locus_tag old_locus_tag gene Name start end strand product note type ID NCBI XM56_00005 XM56_00005 dnaA dnaA 1 1389 + chromosomal replication initiation protein binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication%3B can also affect transcription of multiple genes including itself. gene gene0 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00005 XM56_00010 XM56_00010 XM56_00010 1394 2494 + DNA polymerase III subunit beta binds the polymerase to DNA and acts as a sliding clamp gene gene1 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00010 XM56_00015 XM56_00015 recF recF 2667 3752 + recombination protein F Required for DNA replication%3B binds preferentially to single-stranded%2C linear DNA gene gene2 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00015 XM56_00020 XM56_00020 gyrB gyrB 3772 6186 + DNA gyrase subunit B negatively supercoils closed circular double-stranded DNA gene gene3 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00020 XM56_00025 XM56_00025 XM56_00025 6358 7167 + sugar phosphatase YidA%3B catalyzes the dephosphorylation of erythrose 4-phosphate (preferred substrate)%2C mannose 1-phosphate and p-nitrophenyl phosphate%3B hydrolyzes the alpha-D-glucose-1-phosphate but not the beta form%3B member of the haloacid dehalogenase-like hydrolases superfamily and Cof family of proteins gene gene4 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00025 XM56_00030 XM56_00030 XM56_00030 7349 8287 - ornithine cyclodeaminase catalyzes the formation of L-proline from L-ornithine gene gene5 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00030 XM56_00035 XM56_00035 XM56_00035 8284 9243 - hypothetical protein gene gene6 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00035 XM56_00040 XM56_00040 XM56_00040 9385 10686 + biopolymer transporter Tol gene gene7 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00040 XM56_00045 XM56_00045 XM56_00045 10688 11026 - hypothetical protein gene gene8 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00045 XM56_00050 XM56_00050 XM56_00050 11410 11823 + heat shock protein IbpA with IbpB associates with aggregated proteins to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress gene gene9 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00050 XM56_00055 XM56_00055 XM56_00055 11948 12421 + molecular chaperone gene gene10 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00055 XM56_00060 XM56_00060 XM56_00060 13107 14768 + transporter gene gene11 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00060 XM56_00065 XM56_00065 avtA avtA 14849 16102 - valine--pyruvate aminotransferase transaminase C%3B catalyzes transamination of alanine%2C valine%2C and 2-aminobutyrate with their respective 2-keto acids%3B also catalyzes terminal step in valine biosynthesis gene gene12 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00065 XM56_00070 XM56_00070 malS malS 16237 18303 - alpha-amylase periplasmic enzyme that degrades maltodextrins that enter via the outer membrane porin LamB%3B hydrolyzes alpha-(1%2C4) glycosidic linkages%3B contains internal disulfide bonds gene gene13 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00070 XM56_00075 XM56_00075 XM56_00075 18457 19437 - bifunctional glyoxylate/hydroxypyruvate reductase B catalyzes the formation of glycolate from glyoxylate and glycerate from hydroxypyruvate gene gene14 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00075 XM56_00080 XM56_00080 XM56_00080 19741 21183 - MFS transporter gene gene15 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00080 XM56_00085 XM56_00085 XM56_00085 21369 22013 + transcriptional regulator gene gene16 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00085 XM56_00090 XM56_00090 XM56_00090 22060 24237 - hypothetical protein gene gene17 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00090 XM56_00095 XM56_00095 XM56_00095 24346 26535 - hypothetical protein gene gene18 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00095 XM56_00100 XM56_00100 XM56_00100 26562 28598 - hypothetical protein gene gene19 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00100 XM56_00105 XM56_00105 XM56_00105 28832 29296 - acetyltransferase gene gene20 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00105 XM56_00110 XM56_00110 XM56_00110 29293 29865 - DNA-3-methyladenine glycosidase gene gene21 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00110 XM56_00115 XM56_00115 XM56_00115 30121 31035 + glycyl-tRNA synthetase gene gene22 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00115 XM56_00120 XM56_00120 glyS glyS 31045 33114 + glycyl-tRNA ligase glycine--tRNA ligase beta chain%3B glyS%3B class II aminoacyl tRNA synthetase%3B tetramer of alpha(2)beta(2)%3B catalyzes a two-step reaction%3B first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP%3B second by transfer of the aminoacyl-adenylate to its tRNA gene gene23 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00120 XM56_00125 XM56_00125 XM56_00125 33237 33956 + hypothetical protein gene gene24 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00125 XM56_00130 XM56_00130 XM56_00130 35100 37022 + PTS system mannitol-specific transporter subunit IICBA catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B subunit IIC forms the translocation channel and contains the specific substrate-binding site%3B subunit IIA is phosphorylated and transfers the phosphoryl group to the IIB subunit%3B subunit IIB transfers the phosphoryl group to the substrate gene gene25 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00130 XM56_00135 XM56_00135 XM56_00135 37287 38450 + mannitol-1-phosphate 5-dehydrogenase gene gene26 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00135 XM56_00140 XM56_00140 XM56_00140 38681 39235 + transcriptional regulator gene gene27 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00140 XM56_00145 XM56_00145 XM56_00145 39232 39843 - membrane protein gene gene28 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00145 XM56_00150 XM56_00150 XM56_00150 40111 41592 + GntR family transcriptional regulator gene gene29 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00150 XM56_00155 XM56_00155 XM56_00155 41685 42041 + hypothetical protein gene gene30 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00155 XM56_00160 XM56_00160 XM56_00160 42173 42400 + AbrB family transcriptional regulator gene gene31 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00160 XM56_00165 XM56_00165 XM56_00165 42397 42816 + twitching motility protein PilT gene gene32 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00165 XM56_00170 XM56_00170 XM56_00170 42970 43641 - 6-N-hydroxylaminopurine resistance protein gene gene33 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00170 XM56_00175 XM56_00175 XM56_00175 43720 45669 - chemotaxis protein gene gene34 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00175 XM56_00180 XM56_00180 XM56_00180 46154 46777 - superoxide dismutase SodA%3B manganese binding%3B only present under aerobic conditions%3B destroys free radicals gene gene35 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00180 XM56_00185 XM56_00185 XM56_00185 46904 47758 - formate dehydrogenase gene gene36 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00185 XM56_00190 XM56_00190 XM56_00190 47942 48529 + sulfate ABC transporter substrate-binding protein gene gene37 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00190 XM56_00195 XM56_00195 XM56_00195 48578 50989 + formate dehydrogenase gene gene38 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00195 XM56_00200 XM56_00200 XM56_00200 51002 51973 + formate dehydrogenase beta subunit%3B involved in the use of formate as an electron donor during aerobic respiration%3B acts to transfer electrons from the major(alpha subunit) to the cytochrome b556(gamma subunit) gene gene39 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00200 XM56_00205 XM56_00205 XM56_00205 51970 52620 + formate dehydrogenase cytochrome b556(FDO) component%3B heme containing gene gene40 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00205 XM56_00210 XM56_00210 XM56_00210 52620 53549 + formate dehydrogenase required for the formation of active formate dehydrogenase gene gene41 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00210 XM56_00215 XM56_00215 XM56_00215 53581 54969 + selenocysteine synthase catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis gene gene42 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00215 XM56_00220 XM56_00220 XM56_00220 54966 56858 + selenocysteinyl-tRNA-specific translation factor gene gene43 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00220 XM56_00225 XM56_00225 XM56_00225 56924 58153 - multidrug transporter gene gene44 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00225 XM56_00230 XM56_00230 XM56_00230 58602 59594 + acetyltransferase involved in enterobacterial common antigen biosynthesis%3B catalyzes the addition of O-acetyl groups to the N-acetyl-D-glucosamine residues of the trisaccharide repeat units of the enterobacterial common antigen gene gene45 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00230 XM56_00235 XM56_00235 XM56_00235 59587 60513 - AraC family transcriptional regulator gene gene46 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00235 XM56_00240 XM56_00240 XM56_00240 60516 61544 - isochorismatase gene gene47 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00240 XM56_00245 XM56_00245 XM56_00245 61779 62546 + fimbrial assembly protein gene gene48 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00245 XM56_00250 XM56_00250 XM56_00250 62596 64056 - xylulose kinase catalyzes the formation of D-xylulose-5-phosphate fro D-xylulose gene gene49 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00250 XM56_00255 XM56_00255 XM56_00255 64251 65570 - xylose isomerase catalyzes the interconversion of D-xylose to D-xylulose gene gene50 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00255 XM56_00260 XM56_00260 xylF xylF 65949 66944 + D-xylose transporter subunit XylF periplasmic substrate-binding component of the ATP-dependent xylose transport system%3B high affinity gene gene51 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00260 XM56_00265 XM56_00265 XM56_00265 67036 68568 + xylose transporter with XylFH is part of the high affinity xylose ABC transporter gene gene52 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00265 XM56_00270 XM56_00270 XM56_00270 68555 69739 + sugar ABC transporter permease gene gene53 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00270 XM56_00275 XM56_00275 XM56_00275 69823 71016 + XylR family transcriptional regulator gene gene54 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00275 XM56_00280 XM56_00280 XM56_00280 71406 72575 + integrase gene gene55 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00280 XM56_00285 XM56_00285 XM56_00285 72581 75100 + hypothetical protein gene gene56 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00285 XM56_00290 XM56_00290 XM56_00290 75822 76154 - aldehyde dehydrogenase gene gene57 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00290 XM56_00295 XM56_00295 XM56_00295 76154 76315 - aldehyde dehydrogenase gene gene58 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00295 XM56_00300 XM56_00300 XM56_00300 76504 78012 + transposase gene gene59 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00300 XM56_00305 XM56_00305 XM56_00305 77999 78724 + ATPase gene gene60 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00305 XM56_00310 XM56_00310 proY proY 79372 80769 - proline-specific permease cryptic permease that may be involved in the transport of proline across the inner membrane%3B in Salmonella typhimurium%2C the proY gene is silent unless overexpressed on a multicopy plasmid or activated by a proZ mutation gene gene61 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00310 XM56_00315 XM56_00315 XM56_00315 80879 82414 - histidine ammonia-lyase catalyzes the degradation of histidine to urocanate and ammmonia gene gene62 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00315 XM56_00320 XM56_00320 XM56_00320 82411 84102 - urocanate hydratase catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism gene gene63 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00320 XM56_00325 XM56_00325 XM56_00325 84471 84647 - hypothetical protein gene gene64 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00325 XM56_00330 XM56_00330 XM56_00330 85173 87626 - fimbrial assembly protein gene gene65 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00330 XM56_00335 XM56_00335 XM56_00335 88766 89959 - mannose-6-phosphate isomerase gene gene66 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00335 XM56_00340 XM56_00340 XM56_00340 89981 91381 - 6-phospho-beta-glucosidase gene gene67 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00340 XM56_00345 XM56_00345 XM56_00345 91452 93644 - beta-1%2C4 mannanase gene gene68 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00345 XM56_00350 XM56_00350 maltoporin maltoporin 93655 94990 - disrupted pseudogene gene69 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00350 XM56_00355 XM56_00355 XM56_00355 95234 96508 - cytochrome C biogenesis protein CcmF gene gene70 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00355 XM56_00360 XM56_00360 XM56_00360 96693 97007 + PTS lactose transporter subunit IIB gene gene71 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00360 XM56_00365 XM56_00365 XM56_00365 97018 98343 + cytochrome C biogenesis protein CcmF gene gene72 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00365 XM56_00370 XM56_00370 XM56_00370 98374 98679 + molecular chaperone TorD gene gene73 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00370 XM56_00375 XM56_00375 XM56_00375 98755 99675 + transcriptional regulator gene gene74 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00375 XM56_00380 XM56_00380 XM56_00380 99760 100722 + transcriptional regulator gene gene75 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00380 XM56_00385 XM56_00385 XM56_00385 100756 101229 - acetyltransferase gene gene76 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00385 XM56_00390 XM56_00390 XM56_00390 102779 103828 - transposase gene gene77 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00390 XM56_00395 XM56_00395 XM56_00395 103835 104695 - restriction methylase gene gene78 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00395 XM56_00400 XM56_00400 XM56_00400 104924 105292 - toxin YkfI gene gene79 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00400 XM56_00405 XM56_00405 XM56_00405 105577 106779 + transposase gene gene80 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00405 XM56_00410 XM56_00410 XM56_00410 106954 108417 + membrane protein gene gene81 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00410 XM56_00415 XM56_00415 XM56_00415 108650 110056 - heme utilization protein gene gene82 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00415 XM56_00420 XM56_00420 XM56_00420 110176 111888 - hemolysin secretion protein ShlB gene gene83 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00420 XM56_00425 XM56_00425 XM56_00425 112020 113225 - heme utilization protein gene gene84 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00425 XM56_00430 XM56_00430 hypothetical protein hypothetical protein 113314 113538 - disrupted pseudogene gene85 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00430 XM56_00435 XM56_00435 XM56_00435 113535 113611 - tRNA-Pro tRNA gene86 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00435 XM56_00440 XM56_00440 XM56_00440 113728 115059 - MFS transporter gene gene87 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00440 XM56_00445 XM56_00445 XM56_00445 115153 116685 - histidine kinase gene gene88 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00445 XM56_00450 XM56_00450 XM56_00450 116682 117272 - transcriptional regulator response regulator in two-component regulatory system wtih UhpB%3B phosphorylated UhpA is a positive activator uhpT%2C a hexose phosphates transporter gene gene89 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00450 XM56_00455 XM56_00455 XM56_00455 117384 119075 - phosphoethanolamine transferase catalyzes the addition of a phosphoethanolamine group to the outer Kdo residue of lipopolysaccharide gene gene90 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00455 XM56_00460 XM56_00460 XM56_00460 119335 119760 - organic hydroperoxide resistance protein gene gene91 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00460 XM56_00465 XM56_00465 XM56_00465 120231 121280 - transposase gene gene92 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00465 XM56_00470 XM56_00470 XM56_00470 122062 123669 + peptide ABC transporter substrate-binding protein DppABCDF is involved in the transport of dipeptides%3B also binds heme and mediates chemotaxis to dipeptides gene gene93 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00470 XM56_00475 XM56_00475 XM56_00475 123952 124971 + peptide transporter gene gene94 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00475 XM56_00480 XM56_00480 XM56_00480 124982 125884 + peptide transporter gene gene95 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00480 XM56_00485 XM56_00485 dppD dppD 125900 126880 + peptide ABC transporter ATP-binding protein DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF gene gene96 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00485 XM56_00490 XM56_00490 dppF dppF 126895 127899 + peptide ABC transporter ATP-binding protein Part of the ABC transporter complex DppABCDF involved in the transport of dipeptides gene gene97 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00490 XM56_00495 XM56_00495 XM56_00495 128235 129887 - membrane protein gene gene98 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00495 XM56_00500 XM56_00500 XM56_00500 129890 130078 - membrane protein gene gene99 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00500 XM56_00505 XM56_00505 XM56_00505 130075 131634 - cellulose biosynthesis protein BcsE gene gene100 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00505 XM56_00510 XM56_00510 XM56_00510 131832 132023 + hypothetical protein gene gene101 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00510 XM56_00515 XM56_00515 XM56_00515 132027 132764 + cell division protein gene gene102 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00515 XM56_00520 XM56_00520 bcsA bcsA 132761 135388 + cellulose synthase polymerizes uridine 5'-diphosphate glucose to cellulose%3B acts with BcsB%2C BcsZ and BcsC in cellulose biosynthesis gene gene103 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00520 XM56_00525 XM56_00525 XM56_00525 135399 137702 + cellulose synthase binds the cellulose synthase activator%2C bis-(3'-5') cyclic diguanylic acid (c-di-GMP) gene gene104 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00525 XM56_00530 XM56_00530 XM56_00530 137708 138835 + endo-1%2C4-D-glucanase catalyzes the hydrolysis of 1%2C4-beta-D-glucosidic linkages in cellulose%2C lichenin and cereal beta-D-glucans gene gene105 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00530 XM56_00535 XM56_00535 cellulose synthase cellulose synthase 138817 142322 + disrupted pseudogene gene106 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00535 XM56_00540 XM56_00540 XM56_00540 142323 142520 - hypothetical protein gene gene107 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00540 XM56_00545 XM56_00545 XM56_00545 142586 144082 + histidine kinase gene gene108 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00545 XM56_00550 XM56_00550 XM56_00550 144807 145511 + porin gene gene109 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00550 XM56_00555 XM56_00555 XM56_00555 145588 147306 + pectate lyase gene gene110 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00555 XM56_00560 XM56_00560 XM56_00560 147431 147910 + hypothetical protein gene gene111 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00560 XM56_00565 XM56_00565 XM56_00565 148288 149580 + C4-dicarboxylate transporter involved in the transport of C4-dicarboxylates across the membrane gene gene112 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00565 XM56_00570 XM56_00570 XM56_00570 149995 151485 + peptidase gene gene113 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00570 XM56_00575 XM56_00575 XM56_00575 151645 152589 - ketodeoxygluconokinase catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate-6-phosphate from 2-dehydro-3-deoxy-D-gluconate gene gene114 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00575 XM56_00580 XM56_00580 XM56_00580 152734 152934 - tautomerase gene gene115 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00580 XM56_00585 XM56_00585 XM56_00585 153173 153964 + c-di-GMP phosphodiesterase in Escherichia coli this protein is involved in flagellar function gene gene116 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00585 XM56_00590 XM56_00590 XM56_00590 154083 156224 + hypothetical protein gene gene117 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00590 XM56_00595 XM56_00595 XM56_00595 156229 156993 - CDP-diacylglycerol pyrophosphatase gene gene118 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00595 XM56_00600 XM56_00600 XM56_00600 157017 158006 - membrane protein gene gene119 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00600 XM56_00605 XM56_00605 XM56_00605 158423 161665 + autotransporter gene gene120 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00605 XM56_00610 XM56_00610 XM56_00610 162024 163376 - glutathione reductase catalyzes the reduction of 2 glutathione to glutathione disulfide%3B maintains high levels of reduced glutathione in the cytosol%3B involved in redox regulation and oxidative defense gene gene121 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00610 XM56_00615 XM56_00615 XM56_00615 163620 164462 - ribosomal RNA large subunit methyltransferase J gene gene122 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00615 XM56_00620 XM56_00620 XM56_00620 164799 166841 + oligopeptidase A gene gene123 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00620 XM56_00625 XM56_00625 XM56_00625 166845 167603 + methyltransferase predicted SAM-dependent methyltransferase gene gene124 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00625 XM56_00630 XM56_00630 XM56_00630 167794 168813 - peptidase M10 gene gene125 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00630 XM56_00635 XM56_00635 XM56_00635 169258 170601 - glutamate dehydrogenase converts 2-oxoglutarate to glutamate%3B in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction%3B uses NADPH%3B forms a homohexamer gene gene126 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00635 XM56_00640 XM56_00640 XM56_00640 170865 171311 - universal stress global response regulator UspA involved in resistance to DNA-damaging agents gene gene127 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00640 XM56_00645 XM56_00645 XM56_00645 172188 172523 + universal stress protein UspB ppGpp-dependent%2C membrane associated%2C stress protein produced under conditions of nutrient deprivation%2C osmotic shock and oxidative stress gene gene128 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00645 XM56_00650 XM56_00650 XM56_00650 172630 174126 - phosphate transporter PitA involved in the transport of inorganic phosphate gene gene129 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00650 XM56_00655 XM56_00655 XM56_00655 174438 175637 + membrane protein gene gene130 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00655 XM56_00660 XM56_00660 XM56_00660 175724 177049 - C4-dicarboxylate ABC transporter gene gene131 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00660 XM56_00665 XM56_00665 XM56_00665 177211 177528 - acyl-CoA synthetase gene gene132 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00665 XM56_00670 XM56_00670 XM56_00670 177525 178898 - 3-methylaspartate ammonia-lyase gene gene133 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00670 XM56_00675 XM56_00675 XM56_00675 178900 180144 - methylaspartate ammonia-lyase gene gene134 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00675 XM56_00680 XM56_00680 XM56_00680 180144 181589 - glutamate mutase methylaspartate mutase subunit E%3B catalyzes the formation of threo-beta-methyl-L-aspartate from L-glutamate gene gene135 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00680 XM56_00685 XM56_00685 XM56_00685 181604 182995 - glutamate mutase gene gene136 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00685 XM56_00690 XM56_00690 XM56_00690 182992 183438 - methylaspartate mutase gene gene137 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00690 XM56_00695 XM56_00695 XM56_00695 183894 184754 - GHMP kinase gene gene138 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00695 XM56_00700 XM56_00700 XM56_00700 184797 185579 - uroporphyrin-III methyltransferase catalyzes 2 sequential methylations%2C the formation of precorrin-1 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and uroporphyrin III%2C and the formation of precorrin-2 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and precorrin-1 gene gene139 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00700 XM56_00705 XM56_00705 XM56_00705 186021 186941 + LysR family transcriptional regulator gene gene140 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00705 XM56_00710 XM56_00710 XM56_00710 187210 188856 + fumarate hydratase catalyzes the formation of malate from fumerate gene gene141 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00710 XM56_00715 XM56_00715 XM56_00715 188878 189468 + cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase catalyzes the formation of adenosylcobalamide from cobinamide and the formation of coenzyme B12 from cob(I)alamin gene gene142 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00715 XM56_00720 XM56_00720 XM56_00720 189714 190511 - hydrolase gene gene143 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00720 XM56_00725 XM56_00725 XM56_00725 191049 191738 + hypothetical protein gene gene144 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00725 XM56_00730 XM56_00730 XM56_00730 191833 192792 - LysR family transcriptional regulator gene gene145 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00730 XM56_00735 XM56_00735 XM56_00735 192888 194102 + MFS transporter gene gene146 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00735 XM56_00740 XM56_00740 XM56_00740 194647 196152 + methylmalonate-semialdehyde dehydrogenase gene gene147 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00740 XM56_00745 XM56_00745 XM56_00745 196208 197032 + 5-deoxyglucuronate isomerase gene gene148 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00745 XM56_00750 XM56_00750 XM56_00750 197127 197960 - Fe-S cluster assembly protein HesB gene gene149 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00750 XM56_00755 XM56_00755 XM56_00755 198245 200164 - 5-dehydro-2-deoxygluconokinase gene gene150 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00755 XM56_00760 XM56_00760 XM56_00760 200635 202575 + 3D-(3%2C5/4)-trihydroxycyclohexane-1%2C2-dione hydrolase gene gene151 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00760 XM56_00765 XM56_00765 XM56_00765 202655 203668 + inositol 2-dehydrogenase gene gene152 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00765 XM56_00770 XM56_00770 XM56_00770 203802 204698 + inosose dehydratase gene gene153 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00770 XM56_00775 XM56_00775 XM56_00775 204766 205266 - GCN5 family acetyltransferase gene gene154 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00775 XM56_00780 XM56_00780 XM56_00780 205653 206348 + quercetin 2%2C3-dioxygenase gene gene155 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00780 XM56_00785 XM56_00785 XM56_00785 206603 207598 + transcriptional regulator gene gene156 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00785 XM56_00790 XM56_00790 XM56_00790 207623 208939 - gluconate transporter gene gene157 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00790 XM56_00795 XM56_00795 idnK idnK 209161 209673 + gluconate kinase gene gene158 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00795 XM56_00800 XM56_00800 XM56_00800 209790 210383 - antibiotic transporter gene gene159 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00800 XM56_00805 XM56_00805 XM56_00805 210610 211713 + aspartate-semialdehyde dehydrogenase catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde gene gene160 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00805 XM56_00810 XM56_00810 XM56_00810 211813 213492 - acetolactate synthase catalyzes the formation of 2-acetolactate from pyruvate in stationary phase gene gene161 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00810 XM56_00815 XM56_00815 XM56_00815 213532 214317 - alpha-acetolactate decarboxylase gene gene162 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00815 XM56_00820 XM56_00820 XM56_00820 214425 215321 + transcriptional regulator gene gene163 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00820 XM56_00825 XM56_00825 XM56_00825 215318 217015 - histidine kinase gene gene164 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00825 XM56_00830 XM56_00830 XM56_00830 217511 219694 + glycogen branching protein gene gene165 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00830 XM56_00835 XM56_00835 XM56_00835 219696 221684 + glycogen debranching protein catalyzes the hydrolysis of the alpha-1%2C6-glucosidic linkages in partially depolymerized glycogen gene gene166 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00835 XM56_00840 XM56_00840 glgC glgC 221694 222980 + glucose-1-phosphate adenylyltransferase catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate gene gene167 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00840 XM56_00845 XM56_00845 glgA glgA 223164 224594 + glycogen synthase catalyzes the formation of alpha-1%2C4-glucan chains from ADP-glucose gene gene168 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00845 XM56_00850 XM56_00850 XM56_00850 224641 227088 + maltodextrin phosphorylase gene gene169 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00850 XM56_00855 XM56_00855 glpD glpD 227312 228826 - glycerol-3-phosphate dehydrogenase in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions%3B anaerobic expression is repressed by the arcAB system%3B converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8%3B associates with the cytoplasmic membrane gene gene170 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00855 XM56_00860 XM56_00860 XM56_00860 228986 229309 + hypothetical protein gene gene171 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00860 XM56_00865 XM56_00865 XM56_00865 229665 230423 - transcriptional regulator represses the glpD%2C glpFK%2C glpTQ%2C and glpACB operons involved in glycerol-3-phosphate metabolism gene gene172 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00865 XM56_00870 XM56_00870 XM56_00870 230459 231295 - intramembrane serine protease GlpG protease responsible for the cleavage between Ser and Asp residues of proteins in regions of high local hydrophilicity gene gene173 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00870 XM56_00875 XM56_00875 glpE glpE 231365 231691 - thiosulfate sulfurtransferase belongs to rhodanese family%3B thiosulfate thiotransferase%3B in Escherichia coli this enzyme catalyzes the formation of thiocyanate from thiosulfate and cyanide with low efficiency%3B contains an active site cysteine gene gene174 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00875 XM56_00880 XM56_00880 XM56_00880 231889 233211 + NADH dehydrogenase gene gene175 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00880 XM56_00885 XM56_00885 XM56_00885 233239 235950 - transcriptional regulator MalT Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides gene gene176 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00885 XM56_00890 XM56_00890 XM56_00890 236269 238674 + maltose phosphorylase gene gene177 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00890 XM56_00895 XM56_00895 malQ malQ 238687 240783 + 4-alpha-glucanotransferase amylomaltase%3B acts to release glucose from maltodextrins gene gene178 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00895 XM56_00900 XM56_00900 XM56_00900 241202 242251 - transposase gene gene179 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00900 XM56_00905 XM56_00905 XM56_00905 242543 243118 - Fe/S biogenesis protein NfuA cytoplasmic protein that may be involved in the utilization of double-stranded DNA as a carbon source gene gene180 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00905 XM56_00910 XM56_00910 XM56_00910 243178 243861 - competence protein ComF gene gene181 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00910 XM56_00915 XM56_00915 XM56_00915 244099 244875 + carboxylesterase Shows carboxylesterase activity with a preference for short chain fatty acid esters%3B involved in pimeloyl-CoA synthesis gene gene182 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00915 XM56_00920 XM56_00920 XM56_00920 244990 245253 + hypothetical protein gene gene183 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00920 XM56_00925 XM56_00925 XM56_00925 245617 245865 - ferrous iron transporter C regulatory protein that controls transcription of feoABC genes gene gene184 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00925 XM56_00930 XM56_00930 feoB feoB 245879 248194 - ferrous iron transporter B cytoplasmic membrane ferrous uptake system permease%3B mutations disrupt the ability of Escherichia coli to take up ferrous iron%3B GTP-binding protein which requires GTP for efficient iron(II) uptake gene gene185 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00930 XM56_00935 XM56_00935 XM56_00935 248413 248637 - iron transporter gene gene186 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00935 XM56_00940 XM56_00940 XM56_00940 249272 251656 - transcription accessory protein gene gene187 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00940 XM56_00945 XM56_00945 XM56_00945 251696 252859 - MFS transporter gene gene188 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00945 XM56_00950 XM56_00950 XM56_00950 252898 253878 - hypothetical protein gene gene189 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00950 XM56_00955 XM56_00955 XM56_00955 253923 254753 - hypothetical protein gene gene190 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00955 XM56_00960 XM56_00960 XM56_00960 254778 255788 - hypothetical protein gene gene191 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00960 XM56_00965 XM56_00965 XM56_00965 256218 256715 + transcription elongation factor GreB gene gene192 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00965 XM56_00970 XM56_00970 ompR ompR 256836 257555 + osmolarity response regulator part of two-component system EnvZ/OmpR%3B regulates transcription of outer membrane porin genes ompC/F%3B under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR%3B the result is increased expression of ompC and repression of ompF%3B also functions in regulation of other genes%3B forms dimers upon phosphorylation gene gene193 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00970 XM56_00975 XM56_00975 envZ envZ 257552 258904 + osmolarity sensor protein membrane-localized osmosensor%3B histidine kinase%3B in high osmolarity EnvZ autophosphorylates itself and transfers phosphoryl group to OmpR gene gene194 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00975 XM56_00980 XM56_00980 XM56_00980 259422 260471 - transposase gene gene195 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00980 XM56_00985 XM56_00985 XM56_00985 261110 262729 - phosphoenolpyruvate carboxykinase PEP carboxykinase%3B PEP carboxylase%3B PEPCK%3B catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP gene gene196 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00985 XM56_00990 XM56_00990 hslO hslO 262929 263843 - Hsp33-like chaperonin becomes active under oxidative stress%3B four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive%3B oxidative stress results in oxidized cysteines%2C release of zinc%2C and binding of Hsp33 to aggregation-prone proteins%3B forms dimers and higher order oligomers gene gene197 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00990 XM56_00995 XM56_00995 XM56_00995 263873 264280 - ribosome-associated heat shock protein Hsp15 gene gene198 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_00995 XM56_01000 XM56_01000 XM56_01000 264317 264994 - nucleotidase gene gene199 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01000 XM56_01005 XM56_01005 XM56_01005 265052 267199 - Intracellular growth attenuator protein igaA gene gene200 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01005 XM56_01010 XM56_01010 nudE nudE 267755 268312 + adenosine nucleotide hydrolase ADP-sugar pyrophosphatase%3B catalyzes the formation of D-ribose 5-phosphate from ADP-ribose%3B can also act on ADP-mannose and ADP-glucose gene gene201 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01010 XM56_01015 XM56_01015 mrcA mrcA 268382 270937 - penicillin-binding protein 1A bifunctional murein transglycosylase/murein transpeptidase%3B penicillin-binding protein 1A%3B involved in the synthesis of cross-linked peptidoglycan from the lipid intermediates in cell wall formation%3B penicillin-insensitive transglycosylase catalyzes the formation of linear glycan strands and the penicillin-sensitive transpeptidase catalyzes the cross-linking of the peptide subunits gene gene202 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01015 XM56_01020 XM56_01020 XM56_01020 271057 271929 + pilus assembly protein HofM gene gene203 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01020 XM56_01025 XM56_01025 XM56_01025 271929 272477 + pilus assembly protein PilN gene gene204 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01025 XM56_01030 XM56_01030 XM56_01030 272470 273045 + pilus assembly protein PilO gene gene205 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01030 XM56_01035 XM56_01035 XM56_01035 273056 273406 + pilus assembly protein PilP gene gene206 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01035 XM56_01040 XM56_01040 hofQ hofQ 273442 274761 + porin outer membrane porin probably involved in uptake of extracellular double-stranded DNA%3B similar to outer membrane competence protein ComE from Haemophilus influenzae and outer membrane protein PilQ involved in type IV pilus production from Pseudomonas aeruginosa gene gene207 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01040 XM56_01045 XM56_01045 aroK aroK 275109 275630 + shikimate kinase type I enzyme similar to type II but differentially regulated%3B major shikimate kinase in fully repressed cells%3B catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis gene gene208 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01045 XM56_01050 XM56_01050 aroB aroB 275687 276775 + 3-dehydroquinate synthase catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate%3B functions in aromatic amino acid biosynthesis gene gene209 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01050 XM56_01055 XM56_01055 XM56_01055 276917 277915 + hypothetical protein gene gene210 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01055 XM56_01060 XM56_01060 XM56_01060 277999 278811 + DNA adenine methylase gene gene211 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01060 XM56_01065 XM56_01065 XM56_01065 278916 279593 + ribulose-phosphate 3-epimerase gene gene212 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01065 XM56_01070 XM56_01070 XM56_01070 279586 280284 + phosphoglycolate phosphatase catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate gene gene213 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01070 XM56_01075 XM56_01075 XM56_01075 280286 281326 + tryptophanyl-tRNA synthetase gene gene214 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01075 XM56_01080 XM56_01080 cysG cysG 281382 282794 - siroheme synthase multifunction enzyme consisting of uroporphyrin-III C-methyltransferase%2C precorrin-2 dehydrogenase and sirohydrochlorin ferrochelatase%3B catalyzes the methylation of uroporphyrinogen III to form precorrin-2%2C then catalyzes formation of sirohydrochlorin from precorrin-2 and finally catalyzed the formation of siroheme from sirohydrochlorin gene gene215 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01080 XM56_01085 XM56_01085 XM56_01085 282964 283770 - nitrite transporter NirC member of the FNT family of formate and nitrite transporters gene gene216 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01085 XM56_01090 XM56_01090 nirD nirD 283862 284188 - nitrite reductase involved in reducing nitrite to ammonium to detoxify nitrite accumulation in anaerobic nitrate-respiring cells and regenerate NAD+%3B bounds to NirB%2C the cytoplasmic subunit%2C whose expression is induced at high nitrate concentrations gene gene217 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01090 XM56_01095 XM56_01095 XM56_01095 284185 286731 - nitrite reductase gene gene218 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01095 XM56_01100 XM56_01100 XM56_01100 287012 288307 + cytosine deaminase Catalyzes the deamination of cytosine to uracil and ammonia gene gene219 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01100 XM56_01105 XM56_01105 XM56_01105 288357 289541 - transporter gene gene220 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01105 XM56_01110 XM56_01110 XM56_01110 289854 290834 - LacI family transcriptional regulator gene gene221 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01110 XM56_01115 XM56_01115 XM56_01115 290916 292229 - diacetylchitobiose-6-phosphate hydrolase catalyzes the fromation of