domain superfamily XM56_16260 IPR023009 Tyrosine recombinase XerC/XerD XM56_16260 IPR004107 Integrase, SAM-like, N-terminal XM56_16260 IPR010998 Integrase/recombinase, N-terminal XM56_16260 IPR011932 Tyrosine recombinase XerD XM56_16265 IPR029039 Flavoprotein-like superfamily XM56_16265 IPR010086 Flavodoxin, long chain XM56_16265 IPR001226 Flavodoxin, conserved site XM56_16265 IPR008254 Flavodoxin/nitric oxide synthase XM56_16270 IPR010364 Uncharacterised protein family, inner membrane CreD XM56_16275 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XM56_16275 IPR004358 Signal transduction histidine kinase-related protein, C-terminal XM56_16275 IPR029151 Periplasmic sensor-like domain superfamily XM56_16275 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily XM56_16275 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain XM56_16275 IPR005467 Histidine kinase domain XM56_16275 IPR003660 HAMP domain XM56_16275 IPR003594 Histidine kinase/HSP90-like ATPase XM56_16280 IPR016032 Signal transduction response regulator, C-terminal effector XM56_16280 IPR001867 OmpR/PhoB-type DNA-binding domain XM56_16280 IPR011006 CheY-like superfamily XM56_16280 IPR039420 Transcriptional regulatory protein WalR-like XM56_16280 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_16280 IPR001789 Signal transduction response regulator, receiver domain XM56_16285 IPR009883 Inner membrane protein YgfX XM56_16290 IPR005631 Flavinator of succinate dehydrogenase XM56_16290 IPR036714 Flavinator of succinate dehydrogenase superfamily XM56_16295 IPR017703 YgfZ/GcvT conserved site XM56_16295 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal XM56_16295 IPR006222 Aminomethyltransferase, folate-binding domain XM56_16295 IPR023758 tRNA-modifying protein YgfZ XM56_16305 IPR005744 Hly-III XM56_16305 IPR004254 AdipoR/Haemolysin-III-related XM56_16315 IPR036291 NAD(P)-binding domain superfamily XM56_16315 IPR020904 Short-chain dehydrogenase/reductase, conserved site XM56_16315 IPR002347 Short-chain dehydrogenase/reductase SDR XM56_16325 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 XM56_16325 IPR015424 Pyridoxal phosphate-dependent transferase XM56_16325 IPR015421 Pyridoxal phosphate-dependent transferase, major domain XM56_16325 IPR003437 Glycine dehydrogenase (decarboxylating) XM56_16325 IPR020581 Glycine cleavage system P protein XM56_16330 IPR000089 Biotin/lipoyl attachment XM56_16330 IPR017453 Glycine cleavage system H-protein, subgroup XM56_16330 IPR033753 Glycine cleavage system H-protein/Simiate XM56_16330 IPR002930 Glycine cleavage system H-protein XM56_16330 IPR011053 Single hybrid motif XM56_16330 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site XM56_16335 IPR006223 Glycine cleavage system T protein XM56_16335 IPR006222 Aminomethyltransferase, folate-binding domain XM56_16335 IPR028896 Aminomethyltransferase-like XM56_16335 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain XM56_16335 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal XM56_16335 IPR022903 Glycine cleavage system T protein, bacteria XM56_16335 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 XM56_16340 IPR002938 FAD-binding domain XM56_16340 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site XM56_16340 IPR036188 FAD/NAD(P)-binding domain superfamily XM56_16340 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 XM56_16345 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 XM56_16345 IPR002938 FAD-binding domain XM56_16345 IPR036188 FAD/NAD(P)-binding domain superfamily XM56_16345 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site XM56_16345 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase XM56_16350 IPR000994 Peptidase M24 XM56_16350 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site XM56_16350 IPR036005 Creatinase/aminopeptidase-like XM56_16350 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal XM56_16350 IPR001714 Peptidase M24, methionine aminopeptidase XM56_16350 IPR007865 Aminopeptidase P, N-terminal XM56_16355 IPR036255 YgfB-like superfamily XM56_16355 IPR011978 Uncharacterised protein family UPF0149 XM56_16360 IPR036192 Cell division protein ZapA-like superfamily XM56_16360 IPR007838 Cell division protein ZapA-like XM56_16360 IPR023771 Cell division protein ZapA, eubacteria XM56_16365 IPR002698 5-formyltetrahydrofolate cyclo-ligase XM56_16365 IPR037171 NagB/RpiA transferase-like XM56_16365 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily XM56_16370 IPR020811 Enolase, N-terminal XM56_16370 IPR020810 Enolase, C-terminal TIM barrel domain XM56_16370 IPR029017 Enolase-like, N-terminal XM56_16370 IPR036849 Enolase-like, C-terminal domain superfamily XM56_16370 IPR000941 Enolase XM56_16370 IPR020809 Enolase, conserved site XM56_16375 IPR029062 Class I glutamine amidotransferase-like XM56_16375 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_16375 IPR033828 CTP synthase GATase domain XM56_16375 IPR017926 Glutamine amidotransferase XM56_16375 IPR017456 CTP synthase, N-terminal XM56_16375 IPR004468 CTP synthase XM56_16380 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core XM56_16380 IPR011551 NTP pyrophosphohydrolase MazG XM56_16385 IPR002912 ACT domain XM56_16385 IPR033655 RelA, TGS domain XM56_16385 IPR012676 TGS-like XM56_16385 IPR004095 TGS XM56_16385 IPR007685 RelA/SpoT XM56_16385 IPR004811 RelA/SpoT family XM56_16385 IPR003607 HD/PDEase domain XM56_16385 IPR012675 Beta-grasp domain superfamily XM56_16390 IPR030391 RNA methyltransferase TrmA, conserved site XM56_16390 IPR030390 RNA methyltransferase TrmA, active site XM56_16390 IPR010280 (Uracil-5)-methyltransferase family XM56_16390 IPR002792 TRAM domain XM56_16390 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XM56_16390 IPR012340 Nucleic acid-binding, OB-fold XM56_16390 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD XM56_16395 IPR001789 Signal transduction response regulator, receiver domain XM56_16395 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain XM56_16395 IPR004358 Signal transduction histidine kinase-related protein, C-terminal XM56_16395 IPR036641 HPT domain superfamily XM56_16395 IPR019247 Histidine kinase BarA, N-terminal XM56_16395 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XM56_16395 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain XM56_16395 IPR005467 Histidine kinase domain XM56_16395 IPR003594 Histidine kinase/HSP90-like ATPase XM56_16395 IPR003660 HAMP domain XM56_16395 IPR011006 CheY-like superfamily XM56_16395 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily XM56_16400 IPR001940 Peptidase S1C XM56_16400 IPR009003 Peptidase S1, PA clan XM56_16400 IPR011782 Peptidase S1C, Do XM56_16400 IPR036034 PDZ superfamily XM56_16400 IPR001478 PDZ domain XM56_16405 IPR026875 Phosphohydrolase-associated domain XM56_16405 IPR003607 HD/PDEase domain XM56_16405 IPR020779 dNTP triphosphohydrolase, type 1 XM56_16405 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain superfamily XM56_16405 IPR006674 HD domain XM56_16405 IPR006261 dNTP triphosphohydrolase XM56_16410 IPR010049 MTA/SAH nucleosidase XM56_16410 IPR000845 Nucleoside phosphorylase domain XM56_16410 IPR035994 Nucleoside phosphorylase superfamily XM56_16415 IPR023544 ABC transporter, vitamin B12-binding protein XM56_16415 IPR002491 ABC transporter periplasmic binding domain XM56_16420 IPR005115 Uncharacterised domain UPF0126 XM56_16425 IPR023063 FeS cluster insertion protein ErpA XM56_16425 IPR035903 HesB-like domain superfamily XM56_16425 IPR017870 FeS cluster insertion, C-terminal, conserved site XM56_16425 IPR016092 FeS cluster insertion protein XM56_16425 IPR000361 FeS cluster biogenesis XM56_16430 IPR023861 Chloride channel, ClcA XM56_16430 IPR014743 Chloride channel, core XM56_16430 IPR001807 Chloride channel, voltage gated XM56_16435 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 XM56_16435 IPR015424 Pyridoxal phosphate-dependent transferase XM56_16435 IPR005814 Aminotransferase class-III XM56_16435 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase XM56_16435 IPR015421 Pyridoxal phosphate-dependent transferase, major domain XM56_16440 IPR011701 Major facilitator superfamily XM56_16440 IPR004737 Nitrate transporter XM56_16440 IPR036259 MFS transporter superfamily XM56_16445 IPR037294 ABC transporter, BtuC-like XM56_16445 IPR000522 ABC transporter, permease protein, BtuC-like XM56_16450 IPR002491 ABC transporter periplasmic binding domain XM56_16455 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_16455 IPR003593 AAA+ ATPase domain XM56_16455 IPR003439 ABC transporter-like XM56_16455 IPR017871 ABC transporter, conserved site XM56_16460 IPR012338 Beta-lactamase/transpeptidase-like XM56_16460 IPR001264 Glycosyl transferase, family 51 XM56_16460 IPR028166 Bifunctional transglycosylase second domain XM56_16460 IPR001460 Penicillin-binding protein, transpeptidase XM56_16460 IPR036950 Penicillin binding protein transglycosylase domain XM56_16460 IPR023346 Lysozyme-like domain superfamily XM56_16460 IPR032730 Transglycosylase PBP1b, N-terminal transmembrane domain XM56_16460 IPR011813 Penicillin-binding protein 1B XM56_16465 IPR014001 Helicase superfamily 1/2, ATP-binding domain XM56_16465 IPR007502 Helicase-associated domain XM56_16465 IPR011545 DEAD/DEAH box helicase domain XM56_16465 IPR001650 Helicase, C-terminal XM56_16465 IPR010225 ATP-dependent helicase HrpB XM56_16465 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_16465 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal XM56_16470 IPR009097 Cyclic phosphodiesterase XM56_16470 IPR004175 RNA 2',3'-cyclic phosphodiesterase XM56_16470 IPR014051 Phosphoesterase, HXTX XM56_16475 IPR005224 Sugar fermentation stimulation protein XM56_16475 IPR040452 Sugar fermentation stimulation protein, C-terminal XM56_16475 IPR041465 SfsA, N-terminal OB domain XM56_16480 IPR000962 Zinc finger, DksA/TraR C4-type XM56_16480 IPR020458 Zinc finger, DksA/TraR C4-type conserved site XM56_16480 IPR037187 DksA, N-terminal domain superfamily XM56_16480 IPR012784 RNA polymerase-binding transcription factor DksA XM56_16480 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria XM56_16485 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XM56_16485 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain XM56_16485 IPR000924 Glutamyl/glutaminyl-tRNA synthetase XM56_16485 IPR022380 Glutamyl-Q tRNA(Asp) synthetase XM56_16490 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain XM56_16490 IPR025866 Polymerase A arginine-rich C-terminal domain XM56_16490 IPR010206 Poly(A) polymerase I XM56_16490 IPR002646 Poly A polymerase, head domain XM56_16495 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK XM56_16495 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily XM56_16500 IPR040442 Pyruvate kinase-like domain superfamily XM56_16500 IPR003700 Ketopantoate hydroxymethyltransferase XM56_16500 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily XM56_16505 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XM56_16505 IPR003721 Pantoate-beta-alanine ligase XM56_16505 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain XM56_16510 IPR009010 Aspartate decarboxylase-like domain superfamily XM56_16510 IPR003190 Aspartate decarboxylase XM56_16515 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel XM56_16515 IPR002509 NodB homology domain XM56_16520 IPR013525 ABC-2 type transporter XM56_16520 IPR000412 ABC-2 transporter XM56_16525 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_16525 IPR003593 AAA+ ATPase domain XM56_16525 IPR003439 ABC transporter-like XM56_16525 IPR017871 ABC transporter, conserved site XM56_16530 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site XM56_16530 IPR036874 Carbonic anhydrase superfamily XM56_16530 IPR001765 Carbonic anhydrase XM56_16535 IPR029057 Phosphoribosyltransferase-like XM56_16535 IPR000836 Phosphoribosyltransferase domain XM56_16535 IPR005904 Hypoxanthine phosphoribosyl transferase XM56_16540 IPR011706 Multicopper oxidase, type 2 XM56_16540 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal XM56_16540 IPR006311 Twin-arginine translocation pathway, signal sequence XM56_16540 IPR008972 Cupredoxin XM56_16540 IPR002355 Multicopper oxidase, copper-binding site XM56_16540 IPR011707 Multicopper oxidase, type 3 XM56_16540 IPR001117 Multicopper oxidase, type 1 XM56_16545 IPR019114 Chaperone lipoprotein, PulS/OutS-like XM56_16545 IPR038432 PulS/OutS-like superfamily XM56_16550 IPR030374 Polyamine biosynthesis domain XM56_16550 IPR037163 Spermidine synthase, tetramerisation domain superfamily XM56_16550 IPR035246 Spermidine synthase, tetramerisation domain XM56_16550 IPR001045 Spermidine/spermine synthases XM56_16550 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XM56_16550 IPR030373 Polyamine biosynthesis domain, conserved site XM56_16555 IPR016067 S-adenosylmethionine decarboxylase, core XM56_16555 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic XM56_16555 IPR009165 S-adenosylmethionine decarboxylase, bacterial XM56_16560 IPR041256 CDI immunity protein XM56_16565 IPR000620 EamA domain XM56_16570 IPR008249 Uncharacterised protein family UPF0231 XM56_16575 IPR015929 Aconitase B, swivel XM56_16575 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain XM56_16575 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel XM56_16575 IPR018136 Aconitase family, 4Fe-4S cluster binding site XM56_16575 IPR015932 Aconitase, domain 2 XM56_16575 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 XM56_16575 IPR015933 Aconitase B, HEAT-like domain XM56_16575 IPR004406 Aconitase B XM56_16575 IPR036008 Aconitase, iron-sulfur domain XM56_16575 IPR036288 Aconitase B, HEAT-like domain superfamily XM56_16580 IPR039426 Vitamin B12 transporter BtuB-like XM56_16580 IPR037066 TonB-dependent receptor, plug domain superfamily XM56_16580 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily XM56_16580 IPR010917 TonB-dependent receptor, conserved site XM56_16580 IPR012910 TonB-dependent receptor, plug domain XM56_16580 IPR000531 TonB-dependent receptor-like, beta-barrel XM56_16580 IPR010105 TonB-dependent siderophore receptor XM56_16585 IPR018062 HTH domain AraC-type, conserved site XM56_16585 IPR029062 Class I glutamine amidotransferase-like XM56_16585 IPR009057 Homeobox-like domain superfamily XM56_16585 IPR002818 DJ-1/PfpI XM56_16585 IPR020449 Transcription regulator HTH, AraC- type XM56_16585 IPR018060 DNA binding HTH domain, AraC-type XM56_16595 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain XM56_16595 IPR036188 FAD/NAD(P)-binding domain superfamily XM56_16595 IPR006258 Dihydrolipoamide dehydrogenase XM56_16595 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site XM56_16595 IPR023753 FAD/NAD(P)-binding domain XM56_16595 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily XM56_16595 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I XM56_16600 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex XM56_16600 IPR000089 Biotin/lipoyl attachment XM56_16600 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily XM56_16600 IPR004167 Peripheral subunit-binding domain XM56_16600 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site XM56_16600 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain XM56_16600 IPR011053 Single hybrid motif XM56_16600 IPR036625 E3-binding domain superfamily XM56_16605 IPR005474 Transketolase, N-terminal XM56_16605 IPR004660 Pyruvate dehydrogenase E1 component XM56_16605 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal XM56_16605 IPR041621 Pyruvate dehydrogenase E1 component, middle domain XM56_16605 IPR029061 Thiamin diphosphate-binding fold XM56_16605 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II XM56_16610 IPR008920 Transcription regulator FadR/GntR, C-terminal XM56_16610 IPR000524 Transcription regulator HTH, GntR XM56_16610 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_16610 IPR036390 Winged helix DNA-binding domain superfamily XM56_16610 IPR011711 GntR, C-terminal XM56_16615 IPR004840 Amino acid permease, conserved site XM56_16615 IPR004841 Amino acid permease/ SLC12A domain XM56_16620 IPR031347 Protein AmpE XM56_16625 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily XM56_16625 IPR002502 N-acetylmuramoyl-L-alanine amidase domain XM56_16630 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal XM56_16630 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily XM56_16630 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD XM56_16630 IPR013785 Aldolase-type TIM barrel XM56_16630 IPR004393 Nicotinate-nucleotide pyrophosphorylase XM56_16630 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal XM56_16630 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal XM56_16635 IPR012902 Prokaryotic N-terminal methylation site XM56_16640 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_16640 IPR001482 Type II/IV secretion system protein XM56_16640 IPR007831 General secretory system II, protein E, N-terminal XM56_16645 IPR018076 Type II secretion system F domain XM56_16645 IPR001992 Type II secretion system conserved site XM56_16645 IPR003004 GspF/PilC family XM56_16645 IPR042094 Type II secretion system F domain superfamily XM56_16650 IPR005993 GMP reductase XM56_16650 IPR015875 IMP dehydrogenase / GMP reductase, conserved site XM56_16650 IPR013785 Aldolase-type TIM barrel XM56_16650 IPR001093 IMP dehydrogenase/GMP reductase XM56_16655 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_16655 IPR001977 Dephospho-CoA kinase XM56_16660 IPR027462 Z ring-associated protein D, C-terminal XM56_16660 IPR009777 Cell division protein ZapD XM56_16660 IPR036268 ZapD domain superfamily XM56_16665 IPR005584 DNA gyrase inhibitor YacG XM56_16665 IPR013088 Zinc finger, NHR/GATA-type XM56_16670 IPR015797 NUDIX hydrolase-like domain superfamily XM56_16670 IPR020084 NUDIX hydrolase, conserved site XM56_16670 IPR003561 Mutator MutT XM56_16670 IPR000086 NUDIX hydrolase domain XM56_16670 IPR020476 NUDIX hydrolase XM56_16675 IPR036266 SecA, Wing/Scaffold superfamily XM56_16675 IPR011130 SecA, preprotein cross-linking domain XM56_16675 IPR004027 SEC-C motif XM56_16675 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_16675 IPR000185 Protein translocase subunit SecA XM56_16675 IPR020937 SecA conserved site XM56_16675 IPR036670 SecA, preprotein cross-linking domain superfamily XM56_16675 IPR011115 SecA DEAD-like, N-terminal XM56_16675 IPR011116 SecA Wing/Scaffold XM56_16675 IPR014018 SecA motor DEAD XM56_16680 IPR009502 Secretion monitor XM56_16690 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase XM56_16690 IPR020568 Ribosomal protein S5 domain 2-type fold XM56_16690 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal XM56_16690 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal XM56_16695 IPR008280 Tubulin/FtsZ, C-terminal XM56_16695 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain XM56_16695 IPR024757 Cell division protein FtsZ, C-terminal XM56_16695 IPR000158 Cell division protein FtsZ XM56_16695 IPR020805 Cell division protein FtsZ, conserved site XM56_16695 IPR003008 Tubulin/FtsZ, GTPase domain XM56_16695 IPR036525 Tubulin/FtsZ, GTPase domain superfamily XM56_16700 IPR003494 SHS2 domain inserted in FtsA XM56_16700 IPR020823 Cell division protein FtsA XM56_16705 IPR005548 Cell division protein FtsQ/DivIB XM56_16705 IPR034746 POTRA domain XM56_16705 IPR013685 POTRA domain, FtsQ-type XM56_16705 IPR026579 Cell division protein FtsQ XM56_16710 IPR005905 D-alanine--D-alanine ligase XM56_16710 IPR011095 D-alanine--D-alanine ligase, C-terminal XM56_16710 IPR011127 D-alanine--D-alanine ligase, N-terminal domain XM56_16710 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site XM56_16710 IPR016185 Pre-ATP-grasp domain superfamily XM56_16710 IPR011761 ATP-grasp fold XM56_16710 IPR013815 ATP-grasp fold, subdomain 1 XM56_16715 IPR036615 Mur ligase, C-terminal domain superfamily XM56_16715 IPR005758 UDP-N-acetylmuramate--L-alanine ligase XM56_16715 IPR000713 Mur ligase, N-terminal catalytic domain XM56_16715 IPR013221 Mur ligase, central XM56_16715 IPR036565 Mur-like, catalytic domain superfamily XM56_16715 IPR004101 Mur ligase, C-terminal XM56_16720 IPR007235 Glycosyl transferase, family 28, C-terminal XM56_16720 IPR006009 N-acetylglucosaminyltransferase, MurG XM56_16720 IPR004276 Glycosyltransferase family 28, N-terminal domain XM56_16725 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site XM56_16725 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA XM56_16725 IPR013437 Probable peptidoglycan glycosyltransferase FtsW XM56_16730 IPR036565 Mur-like, catalytic domain superfamily XM56_16730 IPR004101 Mur ligase, C-terminal XM56_16730 IPR036615 Mur ligase, C-terminal domain superfamily XM56_16730 IPR013221 Mur ligase, central XM56_16730 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase XM56_16735 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site XM56_16735 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase XM56_16735 IPR000715 Glycosyl transferase, family 4 XM56_16740 IPR000713 Mur ligase, N-terminal catalytic domain XM56_16740 IPR035911 MurE/MurF, N-terminal XM56_16740 IPR036615 Mur ligase, C-terminal domain superfamily XM56_16740 IPR004101 Mur ligase, C-terminal XM56_16740 IPR036565 Mur-like, catalytic domain superfamily XM56_16740 IPR013221 Mur ligase, central XM56_16740 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase XM56_16745 IPR036615 Mur ligase, C-terminal domain superfamily XM56_16745 IPR013221 Mur ligase, central XM56_16745 IPR000713 Mur ligase, N-terminal catalytic domain XM56_16745 IPR035911 MurE/MurF, N-terminal XM56_16745 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase XM56_16745 IPR004101 Mur ligase, C-terminal XM56_16745 IPR036565 Mur-like, catalytic domain superfamily XM56_16750 IPR012338 Beta-lactamase/transpeptidase-like XM56_16750 IPR005311 Penicillin-binding protein, dimerisation domain XM56_16750 IPR037532 Peptidoglycan D,D-transpeptidase FtsI XM56_16750 IPR036138 Penicillin-binding protein, dimerisation domain superfamily XM56_16750 IPR001460 Penicillin-binding protein, transpeptidase XM56_16755 IPR011922 Cell division protein FtsL XM56_16760 IPR002903 Ribosomal RNA small subunit methyltransferase H XM56_16760 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily XM56_16760 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XM56_16765 IPR037914 SpoVT-AbrB domain superfamily XM56_16765 IPR003444 Transcriptional regulator MraZ XM56_16765 IPR035644 MraZ, C-terminal XM56_16765 IPR035642 MraZ, N-terminal XM56_16765 IPR038619 MraZ superfamily XM56_16765 IPR007159 SpoVT-AbrB domain XM56_16765 IPR020603 MraZ domain XM56_16775 IPR010574 L-alanine exporter AlaE XM56_16780 IPR028082 Periplasmic binding protein-like I XM56_16780 IPR001761 Periplasmic binding protein/LacI sugar binding domain XM56_16780 IPR010982 Lambda repressor-like, DNA-binding domain superfamily XM56_16780 IPR000843 LacI-type HTH domain XM56_16780 IPR012781 D-fructose-responsive transcription factor XM56_16785 IPR019455 Acetolactate synthase, small subunit, C-terminal XM56_16785 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal XM56_16785 IPR002912 ACT domain XM56_16785 IPR039557 AHAS, ACT domain XM56_16785 IPR004789 Acetolactate synthase, small subunit XM56_16790 IPR039368 Acetolactate synthase large subunit, TPP binding domain XM56_16790 IPR029035 DHS-like NAD/FAD-binding domain superfamily XM56_16790 IPR029061 Thiamin diphosphate-binding fold XM56_16790 IPR012000 Thiamine pyrophosphate enzyme, central domain XM56_16790 IPR012846 Acetolactate synthase, large subunit, biosynthetic XM56_16790 IPR000399 TPP-binding enzyme, conserved site XM56_16790 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding XM56_16790 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain XM56_16795 IPR020845 AMP-binding, conserved site XM56_16795 IPR042099 AMP-dependent synthetase-like superfamily XM56_16795 IPR000873 AMP-dependent synthetase/ligase XM56_16800 IPR000847 Transcription regulator HTH, LysR XM56_16800 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_16800 IPR005119 LysR, substrate-binding XM56_16800 IPR036390 Winged helix DNA-binding domain superfamily XM56_16805 IPR000891 Pyruvate carboxyltransferase XM56_16805 IPR005671 2-isopropylmalate synthase, bacterial-type XM56_16805 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily XM56_16805 IPR013785 Aldolase-type TIM barrel XM56_16805 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site XM56_16805 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain XM56_16810 IPR024084 Isopropylmalate dehydrogenase-like domain XM56_16810 IPR004429 Isopropylmalate dehydrogenase XM56_16810 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site XM56_16815 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 XM56_16815 IPR004430 3-isopropylmalate dehydratase, large subunit XM56_16815 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain XM56_16815 IPR018136 Aconitase family, 4Fe-4S cluster binding site XM56_16815 IPR036008 Aconitase, iron-sulfur domain XM56_16815 IPR033941 3-Isopropylmalate dehydratase, catalytic domain XM56_16820 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain XM56_16820 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel XM56_16820 IPR004431 3-isopropylmalate dehydratase, small subunit XM56_16820 IPR033940 3-isopropylmalate dehydratase, swivel domain XM56_16830 IPR011166 Beta-eliminating lyase family XM56_16830 IPR015424 Pyridoxal phosphate-dependent transferase XM56_16830 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 XM56_16830 IPR018176 Tryptophanase, conserved site XM56_16830 IPR013440 Tryptophanase XM56_16830 IPR015421 Pyridoxal phosphate-dependent transferase, major domain XM56_16830 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase XM56_16835 IPR013059 Tryptophan/tyrosine transporter XM56_16835 IPR013061 Tryptophan/tryrosine permease, conserved site XM56_16835 IPR018227 Amino acid/polyamine transporter 2 XM56_16845 IPR004750 Sugar efflux XM56_16845 IPR011701 Major facilitator superfamily XM56_16845 IPR020846 Major facilitator superfamily domain XM56_16845 IPR036259 MFS transporter superfamily XM56_16855 IPR034465 Pyruvate formate-lyase activase XM56_16855 IPR007197 Radical SAM XM56_16855 IPR001989 Radical-activating enzyme, conserved site XM56_16855 IPR012839 Organic radical enzyme activase XM56_16855 IPR034457 Organic radical-activating enzymes XM56_16855 IPR013785 Aldolase-type TIM barrel XM56_16860 IPR000914 Solute-binding protein family 5 domain XM56_16860 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain XM56_16860 IPR023767 Transcriptional regulator SgrR XM56_16860 IPR036390 Winged helix DNA-binding domain superfamily XM56_16860 IPR039424 Solute-binding protein family 5 XM56_16875 IPR006061 Solute-binding family 1, conserved site XM56_16875 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria XM56_16875 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter XM56_16880 IPR005947 Thiamine ABC transporter, permease protein XM56_16880 IPR035906 MetI-like superfamily XM56_16880 IPR000515 ABC transporter type 1, transmembrane domain MetI-like XM56_16885 IPR003593 AAA+ ATPase domain XM56_16885 IPR003439 ABC transporter-like XM56_16885 IPR017871 ABC transporter, conserved site XM56_16885 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ XM56_16885 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_16890 IPR032816 SNARE associated Golgi protein XM56_16890 IPR032818 DedA family XM56_16895 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain XM56_16895 IPR042087 DNA polymerase family B, C-terminal domain XM56_16895 IPR023211 DNA polymerase, palm domain superfamily XM56_16895 IPR012337 Ribonuclease H-like superfamily XM56_16895 IPR036397 Ribonuclease H superfamily XM56_16895 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain XM56_16895 IPR017964 DNA-directed DNA polymerase, family B, conserved site XM56_16895 IPR006172 DNA-directed DNA polymerase, family B XM56_16900 IPR038718 SNF2-like, N-terminal domain superfamily XM56_16900 IPR022737 RNA polymerase recycling, bacterial, C-terminal XM56_16900 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_16900 IPR000330 SNF2-related, N-terminal domain XM56_16900 IPR014001 Helicase superfamily 1/2, ATP-binding domain XM56_16900 IPR023949 RNA polymerase-associated protein RapA XM56_16900 IPR001650 Helicase, C-terminal XM56_16900 IPR040765 RapA, N-terminal Tudor like domain 1 XM56_16900 IPR040766 RapA, N-terminal Tudor-like domain 2 XM56_16905 IPR022409 PKD/Chitinase domain XM56_16905 IPR003344 Big-1 (bacterial Ig-like domain 1) domain XM56_16905 IPR024519 Inverse autotransporter, beta-domain XM56_16905 IPR038177 Inverse autotransporter, beta-domain superfamily XM56_16905 IPR013783 Immunoglobulin-like fold XM56_16905 IPR003535 Intimin/invasin bacterial adhesion mediator protein XM56_16905 IPR008964 Invasin/intimin cell-adhesion fragments XM56_16905 IPR015217 Invasin, domain 3 XM56_16905 IPR018392 LysM domain XM56_16910 IPR020103 Pseudouridine synthase, catalytic domain superfamily XM56_16910 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site XM56_16910 IPR006145 Pseudouridine synthase, RsuA/RluA XM56_16915 IPR023749 Co-chaperone DjlA XM56_16915 IPR036869 Chaperone J-domain superfamily XM56_16915 IPR001623 DnaJ domain XM56_16915 IPR007791 Co-chaperone DjlA, N-terminal XM56_16915 IPR029024 TerB-like XM56_16920 IPR020889 LPS-assembly protein LptD XM56_16920 IPR005653 Organic solvent tolerance-like, N-terminal XM56_16920 IPR007543 LptD, C-terminal XM56_16925 IPR015391 SurA N-terminal XM56_16925 IPR027304 Trigger factor/SurA domain superfamily XM56_16925 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type XM56_16925 IPR023034 Peptidyl-prolyl isomerase SurA XM56_16930 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase XM56_16930 IPR005255 PdxA family XM56_16935 IPR023165 rRNA adenine dimethylase-like XM56_16935 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm XM56_16935 IPR011530 Ribosomal RNA adenine dimethylase XM56_16935 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site XM56_16935 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal XM56_16935 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XM56_16940 IPR023065 Uncharacterised protein family ApaG XM56_16940 IPR036767 ApaG domain superfamily XM56_16940 IPR007474 ApaG domain XM56_16945 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) XM56_16945 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type XM56_16945 IPR029052 Metallo-dependent phosphatase-like XM56_16950 IPR001796 Dihydrofolate reductase domain XM56_16950 IPR017925 Dihydrofolate reductase conserved site XM56_16950 IPR012259 Dihydrofolate reductase XM56_16950 IPR024072 Dihydrofolate reductase-like domain superfamily XM56_16955 IPR024528 Threonine/Serine exporter, ThrE XM56_16955 IPR020914 Uncharacterised protein family UPF0442 XM56_16960 IPR010619 Putative threonine/serine exporter XM56_16965 IPR001123 Amino acid exporter protein, LeuE-type XM56_16965 IPR004778 Homoserine/Threonine efflux protein XM56_16970 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain XM56_16970 IPR011607 Methylglyoxal synthase-like domain XM56_16970 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain XM56_16970 IPR011761 ATP-grasp fold XM56_16970 IPR006275 Carbamoyl-phosphate synthase, large subunit XM56_16970 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain XM56_16970 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily XM56_16970 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain XM56_16970 IPR036914 Methylglyoxal synthase-like domain superfamily XM56_16970 IPR016185 Pre-ATP-grasp domain superfamily XM56_16975 IPR029062 Class I glutamine amidotransferase-like XM56_16975 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain XM56_16975 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily XM56_16975 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain XM56_16975 IPR017926 Glutamine amidotransferase XM56_16975 IPR006274 Carbamoyl-phosphate synthase, small subunit XM56_16980 IPR022664 Dihydrodipicolinate reductase, conserved site XM56_16980 IPR023940 Dihydrodipicolinate reductase XM56_16980 IPR022663 Dihydrodipicolinate reductase, C-terminal XM56_16980 IPR000846 Dihydrodipicolinate reductase, N-terminal XM56_16980 IPR036291 NAD(P)-binding domain superfamily XM56_16985 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase XM56_16990 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain XM56_16995 IPR001872 Peptidase A8, signal peptidase II XM56_17000 IPR023585 Isoleucine-tRNA ligase, type 1 XM56_17000 IPR002301 Isoleucine-tRNA ligase XM56_17000 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain XM56_17000 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XM56_17000 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding XM56_17000 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain XM56_17000 IPR002300 Aminoacyl-tRNA synthetase, class Ia XM56_17000 IPR010663 Zinc finger, FPG/IleRS-type XM56_17000 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site XM56_17000 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding XM56_17005 IPR015864 FAD synthetase XM56_17005 IPR023468 Riboflavin kinase XM56_17005 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic XM56_17005 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XM56_17005 IPR023465 Riboflavin kinase domain superfamily XM56_17005 IPR002606 Riboflavin kinase, bacterial XM56_17015 IPR002583 Ribosomal protein S20 XM56_17015 IPR036510 Ribosomal protein S20 superfamily XM56_17020 IPR005119 LysR, substrate-binding XM56_17020 IPR000847 Transcription regulator HTH, LysR XM56_17020 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_17020 IPR036390 Winged helix DNA-binding domain superfamily XM56_17025 IPR023171 Na/H antiporter domain superfamily XM56_17025 IPR004670 Na+/H+ antiporter NhaA XM56_17030 IPR001305 Heat shock protein DnaJ, cysteine-rich domain XM56_17030 IPR008971 HSP40/DnaJ peptide-binding XM56_17030 IPR018253 DnaJ domain, conserved site XM56_17030 IPR001623 DnaJ domain XM56_17030 IPR002939 Chaperone DnaJ, C-terminal XM56_17030 IPR012724 Chaperone DnaJ XM56_17030 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily XM56_17030 IPR036869 Chaperone J-domain superfamily XM56_17035 IPR012725 Chaperone DnaK XM56_17035 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily XM56_17035 IPR018181 Heat shock protein 70, conserved site XM56_17035 IPR013126 Heat shock protein 70 family XM56_17035 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily XM56_17040 IPR000791 Acetate transporter GPR1/FUN34/SatP family XM56_17050 IPR020846 Major facilitator superfamily domain XM56_17050 IPR005829 Sugar transporter, conserved site XM56_17050 IPR036259 MFS transporter superfamily XM56_17050 IPR011701 Major facilitator superfamily XM56_17055 IPR036425 MoaB/Mog-like domain superfamily XM56_17055 IPR001453 MoaB/Mog domain XM56_17055 IPR008284 Molybdenum cofactor biosynthesis, conserved site XM56_17060 IPR004730 Transaldolase type 1 XM56_17060 IPR001585 Transaldolase/Fructose-6-phosphate aldolase XM56_17060 IPR013785 Aldolase-type TIM barrel XM56_17060 IPR018225 Transaldolase, active site XM56_17065 IPR005583 Peroxide stress protein YaaA XM56_17075 IPR037158 Threonine synthase, N-terminal domain superfamily XM56_17075 IPR004450 Threonine synthase-like XM56_17075 IPR001926 Pyridoxal-phosphate dependent enzyme XM56_17075 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme XM56_17075 IPR029144 Threonine synthase, N-terminal XM56_17075 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site XM56_17080 IPR006203 GHMP kinase, ATP-binding, conserved site XM56_17080 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup XM56_17080 IPR020568 Ribosomal protein S5 domain 2-type fold XM56_17080 IPR000870 Homoserine kinase XM56_17080 IPR006204 GHMP kinase N-terminal domain XM56_17080 IPR036554 GHMP kinase, C-terminal domain superfamily XM56_17080 IPR013750 GHMP kinase, C-terminal domain XM56_17085 IPR001342 Homoserine dehydrogenase, catalytic XM56_17085 IPR019811 Homoserine dehydrogenase, conserved site XM56_17085 IPR001341 Aspartate kinase XM56_17085 IPR018042 Aspartate kinase, conserved site XM56_17085 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding XM56_17085 IPR001048 Aspartate/glutamate/uridylate kinase XM56_17085 IPR041743 Bifunctional aspartokinase/homoserine dehydrogenase, N-terminal catalytic domain XM56_17085 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I XM56_17085 IPR002912 ACT domain XM56_17085 IPR027795 CASTOR, ACT domain XM56_17085 IPR036393 Acetylglutamate kinase-like superfamily XM56_17085 IPR036291 NAD(P)-binding domain superfamily XM56_17095 IPR016032 Signal transduction response regulator, C-terminal effector XM56_17095 IPR001789 Signal transduction response regulator, receiver domain XM56_17095 IPR039420 Transcriptional regulatory protein WalR-like XM56_17095 IPR011006 CheY-like superfamily XM56_17095 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_17095 IPR001867 OmpR/PhoB-type DNA-binding domain XM56_17100 IPR010292 Uncharacterised protein family CreA XM56_17105 IPR018060 DNA binding HTH domain, AraC-type XM56_17105 IPR020449 Transcription regulator HTH, AraC- type XM56_17105 IPR011256 Regulatory factor, effector binding domain superfamily XM56_17105 IPR009057 Homeobox-like domain superfamily XM56_17105 IPR018062 HTH domain AraC-type, conserved site XM56_17105 IPR029442 GyrI-like small molecule binding domain XM56_17105 IPR010499 Bacterial transcription activator, effector binding XM56_17110 IPR023086 Phosphoglycerate mutase, GpmB, probable XM56_17110 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site XM56_17110 IPR013078 Histidine phosphatase superfamily, clade-1 XM56_17110 IPR029033 Histidine phosphatase superfamily XM56_17115 IPR002786 Inosine/xanthosine triphosphatase XM56_17115 IPR029001 Inosine triphosphate pyrophosphatase-like XM56_17115 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 XM56_17120 IPR038116 TrpR-like superfamily XM56_17120 IPR010921 Trp repressor/replication initiator XM56_17120 IPR000831 Trp repressor XM56_17120 IPR013335 Trp repressor, bacterial XM56_17125 IPR008939 Lytic transglycosylase, superhelical U-shaped XM56_17125 IPR012289 Lytic transglycosylase, superhelical linker XM56_17125 IPR000189 Prokaryotic transglycosylase, active site XM56_17125 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily XM56_17125 IPR008258 Transglycosylase SLT domain 1 XM56_17125 IPR023346 Lysozyme-like domain superfamily XM56_17130 IPR001757 P-type ATPase XM56_17130 IPR018303 P-type ATPase, phosphorylation site XM56_17130 IPR023299 P-type ATPase, cytoplasmic domain N XM56_17130 IPR006068 Cation-transporting P-type ATPase, C-terminal XM56_17130 IPR004014 Cation-transporting P-type ATPase, N-terminal XM56_17130 IPR023298 P-type ATPase, transmembrane domain superfamily XM56_17130 IPR036412 HAD-like superfamily XM56_17130 IPR008250 P-type ATPase, A domain superfamily XM56_17130 IPR023214 HAD superfamily XM56_17140 IPR029787 Nucleotide cyclase XM56_17140 IPR003660 HAMP domain XM56_17140 IPR000160 GGDEF domain XM56_17140 IPR033417 Periplasmic sensor domain CHASE8 XM56_17145 IPR006664 Outer membrane protein, bacterial XM56_17145 IPR036737 OmpA-like domain superfamily XM56_17145 IPR006665 OmpA-like domain XM56_17150 IPR003593 AAA+ ATPase domain XM56_17150 IPR032781 ABC-transporter extension domain XM56_17150 IPR003439 ABC transporter-like XM56_17150 IPR017871 ABC transporter, conserved site XM56_17150 IPR022374 Energy-dependent translational throttle protein EttA XM56_17150 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_17160 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_17160 IPR036390 Winged helix DNA-binding domain superfamily XM56_17160 IPR005119 LysR, substrate-binding XM56_17160 IPR000847 Transcription regulator HTH, LysR XM56_17165 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site XM56_17165 IPR036291 NAD(P)-binding domain superfamily XM56_17165 IPR020843 Polyketide synthase, enoylreductase domain XM56_17165 IPR013154 Alcohol dehydrogenase, N-terminal XM56_17165 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 XM56_17165 IPR011032 GroES-like superfamily XM56_17165 IPR013149 Alcohol dehydrogenase, C-terminal XM56_17170 IPR006417 Nicotinamide-nucleotide adenylyltransferase XM56_17170 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_17170 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XM56_17170 IPR041749 NadR, nicotinamide/nicotinate mononucleotide adenylyltransferase domain XM56_17170 IPR038727 NadR/Ttd14, AAA domain XM56_17170 IPR004821 Cytidyltransferase-like domain XM56_17170 IPR010982 Lambda repressor-like, DNA-binding domain superfamily XM56_17170 IPR001387 Cro/C1-type helix-turn-helix domain XM56_17170 IPR016429 NAD biosynthesis/regulator protein NadR XM56_17175 IPR004504 DNA repair protein RadA XM56_17175 IPR020568 Ribosomal protein S5 domain 2-type fold XM56_17175 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain XM56_17175 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup XM56_17175 IPR041166 LapB, rubredoxin metal binding domain XM56_17175 IPR003593 AAA+ ATPase domain XM56_17175 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_17180 IPR023190 Phosphoserine phosphatase, domain 2 XM56_17180 IPR023214 HAD superfamily XM56_17180 IPR041449 Phosphoserine phosphatase, N-terminal XM56_17180 IPR036412 HAD-like superfamily XM56_17185 IPR019305 Uncharacterised protein family Smp XM56_17190 IPR035994 Nucleoside phosphorylase superfamily XM56_17190 IPR018016 Nucleoside phosphorylase, conserved site XM56_17190 IPR004402 Purine nucleoside phosphorylase DeoD-type XM56_17190 IPR000845 Nucleoside phosphorylase domain XM56_17195 IPR017850 Alkaline-phosphatase-like, core domain superfamily XM56_17195 IPR006124 Metalloenzyme XM56_17195 IPR024052 Phosphopentomutase DeoB cap domain superfamily XM56_17195 IPR010045 Phosphopentomutase XM56_17200 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily XM56_17200 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily XM56_17200 IPR000312 Glycosyl transferase, family 3 XM56_17200 IPR017459 Glycosyl transferase family 3, N-terminal domain XM56_17200 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase XM56_17200 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal XM56_17200 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site XM56_17200 IPR013465 Thymidine phosphorylase XM56_17200 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily XM56_17200 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic XM56_17205 IPR011343 Deoxyribose-phosphate aldolase XM56_17205 IPR023649 Deoxyribose-phosphate aldolase type II XM56_17205 IPR002915 DeoC/FbaB/ lacD aldolase XM56_17205 IPR013785 Aldolase-type TIM barrel XM56_17210 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial XM56_17210 IPR008276 Concentrative nucleoside transporter XM56_17210 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain XM56_17210 IPR002668 Concentrative nucleoside transporter N-terminal domain XM56_17210 IPR011657 Concentrative nucleoside transporter C-terminal domain XM56_17215 IPR018228 Deoxyribonuclease, TatD-related, conserved site XM56_17215 