N-acetyl-D-glucosamine and N-acetyl-D-glucosamine-6-phosphate from diacetylchitobiose-6-phosphate gene gene222 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01115 XM56_01120 XM56_01120 XM56_01120 292582 293151 + peptidylprolyl isomerase gene gene223 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01120 XM56_01125 XM56_01125 XM56_01125 293285 294796 + ATP-binding protein gene gene224 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01125 XM56_01130 XM56_01130 XM56_01130 294817 295392 + anthranilate synthase component II TrpG%3B with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine%3B TrpG provides the glutamine amidotransferase activity gene gene225 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01130 XM56_01135 XM56_01135 argD argD 295640 296857 + acetylornithine aminotransferase DapATase%3B bifunctional enzyme that functions in arginine and lysine biosynthetic pathways%3B catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2%2C6-diaminoheptanedioate gene gene226 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01135 XM56_01140 XM56_01140 XM56_01140 297040 299160 - membrane protein gene gene227 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01140 XM56_01145 XM56_01145 XM56_01145 299438 300070 - Crp/Fnr family transcriptional regulator cAMP receptor protein%3B complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons gene gene228 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01145 XM56_01150 XM56_01150 XM56_01150 300405 300812 + hypothetical protein gene gene229 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01150 XM56_01155 XM56_01155 XM56_01155 300955 301824 - phosphoribulokinase gene gene230 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01155 XM56_01160 XM56_01160 XM56_01160 301966 302202 - hypothetical protein gene gene231 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01160 XM56_01165 XM56_01165 XM56_01165 302199 303179 - hydrolase gene gene232 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01165 XM56_01170 XM56_01170 XM56_01170 303281 303883 + alcohol dehydrogenase gene gene233 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01170 XM56_01175 XM56_01175 XM56_01175 303904 304686 + PhzF family phenazine biosynthesis protein gene gene234 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01175 XM56_01180 XM56_01180 tauA tauA 304873 305901 + taurine ABC transporter substrate-binding protein with TauB and TauC is responsible for taurine uptake. gene gene235 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01180 XM56_01185 XM56_01185 tauB tauB 305910 306677 + taurine transporter ATP-binding subunit Part of the ABC transporter complex tauABC involved in taurine import gene gene236 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01185 XM56_01190 XM56_01190 XM56_01190 306674 307564 + taurine transporter subunit gene gene237 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01190 XM56_01195 XM56_01195 tauD tauD 307561 308409 + taurine dioxygenase catalyzes the conversion of taurine (2-aminoethanesulfonate) to sulfite and aminoacetaldehyde concurrently with the conversion of alpha-ketoglutarate to succinate and carbon dioxide%3B non-heme iron oxidase%3B allows the use of taurine as an alternative sulfur source%3B forms homodimers gene gene238 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01195 XM56_01200 XM56_01200 XM56_01200 308444 309415 - glycosyl transferase gene gene239 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01200 XM56_01205 XM56_01205 XM56_01205 309507 310496 - glycosyl transferase gene gene240 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01205 XM56_01210 XM56_01210 XM56_01210 310538 312454 - ABC transporter ATP-binding protein gene gene241 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01210 XM56_01215 XM56_01215 XM56_01215 312815 313366 + potassium transporter KefG required for KefB activity gene gene242 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01215 XM56_01220 XM56_01220 XM56_01220 313369 315177 + potassium transporter KefB involved in potassium efflux gene gene243 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01220 XM56_01225 XM56_01225 XM56_01225 315192 315413 + hypothetical protein gene gene244 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01225 XM56_01230 XM56_01230 XM56_01230 315508 316092 + peptidylprolyl isomerase rotamase gene gene245 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01230 XM56_01235 XM56_01235 XM56_01235 316158 316376 - lysis protein phi X174 lysis protein%3B required for phi X174 lysis gene gene246 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01235 XM56_01240 XM56_01240 XM56_01240 316661 317485 + peptidylprolyl isomerase rotamase gene gene247 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01240 XM56_01245 XM56_01245 XM56_01245 317751 318473 + hypothetical protein gene gene248 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01245 XM56_01250 XM56_01250 XM56_01250 318473 318883 + sulfur transfer complex subunit TusD in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs gene gene249 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01250 XM56_01255 XM56_01255 XM56_01255 318889 319248 + protein TusC gene gene250 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01255 XM56_01260 XM56_01260 XM56_01260 319268 319555 + sulfur relay protein TusB gene gene251 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01260 XM56_01265 XM56_01265 XM56_01265 319693 320067 + 30S ribosomal protein S12 gene gene252 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01265 XM56_01270 XM56_01270 XM56_01270 320164 320634 + 30S ribosomal protein S7 gene gene253 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01270 XM56_01275 XM56_01275 fusA fusA 320728 322836 + elongation factor G EF-G%3B promotes GTP-dependent translocation of the ribosome during translation%3B many organisms have multiple copies of this gene gene gene254 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01275 XM56_01280 XM56_01280 tuf tuf 322908 324092 + elongation factor Tu EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu gene gene255 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01280 XM56_01285 XM56_01285 XM56_01285 324235 324429 + bacterioferritin gene gene256 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01285 XM56_01290 XM56_01290 XM56_01290 324509 324982 + bacterioferritin iron storage protein gene gene257 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01290 XM56_01295 XM56_01295 rpsJ rpsJ 325363 325674 + 30S ribosomal protein S10 NusE%3B involved in assembly of the 30S subunit%3B in the ribosome%2C this protein is involved in the binding of tRNA%3B in Escherichia coli this protein was also found to be involved in transcription antitermination%3B NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination%3B binding of NusB/S10 to boxA nucleates assembly of the antitermination complex gene gene258 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01295 XM56_01300 XM56_01300 XM56_01300 325707 326336 + 50S ribosomal protein L3 gene gene259 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01300 XM56_01305 XM56_01305 rplD rplD 326347 326952 + 50S ribosomal protein L4 L4 is important during the early stages of 50S assembly%3B it initially binds near the 5' end of the 23S rRNA gene gene260 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01305 XM56_01310 XM56_01310 rplW rplW 326949 327251 + 50S ribosomal protein L23 binds third domain of 23S rRNA and protein L29%3B part of exit tunnel gene gene261 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01310 XM56_01315 XM56_01315 XM56_01315 327268 328092 + 50S ribosomal protein L2 gene gene262 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01315 XM56_01320 XM56_01320 XM56_01320 328107 328385 + 30S ribosomal protein S19 gene gene263 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01320 XM56_01325 XM56_01325 XM56_01325 328400 328732 + 50S ribosomal protein L22 gene gene264 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01325 XM56_01330 XM56_01330 XM56_01330 328750 329448 + 30S ribosomal protein S3 gene gene265 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01330 XM56_01335 XM56_01335 XM56_01335 329461 329871 + 50S ribosomal protein L16 gene gene266 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01335 XM56_01340 XM56_01340 XM56_01340 329871 330062 + 50S ribosomal protein L29 one of the stabilizing components for the large ribosomal subunit gene gene267 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01340 XM56_01345 XM56_01345 XM56_01345 330062 330316 + 30S ribosomal protein S17 gene gene268 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01345 XM56_01350 XM56_01350 XM56_01350 330482 330853 + 50S ribosomal protein L14 gene gene269 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01350 XM56_01355 XM56_01355 rplX rplX 330864 331178 + 50S ribosomal protein L24 assembly initiator protein%3B binds to 5' end of 23S rRNA and nucleates assembly of the 50S%3B surrounds polypeptide exit tunnel gene gene270 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01355 XM56_01360 XM56_01360 XM56_01360 331193 331732 + 50S ribosomal protein L5 gene gene271 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01360 XM56_01365 XM56_01365 rpsN rpsN 331746 332051 + 30S ribosomal protein S14 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit%3B similar to what is observed with proteins L31 and L33%2C some proteins in this family contain CXXC motifs that are involved in zinc binding%3B if two copies are present in a genome%2C then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc%3B the proteins in this group do not appear to have the zinc-binding motif gene gene272 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01365 XM56_01370 XM56_01370 XM56_01370 332085 332477 + 30S ribosomal protein S8 gene gene273 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01370 XM56_01375 XM56_01375 XM56_01375 332492 333025 + 50S ribosomal protein L6 gene gene274 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01375 XM56_01380 XM56_01380 XM56_01380 333035 333388 + 50S ribosomal protein L18 gene gene275 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01380 XM56_01385 XM56_01385 XM56_01385 333403 333906 + 30S ribosomal protein S5 gene gene276 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01385 XM56_01390 XM56_01390 rpmD rpmD 333909 334088 + 50S ribosomal protein L30 L30 binds domain II of the 23S rRNA and the 5S rRNA%3B similar to eukaryotic protein L7 gene gene277 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01390 XM56_01395 XM56_01395 XM56_01395 334092 334526 + 50S ribosomal protein L15 gene gene278 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01395 XM56_01400 XM56_01400 secY secY 334534 335865 + preprotein translocase subunit SecY forms heterotrimeric complex in the membrane%3B in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG%3B the SecG subunit is not essential%3B in bacteria translocation is driven via the SecA ATPase gene gene279 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01400 XM56_01405 XM56_01405 XM56_01405 335900 336016 + 50S ribosomal protein L36 gene gene280 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01405 XM56_01410 XM56_01410 XM56_01410 336164 336520 + 30S ribosomal protein S13 gene gene281 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01410 XM56_01415 XM56_01415 XM56_01415 336537 336926 + 30S ribosomal protein S11 gene gene282 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01415 XM56_01420 XM56_01420 XM56_01420 336957 337577 + 30S ribosomal protein S4 gene gene283 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01420 XM56_01425 XM56_01425 XM56_01425 337603 338595 + DNA-directed RNA polymerase subunit alpha catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme gene gene284 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01425 XM56_01430 XM56_01430 rplQ rplQ 338636 339025 + 50S ribosomal protein L17 is a component of the macrolide binding site in the peptidyl transferase center gene gene285 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01430 XM56_01435 XM56_01435 XM56_01435 339195 339566 + hypothetical protein gene gene286 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01435 XM56_01440 XM56_01440 zntR zntR 339570 339995 + zinc-responsive transcriptional regulator mediates expression of the zinc export protein ZntA in response to high levels of zinc%3B member of MerR family of transcriptional regulators gene gene287 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01440 XM56_01445 XM56_01445 XM56_01445 340085 340291 + hypothetical protein gene gene288 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01445 XM56_01450 XM56_01450 XM56_01450 340407 341843 - transposase gene gene289 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01450 XM56_01455 XM56_01455 mscL mscL 341931 342341 - large-conductance mechanosensitive channel forms homopentamer%3B channel that opens in response to pressure or hypoosmotic shock gene gene290 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01455 XM56_01460 XM56_01460 trkA trkA 342460 343836 - potassium transporter peripheral membrane component involved in potassium uptake%3B found to be peripherally associated with the inner membrane in Escherichia coli%3B contains an NAD-binding domain gene gene291 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01460 XM56_01465 XM56_01465 XM56_01465 343888 345177 - 16S rRNA methyltransferase catalyzes the methylation of cytosine at position 967 (m5C967) of 16S rRNA%3B SAM-dependent methyltransferase gene gene292 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01465 XM56_01470 XM56_01470 fmt fmt 345539 346486 - methionyl-tRNA formyltransferase modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation%3B inactivation of this gene in Escherichia coli severely impairs growth gene gene293 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01470 XM56_01475 XM56_01475 XM56_01475 346511 347023 - peptide deformylase gene gene294 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01475 XM56_01480 XM56_01480 XM56_01480 347158 348279 + DNA processing protein DprA gene gene295 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01480 XM56_01485 XM56_01485 XM56_01485 348251 348724 + hypothetical protein gene gene296 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01485 XM56_01490 XM56_01490 XM56_01490 348772 349308 + hypothetical protein gene gene297 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01490 XM56_01495 XM56_01495 XM56_01495 349316 349888 + tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein involved in the biosynthesis of the threonylcarbamoyladenosine (t6A) residue at position 37 of ANN-decoding tRNAs gene gene298 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01495 XM56_01500 XM56_01500 XM56_01500 349897 350718 + shikimate dehydrogenase gene gene299 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01500 XM56_01505 XM56_01505 XM56_01505 350778 351320 - hypothetical protein gene gene300 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01505 XM56_01510 XM56_01510 XM56_01510 351862 353410 + 16S ribosomal RNA rRNA gene301 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01510 XM56_01515 XM56_01515 XM56_01515 353510 353586 + tRNA-Ile tRNA gene302 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01515 XM56_01520 XM56_01520 XM56_01520 353697 353772 + tRNA-Ala tRNA gene303 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01520 XM56_01525 XM56_01525 XM56_01525 354110 357145 + 23S ribosomal RNA rRNA gene304 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01525 XM56_01530 XM56_01530 XM56_01530 357316 357431 + 5S ribosomal RNA rRNA gene305 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01530 XM56_01535 XM56_01535 XM56_01535 357639 357830 + transposase gene gene306 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01535 XM56_01540 XM56_01540 XM56_01540 357788 358003 + transposase gene gene307 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01540 XM56_01545 XM56_01545 XM56_01545 358337 359266 + homoserine O-succinyltransferase catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis gene gene308 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01545 XM56_01550 XM56_01550 XM56_01550 359672 361270 + malate synthase Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle gene gene309 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01550 XM56_01555 XM56_01555 XM56_01555 361443 362750 + isocitrate lyase gene gene310 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01555 XM56_01560 XM56_01560 aceK aceK 362827 364554 + isocitrate dehydrogenase catalyzes the phosphorylation/dephosphorylation of the enzyme isocitrate dehydrogenase on a specific serine which regulates activity%3B unphosphorylated IDH is fully active when cells are grown on glucose while the enzyme becomes phosphorylated and inactive in the presence of acetate or ethanol gene gene311 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01560 XM56_01565 XM56_01565 XM56_01565 364848 365687 - transcriptional repressor IclR regulates the glyoxylate bypass operon (aceBAK)%2C which encodes isocitrate lyase%2C malate synthase and isocitrate dehydrogenase kinase/phosphorylase gene gene312 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01565 XM56_01570 XM56_01570 metH metH 365892 369587 + B12-dependent methionine synthase one of two methionine synthases in Escherichia coli%3B MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine%3B requires zinc for activity gene gene313 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01570 XM56_01575 XM56_01575 XM56_01575 369674 374533 - hemolysin gene gene314 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01575 XM56_01580 XM56_01580 XM56_01580 374605 376272 - hemolysin activation protein gene gene315 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01580 XM56_01585 XM56_01585 XM56_01585 376588 377511 - bile acid:sodium symporter gene gene316 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01585 XM56_01590 XM56_01590 XM56_01590 377636 379051 - aspartate kinase catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP%3B functions in amino acid biosynthesis%3B lysine sensitive gene gene317 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01590 XM56_01595 XM56_01595 pgi pgi 379364 381010 + glucose-6-phosphate isomerase functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis%3B catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate%3B member of PGI family gene gene318 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01595 XM56_01600 XM56_01600 XM56_01600 381113 381520 + phosphate-starvation-inducible protein PsiE gene gene319 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01600 XM56_01605 XM56_01605 malG malG 382026 382916 - maltose transporter permease with MalKFE is involved in the transport of maltose into the cell gene gene320 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01605 XM56_01610 XM56_01610 malF malF 382930 384507 - maltose transporter membrane protein with MalKGE is involved in maltose transport into the cell gene gene321 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01610 XM56_01615 XM56_01615 malE malE 384863 386074 - sugar ABC transporter substrate-binding protein functions in the MalKFGE ABC transporter complex to transport maltose into the cell by using ATP hydrolysis gene gene322 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01615 XM56_01620 XM56_01620 XM56_01620 386719 387834 + maltose/maltodextrin transporter ATP-binding protein with malEFG is involved in import of maltose/maltodextrin gene gene323 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01620 XM56_01625 XM56_01625 lamB lamB 387906 389204 + maltoporin porin involved in the transport of maltose and maltodextrins gene gene324 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01625 XM56_01630 XM56_01630 XM56_01630 389335 390252 + maltose-binding protein gene gene325 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01630 XM56_01635 XM56_01635 XM56_01635 390563 393313 + hypothetical protein gene gene326 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01635 XM56_01640 XM56_01640 XM56_01640 393447 393953 + chorismate--pyruvate lyase gene gene327 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01640 XM56_01645 XM56_01645 ubiA ubiA 393978 394844 + 4-hydroxybenzoate polyprenyltransferase catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate%2C as part of the ubiquinone biosynthesis pathway gene gene328 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01645 XM56_01650 XM56_01650 XM56_01650 394902 397370 - glycerol-3-phosphate acyltransferase PlsB%3B catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA gene gene329 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01650 XM56_01655 XM56_01655 XM56_01655 397496 397864 + diacylglycerol kinase catalyzes the phosphorylation of diacylglycerol to form diacylglycerol phosphate gene gene330 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01655 XM56_01660 XM56_01660 XM56_01660 397992 398600 + LexA repressor Represses a number of genes involved in the response to DNA damage gene gene331 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01660 XM56_01665 XM56_01665 XM56_01665 398909 399118 + hypothetical protein gene gene332 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01665 XM56_01670 XM56_01670 XM56_01670 399390 399899 - zinc uptake transcriptional repressor Acts as a negative controlling element%2C employing Zn(2+) as a cofactor to bind the operator of the repressed genes znuACB gene gene333 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01670 XM56_01675 XM56_01675 XM56_01675 400223 402232 + acyltransferase gene gene334 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01675 XM56_01680 XM56_01680 XM56_01680 402408 403454 + tRNA-dihydrouridine synthase A gene gene335 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01680 XM56_01685 XM56_01685 XM56_01685 403661 403879 + phage-shock protein gene gene336 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01685 XM56_01690 XM56_01690 XM56_01690 404220 404546 - hypothetical protein gene gene337 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01690 XM56_01695 XM56_01695 XM56_01695 404745 405728 - quinone oxidoreductase gene gene338 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01695 XM56_01700 XM56_01700 XM56_01700 405918 407324 + DNA helicase unwinds double stranded DNA gene gene339 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01700 XM56_01705 XM56_01705 alr alr 407354 408433 + alanine racemase converts L-alanine to D-alanine which is used in cell wall biosynthesis%3B binds one pyridoxal phosphate per monomer%3B forms a homodimer gene gene340 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01705 XM56_01710 XM56_01710 XM56_01710 408491 409684 + aromatic amino acid aminotransferase catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate gene gene341 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01710 XM56_01715 XM56_01715 XM56_01715 409856 410905 + transposase gene gene342 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01715 XM56_01720 XM56_01720 XM56_01720 411562 411915 + hypothetical protein gene gene343 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01720 XM56_01725 XM56_01725 XM56_01725 411974 414805 - excinuclease ABC subunit A gene gene344 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01725 XM56_01730 XM56_01730 XM56_01730 415334 415882 + single-stranded DNA-binding protein binds to single stranded DNA and PriA helcase facilitate replication restart gene gene345 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01730 XM56_01735 XM56_01735 XM56_01735 416041 417288 + integrase gene gene346 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01735 XM56_01740 XM56_01740 XM56_01740 417275 418837 + recombinase gene gene347 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01740 XM56_01745 XM56_01745 XM56_01745 418830 420863 + integrase gene gene348 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01745 XM56_01750 XM56_01750 XM56_01750 420856 421275 + hypothetical protein gene gene349 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01750 XM56_01755 XM56_01755 XM56_01755 421350 426113 + ATPase family protein associated with various cellular activities (AAA) gene gene350 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01755 XM56_01760 XM56_01760 XM56_01760 426208 426420 - hypothetical protein gene gene351 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01760 XM56_01765 XM56_01765 XM56_01765 426863 427228 + repressor TnpA represses IS2 gene transcription gene gene352 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01765 XM56_01770 XM56_01770 XM56_01770 427186 428091 + transposase gene gene353 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01770 XM56_01775 XM56_01775 hypothetical protein hypothetical protein 428101 428808 - disrupted pseudogene gene354 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01775 XM56_01780 XM56_01780 XM56_01780 429204 430532 - toxin HipA gene gene355 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01780 XM56_01785 XM56_01785 XM56_01785 430534 430833 - transcriptional regulator gene gene356 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01785 XM56_01790 XM56_01790 XM56_01790 431128 431799 + glutathione S-transferase gene gene357 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01790 XM56_01795 XM56_01795 XM56_01795 432160 433527 + permase gene gene358 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01795 XM56_01800 XM56_01800 XM56_01800 433737 435386 + sodium:proton antiporter gene gene359 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01800 XM56_01805 XM56_01805 XM56_01805 435393 436319 - transcriptional regulator gene gene360 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01805 XM56_01810 XM56_01810 XM56_01810 436448 436873 + LrgA gene gene361 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01810 XM56_01815 XM56_01815 XM56_01815 436866 437555 + LrgB gene gene362 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01815 XM56_01820 XM56_01820 XM56_01820 437777 438538 - ABC transporter ATP-binding protein gene gene363 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01820 XM56_01825 XM56_01825 XM56_01825 438547 439656 - amino acid ABC transporter permease gene gene364 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01825 XM56_01830 XM56_01830 XM56_01830 439666 440844 - amino acid ABC transporter permease gene gene365 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01830 XM56_01835 XM56_01835 XM56_01835 440907 441932 - amino acid ABC transporter substrate-binding protein gene gene366 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01835 XM56_01840 XM56_01840 XM56_01840 442355 443893 + PhoPQ-regulated protein gene gene367 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01840 XM56_01845 XM56_01845 XM56_01845 444137 445057 - lipid A biosynthesis palmitoleoyl acyltransferase Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(palmitoleoyl)-lipid IVA in cells subjected to cold shock gene gene368 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01845 XM56_01850 XM56_01850 XM56_01850 445416 446828 - 2-oxoglutarate translocator gene gene369 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01850 XM56_01855 XM56_01855 XM56_01855 447359 447571 - cold-shock protein gene gene370 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01855 XM56_01860 XM56_01860 XM56_01860 447843 448055 - cold-shock protein gene gene371 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01860 XM56_01865 XM56_01865 XM56_01865 448453 448923 - membrane protein gene gene372 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01865 XM56_01870 XM56_01870 XM56_01870 449166 450725 + diguanylate cyclase gene gene373 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01870 XM56_01875 XM56_01875 fis fis 450797 451093 - Fis family transcriptional regulator Stimulates excision of phage lambda%3B affects Mu development%3B acts as an activator of rRNA and iRNA transcription gene gene374 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01875 XM56_01880 XM56_01880 XM56_01880 451114 452079 - tRNA-dihydrouridine synthase B gene gene375 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01880 XM56_01885 XM56_01885 prmA prmA 452522 453403 - ribosomal protein L11 methyltransferase methylates ribosomal protein L11 at multiple amino acid positions%3B mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype gene gene376 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01885 XM56_01890 XM56_01890 panF panF 453495 454949 - sodium/panthothenate symporter mediates high affinitiy panthothenate transport which is stimulated by the presence of sodium ions%3B member of SSS family of sodium/solute symporters%3B the imported panthothenate is phosphorylated by panthothenate kinase gene gene377 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01890 XM56_01895 XM56_01895 XM56_01895 454939 455181 - hypothetical protein gene gene378 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01895 XM56_01900 XM56_01900 XM56_01900 455320 456669 - acetyl-CoA carboxylase an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase%2C an enzyme that catalyzes the formation of malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism gene gene379 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01900 XM56_01905 XM56_01905 XM56_01905 456681 457145 - acetyl-CoA carboxylase composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex%2C the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism gene gene380 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01905 XM56_01910 XM56_01910 XM56_01910 457178 457630 - 3-dehydroquinate dehydratase gene gene381 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01910 XM56_01915 XM56_01915 XM56_01915 457839 458438 - sulfite oxidase subunit YedZ in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY%3B sulfite oxidase activity not demonstrated%3B contains heme gene gene382 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01915 XM56_01920 XM56_01920 XM56_01920 458438 459472 - TMAO/DMSO reductase in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase%3B requires inner membrane anchor protein YedZ gene gene383 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01920 XM56_01925 XM56_01925 XM56_01925 459626 460603 - quinone oxidoreductase gene gene384 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01925 XM56_01930 XM56_01930 XM56_01930 460888 462807 + regulatory protein CsrD regulates the degradation of the small RNAs CsrB and CsrC%3B may function to targate RNase E to specific RNA molecules gene gene385 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01930 XM56_01935 XM56_01935 XM56_01935 463142 464185 + rod shape-determining protein MreB gene gene386 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01935 XM56_01940 XM56_01940 XM56_01940 464285 465271 + rod shape-determining protein MreC gene gene387 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01940 XM56_01945 XM56_01945 XM56_01945 465268 465756 + rod shape-determining protein MreD part of cell wall structural complex MreBCD%3B transmembrane component gene gene388 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01945 XM56_01950 XM56_01950 XM56_01950 465770 466363 + septum formation inhibitor Maf Maf%3B overexpression in Bacillus subtilis inhibits septation in the dividing cell gene gene389 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01950 XM56_01955 XM56_01955 XM56_01955 466353 467822 + ribonuclease G involved in the processing of the 5'end of 16S rRNA gene gene390 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01955 XM56_01960 XM56_01960 XM56_01960 468045 471899 + hypothetical protein gene gene391 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01960 XM56_01965 XM56_01965 XM56_01965 471896 472756 + amidohydrolase gene gene392 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01965 XM56_01970 XM56_01970 tldD tldD 472768 474213 + protease TldD responsible for the proteolytic maturation of the E. coli pMccB17 plasmid-encoded microcin B17%2C an exported protein that targets the essential topoisomerase II DNA gyrase%3B degrades the E. coli plasmid F-encoded CcdA gene gene393 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01970 XM56_01975 XM56_01975 phosphatidylinositol kinase phosphatidylinositol kinase 474267 475561 - disrupted pseudogene gene394 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01975 XM56_01980 XM56_01980 XM56_01980 475558 475836 - transcriptional regulator gene gene395 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01980 XM56_01985 XM56_01985 XM56_01985 476246 479158 - toxin gene gene396 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01985 XM56_01990 XM56_01990 toxin toxin 479994 482081 - disrupted pseudogene gene397 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01990 XM56_01995 XM56_01995 XM56_01995 482267 482626 - hypothetical protein gene gene398 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_01995 XM56_02000 XM56_02000 XM56_02000 482623 483024 - peptidase M15 gene gene399 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02000 XM56_02005 XM56_02005 XM56_02005 483033 483344 - holin gene gene400 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02005 XM56_02010 XM56_02010 toxin toxin 483421 487922 - disrupted pseudogene gene401 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02010 XM56_02015 XM56_02015 XM56_02015 487979 490129 - toxin subunit gene gene402 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02015 XM56_02020 XM56_02020 toxin toxin 490687 491508 - disrupted pseudogene gene403 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02020 XM56_02025 XM56_02025 toxin toxin 492299 493984 - disrupted pseudogene gene404 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02025 XM56_02030 XM56_02030 XM56_02030 494064 494930 - LysR family transcriptional regulator gene gene405 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02030 XM56_02035 XM56_02035 XM56_02035 495180 496091 - transcriptional regulator for aaeXAB operon gene gene406 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02035 XM56_02040 XM56_02040 XM56_02040 496417 496620 + transporter membrane protein AaeX%3B the gene is a member of the aaeXAB operon gene gene407 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02040 XM56_02045 XM56_02045 XM56_02045 496628 497563 + p-hydroxybenzoic acid efflux subunit AaeA with AaeB forms an efflux pump whose substrates are p-hydroxybenzoic acid%2C 6-hydroxy-2-naphthoic and 2-hydroxycinnamate gene gene408 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02045 XM56_02050 XM56_02050 XM56_02050 497565 499520 + p-hydroxybenzoic acid efflux subunit AaeB with AaeA forms an efflux pump whose substrates are p-hydroxybenzoic acid 6-hydroxy-2-naphthoic and 2-hydroxycinnamate gene gene409 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02050 XM56_02055 XM56_02055 gabD gabD 499642 501135 + succinate-semialdehyde dehydrogenase catalyzes the formation of succinate from succinate semialdehyde%3B NADP dependent gene gene410 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02055 XM56_02060 XM56_02060 XM56_02060 501233 501706 + ribonuclease gene gene411 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02060 XM56_02065 XM56_02065 XM56_02065 501711 501977 + hypothetical protein gene gene412 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02065 XM56_02070 XM56_02070 XM56_02070 502009 502554 - hypothetical protein gene gene413 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02070 XM56_02075 XM56_02075 pmbA pmbA 502723 504063 + peptidase PmbA protease involved in proteolytic processing of the antibiotic Microcin B17 and in sensitivity to the DNA gyrase inhibitor LetD gene gene414 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02075 XM56_02080 XM56_02080 XM56_02080 504455 505504 - transposase gene gene415 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02080 XM56_02085 XM56_02085 XM56_02085 505783 506169 + cytochrome B562 gene gene416 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02085 XM56_02090 XM56_02090 XM56_02090 506217 506627 - nucleoside diphosphate kinase regulator Regulates the synthesis of nucleoside triphosphates for nucleic acid synthesis%2C CTP for lipid synthesis%2C and GTP for protein elongation gene gene417 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02090 XM56_02095 XM56_02095 XM56_02095 507159 507503 + glycine dehydrogenase gene gene418 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02095 XM56_02100 XM56_02100 XM56_02100 507527 507892 + hypothetical protein gene gene419 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02100 XM56_02105 XM56_02105 XM56_02105 507892 508188 + cytoplasmic protein gene gene420 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02105 XM56_02110 XM56_02110 XM56_02110 508201 508977 + membrane protein gene gene421 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02110 XM56_02115 XM56_02115 XM56_02115 508999 509649 + membrane protein gene gene422 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02115 XM56_02120 XM56_02120 XM56_02120 509733 510902 + dihydroorotase Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides gene gene423 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02120 XM56_02125 XM56_02125 XM56_02125 510886 511998 + L-seryl-tRNA selenium transferase gene gene424 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02125 XM56_02130 XM56_02130 XM56_02130 512002 512742 + 2-dehydro-3-deoxyphosphooctonate aldolase gene gene425 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02130 XM56_02135 XM56_02135 XM56_02135 512872 514113 + 6-phosphogluconolactonase gene gene426 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02135 XM56_02140 XM56_02140 XM56_02140 514216 516114 + transcription antiterminator BglG gene gene427 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02140 XM56_02145 XM56_02145 XM56_02145 516186 516491 - XRE family transcriptional regulator gene gene428 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02145 XM56_02150 XM56_02150 XM56_02150 516491 516769 - Killer protein gene gene429 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02150 XM56_02155 XM56_02155 XM56_02155 516849 519569 - magnesium ABC transporter ATPase P-type%3B involved in magnesium transport into the cytoplasm gene gene430 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02155 XM56_02160 XM56_02160 treR treR 520341 521288 + trehalose repressor regulates genes involved in trehalose metabolism%3B binds the intermediate trehalose-6-phosphate%3B binds a dimer%3B regulates treBC operon gene gene431 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02160 XM56_02165 XM56_02165 XM56_02165 521505 522920 + PTS system trehalose(maltose)-specific transporter subunits IIBC phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel gene gene432 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02165 XM56_02170 XM56_02170 XM56_02170 522986 524647 + trehalose-6-phosphate hydrolase gene gene433 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02170 XM56_02175 XM56_02175 XM56_02175 524989 525723 - peptidase gene gene434 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02175 XM56_02180 XM56_02180 XM56_02180 525747 526568 - transglutaminase gene gene435 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02180 XM56_02185 XM56_02185 XM56_02185 526565 527494 - hypothetical protein gene gene436 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02185 XM56_02190 XM56_02190 XM56_02190 527488 528924 - hypothetical protein gene gene437 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02190 XM56_02195 XM56_02195 XM56_02195 529192 529578 - endoribonuclease L-PSP has endoribonuclease activity on mRNA gene gene438 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02195 XM56_02200 XM56_02200 XM56_02200 530072 530536 - aspartate carbamoyltransferase regulatory subunit involved in the allosteric regulation of aspartate carbamoyltransferase gene gene439 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02200 XM56_02205 XM56_02205 XM56_02205 530548 531483 - aspartate carbamoyltransferase catalytic subunit gene gene440 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02205 XM56_02210 XM56_02210 XM56_02210 532611 532883 - phosphohistidinoprotein-hexose phosphotransferase gene gene441 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02210 XM56_02215 XM56_02215 XM56_02215 532884 533735 - glmZ(sRNA)-inactivating NTPase glucosamine-6-phosphate regulated%3B inactivates the glmS upregulator glmZ gene gene442 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02215 XM56_02220 XM56_02220 XM56_02220 533814 534296 - PTS system nitrogen regulatory protein IIA(Ntr) involved in nitrogen metabolism%3B protein IIA is phosphorylated by enzyme I(Ntr) gene gene443 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02220 XM56_02225 XM56_02225 XM56_02225 534467 534754 - ribosome hibernation promoting factor HPF YhbH%3B resting ribosome-binding protein involved in ribosome stabilization and preservation in stationary phase%3B binds specifically 100S ribosomes (an inactive ribosome product of a 70S ribosome dimerization)%3B seems to be involved in modulation of the sigma(54) (RpoN) activity for quorum sensing gene gene444 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02225 XM56_02230 XM56_02230 XM56_02230 534778 536211 - RNA polymerase factor sigma-54 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism%3B the rhizobia often have 2 copies of this sigma factor%3B in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation%3B in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions%2C rpoN1 gene was regulated in response to oxygen gene gene445 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02230 XM56_02235 XM56_02235 XM56_02235 536415 537140 - sugar ABC transporter ATP-binding protein gene gene446 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02235 XM56_02240 XM56_02240 XM56_02240 537147 537692 - lipopolysaccharide transporter LptA%3B periplasmic binding protein part of a putative ABC superfamily of uptake transporters%3B interacts with LptB protein%2C the ATP binding component of the uptake system gene gene447 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02240 XM56_02245 XM56_02245 XM56_02245 537676 538239 - lipopolysaccharide transporter gene gene448 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02245 XM56_02250 XM56_02250 XM56_02250 538236 538799 - 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase forms homotetramers%3B catalyzes hydrolysis of KDO 8-P to KDO and inorganic phosphate%3B functions in lipopolysaccharide biosynthesis gene gene449 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02250 XM56_02255 XM56_02255 XM56_02255 538813 539799 - D-arabinose 5-phosphate isomerase gene gene450 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02255 XM56_02260 XM56_02260 XM56_02260 539830 540804 - sodium:calcium antiporter gene gene451 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02260 XM56_02265 XM56_02265 XM56_02265 541248 542051 + ABC transporter ATP-binding protein ABC transporter maintaining outer membrane lipid asymmetry gene gene452 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02265 XM56_02270 XM56_02270 XM56_02270 542066 542848 + ABC transporter permease gene gene453 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02270 XM56_02275 XM56_02275 XM56_02275 542853 543413 + phospholipid ABC transporter substrate-binding protein gene gene454 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02275 XM56_02280 XM56_02280 XM56_02280 543426 544052 + ABC transporter substrate-binding protein involved in maintaining outer membrane lipid asymmetry gene gene455 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02280 XM56_02285 XM56_02285 XM56_02285 544055 544396 + anti-sigma B factor antagonist gene gene456 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02285 XM56_02290 XM56_02290 XM56_02290 544571 544825 + cell division protein BolA gene gene457 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02290 XM56_02295 XM56_02295 XM56_02295 544947 546215 + UDP-N-acetylglucosamine 1-carboxyvinyltransferase gene gene458 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02295 XM56_02300 XM56_02300 XM56_02300 546293 547381 - serine endoprotease gene gene459 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02300 XM56_02305 XM56_02305 XM56_02305 547470 548843 - serine endoprotease DegQ gene gene460 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02305 XM56_02310 XM56_02310 XM56_02310 549305 549709 - cytochrome D ubiquinol oxidase subunit III gene gene461 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02310 XM56_02315 XM56_02315 XM56_02315 549933 551060 + ATPase gene gene462 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02315 XM56_02320 XM56_02320 XM56_02320 551393 551821 + 50S ribosomal protein L13 gene gene463 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02320 XM56_02325 XM56_02325 XM56_02325 551836 552228 + 30S ribosomal protein S9 gene gene464 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02325 XM56_02330 XM56_02330 sspA sspA 552623 553264 + stringent starvation protein A transcriptional activator%3B required for activation of bacteriophage P1 late promoter%3B induced by starvation gene gene465 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02330 XM56_02335 XM56_02335 XM56_02335 553270 553785 + Clp protease ClpP gene gene466 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02335 XM56_02340 XM56_02340 XM56_02340 553836 554018 - hypothetical protein gene gene467 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02340 XM56_02345 XM56_02345 XM56_02345 554027 554512 - hypothetical protein gene gene468 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02345 XM56_02350 XM56_02350 XM56_02350 554966 556384 - glutamate synthase gene gene469 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02350 XM56_02355 XM56_02355 gltB gltB 556394 560854 - glutamate synthase catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate gene gene470 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02355 XM56_02360 XM56_02360 XM56_02360 561551 562453 + hypothetical protein gene gene471 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02360 XM56_02365 XM56_02365 XM56_02365 562546 564882 + aerobic respiration control sensor protein ArcB sensor-regulator protein which regulates the expression of many genes in response to respiratory growth conditions including anaerobic repression of the arc modulon%3B hybrid sensory histidine kinase in two-component regulatory system with ArcA gene gene472 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02365 XM56_02370 XM56_02370 XM56_02370 565123 565776 + isoprenoid biosynthesis protein gene gene473 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02370 XM56_02375 XM56_02375 mtgA mtgA 565773 566498 + peptidoglycan transglycosylase glycosyltransferase%3B polymerizes glycan strands in the peptidoglycan gene gene474 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02375 XM56_02380 XM56_02380 XM56_02380 566723 567298 - membrane protein gene gene475 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02380 XM56_02385 XM56_02385 XM56_02385 567309 567899 - DnaA initiator-associating protein DiaA Required for the timely initiation of chromosomal replication via direct interactions with the dnaA initiator protein gene gene476 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02385 XM56_02390 XM56_02390 XM56_02390 567955 568308 - hypothetical protein gene gene477 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02390 XM56_02395 XM56_02395 XM56_02395 568442 570403 - penicillin-binding protein gene gene478 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02395 XM56_02400 XM56_02400 XM56_02400 570466 571365 + 16S rRNA methyltransferase gene gene479 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02400 XM56_02405 XM56_02405 XM56_02405 572218 572616 - hypothetical protein gene gene481 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02405 XM56_02410 XM56_02410 XM56_02410 573564 574106 + fimbrial protein gene gene482 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02410 XM56_02415 XM56_02415 XM56_02415 574212 574877 + pilus assembly protein PapD gene gene483 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02415 XM56_02420 XM56_02420 XM56_02420 575030 577630 + pilus assembly protein PapC gene gene484 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02420 XM56_02425 XM56_02425 XM56_02425 577722 578891 + oxidoreductase gene gene485 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02425 XM56_02430 XM56_02430 XM56_02430 579098 580000 - LysR family transcriptional regulator gene gene486 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02430 XM56_02435 XM56_02435 XM56_02435 580184 581179 + aldehyde oxidase gene gene487 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02435 XM56_02440 XM56_02440 XM56_02440 581310 582365 + hydroxyacid dehydrogenase gene gene488 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02440 XM56_02445 XM56_02445 XM56_02445 582431 583135 - pirin gene gene489 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02445 XM56_02450 XM56_02450 XM56_02450 583380 584276 + LysR family transcriptional regulator gene gene490 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02450 XM56_02455 XM56_02455 XM56_02455 584293 585279 - glutathionyl-hydroquinone reductase YqjG gene gene491 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02455 XM56_02460 XM56_02460 XM56_02460 585450 585845 - membrane protein gene gene492 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02460 XM56_02465 XM56_02465 XM56_02465 586270 586554 - cell division protein FtsH gene gene493 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02465 XM56_02470 XM56_02470 XM56_02470 586551 586946 - membrane protein gene gene494 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02470 XM56_02475 XM56_02475 XM56_02475 586949 587254 - hypothetical protein gene gene495 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02475 XM56_02480 XM56_02480 XM56_02480 587379 587765 - hypothetical protein gene gene496 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02480 XM56_02485 XM56_02485 XM56_02485 587951 588340 - modulator protein gene gene497 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02485 XM56_02490 XM56_02490 XM56_02490 588337 589029 - membrane protein gene gene498 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02490 XM56_02495 XM56_02495 XM56_02495 589224 589718 - hypothetical protein gene gene499 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02495 XM56_02500 XM56_02500 XM56_02500 590170 590952 - transcriptional regulator regulates the expression of uxuBA gene gene500 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02500 XM56_02505 XM56_02505 XM56_02505 591191 592492 - hexuronate transporter involved in the transport of aldohexuronates gene gene501 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02505 XM56_02510 XM56_02510 XM56_02510 593021 594430 + glucuronate isomerase catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate%3B functions in glucuronic and galacturonic metabolism gene gene502 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02510 XM56_02515 XM56_02515 XM56_02515 594552 596003 + altronate oxidoreductase catalyzes the formation of D-tagaturonate from D-altronate gene gene503 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02515 XM56_02520 XM56_02520 XM56_02520 596014 597504 + altronate hydrolase gene gene504 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02520 XM56_02525 XM56_02525 XM56_02525 597675 598211 + membrane protein gene gene505 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02525 XM56_02530 XM56_02530 XM56_02530 598261 599517 - serine/threonine protein kinase gene gene506 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02530 XM56_02535 XM56_02535 XM56_02535 599823 600809 - membrane protein gene gene507 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02535 XM56_02540 XM56_02540 XM56_02540 600862 601131 + hypothetical protein gene gene508 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02540 XM56_02545 XM56_02545 XM56_02545 601318 602319 - oxidoreductase gene gene509 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02545 XM56_02550 XM56_02550 XM56_02550 602409 602912 - metal-dependent hydrolase gene gene510 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02550 XM56_02555 XM56_02555 XM56_02555 603155 604429 - pertactin family virulence factor/autotransporter precursor gene gene511 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02555 XM56_02560 XM56_02560 hypothetical protein hypothetical protein 604649 605137 - disrupted pseudogene gene512 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02560 XM56_02565 XM56_02565 XM56_02565 605591 608536 - pertactin family virulence factor/autotransporter gene gene513 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02565 XM56_02570 XM56_02570 XM56_02570 608937 610124 + 23S rRNA methyltransferase gene gene514 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02570 XM56_02575 XM56_02575 XM56_02575 610762 611781 - transposase gene gene515 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02575 XM56_02580 XM56_02580 fadH fadH 611975 613996 - 2%2C4-dienoyl-CoA reductase catalyzes the formation of trans-2- enoyl-CoA from 2%2C4-dienoyl-CoA gene gene516 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02580 XM56_02585 XM56_02585 XM56_02585 614146 615045 - membrane protein gene gene517 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02585 XM56_02590 XM56_02590 XM56_02590 615198 615770 - acid-resistance membrane protein gene gene518 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02590 XM56_02595 XM56_02595 HxlR family transcriptional regulator HxlR family transcriptional regulator 616025 616263 + disrupted pseudogene gene519 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02595 XM56_02600 XM56_02600 XM56_02600 616584 617984 + glutamate decarboxylase gene gene520 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02600 XM56_02605 XM56_02605 XM56_02605 618059 619615 + amino acid transporter gene gene521 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02605 XM56_02610 XM56_02610 XM56_02610 619685 620629 + glutaminase catalyzes the formation of glutamate from glutamine gene gene522 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02610 XM56_02615 XM56_02615 murP murP 620692 622161 - PTS system N-acetylmuramic acid transporter subunits IIBC belongs to PEP-dependent PTS system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel%3B requires crr-encoded enzyme IIA-glucose component gene gene523 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02615 XM56_02620 XM56_02620 murQ murQ 622164 623072 - N-acetylmuramic acid-6-phosphate etherase catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate%3B involved in MurNAc dissimilation pathway gene gene524 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02620 XM56_02625 XM56_02625 XM56_02625 623300 624160 + XRE family transcriptional regulator gene gene525 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02625 XM56_02630 XM56_02630 XM56_02630 624516 626387 + glycosyl hydrolase gene gene526 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02630 XM56_02635 XM56_02635 XM56_02635 626405 627481 + hypothetical protein gene gene527 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02635 XM56_02640 XM56_02640 XM56_02640 627534 628865 + hypothetical protein gene gene528 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02640 XM56_02645 XM56_02645 XM56_02645 629007 629083 - tRNA-Met tRNA gene529 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02645 XM56_02650 XM56_02650 XM56_02650 629623 630642 - transposase gene gene530 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02650 XM56_02655 XM56_02655 XM56_02655 630854 632692 - RNA polymerase sigma factor RpoD sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this is the primary sigma factor of bacteria gene gene531 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02655 XM56_02660 XM56_02660 dnaG dnaG 632850 634598 - DNA primase synthesizes RNA primers at the replication forks gene gene532 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02660 XM56_02665 XM56_02665 rpsU rpsU 634735 634950 - 30S ribosomal protein S21 a small basic protein that is one of the last in the subunit assembly%3B omission does not prevent assembly but the subunit is inactive%3B binds central domain of 16S rRNA gene gene533 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02665 XM56_02670 XM56_02670 XM56_02670 635324 636337 + UGMP family protein universal genome maintenance protein%3B Kae1/Qri7/OSGEP/YgjD family protein%3B in Archaea%2C some Kae1 are found as fusion proteins similar to two distinct proteins in yeast that are involved in the KEOPS complex%3B kinase associated endopeptidase 1 (Kae1) and a serine/threonine protein kinase (Bud32)%3B in Pyrococcus Kae1 has atypical AP endonuclease activity and inhibits the kinase activity of Bud32%3B the protein is essential in Escherichia coli and Bacillus subtilis gene gene534 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02670 XM56_02675 XM56_02675 XM56_02675 636493 637146 - glycerol-3-phosphate acyltransferase involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis%3B functions with PlsX gene gene535 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02675 XM56_02680 XM56_02680 folB folB 637254 637613 + dihydroneopterin aldolase catalyzes the conversion of 7%2C8-dihydroneopterin to 6-hydroxymethyl-7%2C8-dihydropterin and can also catalyze the epimerization of carbon 2' of dihydroneopterin and dihydromonapterin gene gene536 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02680 XM56_02685 XM56_02685 XM56_02685 637898 638716 + UDP pyrophosphate phosphatase BacA%3B phosphatase activity in Escherichia coli not kinase%3B involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell gene gene537 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02685 XM56_02690 XM56_02690 XM56_02690 638939 640177 - tRNA nucleotidyl transferase gene gene538 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02690 XM56_02695 XM56_02695 XM56_02695 640224 640844 - hypothetical protein gene gene539 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02695 XM56_02700 XM56_02700 XM56_02700 641170 642477 + adenylate cyclase gene gene540 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02700 XM56_02705 XM56_02705 XM56_02705 642622 645474 + bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase%3B also catalyzes the reverse reaction - deadenylation%3B adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme gene gene541 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02705 XM56_02710 XM56_02710 XM56_02710 645600 647030 + heptose 1-phosphate adenyltransferase catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D%2CD-heptose-1%2C7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D%2CD-heptose gene gene542 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02710 XM56_02715 XM56_02715 XM56_02715 647227 648420 + transporter uncharacterized member of the APC superfamily of amino acid transporters%3B unknown function gene gene543 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02715 XM56_02720 XM56_02720 XM56_02720 648491 648772 - hypothetical protein gene gene544 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02720 XM56_02725 XM56_02725 ribB ribB 649238 649876 + 3%2C4-dihydroxy-2-butanone 4-phosphate synthase DHBP synthase%3B functions during riboflavin biosynthesis gene gene545 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02725 XM56_02730 XM56_02730 XM56_02730 650151 650933 + dioxygenase seems to be involved in biofilm formation%3B in asymptomatic bacteriuria E. coli strains 83972 and VR50%2C the ygiD gene is upregulated during biofilm formation in urine gene gene546 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02730 XM56_02735 XM56_02735 XM56_02735 651106 652266 - hypothetical protein gene gene547 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02735 XM56_02740 XM56_02740 XM56_02740 652277 652966 - hypothetical protein gene gene548 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02740 XM56_02745 XM56_02745 XM56_02745 653217 654698 - membrane protein gene gene549 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02745 XM56_02750 XM56_02750 nudF nudF 655222 655854 + ADP-ribose pyrophosphatase ADP-sugar pyrophosphatase%3B catalyzes the formation of D-ribose 5-phosphate from ADP-ribose%3B can also act on ADP-mannose and ADP-glucose gene gene550 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02750 XM56_02755 XM56_02755 XM56_02755 655866 656291 + dehydrogenase gene gene551 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02755 XM56_02760 XM56_02760 XM56_02760 656371 657198 + diguanylate phosphodiesterase gene gene552 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02760 XM56_02765 XM56_02765 XM56_02765 657199 657780 + esterase Displays esterase activity toward palmitoyl-CoA and pNP-butyrate gene gene553 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02765 XM56_02770 XM56_02770 XM56_02770 657895 659790 + DNA topoisomerase IV subunit B decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling gene gene554 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02770 XM56_02775 XM56_02775 XM56_02775 659794 660717 + LysR family transcriptional regulator gene gene555 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02775 XM56_02780 XM56_02780 XM56_02780 660820 661125 - quinol monooxygenase catalyzes the oxidation of menadiol to menadione gene gene556 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02780 XM56_02785 XM56_02785 XM56_02785 661158 661751 - NADPH quinone reductase MdaB involved in drug resistance gene gene557 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02785 XM56_02790 XM56_02790 XM56_02790 662063 664339 + DNA topoisomerase IV subunit A decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling gene gene558 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02790 XM56_02795 XM56_02795 XM56_02795 664524 665255 + acyl-phosphate glycerol 3-phosphate acyltransferase gene gene559 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02795 XM56_02800 XM56_02800 XM56_02800 665418 666845 + cell division protein FtsI septal ring component that protects the divisome from stress gene gene560 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02800 XM56_02805 XM56_02805 XM56_02805 667029 669332 + hypothetical protein gene gene561 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02805 XM56_02810 XM56_02810 dkgA dkgA 669334 670167 - 2%2C5-diketo-D-gluconic acid reductase methylglyoxal reductase/beta-keto ester reductase%3B catalyzes the reduction of 2%2C5-diketo-D-gluconic acid to 2-keto-L-gulonic acid%3B also catalyzes the reduction of methylglyoxal%2C ethyl-2-methylacetoacetate and ethyl-acetoacetate gene gene562 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02810 XM56_02815 XM56_02815 XM56_02815 670385 671542 - aldehyde reductase gene gene563 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02815 XM56_02820 XM56_02820 XM56_02820 671776 672669 + AraC family transcriptional regulator gene gene564 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02820 XM56_02825 XM56_02825 XM56_02825 672728 673390 - membrane protein gene gene565 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02825 XM56_02830 XM56_02830 XM56_02830 673596 674807 - cystathionine beta-lyase catalyzes the formation of L-homocysteine from cystathionine gene gene566 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02830 XM56_02835 XM56_02835 XM56_02835 675586 676299 + biopolymer transporter ExbB membrane spanning protein in TonB-ExbB-ExbD complex%3B involved in the tonB-independent energy-dependent transport iron-siderophore complexes and vitamin B12 into the cell gene gene567 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02835 XM56_02840 XM56_02840 XM56_02840 676303 676728 + biopolymer transporter ExbD membrane spanning protein in TonB-ExbB-ExbD complex%3B involved in the tonB-independent energy-dependent transport iron-siderophore complexes and vitamin B12 into the cell gene gene568 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02840 XM56_02845 XM56_02845 XM56_02845 676780 678153 - tight adherance operon protein gene gene569 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02845 XM56_02850 XM56_02850 XM56_02850 678189 678767 - pseudopilin gene gene570 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02850 XM56_02855 XM56_02855 tight adherance operon protein tight adherance operon protein 678751 679211 - disrupted pseudogene gene571 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02855 XM56_02860 XM56_02860 XM56_02860 679216 679965 - tight adherance operon protein gene gene572 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02860 XM56_02865 XM56_02865 XM56_02865 679958 680782 - tight adherance operon protein gene gene573 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02865 XM56_02870 XM56_02870 XM56_02870 680779 681660 - tight adherance operon protein gene gene574 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02870 XM56_02875 XM56_02875 XM56_02875 681657 682943 - pilus assembly protein CpaF gene gene575 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02875 XM56_02880 XM56_02880 XM56_02880 682963 684081 - pilus assembly protein CpaE gene gene576 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02880 XM56_02885 XM56_02885 XM56_02885 684072 684353 - hypothetical protein gene gene577 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02885 XM56_02890 XM56_02890 XM56_02890 684350 685711 - secretin gene gene578 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02890 XM56_02895 XM56_02895 XM56_02895 685708 686541 - tight adherance operon protein gene gene579 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02895 XM56_02900 XM56_02900 XM56_02900 686586 686972 - tight adherance operon protein gene gene580 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02900 XM56_02905 XM56_02905 XM56_02905 687076 687270 - pilus assembly protein gene gene581 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02905 XM56_02910 XM56_02910 XM56_02910 687469 688068 - membrane protein gene gene582 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02910 XM56_02915 XM56_02915 XM56_02915 688620 689285 + alpha-ketoglutarate-dependent dioxygenase oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA lesions gene gene583 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02915 XM56_02920 XM56_02920 XM56_02920 689352 689786 - hypothetical protein gene gene584 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02920 XM56_02925 XM56_02925 XM56_02925 690363 690578 - DNA breaking-rejoining protein gene gene585 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02925 XM56_02930 XM56_02930 XM56_02930 691878 693104 + membrane protein gene gene586 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02930 XM56_02935 XM56_02935 XM56_02935 693798 694559 + AraC family transcriptional regulator gene gene587 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02935 XM56_02940 XM56_02940 integrase integrase 695531 696142 + disrupted pseudogene gene588 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02940 XM56_02945 XM56_02945 XM56_02945 696417 697547 + permease gene gene589 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02945 XM56_02950 XM56_02950 XM56_02950 697544 698752 + membrane protein gene gene590 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02950 XM56_02955 XM56_02955 XM56_02955 698676 699488 + membrane protein gene gene591 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02955 XM56_02960 XM56_02960 XM56_02960 699481 700110 + macrolide ABC transporter ATP-binding protein gene gene592 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02960 XM56_02965 XM56_02965 XM56_02965 700175 700429 + transcriptional regulator gene gene593 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02965 XM56_02970 XM56_02970 XM56_02970 701114 701317 + transposase gene gene594 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02970 XM56_02975 XM56_02975 XM56_02975 701520 701849 - transposase gene gene595 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02975 XM56_02980 XM56_02980 XM56_02980 702004 702321 - transposase gene gene596 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02980 XM56_02985 XM56_02985 XM56_02985 703001 704302 + enterochelin esterase gene gene597 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02985 XM56_02990 XM56_02990 fecE fecE 704304 705122 - iron-dicitrate transporter ATP-binding subunit Part of the FecBCDE citrate-dependent iron (III) transport system gene gene598 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02990 XM56_02995 XM56_02995 XM56_02995 705119 706162 - iron ABC transporter permease gene gene599 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_02995 XM56_03000 XM56_03000 XM56_03000 706159 707226 - ABC transporter permease gene gene600 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03000 XM56_03005 XM56_03005 XM56_03005 707539 708582 - iron ABC transporter substrate-binding protein gene gene601 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03005 XM56_03010 XM56_03010 XM56_03010 709080 710390 + MFS transporter gene gene602 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03010 XM56_03015 XM56_03015 XM56_03015 710417 711400 + NAD-dependent epimerase gene gene603 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03015 XM56_03020 XM56_03020 XM56_03020 711994 713568 + chemotaxis protein gene gene604 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03020 XM56_03025 XM56_03025 XM56_03025 713779 714768 + hypothetical protein gene gene605 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03025 XM56_03030 XM56_03030 XM56_03030 714955 716649 - flagellar biosynthesis protein FlhA gene gene606 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03030 XM56_03035 XM56_03035 XM56_03035 717038 718171 - flagellar biosynthesis protein FlhB gene gene607 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03035 XM56_03040 XM56_03040 XM56_03040 718171 718944 - flagellar biosynthesis protein FliR gene gene608 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03040 XM56_03045 XM56_03045 XM56_03045 718951 719223 - flagellar biosynthesis protein FliQ gene gene609 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03045 XM56_03050 XM56_03050 XM56_03050 719225 719971 - flagellar biosynthesis protein flip gene gene610 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03050 XM56_03055 XM56_03055 XM56_03055 719992 720381 - flagellar switch protein gene gene611 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03055 XM56_03060 XM56_03060 XM56_03060 720374 721249 - flagellar motor switch protein FliM gene gene612 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03060 XM56_03065 XM56_03065 XM56_03065 721660 722718 + Fis family transcriptional regulator gene gene613 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03065 XM56_03070 XM56_03070 XM56_03070 722730 723110 + flagellar hook-basal body protein FliE gene gene614 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03070 XM56_03075 XM56_03075 fliF fliF 723120 724745 + flagellar MS-ring protein the MS-ring anchors the flagellum to the cytoplasmic membrane%3B part of the flagellar basal body which consists of four rings L%2C P%2C S%2C and M mounted on a central rod%3B the Vibrio parahaemolyticus protein is associated with the lateral flagella gene gene615 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03075 XM56_03080 XM56_03080 fliG fliG 724717 725772 + flagellar motor switch protein G One of three proteins involved in switching the direction of the flagellar rotation gene gene616 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03080 XM56_03085 XM56_03085 fliH fliH 725777 726493 + flagellar assembly protein H binds to and inhibits the function of flagella specific ATPase FliI gene gene617 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03085 XM56_03090 XM56_03090 fliI fliI 726486 727823 + ATP synthase involved in type III protein export during flagellum assembly gene gene618 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03090 XM56_03095 XM56_03095 XM56_03095 727816 728247 + flagellar export protein FliJ gene gene619 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03095 XM56_03100 XM56_03100 XM56_03100 728410 729459 + transposase gene gene620 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03100 XM56_03105 XM56_03105 XM56_03105 730028 730483 - flagellar biosynthesis protein FlgN gene gene621 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03105 XM56_03110 XM56_03110 XM56_03110 730491 730766 - flagellar regulatory protein gene gene622 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03110 XM56_03115 XM56_03115 XM56_03115 730877 731725 - flagellar basal body P-ring biosynthesis protein FlgA gene gene623 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03115 XM56_03120 XM56_03120 flgB flgB 731784 732134 + flagellar basal body rod protein FlgB with FlgF and C makes up the proximal portion of the flagellar basal body rod%3B Yersinia has 2 copies of flgB and other flagellar genes gene gene624 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03120 XM56_03125 XM56_03125 XM56_03125 732137 732562 + flagellar basal body rod protein FlgC gene gene625 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03125 XM56_03130 XM56_03130 flgD flgD 732564 733223 + flagellar basal body rod modification protein acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod%3B Yersinia%2C Vibrio parahaemolyticus%2C Bradyrhizobium and other organisms have 2 copies of some flagellar genes%3B Vibrio parahaemolyticus protein in this cluster is associated with lateral flagella production gene gene626 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03130 XM56_03135 XM56_03135 flgE flgE 733276 734469 + flagellar hook protein FlgE the hook connects flagellar basal body to the flagellar filament%3B Vibrio parahaemolyticus protein is associated with the lateral flagella gene gene627 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03135 XM56_03140 XM56_03140 XM56_03140 734469 735200 + flagellar basal body rod protein FlgF gene gene628 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03140 XM56_03145 XM56_03145 flgG flgG 735253 736038 + flagellar basal body rod protein FlgG makes up the distal portion of the flagellar basal body rod%3B Bradyrhizobium has one thick flagellum and several thin flagella%3B the Bradyrhizobium protein in this cluster is associated with the thick flagella gene gene629 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03145 XM56_03150 XM56_03150 flgH flgH 736128 736793 + flagellar basal body L-ring protein part of the basal body which consists of four rings L%2C P%2C S%2C and M mounted on a central rod%3B the Yersinia have 2 copies of flgH gene gene630 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03150 XM56_03155 XM56_03155 XM56_03155 736806 737900 + flagellar P-ring protein FlgI gene gene631 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03155 XM56_03160 XM56_03160 flgJ flgJ 737910 738203 + peptidoglycan hydrolase FlgJ%3B flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space%3B like the lateral flagella FlgJ in Vibrio parahaemolyticus this protein does not contains a C-terminal muramidase domain gene gene632 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03160 XM56_03165 XM56_03165 XM56_03165 738290 739660 + flagellar hook protein gene gene633 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03165 XM56_03170 XM56_03170 XM56_03170 739730 740611 + flagellar hook protein FlgL gene gene634 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03170 XM56_03175 XM56_03175 XM56_03175 740623 741633 + hypothetical protein gene gene635 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03175 XM56_03180 XM56_03180 XM56_03180 741950 742411 - hypothetical protein gene gene636 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03180 XM56_03185 XM56_03185 XM56_03185 742392 743447 - hypothetical protein gene gene637 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03185 XM56_03190 XM56_03190 XM56_03190 743965 745257 + flagellar protein FlaA gene gene638 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03190 XM56_03195 XM56_03195 XM56_03195 745477 746745 + flagellar hook protein gene gene639 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03195 XM56_03200 XM56_03200 XM56_03200 746745 747128 + flagellar biosynthesis protein FliS gene gene640 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03200 XM56_03205 XM56_03205 XM56_03205 747128 747457 + hypothetical protein gene gene641 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03205 XM56_03210 XM56_03210 XM56_03210 747454 748443 + flagellar hook-length control protein FliK gene gene642 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03210 XM56_03215 XM56_03215 XM56_03215 748454 748921 + flagellar biogenesis protein gene gene643 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03215 XM56_03220 XM56_03220 XM56_03220 748927 749622 + flagellar biosynthesis sigma factor sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this sigma factor directs late flagellar biosynthesis genes gene gene644 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03220 XM56_03225 XM56_03225 XM56_03225 749638 750504 + flagellar motor protein MotA With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine gene gene645 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03225 XM56_03230 XM56_03230 XM56_03230 750504 751412 + flagellar motor protein B gene gene646 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03230 XM56_03235 XM56_03235 XM56_03235 751532 751999 - membrane protein gene gene647 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03235 XM56_03240 XM56_03240 XM56_03240 752905 754020 + hydrogenase 2 small subunit involved in hydrogen uptake gene gene648 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03240 XM56_03245 XM56_03245 XM56_03245 754023 755051 + hydrogenase 2 protein HybA Fe-S ferrodoxin type component%3B participates in the periplasmic electron-transferring activity of hydrogenase 2 gene gene649 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03245 XM56_03250 XM56_03250 XM56_03250 755038 756237 + hydrogenase 2 b cytochrome subunit HybB%3B cytochrome b subunit of the hydrogenase 2 enzyme%2C composed of HybA%2C B%2C C%2C and O subunits gene gene650 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03250 XM56_03255 XM56_03255 XM56_03255 756215 757909 + hydrogenase 2 large subunit involved in hydrogen uptake gene gene651 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03255 XM56_03260 XM56_03260 hybD hybD 757909 758400 + hydrogenase 2 maturation endopeptidase protease responsible for the cleavage of a 15 amino acid peptide from the C-terminal end of the large subunit of hydrogenase 2 (HybC) gene gene652 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03260 XM56_03265 XM56_03265 XM56_03265 758393 758911 + hydrogenase gene gene653 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03265 XM56_03270 XM56_03270 hypA hypA 758904 759245 + hydrogenase nickel incorporation protein plays a role in hydrogenase nickel cofactor insertion gene gene654 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03270 XM56_03275 XM56_03275 XM56_03275 759266 760321 + hypothetical protein gene gene655 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03275 XM56_03280 XM56_03280 XM56_03280 760312 760596 + hydrogenase 2 accessory protein HypG gene gene656 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03280 XM56_03285 XM56_03285 XM56_03285 760583 761686 + hydrogenase isoenzymes formation protein HypD necessary for the synthesis of all three hydrogenase isoenzymes gene gene657 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03285 XM56_03290 XM56_03290 XM56_03290 761699 762715 + carbamoyl dehydratase HypE hydrogenase isoenzymes formation protein%3B involved in the formation of the cyanate group of the large subunit of the hydrogenase%3B catalyzes the formation of thiocyanate from thiocarbamate gene gene658 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03290 XM56_03295 XM56_03295 XM56_03295 763002 765278 + carbamoyl phosphate phosphatase carbamoyltransferase%3B involved in the formation of the cyanate group of hydrogenase%3B catalyzes the formation of carbamoyladenylate from carbamoylphosphate and then transfers the carbamoyl group to HypE gene gene659 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03295 XM56_03300 XM56_03300 XM56_03300 765372 766385 + cell division protein Fic gene gene660 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03300 XM56_03305 XM56_03305 XM56_03305 766385 767164 + hydroxyethylthiazole kinase gene gene661 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03305 XM56_03310 XM56_03310 XM56_03310 767361 768044 + hypothetical protein gene gene662 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03310 XM56_03315 XM56_03315 XM56_03315 768112 770676 - diguanylate cyclase gene gene663 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03315 XM56_03320 XM56_03320 XM56_03320 771120 772322 + hemolysin secretion protein D gene gene664 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03320 XM56_03325 XM56_03325 XM56_03325 772335 775460 + multidrug RND transporter gene gene665 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03325 XM56_03330 XM56_03330 XM56_03330 775887 776405 + transcriptional regulator gene gene666 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03330 XM56_03335 XM56_03335 XM56_03335 776761 778263 + glycine/betaine ABC transporter gene gene667 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03335 XM56_03340 XM56_03340 XM56_03340 778447 779007 + hypothetical protein gene gene668 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03340 XM56_03345 XM56_03345 XM56_03345 779187 779714 + Isochorismatase gene gene669 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03345 XM56_03350 XM56_03350 XM56_03350 779794 781413 - membrane protein gene gene670 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03350 XM56_03355 XM56_03355 XM56_03355 781544 782593 - hydrolase gene gene671 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03355 XM56_03360 XM56_03360 XM56_03360 782618 783574 - LacI family transcriptional regulator gene gene672 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03360 XM56_03365 XM56_03365 XM56_03365 783946 785349 - MFS transporter gene gene673 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03365 XM56_03370 XM56_03370 XM56_03370 785300 785494 + hypothetical protein gene gene674 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03370 XM56_03375 XM56_03375 GntR family transcriptional regulator GntR family transcriptional regulator 785988 787477 + disrupted pseudogene gene675 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03375 XM56_03380 XM56_03380 XM56_03380 787517 788434 - transporter gene gene676 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03380 XM56_03385 XM56_03385 XM56_03385 789095 790126 + methyltransferase gene gene677 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03385 XM56_03390 XM56_03390 XM56_03390 790349 791380 + methyltransferase gene gene678 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03390 XM56_03395 XM56_03395 XM56_03395 791679 792632 + iron ABC transporter substrate-binding protein gene gene679 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03395 XM56_03400 XM56_03400 XM56_03400 