IPR032466 Metal-dependent hydrolase XM56_17215 IPR001130 TatD family XM56_17220 IPR002641 Patatin-like phospholipase domain XM56_17220 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase XM56_17220 IPR037483 YjjU-like XM56_17225 IPR007055 BON domain XM56_17225 IPR014004 Transport-associated and nodulation domain, bacteria XM56_17230 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily XM56_17230 IPR004161 Translation elongation factor EFTu-like, domain 2 XM56_17230 IPR031157 Tr-type G domain, conserved site XM56_17230 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_17230 IPR004548 Peptide chain release factor 3 XM56_17230 IPR032090 Peptide chain release factor 3, C-terminal XM56_17230 IPR041732 Peptide chain release factor 3, GTP-binding domain XM56_17230 IPR005225 Small GTP-binding protein domain XM56_17230 IPR000795 Transcription factor, GTP-binding domain XM56_17230 IPR009000 Translation protein, beta-barrel domain superfamily XM56_17230 IPR035647 EF-G domain III/V-like XM56_17235 IPR000182 GNAT domain XM56_17235 IPR016181 Acyl-CoA N-acyltransferase XM56_17235 IPR006464 N-acetyltransferase RimI/Ard1 XM56_17240 IPR018382 DNA polymerase III, psi subunit, subgroup XM56_17240 IPR036654 DNA polymerase III, psi subunit superfamily XM56_17240 IPR004615 DNA polymerase III, psi subunit XM56_17245 IPR023543 rRNA small subunit methyltransferase C XM56_17245 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XM56_17245 IPR002052 DNA methylase, N-6 adenine-specific, conserved site XM56_17245 IPR007848 Methyltransferase small domain XM56_17245 IPR013675 Methyltransferase small, N-terminal XM56_17250 IPR018170 Aldo/keto reductase, conserved site XM56_17250 IPR023210 NADP-dependent oxidoreductase domain XM56_17250 IPR020471 Aldo/keto reductase XM56_17250 IPR036812 NADP-dependent oxidoreductase domain superfamily XM56_17255 IPR000847 Transcription regulator HTH, LysR XM56_17255 IPR036390 Winged helix DNA-binding domain superfamily XM56_17255 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_17255 IPR005119 LysR, substrate-binding XM56_17265 IPR009885 Protein of unknown function DUF1435 XM56_17270 IPR000160 GGDEF domain XM56_17270 IPR039435 Diguanylate cyclase DosC, globin sensor domain XM56_17270 IPR029787 Nucleotide cyclase XM56_17270 IPR012292 Globin/Protoglobin XM56_17270 IPR009050 Globin-like superfamily XM56_17275 IPR011662 Secretin/TonB, short N-terminal domain XM56_17275 IPR010917 TonB-dependent receptor, conserved site XM56_17275 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily XM56_17275 IPR010105 TonB-dependent siderophore receptor XM56_17275 IPR000531 TonB-dependent receptor-like, beta-barrel XM56_17275 IPR037066 TonB-dependent receptor, plug domain superfamily XM56_17275 IPR010916 TonB box, conserved site XM56_17275 IPR012910 TonB-dependent receptor, plug domain XM56_17285 IPR029056 Ribokinase-like XM56_17285 IPR002139 Ribokinase/fructokinase XM56_17285 IPR011611 Carbohydrate kinase PfkB XM56_17285 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site XM56_17290 IPR036998 Porin, LamB-type superfamily XM56_17290 IPR003192 Porin, LamB-type XM56_17290 IPR021570 LamB-type porin N-terminal domain XM56_17295 IPR010973 Phosphotransferase system, sucrose-specific IIBC component XM56_17295 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site XM56_17295 IPR003352 Phosphotransferase system, EIIC XM56_17295 IPR013013 Phosphotransferase system, EIIC component, type 1 XM56_17295 IPR001996 Phosphotransferase system, IIB component, type 1 XM56_17295 IPR036878 Glucose permease domain IIB XM56_17295 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component XM56_17300 IPR018053 Glycoside hydrolase, family 32, active site XM56_17300 IPR001362 Glycoside hydrolase, family 32 XM56_17300 IPR006232 Sucrose-6-phosphate hydrolase XM56_17300 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily XM56_17300 IPR013148 Glycosyl hydrolase family 32, N-terminal XM56_17300 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily XM56_17300 IPR013189 Glycosyl hydrolase family 32, C-terminal XM56_17305 IPR025997 Periplasmic binding protein XM56_17305 IPR028082 Periplasmic binding protein-like I XM56_17305 IPR012781 D-fructose-responsive transcription factor XM56_17305 IPR010982 Lambda repressor-like, DNA-binding domain superfamily XM56_17305 IPR000843 LacI-type HTH domain XM56_17310 IPR002078 RNA polymerase sigma factor 54 interaction domain XM56_17310 IPR035965 PAS domain superfamily XM56_17310 IPR003593 AAA+ ATPase domain XM56_17310 IPR029016 GAF-like domain superfamily XM56_17310 IPR013767 PAS fold XM56_17310 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 XM56_17310 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 XM56_17310 IPR009057 Homeobox-like domain superfamily XM56_17310 IPR002197 DNA binding HTH domain, Fis-type XM56_17310 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_17310 IPR000014 PAS domain XM56_17315 IPR000070 Pectinesterase, catalytic XM56_17315 IPR011050 Pectin lyase fold/virulence factor XM56_17315 IPR012334 Pectin lyase fold XM56_17315 IPR033131 Pectinesterase, Asp active site XM56_17340 IPR031730 Carbamoyltransferase, C-terminal XM56_17340 IPR003696 Carbamoyltransferase XM56_17340 IPR038152 Carbamoyltransferase, C-terminal domain superfamily XM56_17350 IPR036618 PtsI, HPr-binding domain superfamily XM56_17350 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily XM56_17350 IPR004701 Phosphotransferase system, mannose-type IIA component XM56_17350 IPR008731 Phosphotransferase system, enzyme I N-terminal XM56_17350 IPR036637 Phosphohistidine domain superfamily XM56_17350 IPR039643 Dihydroxyacetone kinase phosphotransferase subunit DhaM XM56_17350 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site XM56_17350 IPR000032 Phosphocarrier protein HPr-like XM56_17350 IPR012844 Dihydroxyacetone kinase phosphotransferase subunit, N-terminal domain XM56_17350 IPR035895 HPr-like superfamily XM56_17350 IPR008279 PEP-utilising enzyme, mobile domain XM56_17355 IPR036117 DhaL domain superfamily XM56_17355 IPR012737 Dihydroxyacetone kinase, subunit L XM56_17355 IPR004007 DhaL domain XM56_17360 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 XM56_17360 IPR004006 DhaK domain XM56_17365 IPR018211 Alcohol dehydrogenase, iron-type, conserved site XM56_17365 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA XM56_17365 IPR016205 Glycerol dehydrogenase XM56_17370 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XM56_17370 IPR001036 Acriflavin resistance protein XM56_17375 IPR006143 RND efflux pump, membrane fusion protein XM56_17375 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain XM56_17380 IPR003876 Arginine deiminase XM56_17385 IPR022461 Arginine/ornithine antiporter XM56_17385 IPR002293 Amino acid/polyamine transporter I XM56_17385 IPR004754 Amino acid antiporter XM56_17395 IPR002201 Glycosyl transferase, family 9 XM56_17395 IPR011916 Lipopolysaccharide heptosyltransferase III, putative XM56_17400 IPR033676 Autoinducer-2 kinase XM56_17400 IPR018485 Carbohydrate kinase, FGGY, C-terminal XM56_17400 IPR000577 Carbohydrate kinase, FGGY XM56_17400 IPR018484 Carbohydrate kinase, FGGY, N-terminal XM56_17405 IPR012318 Crp-type HTH domain XM56_17405 IPR037171 NagB/RpiA transferase-like XM56_17405 IPR007324 Sugar-binding domain, putative XM56_17405 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_17410 IPR003593 AAA+ ATPase domain XM56_17410 IPR017871 ABC transporter, conserved site XM56_17410 IPR003439 ABC transporter-like XM56_17410 IPR030281 Autoinducer 2 import ATP-binding protein LsrA XM56_17410 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_17415 IPR001851 ABC transporter, permease XM56_17420 IPR001851 ABC transporter, permease XM56_17425 IPR030159 Autoinducer 2 ABC transporter, substrate-binding protein LsrB XM56_17425 IPR028082 Periplasmic binding protein-like I XM56_17425 IPR025997 Periplasmic binding protein XM56_17430 IPR013785 Aldolase-type TIM barrel XM56_17430 IPR041720 Aldolase FbaB-like, archaeal-type XM56_17430 IPR033673 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase XM56_17430 IPR002915 DeoC/FbaB/ lacD aldolase XM56_17435 IPR007138 Antibiotic biosynthesis monooxygenase domain XM56_17435 IPR033672 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase XM56_17435 IPR011008 Dimeric alpha-beta barrel XM56_17445 IPR019637 Protein of unknown function DUF2501 XM56_17450 IPR001207 Transposase, mutator type XM56_17485 IPR016181 Acyl-CoA N-acyltransferase XM56_17485 IPR000182 GNAT domain XM56_17495 IPR001584 Integrase, catalytic core XM56_17495 IPR017894 HTH domain, IS21 transposase-type XM56_17500 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_17500 IPR001270 ClpA/B family XM56_17500 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein XM56_17500 IPR003593 AAA+ ATPase domain XM56_17500 IPR002611 IstB-like ATP-binding protein XM56_17505 IPR036397 Ribonuclease H superfamily XM56_17505 IPR025948 HTH-like domain XM56_17505 IPR001584 Integrase, catalytic core XM56_17505 IPR012337 Ribonuclease H-like superfamily XM56_17545 IPR005495 Permease LptG/LptF-related XM56_17545 IPR030923 LPS export ABC transporter permease LptG XM56_17550 IPR030922 LPS export ABC transporter permease LptF XM56_17550 IPR005495 Permease LptG/LptF-related XM56_17555 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal XM56_17555 IPR023042 Peptidase M17, leucine aminopeptidase XM56_17555 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal XM56_17555 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B XM56_17560 IPR036768 DNA polymerase III subunit chi superfamily XM56_17560 IPR007459 DNA polymerase III chi subunit, HolC XM56_17565 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm XM56_17565 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain XM56_17565 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XM56_17565 IPR002300 Aminoacyl-tRNA synthetase, class Ia XM56_17565 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm XM56_17565 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding XM56_17565 IPR033705 Valyl tRNA synthetase, anticodon-binding domain XM56_17565 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding XM56_17565 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily XM56_17565 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site XM56_17565 IPR002303 Valine-tRNA ligase XM56_17570 IPR000182 GNAT domain XM56_17570 IPR016181 Acyl-CoA N-acyltransferase XM56_17580 IPR016716 Regulator of ribonuclease activity B XM56_17580 IPR036701 RraB-like superfamily XM56_17580 IPR009671 Regulator of ribonuclease activity B domain XM56_17585 IPR024904 Ornithine carbamoyltransferase XM56_17585 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding XM56_17585 IPR006130 Aspartate/ornithine carbamoyltransferase XM56_17585 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily XM56_17585 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain XM56_17585 IPR002292 Ornithine/putrescine carbamoyltransferase XM56_17590 IPR037012 YhcH/YjgK/YiaL superfamily XM56_17590 IPR004375 YhcH/YjgK/YiaL family XM56_17600 IPR035906 MetI-like superfamily XM56_17600 IPR000515 ABC transporter type 1, transmembrane domain MetI-like XM56_17610 IPR003439 ABC transporter-like XM56_17610 IPR017871 ABC transporter, conserved site XM56_17610 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal XM56_17610 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_17610 IPR003593 AAA+ ATPase domain XM56_17615 IPR003439 ABC transporter-like XM56_17615 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_17615 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal XM56_17615 IPR017871 ABC transporter, conserved site XM56_17615 IPR003593 AAA+ ATPase domain XM56_17625 IPR019777 Formate C-acetyltransferase glycine radical, conserved site XM56_17625 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic XM56_17625 IPR001150 Glycine radical domain XM56_17625 IPR005144 ATP-cone domain XM56_17630 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic XM56_17630 IPR034457 Organic radical-activating enzymes XM56_17630 IPR001989 Radical-activating enzyme, conserved site XM56_17630 IPR013785 Aldolase-type TIM barrel XM56_17645 IPR036390 Winged helix DNA-binding domain superfamily XM56_17645 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_17645 IPR011663 UbiC transcription regulator-associated XM56_17645 IPR000524 Transcription regulator HTH, GntR XM56_17645 IPR012702 Phosphonate C-P lyase system, transcriptional regulator PhnF XM56_17645 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily XM56_17650 IPR009609 Phosphonate metabolism PhnG XM56_17655 IPR038058 PhnH-like superfamily XM56_17655 IPR008772 Bacterial phosphonate metabolism, PhnH XM56_17660 IPR008773 Phosphonate metabolism protein PhnI XM56_17665 IPR010306 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase XM56_17670 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_17670 IPR003593 AAA+ ATPase domain XM56_17670 IPR003439 ABC transporter-like XM56_17670 IPR017871 ABC transporter, conserved site XM56_17670 IPR012700 Phosphonate C-P lyase system, PhnK XM56_17675 IPR017871 ABC transporter, conserved site XM56_17675 IPR003593 AAA+ ATPase domain XM56_17675 IPR003439 ABC transporter-like XM56_17675 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_17675 IPR012701 Phosphonate C-P lyase system, PhnL XM56_17680 IPR011059 Metal-dependent hydrolase, composite domain superfamily XM56_17680 IPR013108 Amidohydrolase 3 XM56_17680 IPR032466 Metal-dependent hydrolase XM56_17680 IPR012696 Phosphonate metabolism PhnM XM56_17685 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_17685 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN XM56_17685 IPR008145 Guanylate kinase/L-type calcium channel beta subunit XM56_17685 IPR008144 Guanylate kinase-like domain XM56_17690 IPR001279 Metallo-beta-lactamase XM56_17690 IPR035682 Phosphonate metabolism protein, MBL domain XM56_17690 IPR017693 Phosphonate metabolism protein PhnP XM56_17690 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like XM56_17695 IPR000534 Semialdehyde dehydrogenase, NAD-binding XM56_17695 IPR016040 NAD(P)-binding domain XM56_17695 IPR036291 NAD(P)-binding domain superfamily XM56_17700 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily XM56_17700 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family XM56_17710 IPR012349 FMN-binding split barrel XM56_17710 IPR011194 Uncharacterised protein family UPF0306 XM56_17720 IPR008995 Molybdate/tungstate binding, C-terminal XM56_17720 IPR003593 AAA+ ATPase domain XM56_17720 IPR003439 ABC transporter-like XM56_17720 IPR017871 ABC transporter, conserved site XM56_17720 IPR040582 MalK, OB fold domain XM56_17720 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_17720 IPR005116 Transport-associated OB, type 1 XM56_17725 IPR000515 ABC transporter type 1, transmembrane domain MetI-like XM56_17725 IPR035906 MetI-like superfamily XM56_17735 IPR006059 Bacterial extracellular solute-binding protein XM56_17745 IPR008929 Chondroitin AC/alginate lyase XM56_17745 IPR012480 Heparinase II/III-like XM56_17745 IPR008397 Alginate lyase domain XM56_17750 IPR015421 Pyridoxal phosphate-dependent transferase, major domain XM56_17750 IPR027568 Ornithine decarboxylase SpeF XM56_17750 IPR000310 Orn/Lys/Arg decarboxylase, major domain XM56_17750 IPR027464 Ornithine decarboxylase, N-terminal XM56_17750 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal XM56_17750 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily XM56_17750 IPR015424 Pyridoxal phosphate-dependent transferase XM56_17750 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 XM56_17750 IPR011193 Ornithine/lysine/arginine decarboxylase XM56_17750 IPR011006 CheY-like superfamily XM56_17750 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal XM56_17755 IPR027566 Putrescine transporter PotE XM56_17755 IPR004754 Amino acid antiporter XM56_17755 IPR002293 Amino acid/polyamine transporter I XM56_17760 IPR000305 GIY-YIG endonuclease XM56_17760 IPR035901 GIY-YIG endonuclease superfamily XM56_17760 IPR022992 Uncharacterised protein family UPF0213, GIY-YIG endonuclease XM56_17765 IPR016181 Acyl-CoA N-acyltransferase XM56_17765 IPR000182 GNAT domain XM56_17785 IPR005130 Serine dehydratase-like, alpha subunit XM56_17785 IPR021144 Uncharacterised protein family UPF0597 XM56_17795 IPR010131 RND efflux system, outer membrane lipoprotein, NodT XM56_17795 IPR003423 Outer membrane efflux protein XM56_17795 IPR012640 Membrane lipoprotein, lipid attachment site XM56_17800 IPR019949 Luciferase family oxidoreductase, group 1 XM56_17800 IPR036661 Luciferase-like domain superfamily XM56_17800 IPR011251 Luciferase-like domain XM56_17810 IPR014001 Helicase superfamily 1/2, ATP-binding domain XM56_17810 IPR028618 ATP-dependent RNA helicase DeaD XM56_17810 IPR011545 DEAD/DEAH box helicase domain XM56_17810 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain XM56_17810 IPR034415 CsdA, RNA recognition motif XM56_17810 IPR021046 Cold-shock protein, DEAD box A, C-terminal XM56_17810 IPR014014 RNA helicase, DEAD-box type, Q motif XM56_17810 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site XM56_17810 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily XM56_17810 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_17810 IPR001650 Helicase, C-terminal XM56_17815 IPR013105 Tetratricopeptide repeat 2 XM56_17815 IPR011990 Tetratricopeptide-like helical domain superfamily XM56_17815 IPR013026 Tetratricopeptide repeat-containing domain XM56_17815 IPR023605 Lipoprotein NlpI XM56_17815 IPR019734 Tetratricopeptide repeat XM56_17820 IPR001247 Exoribonuclease, phosphorolytic domain 1 XM56_17820 IPR036345 Exoribonuclease, PH domain 2 superfamily XM56_17820 IPR004087 K Homology domain XM56_17820 IPR004088 K Homology domain, type 1 XM56_17820 IPR036612 K Homology domain, type 1 superfamily XM56_17820 IPR012340 Nucleic acid-binding, OB-fold XM56_17820 IPR012162 Polyribonucleotide nucleotidyltransferase XM56_17820 IPR027408 PNPase/RNase PH domain superfamily XM56_17820 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain XM56_17820 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily XM56_17820 IPR020568 Ribosomal protein S5 domain 2-type fold XM56_17820 IPR003029 S1 domain XM56_17820 IPR015847 Exoribonuclease, phosphorolytic domain 2 XM56_17820 IPR022967 RNA-binding domain, S1 XM56_17825 IPR000589 Ribosomal protein S15 XM56_17825 IPR005290 Ribosomal protein S15, bacterial-type XM56_17825 IPR009068 S15/NS1, RNA-binding XM56_17830 IPR036974 PUA domain superfamily XM56_17830 IPR014780 tRNA pseudouridine synthase II, TruB XM56_17830 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal XM56_17830 IPR032819 tRNA pseudouridylate synthase B, C-terminal XM56_17830 IPR015947 PUA-like superfamily XM56_17830 IPR002501 Pseudouridine synthase II, N-terminal XM56_17830 IPR020103 Pseudouridine synthase, catalytic domain superfamily XM56_17835 IPR015946 K homology domain-like, alpha/beta XM56_17835 IPR020053 Ribosome-binding factor A, conserved site XM56_17835 IPR023799 Ribosome-binding factor A domain superfamily XM56_17835 IPR000238 Ribosome-binding factor A XM56_17840 IPR009000 Translation protein, beta-barrel domain superfamily XM56_17840 IPR009061 Putative DNA-binding domain superfamily XM56_17840 IPR023115 Translation initiation factor IF- 2, domain 3 XM56_17840 IPR015760 Translation initiation factor IF- 2 XM56_17840 IPR000178 Translation initiation factor aIF-2, bacterial-like XM56_17840 IPR000795 Transcription factor, GTP-binding domain XM56_17840 IPR005225 Small GTP-binding protein domain XM56_17840 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_17840 IPR006847 Translation initiation factor IF-2, N-terminal XM56_17840 IPR036925 Translation initiation factor IF-2, domain 3 superfamily XM56_17840 IPR013575 Initiation factor 2 associated domain, bacterial XM56_17840 IPR004161 Translation elongation factor EFTu-like, domain 2 XM56_17845 IPR022967 RNA-binding domain, S1 XM56_17845 IPR003029 S1 domain XM56_17845 IPR013735 Transcription factor NusA, N-terminal XM56_17845 IPR010214 Transcription termination factor NusA, C-terminal duplication XM56_17845 IPR015946 K homology domain-like, alpha/beta XM56_17845 IPR025249 KH domain, NusA-like XM56_17845 IPR010213 Transcription termination factor NusA XM56_17845 IPR012340 Nucleic acid-binding, OB-fold XM56_17845 IPR009019 K homology domain superfamily, prokaryotic type XM56_17845 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical XM56_17845 IPR030842 Transcription termination/antitermination protein NusA, bacterial XM56_17845 IPR036555 NusA, N-terminal domain superfamily XM56_17850 IPR028989 Ribosome maturation factor RimP, N-terminal XM56_17850 IPR035956 RimP, N-terminal domain superfamily XM56_17850 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily XM56_17850 IPR028998 Ribosome maturation factor RimP, C-terminal XM56_17850 IPR003728 Ribosome maturation factor RimP XM56_17865 IPR004692 Preprotein translocase SecG subunit XM56_17870 IPR006352 Phosphoglucosamine mutase, bacterial type XM56_17870 IPR016066 Alpha-D-phosphohexomutase, conserved site XM56_17870 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily XM56_17870 IPR005843 Alpha-D-phosphohexomutase, C-terminal XM56_17870 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III XM56_17870 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II XM56_17870 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III XM56_17870 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I XM56_17870 IPR005841 Alpha-D-phosphohexomutase superfamily