792642 793601 + iron ABC transporter permease gene gene680 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03400 XM56_03405 XM56_03405 XM56_03405 793591 794598 + enterobactin ABC transporter permease gene gene681 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03405 XM56_03410 XM56_03410 XM56_03410 794595 795353 + iron ABC transporter ATP-binding protein gene gene682 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03410 XM56_03415 XM56_03415 XM56_03415 795417 796202 - methionine aminopeptidase gene gene683 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03415 XM56_03420 XM56_03420 XM56_03420 796199 796450 - hypothetical protein gene gene684 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03420 XM56_03425 XM56_03425 XM56_03425 796857 798320 + hydrolase gene gene685 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03425 XM56_03430 XM56_03430 XM56_03430 798430 798720 + membrane protein gene gene686 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03430 XM56_03435 XM56_03435 XM56_03435 798730 799779 + hemolysin D gene gene687 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03435 XM56_03440 XM56_03440 XM56_03440 799763 801667 + fusaric acid resistance protein gene gene688 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03440 XM56_03445 XM56_03445 XM56_03445 801669 803189 + transporter gene gene689 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03445 XM56_03450 XM56_03450 XM56_03450 803935 806097 + ornithine decarboxylase gene gene690 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03450 XM56_03455 XM56_03455 potE potE 806219 807550 + putrescine transporter catalyzes the uptake of putrescine via a proton symport mechanism%2C as well as the efflux of putrescine by a putrescine/ornithine antiport system gene gene691 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03455 XM56_03460 XM56_03460 XM56_03460 807892 809301 + hypothetical protein gene gene692 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03460 XM56_03465 XM56_03465 XM56_03465 809691 810764 - choloylglycine hydrolase gene gene693 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03465 XM56_03470 XM56_03470 XM56_03470 810895 811290 - transposase gene gene694 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03470 XM56_03475 XM56_03475 XM56_03475 811317 811589 - transposase gene gene695 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03475 XM56_03480 XM56_03480 XM56_03480 811669 812901 + hypothetical protein gene gene696 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03480 XM56_03485 XM56_03485 XM56_03485 813072 813239 - hypothetical protein gene gene697 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03485 XM56_03490 XM56_03490 XM56_03490 813511 813819 + hypothetical protein gene gene698 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03490 XM56_03495 XM56_03495 XM56_03495 813925 814887 + integrase gene gene699 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03495 XM56_03500 XM56_03500 XM56_03500 815110 815185 - tRNA-Phe tRNA gene700 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03500 XM56_03505 XM56_03505 XM56_03505 815524 815703 - hypothetical protein gene gene701 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03505 XM56_03510 XM56_03510 XM56_03510 815844 818006 + ornithine decarboxylase gene gene702 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03510 XM56_03515 XM56_03515 XM56_03515 818075 818824 - permease gene gene703 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03515 XM56_03520 XM56_03520 mltC mltC 818995 820071 - murein transglycosylase Murein hydrolase C%3B membrane-bound%3B lytic%3B catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues gene gene704 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03520 XM56_03525 XM56_03525 XM56_03525 820209 820481 - oxidative damage protection protein protects iron-sulfur proteins against oxidative damage gene gene705 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03525 XM56_03530 XM56_03530 XM56_03530 820545 821687 - adenine glycosylase gene gene706 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03530 XM56_03535 XM56_03535 trmB trmB 821989 822708 + tRNA (guanine-N7)-methyltransferase tRNA (guanine-N(7)-)-methyltransferase%3B catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine gene gene707 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03535 XM56_03540 XM56_03540 XM56_03540 822708 823034 + hypothetical protein gene gene708 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03540 XM56_03545 XM56_03545 XM56_03545 823146 824090 + glutaminase catalyzes the formation of glutamate from glutamine gene gene709 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03545 XM56_03550 XM56_03550 XM56_03550 824193 824933 + hypothetical protein gene gene710 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03550 XM56_03555 XM56_03555 XM56_03555 825018 826148 - coproporphyrinogen III oxidase gene gene711 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03555 XM56_03560 XM56_03560 XM56_03560 826141 826734 - nucleoside-triphosphate diphosphatase HAM1-like protein%3B Rec-dependent growth%3B RgdB%3B yggV%3B it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine gene gene712 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03560 XM56_03565 XM56_03565 XM56_03565 826972 827262 - hypothetical protein gene gene713 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03565 XM56_03570 XM56_03570 XM56_03570 827259 827813 - membrane protein gene gene714 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03570 XM56_03575 XM56_03575 XM56_03575 827947 828768 - pyrroline-5-carboxylate reductase gene gene715 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03575 XM56_03580 XM56_03580 XM56_03580 828804 829499 - hypothetical protein gene gene716 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03580 XM56_03585 XM56_03585 XM56_03585 829519 830652 + hypothetical protein gene gene717 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03585 XM56_03590 XM56_03590 XM56_03590 830720 831844 - agmatine deiminase catalyzes the formation of carbamoylputrescine from agmatine in the arginine decarboxylase pathway of putrescine biosynthesis gene gene718 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03590 XM56_03595 XM56_03595 XM56_03595 831848 832732 - carbon-nitrogen hydrolase gene gene719 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03595 XM56_03600 XM56_03600 XM56_03600 832914 833336 - Holliday junction resolvase similar to RuvC resolvase with substantial differences%3B NMR structural information suggests this protein is monomeric%3B unknown cellular function gene gene720 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03600 XM56_03605 XM56_03605 XM56_03605 833336 833899 - hypothetical protein gene gene721 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03605 XM56_03610 XM56_03610 XM56_03610 834087 835040 - glutathione synthetase catalyzes the second step in the glutathione biosynthesis pathway%2C where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine %3D ADP + phosphate + glutathione gene gene722 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03610 XM56_03615 XM56_03615 XM56_03615 835066 835797 - 16S rRNA methyltransferase gene gene723 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03615 XM56_03620 XM56_03620 XM56_03620 835843 836550 - DNA-specific endonuclease I gene gene724 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03620 XM56_03625 XM56_03625 XM56_03625 836647 837159 - sprT gene gene725 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03625 XM56_03630 XM56_03630 XM56_03630 837279 837614 + ArsR family transcriptional regulator gene gene726 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03630 XM56_03635 XM56_03635 XM56_03635 837611 838042 + YeeE/YedE gene gene727 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03635 XM56_03640 XM56_03640 XM56_03640 838059 838478 + membrane protein gene gene728 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03640 XM56_03645 XM56_03645 XM56_03645 838544 839698 - S-adenosylmethionine synthetase catalyzes the formation of S-adenosylmethionine from methionine and ATP%3B methionine adenosyltransferase gene gene729 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03645 XM56_03650 XM56_03650 XM56_03650 840702 842681 + arginine decarboxylase catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis gene gene730 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03650 XM56_03655 XM56_03655 XM56_03655 842822 843136 + Rieske (2Fe-2S) protein gene gene731 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03655 XM56_03660 XM56_03660 XM56_03660 843380 844132 - metalloprotease gene gene732 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03660 XM56_03665 XM56_03665 XM56_03665 844427 846421 + transketolase catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate%3B can transfer ketol groups between several groups%3B in Escherichia coli there are two tkt genes%2C tktA expressed during exponential growth and the tktB during stationary phase gene gene733 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03665 XM56_03670 XM56_03670 gapA gapA 846760 847776 + glyceraldehyde-3-phosphate dehydrogenase required for glycolysis%3B catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate gene gene734 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03670 XM56_03675 XM56_03675 XM56_03675 847880 849043 + phosphoglycerate kinase gene gene735 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03675 XM56_03680 XM56_03680 XM56_03680 849187 850266 + fructose-bisphosphate aldolase catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1%2C6%2C bisphosphate gene gene736 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03680 XM56_03685 XM56_03685 XM56_03685 850370 851281 - protein tyrosine phosphatase gene gene737 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03685 XM56_03690 XM56_03690 XM56_03690 851562 852431 + mechanosensitive ion channel protein MscS participates in the regulation of osmotic pressure changes within the cel gene gene738 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03690 XM56_03695 XM56_03695 XM56_03695 852606 853655 + transposase gene gene739 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03695 XM56_03700 XM56_03700 XM56_03700 854228 854845 + arginine exporter protein Involved in the export of arginine gene gene740 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03700 XM56_03705 XM56_03705 XM56_03705 855056 855811 + hypothetical protein gene gene741 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03705 XM56_03710 XM56_03710 XM56_03710 855813 856706 - chromosome replication initiation inhibitor protein specific inhibitor of chromosomal initiation of replication in vitro%3B binds the three 13-mers in the origin (oriC) to block initiation of replication%3B also controls genes involved in arginine transport gene gene742 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03710 XM56_03715 XM56_03715 XM56_03715 856926 857588 + ribose 5-phosphate isomerase catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway gene gene743 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03715 XM56_03720 XM56_03720 XM56_03720 857903 859144 + D-3-phosphoglycerate dehydrogenase catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis%3B can also reduce alpha ketoglutarate to form 2-hydroxyglutarate gene gene744 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03720 XM56_03725 XM56_03725 XM56_03725 859258 859554 + integrase gene gene745 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03725 XM56_03730 XM56_03730 XM56_03730 859544 859777 + hypothetical protein gene gene746 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03730 XM56_03735 XM56_03735 XM56_03735 860367 860678 + hypothetical protein gene gene747 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03735 XM56_03740 XM56_03740 XM56_03740 860969 861316 + pyridine nucleotide-disulfide oxidoreductase gene gene748 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03740 XM56_03745 XM56_03745 XM56_03745 861372 861674 + hypothetical protein gene gene749 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03745 XM56_03750 XM56_03750 XM56_03750 861825 862349 + superoxide dismutase gene gene750 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03750 XM56_03755 XM56_03755 XM56_03755 862453 863124 + pyrroloquinoline quinone biosynthesis protein gene gene751 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03755 XM56_03760 XM56_03760 hypothetical protein hypothetical protein 863282 863809 + disrupted pseudogene gene752 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03760 XM56_03765 XM56_03765 hypothetical protein hypothetical protein 863888 864121 + disrupted pseudogene gene753 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03765 XM56_03770 XM56_03770 XM56_03770 864113 864364 + hypothetical protein gene gene754 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03770 XM56_03775 XM56_03775 XM56_03775 864772 865431 + hypothetical protein gene gene755 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03775 XM56_03780 XM56_03780 XM56_03780 865507 865869 - 6-carboxy-5%2C6%2C7%2C8-tetrahydropterin synthase gene gene756 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03780 XM56_03785 XM56_03785 cysJ cysJ 866237 868036 + sulfite reductase subunit alpha catalyzes the reduction of sulfite to sulfide in the biosynthesis of L-cysteine from sulfate%3B a flavoprotein with flavin reductase activity gene gene757 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03785 XM56_03790 XM56_03790 XM56_03790 868036 869784 + sulfite reductase subunit beta hemoprotein%3B NADPH dependent%3B with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide gene gene758 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03790 XM56_03795 XM56_03795 XM56_03795 869781 870515 + phosphoadenosine phosphosulfate reductase catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite gene gene759 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03795 XM56_03800 XM56_03800 XM56_03800 870628 871035 - hypothetical protein gene gene760 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03800 XM56_03805 XM56_03805 XM56_03805 871163 871363 - hypothetical protein gene gene761 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03805 XM56_03810 XM56_03810 XM56_03810 871550 872584 - alkaline phosphatase catalyzes the sequential removal of 2 amino-terminal arginines from alkaline phosphatase isozyme 1 to form isozymes 2 and 3 gene gene762 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03810 XM56_03815 XM56_03815 XM56_03815 872877 874295 + sirohydrochlorin ferrochelatase gene gene763 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03815 XM56_03820 XM56_03820 XM56_03820 874306 875214 + sulfate adenylyltransferase subunit 2 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP gene gene764 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03820 XM56_03825 XM56_03825 cysN cysN 875288 876724 + sulfate adenylyltransferase subunit 1 may be GTPase that regulates ATP sulfurylase activity that is involved in converting ATP and sulfate to diphosphate and adenylylsulfate%3B in Escherichia coli this enzyme functions in cysteine biosynthesis in the first step%3B forms a heterodimer with CysD%3B part of the GTP-binding elongation factor family CysN/NodQ gene gene765 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03825 XM56_03830 XM56_03830 XM56_03830 876726 877376 + adenylylsulfate kinase converts ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate%3B in Escherichia coli this enzyme functions in cysteine biosynthesis gene gene766 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03830 XM56_03835 XM56_03835 XM56_03835 877569 877886 + membrane protein gene gene767 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03835 XM56_03840 XM56_03840 XM56_03840 878254 878577 + cell division protein FtsB gene gene768 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03840 XM56_03845 XM56_03845 XM56_03845 878581 879339 + 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase gene gene769 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03845 XM56_03850 XM56_03850 ispF ispF 879354 879842 + 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate gene gene770 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03850 XM56_03855 XM56_03855 truD truD 879853 880902 + tRNA pseudouridine synthase D catalyzes the modification of U13 in tRNA(Glu) gene gene771 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03855 XM56_03860 XM56_03860 surE surE 880880 881632 + stationary phase survival protein SurE broad specificity 5'(3')-nucleotidase and polyphosphatase gene gene772 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03860 XM56_03865 XM56_03865 pcm pcm 881654 882280 + protein-L-isoaspartate O-methyltransferase catalyzes the methyl esterification of L-isoaspartyl residues that are formed in damaged proteins gene gene773 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03865 XM56_03870 XM56_03870 XM56_03870 882669 883634 + peptidase gene gene774 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03870 XM56_03875 XM56_03875 XM56_03875 883689 884687 + RNA polymerase sigma factor RpoS sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this sigma factor controls a regulon of genes required for protection against external stresses gene gene775 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03875 XM56_03880 XM56_03880 XM56_03880 884776 887331 - DNA mismatch repair protein MutS This protein performs the mismatch recognition step during the DNA repair process gene gene776 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03880 XM56_03885 XM56_03885 XM56_03885 887490 889154 - membrane protein gene gene777 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03885 XM56_03890 XM56_03890 XM56_03890 889259 889522 - faeA-like family protein gene gene778 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03890 XM56_03895 XM56_03895 XM56_03895 890446 890970 + fimbria A protein gene gene779 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03895 XM56_03900 XM56_03900 XM56_03900 891098 891601 + pilin gene gene780 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03900 XM56_03905 XM56_03905 fimbrial assembly protein fimbrial assembly protein 891628 894167 + disrupted pseudogene gene781 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03905 XM56_03910 XM56_03910 XM56_03910 894288 895034 + molecular chaperone gene gene782 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03910 XM56_03915 XM56_03915 XM56_03915 895109 895624 + exotoxin gene gene783 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03915 XM56_03920 XM56_03920 XM56_03920 895624 896118 + pilus assembly protein gene gene784 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03920 XM56_03925 XM56_03925 XM56_03925 896128 896673 + exotoxin gene gene785 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03925 XM56_03930 XM56_03930 XM56_03930 896773 897585 + exotoxin gene gene786 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03930 XM56_03935 XM56_03935 XM56_03935 897911 898099 + hypothetical protein gene gene787 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03935 XM56_03940 XM56_03940 XM56_03940 898490 899155 + thiol:disulfide interchange protein gene gene788 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03940 XM56_03945 XM56_03945 XM56_03945 899155 900111 + ABC transporter gene gene789 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03945 XM56_03950 XM56_03950 XM56_03950 900137 902287 + ABC transporter ATP-binding protein gene gene790 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03950 XM56_03955 XM56_03955 XM56_03955 902287 903462 + macrolide transporter gene gene791 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03955 XM56_03960 XM56_03960 XM56_03960 903452 905428 + macrolide transporter with MacA is involved in the export of macrolide gene gene792 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03960 XM56_03965 XM56_03965 XM56_03965 905425 906831 + RND transporter gene gene793 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03965 XM56_03970 XM56_03970 XM56_03970 906828 908078 + 3-oxoacyl-ACP synthase gene gene794 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03970 XM56_03975 XM56_03975 XM56_03975 908081 908896 + hypothetical protein gene gene795 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03975 XM56_03980 XM56_03980 XM56_03980 908910 909158 + acyl carrier protein gene gene796 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03980 XM56_03985 XM56_03985 XM56_03985 909163 909897 + 3-oxoacyl-ACP reductase gene gene797 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03985 XM56_03990 XM56_03990 XM56_03990 910144 911193 + transposase gene gene798 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03990 XM56_03995 XM56_03995 XM56_03995 911593 912756 - aminotransferase class I gene gene799 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_03995 XM56_04000 XM56_04000 XM56_04000 913022 914443 - cytochrome C peroxidase gene gene800 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04000 XM56_04005 XM56_04005 XM56_04005 914790 915131 + transcriptional regulator gene gene801 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04005 XM56_04010 XM56_04010 fusA fusA 915240 917348 - elongation factor G EF-G%3B promotes GTP-dependent translocation of the ribosome during translation%3B many organisms have multiple copies of this gene gene gene802 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04010 XM56_04015 XM56_04015 XM56_04015 917693 918040 + ArsR family transcriptional regulator gene gene803 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04015 XM56_04020 XM56_04020 XM56_04020 918081 919331 - L-sorbose 1-phosphate reductase gene gene804 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04020 XM56_04025 XM56_04025 XM56_04025 919400 920230 - PTS mannose transporter subunit IID gene gene805 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04025 XM56_04030 XM56_04030 XM56_04030 920242 921039 - PTS mannose transporter subunit IIC catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B the IIC domain forms the PTS system translocation channel and contains the specific substrate-binding site gene gene806 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04030 XM56_04035 XM56_04035 XM56_04035 921181 921672 - PTS friuctose transporter subunit IIB gene gene807 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04035 XM56_04040 XM56_04040 XM56_04040 921669 922088 - PTS sorbose transporter subunit IIA gene gene808 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04040 XM56_04045 XM56_04045 XM56_04045 922232 923191 - Cro/Cl family transcriptional regulator gene gene809 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04045 XM56_04050 XM56_04050 XM56_04050 923559 925292 - amidohydrolase gene gene810 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04050 XM56_04055 XM56_04055 XM56_04055 925348 925986 - response regulator receiver protein gene gene811 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04055 XM56_04060 XM56_04060 XM56_04060 925976 927142 - amino acid ABC transporter substrate-binding protein gene gene812 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04060 XM56_04065 XM56_04065 XM56_04065 927216 928205 - acetamidase gene gene813 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04065 XM56_04070 XM56_04070 XM56_04070 928237 928956 - ABC transporter gene gene814 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04070 XM56_04075 XM56_04075 XM56_04075 928953 929687 - branched-chain amino acid ABC transporter ATP-binding protein gene gene815 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04075 XM56_04080 XM56_04080 XM56_04080 929684 930730 - ABC transporter permease gene gene816 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04080 XM56_04085 XM56_04085 XM56_04085 930740 931609 - ABC transporter permease gene gene817 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04085 XM56_04090 XM56_04090 XM56_04090 931706 932872 - urea ABC transporter substrate-binding protein gene gene818 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04090 XM56_04095 XM56_04095 XM56_04095 933421 935064 - fumarate hydratase catalyzes the formation of malate from fumerate gene gene819 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04095 XM56_04100 XM56_04100 XM56_04100 935751 938195 + dimethyl sulfoxide reductase gene gene820 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04100 XM56_04105 XM56_04105 XM56_04105 938204 938821 + dimethyl sulfoxide reductase oxidoreductase%2C Fe-S subunit%3B terminal electron transfer protein for the reduction of DMSO gene gene821 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04105 XM56_04110 XM56_04110 XM56_04110 938823 939674 + dimethyl sulfoxide reductase gene gene822 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04110 XM56_04115 XM56_04115 XM56_04115 939671 940276 + twin-argninine leader-binding protein DmsD binds to the twin-arginine signal peptides of certain proteins%2C including dimethylsulfoxide reductase and trimethylamine N-oxide reductase that are translocated to the cytoplasmic membrane gene gene823 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04115 XM56_04120 XM56_04120 XM56_04120 940697 941746 - transposase gene gene824 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04120 XM56_04125 XM56_04125 XM56_04125 941832 943190 - MFS transporter gene gene825 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04125 XM56_04130 XM56_04130 XM56_04130 943426 943914 + hypothetical protein gene gene826 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04130 XM56_04135 XM56_04135 recA recA 944026 945090 + recombinase A catalyzes the hydrolysis of ATP in the presence of single-stranded DNA%2C the ATP-dependent uptake of single-stranded DNA by duplex DNA%2C and the ATP-dependent hybridization of homologous single-stranded DNAs gene gene827 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04135 XM56_04140 XM56_04140 XM56_04140 945400 945903 + recombinase RecX gene gene828 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04140 XM56_04145 XM56_04145 XM56_04145 946045 948672 + alanyl-tRNA synthetase gene gene829 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04145 XM56_04150 XM56_04150 XM56_04150 948926 949111 + carbon storage regulator affects carbohydrate metabolism%3B has regulatory role in many processes gene gene830 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04150 XM56_04155 XM56_04155 XM56_04155 949475 949567 + tRNA-Ser tRNA gene831 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04155 XM56_04160 XM56_04160 XM56_04160 949576 949652 + tRNA-Arg tRNA gene832 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04160 XM56_04165 XM56_04165 XM56_04165 949900 950466 + 6-phosphogluconate phosphatase YqaB%3B catalyzes the dephosphorylation of fructose 1-phosphate%2C 6-phosphogluconate and p-nitrophenyl phosphate (pNPP)%3B presents beta-phosphoglucomutase activity at a lower extent gene gene833 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04165 XM56_04170 XM56_04170 XM56_04170 950463 950891 + membrane protein gene gene834 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04170 XM56_04175 XM56_04175 XM56_04175 950974 952533 + glutamate--cysteine ligase involved in the first step of glutathione biosynthesis gene gene835 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04175 XM56_04180 XM56_04180 XM56_04180 952700 953215 + S-ribosylhomocysteinase catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2 gene gene836 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04180 XM56_04185 XM56_04185 XM56_04185 953642 954691 - transposase gene gene837 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04185 XM56_04190 XM56_04190 XM56_04190 954861 956141 - hypothetical protein gene gene838 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04190 XM56_04195 XM56_04195 XM56_04195 956211 957002 - membrane protein gene gene839 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04195 XM56_04200 XM56_04200 XM56_04200 957168 958529 + signal recognition particle gene gene840 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04200 XM56_04205 XM56_04205 rpsP rpsP 958757 959005 + 30S ribosomal protein S16 binds to lower part of 30S body where it stabilizes two domains%3B required for efficient assembly of 30S%3B in Escherichia coli this protein has nuclease activity gene gene841 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04205 XM56_04210 XM56_04210 rimM rimM 959027 959575 + 16S rRNA-processing protein RimM Essential for efficient processing of 16S rRNA gene gene842 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04210 XM56_04215 XM56_04215 trmD trmD 959614 960354 + tRNA (guanine-N1)-methyltransferase methylates guanosine-37 in various tRNAs%3B uses S-adenosyl-L-methionine to transfer methyl group to tRNA gene gene843 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04215 XM56_04220 XM56_04220 XM56_04220 960435 960791 + 50S ribosomal protein L19 gene gene844 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04220 XM56_04225 XM56_04225 XM56_04225 961000 961767 - membrane protein gene gene845 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04225 XM56_04230 XM56_04230 XM56_04230 962005 963348 - C4-dicarboxylate transporter functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate%3B similar to DcuA%3B DcuA and DcuB function as independent and mutually redundant C4-dicarboxylate (aspartate%2C malate%2C fumarate and succinate) transporters gene gene846 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04230 XM56_04235 XM56_04235 XM56_04235 963691 964407 - response regulator gene gene847 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04235 XM56_04240 XM56_04240 XM56_04240 964642 965721 + phospho-2-dehydro-3-deoxyheptonate aldolase catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate%2C tyrosine sensitive gene gene848 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04240 XM56_04245 XM56_04245 tyrA tyrA 965724 966845 + chorismate mutase catalyzes the formation of prephenate from chorismate and the formation of 4-hydroxyphenylpyruvate from prephenate in tyrosine biosynthesis gene gene849 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04245 XM56_04250 XM56_04250 pheA pheA 967125 968282 - chorismate mutase catalyzing the formation of prephenate from chorismate and the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis gene gene850 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04250 XM56_04255 XM56_04255 XM56_04255 968723 969373 - transposase gene gene851 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04255 XM56_04260 XM56_04260 XM56_04260 969340 969714 - transposase gene gene852 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04260 XM56_04265 XM56_04265 XM56_04265 970108 972681 - protein disaggregation chaperone gene gene853 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04265 XM56_04270 XM56_04270 XM56_04270 972812 973543 - hypothetical protein gene gene854 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04270 XM56_04275 XM56_04275 rluD rluD 973543 974520 - 23S rRNA pseudouridylate synthase responsible for synthesis of pseudouridine from uracil at positions 1911%2C 1915 and 1917 in 23S ribosomal RNA gene gene855 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04275 XM56_04280 XM56_04280 XM56_04280 974656 975387 + membrane biogenesis protein gene gene856 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04280 XM56_04285 XM56_04285 XM56_04285 975754 976116 + translation inhibitor protein RaiA associated with 30S ribosomal subunit%3B interferes with translation elongation gene gene857 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04285 XM56_04290 XM56_04290 XM56_04290 976241 976594 + transposase gene gene858 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04290 XM56_04295 XM56_04295 XM56_04295 977439 978987 + 16S ribosomal RNA rRNA gene859 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04295 XM56_04300 XM56_04300 XM56_04300 979183 979258 + tRNA-Glu tRNA gene860 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04300 XM56_04305 XM56_04305 XM56_04305 979629 982664 + 23S ribosomal RNA rRNA gene861 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04305 XM56_04310 XM56_04310 XM56_04310 982835 982950 + 5S ribosomal RNA rRNA gene862 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04310 XM56_04315 XM56_04315 XM56_04315 983152 983493 - lipoprotein required for high salt suppression of motility gene gene863 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04315 XM56_04320 XM56_04320 pssA pssA 983556 984911 - phosphatidylserine synthase catalyzes de novo synthesis of phosphatidylserine from CDP-diacylglycerol and L-serine which leads eventually to the production of phosphatidylethanolamine%3B bounds to the ribosome gene gene864 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04320 XM56_04325 XM56_04325 XM56_04325 985089 987731 - protein acetyltransferase catalyzes the acetylation of lysine gene gene865 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04325 XM56_04330 XM56_04330 XM56_04330 987784 988533 - DTW domain-containing protein YfiP gene gene866 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04330 XM56_04335 XM56_04335 XM56_04335 988688 989128 - thioredoxin gene gene867 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04335 XM56_04340 XM56_04340 XM56_04340 989349 990455 + methyltransferase gene gene868 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04340 XM56_04345 XM56_04345 XM56_04345 990596 991645 + transposase gene gene869 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04345 XM56_04350 XM56_04350 XM56_04350 991857 992063 + hypothetical protein gene gene870 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04350 XM56_04355 XM56_04355 emrB emrB 992060 993595 - multidrug resistance protein B multidrug MFS transporte%3B with EmrA is involved in resistance to hydrophobic antibiotics such as nalidixic acid gene gene871 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04355 XM56_04360 XM56_04360 XM56_04360 993635 994807 - multidrug transporter with ErmA and TolC forms a multidrug efflux system gene gene872 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04360 XM56_04365 XM56_04365 XM56_04365 994823 996289 - transporter gene gene873 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04365 XM56_04370 XM56_04370 XM56_04370 996337 996849 - transcriptional repressor MprA DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux%3B negative regulator of the multidrug operon emrAB gene gene874 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04370 XM56_04375 XM56_04375 XM56_04375 997021 997362 - L-valine exporter gene gene875 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04375 XM56_04380 XM56_04380 XM56_04380 997359 998132 - membrane protein gene gene876 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04380 XM56_04385 XM56_04385 XM56_04385 998386 999588 - transporter gene gene877 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04385 XM56_04390 XM56_04390 XM56_04390 1000207 1001256 + transposase gene gene878 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04390 XM56_04395 XM56_04395 XM56_04395 1001385 1001615 + hypothetical protein gene gene879 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04395 XM56_04400 XM56_04400 XM56_04400 1001769 1002155 - hypothetical protein gene gene880 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04400 XM56_04405 XM56_04405 XM56_04405 1002183 1003580 - amidase catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia gene gene881 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04405 XM56_04410 XM56_04410 XM56_04410 1003577 1003777 - hypothetical protein gene gene882 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04410 XM56_04415 XM56_04415 XM56_04415 1004051 1004890 + RpiR family transcriptional regulator gene gene883 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04415 XM56_04420 XM56_04420 XM56_04420 1005215 1006006 + amino acid ABC transporter substrate-binding protein gene gene884 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04420 XM56_04425 XM56_04425 XM56_04425 1006019 1006702 + polar amino acid ABC transporter permease gene gene885 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04425 XM56_04430 XM56_04430 XM56_04430 1006699 1007352 + amino acid ABC transporter permease gene gene886 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04430 XM56_04435 XM56_04435 XM56_04435 1007333 1008067 + amino acid ABC transporter ATP-binding protein gene gene887 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04435 XM56_04440 XM56_04440 XM56_04440 1008107 1009357 + aminotransferase V gene gene888 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04440 XM56_04445 XM56_04445 XM56_04445 1009357 1010637 + allantoate amidohydrolase gene gene889 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04445 XM56_04450 XM56_04450 XM56_04450 1010969 1012018 - transposase gene gene890 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04450 XM56_04455 XM56_04455 XM56_04455 1012133 1012903 - carbon-nitrogen hydrolase NAD(P)-binding gene gene891 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04455 XM56_04460 XM56_04460 XM56_04460 1012891 1014051 - methionine aminotransferase catalyzes the transfer of an amino moiety%3B preference for methionine followed by histidine and phenylalanine gene gene892 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04460 XM56_04465 XM56_04465 XM56_04465 1014268 1014900 + methylthioribulose-1-phosphate dehydratase catalyzes the formation of diketo methylthiopentyl phosphate from methylribulose phosphate in the methionine salvage pathway gene gene893 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04465 XM56_04470 XM56_04470 XM56_04470 1014897 1015586 + haloacid dehalogenase gene gene894 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04470 XM56_04475 XM56_04475 XM56_04475 1015583 1016125 + acireductone dioxygenase gene gene895 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04475 XM56_04480 XM56_04480 XM56_04480 1016311 1017354 - methylthioribose-1-phosphate isomerase gene gene896 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04480 XM56_04485 XM56_04485 XM56_04485 1017548 1018747 + methylthioribose kinase gene gene897 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04485 XM56_04490 XM56_04490 XM56_04490 1019930 1021336 + hemolysin secretion protein ShlB gene gene898 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04490 XM56_04495 XM56_04495 XM56_04495 1022892 1027556 + adhesin gene gene899 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04495 XM56_04500 XM56_04500 XM56_04500 1027623 1029473 + glycosyltransferase gene gene900 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04500 XM56_04505 XM56_04505 fadE fadE 1029709 1032156 - acyl-CoA dehydrogenase functions in fatty acid oxidation%3B converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA gene gene901 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04505 XM56_04510 XM56_04510 gmhA gmhA 1032411 1032992 + phosphoheptose isomerase catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate gene gene902 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04510 XM56_04515 XM56_04515 XM56_04515 1033094 1033858 + glutamine amidotransferase gene gene903 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04515 XM56_04520 XM56_04520 XM56_04520 1033832 1034587 - transpeptidase gene gene904 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04520 XM56_04525 XM56_04525 XM56_04525 1035060 1036403 + Na(+)-translocating NADH-quinone reductase subunit A uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm gene gene905 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04525 XM56_04530 XM56_04530 XM56_04530 1036407 1037648 + Na(+)-translocating NADH-quinone reductase subunit B uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm gene gene906 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04530 XM56_04535 XM56_04535 XM56_04535 1037638 1038438 + Na(+)-translocating NADH-quinone reductase subunit C uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm gene gene907 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04535 XM56_04540 XM56_04540 XM56_04540 1038431 1039060 + Na(+)-translocating NADH-quinone reductase subunit D Part of the NQR complex which catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions%2C coupled with the transport of Na(+) ions from the cytoplasm to the periplasm gene gene908 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04540 XM56_04545 XM56_04545 XM56_04545 1039067 1039663 + Na(+)-translocating NADH-quinone reductase subunit E Part of the NQR complex which consists of NqrA%2C NqrB%2C NqrC%2C NqrD%2C NqrE and NqrF%3B NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions%2C coupled with the transport of Na(+) ions from the cytoplasm to the periplasm%3B NqrE is probably involved in the second step%2C the conversion of ubisemiquinone to ubiquinol. gene gene909 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04545 XM56_04550 XM56_04550 XM56_04550 1039679 1040902 + Na(+)-translocating NADH-quinone reductase subunit F uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm gene gene910 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04550 XM56_04555 XM56_04555 XM56_04555 1040957 1041964 + thiamine biosynthesis lipoprotein gene gene911 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04555 XM56_04560 XM56_04560 XM56_04560 1041977 1042204 + hypothetical protein gene gene912 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04560 XM56_04565 XM56_04565 XM56_04565 1042344 1043294 - glycerophosphodiester phosphodiesterase gene gene913 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04565 XM56_04570 XM56_04570 XM56_04570 1043704 1044804 + D-alanine--D-alanine ligase gene gene914 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04570 XM56_04575 XM56_04575 XM56_04575 1045056 1045688 + DNA-binding protein gene gene915 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04575 XM56_04580 XM56_04580 XM56_04580 1045691 1046659 + serine dehydratase catalyzes the formation of 2-oxobutanoate from L-threonine or the formation of pyruvate from serine gene gene916 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04580 XM56_04585 XM56_04585 XM56_04585 1046659 1047051 + endoribonuclease L-PSP gene gene917 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04585 XM56_04590 XM56_04590 XM56_04590 1047154 1048212 + DNA polymerase IV involved in translesion DNA polymerization with beta clamp of polymerase III%3B belongs to Y family of polymerases%3B does not contain proofreading function gene gene918 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04590 XM56_04595 XM56_04595 XM56_04595 1048286 1049746 - aminoacyl-histidine dipeptidase catalyzes the hydrolysis of Xaa-His dipeptides gene gene919 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04595 XM56_04600 XM56_04600 XM56_04600 1050054 1050512 + xanthine-guanine phosphoribosyltransferase catalyzes the conversion of guanine%2C xanthine and%2C to a lesser extent%2C hypoxanthine to GMP%2C XMP and IMP%2C respectively gene gene920 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04600 XM56_04605 XM56_04605 frsA frsA 1050838 1052085 + fermentation/respiration switch protein forms a 1:1 complex with the unphosphorylated from of enzyme IIAGlc%3B FrsA may promote fermentation gene gene921 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04605 XM56_04610 XM56_04610 XM56_04610 1052145 1052546 + sigma factor-binding protein Crl gene gene922 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04610 XM56_04615 XM56_04615 XM56_04615 1052702 1053805 + gamma-glutamyl kinase gene gene923 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04615 XM56_04620 XM56_04620 XM56_04620 1053821 1055074 + gamma-glutamyl phosphate reductase gene gene924 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04620 XM56_04625 XM56_04625 XM56_04625 1055144 1055794 - GntR family transcriptional regulator gene gene925 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04625 XM56_04630 XM56_04630 XM56_04630 1056094 1057638 + PTS alpha-glucoside transporter subunit IIBC gene gene926 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04630 XM56_04635 XM56_04635 XM56_04635 1057650 1058972 + 6-phospho-alpha-glucosidase gene gene927 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04635 XM56_04640 XM56_04640 XM56_04640 1059176 1059925 + flagellar brake protein gene gene928 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04640 XM56_04645 XM56_04645 XM56_04645 1060300 1068945 + glycosyl transferase gene gene929 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04645 XM56_04650 XM56_04650 XM56_04650 1069074 1069328 + membrane protein gene gene930 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04650 XM56_04655 XM56_04655 XM56_04655 1069473 1069967 - GNAT family acetyltransferase gene gene931 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04655 XM56_04660 XM56_04660 XM56_04660 1070111 1070881 + SAM-dependent methyltransferase gene gene932 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04660 XM56_04665 XM56_04665 XM56_04665 1071083 1071352 + hypothetical protein gene gene933 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04665 XM56_04670 XM56_04670 XM56_04670 1071596 1072153 + methyltransferase gene gene934 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04670 XM56_04675 XM56_04675 periplasmic binding protein periplasmic binding protein 1072481 1073047 + disrupted pseudogene gene935 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04675 XM56_04680 XM56_04680 XM56_04680 1073034 1075175 + TonB-dependent receptor gene gene936 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04680 XM56_04685 XM56_04685 XM56_04685 1075417 1075941 + shikimate kinase gene gene937 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04685 XM56_04690 XM56_04690 XM56_04690 1076424 1076711 + hypothetical protein gene gene938 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04690 XM56_04695 XM56_04695 XM56_04695 1076783 1077694 - recombination associated protein Required for efficient pilin antigenic variation gene gene939 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04695 XM56_04700 XM56_04700 XM56_04700 1078033 1078947 + fructokinase catalyzes phosphorylation of fructose%3B cytosolic enzyme gene gene940 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04700 XM56_04705 XM56_04705 XM56_04705 1079139 1082828 - ATP-dependent dsDNA exonuclease gene gene941 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04705 XM56_04710 XM56_04710 XM56_04710 1082825 1084063 - exonuclease SbcD with SbcC cleaves DNA hairpin structure%2C also has 5' single-strand endonuclease activity gene gene942 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04710 XM56_04715 XM56_04715 XM56_04715 1084333 1085022 + transcriptional regulator PhoB two component response regulator for the phosphate regulon%3B PhoR phosphorylates PhoB gene gene943 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04715 XM56_04720 XM56_04720 phoR phoR 1085047 1086363 + phosphate regulon sensor protein membrane-associated histidine protein kinase that phosphorylates phoB in response to environmental signals as part of the two-component phosphate regulatory system phoR/phoB gene gene944 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04720 XM56_04725 XM56_04725 XM56_04725 1086385 1087362 + phosphate ABC transporter substrate-binding protein gene gene945 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04725 XM56_04730 XM56_04730 XM56_04730 1087727 1089046 + branched-chain amino acid ABC transporter substrate-binding protein sodium:branched-chain amino acid symporter gene gene946 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04730 XM56_04735 XM56_04735 proY proY 1089121 1090497 + proline-specific permease cryptic permease that may be involved in the transport of proline across the inner membrane%3B in Salmonella typhimurium%2C the proY gene is silent unless overexpressed on a multicopy plasmid or activated by a proZ mutation gene gene947 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04735 XM56_04740 XM56_04740 XM56_04740 1090760 1092598 + maltodextrin glucosidase gene gene948 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04740 XM56_04745 XM56_04745 XM56_04745 1092930 1093610 + short-chain dehydrogenase gene gene949 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04745 XM56_04750 XM56_04750 XM56_04750 1093678 1095441 - gamma-glutamyltransferase gene gene950 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04750 XM56_04755 XM56_04755 XM56_04755 1095898 1096050 + small toxic polypeptide gene gene951 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04755 XM56_04760 XM56_04760 XM56_04760 1096201 1096803 - peroxiredoxin gene gene952 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04760 XM56_04765 XM56_04765 XM56_04765 1097028 1097609 - ACP phosphodiesterase Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP gene gene953 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04765 XM56_04770 XM56_04770 queA queA 1097752 1098840 + S-adenosylmethionine:tRNA ribosyltransferase-isomerase Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step gene gene954 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04770 XM56_04775 XM56_04775 XM56_04775 1098949 1099638 - hydrolase gene gene955 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04775 XM56_04780 XM56_04780 XM56_04780 1100205 1101254 - transposase gene gene956 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04780 XM56_04785 XM56_04785 tgt tgt 1101513 1102649 + queuine tRNA-ribosyltransferase Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp%2C -Asn%2C -His and -Tyr) gene gene957 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04785 XM56_04790 XM56_04790 yajC yajC 1102762 1103094 + preprotein translocase subunit YajC member of preprotein translocase%3B forms a heterotrimer with SecD and SecF%3B links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex gene gene958 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04790 XM56_04795 XM56_04795 secD secD 1103155 1104969 + preprotein translocase subunit SecD part of the preprotein secretory system%3B when complexed with proteins SecF and YajC%2C SecDFyajC stimulates the proton motive force-driven protein translocation%2C and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane gene gene959 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04795 XM56_04800 XM56_04800 XM56_04800 1104980 1105948 + preprotein translocase subunit SecF gene gene960 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04800 XM56_04805 XM56_04805 XM56_04805 1106173 1107222 + transposase gene gene961 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04805 XM56_04810 XM56_04810 XM56_04810 1107821 1108462 + MFS transporter permease gene gene962 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04810 XM56_04815 XM56_04815 XM56_04815 1108590 1110278 + MFS transporter permease gene gene963 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04815 XM56_04820 XM56_04820 XM56_04820 1110350 1110799 + NrdR family transcriptional regulator gene gene964 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04820 XM56_04825 XM56_04825 ribD ribD 1111072 1112181 + 5-amino-6-(5-phosphoribosylamino)uracil reductase riboflavin biosynthesis protein which catalyzes the deamination and reduction steps in the riboflavin biosynthesis pathway%3B catalyzes the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 2%2C5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 5-amino-6-(5-phosphoribitylamino)uracil gene gene965 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04825 XM56_04830 XM56_04830 ribH ribH 1112316 1112786 + 6%2C7-dimethyl-8-ribityllumazine synthase RibE%3B 6%2C7-diimethyl-8-ribityllumazine synthase%3B DMRL synthase%3B lumazine synthase%3B beta subunit of riboflavin synthase%3B condenses 5-amino-6-(1'-D)-ribityl-amino-2%2C4(1H%2C3H)-pyrimidinedione with L-3%2C4-dihydrohy-2-butanone-4-phosphate to generate 6%2C6-dimethyl-8-lumazine (DMRL)%3B riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12)%3B involved in the last steps of riboflavin biosynthesis%3B forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli%3B in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not gene gene966 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04830 XM56_04835 XM56_04835 nusB nusB 1112812 1113228 + transcription antiterminator NusB Regulates rRNA biosynthesis by transcriptional antitermination gene gene967 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04835 XM56_04840 XM56_04840 XM56_04840 1113308 1114297 + thiamine monophosphate kinase gene gene968 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04840 XM56_04845 XM56_04845 XM56_04845 1114290 1114787 + phosphatidylglycerophosphatase hydrolyzes phosphatidylglycerophosphate to produce phosphatidylglycerol and phosphate gene gene969 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04845 XM56_04850 XM56_04850 XM56_04850 1114912 1115961 + transposase gene gene970 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04850 XM56_04855 XM56_04855 XM56_04855 1116359 1118218 - 1-deoxy-D-xylulose-5-phosphate synthase catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate gene gene971 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04855 XM56_04860 XM56_04860 XM56_04860 1118272 1119192 - geranyl transferase gene gene972 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04860 XM56_04865 XM56_04865 XM56_04865 1119197 1119451 - exodeoxyribonuclease VII small subunit catalyzes the bidirectional exonucleolytic cleavage of DNA gene gene973 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04865 XM56_04870 XM56_04870 XM56_04870 1119731 1121182 + tRNA s(4)U8 sulfurtransferase catalyzes the conversion of uridine to 4-thiouridinine tRNA%3B also required for the synthesis of the thiazole moiety gene gene974 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04870 XM56_04875 XM56_04875 XM56_04875 1121416 1122006 - oxidative-stress-resistance chaperone gene gene975 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04875 XM56_04880 XM56_04880 XM56_04880 1121969 1122880 - 2-dehydropantoate 2-reductase ketopantoate reductase%3B catalyzes the NADPH reduction of ketopantoate to pantoate%3B functions in pantothenate (vitamin B5) biosynthesis gene gene976 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04880 XM56_04885 XM56_04885 XM56_04885 1123090 1123581 + nucleotide-binding protein nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ%3B the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription gene gene977 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04885 XM56_04890 XM56_04890 XM56_04890 1123635 1124999 - membrane protein gene gene978 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04890 XM56_04895 XM56_04895 XM56_04895 1125176 1126063 - protoheme IX farnesyltransferase converts protoheme IX and farnesyl diphosphate to heme O gene gene979 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04895 XM56_04900 XM56_04900 XM56_04900 1126077 1126424 - cytochrome C oxidase gene gene980 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04900 XM56_04905 XM56_04905 XM56_04905 1126424 1127038 - cytochrome o ubiquinol oxidase subunit III gene gene981 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04905 XM56_04910 XM56_04910 XM56_04910 1127028 1129019 - cytochrome o ubiquinol oxidase subunit I gene gene982 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04910 XM56_04915 XM56_04915 XM56_04915 1129024 1129980 - ubiquinol oxidase subunit II gene gene983 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04915 XM56_04920 XM56_04920 XM56_04920 1130343 1131122 - hypothetical protein gene gene984 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04920 XM56_04925 XM56_04925 ampG ampG 1131388 1132866 - muropeptide transporter in Escherichia coli this protein is a permease involved in peptidoglycan recycling%3B member of major facilitator superfamily%3B MFS%3B inner membrane protein gene gene985 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04925 XM56_04930 XM56_04930 XM56_04930 1132944 1133522 - hypothetical protein gene gene986 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04930 XM56_04935 XM56_04935 XM56_04935 1133873 1134205 + transcriptional regulator BolA positive transcriptional regulator of morphogenetic pathway%3B controlling several genes involved in oxidative stress%2C acid stress%2C heat shock%2C osmotic shock%2C and carbon-starvation stress gene gene987 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04935 XM56_04940 XM56_04940 XM56_04940 1134206 1134409 - hypothetical protein gene gene988 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04940 XM56_04945 XM56_04945 XM56_04945 1134622 1135926 + trigger factor gene gene989 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04945 XM56_04950 XM56_04950 XM56_04950 1136383 1137006 + Clp protease ClpP gene gene990 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04950 XM56_04955 XM56_04955 clpX clpX 1137212 1138483 + Clp protease ClpX binds and unfolds substrates as part of the ClpXP protease gene gene991 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04955 XM56_04960 XM56_04960 XM56_04960 1138678 1141032 + DNA-binding protein gene gene992 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04960 XM56_04965 XM56_04965 XM56_04965 1141250 1141522 + transcriptional regulator HU subunit alpha histone-like DNA-binding protein gene gene993 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04965 XM56_04970 XM56_04970 XM56_04970 1141722 1143608 + molecular chaperone gene gene994 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04970 XM56_04975 XM56_04975 XM56_04975 1143747 1144169 + transporter gene gene995 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04975 XM56_04980 XM56_04980 XM56_04980 1144416 1144823 + thioesterase gene gene996 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04980 XM56_04985 XM56_04985 XM56_04985 1144911 1145609 - queuosine biosynthesis protein QueC YbaX%3B catalyzes the transformation of GTP to 7-cyano-7-deazaguanine (preQ0)%2C as one of the early reactions of quenosine biosynthesis%3B quenosine is a modified nucleoside that occurs at the wobble position of GUN anticodons in tRNAs for Asn%2C Asp%2C Tyr%2C and His gene gene997 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04985 XM56_04990 XM56_04990 XM56_04990 1145723 1147426 - peptide ABC transporter substrate-binding protein gene gene998 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04990 XM56_04995 XM56_04995 XM56_04995 1147530 1148351 + thiamin pyrimidine pyrophosphate hydrolase HMP-PP phosphatase%3B catalyzes the hydrolysis of 4-amino-2-methyl-5-hydroxymethylpyrimidine pyrophosphate (HMP-PP) to 4-amino-2-methyl-5-hydroxymethylpyrimidine phosphate (HMP-P) gene gene999 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_04995 XM56_05000 XM56_05000 XM56_05000 1148477 1149517 - cysteine synthase gene gene1000 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05000 XM56_05005 XM56_05005 XM56_05005 1149644 1150105 + transcriptional regulator gene gene1001 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05005 XM56_05010 XM56_05010 XM56_05010 1150380 1152146 + multidrug ABC transporter ATP-binding protein gene gene1002 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05010 XM56_05015 XM56_05015 XM56_05015 1152139 1153917 + multidrug ABC transporter ATP-binding protein gene gene1003 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05015 XM56_05020 XM56_05020 XM56_05020 1154355 1154693 + nitrogen regulatory protein P-II 1 indirectly regulates nitrogen metabolism%3B at high nitrogen levels P-II prevents the phosphorylation of NR-I%2C the transcriptional activator of the glutamine synthetase gene (glnA)%3B at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA gene gene1004 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05020 XM56_05025 XM56_05025 XM56_05025 1154733 1156022 + ammonium transporter gene gene1005 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05025 XM56_05030 XM56_05030 XM56_05030 1156136 1156999 - acyl-CoA thioesterase gene gene1006 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05030 XM56_05035 XM56_05035 XM56_05035 1157260 1157790 + hypothetical protein gene gene1007 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05035 XM56_05040 XM56_05040 XM56_05040 1157842 1158147 - 6-O-methylguanine DNA methyltransferase gene gene1008 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05040 XM56_05045 XM56_05045 XM56_05045 1158984 1159187 - gene expression modulator with Hns involved in transcriptional regulation of hemolysin%3B non-specific DNA-binding protein which affects the production of multiple proteins gene gene1009 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05045 XM56_05050 XM56_05050 XM56_05050 1159234 1159602 - Biofilm formation regulator YbaJ gene gene1010 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05050 XM56_05055 XM56_05055 XM56_05055 1159760 1160113 - hypothetical protein gene gene1011 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05055 XM56_05060 XM56_05060 XM56_05060 1160879 1161589 + ABC transporter gene gene1012 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05060 XM56_05065 XM56_05065 XM56_05065 1161603 1162460 + iron ABC transporter gene gene1013 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05065 XM56_05070 XM56_05070 XM56_05070 1162523 1163401 + metal ABC transporter substrate-binding protein gene gene1014 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05070 XM56_05075 XM56_05075 rpmJ rpmJ 1163529 1163672 - 50S ribosomal protein L36 smallest protein in the large subunit%3B similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc%3B the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion%3B the proteins in this group do not have the motif gene gene1015 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05075 XM56_05080 XM56_05080 XM56_05080 1163688 1163948 - 50S ribosomal protein L31 gene gene1016 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05080 XM56_05085 XM56_05085 XM56_05085 1164098 1165303 - transporter gene gene1017 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05085 XM56_05090 XM56_05090 XM56_05090 1165491 1165856 - hypothetical protein gene gene1018 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05090 XM56_05095 XM56_05095 XM56_05095 1166112 1167377 - mutase gene gene1019 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05095 XM56_05100 XM56_05100 XM56_05100 1167374 1168549 - hypothetical protein gene gene1020 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05100 XM56_05105 XM56_05105 XM56_05105 1168615 1168977 - hypothetical protein gene gene1021 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05105 XM56_05110 XM56_05110 XM56_05110 1169405 1172557 - multidrug transporter gene gene1022 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05110 XM56_05115 XM56_05115 XM56_05115 1172574 1173761 - multidrug transporter with AcrD and TolC forms a transport system involved in resistance to a number of compounds including lipophilic antibiotics gene gene1023 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05115 XM56_05120 XM56_05120 XM56_05120 1173906 1174556 + transcriptional regulator regulates the acrAB operon which is involved in susceptibility to dephalothin and cephaloridine gene gene1024 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05120 XM56_05125 XM56_05125 XM56_05125 1174577 1174942 + hypothetical protein gene gene1025 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05125 XM56_05130 XM56_05130 XM56_05130 1175133 1178582 + hypothetical protein gene gene1026 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05130 XM56_05135 XM56_05135 XM56_05135 1178689 1178844 - hypothetical protein gene gene1027 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05135 XM56_05140 XM56_05140 XM56_05140 1179117 1179653 - prephenate dehydrogenase gene gene1028 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05140 XM56_05145 XM56_05145 XM56_05145 1179830 1180210 + hypothetical protein gene gene1029 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05145 XM56_05150 XM56_05150 XM56_05150 1180426 1180989 + adenine phosphoribosyltransferase catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis gene gene1030 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05150 XM56_05155 XM56_05155 XM56_05155 1181073 1183043 + DNA polymerase III subunits gamma and tau catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand%3B the tau chain serves as a scaffold to help in the dimerizaton of the alpha%2Cepsilon and theta core complex%3B the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA gene gene1031 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05155 XM56_05160 XM56_05160 XM56_05160 1183099 1183431 + hypothetical protein gene gene1032 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05160 XM56_05165 XM56_05165 recR recR 1183431 1184036 + recombination protein RecR involved in a recombinational process of DNA repair%2C independent of the recBC complex gene gene1033 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05165 XM56_05170 XM56_05170 XM56_05170 1184375 1186243 + heat shock protein 90 molecular chaperone gene gene1034 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05170 XM56_05175 XM56_05175 adk adk 1186469 1187113 + adenylate kinase essential enzyme that recycles AMP in active cells%3B converts ATP and AMP to two molecules of ADP gene gene1035 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05175 XM56_05180 XM56_05180 XM56_05180 1187229 1188212 + ferrochelatase gene gene1036 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05180 XM56_05185 XM56_05185 XM56_05185 1188563 1189819 + histidine kinase gene gene1037 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05185 XM56_05190 XM56_05190 XM56_05190 1189812 1190768 + WbcK protein gene gene1038 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05190 XM56_05195 XM56_05195 XM56_05195 1190770 1191648 + glycosyl transferase family 2 gene gene1039 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05195 XM56_05200 XM56_05200 XM56_05200 1191657 1192733 + glycosyltransferase gene gene1040 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05200 XM56_05205 XM56_05205 XM56_05205 1192855 1193958 + glycosyltransferase gene gene1041 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05205 XM56_05210 XM56_05210 XM56_05210 1194036 1195061 + glycosyl transferase gene gene1042 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05210 XM56_05215 XM56_05215 XM56_05215 1195623 1197059 + protein-PII uridylyltransferase gene gene1043 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05215 XM56_05220 XM56_05220 XM56_05220 1197114 1198130 + glycosyl transferase gene gene1044 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05220 XM56_05225 XM56_05225 XM56_05225 1198168 1199178 + UDP-glucose 4-epimerase gene gene1045 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05225 XM56_05230 XM56_05230 XM56_05230 1199241 1200545 + guanosine kinase catalyzes the formation of inosine/guanosine monophosphate from inosine or guanosine and ATP gene gene1046 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05230 XM56_05235 XM56_05235 XM56_05235 1200764 1202455 - cation:proton antiport protein YbaL%3B member of the CPA-2 family of antiporters%3B uncharacterized protein gene gene1047 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05235 XM56_05240 XM56_05240 XM56_05240 1202893 1204125 - Fosmidomycin resistance protein gene gene1048 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05240 XM56_05245 XM56_05245 ushA ushA 1204392 1206044 + 5'-nucleotidase catalyzes the degradation of periplasmic UDP-glucose to uridine%2C glucose-1-phosphate and inorganic phosphate%3B specific for uridine nucleotides gene gene1049 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05245 XM56_05250 XM56_05250 XM56_05250 1206281 1206547 + hypothetical protein gene gene1050 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05250 XM56_05255 XM56_05255 XM56_05255 1206598 1207077 - hypothetical protein gene gene1051 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05255 XM56_05260 XM56_05260 XM56_05260 1207351 1208160 - conjugal transfer protein TraB gene gene1052 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05260 XM56_05265 XM56_05265 copA copA 1208242 1210998 - copper-transporting ATPase gene gene1053 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05265 XM56_05270 XM56_05270 XM56_05270 1211195 1211614 + MerR family transcriptional regulator gene gene1054 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05270 XM56_05275 XM56_05275 XM56_05275 1211660 1212109 - membrane protein gene gene1055 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05275 XM56_05280 XM56_05280 XM56_05280 1212112 1213026 - protease gene gene1056 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05280 XM56_05285 XM56_05285 XM56_05285 1213223 1214092 - hypothetical protein gene gene1057 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05285 XM56_05290 XM56_05290 XM56_05290 1214289 1215065 - oxidoreductase gene gene1058 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05290 XM56_05295 XM56_05295 XM56_05295 1215111 1215746 - acyl-CoA thioesterase gene gene1059 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05295 XM56_05300 XM56_05300 XM56_05300 1215717 1216403 + ABC transporter ATP-binding protein gene gene1060 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05300 XM56_05305 XM56_05305 XM56_05305 1216400 1218826 + sugar ABC transporter permease gene gene1061 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05305 XM56_05310 XM56_05310 XM56_05310 1218966 1220030 - phosphoribosylaminoimidazole carboxylase gene gene1062 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05310 XM56_05315 XM56_05315 purE purE 1220027 1220551 - N5-carboxyaminoimidazole ribonucleotide mutase catalyzes the formation of 4-carboxy-5-aminoimidazole ribonucleotide from N5-carboxyaminoimidazole ribonucleotide gene gene1063 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05315 XM56_05320 XM56_05320 XM56_05320 1220727 1221449 - UDP-2%2C3-diacylglucosamine hydrolase catalyzes the formation of 2%2C3%3Ddiacylglucosamine 1-phosphate from UDP-2%2C3%3Ddiacylglucosamine gene gene1064 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05320 XM56_05325 XM56_05325 XM56_05325 1221460 1221954 - peptidylprolyl isomerase gene gene1065 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05325 XM56_05330 XM56_05330 cysS cysS 1222167 1223552 + cysteine--tRNA ligase catalyzes a two-step reaction%3B charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA gene gene1066 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05330 XM56_05335 XM56_05335 XM56_05335 1223721 1223933 - ribosome-associated protein gene gene1067 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05335 XM56_05340 XM56_05340 XM56_05340 1223948 1224814 - methenyltetrahydrofolate cyclohydrolase gene gene1068 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05340 XM56_05345 XM56_05345 XM56_05345 1225028 1225104 + tRNA-Arg tRNA gene1069 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05345 XM56_05350 XM56_05350 integrase integrase 1225137 1226069 - disrupted pseudogene gene1070 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05350 XM56_05355 XM56_05355 XM56_05355 1226120 1226845 - ATPase gene gene1071 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05355 XM56_05360 XM56_05360 XM56_05360 1226832 1228340 - transposase gene gene1072 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05360 XM56_05365 XM56_05365 XM56_05365 1228380 1228649 - hypothetical protein gene gene1073 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05365 XM56_05370 XM56_05370 XM56_05370 1228692 1229381 - transcriptional regulator response regulator in two-component regulatory system with CusS%3B regulates the copper efflux system gene gene1074 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05370 XM56_05375 XM56_05375 XM56_05375 1229608 1230657 + alpha/beta hydrolase gene gene1075 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05375 XM56_05380 XM56_05380 XM56_05380 1230787 1231836 + transposase gene gene1076 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05380 XM56_05385 XM56_05385 XM56_05385 1232370 1232561 - LysR family transcriptional regulator gene gene1077 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05385 XM56_05390 XM56_05390 XM56_05390 1232603 1233724 + 50S ribosomal protein L16 arginine hydroxylase gene gene1078 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05390 XM56_05395 XM56_05395 XM56_05395 1234182 1235777 + histidine ammonia-lyase gene gene1079 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05395 XM56_05400 XM56_05400 XM56_05400 1235807 1237282 + lyase gene gene1080 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05400 XM56_05405 XM56_05405 XM56_05405 1237794 1239566 + metal ABC transporter permease gene gene1081 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05405 XM56_05410 XM56_05410 XM56_05410 1239584 1239871 - antibiotic biosynthesis monooxygenase gene gene1082 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05410 XM56_05415 XM56_05415 XM56_05415 1240211 1240405 + glycogen synthase gene gene1083 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05415 XM56_05420 XM56_05420 XM56_05420 1240657 1241301 + serine/threonine protein phosphatase gene gene1084 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05420 XM56_05425 XM56_05425 XM56_05425 1241452 1242417 - membrane protein gene gene1085 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05425 XM56_05430 XM56_05430 XM56_05430 1242791 1243381 + LuxR family transcriptional regulator gene gene1086 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05430 XM56_05435 XM56_05435 XM56_05435 1243568 1244047 - cold-shock protein gene gene1087 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05435 XM56_05440 XM56_05440 XM56_05440 1244314 1244523 + cold-shock protein gene gene1088 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05440 XM56_05445 XM56_05445 XM56_05445 1244823 1245206 - camphor resistance protein CrcB camphor resistance protein CrcB%3B may be involved in chromosome condensation%3B overexpression in Escherichia coli protects against decondensation by camphor%3B overexpressing the protein results in an increase in supercoiling gene gene1089 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05445 XM56_05450 XM56_05450 adrA adrA 1245254 1246156 - diguanylate cyclase catalyzes the conversion of 2 GTP into c-di-GMP%3B adrA overexpression induces cellulose biosynthesis%2C cell adherence to abiotic surfaces and swimming and swarming motility%3B AdrA acts post-transcriptionally on the bcsABZC operon activating cellulose biosynthesis gene gene1090 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05450 XM56_05455 XM56_05455 XM56_05455 1246510 1246725 + preprotein translocase subunit TatA gene gene1091 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05455 XM56_05460 XM56_05460 XM56_05460 1246856 1247821 - lipoyl synthase catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group gene gene1092 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05460 XM56_05465 XM56_05465 XM56_05465 1248037 1248720 - lipoate--protein ligase lipoyl/octanoyltransferase%3B catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein gene gene1093 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05465 XM56_05470 XM56_05470 XM56_05470 1248878 1249141 - hypothetical protein gene gene1094 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05470 XM56_05475 XM56_05475 XM56_05475 1249290 1250501 - D-alanyl-D-alanine carboxypeptidase penicillin-binding protein 5%3B removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors gene gene1095 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05475 XM56_05480 XM56_05480 XM56_05480 1250715 1251812 - rare lipoprotein A septal ring protein%2C suppressor of prc%2C minor lipoprotein gene gene1096 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05480 XM56_05485 XM56_05485 XM56_05485 1251822 1252934 - cell wall shape-determining protein gene gene1097 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05485 XM56_05490 XM56_05490 XM56_05490 1252971 1254866 - penicillin-binding protein 2 gene gene1098 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05490 XM56_05495 XM56_05495 XM56_05495 1254941 1255411 - 50S rRNA methyltransferase gene gene1099 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05495 XM56_05500 XM56_05500 XM56_05500 1255415 1255732 - ribosome-associated protein gene gene1100 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05500 XM56_05505 XM56_05505 XM56_05505 1256214 1256882 - nicotinate-nucleotide adenylyltransferase gene gene1101 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05505 XM56_05510 XM56_05510 holA holA 1256872 1257906 - DNA polymerase III subunit delta required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA gene gene1102 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05510 XM56_05515 XM56_05515 XM56_05515 1257903 1258526 - LPS biosynthesis protein rare lipoprotein B%3B involved in the assembly of LPS in the outer membrane gene gene1103 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05515 XM56_05520 XM56_05520 leuS leuS 1258541 1261123 - leucine--tRNA ligase leucine--tRNA ligase%3B LeuRS%3B class-I aminoacyl-tRNA synthetase%3B charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA%3B due to the large number of codons that tRNA(Leu) recognizes%2C the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA%2C but instead recognition is dependent on a conserved discriminator base A37 and a long arm%3B an editing domain hydrolyzes misformed products%3B in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase gene gene1104 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05520 XM56_05525 XM56_05525 XM56_05525 1261472 1261954 + hypothetical protein gene gene1105 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05525 XM56_05530 XM56_05530 artP artP 1262008 1262733 - arginine transporter ATP-binding subunit With ArtMQJI transports arginine across the inner membrane gene gene1106 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05530 XM56_05535 XM56_05535 XM56_05535 1262733 1263407 - amino acid ABC transporter permease gene gene1107 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05535 XM56_05540 XM56_05540 XM56_05540 1263407 1264147 - amino acid ABC transporter permease with GltIKL is involved in the transport of glutamate and aspartate gene gene1108 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05540 XM56_05545 XM56_05545 XM56_05545 1264449 1265363 - amino acid transporter gene gene1109 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05545 XM56_05550 XM56_05550 XM56_05550 1265949 1266533 - pyridoxamine 5-phosphate oxidase gene gene1110 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05550 XM56_05555 XM56_05555 lnt lnt 1266542 1268119 - apolipoprotein acyltransferase Transfers the fatty acyl group on membrane lipoproteins gene gene1111 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05555 XM56_05560 XM56_05560 XM56_05560 1268127 1269005 - magnesium/cobalt efflux protein CorC involved in the transport of magnesium and cobalt ions gene gene1112 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05560 XM56_05565 XM56_05565 XM56_05565 1269319 1269792 - metal-binding heat shock protein gene gene1113 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05565 XM56_05570 XM56_05570 XM56_05570 1269789 1270844 - nucleoside triphosphate hydrolase gene gene1114 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05570 XM56_05575 XM56_05575 XM56_05575 1271160 1272584 - (dimethylallyl)adenosine tRNA methylthiotransferase catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A) gene gene1115 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05575 XM56_05580 XM56_05580 ubiF ubiF 1272827 1274008 + 2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol hydroxylase catalyzes the formation of 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1%2C4-benzoquinol from 2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol%3B functions in the biosynthesis of ubiquinone or coenzyme Q gene gene1116 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05580 XM56_05585 XM56_05585 XM56_05585 1274182 1274256 - tRNA-Gln tRNA gene1117 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05585 XM56_05590 XM56_05590 XM56_05590 1274262 1274338 - tRNA-Met tRNA gene1118 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05590 XM56_05595 XM56_05595 asnB asnB 1274591 1276255 - asparagine synthetase B functions in asparagine biosynthesis%3B converts glutamine%2C aspartate%2C ATP%2C and water to glutamate%2C asparagine%2C pyrophosphate and AMP gene gene1119 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05595 XM56_05600 XM56_05600 XM56_05600 1276724 1277476 - UMP phosphatase gene gene1120 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05600 XM56_05605 XM56_05605 XM56_05605 1277687 1278907 - transcriptional regulator regulates the synthesis of glucosamine and N-acetylglucosamine by acting as a repressor of the nagEBACD operon and both a repressor and activator of the glmSU operon gene gene1121 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05605 XM56_05610 XM56_05610 nagA nagA 1278924 1280069 - N-acetylglucosamine-6-phosphate deacetylase catalyzes the formation of glucosamine 6-phosphate from N-acetylglucosamine 6-phosphate gene gene1122 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05610 XM56_05615 XM56_05615 nagB nagB 1280089 1280889 - glucosamine-6-phosphate deaminase catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate gene gene1123 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05615 XM56_05620 XM56_05620 XM56_05620 1281242 1283275 + PTS N-acetyl glucosamine transporter subunits IIABC phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel gene gene1124 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05620 XM56_05625 XM56_05625 XM56_05625 1283468 1285135 + glutamate--tRNA ligase catalyzes a two-step reaction%2C first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA gene gene1125 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05625 XM56_05630 XM56_05630 chiP chiP 1285772 1287175 + chitoporin outer membrane porin involved in the transport of chitooligosaccharides gene gene1126 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05630 XM56_05635 XM56_05635 XM56_05635 1287236 1287562 + hypothetical protein gene gene1127 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05635 XM56_05640 XM56_05640 beta-N-acetylhexosaminidase beta-N-acetylhexosaminidase 1287640 1290316 + disrupted pseudogene gene1128 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05640 XM56_05645 XM56_05645 fur fur 1290592 1291038 - ferric uptake regulator negatively regulates a number of operons that encode enzymes involved in iron transport%3B activated by manganese%3B forms a homodimer gene gene1129 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05645 XM56_05650 XM56_05650 XM56_05650 1291407 1291934 - flavodoxin FldA An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group gene gene1130 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05650 XM56_05655 XM56_05655 XM56_05655 1292157 1293815 + chemotaxis protein gene gene1131 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05655 XM56_05660 XM56_05660 XM56_05660 1293882 1294169 - LexA regulated protein gene