XM56_17875 IPR006390 Dihydropteroate synthase XM56_17875 IPR011005 Dihydropteroate synthase-like XM56_17875 IPR000489 Pterin-binding domain XM56_17880 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_17880 IPR005936 Peptidase, FtsH XM56_17880 IPR003960 ATPase, AAA-type, conserved site XM56_17880 IPR003959 ATPase, AAA-type, core XM56_17880 IPR000642 Peptidase M41 XM56_17880 IPR037219 Peptidase M41-like XM56_17880 IPR041569 AAA ATPase, AAA+ lid domain XM56_17880 IPR003593 AAA+ ATPase domain XM56_17880 IPR011546 Peptidase M41, FtsH extracellular XM56_17885 IPR015507 Ribosomal RNA large subunit methyltransferase E XM56_17885 IPR002877 Ribosomal RNA methyltransferase FtsJ domain XM56_17885 IPR004512 Ribosomal RNA methyltransferase E, gammaproteobacteria XM56_17885 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XM56_17890 IPR001890 RNA-binding, CRM domain XM56_17890 IPR035920 YhbY-like superfamily XM56_17890 IPR017924 RNA-binding protein YhbY XM56_17895 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily XM56_17895 IPR018151 Transcription elongation factor, GreA/GreB, conserved site XM56_17895 IPR006359 Transcription elongation factor GreA XM56_17895 IPR028624 Transcription elongation factor GreA/GreB XM56_17895 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal XM56_17895 IPR023459 Transcription elongation factor GreA/GreB family XM56_17895 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal XM56_17895 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily XM56_17900 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C XM56_17900 IPR012338 Beta-lactamase/transpeptidase-like XM56_17905 IPR039420 Transcriptional regulatory protein WalR-like XM56_17905 IPR001789 Signal transduction response regulator, receiver domain XM56_17905 IPR001867 OmpR/PhoB-type DNA-binding domain XM56_17905 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_17905 IPR011006 CheY-like superfamily XM56_17910 IPR003660 HAMP domain XM56_17910 IPR003594 Histidine kinase/HSP90-like ATPase XM56_17910 IPR005467 Histidine kinase domain XM56_17910 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain XM56_17910 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily XM56_17910 IPR004358 Signal transduction histidine kinase-related protein, C-terminal XM56_17910 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XM56_17915 IPR036726 GTP1/OBG domain superfamily XM56_17915 IPR035101 GTP-binding protein, Obg-type XM56_17915 IPR031167 OBG-type guanine nucleotide-binding (G) domain XM56_17915 IPR014100 GTP-binding protein Obg/CgtA XM56_17915 IPR006074 GTP1/OBG, conserved site XM56_17915 IPR006169 GTP1/OBG domain XM56_17915 IPR006073 GTP binding domain XM56_17915 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_17920 IPR000620 EamA domain XM56_17925 IPR018261 Ribosomal protein L27, conserved site XM56_17925 IPR001684 Ribosomal protein L27 XM56_17930 IPR036164 L21-like superfamily XM56_17930 IPR018258 Ribosomal protein L21, conserved site XM56_17930 IPR001787 Ribosomal protein L21 XM56_17930 IPR028909 Ribosomal protein L21-like XM56_17935 IPR033749 Polyprenyl synthetase, conserved site XM56_17935 IPR008949 Isoprenoid synthase domain superfamily XM56_17935 IPR000092 Polyprenyl synthetase XM56_17945 IPR010982 Lambda repressor-like, DNA-binding domain superfamily XM56_17945 IPR038722 Ner, winged helix-turn-helix DNA-binding domain XM56_17950 IPR001252 Malate dehydrogenase, active site XM56_17950 IPR010097 Malate dehydrogenase, type 1 XM56_17950 IPR036291 NAD(P)-binding domain superfamily XM56_17950 IPR001236 Lactate/malate dehydrogenase, N-terminal XM56_17950 IPR022383 Lactate/malate dehydrogenase, C-terminal XM56_17950 IPR023958 Malate dehydrogenase, type 1, bacterial XM56_17950 IPR001557 L-lactate/malate dehydrogenase XM56_17950 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal XM56_17955 IPR001669 Arginine repressor XM56_17955 IPR036251 Arginine repressor, C-terminal domain superfamily XM56_17955 IPR020899 Arginine repressor, C-terminal XM56_17955 IPR036390 Winged helix DNA-binding domain superfamily XM56_17955 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_17955 IPR020900 Arginine repressor, DNA-binding domain XM56_17965 IPR005757 Murein peptide ligase XM56_17965 IPR004101 Mur ligase, C-terminal XM56_17965 IPR000713 Mur ligase, N-terminal catalytic domain XM56_17965 IPR036565 Mur-like, catalytic domain superfamily XM56_17965 IPR013221 Mur ligase, central XM56_17965 IPR036615 Mur ligase, C-terminal domain superfamily XM56_17970 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal XM56_17970 IPR000146 Fructose-1,6-bisphosphatase class 1 XM56_17970 IPR028343 Fructose-1,6-bisphosphatase XM56_17970 IPR020548 Fructose-1,6-bisphosphatase, active site XM56_17975 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site XM56_17975 IPR004090 Chemotaxis methyl-accepting receptor XM56_17975 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain XM56_17975 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily XM56_17975 IPR003660 HAMP domain XM56_17975 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding XM56_17980 IPR008162 Inorganic pyrophosphatase XM56_17980 IPR036649 Inorganic pyrophosphatase superfamily XM56_17985 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily XM56_17985 IPR013024 Gamma-glutamyl cyclotransferase-like XM56_17985 IPR039126 Gamma-glutamylaminecyclotransferase XM56_17985 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like XM56_17990 IPR007452 Translocation and assembly module TamB XM56_17995 IPR000184 Bacterial surface antigen (D15) XM56_17995 IPR010827 POTRA domain, BamA/TamA-like XM56_17995 IPR034746 POTRA domain XM56_17995 IPR035243 TamA, POTRA domain 1 XM56_17995 IPR039910 Surface antigen D15-like XM56_18000 IPR002569 Peptide methionine sulphoxide reductase MsrA XM56_18000 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily XM56_18005 IPR002550 CNNM, transmembrane domain XM56_18005 IPR036318 FAD-binding, type PCMH-like superfamily XM56_18005 IPR005170 Transporter-associated domain XM56_18005 IPR016169 FAD-binding, type PCMH, subdomain 2 XM56_18005 IPR000644 CBS domain XM56_18010 IPR009491 Protein of unknown function DUF1107 XM56_18015 IPR006513 Conserved hypothetical protein CHP01626, YtfJ XM56_18020 IPR020583 Inositol monophosphatase, metal-binding site XM56_18020 IPR000760 Inositol monophosphatase-like XM56_18020 IPR020550 Inositol monophosphatase, conserved site XM56_18020 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ XM56_18025 IPR029052 Metallo-dependent phosphatase-like XM56_18025 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase XM56_18025 IPR041827 CpdB, N-terminal metallophosphatase domain XM56_18025 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type XM56_18025 IPR006179 5'-Nucleotidase/apyrase XM56_18025 IPR036907 5'-Nucleotidase, C-terminal domain superfamily XM56_18025 IPR006146 5'-Nucleotidase, conserved site XM56_18025 IPR008334 5'-Nucleotidase, C-terminal XM56_18030 IPR023742 Iron-sulfur cluster repair protein YftE XM56_18030 IPR012312 Haemerythrin-like XM56_18030 IPR019903 Repair of iron centres family XM56_18035 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain XM56_18035 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal XM56_18035 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily XM56_18040 IPR007340 Opacity-associated protein A XM56_18040 IPR013731 Opacity-associated protein A, N-terminal XM56_18050 IPR020594 Ribosomal protein L9, bacteria/chloroplast XM56_18050 IPR009027 Ribosomal protein L9/RNase H1, N-terminal XM56_18050 IPR036935 Ribosomal protein L9, N-terminal domain superfamily XM56_18050 IPR020070 Ribosomal protein L9, N-terminal XM56_18050 IPR036791 Ribosomal protein L9, C-terminal domain superfamily XM56_18050 IPR000244 Ribosomal protein L9 XM56_18050 IPR020069 Ribosomal protein L9, C-terminal XM56_18055 IPR001648 Ribosomal protein S18 XM56_18055 IPR018275 Ribosomal protein S18, conserved site XM56_18055 IPR036870 Ribosomal protein S18 superfamily XM56_18060 IPR000424 Primosome PriB/single-strand DNA-binding XM56_18060 IPR012340 Nucleic acid-binding, OB-fold XM56_18060 IPR023646 Primosomal replication protein PriB XM56_18065 IPR020815 Ribosomal protein S6, conserved site XM56_18065 IPR020814 Ribosomal protein S6, plastid/chloroplast XM56_18065 IPR035980 Ribosomal protein S6 superfamily XM56_18065 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 XM56_18065 IPR000529 Ribosomal protein S6 XM56_18075 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain XM56_18075 IPR029058 Alpha/Beta hydrolase fold XM56_18080 IPR036275 YdgH-like superfamily XM56_18080 IPR025543 Dodecin-like XM56_18080 IPR010854 Domain of unknown function DUF1471 XM56_18085 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal XM56_18085 IPR034184 Putative acyl-CoA dehydrogenase AidB XM56_18085 IPR041504 Adaptive response protein AidB, N-terminal XM56_18085 IPR006089 Acyl-CoA dehydrogenase, conserved site XM56_18085 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal XM56_18085 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain XM56_18085 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily XM56_18090 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB XM56_18090 IPR029064 50S ribosomal protein L30e-like XM56_18090 IPR029028 Alpha/beta knot methyltransferases XM56_18090 IPR001537 tRNA/rRNA methyltransferase, SpoU type XM56_18090 IPR013123 RNA 2-O ribose methyltransferase, substrate binding XM56_18090 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal XM56_18090 IPR004441 RNA methyltransferase TrmH family XM56_18095 IPR012340 Nucleic acid-binding, OB-fold XM56_18095 IPR040476 RNase II/RNase R, cold shock domain XM56_18095 IPR011129 Cold shock domain XM56_18095 IPR022966 Ribonuclease II/R, conserved site XM56_18095 IPR022967 RNA-binding domain, S1 XM56_18095 IPR001900 Ribonuclease II/R XM56_18095 IPR013223 Ribonuclease B, N-terminal OB domain XM56_18095 IPR013668 Ribonuclease R winged-helix domain XM56_18095 IPR011805 Ribonuclease R XM56_18095 IPR004476 Ribonuclease II/ribonuclease R XM56_18095 IPR003029 S1 domain XM56_18100 IPR023761 Transcriptional repressor HTH, NsrR XM56_18100 IPR030489 Transcription regulator Rrf2-type, conserved site XM56_18100 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_18100 IPR036390 Winged helix DNA-binding domain superfamily XM56_18100 IPR000944 Transcription regulator Rrf2-type XM56_18105 IPR018220 Adenylosuccinate synthase, GTP-binding site XM56_18105 IPR033128 Adenylosuccinate synthase, active site XM56_18105 IPR042109 Adenylosuccinate synthetase, domain 1 XM56_18105 IPR042111 Adenylosuccinate synthetase, domain 3 XM56_18105 IPR001114 Adenylosuccinate synthetase XM56_18105 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_18105 IPR042110 Adenylosuccinate synthetase, domain 2 XM56_18110 IPR019201 Protein of unknown function DUF2065 XM56_18115 IPR001107 Band 7 domain XM56_18115 IPR036013 Band 7/SPFH domain superfamily XM56_18115 IPR010200 HflC XM56_18120 IPR010201 HflK XM56_18120 IPR036013 Band 7/SPFH domain superfamily XM56_18120 IPR001107 Band 7 domain XM56_18120 IPR020980 Menbrane protein HflK, N-terminal XM56_18120 IPR001972 Stomatin family XM56_18125 IPR006073 GTP binding domain XM56_18125 IPR032305 GTP-binding protein, middle domain XM56_18125 IPR042108 GTPase HflX, N-terminal domain superfamily XM56_18125 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_18125 IPR030394 HflX-type guanine nucleotide-binding (G) domain XM56_18125 IPR035647 EF-G domain III/V-like XM56_18125 IPR025121 GTPase HflX, N-terminal XM56_18125 IPR016496 GTPase HflX XM56_18130 IPR010920 LSM domain superfamily XM56_18130 IPR005001 RNA-binding protein Hfq XM56_18135 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_18135 IPR018022 IPP transferase XM56_18135 IPR039657 Dimethylallyltransferase XM56_18140 IPR014762 DNA mismatch repair, conserved site XM56_18140 IPR020667 DNA mismatch repair protein, MutL XM56_18140 IPR002099 DNA mismatch repair protein family, N-terminal XM56_18140 IPR013507 DNA mismatch repair protein, S5 domain 2-like XM56_18140 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XM56_18140 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms XM56_18140 IPR014790 MutL, C-terminal, dimerisation XM56_18140 IPR042120 MutL, C-terminal domain, dimerisation subdomain XM56_18140 IPR042121 MutL, C-terminal domain, regulatory subdomain XM56_18140 IPR020568 Ribosomal protein S5 domain 2-type fold XM56_18140 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup XM56_18140 IPR037198 MutL, C-terminal domain superfamily XM56_18145 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain XM56_18150 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_18150 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE XM56_18155 IPR036652 YjeF N-terminal domain superfamily XM56_18155 IPR017953 Carbohydrate kinase, predicted, conserved site XM56_18155 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase XM56_18155 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr XM56_18155 IPR029056 Ribokinase-like XM56_18155 IPR004443 YjeF N-terminal domain XM56_18160 IPR009051 Alpha-helical ferredoxin XM56_18160 IPR013542 Domain of unknown function DUF1730 XM56_18160 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain XM56_18160 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site XM56_18160 IPR004453 Epoxyqueuosine reductase QueG XM56_18170 IPR013520 Exonuclease, RNase T/DNA polymerase III XM56_18170 IPR022894 Oligoribonuclease XM56_18170 IPR012337 Ribonuclease H-like superfamily XM56_18170 IPR036397 Ribonuclease H superfamily XM56_18175 IPR010914 RsgA GTPase domain XM56_18175 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_18175 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain XM56_18175 IPR004881 Ribosome biogenesis GTPase RsgA XM56_18180 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 XM56_18180 IPR003817 Phosphatidylserine decarboxylase-related XM56_18180 IPR033177 Phosphatidylserine decarboxylase XM56_18185 IPR010920 LSM domain superfamily XM56_18185 IPR023408 Mechanosensitive ion channel MscS domain superfamily XM56_18185 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 XM56_18185 IPR024393 Mechanosensitive ion channel MscS, porin domain XM56_18185 IPR006686 Mechanosensitive ion channel MscS, conserved site XM56_18185 IPR011066 Mechanosensitive ion channel MscS, C-terminal XM56_18185 IPR025692 Mechanosensitive ion channel inner membrane domain 1 XM56_18185 IPR006685 Mechanosensitive ion channel MscS XM56_18190 IPR006195 Aminoacyl-tRNA synthetase, class II XM56_18190 IPR004525 Elongation factor P--(R)-beta-lysine ligase XM56_18190 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) XM56_18190 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal XM56_18195 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain XM56_18195 IPR036188 FAD/NAD(P)-binding domain superfamily XM56_18195 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site XM56_18195 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily XM56_18195 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal XM56_18195 IPR005884 Fumarate reductase, flavoprotein subunit XM56_18195 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily XM56_18195 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit XM56_18200 IPR036010 2Fe-2S ferredoxin-like superfamily XM56_18200 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain XM56_18200 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal XM56_18200 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site XM56_18200 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein XM56_18200 IPR009051 Alpha-helical ferredoxin XM56_18200 IPR012675 Beta-grasp domain superfamily XM56_18200 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain XM56_18200 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site XM56_18205 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit XM56_18205 IPR003510 Fumarate reductase, subunit C XM56_18210 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit XM56_18210 IPR003418 Fumarate reductase, subunit D XM56_18215 IPR012674 Calycin XM56_18215 IPR022271 Lipocalin, ApoD type XM56_18215 IPR002446 Lipocalin, bacterial XM56_18215 IPR000566 Lipocalin/cytosolic fatty-acid binding domain XM56_18215 IPR022272 Lipocalin family conserved site XM56_18220 IPR000390 Small multidrug resistance protein family XM56_18225 IPR012556 Entericidin A/B XM56_18230 IPR013852 Translation elongation factor P/YeiP, conserved site XM56_18230 IPR015365 Elongation factor P, C-terminal XM56_18230 IPR001059 Translation elongation factor P/YeiP, central XM56_18230 IPR012340 Nucleic acid-binding, OB-fold XM56_18230 IPR011768 Translation elongation factor P XM56_18230 IPR014722 Ribosomal protein L2, domain 2 XM56_18230 IPR008991 Translation protein SH3-like domain superfamily XM56_18230 IPR020599 Translation elongation factor P/YeiP XM56_18230 IPR013185 Translation elongation factor, KOW-like XM56_18235 IPR013785 Aldolase-type TIM barrel XM56_18235 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase XM56_18235 IPR007197 Radical SAM XM56_18235 IPR022462 Lysine-2,3-aminomutase-like XM56_18240 IPR025294 Protein of unknown function DUF4156 XM56_18250 IPR001844 Chaperonin Cpn60 XM56_18250 IPR027409 GroEL-like apical domain superfamily XM56_18250 IPR018370 Chaperonin Cpn60, conserved site XM56_18250 IPR027413 GroEL-like equatorial domain superfamily XM56_18250 IPR027410 TCP-1-like chaperonin intermediate domain superfamily XM56_18250 IPR002423 Chaperonin Cpn60/TCP-1 family XM56_18255 IPR037124 GroES chaperonin superfamily XM56_18255 IPR011032 GroES-like superfamily XM56_18255 IPR020818 GroES chaperonin family XM56_18255 IPR018369 Chaperonin GroES, conserved site XM56_18260 IPR007313 FxsA cytoplasmic membrane protein XM56_18265 IPR004708 Aspartate ammonia-lyase XM56_18265 IPR018951 Fumarase C, C-terminal XM56_18265 IPR008948 L-Aspartase-like XM56_18265 IPR022761 Fumarate lyase, N-terminal XM56_18265 IPR000362 Fumarate lyase family XM56_18265 IPR024083 Fumarase/histidase, N-terminal XM56_18265 IPR020557 Fumarate lyase, conserved site XM56_18270 IPR004668 Anaerobic c4-dicarboxylate membrane transporter XM56_18275 IPR023700 Divalent cation tolerance protein CutA, Enterobacteria XM56_18275 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal XM56_18275 IPR011322 Nitrogen regulatory PII-like, alpha/beta XM56_18275 IPR004323 Divalent ion tolerance protein, CutA XM56_18280 IPR013766 Thioredoxin domain XM56_18280 IPR036249 Thioredoxin-like superfamily XM56_18280 IPR017937 Thioredoxin, conserved site XM56_18280 IPR035671 DsbD gamma XM56_18280 IPR022910 Thiol:disulphide interchange protein DsbD XM56_18280 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily XM56_18280 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain XM56_18280 IPR003834 Cytochrome C biogenesis protein, transmembrane domain XM56_18285 IPR018193 Glycerate kinase, flavodoxin-like fold XM56_18285 IPR004381 Glycerate kinase XM56_18285 IPR036129 Glycerate kinase superfamily XM56_18285 IPR018197 Glycerate kinase, restriction-enzyme-like fold XM56_18290 IPR001647 DNA-binding HTH domain, TetR-type XM56_18290 IPR009057 Homeobox-like domain superfamily XM56_18290 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily XM56_18300 IPR005949 Formate acetyltransferase XM56_18300 IPR004184 Pyruvate formate lyase domain XM56_18300 IPR001150 Glycine radical domain XM56_18300 IPR019777 Formate C-acetyltransferase glycine radical, conserved site XM56_18305 IPR000890 Aliphatic acid kinase, short-chain XM56_18305 IPR024917 Propionate kinase XM56_18305 IPR023865 Aliphatic acid kinase, short-chain, conserved site XM56_18305 IPR004372 Acetate/propionate kinase XM56_18310 IPR004694 Hydroxy amino acid transporter XM56_18310 IPR023726 Threonine/serine transporter TdcC XM56_18310 IPR013057 Amino acid transporter, transmembrane domain XM56_18315 IPR001926 Pyridoxal-phosphate dependent enzyme XM56_18315 IPR005789 Threonine dehydratase, catabolic XM56_18315 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme XM56_18315 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site XM56_18320 IPR023404 Radical SAM, alpha/beta horseshoe XM56_18320 IPR007197 Radical SAM XM56_18320 IPR026332 Anaerobilin synthase HutW XM56_18320 IPR006638 Elp3/MiaB/NifB XM56_18320 IPR034505 Anaerobic coproporphyrinogen-III oxidase XM56_18325 IPR010413 Intracellular heme transport protein HutX-like XM56_18335 IPR019600 Hemin uptake protein HemP XM56_18340 IPR039426 Vitamin B12 transporter BtuB-like XM56_18340 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor XM56_18340 IPR011276 TonB-dependent haem/haemoglobin receptor XM56_18340 IPR010916 TonB box, conserved site XM56_18340 IPR000531 TonB-dependent receptor-like, beta-barrel XM56_18340 IPR037066 TonB-dependent receptor, plug domain superfamily XM56_18340 IPR012910 TonB-dependent receptor, plug domain XM56_18340 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily XM56_18345 IPR007845 Haemin-degrading HemS/ChuX domain XM56_18350 IPR002491 ABC transporter periplasmic binding domain XM56_18355 IPR037294 ABC transporter, BtuC-like XM56_18355 IPR000522 ABC transporter, permease protein, BtuC-like XM56_18360 IPR015863 ABC transporter, hemin import, HmuV XM56_18360 IPR003593 AAA+ ATPase domain XM56_18360 IPR003439 ABC transporter-like XM56_18360 IPR017871 ABC transporter, conserved site XM56_18360 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_18365 IPR000524 Transcription regulator HTH, GntR XM56_18365 IPR015421 Pyridoxal phosphate-dependent transferase, major