gene1132 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05660 XM56_05665 XM56_05665 XM56_05665 1294513 1295307 - acyl-CoA esterase gene gene1133 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05665 XM56_05670 XM56_05670 XM56_05670 1295521 1296060 + replication initiation regulator SeqA negative modulator of the initiation of chromosome replication gene gene1134 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05670 XM56_05675 XM56_05675 XM56_05675 1296153 1297793 + phosphoglucomutase catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate gene gene1135 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05675 XM56_05680 XM56_05680 XM56_05680 1297876 1299321 - hemolysin gene gene1136 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05680 XM56_05685 XM56_05685 XM56_05685 1299609 1300037 - membrane protein gene gene1137 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05685 XM56_05690 XM56_05690 XM56_05690 1300166 1300855 - transcriptional regulator response regulator in two-component regulatory system with KdpD%3B regulates the kdp operon involved in potassium transport gene gene1138 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05690 XM56_05695 XM56_05695 XM56_05695 1300852 1303551 - sensor protein KdpD sensory histidine kinase in two-component regulatory system with KdpE%3B signal sensing protein gene gene1139 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05695 XM56_05700 XM56_05700 XM56_05700 1303561 1304199 - potassium-transporting ATPase subunit C One of the components of the high-affinity ATP-driven potassium transport (or KDP)system%2C which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions. The C subunit may be involved in assembly of the KDP complex gene gene1140 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05700 XM56_05705 XM56_05705 XM56_05705 1304281 1306347 - potassium-transporting ATPase subunit B One of the components of the high-affinity ATP-driven potassium transport (or KDP) system%2C which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions gene gene1141 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05705 XM56_05710 XM56_05710 XM56_05710 1306578 1308266 - potassium-transporting ATPase subunit A catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions gene gene1142 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05710 XM56_05715 XM56_05715 kdpF kdpF 1308267 1308356 - potassium-transporting ATPase subunit F one of the components of the high-affinity ATP-driven potassium transport (or KDP) system%2C which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions gene gene1143 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05715 XM56_05720 XM56_05720 XM56_05720 1308855 1309061 + membrane protein gene gene1144 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05720 XM56_05725 XM56_05725 XM56_05725 1309320 1309646 + peptide chain release factor 1 gene gene1145 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05725 XM56_05730 XM56_05730 XM56_05730 1309728 1310135 + lysine acyltransferase gene gene1146 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05730 XM56_05735 XM56_05735 XM56_05735 1310153 1319908 + peptidase C80 gene gene1147 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05735 XM56_05740 XM56_05740 XM56_05740 1320055 1320531 + hypothetical protein gene gene1148 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05740 XM56_05745 XM56_05745 XM56_05745 1320535 1321980 + deoxyribodipyrimidine photolyase UV-induced DNA repair%3B converts cyclobutane-type pyrimidine dimers created during exposure to UV ratiation to monomers%3B light dependent gene gene1149 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05745 XM56_05750 XM56_05750 XM56_05750 1321996 1323051 + 3'%2C5'-cyclic-nucleotide phosphodiesterase gene gene1150 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05750 XM56_05755 XM56_05755 XM56_05755 1323227 1323970 + metal-binding protein gene gene1151 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05755 XM56_05760 XM56_05760 XM56_05760 1324390 1325046 + hypothetical protein gene gene1152 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05760 XM56_05765 XM56_05765 XM56_05765 1325040 1326005 + hypothetical protein gene gene1153 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05765 XM56_05770 XM56_05770 XM56_05770 1326002 1326739 + LamB/YcsF family protein gene gene1154 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05770 XM56_05775 XM56_05775 XM56_05775 1326830 1327561 + membrane protein gene gene1155 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05775 XM56_05780 XM56_05780 XM56_05780 1327558 1328577 + membrane protein gene gene1156 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05780 XM56_05785 XM56_05785 XM56_05785 1328586 1329233 + pyrrolidone-carboxylate peptidase gene gene1157 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05785 XM56_05790 XM56_05790 gltA gltA 1329299 1330579 - type II citrate synthase type II enzyme%3B in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate%3B allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation%3B forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A%3B functions in TCA cycle%2C glyoxylate cycle and respiration%3B enzyme from Helicobacter pylori is not inhibited by NADH gene gene1158 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05790 XM56_05795 XM56_05795 XM56_05795 1331228 1331617 + succinate dehydrogenase gene gene1159 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05795 XM56_05800 XM56_05800 sdhD sdhD 1331611 1331958 + succinate dehydrogenase gene gene1160 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05800 XM56_05805 XM56_05805 sdhA sdhA 1331959 1333725 + succinate dehydrogenase part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers)%3B SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556%3B SdhC binds ubiquinone%3B oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol gene gene1161 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05805 XM56_05810 XM56_05810 sdhB sdhB 1333779 1334495 + succinate dehydrogenase part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers)%3B SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556%3B SdhC binds ubiquinone%3B oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol%3B the catalytic subunits are similar to fumarate reductase gene gene1162 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05810 XM56_05815 XM56_05815 XM56_05815 1334769 1337576 + 2-oxoglutarate dehydrogenase gene gene1163 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05815 XM56_05820 XM56_05820 XM56_05820 1337605 1338816 + dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex%3B catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA gene gene1164 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05820 XM56_05825 XM56_05825 sucC sucC 1338930 1340096 + succinyl-CoA synthetase subunit beta catalyzes the interconversion of succinyl-CoA and succinate gene gene1165 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05825 XM56_05830 XM56_05830 XM56_05830 1340096 1340974 + succinyl-CoA synthetase subunit alpha Catalyzes the only substrate-level phosphorylation in the TCA cycle gene gene1166 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05830 XM56_05835 XM56_05835 XM56_05835 1341398 1342447 - transposase gene gene1167 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05835 XM56_05840 XM56_05840 XM56_05840 1342570 1344468 - 2'%2C 3'-cyclic nucleotide 2'-phosphodiesterase gene gene1168 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05840 XM56_05845 XM56_05845 XM56_05845 1345069 1346637 + cytochrome d terminal oxidase subunit 1 part of the aerobic respiratory chain%3B catalyzes the ubiquinol to ubiquinone gene gene1169 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05845 XM56_05850 XM56_05850 XM56_05850 1346652 1347791 + cytochrome d ubiquinol oxidase subunit 2 gene gene1170 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05850 XM56_05855 XM56_05855 XM56_05855 1347804 1347941 + cytochrome bd biosynthesis protein gene gene1171 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05855 XM56_05860 XM56_05860 XM56_05860 1347916 1348215 + hypothetical protein gene gene1172 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05860 XM56_05865 XM56_05865 XM56_05865 1348343 1348744 + acyl-CoA thioesterase catalyzes the hydrolysis of short chain aliphatic acyl-CoA thioesters%3B physiological role remains unknown%3B involved in phospholipid metabolism%3B part of the Tol/Pal system of proteins that are critical for maintaining the integrity of the cell envelope components gene gene1173 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05865 XM56_05870 XM56_05870 XM56_05870 1348744 1349430 + colicin uptake protein TolQ membrane spanning protein in TolA-TolQ-TolR complex%3B involved in the tonB-independent uptake of group A colicins gene gene1174 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05870 XM56_05875 XM56_05875 XM56_05875 1349443 1349871 + colicin uptake protein TolR membrane spanning protein in TolA-TolQ-TolR complex%3B involved in the tonB-independent uptake of group A colicins gene gene1175 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05875 XM56_05880 XM56_05880 XM56_05880 1349983 1351128 + membrane protein gene gene1176 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05880 XM56_05885 XM56_05885 tolB tolB 1351248 1352540 + translocation protein TolB forms dimers%3B may be involved in cell envelope integrity%3B interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA gene gene1177 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05885 XM56_05890 XM56_05890 XM56_05890 1352589 1353095 + peptidoglycan-associated outer membrane lipoprotein gene gene1178 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05890 XM56_05895 XM56_05895 XM56_05895 1353105 1353914 + tol-pal system protein periplasmic protein that interacts with TolA%3B the tol-pal system is probably involved in maintaining cell envelope integrity gene gene1179 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05895 XM56_05900 XM56_05900 XM56_05900 1354107 1354182 + tRNA-Lys tRNA gene1180 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05900 XM56_05905 XM56_05905 XM56_05905 1354221 1354478 - hypothetical protein gene gene1181 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05905 XM56_05910 XM56_05910 XM56_05910 1354702 1355763 + quinolinate synthetase 3 different subfamilies%3B catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate gene gene1182 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05910 XM56_05915 XM56_05915 XM56_05915 1356019 1356747 + nicotinamide riboside transporter PnuC involved in nicotinamide riboside transport gene gene1183 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05915 XM56_05920 XM56_05920 XM56_05920 1356823 1357755 - zinc transporter ZitB involved in zinc efflux across the cytoplasmic membrane gene gene1184 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05920 XM56_05925 XM56_05925 XM56_05925 1358001 1359053 + phospho-2-dehydro-3-deoxyheptonate aldolase catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate%2C phenylalanine sensitive gene gene1185 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05925 XM56_05930 XM56_05930 gpmA gpmA 1359295 1360047 - phosphoglyceromutase 2%2C3-bisphosphoglycerate-dependent%3B catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate gene gene1186 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05930 XM56_05935 XM56_05935 XM56_05935 1360254 1361105 - endonuclease gene gene1187 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05935 XM56_05940 XM56_05940 XM56_05940 1361317 1361628 - hypothetical protein gene gene1188 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05940 XM56_05945 XM56_05945 XM56_05945 1362241 1364181 - peptidase S8 gene gene1189 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05945 XM56_05950 XM56_05950 XM56_05950 1364485 1364820 - phosphate-starvation-inducible protein PsiF gene gene1190 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05950 XM56_05955 XM56_05955 galM galM 1364995 1366059 - galactose-1-epimerase mutarotase%3B catalyzes the conversion of beta-galactose to the alpha-anomer%3B links the metabolism of lactose and galactose gene gene1191 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05955 XM56_05960 XM56_05960 XM56_05960 1366053 1367204 - galactokinase catalyzes the formation of alpha-D-galactose 1-phosphate from D-galactose in galactose metabolism gene gene1192 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05960 XM56_05965 XM56_05965 XM56_05965 1367204 1368310 - galactose-1-phosphate uridylyltransferase catalyzes the interconversion of UDP-galactose and galactose-1-P with UDP-galactose and glucose-1-P gene gene1193 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05965 XM56_05970 XM56_05970 XM56_05970 1368320 1369336 - UDP-galactose-4-epimerase gene gene1194 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05970 XM56_05975 XM56_05975 XM56_05975 1369634 1370452 - CAAX protease gene gene1195 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05975 XM56_05980 XM56_05980 XM56_05980 1370648 1372141 - molybdenum ABC transporter ATP-binding protein contains 2 ATP-binding cassettes%3B involved in the transport of molybdenum gene gene1196 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05980 XM56_05985 XM56_05985 XM56_05985 1372250 1373041 - transcriptional regulator represses the modABCD operon and activates the moaABCD and napFDAGHBC operons gene gene1197 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05985 XM56_05990 XM56_05990 XM56_05990 1373276 1373416 + membrane protein gene gene1198 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05990 XM56_05995 XM56_05995 modA modA 1373633 1374409 + molybdate transporter with ModCB is involved in the high-affinity transport of molybdate gene gene1199 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_05995 XM56_06000 XM56_06000 XM56_06000 1374585 1375778 + integrase gene gene1200 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06000 XM56_06005 XM56_06005 XM56_06005 1375744 1375944 - hypothetical protein gene gene1201 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06005 XM56_06010 XM56_06010 XM56_06010 1375941 1377341 - hypothetical protein gene gene1202 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06010 XM56_06015 XM56_06015 XM56_06015 1377385 1377879 + hypothetical protein gene gene1203 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06015 XM56_06020 XM56_06020 XM56_06020 1377881 1378153 - nuclease gene gene1204 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06020 XM56_06025 XM56_06025 XM56_06025 1378143 1378367 - hypothetical protein gene gene1205 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06025 XM56_06030 XM56_06030 XM56_06030 1378372 1380471 - DNA polymerase I gene gene1206 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06030 XM56_06035 XM56_06035 XM56_06035 1380568 1381347 - hypothetical protein gene gene1207 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06035 XM56_06040 XM56_06040 XM56_06040 1381404 1381781 - hypothetical protein gene gene1208 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06040 XM56_06045 XM56_06045 XM56_06045 1381837 1382385 - hypothetical protein gene gene1209 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06045 XM56_06050 XM56_06050 XM56_06050 1382398 1383708 - hypothetical protein gene gene1210 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06050 XM56_06055 XM56_06055 XM56_06055 1383711 1384445 - hypothetical protein gene gene1211 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06055 XM56_06060 XM56_06060 XM56_06060 1384957 1385634 - phage repressor protein gene gene1212 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06060 XM56_06065 XM56_06065 XM56_06065 1385775 1385975 + hypothetical protein gene gene1213 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06065 XM56_06070 XM56_06070 XM56_06070 1385979 1388144 + replication protein gene gene1214 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06070 XM56_06075 XM56_06075 XM56_06075 1388472 1388711 + hypothetical protein gene gene1215 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06075 XM56_06080 XM56_06080 hypothetical protein hypothetical protein 1389164 1389397 + disrupted pseudogene gene1216 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06080 XM56_06085 XM56_06085 XM56_06085 1389408 1389626 + hypothetical protein gene gene1217 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06085 XM56_06090 XM56_06090 XM56_06090 1389629 1391233 + bacteriophage head to tail connecting protein gene gene1218 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06090 XM56_06095 XM56_06095 XM56_06095 1391230 1391469 + hypothetical protein gene gene1219 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06095 XM56_06100 XM56_06100 XM56_06100 1391456 1392259 + hypothetical protein gene gene1220 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06100 XM56_06105 XM56_06105 XM56_06105 1392473 1393381 + hypothetical protein gene gene1221 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06105 XM56_06110 XM56_06110 XM56_06110 1393436 1393996 + hypothetical protein gene gene1222 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06110 XM56_06115 XM56_06115 XM56_06115 1393996 1395969 + hypothetical protein gene gene1223 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06115 XM56_06120 XM56_06120 XM56_06120 1395975 1396421 + acetyltransferase gene gene1224 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06120 XM56_06125 XM56_06125 XM56_06125 1396425 1396907 + hypothetical protein gene gene1225 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06125 XM56_06130 XM56_06130 XM56_06130 1396904 1399030 + hypothetical protein gene gene1226 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06130 XM56_06135 XM56_06135 XM56_06135 1399036 1400328 + hypothetical protein gene gene1227 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06135 XM56_06140 XM56_06140 XM56_06140 1400325 1402850 + hypothetical protein gene gene1228 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06140 XM56_06145 XM56_06145 XM56_06145 1402852 1403199 - hypothetical protein gene gene1229 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06145 XM56_06150 XM56_06150 XM56_06150 1403271 1403894 - hypothetical protein gene gene1230 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06150 XM56_06155 XM56_06155 XM56_06155 1404023 1404373 + hypothetical protein gene gene1231 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06155 XM56_06160 XM56_06160 transcriptional regulator transcriptional regulator 1404370 1405979 + disrupted pseudogene gene1232 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06160 XM56_06165 XM56_06165 XM56_06165 1405992 1407389 + hypothetical protein gene gene1233 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06165 XM56_06170 XM56_06170 XM56_06170 1407400 1407867 + hypothetical protein gene gene1234 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06170 XM56_06175 XM56_06175 XM56_06175 1407979 1408284 + hypothetical protein gene gene1235 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06175 XM56_06180 XM56_06180 XM56_06180 1408271 1408801 + lysozyme gene gene1236 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06180 XM56_06185 XM56_06185 XM56_06185 1408821 1409294 + hypothetical protein gene gene1237 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06185 XM56_06190 XM56_06190 modB modB 1409434 1410132 + molybdate ABC transporter permease part of ModCBA molybdate transporter%3B member of ABC superfamily%3B inner membrane component%3B regulated by repressor protein ModE gene gene1238 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06190 XM56_06195 XM56_06195 modC modC 1410126 1411190 + molybdate transporter ATP-binding protein Part of the ABC transporter complex modABC involved in molybdenum import gene gene1239 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06195 XM56_06200 XM56_06200 XM56_06200 1411433 1412254 - pyridoxal phosphate phosphatase gene gene1240 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06200 XM56_06205 XM56_06205 XM56_06205 1412668 1413669 + 6-phosphogluconolactonase catalyzes the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate gene gene1241 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06205 XM56_06210 XM56_06210 XM56_06210 1413787 1415064 - adenosylmethionine-8-amino-7-oxononanoate aminotransferase catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7%2C8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate gene gene1242 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06210 XM56_06215 XM56_06215 XM56_06215 1415164 1416216 + biotin synthase catalyzes the formation of biotin from dethiobiotin gene gene1243 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06215 XM56_06220 XM56_06220 XM56_06220 1416216 1417367 + 8-amino-7-oxononanoate synthase catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine gene gene1244 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06220 XM56_06225 XM56_06225 XM56_06225 1417351 1418163 + biotin biosynthesis protein BioC methyltransferase%3B acyl carrier protein involved in an unidentified step in the synthesis of pimeloyl-CoA%2C a biotin precursor%3B member of the bio operon (bioABFCD)%3B in Escherichia coli%2C bioC-null mutants require biotin for growth gene gene1245 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06225 XM56_06230 XM56_06230 XM56_06230 1418156 1418869 + dethiobiotin synthetase gene gene1246 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06230 XM56_06235 XM56_06235 XM56_06235 1418981 1419688 - branched-chain amino acid ABC transporter ATP-binding protein gene gene1247 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06235 XM56_06240 XM56_06240 XM56_06240 1420653 1422665 + excinuclease ABC subunit B The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands%2C where it probes for the presence of a lesion gene gene1248 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06240 XM56_06245 XM56_06245 XM56_06245 1422734 1422982 + transporter gene gene1249 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06245 XM56_06250 XM56_06250 XM56_06250 1422997 1423920 - hypothetical protein gene gene1250 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06250 XM56_06255 XM56_06255 moaA moaA 1424373 1425353 + molybdenum cofactor biosynthesis protein A together with moaC%2C is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z gene gene1251 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06255 XM56_06260 XM56_06260 moaC moaC 1425385 1425864 + molybdenum cofactor biosynthesis protein MoaC MoaC%3B along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z%3B involved in molybdenum cofactor biosynthesis gene gene1252 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06260 XM56_06265 XM56_06265 moaD moaD 1425861 1426106 + molybdopterin synthase small subunit catalyzes the conversion of molybdopterin precursor Z into molybdopterin gene gene1253 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06265 XM56_06270 XM56_06270 XM56_06270 1426109 1426561 + hypothetical protein gene gene1254 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06270 XM56_06275 XM56_06275 XM56_06275 1426705 1427415 + membrane protein gene gene1255 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06275 XM56_06280 XM56_06280 XM56_06280 1427669 1428775 - membrane protein gene gene1256 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06280 XM56_06285 XM56_06285 XM56_06285 1428809 1429999 - membrane protein gene gene1257 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06285 XM56_06290 XM56_06290 XM56_06290 1429996 1431747 - multidrug ABC transporter ATP-binding protein gene gene1258 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06290 XM56_06295 XM56_06295 XM56_06295 1431761 1432747 - membrane protein gene gene1259 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06295 XM56_06300 XM56_06300 XM56_06300 1432796 1433506 - transcriptional regulator gene gene1260 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06300 XM56_06305 XM56_06305 XM56_06305 1433909 1435264 + ATP-dependent RNA helicase RhlE this helicase is not essential cell growth gene gene1261 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06305 XM56_06310 XM56_06310 XM56_06310 1435433 1436365 + tRNA-dihydrouridine synthase C gene gene1262 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06310 XM56_06315 XM56_06315 XM56_06315 1436451 1437083 - hypothetical protein gene gene1263 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06315 XM56_06320 XM56_06320 XM56_06320 1437608 1438639 + magnesium transporter gene gene1264 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06320 XM56_06325 XM56_06325 XM56_06325 1438696 1438872 - membrane protein gene gene1265 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06325 XM56_06330 XM56_06330 pbpG pbpG 1439265 1440200 + D-alanyl-D-alanine endopeptidase specifically hydrolyze the DD-diaminopimelate-alanine bonds in high-molecular-mass murein sacculi%3B Penicillin-binding protein 7 gene gene1266 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06330 XM56_06335 XM56_06335 XM56_06335 1440548 1442260 - lactate dehydrogenase component of the membrane-bound D-lactate oxidase%2C FAD-binding%2C NADH independent gene gene1267 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06335 XM56_06340 XM56_06340 XM56_06340 1442461 1443000 + adenylate cyclase gene gene1268 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06340 XM56_06345 XM56_06345 XM56_06345 1443064 1443405 - hypothetical protein gene gene1269 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06345 XM56_06350 XM56_06350 XM56_06350 1443781 1444884 + Suppressor of fused protein (SUFU) gene gene1270 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06350 XM56_06355 XM56_06355 XM56_06355 1445039 1445287 + hypothetical protein gene gene1271 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06355 XM56_06360 XM56_06360 XM56_06360 1445486 1446322 + phosphonate ABC transporter ATP-binding protein gene gene1272 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06360 XM56_06365 XM56_06365 XM56_06365 1446359 1447288 + phosphonate ABC transporter substrate-binding protein gene gene1273 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06365 XM56_06370 XM56_06370 XM56_06370 1447357 1448229 + phosphonate ABC transporter permease gene gene1274 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06370 XM56_06375 XM56_06375 XM56_06375 1448219 1449124 + phosphonate ABC transporter permease gene gene1275 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06375 XM56_06380 XM56_06380 XM56_06380 1449376 1449846 + hypothetical protein gene gene1276 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06380 XM56_06385 XM56_06385 XM56_06385 1450189 1451457 + branched-chain amino acid ABC transporter substrate-binding protein gene gene1277 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06385 XM56_06390 XM56_06390 XM56_06390 1451533 1453134 + urea ABC transporter permease gene gene1278 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06390 XM56_06395 XM56_06395 XM56_06395 1453134 1454210 + amino acid ABC transporter permease gene gene1279 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06395 XM56_06400 XM56_06400 XM56_06400 1454207 1455043 + urea ABC transporter ATP-binding protein gene gene1280 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06400 XM56_06405 XM56_06405 XM56_06405 1455164 1455862 + urea ABC transporter ATP-binding protein gene gene1281 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06405 XM56_06410 XM56_06410 sseA sseA 1455869 1456723 - 3-mercaptopyruvate sulfurtransferase catalyzes the transfer of a sulfur ion to cyanide or to other thiol compounds gene gene1282 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06410 XM56_06415 XM56_06415 XM56_06415 1457114 1458244 + myo-inositol 2-dehydrogenase gene gene1283 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06415 XM56_06420 XM56_06420 XM56_06420 1458401 1459459 + fatty acid desaturase gene gene1284 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06420 XM56_06425 XM56_06425 XM56_06425 1459826 1460758 + ABC transporter gene gene1285 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06425 XM56_06430 XM56_06430 XM56_06430 1460867 1462021 + osmoprotectant uptake system permease gene gene1286 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06430 XM56_06435 XM56_06435 XM56_06435 1462018 1462962 + ATP-binding protein gene gene1287 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06435 XM56_06440 XM56_06440 XM56_06440 1462959 1463789 + osmoprotectant uptake system permease gene gene1288 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06440 XM56_06445 XM56_06445 XM56_06445 1463845 1464624 + phosphate ABC transporter substrate-binding protein gene gene1289 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06445 XM56_06450 XM56_06450 XM56_06450 1464888 1465634 - dehydrogenase gene gene1290 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06450 XM56_06455 XM56_06455 XM56_06455 1465744 1466658 + LysR family transcriptional regulator gene gene1291 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06455 XM56_06460 XM56_06460 XM56_06460 1466643 1466831 - hypothetical protein gene gene1292 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06460 XM56_06465 XM56_06465 XM56_06465 1466913 1467803 - multidrug DMT transporter gene gene1293 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06465 XM56_06470 XM56_06470 XM56_06470 1468084 1469394 + alginate lyase gene gene1294 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06470 XM56_06475 XM56_06475 XM56_06475 1469518 1470633 - membrane protein gene gene1295 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06475 XM56_06480 XM56_06480 dinG dinG 1471101 1473284 + ATP-dependent DNA helicase DinG helicase involved in DNA repair and perhaps also replication gene gene1296 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06480 XM56_06485 XM56_06485 XM56_06485 1473597 1474301 + porin porin involved in osmoregulation allowing water to move into and out of the cell in response to osmotic pressure gene gene1297 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06485 XM56_06490 XM56_06490 XM56_06490 1474509 1475489 + glycosyl transferase gene gene1298 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06490 XM56_06495 XM56_06495 XM56_06495 1475711 1477573 + peptidase M3 gene gene1299 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06495 XM56_06500 XM56_06500 XM56_06500 1477725 1477985 - membrane protein gene gene1300 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06500 XM56_06505 XM56_06505 XM56_06505 1478106 1478753 - Asp/Glu/hydantoin racemase gene gene1301 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06505 XM56_06510 XM56_06510 XM56_06510 1478880 1479887 + 23S rRNA methyltransferase gene gene1302 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06510 XM56_06515 XM56_06515 XM56_06515 1480442 1481746 + chemotaxis protein gene gene1303 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06515 XM56_06520 XM56_06520 glnQ glnQ 1481994 1482716 - glutamine ABC transporter ATP-binding protein similar to ATP-binding component of ABC transporters gene gene1304 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06520 XM56_06525 XM56_06525 glnP glnP 1482713 1483369 - glutamine ABC transporter permease similar to permease component of ABC transporters%3B mutations impair ability of Escherichia coli to transport and utilize glutamine gene gene1305 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06525 XM56_06530 XM56_06530 glnH glnH 1483436 1484179 - glutamine ABC transporter substrate-bindnig protein similar to periplasmic-binding component of ABC transporters gene gene1306 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06530 XM56_06535 XM56_06535 XM56_06535 1484566 1484832 - hypothetical protein gene gene1307 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06535 XM56_06540 XM56_06540 XM56_06540 1484901 1485404 - DNA starvation/stationary phase protection protein Dps binds DNA in a non-sequence-specific manner and is abundant during stationary phase%3B forms a DNA-protein crystal that protects DNA from damage%3B required for normal starvation response and long-term stationary viability%3B forms a homododecameric complex and sequesters iron which provides protection against oxidative damage gene gene1308 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06540 XM56_06545 XM56_06545 XM56_06545 1485716 1486492 - trans-aconitate methyltransferase catalyzes the formation of (E)-3-(methoxycarbonyl)pent-2-enedioate and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and trans-aconitate gene gene1309 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06545 XM56_06550 XM56_06550 XM56_06550 1486517 1487182 - hypothetical protein gene gene1310 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06550 XM56_06555 XM56_06555 XM56_06555 1487179 1487733 - RNA polymerase sigma factor gene gene1311 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06555 XM56_06560 XM56_06560 XM56_06560 1487794 1488354 - fasciclin gene gene1312 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06560 XM56_06565 XM56_06565 XM56_06565 1488532 1489023 - acetyltransferase gene gene1313 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06565 XM56_06570 XM56_06570 XM56_06570 1489037 1489924 - threonine transporter gene gene1314 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06570 XM56_06575 XM56_06575 XM56_06575 1489979 1490203 + hypothetical protein gene gene1315 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06575 XM56_06580 XM56_06580 ompX ompX 1490327 1490854 + membrane protein OmpX%3B involved in cell adhesion%3B forms an eight-stranded antiparallel beta-barrel that protrudes from the cell surface%3B mutations in the gene increase cell-surface contact in fimbriated strains but decrease contact in nonfimbriated strains gene gene1316 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06580 XM56_06585 XM56_06585 XM56_06585 1490976 1491668 - hydrolase gene gene1317 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06585 XM56_06590 XM56_06590 XM56_06590 1492164 1493102 + cytochrome C551 gene gene1318 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06590 XM56_06595 XM56_06595 XM56_06595 1493157 1494569 + xaa-Pro aminopeptidase gene gene1319 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06595 XM56_06600 XM56_06600 XM56_06600 1494773 1496344 + ABC transporter ATP-binding protein gene gene1320 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06600 XM56_06605 XM56_06605 XM56_06605 1496546 1497565 + transposase gene gene1321 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06605 XM56_06610 XM56_06610 XM56_06610 1497971 1498726 - molybdopterin-synthase adenylyltransferase gene gene1322 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06610 XM56_06615 XM56_06615 XM56_06615 1498763 1499998 - molybdopterin biosynthesis protein MoeA is involved in the formation of active molybdenum cofactor and the chelation of molybdenum gene gene1323 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06615 XM56_06620 XM56_06620 XM56_06620 1500199 1500738 + membrane protein gene gene1324 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06620 XM56_06625 XM56_06625 XM56_06625 1500846 1502156 - arylsulfatase gene gene1325 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06625 XM56_06630 XM56_06630 XM56_06630 1502171 1502830 - phosphonate ABC transporter ATP-binding protein gene gene1326 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06630 XM56_06635 XM56_06635 XM56_06635 1502832 1504094 - RND transporter gene gene1327 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06635 XM56_06640 XM56_06640 XM56_06640 1504103 1506511 - membrane protein gene gene1328 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06640 XM56_06645 XM56_06645 XM56_06645 1506662 1506862 - hypothetical protein gene gene1329 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06645 XM56_06650 XM56_06650 XM56_06650 1507287 1508129 - S-formylglutathione hydrolase gene gene1330 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06650 XM56_06655 XM56_06655 XM56_06655 1508150 1509304 - S-(hydroxymethyl)glutathione dehydrogenase catalyzes the formation of S-formylglutathione from S-(hydroxymethyl)glutathione%3B also catalyzes the formation of aldehyde or ketone from alcohols gene gene1331 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06655 XM56_06660 XM56_06660 XM56_06660 1509449 1510318 - LysR family transcriptional regulator gene gene1332 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06660 XM56_06665 XM56_06665 XM56_06665 1510455 1511627 + MFS transporter gene gene1333 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06665 XM56_06670 XM56_06670 folE folE 1511800 1512462 + GTP cyclohydrolase involved in the first step of tetrahydrofolate biosynthesis%3B catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1%2C2%2C3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water%3B forms a homopolymer gene gene1334 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06670 XM56_06675 XM56_06675 XM56_06675 1512517 1513683 + hypothetical protein gene gene1335 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06675 XM56_06680 XM56_06680 XM56_06680 1513865 1514902 + transcriptional regulator controls transcription of galETKM gene gene1336 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06680 XM56_06685 XM56_06685 XM56_06685 1515256 1516248 + sugar ABC transporter substrate-binding protein wtih MglAC is involved in the transport of beta-methylgalactoside gene gene1337 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06685 XM56_06690 XM56_06690 XM56_06690 1516441 1517961 + sugar ABC transporter ATP-binding protein gene gene1338 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06690 XM56_06695 XM56_06695 mglC mglC 1517982 1518992 + beta-methylgalactoside transporter permease ABC transporter%3B functions in galactose transport%3B part of MglA2C2B transporter complex gene gene1339 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06695 XM56_06700 XM56_06700 XM56_06700 1519629 1521788 + transcriptional regulator regulates the expression of formate dehydrogenase H and hydrogenase-3 structural genes gene gene1340 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06700 XM56_06705 XM56_06705 XM56_06705 1521964 1524108 - formate dehydrogenase selenocysteine-containing polypeptide%3B hydrogen linked formate dehydrogenase which catalyzes the oxidation of formate gene gene1341 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06705 XM56_06710 XM56_06710 XM56_06710 1524137 1524679 - effector protein gene gene1342 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06710 XM56_06715 XM56_06715 hycI hycI 1524915 1525388 - hydrogenase 3 maturation protease involved in the C-terminal processing of the large subunit of hydrogenase 3 HycE gene gene1343 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06715 XM56_06720 XM56_06720 XM56_06720 1525385 1525777 - formate hydrogenlyase maturation protein HycH gene gene1344 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06720 XM56_06725 XM56_06725 XM56_06725 1525779 1526582 - hydrogenase gene gene1345 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06725 XM56_06730 XM56_06730 XM56_06730 1526582 1527169 - formate hydrogenlyase complex iron-sulfur subunit electron transfer protein for hydrogenase-3%3B the formate hydrogenlyase complex comprises of a formate dehydrogenase%2C unidentified electron carriers and hydrogenase-3%3B in this non-energy conserving pathway%2C molecular hydrogen and carbodioxide are released from formate gene gene1346 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06730 XM56_06735 XM56_06735 hycE hycE 1527181 1528971 - hydrogenase 3 large subunit formate hydrogenlyase subunit 5%3B HycBCDEFG is part of the formate hydrogenlyase system which is involved in the cleaving of formate to dihydrogen and carbon dioxide gene gene1347 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06735 XM56_06740 XM56_06740 XM56_06740 1528973 1530610 - hydrogenase gene gene1348 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06740 XM56_06745 XM56_06745 hyfE hyfE 1530615 1531280 - hydrogenase 4 membrane subunit interacts with formate dehydrogenase to produce an active formate hydrogenlyase complex which cleaves formate to dihydrogen and carbon dioxide gene gene1349 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06745 XM56_06750 XM56_06750 XM56_06750 1531292 1532761 - hydrogenase 4 subunit D gene gene1350 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06750 XM56_06755 XM56_06755 hycD hycD 1532780 1533733 - hydrogenase 3 membrane subunit formate hydrogenlyase subunit 4%3B HycBCDEFG is part of the formate hydrogenlyase system which is involved in the cleaving of formate to dihydrogen and carbon dioxide gene gene1351 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06755 XM56_06760 XM56_06760 XM56_06760 1533745 1535772 - hydrogenase 4 subunit B gene gene1352 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06760 XM56_06765 XM56_06765 XM56_06765 1535769 1536410 - electron transporter gene gene1353 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06765 XM56_06770 XM56_06770 hypA hypA 1536817 1537164 + hydrogenase nickel incorporation protein plays a role in hydrogenase nickel cofactor insertion gene gene1354 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06770 XM56_06775 XM56_06775 XM56_06775 1537205 1537483 + hydrogenase gene gene1355 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06775 XM56_06780 XM56_06780 XM56_06780 1537534 1538301 - vancomycin high temperature exclusion protein involved