domain XM56_18365 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 XM56_18365 IPR015424 Pyridoxal phosphate-dependent transferase XM56_18365 IPR004839 Aminotransferase, class I/classII XM56_18365 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_18365 IPR036390 Winged helix DNA-binding domain superfamily XM56_18370 IPR000531 TonB-dependent receptor-like, beta-barrel XM56_18370 IPR010917 TonB-dependent receptor, conserved site XM56_18370 IPR012910 TonB-dependent receptor, plug domain XM56_18370 IPR010105 TonB-dependent siderophore receptor XM56_18370 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily XM56_18370 IPR039423 TonB-dependent receptor-like XM56_18370 IPR037066 TonB-dependent receptor, plug domain superfamily XM56_18375 IPR010920 LSM domain superfamily XM56_18375 IPR006685 Mechanosensitive ion channel MscS XM56_18375 IPR011066 Mechanosensitive ion channel MscS, C-terminal XM56_18375 IPR006686 Mechanosensitive ion channel MscS, conserved site XM56_18375 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 XM56_18375 IPR023408 Mechanosensitive ion channel MscS domain superfamily XM56_18375 IPR025692 Mechanosensitive ion channel inner membrane domain 1 XM56_18375 IPR024393 Mechanosensitive ion channel MscS, porin domain XM56_18380 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily XM56_18380 IPR009614 Toxin YoeB XM56_18385 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM XM56_18385 IPR036165 YefM-like superfamily XM56_18390 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like XM56_18390 IPR001431 Peptidase M16, zinc-binding site XM56_18390 IPR007863 Peptidase M16, C-terminal XM56_18390 IPR011765 Peptidase M16, N-terminal XM56_18395 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_18395 IPR017871 ABC transporter, conserved site XM56_18395 IPR003439 ABC transporter-like XM56_18395 IPR036640 ABC transporter type 1, transmembrane domain superfamily XM56_18395 IPR011527 ABC transporter type 1, transmembrane domain XM56_18395 IPR003593 AAA+ ATPase domain XM56_18400 IPR012910 TonB-dependent receptor, plug domain XM56_18400 IPR037066 TonB-dependent receptor, plug domain superfamily XM56_18400 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily XM56_18405 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component XM56_18405 IPR032623 FecR, N-terminal XM56_18405 IPR006860 FecR protein XM56_18420 IPR001455 TusA-like domain XM56_18420 IPR036868 TusA-like domain superfamily XM56_18425 IPR007272 Sulphur transport domain XM56_18430 IPR029025 Type III secretion system substrate exporter, C-terminal XM56_18430 IPR006307 Type III exporter system, secretion apparatus protein BsaZ XM56_18430 IPR006135 Type III secretion system substrate exporter XM56_18435 IPR002010 Type III secretion system inner membrane R protein XM56_18435 IPR006304 Type III secretion protein SpaR/YscT XM56_18440 IPR002191 Bacterial export protein family 3 XM56_18440 IPR006306 Type III secretion protein HrpO XM56_18445 IPR005773 Yop virulence translocation protein R XM56_18445 IPR005838 Type III secretion system inner membrane P protein XM56_18450 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO XM56_18450 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb XM56_18450 IPR036429 SpoA-like superfamily XM56_18450 IPR001543 Surface presentation of antigen (SpoA) XM56_18465 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_18465 IPR013380 ATPase, type III secretion system, H+-transporting XM56_18465 IPR005714 ATPase, type III secretion system, FliI/YscN XM56_18465 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain XM56_18465 IPR003593 AAA+ ATPase domain XM56_18465 IPR040627 T3SS EscN ATPase, C-terminal XM56_18470 IPR042196 FHIPEP, domain 4 XM56_18470 IPR006302 Type III secretion protein HrcV XM56_18470 IPR025505 FHIPEP conserved site XM56_18470 IPR042193 FHIPEP, domain 3 XM56_18470 IPR001712 Type III secretion system FHIPEP XM56_18475 IPR017033 Type III secretion system apparatus protein SsaM XM56_18480 IPR010812 Hypersensitivity response secretion-like, HrpJ XM56_18480 IPR013351 Type III secretion system effector delivery regulator TyeA-related XM56_18495 IPR006182 Secretory protein YscJ/FliF XM56_18495 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ XM56_18515 IPR009057 Homeobox-like domain superfamily XM56_18515 IPR018060 DNA binding HTH domain, AraC-type XM56_18515 IPR018062 HTH domain AraC-type, conserved site XM56_18515 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like XM56_18540 IPR006972 Secretion system effector C, SseC-like XM56_18580 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily XM56_18580 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain XM56_18580 IPR003660 HAMP domain XM56_18580 IPR003594 Histidine kinase/HSP90-like ATPase XM56_18580 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XM56_18580 IPR019247 Histidine kinase BarA, N-terminal XM56_18580 IPR005467 Histidine kinase domain XM56_18580 IPR011006 CheY-like superfamily XM56_18580 IPR001789 Signal transduction response regulator, receiver domain XM56_18580 IPR036641 HPT domain superfamily XM56_18580 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain XM56_18580 IPR004358 Signal transduction histidine kinase-related protein, C-terminal XM56_18585 IPR000792 Transcription regulator LuxR, C-terminal XM56_18585 IPR001789 Signal transduction response regulator, receiver domain XM56_18585 IPR016032 Signal transduction response regulator, C-terminal effector XM56_18585 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_18585 IPR011006 CheY-like superfamily XM56_18590 IPR018107 Sodium:dicarboxylate symporter, conserved site XM56_18590 IPR033380 Glutamate-aspartate symport protein GltP/GltT XM56_18590 IPR034703 Proton/glutamate-aspartate symporter GltP XM56_18590 IPR036458 Sodium:dicarboxylate symporter superfamily XM56_18590 IPR001991 Sodium:dicarboxylate symporter XM56_18595 IPR000873 AMP-dependent synthetase/ligase XM56_18595 IPR042099 AMP-dependent synthetase-like superfamily XM56_18595 IPR020845 AMP-binding, conserved site XM56_18595 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain XM56_18595 IPR011904 Acetate-CoA ligase XM56_18595 IPR025110 AMP-binding enzyme, C-terminal domain XM56_18600 IPR007436 Protein of unknown function DUF485 XM56_18605 IPR014083 Cation/acetate symporter ActP XM56_18605 IPR038377 Sodium/glucose symporter superfamily XM56_18605 IPR001734 Sodium/solute symporter XM56_18605 IPR018212 Sodium/solute symporter, conserved site XM56_18645 IPR016193 Cytidine deaminase-like XM56_18645 IPR024051 AICAR transformylase, duplicated domain superfamily XM56_18645 IPR036914 Methylglyoxal synthase-like domain superfamily XM56_18645 IPR002695 Bifunctional purine biosynthesis protein PurH-like XM56_18645 IPR011607 Methylglyoxal synthase-like domain XM56_18650 IPR013815 ATP-grasp fold, subdomain 1 XM56_18650 IPR011054 Rudiment single hybrid motif XM56_18650 IPR020559 Phosphoribosylglycinamide synthetase, conserved site XM56_18650 IPR020560 Phosphoribosylglycinamide synthetase, C-domain XM56_18650 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal XM56_18650 IPR011761 ATP-grasp fold XM56_18650 IPR000115 Phosphoribosylglycinamide synthetase XM56_18650 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain XM56_18650 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily XM56_18650 IPR016185 Pre-ATP-grasp domain superfamily XM56_18655 IPR010858 Protein of unknown function DUF1481 XM56_18655 IPR016500 Uncharacterised conserved protein UCP006993 XM56_18660 IPR020816 Histone-like DNA-binding protein, conserved site XM56_18660 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily XM56_18660 IPR000119 Histone-like DNA-binding protein XM56_18665 IPR007338 Protein of unknown function DUF416 XM56_18665 IPR023381 YP001051499.1-like domain superfamily XM56_18670 IPR007581 Endonuclease V XM56_18675 IPR006361 Uroporphyrinogen decarboxylase HemE XM56_18675 IPR038071 UROD/MetE-like superfamily XM56_18675 IPR000257 Uroporphyrinogen decarboxylase (URO-D) XM56_18680 IPR022925 NADH pyrophosphatase NudC XM56_18680 IPR015797 NUDIX hydrolase-like domain superfamily XM56_18680 IPR020084 NUDIX hydrolase, conserved site XM56_18680 IPR000086 NUDIX hydrolase domain XM56_18680 IPR015376 Zinc ribbon, NADH pyrophosphatase XM56_18685 IPR023785 Regulator of RNA polymerase sigma(70) subunit, Rsd XM56_18685 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ XM56_18685 IPR038309 Rsd/AlgQ superfamily XM56_18690 IPR025747 ThiC-associated domain XM56_18690 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B XM56_18690 IPR038521 ThiC/Bza superfamily XM56_18690 IPR037509 Phosphomethylpyrimidine synthase XM56_18695 IPR036206 Thiamin phosphate synthase superfamily XM56_18695 IPR013785 Aldolase-type TIM barrel XM56_18695 IPR034291 Thiamine phosphate synthase XM56_18695 IPR022998 Thiamine phosphate synthase/TenI XM56_18700 IPR012731 Thiazole biosynthesis adenylyltransferase ThiF XM56_18700 IPR000594 THIF-type NAD/FAD binding fold XM56_18700 IPR035985 Ubiquitin-activating enzyme XM56_18705 IPR012675 Beta-grasp domain superfamily XM56_18705 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp XM56_18705 IPR010035 ThiS, thiamine-biosynthesis XM56_18705 IPR003749 Sulfur carrier ThiS/MoaD-like XM56_18710 IPR008867 Thiazole synthase XM56_18710 IPR013785 Aldolase-type TIM barrel XM56_18710 IPR033983 Thiazole synthase ThiG XM56_18715 IPR012726 Thiazole biosynthesis ThiH XM56_18715 IPR007197 Radical SAM XM56_18715 IPR010722 Biotin and thiamin synthesis-associated domain XM56_18715 IPR034428 ThiH/NocL/HydG-like XM56_18715 IPR013785 Aldolase-type TIM barrel XM56_18725 IPR007081 RNA polymerase Rpb1, domain 5 XM56_18725 IPR000722 RNA polymerase, alpha subunit XM56_18725 IPR007083 RNA polymerase Rpb1, domain 4 XM56_18725 IPR042102 RNA polymerase Rpb1, domain 3 superfamily XM56_18725 IPR007066 RNA polymerase Rpb1, domain 3 XM56_18725 IPR007080 RNA polymerase Rpb1, domain 1 XM56_18725 IPR012754 DNA-directed RNA polymerase, subunit beta-prime XM56_18725 IPR038120 RNA polymerase Rpb1, funnel domain superfamily XM56_18725 IPR006592 RNA polymerase, N-terminal XM56_18730 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily XM56_18730 IPR037034 RNA polymerase Rpb2, domain 2 superfamily XM56_18730 IPR015712 DNA-directed RNA polymerase, subunit 2 XM56_18730 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain XM56_18730 IPR007645 RNA polymerase Rpb2, domain 3 XM56_18730 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type XM56_18730 IPR007641 RNA polymerase Rpb2, domain 7 XM56_18730 IPR014724 RNA polymerase Rpb2, OB-fold XM56_18730 IPR007642 RNA polymerase Rpb2, domain 2 XM56_18730 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain XM56_18730 IPR007644 RNA polymerase, beta subunit, protrusion XM56_18730 IPR007121 RNA polymerase, beta subunit, conserved site XM56_18735 IPR000206 Ribosomal protein L7/L12 XM56_18735 IPR013823 Ribosomal protein L7/L12, C-terminal XM56_18735 IPR008932 Ribosomal protein L7/L12, oligomerisation XM56_18735 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily XM56_18735 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like XM56_18740 IPR002363 Ribosomal protein L10, eubacterial, conserved site XM56_18740 IPR001790 Ribosomal protein L10P XM56_18740 IPR022973 Ribosomal protein L10 XM56_18745 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein XM56_18745 IPR023673 Ribosomal protein L1, conserved site XM56_18745 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich XM56_18745 IPR005878 Ribosomal protein L1, bacterial-type XM56_18745 IPR023674 Ribosomal protein L1-like XM56_18745 IPR002143 Ribosomal protein L1 XM56_18750 IPR000911 Ribosomal protein L11/L12 XM56_18750 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily XM56_18750 IPR036769 Ribosomal protein L11, C-terminal domain superfamily XM56_18750 IPR006519 Ribosomal protein L11, bacterial-type XM56_18750 IPR020784 Ribosomal protein L11, N-terminal XM56_18750 IPR020783 Ribosomal protein L11, C-terminal XM56_18750 IPR020785 Ribosomal protein L11, conserved site XM56_18755 IPR036735 NusG, N-terminal domain superfamily XM56_18755 IPR014722 Ribosomal protein L2, domain 2 XM56_18755 IPR001062 Transcription antitermination protein, NusG XM56_18755 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site XM56_18755 IPR008991 Translation protein SH3-like domain superfamily XM56_18755 IPR006645 NusG, N-terminal XM56_18755 IPR005824 KOW XM56_18760 IPR005807 SecE subunit of protein translocation complex, bacterial-like XM56_18760 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit XM56_18760 IPR038379 SecE superfamily XM56_18765 IPR005225 Small GTP-binding protein domain XM56_18765 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain XM56_18765 IPR004161 Translation elongation factor EFTu-like, domain 2 XM56_18765 IPR033720 Elongation factor Tu, domain 2 XM56_18765 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal XM56_18765 IPR009000 Translation protein, beta-barrel domain superfamily XM56_18765 IPR031157 Tr-type G domain, conserved site XM56_18765 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal XM56_18765 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle XM56_18765 IPR000795 Transcription factor, GTP-binding domain XM56_18765 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_18790 IPR016181 Acyl-CoA N-acyltransferase XM56_18790 IPR000182 GNAT domain XM56_18795 IPR006083 Phosphoribulokinase/uridine kinase XM56_18795 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_18795 IPR004566 Pantothenate kinase XM56_18800 IPR004409 Biotin operon repressor, helix-turn-helix domain XM56_18800 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_18800 IPR008988 Transcriptional repressor, C-terminal XM56_18800 IPR004408 Biotin--acetyl-CoA-carboxylase ligase XM56_18800 IPR030855 Bifunctional ligase/repressor BirA XM56_18800 IPR013196 Helix-turn-helix, type 11 XM56_18800 IPR036390 Winged helix DNA-binding domain superfamily XM56_18800 IPR003142 Biotin protein ligase, C-terminal XM56_18800 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain XM56_18805 IPR006094 FAD linked oxidase, N-terminal XM56_18805 IPR016169 FAD-binding, type PCMH, subdomain 2 XM56_18805 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily XM56_18805 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal XM56_18805 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase XM56_18805 IPR016167 FAD-binding, type PCMH, subdomain 1 XM56_18805 IPR036318 FAD-binding, type PCMH-like superfamily XM56_18805 IPR016166 FAD-binding domain, PCMH-type XM56_18810 IPR003346 Transposase, IS116/IS110/IS902 XM56_18810 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal XM56_18840 IPR008254 Flavodoxin/nitric oxide synthase XM56_18840 IPR029039 Flavoprotein-like superfamily XM56_18840 IPR026816 Flavodoxin domain XM56_18840 IPR001226 Flavodoxin, conserved site XM56_18845 IPR004772 TrkH potassium transport family XM56_18845 IPR003445 Cation transporter XM56_18850 IPR023582 Impact family XM56_18850 IPR035647 EF-G domain III/V-like XM56_18850 IPR036956 Impact, N-terminal domain superfamily XM56_18850 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal XM56_18850 IPR015796 Impact family, bacterial/archaeal XM56_18850 IPR020568 Ribosomal protein S5 domain 2-type fold XM56_18850 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site XM56_18850 IPR001498 Impact, N-terminal XM56_18855 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal XM56_18855 IPR036005 Creatinase/aminopeptidase-like XM56_18855 IPR000994 Peptidase M24 XM56_18855 IPR022846 Xaa-Pro dipeptidase XM56_18855 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site XM56_18860 IPR029045 ClpP/crotonase-like domain superfamily XM56_18860 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site XM56_18860 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding XM56_18860 IPR001753 Enoyl-CoA hydratase/isomerase XM56_18860 IPR036291 NAD(P)-binding domain superfamily XM56_18860 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily XM56_18860 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal XM56_18860 IPR012799 Fatty oxidation complex, alpha subunit FadB XM56_18860 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site XM56_18865 IPR012805 Acetyl-CoA C-acyltransferase FadA XM56_18865 IPR020617 Thiolase, C-terminal XM56_18865 IPR020610 Thiolase, active site XM56_18865 IPR020615 Thiolase, acyl-enzyme intermediate active site XM56_18865 IPR016039 Thiolase-like XM56_18865 IPR002155 Thiolase XM56_18865 IPR020616 Thiolase, N-terminal XM56_18865 IPR020613 Thiolase, conserved site XM56_18870 IPR017938 Riboflavin synthase-like beta-barrel XM56_18870 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain XM56_18870 IPR001433 Oxidoreductase FAD/NAD(P)-binding XM56_18870 IPR017927 FAD-binding domain, ferredoxin reductase-type XM56_18870 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain XM56_18875 IPR023677 UbiD decarboxylyase, bacteria XM56_18875 IPR002830 UbiD decarboxylyase family XM56_18880 IPR010215 Transcription antitermination protein RfaH XM56_18880 IPR036735 NusG, N-terminal domain superfamily XM56_18880 IPR006645 NusG, N-terminal XM56_18885 IPR030656 Delta-aminolevulinic acid dehydratase, active site XM56_18885 IPR013785 Aldolase-type TIM barrel XM56_18885 IPR001731 Delta-aminolevulinic acid dehydratase XM56_18890 IPR001130 TatD family XM56_18890 IPR018228 Deoxyribonuclease, TatD-related, conserved site XM56_18890 IPR024918 3'-5' ssDNA/RNA exonuclease TatD XM56_18890 IPR032466 Metal-dependent hydrolase XM56_18895 IPR019820 Sec-independent periplasmic protein translocase, conserved site XM56_18895 IPR002033 Sec-independent periplasmic protein translocase TatC XM56_18900 IPR018448 Twin-arginine translocation protein TatB XM56_18905 IPR006312 Sec-independent protein translocase protein TatA/E XM56_18905 IPR003369 Sec-independent protein translocase protein TatA/B/E XM56_18910 IPR011009 Protein kinase-like domain superfamily XM56_18910 IPR010232 Probable protein kinase UbiB XM56_18910 IPR004147 UbiB domain XM56_18915 IPR038989 Ubiquinone biosynthesis protein UbiJ XM56_18915 IPR036527 SCP2 sterol-binding domain superfamily XM56_18915 IPR003033 SCP2 sterol-binding domain XM56_18920 IPR004033 UbiE/COQ5 methyltransferase XM56_18920 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XM56_18920 IPR023576 UbiE/COQ5 methyltransferase, conserved site XM56_18925 IPR003798 DNA recombination RmuC XM56_18930 IPR032816 SNARE associated Golgi protein XM56_18930 IPR032818 DedA family XM56_18935 IPR003706 CstA, N-terminal domain XM56_18935 IPR025299 CstA, C-terminal domain XM56_18950 IPR000845 Nucleoside phosphorylase domain XM56_18950 IPR035994 Nucleoside phosphorylase superfamily XM56_18950 IPR010058 Uridine phosphorylase XM56_18950 IPR018016 Nucleoside phosphorylase, conserved site XM56_18955 IPR002925 Dienelactone hydrolase XM56_18955 IPR029058 Alpha/Beta hydrolase fold XM56_18960 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal XM56_18960 IPR006276 Cobalamin-independent methionine synthase XM56_18960 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal XM56_18960 IPR038071 UROD/MetE-like superfamily XM56_18965 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_18965 IPR037406 HTH-type transcriptional regulator MetR, PBP2 domain XM56_18965 IPR036390 Winged helix DNA-binding domain superfamily XM56_18965 IPR000847 Transcription regulator HTH, LysR XM56_18965 IPR005119 LysR, substrate-binding XM56_18970 IPR000620 EamA domain XM56_18970 IPR004779 Carboxylate/Amino Acid/Amine Transporter XM56_18975 IPR004776 Membrane transport protein XM56_18980 IPR030395 Glycerophosphodiester phosphodiesterase domain XM56_18980 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily XM56_18985 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_18985 IPR017922 sn-Glycerol-3-phosphate import ATP-binding protein UgpC XM56_18985 IPR003593 AAA+ ATPase domain XM56_18985 IPR040582 MalK, OB fold domain XM56_18985 IPR003439 ABC transporter-like XM56_18985 IPR017871 ABC transporter, conserved site XM56_18985 IPR008995 Molybdate/tungstate binding, C-terminal XM56_18990 IPR030165 sn-Glycerol-3-phosphate transport system permease protein UgpE XM56_18990 IPR000515 ABC transporter type 1, transmembrane domain MetI-like XM56_18990 IPR035906 MetI-like superfamily XM56_18995 IPR000515 ABC transporter type 1, transmembrane domain MetI-like XM56_18995 IPR035906 MetI-like superfamily XM56_19000 IPR006059 Bacterial extracellular solute-binding protein XM56_19000 IPR006061 Solute-binding family 1, conserved site XM56_19035 IPR017871 ABC transporter, conserved site XM56_19035 IPR003439 ABC transporter-like XM56_19035 IPR003593 AAA+ ATPase domain XM56_19035 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein XM56_19035 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_19040 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_19040 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal XM56_19040 IPR017871 ABC transporter, conserved site XM56_19040 IPR003439 ABC transporter-like XM56_19040 IPR003593 AAA+ ATPase domain XM56_19045 IPR001851 ABC transporter, permease XM56_19045 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal XM56_19050 IPR001851 ABC transporter, permease XM56_19055 IPR028081 Leucine-binding protein domain XM56_19055 IPR000709 Leu/Ile/Val-binding protein XM56_19055 IPR028082 Periplasmic binding protein-like I XM56_19060 IPR032900 PanD regulatory factor PanZ XM56_19060 IPR016181 Acyl-CoA N-acyltransferase XM56_19060 IPR000182 GNAT domain XM56_19060 IPR040448 PanZ, acetyltransferase (GNAT) domain XM56_19075 IPR007630 RNA polymerase sigma-70 region 4 XM56_19075 IPR014284 RNA polymerase sigma-70 like domain XM56_19075 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_19075 IPR013324 RNA polymerase sigma factor, region 3/4-like XM56_19075 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria XM56_19075 IPR013325 RNA polymerase sigma factor, region 2 XM56_19075 IPR000943 RNA polymerase sigma-70 XM56_19075 IPR007627 RNA polymerase sigma-70 region 2 XM56_19075 IPR009042 RNA polymerase sigma-70 region 1.2 XM56_19080 IPR003838 ABC transporter permease protein domain XM56_19080 IPR004513 Cell division protein FtsX XM56_19080 IPR040690 FtsX, extracellular domain XM56_19085 IPR017871 ABC transporter, conserved site XM56_19085 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_19085 IPR005286 Cell division protein FtsE, ATP-binding XM56_19085 IPR003439 ABC transporter-like XM56_19085 IPR003593 AAA+ ATPase domain XM56_19090 IPR013822 Signal recognition particle SRP54, helical bundle XM56_19090 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_19090 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily XM56_19090 IPR036225 SRP/SRP receptor, N-terminal XM56_19090 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain XM56_19090 IPR003593 AAA+ ATPase domain XM56_19090 IPR004390 Signal-recognition particle receptor FtsY XM56_19095 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XM56_19095 IPR004398 RNA methyltransferase, RsmD XM56_19095 IPR002052 DNA methylase, N-6 adenine-specific, conserved site XM56_19100 IPR009525 Protein of unknown function DUF1145 XM56_19115 IPR012506 YhhN-like XM56_19120 IPR001757 P-type ATPase XM56_19120 IPR027256 P-type ATPase, subfamily IB XM56_19120 IPR018303 P-type ATPase, phosphorylation site XM56_19120 IPR006121 Heavy metal-associated domain, HMA XM56_19120 IPR017969 Heavy-metal-associated, conserved site XM56_19120 IPR023214 HAD superfamily XM56_19120 IPR036412 HAD-like superfamily XM56_19120 IPR023298 P-type ATPase, transmembrane domain superfamily XM56_19120 IPR008250 P-type ATPase, A domain superfamily XM56_19120 IPR036163 Heavy metal-associated domain superfamily XM56_19120 IPR023299 P-type ATPase, cytoplasmic domain N XM56_19125 IPR001455 TusA-like domain XM56_19125 IPR022931 Sulfur carrier protein TusA XM56_19125 IPR036868 TusA-like domain superfamily XM56_19130 IPR003744 Queuosine precursor transporter XM56_19135 IPR014894 Protein DcrB XM56_19135 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich XM56_19140 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain XM56_19140 IPR004017 Cysteine-rich domain XM56_19140 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site XM56_19140 IPR009051 Alpha-helical ferredoxin XM56_19140 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit XM56_19145 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit XM56_19145 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain XM56_19145 IPR036188 FAD/NAD(P)-binding domain superfamily XM56_19150 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase XM56_19150 IPR036188 FAD/NAD(P)-binding domain superfamily XM56_19150 IPR006076 FAD dependent oxidoreductase XM56_19150 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit XM56_19150 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily XM56_19150 IPR007419 BFD-like [2Fe-2S]-binding domain XM56_19155 IPR000849 Sugar phosphate transporter XM56_19155 IPR021159 Glycerate/sugar phosphate transporter, conserved site XM56_19155 IPR005267 Glycerol-3-phosphate transporter XM56_19155 IPR020846 Major facilitator superfamily domain XM56_19155 IPR011701 Major facilitator superfamily XM56_19155 IPR036259 MFS transporter superfamily XM56_19160 IPR030395 Glycerophosphodiester phosphodiesterase domain XM56_19160 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily XM56_19165 IPR000150 Cof family XM56_19165 IPR006379 HAD-superfamily hydrolase, subfamily IIB XM56_19165 IPR036412 HAD-like superfamily XM56_19165 IPR023214 HAD superfamily XM56_19170 IPR029058 Alpha/Beta hydrolase fold XM56_19170 IPR022742 Serine aminopeptidase, S33 XM56_19175 IPR004778 Homoserine/Threonine efflux protein XM56_19175 IPR001123 Amino acid exporter protein, LeuE-type XM56_19180 IPR001123 Amino acid exporter protein, LeuE-type XM56_19180 IPR004778 Homoserine/Threonine efflux protein XM56_19185 IPR002121 HRDC domain XM56_19185 IPR001650 Helicase, C-terminal XM56_19185 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain XM56_19185 IPR014001 Helicase superfamily 1/2, ATP-binding domain XM56_19185 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial XM56_19185 IPR004589 DNA helicase, ATP-dependent, RecQ type XM56_19185 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_19185 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_19185 IPR010997 HRDC-like superfamily XM56_19185 IPR011545 DEAD/DEAH box helicase domain XM56_19185 IPR018982 RQC domain XM56_19190 IPR036541 Phospholipase A1 superfamily XM56_19190 IPR003187 Phospholipase A1 XM56_19195 IPR003736 Phenylacetic acid degradation-related domain XM56_19195 IPR029069 HotDog domain superfamily XM56_19195 IPR006683 Thioesterase domain XM56_19200 IPR004626 RarD protein XM56_19200 IPR000620 EamA domain XM56_19205 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB XM56_19205 IPR004488 Magnesium/cobalt transport protein CorA XM56_19210 IPR013785 Aldolase-type TIM barrel XM56_19210 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily XM56_19210 IPR009215 TIM-barrel domain, IGPS-like XM56_19215 IPR008322 Uncharacterised protein family UPF0261 XM56_19225 IPR000212 DNA helicase, UvrD/REP type XM56_19225 IPR005753 DNA helicase, ATP-dependent, UvrD type XM56_19225 IPR014017 UvrD-like DNA helicase, C-terminal XM56_19225 IPR014016 UvrD-like helicase, ATP-binding domain XM56_19225 IPR034739 UvrD/AddA helicase, N-terminal XM56_19225 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_19225 IPR013986 DExx box DNA helicase domain superfamily XM56_19230 IPR023214 HAD superfamily XM56_19230 IPR006439 HAD hydrolase, subfamily IA XM56_19230 IPR041492 Haloacid dehalogenase-like hydrolase XM56_19230 IPR036412 HAD-like superfamily XM56_19235 IPR011931 Tyrosine recombinase XerC XM56_19235 IPR023009 Tyrosine recombinase XerC/XerD XM56_19235 IPR013762 Integrase-like, catalytic domain superfamily XM56_19235 IPR004107 Integrase, SAM-like, N-terminal XM56_19235 IPR010998 Integrase/recombinase, N-terminal XM56_19235 IPR002104 Integrase, catalytic domain XM56_19235 IPR011010 DNA breaking-rejoining enzyme, catalytic core XM56_19240 IPR007435 Protein of unknown function DUF484 XM56_19240 IPR029016 GAF-like domain superfamily XM56_19245 IPR018510 Diaminopimelate epimerase, active site XM56_19245 IPR001653 Diaminopimelate epimerase, DapF XM56_19250 IPR032831 Prokaryotic lipoprotein-attachment site XM56_19255 IPR020895 Frataxin conserved site XM56_19255 IPR036524 Frataxin/CyaY superfamily XM56_19255 IPR002908 Frataxin/CyaY XM56_19260 IPR000274 Adenylate cyclase, class-I XM56_19260 IPR024685 Adenylate cyclase class-I, N-terminal domain XM56_19260 IPR024686 Adenylate cyclase class-I, conserved site XM56_19265 IPR022418 Porphobilinogen deaminase, C-terminal XM56_19265 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily XM56_19265 IPR022417 Porphobilinogen deaminase, N-terminal XM56_19265 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site XM56_19265 IPR000860 Porphobilinogen deaminase XM56_19270 IPR039793 Uroporphyrinogen-III synthase XM56_19270 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase XM56_19270 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily XM56_19275 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX XM56_19280 IPR010817 HemY, N-terminal XM56_19280 IPR013026 Tetratricopeptide repeat-containing domain XM56_19280 IPR011990 Tetratricopeptide-like helical domain superfamily XM56_19280 IPR013105 Tetratricopeptide repeat 2 XM56_19280 IPR019734 Tetratricopeptide repeat XM56_19280 IPR005254 Heme biosynthesis-associated TPR protein XM56_19310 IPR004841 Amino acid permease/ SLC12A domain XM56_19310 IPR004840 Amino acid permease, conserved site XM56_19315 IPR004629 Glycosyl transferase WecB/TagA/CpsF XM56_19315 IPR023085 UDP-N-acetyl-D-mannosaminuronic acid transferase XM56_19320 IPR010691 Probable ECA polymerase WzyE XM56_19325 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase XM56_19330 IPR002797 Polysaccharide biosynthesis protein XM56_19330 IPR032896 Lipid III flippase WzxE XM56_19335 IPR032894 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE XM56_19335 IPR015421 Pyridoxal phosphate-dependent transferase, major domain XM56_19335 IPR015424 Pyridoxal phosphate-dependent transferase XM56_19335 IPR012749 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE-like XM56_19335 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase XM56_19335 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 XM56_19340 IPR000182 GNAT domain XM56_19340 IPR020683 Ankyrin repeat-containing domain XM56_19340 IPR002110 Ankyrin repeat XM56_19340 IPR016181 Acyl-CoA N-acyltransferase XM56_19340 IPR012752 dTDP-fucosamine acetyltransferase WecD XM56_19345 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form XM56_19345 IPR029044 Nucleotide-diphospho-sugar transferases XM56_19345 IPR005835 Nucleotidyl transferase domain XM56_19350 IPR016040 NAD(P)-binding domain XM56_19350 IPR036291 NAD(P)-binding domain superfamily XM56_19350 IPR005888 dTDP-glucose 4,6-dehydratase XM56_19355 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily XM56_19355 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase XM56_19355 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal XM56_19355 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation XM56_19355 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal XM56_19355 IPR017476 UDP-glucose/GDP-mannose dehydrogenase XM56_19355 IPR036291 NAD(P)-binding domain superfamily XM56_19355 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily XM56_19355 IPR032891 UDP-N-acetyl-D-mannosamine dehydrogenase WecC XM56_19360 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like XM56_19360 IPR032892 UDP-N-acetylglucosamine 2-epimerase WecB XM56_19360 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain XM56_19365 IPR032895 ECA polysaccharide chain length modulation protein WzzE XM56_19365 IPR003856 Polysaccharide chain length determinant N-terminal domain XM56_19370 IPR000715 Glycosyl transferase, family 4 XM56_19370 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase XM56_19380 IPR003593 AAA+ ATPase domain XM56_19380 IPR011112 Rho termination factor, N-terminal XM56_19380 IPR011129 Cold shock domain XM56_19380 IPR012340 Nucleic acid-binding, OB-fold XM56_19380 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_19380 IPR041703 Transcription termination factor Rho, ATP binding domain XM56_19380 IPR036269 Rho termination factor, N-terminal domain superfamily XM56_19380 IPR011113 Rho termination factor, RNA-binding domain XM56_19380 IPR004665 Transcription termination factor Rho XM56_19380 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain XM56_19385 IPR005746 Thioredoxin XM56_19385 IPR036249 Thioredoxin-like superfamily XM56_19385 IPR017937 Thioredoxin, conserved site XM56_19385 IPR013766 Thioredoxin domain XM56_19390 IPR001650 Helicase, C-terminal XM56_19390 IPR014001 Helicase superfamily 1/2, ATP-binding domain XM56_19390 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_19390 IPR014014 RNA helicase, DEAD-box type, Q motif XM56_19390 IPR023554 ATP-dependent RNA helicase RhlB type XM56_19390 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site XM56_19390 IPR011545 DEAD/DEAH box helicase domain XM56_19395 IPR022371 Exopolyphosphatase XM56_19395 IPR003695 Ppx/GppA phosphatase XM56_19395 IPR030673 Pyrophosphatase, GppA/Ppx-type XM56_19395 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase XM56_19400 IPR011050 Pectin lyase fold/virulence factor XM56_19400 IPR012334 Pectin lyase fold XM56_19400 IPR013783 Immunoglobulin-like fold XM56_19400 IPR000743 Glycoside hydrolase, family 28 XM56_19400 IPR036116 Fibronectin type III superfamily XM56_19400 IPR003961 Fibronectin type III XM56_19405 IPR005752 ATP-dependent DNA helicase Rep XM56_19405 IPR034739 UvrD/AddA helicase, N-terminal XM56_19405 IPR014016 UvrD-like helicase, ATP-binding domain XM56_19405 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_19405 IPR000212 DNA helicase, UvrD/REP type XM56_19405 IPR014017 UvrD-like DNA helicase, C-terminal XM56_19405 IPR013986 DExx box DNA helicase domain superfamily XM56_19410 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site XM56_19410 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type XM56_19420 IPR001829 Pili assembly chaperone, bacterial XM56_19420 IPR016148 Pili assembly chaperone, C-terminal XM56_19420 IPR018046 Pili assembly chaperone, conserved site XM56_19420 IPR016147 Pili assembly chaperone, N-terminal XM56_19420 IPR013783 Immunoglobulin-like fold XM56_19420 IPR036316 Pili assembly chaperone, C-terminal domain superfamily XM56_19420 IPR008962 PapD-like superfamily XM56_19425 IPR025885 PapC, N-terminal domain XM56_19425 IPR000015 Outer membrane usher protein XM56_19425 IPR018030 Fimbrial membrane usher, conserved site XM56_19425 IPR037224 PapC, N-terminal domain superfamily XM56_19425 IPR025949 PapC-like, C-terminal domain XM56_19425 IPR042186 Outer membrane usher protein FimD, plug domain XM56_19435 IPR036316 Pili assembly chaperone, C-terminal domain superfamily XM56_19435 IPR001829 Pili assembly chaperone, bacterial XM56_19435 IPR013783 Immunoglobulin-like fold XM56_19435 IPR016148 Pili assembly chaperone, C-terminal XM56_19435 IPR018046 Pili assembly chaperone, conserved site XM56_19435 IPR008962 PapD-like superfamily XM56_19435 IPR016147 Pili assembly chaperone, N-terminal XM56_19445 IPR000290 Colicin immunity protein/pyocin immunity protein XM56_19445 IPR035900 Colicin E immunity protein superfamily XM56_19450 IPR000290 Colicin immunity protein/pyocin immunity protein XM56_19450 IPR035900 Colicin E immunity protein superfamily XM56_19460 IPR013116 Ketol-acid reductoisomerase, N-terminal XM56_19460 IPR000506 Ketol-acid reductoisomerase, C-terminal XM56_19460 IPR013023 Ketol-acid reductoisomerase XM56_19460 IPR036291 NAD(P)-binding domain superfamily XM56_19460 IPR013328 6-phosphogluconate dehydrogenase, domain 2 XM56_19460 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily XM56_19465 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_19465 IPR037404 HTH-type transcriptional activator IlvY, PBP2 domain XM56_19465 IPR005119 LysR, substrate-binding XM56_19465 IPR000847 Transcription regulator HTH, LysR XM56_19465 IPR036390 Winged helix DNA-binding domain superfamily XM56_19485 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme XM56_19485 IPR005787 Threonine dehydratase, biosynthetic XM56_19485 IPR038110 Threonine dehydratase, ACT-like domain superfamily XM56_19485 IPR001926 Pyridoxal-phosphate dependent enzyme XM56_19485 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site XM56_19485 IPR001721 Threonine dehydratase, ACT-like domain XM56_19490 IPR004404 Dihydroxy-acid dehydratase XM56_19490 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase XM56_19490 IPR042096 Dihydroxy-acid dehydratase, C-terminal XM56_19490 IPR037237 IlvD/EDD, N-terminal domain XM56_19490 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site XM56_19495 IPR018300 Aminotransferase, class IV, conserved site XM56_19495 IPR001544 Aminotransferase class IV XM56_19495 IPR036038 Aminotransferase-like, PLP-dependent enzymes XM56_19495 IPR005785 Branched-chain amino acid aminotransferase I XM56_19495 IPR033939 Branched-chain aminotransferase XM56_19500 IPR002912 ACT domain XM56_19505 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain XM56_19505 IPR012000 Thiamine pyrophosphate enzyme, central domain XM56_19505 IPR029061 Thiamin diphosphate-binding fold XM56_19505 IPR029035 DHS-like NAD/FAD-binding domain superfamily XM56_19505 IPR000399 TPP-binding enzyme, conserved site XM56_19505 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding XM56_19505 IPR039368 Acetolactate synthase large subunit, TPP binding domain XM56_19505 IPR012846 Acetolactate synthase, large subunit, biosynthetic XM56_19510 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_19510 IPR004482 Mg chelatase-related protein XM56_19510 IPR025158 Mg chelatase-related protein, C-terminal domain XM56_19510 IPR000523 Magnesium chelatase ChlI domain XM56_19510 IPR020568 Ribosomal protein S5 domain 2-type fold XM56_19510 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 XM56_19510 IPR003593 AAA+ ATPase domain XM56_19515 IPR007335 Protein of unknown function DUF413 XM56_19520 IPR005119 LysR, substrate-binding XM56_19520 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_19520 IPR036390 Winged helix DNA-binding domain superfamily XM56_19520 IPR020890 Transcription regulator HTH, HdfR XM56_19520 IPR000847 Transcription regulator HTH, LysR XM56_19525 IPR001851 ABC transporter, permease XM56_19530 IPR001851 ABC transporter, permease XM56_19535 IPR017871 ABC transporter, conserved site XM56_19535 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_19535 IPR003593 AAA+ ATPase domain XM56_19535 IPR003439 ABC transporter-like XM56_19540 IPR025997 Periplasmic binding protein XM56_19540 IPR033893 ABC transporter periplasmic-binding protein YtfQ XM56_19540 IPR028082 Periplasmic binding protein-like I XM56_19580 IPR033134 Asp/Glu racemase, active site 2 XM56_19580 IPR018187 Asp/Glu racemase, active site 1 XM56_19580 IPR001920 Asp/Glu racemase XM56_19580 IPR015942 Asp/Glu/hydantoin racemase XM56_19580 IPR004391 Glutamate racemase XM56_19585 IPR039426 Vitamin B12 transporter BtuB-like XM56_19585 IPR010101 TonB-dependent vitamin B12 transporter BtuB XM56_19585 IPR012910 TonB-dependent receptor, plug domain XM56_19585 IPR037066 TonB-dependent receptor, plug domain superfamily XM56_19585 IPR000531 TonB-dependent receptor-like, beta-barrel XM56_19585 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily XM56_19585 IPR010917 TonB-dependent receptor, conserved site XM56_19590 IPR030391 RNA methyltransferase TrmA, conserved site XM56_19590 IPR030390 RNA methyltransferase TrmA, active site XM56_19590 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA XM56_19590 IPR010280 (Uracil-5)-methyltransferase family XM56_19590 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XM56_19595 IPR009867 Protein of unknown function DUF1422 XM56_19600 IPR009057 Homeobox-like domain superfamily XM56_19600 IPR001647 DNA-binding HTH domain, TetR-type XM56_19600 IPR023764 Transcriptional repressor HTH, FabR XM56_19605 IPR036188 FAD/NAD(P)-binding domain superfamily XM56_19605 IPR023753 FAD/NAD(P)-binding domain XM56_19605 IPR022962 Soluble pyridine nucleotide transhydrogenase XM56_19605 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily XM56_19605 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I XM56_19605 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain XM56_19610 IPR000847 Transcription regulator HTH, LysR XM56_19610 IPR036390 Winged helix DNA-binding domain superfamily XM56_19610 IPR005119 LysR, substrate-binding XM56_19610 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_19615 IPR011906 Glutaredoxin domain XM56_19615 IPR002109 Glutaredoxin XM56_19615 IPR014025 Glutaredoxin subgroup XM56_19615 IPR037944 Peroxiredoxin-5-like XM56_19615 IPR013740 Redoxin XM56_19615 IPR036249 Thioredoxin-like superfamily XM56_19615 IPR011767 Glutaredoxin active site XM56_19620 IPR023753 FAD/NAD(P)-binding domain XM56_19620 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site XM56_19620 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain XM56_19620 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I XM56_19620 IPR006258 Dihydrolipoamide dehydrogenase XM56_19620 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily XM56_19620 IPR036188 FAD/NAD(P)-binding domain superfamily XM56_19630 IPR010129 Type I secretion membrane fusion protein, HlyD family XM56_19630 IPR006144 Secretion protein HlyD, conserved site XM56_19635 IPR003593 AAA+ ATPase domain XM56_19635 IPR011527 ABC transporter type 1, transmembrane domain XM56_19635 IPR036640 ABC transporter type 1, transmembrane domain superfamily XM56_19635 IPR003439 ABC transporter-like XM56_19635 IPR017871 ABC transporter, conserved site XM56_19635 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_19635 IPR010128 ATPase, type I secretion system, PrtD XM56_19655 IPR011276 TonB-dependent haem/haemoglobin receptor XM56_19655 IPR012910 TonB-dependent receptor, plug domain XM56_19655 IPR039426 Vitamin B12 transporter BtuB-like XM56_19655 IPR000531 TonB-dependent receptor-like, beta-barrel XM56_19655 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor XM56_19655 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily XM56_19655 IPR037066 TonB-dependent receptor, plug domain superfamily XM56_19660 IPR008948 L-Aspartase-like XM56_19660 IPR022761 Fumarate lyase, N-terminal XM56_19660 IPR000362 Fumarate lyase family XM56_19660 IPR020557 Fumarate lyase, conserved site XM56_19660 IPR024083 Fumarase/histidase, N-terminal XM56_19660 IPR009049 Argininosuccinate lyase XM56_19660 IPR029419 Argininosuccinate lyase, C-terminal XM56_19665 IPR037528 Acetylglutamate kinase ArgB XM56_19665 IPR004662 Acetylglutamate kinase family XM56_19665 IPR041731 N-Acetyl-L-glutamate kinase, noncyclic XM56_19665 IPR036393 Acetylglutamate kinase-like superfamily XM56_19665 IPR001048 Aspartate/glutamate/uridylate kinase XM56_19670 