in vancomycin sensitivity and other barrier functions of the cell envelope gene gene1356 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06780 XM56_06785 XM56_06785 XM56_06785 1538467 1540164 - malate dehydrogenase malic enzyme%3B oxaloacetate-decarboxylating%3B NAD-dependent%3B catalyzes the formation of pyruvate form malate gene gene1357 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06785 XM56_06790 XM56_06790 XM56_06790 1540629 1540976 + hypothetical protein gene gene1358 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06790 XM56_06795 XM56_06795 XM56_06795 1541050 1541946 - cytidine deaminase Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis gene gene1359 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06795 XM56_06800 XM56_06800 XM56_06800 1542085 1542780 - hypothetical protein gene gene1360 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06800 XM56_06805 XM56_06805 XM56_06805 1542777 1543184 - hypothetical protein gene gene1361 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06805 XM56_06810 XM56_06810 XM56_06810 1543283 1544503 - MFS transporter gene gene1362 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06810 XM56_06815 XM56_06815 XM56_06815 1544849 1546102 - hypothetical protein gene gene1363 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06815 XM56_06820 XM56_06820 XM56_06820 1546286 1547362 - sugar ABC transporter substrate-binding protein gene gene1364 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06820 XM56_06825 XM56_06825 XM56_06825 1548027 1548653 + membrane protein gene gene1365 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06825 XM56_06830 XM56_06830 metG metG 1548736 1550763 - methionine--tRNA ligase methionine--tRNA ligase%3B MetRS%3B adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate%3B some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not%3B four subfamilies exist based on sequence motifs and zinc content gene gene1366 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06830 XM56_06835 XM56_06835 XM56_06835 1551043 1552155 + antiporter gene gene1367 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06835 XM56_06840 XM56_06840 XM56_06840 1552511 1553152 + uridine kinase gene gene1368 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06840 XM56_06845 XM56_06845 XM56_06845 1553238 1553819 + deoxycytidine triphosphate deaminase gene gene1369 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06845 XM56_06850 XM56_06850 XM56_06850 1553884 1555731 + membrane assembly protein AsmA gene gene1370 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06850 XM56_06855 XM56_06855 dcuC dcuC 1556062 1557420 + C4-dicarboxylate transporter responsible for the transport of C4-dicarboxylates during anaerobic growth gene gene1371 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06855 XM56_06860 XM56_06860 XM56_06860 1557516 1559102 - membrane protein gene gene1372 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06860 XM56_06865 XM56_06865 cpsB cpsB 1559587 1561002 + mannose-1-phosphate guanyltransferase capsular polysaccharide colanic acid biosynthesis protein%3B catalyzes the formation of GDP-mannose from GTP and alpha-D-mannose 1-phosphate gene gene1373 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06865 XM56_06870 XM56_06870 XM56_06870 1561016 1562401 + phosphomannomutase capsular polysaccharide biosynthesis protein%3B catalyzes the formation of D-mannose 6-phosphate from alpha-D-mannose 1-phosphate gene gene1374 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06870 XM56_06875 XM56_06875 XM56_06875 1562556 1563446 + UTP--glucose-1-phosphate uridylyltransferase together with GalF subunit composes the UTP--glucose-1-phosphate uridylyltransferase%2C an enzyme that catalyzes the formation of UDP-glucose from UTP and alpha-D-glucose 1-phosphate%3B regulates cellular levels of UDP-glucose gene gene1375 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06875 XM56_06880 XM56_06880 XM56_06880 1563512 1564405 + UTP--glucose-1-phosphate uridylyltransferase gene gene1376 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06880 XM56_06885 XM56_06885 XM56_06885 1564549 1565670 + GDP-mannose 4%2C6-dehydratase catalyzes the formation of GDP-4-dehydro-6-deoxy-D-mannose from GDP mannose gene gene1377 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06885 XM56_06890 XM56_06890 XM56_06890 1565689 1566771 + perosamine synthetase gene gene1378 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06890 XM56_06895 XM56_06895 XM56_06895 1566956 1567609 + ABC transporter permease gene gene1379 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06895 XM56_06900 XM56_06900 XM56_06900 1567606 1568361 + teichoic acid ABC transporter ATPase gene gene1380 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06900 XM56_06905 XM56_06905 hypothetical protein hypothetical protein 1568385 1569125 + disrupted pseudogene gene1381 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06905 XM56_06910 XM56_06910 XM56_06910 1570127 1571710 + hypothetical protein gene gene1382 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06910 XM56_06915 XM56_06915 XM56_06915 1571716 1572489 + hypothetical protein gene gene1383 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06915 XM56_06920 XM56_06920 XM56_06920 1572554 1573666 + glycosyl transferase family 1 gene gene1384 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06920 XM56_06925 XM56_06925 XM56_06925 1574010 1575416 + 6-phosphogluconate dehydrogenase catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate gene gene1385 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06925 XM56_06930 XM56_06930 XM56_06930 1575672 1576286 - phosphoribosyl-ATP pyrophosphatase catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis gene gene1386 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06930 XM56_06935 XM56_06935 XM56_06935 1576280 1577056 - imidazole glycerol phosphate synthase gene gene1387 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06935 XM56_06940 XM56_06940 XM56_06940 1577038 1577775 - 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase gene gene1388 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06940 XM56_06945 XM56_06945 hisH hisH 1577781 1578371 - imidazole glycerol phosphate synthase with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate%2C 5-aminoimidazol-4-carboxamide ribonucleotide%2C and glutamate in histidine biosynthesis%3B the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide gene gene1389 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06945 XM56_06950 XM56_06950 XM56_06950 1578371 1579438 - imidazoleglycerol-phosphate dehydratase catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate gene gene1390 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06950 XM56_06955 XM56_06955 XM56_06955 1579435 1580559 - histidinol-phosphate aminotransferase catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis gene gene1391 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06955 XM56_06960 XM56_06960 hisD hisD 1580556 1581881 - histidinol dehydrogenase catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis%3B functions as a dimer gene gene1392 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06960 XM56_06965 XM56_06965 hisG hisG 1581885 1582784 - ATP phosphoribosyltransferase long form of enzyme%3B catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate%3B crucial role in histidine biosynthesis%3B forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors gene gene1393 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06965 XM56_06970 XM56_06970 XM56_06970 1583330 1584157 + hypothetical protein gene gene1394 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06970 XM56_06975 XM56_06975 XM56_06975 1584319 1585368 + transposase gene gene1395 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06975 XM56_06980 XM56_06980 XM56_06980 1585781 1586779 - sugar ABC transporter permease gene gene1396 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06980 XM56_06985 XM56_06985 XM56_06985 1586776 1588287 - ABC transporter gene gene1397 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06985 XM56_06990 XM56_06990 oxidoreductase oxidoreductase 1588507 1589598 + disrupted pseudogene gene1398 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06990 XM56_06995 XM56_06995 XM56_06995 1589847 1590062 + hypothetical protein gene gene1399 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_06995 XM56_07000 XM56_07000 XM56_07000 1590052 1591440 + Putrescine importer PuuP gene gene1400 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07000 XM56_07005 XM56_07005 sbcB sbcB 1591719 1593149 - exonuclease I Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates gene gene1401 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07005 XM56_07010 XM56_07010 XM56_07010 1593388 1594497 + thiamine biosynthesis protein ThiF gene gene1402 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07010 XM56_07015 XM56_07015 XM56_07015 1594643 1595701 + membrane protein gene gene1403 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07015 XM56_07020 XM56_07020 XM56_07020 1595865 1596182 + hypothetical protein gene gene1404 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07020 XM56_07025 XM56_07025 XM56_07025 1596272 1597255 - sugar ABC transporter permease gene gene1405 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07025 XM56_07030 XM56_07030 XM56_07030 1597258 1598196 - sugar ABC transporter permease gene gene1406 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07030 XM56_07035 XM56_07035 XM56_07035 1598273 1599754 - lipase gene gene1407 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07035 XM56_07040 XM56_07040 XM56_07040 1599991 1600974 - LacI family transcriptional regulator gene gene1408 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07040 XM56_07045 XM56_07045 XM56_07045 1601465 1602325 - GHMP kinase gene gene1409 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07045 XM56_07050 XM56_07050 XM56_07050 1602318 1603391 - threonine-phosphate decarboxylase cobalamin biosynthesis protein%3B decarboxylates L-threonine-O-3-phosphate to yield (R)-1-amino-2-propanol O-2-phosphate%2C the precursor for the linkage between the nucleotide loop and the corrin ring in cobalamin%3B structurally similar to histidinol phosphate aminotransferase gene gene1410 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07050 XM56_07055 XM56_07055 XM56_07055 1603549 1604346 - uroporphyrin-III methyltransferase catalyzes 2 sequential methylations%2C the formation of precorrin-1 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and uroporphyrin III%2C and the formation of precorrin-2 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and precorrin-1 gene gene1411 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07055 XM56_07060 XM56_07060 XM56_07060 1604355 1605593 - acetate kinase Enables the production of acetyl-CoA by phosphorylating acetate in the presence of ATP and a divalent cation gene gene1412 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07060 XM56_07065 XM56_07065 XM56_07065 1605621 1606055 - propanediol utilization protein gene gene1413 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07065 XM56_07070 XM56_07070 XM56_07070 1606060 1606410 - propanediol utilization protein gene gene1414 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07070 XM56_07075 XM56_07075 XM56_07075 1606410 1606967 - propanediol utilization protein gene gene1415 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07075 XM56_07080 XM56_07080 XM56_07080 1606970 1608373 - NADH dehydrogenase gene gene1416 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07080 XM56_07085 XM56_07085 XM56_07085 1608366 1609481 - propanediol utilization protein gene gene1417 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07085 XM56_07090 XM56_07090 XM56_07090 1609492 1610880 - aldehyde dehydrogenase gene gene1418 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07090 XM56_07095 XM56_07095 XM56_07095 1610880 1611896 - ATP:cob(I)alamin adenosyltransferase gene gene1419 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07095 XM56_07100 XM56_07100 XM56_07100 1611912 1612187 - ethanolamine utilization protein EutN gene gene1420 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07100 XM56_07105 XM56_07105 XM56_07105 1612191 1612688 - propanediol utilization protein gene gene1421 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07105 XM56_07110 XM56_07110 XM56_07110 1612685 1613332 - propanediol utilization protein catalyzes the formation of propionyl phosphate from propionyl-CoA in propanediol degradation gene gene1422 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07110 XM56_07115 XM56_07115 XM56_07115 1613332 1613934 - propanediol utilization protein gene gene1423 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07115 XM56_07120 XM56_07120 XM56_07120 1613956 1614231 - carboxysome structural protein EutM ethanolamine utilization protein%3B involved in the degredation of ethanolamine gene gene1424 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07120 XM56_07125 XM56_07125 XM56_07125 1614263 1614604 - propanediol dehydratase gene gene1425 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07125 XM56_07130 XM56_07130 XM56_07130 1614601 1616427 - glycerol dehydratase gene gene1426 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07130 XM56_07135 XM56_07135 pduE pduE 1616754 1617278 - propanediol dehydratase with pduCD catalyzes the formation of propionaldehyde from 1%2C2-propanediol gene gene1427 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07135 XM56_07140 XM56_07140 pduD pduD 1617293 1617964 - propanediol dehydratase with PduCE catalyzes the formation of propionaldehyde from 1%2C2-propanediol gene gene1428 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07140 XM56_07145 XM56_07145 pduC pduC 1617977 1619641 - propanediol dehydratase with pduED catalyzes the formation of propionaldehyde from 1%2C2-propanediol gene gene1429 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07145 XM56_07150 XM56_07150 XM56_07150 1619662 1620504 - propanediol utilization protein carboxysome shell protein%3B may be involved in the formation of the polyhedral organelles involved in propanediol degradation gene gene1430 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07150 XM56_07155 XM56_07155 XM56_07155 1620504 1620800 - carboxysome structural protein EutM ethanolamine utilization protein%3B involved in the degredation of ethanolamine gene gene1431 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07155 XM56_07160 XM56_07160 XM56_07160 1621402 1622217 + glycerol uptake facilitator GlpF involved in the transport of glycerol into the cell gene gene1432 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07160 XM56_07165 XM56_07165 XM56_07165 1622510 1623412 + hypothetical protein gene gene1433 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07165 XM56_07170 XM56_07170 XM56_07170 1624066 1625469 + cobyrinic acid a%2Cc-diamide synthase gene gene1434 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07170 XM56_07175 XM56_07175 XM56_07175 1625466 1626422 + cobalamin biosynthesis protein CobD%3B CbiB in Salmonella%3B converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group gene gene1435 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07175 XM56_07180 XM56_07180 cbiC cbiC 1626436 1627068 + precorrin-8X methylmutase catalyzes the interconversion of cobalt-precorrin-8X and cobyrinic acid in the anaerobic biosynthesis of cobalamin gene gene1436 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07180 XM56_07185 XM56_07185 cbiD cbiD 1627065 1628231 + cobalt-precorrin-6A synthase Catalyzes the methylation of C-1 in cobalt-precorrin-5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A gene gene1437 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07185 XM56_07190 XM56_07190 XM56_07190 1628228 1628830 + cobalt-precorrin-6Y C(5)-methyltransferase catalyzes the methylation of C-5 in cobalt-precorrin-6Y to form cobalt-precorrin-7W-a gene gene1438 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07190 XM56_07195 XM56_07195 XM56_07195 1628820 1629389 + cobalt-precorrin-6Y C(15)-methyltransferase catalyzes the methylation of either C-15 or C-5 in cobalt-precorrin-6Y to form cobalt-precorrin-7W%3B decarboxylating gene gene1439 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07195 XM56_07200 XM56_07200 cbiF cbiF 1629382 1630173 + cobalt-precorrin-4 C(11)-methyltransferase catalyzes the formation of cobalt-precorrin-5 from cobalt-precorrin-4 gene gene1440 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07200 XM56_07205 XM56_07205 XM56_07205 1630154 1631209 + cobalamin biosynthesis protein CbiG catalyzes the formation of cobalt-precorrin 4 from cobalt-precorrin 3 gene gene1441 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07205 XM56_07210 XM56_07210 cbiH cbiH 1631209 1631934 + cobalt-precorrin-3B C(17)-methyltransferase catalyzes the formation of cobalt-precorrin-4 from cobalt-precorrin-3B gene gene1442 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07210 XM56_07215 XM56_07215 XM56_07215 1631931 1632758 + cobalt-precorrin-6X reductase gene gene1443 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07215 XM56_07220 XM56_07220 XM56_07220 1632755 1633549 + sirohydrochlorin cobaltochelatase gene gene1444 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07220 XM56_07225 XM56_07225 XM56_07225 1633549 1634262 + cobalt-precorrin-2 C(20)-methyltransferase catalyzes the formation of precorrin-3A from precorrin-2 gene gene1445 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07225 XM56_07230 XM56_07230 XM56_07230 1634439 1635170 + cobalamin biosynthesis protein CbiM gene gene1446 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07230 XM56_07235 XM56_07235 XM56_07235 1635172 1635453 + cobalamin biosynthesis protein CbiN periplasmic cobalt binding component of the cobalt transport system gene gene1447 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07235 XM56_07240 XM56_07240 XM56_07240 1635440 1636117 + cobalamin biosynthesis protein CbiQ gene gene1448 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07240 XM56_07245 XM56_07245 cbiO cbiO 1636129 1636944 + cobalt transporter ATP-binding subunit with CbiNQ forms the ABC transporter for cobalt import gene gene1449 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07245 XM56_07250 XM56_07250 XM56_07250 1636956 1638494 + cobalamin biosynthesis protein CobQ gene gene1450 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07250 XM56_07255 XM56_07255 cobU cobU 1638491 1639036 + adenosylcobinamide kinase catalyzes ATP-dependent phosphorylation of adenosylcobinamide to form adenosylcobinamide phosphate and the addition of guanosine monophosphate to adenosylcobinamide phosphate to form adenosylcobinamide-GDP gene gene1451 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07255 XM56_07260 XM56_07260 cobS cobS 1639033 1639779 + cobalamin synthase catalyzes the formation of adenosylcobalamin from Ado-cobinamide-GDP and alpha-ribazole gene gene1452 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07260 XM56_07265 XM56_07265 XM56_07265 1639817 1640452 + alpha-ribazole phosphatase gene gene1453 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07265 XM56_07270 XM56_07270 cobT cobT 1640457 1641515 + nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5%2C6-dimethylbenzimidazole gene gene1454 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07270 XM56_07275 XM56_07275 XM56_07275 1641594 1641776 - hypothetical protein gene gene1455 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07275 XM56_07280 XM56_07280 nucleoside permease nucleoside permease 1641816 1642263 + disrupted pseudogene gene1456 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07280 XM56_07285 XM56_07285 XM56_07285 1643160 1643762 + LuxR family transcriptional regulator gene gene1457 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07285 XM56_07290 XM56_07290 XM56_07290 1643895 1644380 - T6SS protein Cts1W gene gene1458 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07290 XM56_07295 XM56_07295 XM56_07295 1644387 1646063 - membrane protein gene gene1459 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07295 XM56_07300 XM56_07300 XM56_07300 1646064 1646711 - membrane protein gene gene1460 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07300 XM56_07305 XM56_07305 XM56_07305 1646708 1648045 - glycosyltransferase gene gene1461 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07305 XM56_07310 XM56_07310 XM56_07310 1648084 1649088 - fimbrial protein gene gene1462 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07310 XM56_07315 XM56_07315 XM56_07315 1649095 1650258 - membrane protein gene gene1463 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07315 XM56_07320 XM56_07320 XM56_07320 1650336 1651361 - type VI secretion protein gene gene1464 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07320 XM56_07325 XM56_07325 XM56_07325 1651361 1653241 - type VI secretion protein gene gene1465 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07325 XM56_07330 XM56_07330 XM56_07330 1653958 1656627 + ATPase AAA gene gene1466 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07330 XM56_07335 XM56_07335 XM56_07335 1656803 1657354 + F17 fimbrial protein gene gene1467 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07335 XM56_07340 XM56_07340 XM56_07340 1657513 1658259 + pilus assembly protein gene gene1468 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07340 XM56_07345 XM56_07345 fimbrial protein fimbrial protein 1658363 1659889 + disrupted pseudogene gene1469 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07345 XM56_07350 XM56_07350 XM56_07350 1661023 1661625 + fimbrial protein gene gene1470 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07350 XM56_07355 XM56_07355 XM56_07355 1661730 1662254 + hypothetical protein gene gene1471 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07355 XM56_07360 XM56_07360 XM56_07360 1662278 1663774 + EvpB family type VI secretion protein gene gene1472 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07360 XM56_07365 XM56_07365 XM56_07365 1664113 1664598 + Hcp1 family type VI secretion system effector gene gene1473 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07365 XM56_07370 XM56_07370 XM56_07370 1664820 1665356 + type VI secretion protein gene gene1474 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07370 XM56_07375 XM56_07375 XM56_07375 1665360 1666709 + type VI secretion protein gene gene1475 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07375 XM56_07380 XM56_07380 XM56_07380 1666706 1668082 + membrane protein gene gene1476 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07380 XM56_07385 XM56_07385 XM56_07385 1668091 1671924 + type VI secretion protein IcmF gene gene1477 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07385 XM56_07390 XM56_07390 XM56_07390 1672106 1674817 + type IV secretion protein Rhs gene gene1478 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07390 XM56_07395 XM56_07395 XM56_07395 1674929 1675189 + PAAR motif protein gene gene1479 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07395 XM56_07400 XM56_07400 XM56_07400 1675195 1676037 + hypothetical protein gene gene1480 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07400 XM56_07405 XM56_07405 XM56_07405 1676063 1676890 + ImpE family T6SS protein Cts1E gene gene1481 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07405 XM56_07410 XM56_07410 XM56_07410 1676890 1677369 + lysozyme gene gene1482 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07410 XM56_07415 XM56_07415 XM56_07415 1677501 1678865 - argininosuccinate synthase catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis gene gene1483 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07415 XM56_07420 XM56_07420 XM56_07420 1679103 1680500 + multidrug transporter gene gene1484 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07420 XM56_07425 XM56_07425 XM56_07425 1680884 1682488 + PTS sugar transporter gene gene1485 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07425 XM56_07430 XM56_07430 XM56_07430 1682531 1683370 + histidine biosynthesis protein gene gene1486 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07430 XM56_07435 XM56_07435 XM56_07435 1683548 1684357 + haloacid dehalogenase gene gene1487 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07435 XM56_07440 XM56_07440 XM56_07440 1684462 1685223 + DeoR faimly transcriptional regulator gene gene1488 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07440 XM56_07445 XM56_07445 XM56_07445 1685292 1686464 - beta-lactamase gene gene1489 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07445 XM56_07450 XM56_07450 XM56_07450 1686643 1687617 + chemotaxis protein CheV gene gene1490 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07450 XM56_07455 XM56_07455 XM56_07455 1687697 1688281 - TetR family transcriptional regulator gene gene1491 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07455 XM56_07460 XM56_07460 XM56_07460 1688616 1689593 - GntR family transcriptional regulator gene gene1492 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07460 XM56_07465 XM56_07465 XM56_07465 1689701 1690159 + GNAT family acetyltransferase gene gene1493 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07465 XM56_07470 XM56_07470 XM56_07470 1690482 1691372 + 2-dehydropantoate 2-reductase gene gene1494 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07470 XM56_07475 XM56_07475 XM56_07475 1691482 1691557 - tRNA-Asn tRNA gene1495 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07475 XM56_07480 XM56_07480 fbpC fbpC 1691754 1692845 - ferric transporter ATP-binding subunit Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import gene gene1496 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07480 XM56_07485 XM56_07485 XM56_07485 1692871 1694949 - iron ABC transporter permease gene gene1497 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07485 XM56_07490 XM56_07490 XM56_07490 1695201 1696232 - hypothetical protein gene gene1498 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07490 XM56_07495 XM56_07495 XM56_07495 1696351 1697682 - MFS transporter gene gene1499 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07495 XM56_07500 XM56_07500 XM56_07500 1697771 1699348 - histidine kinase gene gene1500 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07500 XM56_07505 XM56_07505 XM56_07505 1699350 1699979 - transcriptional regulator gene gene1501 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07505 XM56_07510 XM56_07510 dpiA dpiA 1700181 1700867 - two-component response regulator DpiA regulates the expression of citrate fermentation genes gene gene1502 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07510 XM56_07515 XM56_07515 XM56_07515 1700889 1702466 - histidine kinase gene gene1503 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07515 XM56_07520 XM56_07520 [citrate [pro-3S]-lyase] ligase [citrate [pro-3S]-lyase] ligase 1702902 1703978 + disrupted pseudogene gene1504 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07520 XM56_07525 XM56_07525 XM56_07525 1704079 1704372 + citrate lyase subunit gamma acyl carrier protein%3B with CitE and CitF catalyzes the formation of oxaloacetate from citrate gene gene1505 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07525 XM56_07530 XM56_07530 XM56_07530 1704372 1705265 + citrate lyase subunit beta citryl-ACP lyase%3B catalyzes the formation of acetate and oxaloacetate from citrate gene gene1506 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07530 XM56_07535 XM56_07535 XM56_07535 1705269 1706786 + citrate lyase subunit alpha citrate-ACP transferase%2C the alpha subunit catalyzes the formation of (3S)-citryl-CoA from acetyl-CoA and citrate gene gene1507 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07535 XM56_07540 XM56_07540 XM56_07540 1706790 1707338 + 2-(5'-triphosphoribosyl)-3'-dephospho CoA synthase gene gene1508 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07540 XM56_07545 XM56_07545 XM56_07545 1707343 1708311 + 2-(5'-triphosphoribosyl)-3'-dephospho CoA synthase gene gene1509 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07545 XM56_07550 XM56_07550 XM56_07550 1708305 1709768 + citrate:succinate antiporter involved in the transport of citrate into the cell along with the export of succinate out of the cell gene gene1510 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07550 XM56_07555 XM56_07555 XM56_07555 1709843 1711135 - membrane protein gene gene1511 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07555 XM56_07560 XM56_07560 XM56_07560 1711154 1711660 - C4-dicarboxylate ABC transporter gene gene1512 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07560 XM56_07565 XM56_07565 XM56_07565 1711784 1712761 - C4-dicarboxylate ABC transporter gene gene1513 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07565 XM56_07570 XM56_07570 XM56_07570 1713152 1713319 + hypothetical protein gene gene1514 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07570 XM56_07575 XM56_07575 XM56_07575 1713328 1714077 + phosphopantetheinyl transferase gene gene1515 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07575 XM56_07580 XM56_07580 XM56_07580 1714185 1715087 + aspartyl beta-hydroxylase gene gene1516 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07580 XM56_07585 XM56_07585 XM56_07585 1715808 1717205 + major facilitator transporter gene gene1517 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07585 XM56_07590 XM56_07590 XM56_07590 1717258 1717689 + PTS sugar transporter subunit IIA gene gene1518 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07590 XM56_07595 XM56_07595 XM56_07595 1717949 1718488 + hypothetical protein gene gene1519 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07595 XM56_07600 XM56_07600 XM56_07600 1718499 1719197 - pseudouridylate synthase gene gene1520 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07600 XM56_07605 XM56_07605 XM56_07605 1719431 1719679 + iron ABC transporter substrate-binding protein gene gene1521 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07605 XM56_07610 XM56_07610 XM56_07610 1719963 1720038 - tRNA-Asn tRNA gene1522 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07610 XM56_07615 XM56_07615 XM56_07615 1720208 1720948 - molecular chaperone gene gene1523 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07615 XM56_07620 XM56_07620 XM56_07620 1720945 1722279 - hypothetical protein gene gene1524 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07620 XM56_07625 XM56_07625 XM56_07625 1722294 1724918 - fimbrial protein gene gene1525 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07625 XM56_07630 XM56_07630 XM56_07630 1724967 1725701 - pilus assembly protein gene gene1526 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07630 XM56_07635 XM56_07635 XM56_07635 1725794 1726324 - fimbrial protein gene gene1527 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07635 XM56_07640 XM56_07640 XM56_07640 1726702 1730421 - histidine kinase gene gene1528 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07640 XM56_07645 XM56_07645 XM56_07645 1730501 1731133 - LuxR family transcriptional regulator gene gene1529 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07645 XM56_07650 XM56_07650 XM56_07650 1731717 1731792 - tRNA-Asn tRNA gene1530 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07650 XM56_07655 XM56_07655 XM56_07655 1731975 1732778 - DgsA anti-repressor MtfA Mlc anti-repressor%3B regulates ptsG by binding and inactivating Mlc gene gene1531 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07655 XM56_07660 XM56_07660 XM56_07660 1733315 1733704 + ABC transporter substrate-binding protein gene gene1532 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07660 XM56_07665 XM56_07665 XM56_07665 1733701 1734807 - carbohydrate kinase gene gene1533 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07665 XM56_07670 XM56_07670 XM56_07670 1735898 1736539 + beta-fimbriae major subunit gene gene1534 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07670 XM56_07675 XM56_07675 XM56_07675 1736660 1737301 + beta-fimbriae major subunit gene gene1535 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07675 XM56_07680 XM56_07680 XM56_07680 1737301 1737951 + beta-fimbriae major subunit gene gene1536 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07680 XM56_07685 XM56_07685 XM56_07685 1738072 1740450 + membrane protein gene gene1537 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07685 XM56_07690 XM56_07690 XM56_07690 1740511 1741254 + fimbrial protein gene gene1538 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07690 XM56_07695 XM56_07695 XM56_07695 1741428 1742477 + transposase gene gene1539 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07695 XM56_07700 XM56_07700 glucose-1-phosphate adenylyltransferase glucose-1-phosphate adenylyltransferase 1743089 1744366 - disrupted pseudogene gene1540 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07700 XM56_07705 XM56_07705 XM56_07705 1744698 1746023 + phosphoanhydride phosphorylase gene gene1541 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07705 XM56_07710 XM56_07710 XM56_07710 1746275 1746475 - selenoprotein YdfZ gene gene1542 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07710 XM56_07715 XM56_07715 XM56_07715 1746682 1747584 - hypothetical protein gene gene1543 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07715 XM56_07720 XM56_07720 XM56_07720 1747664 1748122 - AsnC family transcriptional regulator gene gene1544 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07720 XM56_07725 XM56_07725 XM56_07725 1748375 1748908 - membrane protein gene gene1545 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07725 XM56_07730 XM56_07730 XM56_07730 1749146 1750156 - zinc-binding dehydrogenase gene gene1546 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07730 XM56_07735 XM56_07735 XM56_07735 1750542 1751744 + transposase gene gene1547 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07735 XM56_07740 XM56_07740 lacZ lacZ 1751844 1754996 - beta-D-galactosidase forms a homotetramer%3B hydrolyzes lactose disaccharide to galactose and glucose%3B converts lactose to allolactose which is the natural inducer of the lac operon gene gene1548 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07740 XM56_07745 XM56_07745 lacI lacI 1755175 1756209 - lac repressor transcriptional repressor of lac operon%3B forms a homotetramer as a dimer of dimers%3B binds specific sites in lac operon resulting in DNA looping between the operators%3B binds allolactose as inducer gene gene1549 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07745 XM56_07750 XM56_07750 XM56_07750 1756691 1756903 + cold-shock protein gene gene1550 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07750 XM56_07755 XM56_07755 XM56_07755 1757157 1757348 + hypothetical protein gene gene1551 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07755 XM56_07760 XM56_07760 XM56_07760 1757482 1759221 - chemotaxis protein gene gene1552 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07760 XM56_07765 XM56_07765 XM56_07765 1759469 1759840 - CoA-transferase gene gene1553 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07765 XM56_07770 XM56_07770 XM56_07770 1760087 1760326 - hypothetical protein gene gene1554 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07770 XM56_07775 XM56_07775 XM56_07775 1760890 1761588 + membrane protein gene gene1555 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07775 XM56_07780 XM56_07780 XM56_07780 1761805 1764507 + magnesium ABC transporter ATPase P-type%3B involved in magnesium transport into the cytoplasm gene gene1556 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07780 XM56_07785 XM56_07785 XM56_07785 1764573 1765607 - NADP-dependent oxidoreductase gene gene1557 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07785 XM56_07790 XM56_07790 XM56_07790 1765771 1766190 - universal stress protein UspC ppGpp-dependent%3B membrane-associated%2C stress protein produced under conditions of nutrient deprivation%2C osmotic shock and oxidative stress gene gene1558 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07790 XM56_07795 XM56_07795 XM56_07795 1767214 1767564 + transcriptional regulator with FlhC is involved in the activation of class 2 flagellar genes and is involved in the regulation of a number of other genetic systems gene gene1559 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07795 XM56_07800 XM56_07800 XM56_07800 1767568 1768149 + transcriptional regulator With FlhD is involved in the activation of class 2 flagellar genes and as well as a number of other genetic systems gene gene1560 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07800 XM56_07805 XM56_07805 XM56_07805 1768287 1769174 + flagellar motor protein MotA With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine gene gene1561 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07805 XM56_07810 XM56_07810 motB motB 1769171 1770400 + flagellar motor protein MotB with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine gene gene1562 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07810 XM56_07815 XM56_07815 XM56_07815 1770417 1772465 + chemotaxis protein CheA gene gene1563 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07815 XM56_07820 XM56_07820 XM56_07820 1772646 1773143 + chemotaxis protein CheW gene gene1564 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07820 XM56_07825 XM56_07825 XM56_07825 1773425 1775098 + chemotaxis protein serine sensor receptor gene gene1565 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07825 XM56_07830 XM56_07830 XM56_07830 1775283 1776920 + methyl-accepting protein IV mediates taxis toward dipeptides gene gene1566 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07830 XM56_07835 XM56_07835 XM56_07835 1776949 1777809 + chemotaxis protein CheR methylates the MCP gene gene1567 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07835 XM56_07840 XM56_07840 XM56_07840 1777809 1778858 + chemotaxis protein regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins gene gene1568 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07840 XM56_07845 XM56_07845 XM56_07845 1779050 1779439 + chemotaxis protein CheY chemotaxis regulator that%2C when phosphorylated%2C interacts with the flagellar motor causing the flagella to spin clockwise which causes the cell to tumble gene gene1569 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07845 XM56_07850 XM56_07850 XM56_07850 1779449 1780093 + chemotaxis protein CheZ cytosolic phosphatase which functions in the chemotaxis signal transduction complex by controlling the level of phosphorylated CheY through dephosphorylation gene gene1570 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07850 XM56_07855 XM56_07855 XM56_07855 1780178 1781821 - peptidase S8 gene gene1571 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07855 XM56_07860 XM56_07860 flhB flhB 1782236 1783387 + flagellar biosynthesis protein FlhB membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export gene gene1572 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07860 XM56_07865 XM56_07865 XM56_07865 1783387 1785465 + flagellar biosynthesis protein FlhA gene gene1573 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07865 XM56_07870 XM56_07870 XM56_07870 1785465 1785887 + flagellar protein flhE gene gene1574 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07870 XM56_07875 XM56_07875 XM56_07875 1786402 1788909 + Invasin gene gene1575 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07875 XM56_07880 XM56_07880 XM56_07880 1788912 1789352 - flagellar biosynthesis protein FlgN export chaperone for FlgK and FlgL gene gene1576 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07880 XM56_07885 XM56_07885 XM56_07885 1789404 1789703 - flagellar biosynthesis anti-sigma factor FlgM regulates the flagellar specific sigma28 transcription factor gene gene1577 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07885 XM56_07890 XM56_07890 XM56_07890 1789852 1790526 - flagellar basal body P-ring biosynthesis protein FlgA gene gene1578 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07890 XM56_07895 XM56_07895 XM56_07895 1790716 1791129 + flagellar biosynthesis protein FlgB gene gene1579 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07895 XM56_07900 XM56_07900 flgC flgC 1791135 1791539 + flagellar basal body rod protein FlgC with FlgF and B makes up the proximal portion of the flagellar basal body rod gene gene1580 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07900 XM56_07905 XM56_07905 flgD flgD 1791555 1792241 + flagellar basal body rod modification protein acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod%3B Yersinia%2C Vibrio parahaemolyticus%2C Bradyrhizobium and other organisms have 2 copies of some flagellar genes%3B in V. parahaemolyticus one set used for lateral flagella production and the other is used for the polar flagella production gene gene1581 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07905 XM56_07910 XM56_07910 flgE flgE 1792525 1793784 + flagellar hook protein FlgE the hook connects flagellar basal body to the flagellar filament gene gene1582 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07910 XM56_07915 XM56_07915 flgF flgF 1793806 1794561 + flagellar basal body rod protein FlgF FlgF%2C with FlgB and C%2C makes up the proximal portion of the flagellar basal body rod gene gene1583 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07915 XM56_07920 XM56_07920 flgG flgG 1794588 1795370 + flagellar basal body rod protein FlgG makes up the distal portion of the flagellar basal body rod gene gene1584 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07920 XM56_07925 XM56_07925 XM56_07925 1795508 1796224 + flagellar