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site XM56_19670 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 XM56_19670 IPR036291 NAD(P)-binding domain superfamily XM56_19670 IPR012280 Semialdehyde dehydrogenase, dimerisation domain XM56_19670 IPR000534 Semialdehyde dehydrogenase, NAD-binding XM56_19675 IPR011650 Peptidase M20, dimerisation domain XM56_19675 IPR010169 Acetylornithine deacetylase ArgE XM56_19675 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site XM56_19675 IPR036264 Bacterial exopeptidase dimerisation domain XM56_19675 IPR002933 Peptidase M20 XM56_19680 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site XM56_19680 IPR033129 Phosphoenolpyruvate carboxylase, His active site XM56_19680 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily XM56_19680 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type XM56_19680 IPR021135 Phosphoenolpyruvate carboxylase XM56_19685 IPR004620 5,10-methylenetetrahydrofolate reductase XM56_19685 IPR003171 Methylenetetrahydrofolate reductase XM56_19685 IPR029041 FAD-linked oxidoreductase-like XM56_19690 IPR018042 Aspartate kinase, conserved site XM56_19690 IPR036393 Acetylglutamate kinase-like superfamily XM56_19690 IPR001341 Aspartate kinase XM56_19690 IPR041743 Bifunctional aspartokinase/homoserine dehydrogenase, N-terminal catalytic domain XM56_19690 IPR001048 Aspartate/glutamate/uridylate kinase XM56_19690 IPR001342 Homoserine dehydrogenase, catalytic XM56_19690 IPR019811 Homoserine dehydrogenase, conserved site XM56_19690 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding XM56_19690 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I XM56_19690 IPR036291 NAD(P)-binding domain superfamily XM56_19695 IPR015421 Pyridoxal phosphate-dependent transferase, major domain XM56_19695 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 XM56_19695 IPR011821 O-succinylhomoserine (thiol)-lyase XM56_19695 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme XM56_19695 IPR015424 Pyridoxal phosphate-dependent transferase XM56_19700 IPR002084 Methionine repressor MetJ XM56_19700 IPR023453 Methionine repressor MetJ domain superfamily XM56_19700 IPR010985 Ribbon-helix-helix XM56_19705 IPR034704 L28p-like XM56_19705 IPR002150 Ribosomal protein L31 XM56_19705 IPR027491 Ribosomal protein L31 type A XM56_19705 IPR042105 Ribosomal protein L31 superfamily XM56_19710 IPR041236 Primosomal protein N, C-terminal domain XM56_19710 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain XM56_19710 IPR011545 DEAD/DEAH box helicase domain XM56_19710 IPR014001 Helicase superfamily 1/2, ATP-binding domain XM56_19710 IPR001650 Helicase, C-terminal XM56_19710 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_19710 IPR005259 Primosomal protein N' XM56_19710 IPR041222 Primosomal protein N', 3' DNA-binding domain XM56_19710 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily XM56_19715 IPR000843 LacI-type HTH domain XM56_19715 IPR010982 Lambda repressor-like, DNA-binding domain superfamily XM56_19715 IPR028082 Periplasmic binding protein-like I XM56_19720 IPR036680 Sporulation-like domain superfamily XM56_19720 IPR011930 Cell division protein FtsN XM56_19720 IPR007730 Sporulation-like domain XM56_19725 IPR022281 ATP-dependent protease, HslV subunit XM56_19725 IPR029055 Nucleophile aminohydrolases, N-terminal XM56_19725 IPR001353 Proteasome, subunit alpha/beta XM56_19725 IPR023333 Proteasome B-type subunit XM56_19730 IPR019489 Clp ATPase, C-terminal XM56_19730 IPR004491 Heat shock protein HslU XM56_19730 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_19730 IPR003593 AAA+ ATPase domain XM56_19730 IPR003959 ATPase, AAA-type, core XM56_19735 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase XM56_19735 IPR000537 UbiA prenyltransferase family XM56_19735 IPR026046 UbiA prenyltransferase domain containing protein 1 XM56_19740 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria XM56_19740 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily XM56_19740 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein XM56_19740 IPR010203 Regulator of ribonuclease activity A XM56_19745 IPR009252 Cell division protein ZapB XM56_19750 IPR000425 Major intrinsic protein XM56_19750 IPR022357 Major intrinsic protein, conserved site XM56_19750 IPR023271 Aquaporin-like XM56_19755 IPR005999 Glycerol kinase XM56_19755 IPR018483 Carbohydrate kinase, FGGY, conserved site XM56_19755 IPR018484 Carbohydrate kinase, FGGY, N-terminal XM56_19755 IPR018485 Carbohydrate kinase, FGGY, C-terminal XM56_19755 IPR000577 Carbohydrate kinase, FGGY XM56_19760 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase XM56_19765 IPR036259 MFS transporter superfamily XM56_19765 IPR020846 Major facilitator superfamily domain XM56_19765 IPR011701 Major facilitator superfamily XM56_19765 IPR004734 Multidrug resistance protein XM56_19780 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain XM56_19780 IPR017927 FAD-binding domain, ferredoxin reductase-type XM56_19780 IPR017938 Riboflavin synthase-like beta-barrel XM56_19780 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain XM56_19780 IPR001433 Oxidoreductase FAD/NAD(P)-binding XM56_19780 IPR033892 Ferredoxin--NADP reductase, bacteria XM56_19785 IPR008523 Protein of unknown function DUF805 XM56_19790 IPR009918 Protein of unknown function DUF1454 XM56_19795 IPR013785 Aldolase-type TIM barrel XM56_19795 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic XM56_19795 IPR035990 Triosephosphate isomerase superfamily XM56_19795 IPR000652 Triosephosphate isomerase XM56_19795 IPR020861 Triosephosphate isomerase, active site XM56_19805 IPR034408 Sulphate/thiosulphate-binding site XM56_19805 IPR005669 Thiosulphate/Sulfate-binding protein XM56_19805 IPR000957 Sulphate/thiosulphate-binding, conserved site XM56_19810 IPR022953 ATP-dependent 6-phosphofructokinase XM56_19810 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type XM56_19810 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic XM56_19810 IPR035966 Phosphofructokinase superfamily XM56_19810 IPR000023 Phosphofructokinase domain XM56_19810 IPR015912 Phosphofructokinase, conserved site XM56_19815 IPR027470 Cation efflux protein, cytoplasmic domain XM56_19815 IPR036837 Cation efflux protein, cytoplasmic domain superfamily XM56_19815 IPR023783 Cation efflux pump FieF XM56_19815 IPR027469 Cation efflux transmembrane domain superfamily XM56_19815 IPR002524 Cation efflux protein XM56_19820 IPR012899 LTXXQ motif family protein XM56_19825 IPR039420 Transcriptional regulatory protein WalR-like XM56_19825 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_19825 IPR001789 Signal transduction response regulator, receiver domain XM56_19825 IPR011006 CheY-like superfamily XM56_19825 IPR001867 OmpR/PhoB-type DNA-binding domain XM56_19830 IPR032404 Two-component sensor protein CpxA, periplasmic domain XM56_19830 IPR038515 CpxA, periplasmic domain superfamily XM56_19830 IPR003660 HAMP domain XM56_19830 IPR003594 Histidine kinase/HSP90-like ATPase XM56_19830 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XM56_19830 IPR005467 Histidine kinase domain XM56_19830 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain XM56_19830 IPR004358 Signal transduction histidine kinase-related protein, C-terminal XM56_19830 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily XM56_19835 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding XM56_19835 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily XM56_19835 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain XM56_19835 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site XM56_19835 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_19835 IPR009057 Homeobox-like domain superfamily XM56_19835 IPR035451 Ada-like domain superfamily XM56_19835 IPR004026 Ada DNA repair, metal-binding XM56_19835 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain XM56_19835 IPR018062 HTH domain AraC-type, conserved site XM56_19835 IPR016221 Bifunctional regulatory protein Ada XM56_19835 IPR018060 DNA binding HTH domain, AraC-type XM56_19840 IPR001537 tRNA/rRNA methyltransferase, SpoU type XM56_19840 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase XM56_19840 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal XM56_19840 IPR029028 Alpha/beta knot methyltransferases XM56_19845 IPR018357 Hexapeptide transferase, conserved site XM56_19845 IPR010493 Serine acetyltransferase, N-terminal XM56_19845 IPR001451 Hexapeptide repeat XM56_19845 IPR005881 Serine O-acetyltransferase XM56_19845 IPR042122 Serine acetyltransferase, N-terminal domain superfamily XM56_19845 IPR011004 Trimeric LpxA-like superfamily XM56_19850 IPR013328 6-phosphogluconate dehydrogenase, domain 2 XM56_19850 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal XM56_19850 IPR036291 NAD(P)-binding domain superfamily XM56_19850 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily XM56_19850 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal XM56_19850 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent XM56_19855 IPR035958 SecB-like superfamily XM56_19855 IPR003708 Bacterial protein export chaperone SecB XM56_19860 IPR014025 Glutaredoxin subgroup XM56_19860 IPR011900 Glutaredoxin, GrxC XM56_19860 IPR036249 Thioredoxin-like superfamily XM56_19860 IPR011767 Glutaredoxin active site XM56_19860 IPR002109 Glutaredoxin XM56_19865 IPR001763 Rhodanese-like domain XM56_19865 IPR036873 Rhodanese-like domain superfamily XM56_19870 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily XM56_19870 IPR006124 Metalloenzyme XM56_19870 IPR011258 BPG-independent PGAM, N-terminal XM56_19870 IPR017850 Alkaline-phosphatase-like, core domain superfamily XM56_19870 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent XM56_19875 IPR016047 Peptidase M23 XM56_19875 IPR011055 Duplicated hybrid motif XM56_19880 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel XM56_19880 IPR006837 Divergent polysaccharide deacetylase XM56_19900 IPR036291 NAD(P)-binding domain superfamily XM56_19900 IPR004627 L-threonine 3-dehydrogenase XM56_19900 IPR011032 GroES-like superfamily XM56_19900 IPR020843 Polyketide synthase, enoylreductase domain XM56_19900 IPR013154 Alcohol dehydrogenase, N-terminal XM56_19900 IPR013149 Alcohol dehydrogenase, C-terminal XM56_19900 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site XM56_19905 IPR015424 Pyridoxal phosphate-dependent transferase XM56_19905 IPR015421 Pyridoxal phosphate-dependent transferase, major domain XM56_19905 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 XM56_19905 IPR004839 Aminotransferase, class I/classII XM56_19905 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site XM56_19905 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase XM56_19910 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase XM56_19910 IPR036291 NAD(P)-binding domain superfamily XM56_19910 IPR001509 NAD-dependent epimerase/dehydratase XM56_19915 IPR002201 Glycosyl transferase, family 9 XM56_19915 IPR011910 ADP-heptose--LPS heptosyltransferase 2 XM56_19920 IPR002201 Glycosyl transferase, family 9 XM56_19920 IPR011908 Lipopolysaccharide heptosyltransferase I XM56_19925 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily XM56_19925 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal XM56_19925 IPR039901 3-deoxy-D-manno-octulosonic acid transferase XM56_19930 IPR001173 Glycosyltransferase 2-like XM56_19930 IPR029044 Nucleotide-diphospho-sugar transferases XM56_19935 IPR004821 Cytidyltransferase-like domain XM56_19935 IPR001980 Phosphopantetheine adenylyltransferase XM56_19935 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XM56_19940 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain XM56_19940 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site XM56_19940 IPR010663 Zinc finger, FPG/IleRS-type XM56_19940 IPR020629 Formamidopyrimidine-DNA glycosylase XM56_19940 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding XM56_19940 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type XM56_19940 IPR010979 Ribosomal protein S13-like, H2TH XM56_19940 IPR035937 MutM-like, N-terminal XM56_19945 IPR038584 Ribosomal protein L33 superfamily XM56_19945 IPR018264 Ribosomal protein L33, conserved site XM56_19945 IPR011332 Zinc-binding ribosomal protein XM56_19945 IPR001705 Ribosomal protein L33 XM56_19950 IPR001383 Ribosomal protein L28 XM56_19950 IPR037147 Ribosomal protein L28/L24 superfamily XM56_19950 IPR026569 Ribosomal protein L28/L24 XM56_19950 IPR034704 L28p-like XM56_19955 IPR022820 Uncharacterised protein family UPF0758, YicR subfamily XM56_19955 IPR037518 MPN domain XM56_19955 IPR025657 RadC-like JAB domain XM56_19955 IPR001405 Uncharacterised protein family UPF0758 XM56_19955 IPR010994 RuvA domain 2-like XM56_19955 IPR020891 Uncharacterised protein family UPF0758, conserved site XM56_19960 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC XM56_19960 IPR036551 Flavin prenyltransferase-like XM56_19960 IPR003382 Flavoprotein XM56_19960 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal XM56_19960 IPR035929 CoaB-like superfamily XM56_19965 IPR029054 dUTPase-like XM56_19965 IPR036157 dUTPase-like superfamily XM56_19965 IPR033704 dUTPase, trimeric XM56_19965 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase XM56_19970 IPR023772 DNA-binding HTH domain, TetR-type, conserved site XM56_19970 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily XM56_19970 IPR023769 Nucleoid occlusion factor SlmA XM56_19970 IPR001647 DNA-binding HTH domain, TetR-type XM56_19970 IPR009057 Homeobox-like domain superfamily XM56_19975 IPR023031 Orotate phosphoribosyltransferase XM56_19975 IPR004467 Orotate phosphoribosyl transferase domain XM56_19975 IPR029057 Phosphoribosyltransferase-like XM56_19975 IPR000836 Phosphoribosyltransferase domain XM56_19980 IPR002381 Ribonuclease PH, bacterial-type XM56_19980 IPR020568 Ribosomal protein S5 domain 2-type fold XM56_19980 IPR001247 Exoribonuclease, phosphorolytic domain 1 XM56_19980 IPR015847 Exoribonuclease, phosphorolytic domain 2 XM56_19980 IPR036345 Exoribonuclease, PH domain 2 superfamily XM56_19980 IPR018336 Ribonuclease PH, conserved site XM56_19980 IPR027408 PNPase/RNase PH domain superfamily XM56_19985 IPR013527 YicC-like, N-terminal XM56_19985 IPR005229 Conserved hypothetical protein CHP00255 XM56_19985 IPR013551 Domain of unknown function DUF1732 XM56_20000 IPR000160 GGDEF domain XM56_20000 IPR035919 EAL domain superfamily XM56_20000 IPR001633 EAL domain XM56_20000 IPR029787 Nucleotide cyclase XM56_20000 IPR035965 PAS domain superfamily XM56_20000 IPR000014 PAS domain XM56_20005 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site XM56_20005 IPR001753 Enoyl-CoA hydratase/isomerase XM56_20005 IPR014748 Enoyl-CoA hydratase, C-terminal XM56_20005 IPR029045 ClpP/crotonase-like domain superfamily XM56_20010 IPR002668 Concentrative nucleoside transporter N-terminal domain XM56_20010 IPR008276 Concentrative nucleoside transporter XM56_20010 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial XM56_20010 IPR011657 Concentrative nucleoside transporter C-terminal domain XM56_20010 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain XM56_20020 IPR005115 Uncharacterised domain UPF0126 XM56_20025 IPR020923 DNA ligase B XM56_20025 IPR010994 RuvA domain 2-like XM56_20025 IPR013840 NAD-dependent DNA ligase, N-terminal XM56_20025 IPR012340 Nucleic acid-binding, OB-fold XM56_20025 IPR004150 NAD-dependent DNA ligase, OB-fold XM56_20025 IPR013839 NAD-dependent DNA ligase, adenylation XM56_20030 IPR008145 Guanylate kinase/L-type calcium channel beta subunit XM56_20030 IPR017665 Guanylate kinase XM56_20030 IPR020590 Guanylate kinase, conserved site XM56_20030 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_20030 IPR008144 Guanylate kinase-like domain XM56_20035 IPR012293 RNA polymerase subunit, RPB6/omega XM56_20035 IPR036161 RPB6/omega subunit-like superfamily XM56_20035 IPR003716 DNA-directed RNA polymerase, omega subunit XM56_20035 IPR006110 RNA polymerase, subunit omega/K/RPB6 XM56_20040 IPR012675 Beta-grasp domain superfamily XM56_20040 IPR002912 ACT domain XM56_20040 IPR004095 TGS XM56_20040 IPR003607 HD/PDEase domain XM56_20040 IPR033655 RelA, TGS domain XM56_20040 IPR004811 RelA/SpoT family XM56_20040 IPR007685 RelA/SpoT XM56_20040 IPR012676 TGS-like XM56_20045 IPR029028 Alpha/beta knot methyltransferases XM56_20045 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal XM56_20045 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase XM56_20045 IPR001537 tRNA/rRNA methyltransferase, SpoU type XM56_20045 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal XM56_20050 IPR001650 Helicase, C-terminal XM56_20050 IPR012340 Nucleic acid-binding, OB-fold XM56_20050 IPR014001 Helicase superfamily 1/2, ATP-binding domain XM56_20050 IPR033454 RecG, wedge domain XM56_20050 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_20050 IPR004609 ATP-dependent DNA helicase RecG XM56_20050 IPR011545 DEAD/DEAH box helicase domain XM56_20060 IPR004445 Sodium/glutamate symport carrier protein GltS XM56_20065 IPR006042 Xanthine/uracil permease XM56_20065 IPR006043 Xanthine/uracil/vitamin C permease XM56_20070 IPR007844 AsmA XM56_20085 IPR038722 Ner, winged helix-turn-helix DNA-binding domain XM56_20085 IPR010982 Lambda repressor-like, DNA-binding domain superfamily XM56_20090 IPR012660 Thioesterase, putative XM56_20090 IPR016181 Acyl-CoA N-acyltransferase XM56_20090 IPR000182 GNAT domain XM56_20090 IPR029069 HotDog domain superfamily XM56_20095 IPR003732 D-aminoacyl-tRNA deacylase DTD XM56_20095 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily XM56_20100 IPR023679 Uncharacterised protein family UPF0761, bacterial XM56_20100 IPR017039 Virulence factor BrkB XM56_20105 IPR006439 HAD hydrolase, subfamily IA XM56_20105 IPR041492 Haloacid dehalogenase-like hydrolase XM56_20105 IPR023214 HAD superfamily XM56_20105 IPR023198 Phosphoglycolate phosphatase-like, domain 2 XM56_20105 IPR036412 HAD-like superfamily XM56_20115 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain XM56_20115 IPR036651 Glutamine synthetase, N-terminal domain superfamily XM56_20115 IPR027303 Glutamine synthetase, glycine-rich site XM56_20115 IPR004809 Glutamine synthetase type I XM56_20115 IPR001637 Glutamine synthetase class-I, adenylation site XM56_20115 IPR027302 Glutamine synthetase, N-terminal conserved site XM56_20115 IPR008146 Glutamine synthetase, catalytic domain XM56_20115 IPR008147 Glutamine synthetase, beta-Grasp domain XM56_20125 IPR004358 Signal transduction histidine kinase-related protein, C-terminal XM56_20125 IPR013767 PAS fold XM56_20125 IPR000014 PAS domain XM56_20125 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain XM56_20125 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XM56_20125 IPR003594 Histidine kinase/HSP90-like ATPase XM56_20125 IPR005467 Histidine kinase domain XM56_20125 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily XM56_20125 IPR035965 PAS domain superfamily XM56_20130 IPR025944 Sigma-54 interaction domain, conserved site XM56_20130 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 XM56_20130 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 XM56_20130 IPR011006 CheY-like superfamily XM56_20130 IPR002078 RNA polymerase sigma factor 54 interaction domain XM56_20130 IPR003593 AAA+ ATPase domain XM56_20130 IPR009057 Homeobox-like domain superfamily XM56_20130 IPR010114 DNA-binding transcriptional regulator NtrC XM56_20130 IPR002197 DNA binding HTH domain, Fis-type XM56_20130 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_20130 IPR001789 Signal transduction response regulator, receiver domain XM56_20135 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN XM56_20135 IPR034505 Anaerobic coproporphyrinogen-III oxidase XM56_20135 IPR006638 Elp3/MiaB/NifB XM56_20135 IPR010723 HemN, C-terminal XM56_20135 IPR007197 Radical SAM XM56_20135 IPR023404 Radical SAM, alpha/beta horseshoe XM56_20140 IPR007336 Der GTPase activator XM56_20145 IPR030393 EngB-type guanine nucleotide-binding (G) domain XM56_20145 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC XM56_20145 IPR006073 GTP binding domain XM56_20145 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_20150 IPR002562 3'-5' exonuclease domain XM56_20150 IPR008918 Helix-hairpin-helix motif, class 2 XM56_20150 IPR002298 DNA polymerase A XM56_20150 IPR018320 DNA polymerase 1 XM56_20150 IPR020045 DNA polymerase I-like, H3TH domain XM56_20150 IPR001098 DNA-directed DNA polymerase, family A, palm domain XM56_20150 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal XM56_20150 IPR012337 Ribonuclease H-like superfamily XM56_20150 IPR019760 DNA-directed DNA polymerase, family A, conserved site XM56_20150 IPR036397 Ribonuclease H superfamily XM56_20150 IPR036279 5'-3' exonuclease, C-terminal domain superfamily XM56_20150 IPR002421 5'-3' exonuclease, N-terminal XM56_20150 IPR029060 PIN-like domain superfamily XM56_20155 IPR017937 Thioredoxin, conserved site XM56_20155 IPR013766 Thioredoxin domain XM56_20155 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL XM56_20155 IPR036249 Thioredoxin-like superfamily XM56_20155 IPR001853 DSBA-like thioredoxin domain XM56_20160 IPR011009 Protein kinase-like domain superfamily XM56_20160 IPR002575 Aminoglycoside phosphotransferase XM56_20160 IPR032882 SrkA/RdoA protein kinase XM56_20165 IPR038134 YihD-like superfamily XM56_20165 IPR009383 Protein of unknown function DUF1040 XM56_20170 IPR029044 Nucleotide-diphospho-sugar transferases XM56_20170 IPR025877 MobA-like NTP transferase XM56_20170 IPR013482 Molybdenum cofactor guanylyltransferase XM56_20175 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain XM56_20175 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_20180 IPR036397 Ribonuclease H superfamily XM56_20180 IPR001584 Integrase, catalytic core XM56_20180 IPR025948 HTH-like domain XM56_20180 IPR012337 Ribonuclease H-like superfamily XM56_20215 IPR036390 Winged helix DNA-binding domain superfamily XM56_20215 IPR000524 Transcription regulator HTH, GntR XM56_20215 IPR008920 Transcription regulator FadR/GntR, C-terminal XM56_20215 IPR011711 GntR, C-terminal XM56_20215 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_20225 IPR000843 LacI-type HTH domain XM56_20225 IPR010982 Lambda repressor-like, DNA-binding domain superfamily XM56_20225 IPR028082 Periplasmic binding protein-like I XM56_20230 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site XM56_20230 IPR011877 Ribokinase XM56_20230 IPR011611 Carbohydrate kinase PfkB XM56_20230 IPR002139 Ribokinase/fructokinase XM56_20230 IPR029056 Ribokinase-like XM56_20235 IPR025997 Periplasmic binding protein XM56_20235 IPR028082 Periplasmic binding protein-like I XM56_20240 IPR001851 ABC transporter, permease XM56_20245 IPR015861 ABC transporter, ribose import, RbsA XM56_20245 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_20245 IPR003439 ABC transporter-like XM56_20245 IPR003593 AAA+ ATPase domain XM56_20245 IPR017871 ABC transporter, conserved site XM56_20250 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU XM56_20250 IPR023750 RbsD-like superfamily XM56_20250 IPR023064 D-ribose pyranase XM56_20255 IPR003855 Potassium transporter XM56_20255 IPR023051 Potassium uptake protein, low affinity, Kup XM56_20260 IPR011704 ATPase, dynein-related, AAA domain XM56_20260 IPR023671 ATPase RavA XM56_20260 IPR022547 ATPase, RavA, C-terminal XM56_20260 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_20260 IPR041538 ATPase RavA-like, AAA lid domain XM56_20260 IPR003593 AAA+ ATPase domain XM56_20265 IPR036465 von Willebrand factor A-like domain superfamily XM56_20265 IPR023481 Uncharacterised protein family ViaA XM56_20265 IPR008912 Uncharacterised protein family CoxE-like XM56_20265 IPR002035 von Willebrand factor, type A XM56_20275 IPR006195 Aminoacyl-tRNA synthetase, class II XM56_20275 IPR004618 Aspartate--ammonia ligase XM56_20280 IPR019885 Transcription regulator HTH, AsnC-type, conserved site XM56_20280 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain XM56_20280 IPR011991 ArsR-like helix-turn-helix domain XM56_20280 IPR000485 AsnC-type HTH domain XM56_20280 IPR011008 Dimeric alpha-beta barrel XM56_20280 IPR019888 Transcription regulator AsnC-type XM56_20280 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_20280 IPR036390 Winged helix DNA-binding domain superfamily XM56_20285 IPR008254 Flavodoxin/nitric oxide synthase XM56_20285 IPR029039 Flavoprotein-like superfamily XM56_20290 IPR036188 FAD/NAD(P)-binding domain superfamily XM56_20290 IPR026904 GidA associated domain 3 XM56_20290 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG XM56_20290 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related XM56_20290 IPR020595 MnmG-related, conserved site XM56_20295 IPR003682 rRNA small subunit methyltransferase G XM56_20295 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XM56_20300 IPR005598 ATP synthase protein I XM56_20305 IPR035908 ATP synthase, F0 complex, subunit A superfamily XM56_20305 IPR023011 ATP synthase, F0 complex, subunit A, active site XM56_20305 IPR000568 ATP synthase, F0 complex, subunit A XM56_20310 IPR000454 ATP synthase, F0 complex, subunit C XM56_20310 IPR038662 F1F0 ATP synthase subunit C superfamily XM56_20310 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site XM56_20310 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast XM56_20310 IPR002379 V-ATPase proteolipid subunit C-like domain XM56_20310 IPR035921 F/V-ATP synthase subunit C superfamily XM56_20315 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast XM56_20315 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily XM56_20315 IPR005864 ATP synthase, F0 complex, subunit b, bacterial XM56_20320 IPR000711 ATPase, OSCP/delta subunit XM56_20320 IPR020781 ATPase, OSCP/delta subunit, conserved site XM56_20320 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily XM56_20325 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily XM56_20325 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain XM56_20325 IPR005294 ATP synthase, F1 complex, alpha subunit XM56_20325 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site XM56_20325 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain XM56_20325 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily XM56_20325 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_20325 IPR000793 ATP synthase, alpha subunit, C-terminal XM56_20325 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain XM56_20325 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily XM56_20330 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily XM56_20330 IPR000131 ATP synthase, F1 complex, gamma subunit XM56_20330 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site XM56_20335 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain XM56_20335 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal XM56_20335 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_20335 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily XM56_20335 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain XM56_20335 IPR005722 ATP synthase, F1 complex, beta subunit XM56_20335 IPR003593 AAA+ ATPase domain XM56_20335 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site XM56_20340 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain XM56_20340 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily XM56_20340 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit XM56_20340 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal XM56_20340 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal XM56_20345 IPR018357 Hexapeptide transferase, conserved site XM56_20345 IPR025877 MobA-like NTP transferase XM56_20345 IPR029044 Nucleotide-diphospho-sugar transferases XM56_20345 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase XM56_20345 IPR011004 Trimeric LpxA-like superfamily XM56_20345 IPR001451 Hexapeptide repeat XM56_20345 IPR038009 GlmU, C-terminal LbH domain XM56_20350 IPR029055 Nucleophile aminohydrolases, N-terminal XM56_20350 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising XM56_20350 IPR035490 GlmS/FrlB, SIS domain 2 XM56_20350 IPR035466 GlmS/AgaS, SIS domain 1 XM56_20350 IPR001347 Sugar isomerase (SIS) XM56_20350 IPR017932 Glutamine amidotransferase type 2 domain XM56_20360 IPR024370 PBP domain XM56_20360 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS XM56_20365 IPR011864 Phosphate ABC transporter, permease protein PstC XM56_20365 IPR035906 MetI-like superfamily XM56_20365 IPR000515 ABC transporter type 1, transmembrane domain MetI-like XM56_20370 IPR000515 ABC transporter type 1, transmembrane domain MetI-like XM56_20370 IPR035906 MetI-like superfamily XM56_20370 IPR005672 Phosphate transport system permease protein PstA XM56_20375 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_20375 IPR015850 ABC transporter, phosphate import, PstB XM56_20375 IPR005670 Phosphate transport system permease protein 1 XM56_20375 IPR003593 AAA+ ATPase domain XM56_20375 IPR003439 ABC transporter-like XM56_20375 IPR017871 ABC transporter, conserved site XM56_20380 IPR038078 PhoU-like domain superfamily XM56_20380 IPR026022 PhoU domain XM56_20380 IPR028366 Phosphate transport system protein PhoU XM56_20390 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF XM56_20390 IPR018313 Solute-binding protein family 3, conserved site XM56_20390 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter XM56_20390 IPR001320 Ionotropic glutamate receptor XM56_20395 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain XM56_20395 IPR000515 ABC transporter type 1, transmembrane domain MetI-like XM56_20395 IPR035906 MetI-like superfamily XM56_20400 IPR035906 MetI-like superfamily XM56_20400 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain XM56_20400 IPR000515 ABC transporter type 1, transmembrane domain MetI-like XM56_20405 IPR006439 HAD hydrolase, subfamily IA XM56_20405 IPR023214 HAD superfamily XM56_20405 IPR041492 Haloacid dehalogenase-like hydrolase XM56_20405 IPR036412 HAD-like superfamily XM56_20405 IPR023198 Phosphoglycolate phosphatase-like, domain 2 XM56_20410 IPR006043 Xanthine/uracil/vitamin C permease XM56_20410 IPR026033 Azaguanine-like transporters XM56_20420 IPR016032 Signal transduction response regulator, C-terminal effector XM56_20420 IPR001789 Signal transduction response regulator, receiver domain XM56_20420 IPR000792 Transcription regulator LuxR, C-terminal XM56_20420 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_20420 IPR011006 CheY-like superfamily XM56_20425 IPR003594 Histidine kinase/HSP90-like ATPase XM56_20425 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XM56_20425 IPR005467 Histidine kinase domain XM56_20425 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain XM56_20425 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily XM56_20425 IPR029151 Periplasmic sensor-like domain superfamily XM56_20425 IPR004358 Signal transduction histidine kinase-related protein, C-terminal XM56_20430 IPR029039 Flavoprotein-like superfamily XM56_20430 IPR005025 NADPH-dependent FMN reductase-like XM56_20435 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain XM56_20435 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily XM56_20435 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding XM56_20435 IPR004090 Chemotaxis methyl-accepting receptor XM56_20435 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site XM56_20435 IPR003660 HAMP domain XM56_20440 IPR035906 MetI-like superfamily XM56_20440 IPR000515 ABC transporter type 1, transmembrane domain MetI-like XM56_20445 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain XM56_20445 IPR018449 NIL domain XM56_20445 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_20445 IPR017871 ABC transporter, conserved site XM56_20445 IPR003439 ABC transporter-like XM56_20445 IPR026253 Methionine import ATP-binding protein MetN XM56_20445 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal XM56_20445 IPR003593 AAA+ ATPase domain XM56_20455 IPR024906 Enoyl reductase FAD binding domain XM56_20455 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative XM56_20455 IPR010758 Trans-2-enoyl-CoA reductase XM56_20460 IPR005225 Small GTP-binding protein domain XM56_20460 IPR027368 tRNA modification GTPase MnmE domain 2 XM56_20460 IPR004520 tRNA modification GTPase MnmE XM56_20460 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 XM56_20460 IPR031168 TrmE-type guanine nucleotide-binding domain XM56_20460 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_20460 IPR025867 MnmE, helical domain XM56_20460 IPR006073 GTP binding domain XM56_20460 IPR018948 GTP-binding protein TrmE, N-terminal XM56_20465 IPR038221 YidC, periplasmic domain superfamily XM56_20465 IPR019998 Membrane insertase YidC XM56_20465 IPR028055 Membrane insertase YidC/Oxa1, C-terminal XM56_20465 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 XM56_20465 IPR038210 Membrane insertase YidC, periplasmic domain XM56_20465 IPR028053 Membrane insertase YidC, N-terminal XM56_20470 IPR002696 Putative membrane protein insertion efficiency factor XM56_20475 IPR020539 Ribonuclease P, conserved site XM56_20475 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup XM56_20475 IPR000100 Ribonuclease P XM56_20475 IPR020568 Ribosomal protein S5 domain 2-type fold XM56_20480 IPR020939 Ribosomal protein L34, conserved site XM56_20480 IPR000271 Ribosomal protein L34 XM56_20490 IPR019661 Replication regulatory protein RepA2 XM56_20495 IPR003446 Plasmid replication initiation, RepA XM56_20495 IPR017837 Plasmid replication initiator, RepA, IncFII type XM56_20510 IPR003547 Serine/threonine protein kinase, yersinia-type XM56_20510 IPR008271 Serine/threonine-protein kinase, active site XM56_20510 IPR019093 Rac1-binding domain XM56_20510 IPR000719 Protein kinase domain XM56_20510 IPR011009 Protein kinase-like domain superfamily XM56_20520 IPR008874 Enterobacterial TraT complement resistance XM56_20530 IPR016505 Type III secretion system YopQ XM56_20535 IPR006473 Peptidase C58, YopT-type domain XM56_20535 IPR038765 Papain-like cysteine peptidase superfamily XM56_20535 IPR003951 Peptidase C58, Yersinia/Haemophilus virulence surface antigen XM56_20540 IPR010261 Tir chaperone protein (CesT) family XM56_20545 IPR002514 Transposase IS3/IS911family XM56_20545 IPR009057 Homeobox-like domain superfamily XM56_20570 IPR032675 Leucine-rich repeat domain superfamily XM56_20570 IPR032674 LRR-containing bacterial E3 ligase, N-terminal XM56_20570 IPR001611 Leucine-rich repeat XM56_20570 IPR032675 Leucine-rich repeat domain superfamily XM56_20570 IPR032674 LRR-containing bacterial E3 ligase, N-terminal XM56_20570 IPR001611 Leucine-rich repeat XM56_20580 IPR001207 Transposase, mutator type XM56_20585 IPR008898 YopD-like XM56_20590 IPR006972 Secretion system effector C, SseC-like XM56_20595 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD XM56_20595 IPR016379 Type III secretion system, low calcium response, chaperone LcrH/SycD, subgroup XM56_20595 IPR013026 Tetratricopeptide repeat-containing domain XM56_20595 IPR011990 Tetratricopeptide-like helical domain superfamily XM56_20595 IPR011716 Tetratricopeptide TPR-3 XM56_20600 IPR005413 Low calcium response V antigen XM56_20600 IPR036139 Virulence-associated V antigen superfamily XM56_20605 IPR009863 Type III secretion protein, LcrG XM56_20610 IPR013405 Type III secretion system regulator, LcrR XM56_20610 IPR022797 Type III secretion system regulator LcrR/Chaperone CesD2 XM56_20615 IPR042194 FHIPEP, domain 1 XM56_20615 IPR042193 FHIPEP, domain 3 XM56_20615 IPR006302 Type III secretion protein HrcV XM56_20615 IPR001712 Type III secretion system FHIPEP XM56_20615 IPR042196 FHIPEP, domain 4 XM56_20615 IPR025505 FHIPEP conserved site XM56_20620 IPR016684 Type III secretion system chaperone, YscY XM56_20620 IPR011990 Tetratricopeptide-like helical domain superfamily XM56_20625 IPR012672 Type III secretion system YscX XM56_20630 IPR012673 Type III secretion system chaperone SycN XM56_20635 IPR013351 Type III secretion system effector delivery regulator TyeA-related XM56_20635 IPR038347 TyeA superfamily XM56_20635 IPR015144 Type III secretion system effector delivery regulator TyeA XM56_20640 IPR010812 Hypersensitivity response secretion-like, HrpJ XM56_20640 IPR013401 Type III secretion regulator, YopN/LcrE/InvE/MxiC XM56_20645 IPR040627 T3SS EscN ATPase, C-terminal XM56_20645 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_20645 IPR013380 ATPase, type III secretion system, H+-transporting XM56_20645 IPR005714 ATPase, type III secretion system, FliI/YscN XM56_20645 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain XM56_20645 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site XM56_20645 IPR003593 AAA+ ATPase domain XM56_20645 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain XM56_20650 IPR009929 Type III secretion sytem,YscO XM56_20655 IPR021136 Flagellar hook-length control protein-like, C-terminal XM56_20655 IPR013354 Type III secretion system needle length determinant, C-terminal domain XM56_20660 IPR036429 SpoA-like superfamily XM56_20660 IPR003283 Type III secretion system outer membrane, SpaO XM56_20660 IPR001543 Surface presentation of antigen (SpoA) XM56_20660 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO XM56_20665 IPR005838 Type III secretion system inner membrane P protein XM56_20665 IPR005773 Yop virulence translocation protein R XM56_20670 IPR006306 Type III secretion protein HrpO XM56_20670 IPR002191 Bacterial export protein family 3 XM56_20675 IPR006304 Type III secretion protein SpaR/YscT XM56_20675 IPR002010 Type III secretion system inner membrane R protein XM56_20680 IPR006135 Type III secretion system substrate exporter XM56_20680 IPR029025 Type III secretion system substrate exporter, C-terminal XM56_20680 IPR006307 Type III exporter system, secretion apparatus protein BsaZ XM56_20690 IPR009057 Homeobox-like domain superfamily XM56_20690 IPR020449 Transcription regulator HTH, AraC- type XM56_20690 IPR018062 HTH domain AraC-type, conserved site XM56_20690 IPR018060 DNA binding HTH domain, AraC-type XM56_20690 IPR037923 Transcription regulator HTH-like XM56_20695 IPR035181 Protein of unknown function DUF5463 XM56_20700 IPR010261 Tir chaperone protein (CesT) family XM56_20700 IPR013353 Type III secretion system chaperone YscB XM56_20710 IPR000253 Forkhead-associated (FHA) domain XM56_20710 IPR008984 SMAD/FHA domain superfamily XM56_20710 IPR032034 Yop protein translocation protein D, periplasmic domain XM56_20710 IPR012843 Type III secretion system YscD/HrpQ XM56_20710 IPR032030 YscD, cytoplasmic domain XM56_20715 IPR012671 Type III secretion system, secretion protein E XM56_20720 IPR021123 Type III secretion, needle-protein-like XM56_20720 IPR037203 Type III secretion, needle-protein-like superfamily XM56_20720 IPR011841 Type III secretion system, needle protein XM56_20725 IPR013348 Type III secretion system YscG XM56_20725 IPR011990 Tetratricopeptide-like helical domain superfamily XM56_20730 IPR013349 Type III secretion system effector YopR XM56_20730 IPR041814 Type III secretion system virulence factor YopR, core domain XM56_20735 IPR012670 Type III secretion system, YscI/HrpB XM56_20740 IPR006182 Secretory protein YscJ/FliF XM56_20740 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ XM56_20745 IPR009510 Type III secretion system, secretion protein K XM56_20750 IPR012842 Type III secretion system HrpE/YscL XM56_20750 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE XM56_20755 IPR036484 Protein-tyrosine phosphatase, YopH, N-terminal domain superfamily XM56_20755 IPR015103 Protein-tyrosine phosphatase, YopH, N-terminal XM56_20765 IPR000387 Tyrosine specific protein phosphatases domain XM56_20765 IPR003546 Type III secreted modular tyrosine phosphatase, SptP/YopH XM56_20765 IPR003595 Protein-tyrosine phosphatase, catalytic XM56_20765 IPR029021 Protein-tyrosine phosphatase-like XM56_20765 IPR015103 Protein-tyrosine phosphatase, YopH, N-terminal XM56_20765 IPR036484 Protein-tyrosine phosphatase, YopH, N-terminal domain superfamily XM56_20765 IPR016130 Protein-tyrosine phosphatase, active site XM56_20765 IPR000242 PTP type protein phosphatase XM56_20780 IPR009057 Homeobox-like domain superfamily XM56_20780 IPR002514 Transposase IS3/IS911family XM56_20785 IPR010261 Tir chaperone protein (CesT) family XM56_20785 IPR005416 Type III secretion chaperone SycE XM56_20790 IPR014773 Virulence factor YopE, GAP domain XM56_20790 IPR037168 Virulence factor YopE, GAP domain superfamily XM56_20790 IPR003537 Yersinia virulence determinant YopE XM56_20790 IPR015110 YopE, N-terminal domain XM56_20800 IPR038296 Antitoxin ParD superfamily XM56_20800 IPR010985 Ribbon-helix-helix XM56_20800 IPR022789 Antitoxin ParD XM56_20805 IPR040873 SopB, HTH domain XM56_20805 IPR036086 ParB/Sulfiredoxin superfamily XM56_20805 IPR003115 ParB/Sulfiredoxin XM56_20805 IPR004437 ParB/RepB/Spo0J partition protein XM56_20810 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_20810 IPR025669 AAA domain XM56_20830 IPR002514 Transposase IS3/IS911family XM56_20830 IPR009057 Homeobox-like domain superfamily XM56_20840 IPR015103 Protein-tyrosine phosphatase, YopH, N-terminal XM56_20840 IPR036484 Protein-tyrosine phosphatase, YopH, N-terminal domain superfamily XM56_20855 IPR008640 Head domain of trimeric autotransporter adhesin XM56_20855 IPR005594 YadA-like, C-terminal XM56_20855 IPR008635 Coiled stalk of trimeric autotransporter adhesin XM56_20855 IPR008126 Outer membrane adhesion, Yersinia XM56_20855 IPR011049 Serralysin-like metalloprotease, C-terminal XM56_20860 IPR000620 EamA domain XM56_20870 IPR025296 Domain of unknown function DUF4158 XM56_20870 IPR002513 Tn3 transposase DDE domain XM56_20870 IPR025296 Domain of unknown function DUF4158 XM56_20870 IPR002513 Tn3 transposase DDE domain XM56_20875 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily XM56_20875 IPR006119 Resolvase, N-terminal catalytic domain XM56_20875 IPR006118 Recombinase, conserved site XM56_20875 IPR009057 Homeobox-like domain superfamily XM56_20875 IPR006120 Resolvase, HTH domain XM56_20880 IPR006659 Arsenate reductase XM56_20880 IPR036249 Thioredoxin-like superfamily XM56_20880 IPR006660 Arsenate reductase-like XM56_20885 IPR000802 Arsenical pump membrane protein, ArsB XM56_20890 IPR018334 ArsR-type transcription regulator, HTH motif XM56_20890 IPR001845 HTH ArsR-type DNA-binding domain XM56_20890 IPR036388 Winged helix-like DNA-binding domain superfamily XM56_20890 IPR036390 Winged helix DNA-binding domain superfamily XM56_20890 IPR011991 ArsR-like helix-turn-helix domain XM56_20895 IPR005025 NADPH-dependent FMN reductase-like XM56_20895 IPR029039 Flavoprotein-like superfamily XM56_20895 IPR014063 Arsenate resistance ArsH XM56_20900 IPR014059 Conjugative relaxase, N-terminal XM56_20900 IPR040668 TraI, 2B/2B-like domain XM56_20900 IPR009767 DNA helicase, TraI type XM56_20900 IPR027417 P-loop containing nucleoside triphosphate hydrolase XM56_20900 IPR040987 TraI, N-terminal subdomain XM56_20900 IPR014862 TrwC relaxase XM56_20900 IPR014129 Conjugative transfer relaxase protein TraI XM56_20910 IPR009057 Homeobox-like domain superfamily XM56_20910 IPR002514 Transposase IS3/IS911family