L-ring protein FlgH gene gene1585 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07925 XM56_07930 XM56_07930 flgI flgI 1796236 1797357 + flagellar basal body P-ring biosynthesis protein FlgA part of the basal body which consists of four rings L%2C P%2C S%2C and M mounted on a central rod%3B Vibrio parahaemolyticus%2C Yersinia%2C Bradyrhizobium and other bacteria have two copies of this and other flagellar genes%3B the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum gene gene1586 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07930 XM56_07935 XM56_07935 flgJ flgJ 1797357 1798319 + flagellar rod assembly protein FlgJ Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space gene gene1587 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07935 XM56_07940 XM56_07940 flgK flgK 1798615 1800279 + flagellar hook protein FlgK with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook gene gene1588 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07940 XM56_07945 XM56_07945 flgL flgL 1800393 1801373 + flagellar hook protein FlgL with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook%3B Yersinia%2C Vibrio parahaemolyticus%2C Bradyrhizobium and other organisms have 2 copies of this and other flagellar genes gene gene1589 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07945 XM56_07950 XM56_07950 fliR fliR 1801631 1802413 - flagellar biosynthesis protein FliR FliR%2C with proteins FliP and FliQ%2C forms the core of the central channel in the flagella export apparatus gene gene1590 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07950 XM56_07955 XM56_07955 fliQ fliQ 1802416 1802685 - flagellar biosynthesis protein FliQ with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus gene gene1591 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07955 XM56_07960 XM56_07960 fliP fliP 1802697 1803449 - flagellar biosynthesis protein flip FliP%2C with proteins FliQ and FliR%2C forms the core of the central channel in the flagella export apparatus gene gene1592 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07960 XM56_07965 XM56_07965 XM56_07965 1803446 1804012 - flagellar biosynthesis protein gene gene1593 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07965 XM56_07970 XM56_07970 fliN fliN 1804012 1804428 - flagellar motor switch protein FliN One of three proteins involved in switching the direction of the flagellar rotation gene gene1594 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07970 XM56_07975 XM56_07975 fliM fliM 1804421 1805425 - flagellar motor switch protein FliM with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation gene gene1595 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07975 XM56_07980 XM56_07980 fliL fliL 1805431 1805901 - flagellar basal body-associated protein FliL interacts with cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring gene gene1596 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07980 XM56_07985 XM56_07985 XM56_07985 1806217 1807575 - flagellar hook-length control protein FliK gene gene1597 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07985 XM56_07990 XM56_07990 fliJ fliJ 1807572 1808018 - flagellar biosynthesis chaperone rod/hook and filament chaperone gene gene1598 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07990 XM56_07995 XM56_07995 fliI fliI 1808087 1809451 - ATP synthase involved in type III protein export during flagellum assembly gene gene1599 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_07995 XM56_08000 XM56_08000 fliH fliH 1809451 1810173 - flagellar assembly protein H binds to and inhibits the function of flagella specific ATPase FliI gene gene1600 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08000 XM56_08005 XM56_08005 fliG fliG 1810166 1811158 - flagellar motor switch protein G One of three proteins involved in switching the direction of the flagellar rotation gene gene1601 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08005 XM56_08010 XM56_08010 XM56_08010 1811155 1812834 - flagellar M-ring protein FliF gene gene1602 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08010 XM56_08015 XM56_08015 XM56_08015 1813163 1813474 + flagellar hook-basal body protein FliE gene gene1603 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08015 XM56_08020 XM56_08020 XM56_08020 1813811 1813999 + DNA repair protein gene gene1604 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08020 XM56_08025 XM56_08025 XM56_08025 1814282 1814530 + hypothetical protein gene gene1605 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08025 XM56_08030 XM56_08030 XM56_08030 1814527 1814922 - hypothetical protein gene gene1606 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08030 XM56_08035 XM56_08035 XM56_08035 1814955 1815188 - hypothetical protein gene gene1607 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08035 XM56_08040 XM56_08040 XM56_08040 1815663 1815839 - damage-inducible protein gene gene1608 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08040 XM56_08045 XM56_08045 XM56_08045 1815918 1816187 - hypothetical protein gene gene1609 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08045 XM56_08050 XM56_08050 XM56_08050 1816502 1817104 - DNA-3-methyladenine glycosidase gene gene1610 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08050 XM56_08055 XM56_08055 XM56_08055 1817191 1820151 - metal-dependent phosphohydrolase gene gene1611 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08055 XM56_08060 XM56_08060 XM56_08060 1820482 1821351 - AraC family transcriptional regulator gene gene1612 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08060 XM56_08065 XM56_08065 XM56_08065 1821625 1821987 - flagellar biosynthesis protein FliT gene gene1613 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08065 XM56_08070 XM56_08070 fliS fliS 1821999 1822397 - flagellar protein FliS flagellin specific chaperone gene gene1614 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08070 XM56_08075 XM56_08075 XM56_08075 1822408 1823808 - flagellar cap protein FliD gene gene1615 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08075 XM56_08080 XM56_08080 XM56_08080 1824077 1825186 + flagellin structural flagella protein gene gene1616 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08080 XM56_08085 XM56_08085 XM56_08085 1825376 1826485 + flagellin structural flagella protein gene gene1617 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08085 XM56_08090 XM56_08090 XM56_08090 1826633 1827838 + flagellar protein FliB gene gene1618 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08090 XM56_08095 XM56_08095 fliA fliA 1828029 1828751 + flagellar biosynthesis sigma factor sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this sigma factor directs late flagellar biosynthesis genes gene gene1619 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08095 XM56_08100 XM56_08100 XM56_08100 1828807 1829316 + flagellar biosynthesis protein FliZ gene gene1620 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08100 XM56_08105 XM56_08105 XM56_08105 1829695 1830687 + cysteine desulfhydrase gene gene1621 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08105 XM56_08110 XM56_08110 XM56_08110 1830806 1831606 + cystine transporter subunit gene gene1622 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08110 XM56_08115 XM56_08115 XM56_08115 1831606 1832268 + amino acid ABC transporter permease gene gene1623 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08115 XM56_08120 XM56_08120 XM56_08120 1832271 1833026 + amino acid ABC transporter ATP-binding protein gene gene1624 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08120 XM56_08125 XM56_08125 XM56_08125 1833098 1833469 - transcriptional regulator gene gene1625 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08125 XM56_08130 XM56_08130 XM56_08130 1833469 1833762 - hypothetical protein gene gene1626 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08130 XM56_08135 XM56_08135 putA putA 1834062 1838051 - transcriptional regulator proline utilization protein A%3B multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate%3B in Escherichai coli this protein also self-regulates transcription via a DNA-binding domain at the N-terminus%3B forms dimers and is a peripherally membrane-associated protein gene gene1627 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08135 XM56_08140 XM56_08140 XM56_08140 1838577 1840061 + proline:sodium symporter PutP involved in the sodium dependent uptake of proline gene gene1628 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08140 XM56_08145 XM56_08145 XM56_08145 1840226 1840555 - hypothetical protein gene gene1629 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08145 XM56_08150 XM56_08150 XM56_08150 1840559 1841626 - hypothetical protein gene gene1630 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08150 XM56_08155 XM56_08155 XM56_08155 1842063 1842254 + hypothetical protein gene gene1631 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08155 XM56_08160 XM56_08160 XM56_08160 1842417 1843277 + iron permease gene gene1632 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08160 XM56_08165 XM56_08165 XM56_08165 1843294 1844424 + ferrous iron transporter with EfeUB forms an iron transport system which is silent in E. coli K-12 due to a mutation in EfeU gene gene1633 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08165 XM56_08170 XM56_08170 XM56_08170 1844433 1845734 + peroxidase gene gene1634 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08170 XM56_08175 XM56_08175 XM56_08175 1845936 1846535 - NAD(P)H:quinone oxidoreductase catalyzes the transfer of electrons from NADH to ubiquinone gene gene1635 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08175 XM56_08180 XM56_08180 XM56_08180 1846705 1847187 - DNA-binding protein gene gene1636 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08180 XM56_08185 XM56_08185 XM56_08185 1847521 1848699 + N-acetylneuraminic acid mutarotase gene gene1637 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08185 XM56_08190 XM56_08190 XM56_08190 1848710 1848850 + AraC family transcriptional regulator gene gene1638 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08190 XM56_08195 XM56_08195 pyrimidine permease pyrimidine permease 1848907 1850246 - disrupted pseudogene gene1639 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08195 XM56_08200 XM56_08200 XM56_08200 1850317 1850865 - FMN reductase gene gene1640 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08200 XM56_08205 XM56_08205 XM56_08205 1850915 1851505 - malonic semialdehyde reductase gene gene1641 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08205 XM56_08210 XM56_08210 XM56_08210 1851517 1852353 - aminoacrylate hydrolase gene gene1642 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08210 XM56_08215 XM56_08215 XM56_08215 1852386 1852772 - aminoacrylate peracid reductase gene gene1643 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08215 XM56_08220 XM56_08220 XM56_08220 1852822 1853529 - amidohydrolase gene gene1644 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08220 XM56_08225 XM56_08225 pyrimidine monooxygenase pyrimidine monooxygenase 1853610 1854005 - disrupted pseudogene gene1645 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08225 XM56_08230 XM56_08230 XM56_08230 1854165 1854833 + TetR family transcriptional regulator gene gene1646 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08230 XM56_08235 XM56_08235 XM56_08235 1854891 1856321 - amino acid permease gene gene1647 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08235 XM56_08240 XM56_08240 XM56_08240 1856676 1856751 + tRNA-Lys tRNA gene1648 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08240 XM56_08245 XM56_08245 XM56_08245 1856790 1857047 - hypothetical protein gene gene1649 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08245 XM56_08250 XM56_08250 XM56_08250 1857123 1857392 + transposase gene gene1650 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08250 XM56_08255 XM56_08255 XM56_08255 1857527 1857973 + integrase gene gene1651 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08255 XM56_08260 XM56_08260 XM56_08260 1858395 1859129 - SAM-dependent methyltransferase gene gene1652 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08260 XM56_08265 XM56_08265 XM56_08265 1859533 1860030 + hypothetical protein gene gene1653 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08265 XM56_08270 XM56_08270 XM56_08270 1860112 1860441 - hypothetical protein gene gene1654 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08270 XM56_08275 XM56_08275 XM56_08275 1860586 1862085 + cytoplasmic alpha-amylase converts 1%2C4-alpha-D-glucans to maltodextrin gene gene1655 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08275 XM56_08280 XM56_08280 XM56_08280 1862337 1862591 + membrane protein gene gene1656 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08280 XM56_08285 XM56_08285 XM56_08285 1862622 1862960 - membrane protein gene gene1657 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08285 XM56_08290 XM56_08290 XM56_08290 1863071 1863295 - hypothetical protein gene gene1658 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08290 XM56_08295 XM56_08295 sirA sirA 1863989 1864645 + response regulator in Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system%3B in Salmonella SirA and BarA regulate virulence gene expression also via the Csr system gene gene1659 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08295 XM56_08300 XM56_08300 uvrC uvrC 1864638 1866470 + excinuclease ABC subunit C The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision gene gene1660 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08300 XM56_08305 XM56_08305 XM56_08305 1866529 1867077 + CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase gene gene1661 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08305 XM56_08310 XM56_08310 XM56_08310 1867222 1867297 + tRNA-Gly tRNA gene1662 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08310 XM56_08315 XM56_08315 XM56_08315 1867348 1867421 + tRNA-Cys tRNA gene1663 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08315 XM56_08320 XM56_08320 XM56_08320 1867432 1867517 + tRNA-Leu tRNA gene1664 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08320 XM56_08325 XM56_08325 XM56_08325 1867742 1867957 - late control protein B gene gene1665 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08325 XM56_08330 XM56_08330 XM56_08330 1868237 1869286 + transposase gene gene1666 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08330 XM56_08335 XM56_08335 XM56_08335 1869618 1870685 - late control protein D gene gene1667 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08335 XM56_08340 XM56_08340 tail protein tail protein 1870657 1873288 - disrupted pseudogene gene1668 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08340 XM56_08345 XM56_08345 XM56_08345 1873281 1873400 - tail protein gene gene1669 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08345 XM56_08350 XM56_08350 XM56_08350 1873415 1873762 - phage tail protein gene gene1670 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08350 XM56_08355 XM56_08355 XM56_08355 1873839 1874354 - major tail tube protein gene gene1671 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08355 XM56_08360 XM56_08360 XM56_08360 1874366 1875541 - tail sheath protein gene gene1672 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08360 XM56_08365 XM56_08365 XM56_08365 1875851 1876036 - hypothetical protein gene gene1673 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08365 XM56_08370 XM56_08370 XM56_08370 1876600 1877523 - transposase gene gene1674 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08370 XM56_08375 XM56_08375 XM56_08375 1878308 1878628 - hypothetical protein gene gene1675 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08375 XM56_08380 XM56_08380 XM56_08380 1878618 1878824 - hypothetical protein gene gene1676 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08380 XM56_08385 XM56_08385 XM56_08385 1878966 1879133 + phage protein gene gene1677 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08385 XM56_08390 XM56_08390 XM56_08390 1879205 1879465 + antitoxin DinJ DNA-damage-inducible protein J%3B antitoxin of YafQ-DinJ toxin-antitoxin system gene gene1678 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08390 XM56_08395 XM56_08395 XM56_08395 1879472 1879750 + mRNA interferase YafQ gene gene1679 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08395 XM56_08400 XM56_08400 XM56_08400 1879803 1880066 - tail protein gene gene1680 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08400 XM56_08405 XM56_08405 XM56_08405 1880059 1880415 - tail fiber assembly protein gene gene1681 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08405 XM56_08410 XM56_08410 XM56_08410 1880415 1881707 - phage tail fiber protein gene gene1682 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08410 XM56_08415 XM56_08415 XM56_08415 1881680 1881961 - variable tail fiber protein gene gene1683 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08415 XM56_08420 XM56_08420 XM56_08420 1881954 1882499 - tail protein gene gene1684 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08420 XM56_08425 XM56_08425 XM56_08425 1882492 1883400 - baseplate assembly protein gene gene1685 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08425 XM56_08430 XM56_08430 XM56_08430 1883400 1883756 - baseplate assembly protein gene gene1686 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08430 XM56_08435 XM56_08435 XM56_08435 1883753 1884388 - baseplate assembly protein gene gene1687 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08435 XM56_08440 XM56_08440 XM56_08440 1884525 1884797 + toxin gene gene1688 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08440 XM56_08445 XM56_08445 XM56_08445 1884778 1885068 + antitoxin gene gene1689 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08445 XM56_08450 XM56_08450 XM56_08450 1885134 1886195 + hypothetical protein gene gene1690 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08450 XM56_08455 XM56_08455 XM56_08455 1886234 1886680 - virion morphogenesis protein gene gene1691 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08455 XM56_08460 XM56_08460 XM56_08460 1886677 1887144 - tail fiber protein gene gene1692 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08460 XM56_08465 XM56_08465 XM56_08465 1887246 1887671 - lysozyme gene gene1693 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08465 XM56_08470 XM56_08470 XM56_08470 1887675 1888070 - bacteriophage P7 related protein gene gene1694 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08470 XM56_08475 XM56_08475 XM56_08475 1888057 1888236 - holin gene gene1695 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08475 XM56_08480 XM56_08480 transposase transposase 1888511 1888995 - disrupted pseudogene gene1696 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08480 XM56_08485 XM56_08485 transposase transposase 1889046 1889174 - disrupted pseudogene gene1697 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08485 XM56_08490 XM56_08490 MFS transporter MFS transporter 1889459 1890184 - disrupted pseudogene gene1698 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08490 XM56_08495 XM56_08495 XM56_08495 1890218 1891420 - transposase gene gene1699 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08495 XM56_08500 XM56_08500 MFS transporter MFS transporter 1891479 1891973 - disrupted pseudogene gene1700 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08500 XM56_08505 XM56_08505 XM56_08505 1892076 1892993 + LysR family transcriptional regulator gene gene1701 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08505 XM56_08510 XM56_08510 XM56_08510 1893595 1894014 - DNA-binding protein gene gene1702 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08510 XM56_08515 XM56_08515 XM56_08515 1894415 1895059 + antibiotic acetyltransferase gene gene1703 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08515 XM56_08520 XM56_08520 XM56_08520 1895202 1895384 + hypothetical protein gene gene1704 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08520 XM56_08525 XM56_08525 XM56_08525 1895807 1896223 + antitermination protein Q gene gene1705 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08525 XM56_08530 XM56_08530 XM56_08530 1896400 1896576 - hypothetical protein gene gene1706 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08530 XM56_08535 XM56_08535 XM56_08535 1896803 1896979 + holin gene gene1707 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08535 XM56_08540 XM56_08540 XM56_08540 1896981 1897463 + lysozyme gene gene1708 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08540 XM56_08545 XM56_08545 XM56_08545 1897836 1898720 + alpha/beta hydrolase gene gene1709 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08545 XM56_08550 XM56_08550 XM56_08550 1899022 1899678 + membrane protein gene gene1710 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08550 XM56_08555 XM56_08555 XM56_08555 1899785 1900669 - LysR family transcriptional regulator gene gene1711 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08555 XM56_08560 XM56_08560 XM56_08560 1900804 1901970 + beta-lactamase gene gene1712 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08560 XM56_08565 XM56_08565 ychF ychF 1902117 1903208 - GTP-binding protein EngD%3B translation-associated GTPase%3B the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3)%3B fluorescence spectroscopy revealed nucleic acid binding%3B the yeast protein YBR025c interacts with the translation elongation factor eEF1 gene gene1713 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08565 XM56_08570 XM56_08570 XM56_08570 1903476 1903934 + hypothetical protein gene gene1714 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08570 XM56_08575 XM56_08575 XM56_08575 1903989 1904582 - peptidyl-tRNA hydrolase gene gene1715 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08575 XM56_08580 XM56_08580 XM56_08580 1904914 1905186 + hypothetical protein YchH%3B transcription activated by CRP (cyclic AMP receptor protein)%2C a global transcription factor involved in regulation of metabolism in enteric bacteria%3B ychH presents a class II promoter to bind CRP%3B unknown function gene gene1716 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08580 XM56_08585 XM56_08585 XM56_08585 1905270 1905509 + hypothetical protein gene gene1717 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08585 XM56_08590 XM56_08590 XM56_08590 1905673 1906620 - ribose-phosphate pyrophosphokinase catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP gene gene1718 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08590 XM56_08595 XM56_08595 XM56_08595 1906818 1907699 - kinase gene gene1719 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08595 XM56_08600 XM56_08600 XM56_08600 1907701 1908324 - membrane protein gene gene1720 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08600 XM56_08605 XM56_08605 hemA hemA 1908630 1909892 + glutamyl-tRNA reductase catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH%3B the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid%3B functions in porphyrin (tetrapyrroles) biosynthesis%3B the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins gene gene1721 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08605 XM56_08610 XM56_08610 prfA prfA 1909924 1911006 + peptide chain release factor 1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1%3B this protein is similar to release factor 2 gene gene1722 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08610 XM56_08615 XM56_08615 XM56_08615 1911006 1911860 + SAM-dependent methyltransferase HemK%3B PrmC%3B transfers a methyl group from S-adenosylmethionine to amide nitrogen of specific glutamine residues in protein chain release factors PrfA and PrfB gene gene1723 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08615 XM56_08620 XM56_08620 XM56_08620 1911878 1912279 + siroheme synthase gene gene1724 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08620 XM56_08625 XM56_08625 XM56_08625 1912276 1913085 + hypothetical protein gene gene1725 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08625 XM56_08630 XM56_08630 XM56_08630 1913230 1914084 + 2-dehydro-3-deoxyphosphooctonate aldolase catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis gene gene1726 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08630 XM56_08635 XM56_08635 transporter transporter 1914158 1915858 - disrupted pseudogene gene1727 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08635 XM56_08640 XM56_08640 XM56_08640 1916414 1917532 + membrane protein gene gene1728 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08640 XM56_08645 XM56_08645 XM56_08645 1917819 1917908 - tRNA-Ser tRNA gene1729 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08645 XM56_08650 XM56_08650 XM56_08650 1918049 1918933 - glycerophosphodiester phosphodiesterase gene gene1730 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08650 XM56_08655 XM56_08655 XM56_08655 1919121 1919210 - tRNA-Ser tRNA gene1731 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08655 XM56_08660 XM56_08660 ghrA ghrA 1919429 1920370 + bifunctional glyoxylate/hydroxypyruvate reductase A catalyzes the formation of glycolate and glycerate from glyoxylate and hydroxypyruvate%2C respectively gene gene1732 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08660 XM56_08665 XM56_08665 XM56_08665 1920519 1921256 + hydrolase gene gene1733 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08665 XM56_08670 XM56_08670 XM56_08670 1921320 1921880 + molecular chaperone gene gene1734 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08670 XM56_08675 XM56_08675 XM56_08675 1921918 1922481 - lipoprotein gene gene1735 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08675 XM56_08680 XM56_08680 XM56_08680 1922698 1923903 - multidrug resistance protein MdtH Confers resistance to norfloxacin and enoxacin gene gene1736 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08680 XM56_08685 XM56_08685 XM56_08685 1924578 1924895 + membrane protein gene gene1737 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08685 XM56_08690 XM56_08690 XM56_08690 1924907 1925641 - membrane protein gene gene1738 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08690 XM56_08695 XM56_08695 XM56_08695 1926318 1926902 + ribosomal-protein-alanine acetyltransferase gene gene1739 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08695 XM56_08700 XM56_08700 XM56_08700 1926910 1927551 + hypothetical protein gene gene1740 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08700 XM56_08705 XM56_08705 XM56_08705 1927544 1928503 + virulence factor MviM gene gene1741 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08705 XM56_08710 XM56_08710 XM56_08710 1928642 1930177 + membrane protein gene gene1742 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08710 XM56_08715 XM56_08715 XM56_08715 1930497 1931606 - calcium/sodium:proton antiporter gene gene1743 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08715 XM56_08720 XM56_08720 XM56_08720 1931827 1932663 - FAD-binding protein gene gene1744 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08720 XM56_08725 XM56_08725 MFS transporter MFS transporter 1932852 1934019 - disrupted pseudogene gene1745 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08725 XM56_08730 XM56_08730 cbl cbl 1934572 1935528 + transcriptional regulator Cbl LysR-type transcriptional regulator similar to CysB%3B contains helix-turn-helix (HTH) motif%3B in Escherichia coli this protein regulates two operons consisting of ABC transporters that are part of the cys regulon%3B regulated by CysB%3B DNA-binding transcriptional activator for the ssuEADCB and tauABCD operons gene gene1746 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08730 XM56_08735 XM56_08735 XM56_08735 1935566 1937347 - nitrate/nitrite sensor protein NarX gene gene1747 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08735 XM56_08740 XM56_08740 XM56_08740 1937574 1938581 - ubiquinol oxidase subunit II gene gene1748 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08740 XM56_08745 XM56_08745 XM56_08745 1938584 1940032 - cytochrome D ubiquinol oxidase subunit I gene gene1749 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08745 XM56_08750 XM56_08750 XM56_08750 1940217 1941650 + GntR family transcriptional regulator gene gene1750 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08750 XM56_08755 XM56_08755 XM56_08755 1942243 1943487 + acetylornithine aminotransferase catalyzes the transamination of 2-N-succinylornithine and alpha-ketoglutarate into 2-N-succinylglutamate semialdehyde and glutamate%3B also functions as the catabolic acetylornithine aminotransferase catalyzing the formation of 2-N-acetylglutamate semialdehyde and glutamate from 2-N-acetylornithine and alpha-ketoglutarate gene gene1751 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08755 XM56_08760 XM56_08760 XM56_08760 1943530 1944567 + arginine succinyltransferase gene gene1752 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08760 XM56_08765 XM56_08765 astD astD 1944564 1946045 + succinylglutamate-semialdehyde dehydrogenase a high throughput screen identified this enzyme as an aldehyde dehydrogenase with broad substrate specificity%3B converts succinylglutamate semialdehyde and NAD to succinylglutamate and NADH gene gene1753 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08765 XM56_08770 XM56_08770 XM56_08770 1946088 1947431 + N-succinylarginine dihydrolase gene gene1754 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08770 XM56_08775 XM56_08775 XM56_08775 1947496 1948488 + succinylglutamate desuccinylase gene gene1755 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08775 XM56_08780 XM56_08780 XM56_08780 1949669 1950751 + porin gene gene1756 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08780 XM56_08785 XM56_08785 XM56_08785 1950830 1951315 - integrase gene gene1757 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08785 XM56_08790 XM56_08790 hypothetical protein hypothetical protein 1951439 1951627 - disrupted pseudogene gene1758 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08790 XM56_08795 XM56_08795 XM56_08795 1951783 1952046 - hypothetical protein gene gene1759 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08795 XM56_08800 XM56_08800 XM56_08800 1952180 1952989 - N-formylglutamate amidohydrolase gene gene1760 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08800 XM56_08805 XM56_08805 XM56_08805 1952986 1954206 - imidazolonepropionase catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate%2C the third step in the histidine degradation pathway gene gene1761 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08805 XM56_08810 XM56_08810 XM56_08810 1954342 1955109 - GntR family transcriptional regulator gene gene1762 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08810 XM56_08815 XM56_08815 XM56_08815 1955258 1956628 + N-formimino-L-glutamate deiminase catalyzes the deimination of N-formimino-L-glutamate to ammonia and N-formyl-L-glutamate gene gene1763 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08815 XM56_08820 XM56_08820 XM56_08820 1956628 1957200 + HutD family protein gene gene1764 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08820 XM56_08825 XM56_08825 XM56_08825 1957387 1958046 + zinc/cadmium-binding protein gene gene1765 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08825 XM56_08830 XM56_08830 autotransporter autotransporter 1958161 1958475 + disrupted pseudogene gene1766 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08830 XM56_08835 XM56_08835 XM56_08835 1958491 1959177 + autotransporter gene gene1767 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08835 XM56_08840 XM56_08840 XM56_08840 1959409 1960047 + hypothetical protein gene gene1768 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08840 XM56_08845 XM56_08845 XM56_08845 1960187 1961623 + transposase gene gene1769 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08845 XM56_08850 XM56_08850 XM56_08850 1961947 1962675 - lipoprotein gene gene1770 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08850 XM56_08855 XM56_08855 kbaY kbaY 1962863 1963741 - tagatose-bisphosphate aldolase catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1%2C6-bisphosphate%3B in enteric bacteria there are two D-tagatose 1%2C6-bisphosphate-specific aldolases: KbaY (also called AgaY)%2C involved in catabolism of N-acetyl-galactosamine and D-galactosamine%2C and GatY which is part of the galactitol catabolism pathway gene gene1771 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08855 XM56_08860 XM56_08860 XM56_08860 1963754 1964908 - aldose isomerase gene gene1772 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08860 XM56_08865 XM56_08865 XM56_08865 1965288 1965722 - PTS N-acetylgalactosamine transporter subunit IIA gene gene1773 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08865 XM56_08870 XM56_08870 XM56_08870 1965738 1966613 - PTS system N-acetylgalactosamine-specific transporter subunit IID catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IID with IIC forms the translocation channel%3B involved in N-acetylgalactosamine transport gene gene1774 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08870 XM56_08875 XM56_08875 XM56_08875 1966603 1967385 - PTS system N-acetylgalactosamine-specific transporter subunit IIC catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake%3Binvolved in N-acetylgalactosamine transport gene gene1775 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08875 XM56_08880 XM56_08880 XM56_08880 1967396 1967869 - PTS system N-acetylgalactosamine-specific transporter subunit IIB catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake%3B involved in N-acetylgalactosamine transport gene gene1776 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08880 XM56_08885 XM56_08885 XM56_08885 1967851 1969185 - tagatose-bisphosphate aldolase with KbaY catalyzes the formation of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate from tagatose-1%2C6-bisphosphate%3B subunit Z may act as a chaperone for the Y subunit gene gene1777 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08885 XM56_08890 XM56_08890 XM56_08890 1969436 1970245 + transcriptional regulator transcriptional repressor for the agaZVWA and agaSYBCDI operons gene gene1778 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08890 XM56_08895 XM56_08895 XM56_08895 1970327 1970971 + hypothetical protein gene gene1779 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08895 XM56_08900 XM56_08900 XM56_08900 1971442 1972491 - transposase gene gene1780 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08900 XM56_08905 XM56_08905 XM56_08905 1972805 1973443 + beta-fimbriae major subunit gene gene1781 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08905 XM56_08910 XM56_08910 XM56_08910 1973626 1974498 + 23S rRNA pseudouridylate synthase catalyzes the synthesis of pseudouridine from U-2604 in the 23S ribosomal RNA gene gene1782 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08910 XM56_08915 XM56_08915 XM56_08915 1974597 1975808 - sodium:glutamate symporter is involved with the sodium-dependent uptake of glutamate gene gene1783 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08915 XM56_08920 XM56_08920 XM56_08920 1976242 1976436 - hypothetical protein gene gene1784 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08920 XM56_08925 XM56_08925 XM56_08925 1976563 1976925 + transposase gene gene1785 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08925 XM56_08930 XM56_08930 XM56_08930 1977161 1977502 + transposase gene gene1786 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08930 XM56_08935 XM56_08935 XM56_08935 1977981 1978952 - tRNA methyltransferase catalyzes the conversion of 5-hydroxyuridine to 5-methoxyuridine in tRNA gene gene1787 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08935 XM56_08940 XM56_08940 XM56_08940 1978949 1979749 - tRNA methyltransferase gene gene1788 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08940 XM56_08945 XM56_08945 XM56_08945 1979939 1980334 - membrane protein gene gene1789 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08945 XM56_08950 XM56_08950 XM56_08950 1980526 1981341 - hypothetical protein gene gene1790 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08950 XM56_08955 XM56_08955 XM56_08955 1981512 1982087 - hydrolase gene gene1791 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08955 XM56_08960 XM56_08960 XM56_08960 1982327 1982557 + FmdB family transcriptional regulator gene gene1792 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08960 XM56_08965 XM56_08965 XM56_08965 1982640 1984436 + aspartyl-tRNA synthetase gene gene1793 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08965 XM56_08970 XM56_08970 nudB nudB 1984524 1985006 + dihydroneopterin triphosphate pyrophosphatase catalyzes the formation of dihydroneopterin phosphate from dihydroneopterin triphosphate gene gene1794 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08970 XM56_08975 XM56_08975 XM56_08975 1985033 1985776 + hypothetical protein gene gene1795 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08975 XM56_08980 XM56_08980 ruvC ruvC 1986141 1986662 + Holliday junction resolvase endonuclease%3B resolves Holliday structures%3B forms a complex of RuvABC%3B the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration%3B RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity gene gene1796 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08980 XM56_08985 XM56_08985 ruvA ruvA 1986785 1987402 + ATP-dependent DNA helicase RuvA plays an essential role in ATP-dependent branch migration of the Holliday junction gene gene1797 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08985 XM56_08990 XM56_08990 ruvB ruvB 1987438 1988442 + ATP-dependent DNA helicase RuvB promotes strand exchange during homologous recombination%3B RuvAB complex promotes branch migration%3B RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences%3B forms hexameric rings around opposite DNA arms%3B requires ATP for branch migration and orientation of RuvAB complex determines direction of migration gene gene1798 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08990 XM56_08995 XM56_08995 tppB tppB 1988493 1989974 - peptide ABC transporter permease mutations in this gene confer resistance to the toxic peptide alafosfalin in Salmonella typhimurium%3B member of proton-dependent oligopeptide transport (POT) system family%3B in Escherichia coli this gene is regulated by OmpR although not via osmoregulation gene gene1799 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_08995 XM56_09000 XM56_09000 znuB znuB 1990241 1991026 - high-affinity zinc transporter membrane component involved in transport of zinc(II) with ZnuA and C gene gene1800 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09000 XM56_09005 XM56_09005 znuC znuC 1991023 1991781 - zinc ABC transporter ATPase involved in transport of zinc(II) with ZnuA and C gene gene1801 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09005 XM56_09010 XM56_09010 znuA znuA 1991857 1992819 + zinc ABC transporter substrate-binding protein involved in transport of zinc(II) with ZnuA and C gene gene1802 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09010 XM56_09015 XM56_09015 XM56_09015 1992834 1994150 + peptidase gene gene1803 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09015 XM56_09020 XM56_09020 XM56_09020 1994234 1995199 + lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase gene gene1804 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09020 XM56_09025 XM56_09025 XM56_09025 1995602 1996864 + hypothetical protein gene gene1805 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09025 XM56_09030 XM56_09030 XM56_09030 1996978 1998180 - transposase gene gene1806 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09030 XM56_09035 XM56_09035 XM56_09035 1998324 1999766 - pyruvate kinase catalyzes the formation of phosphoenolpyruvate from pyruvate gene gene1807 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09035 XM56_09040 XM56_09040 XM56_09040 1999986 2000855 - transcriptional regulator Represses the expression of the zwf%2C eda%2C glp and gap gene gene1808 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09040 XM56_09045 XM56_09045 XM56_09045 2001208 2002692 + glucose-6-phosphate dehydrogenase catalyzes the formation of D-glucono-1%2C5-lactone 6-phosphate from D-glucose 6-phosphate gene gene1809 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09045 XM56_09050 XM56_09050 XM56_09050 2002998 2003639 + keto-deoxy-phosphogluconate aldolase catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate%3B or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate gene gene1810 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09050 XM56_09055 XM56_09055 XM56_09055 2004324 2004701 + spermidine export protein MdtJ gene gene1811 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09055 XM56_09060 XM56_09060 XM56_09060 2004688 2005017 + multidrug transporter with MdtJ is involved in resistance to deoxycholate%2C nalidixic acid%2C fosfomycin%2C and SDS gene gene1812 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09060 XM56_09065 XM56_09065 XM56_09065 2005179 2005523 - endoribonuclease L-PSP gene gene1813 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09065 XM56_09070 XM56_09070 XM56_09070 2005652 2007556 + ATP-dependent helicase gene gene1814 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09070 XM56_09075 XM56_09075 XM56_09075 2007631 2008329 + hypothetical protein gene gene1815 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09075 XM56_09080 XM56_09080 XM56_09080 2008432 2009037 + membrane protein gene gene1816 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09080 XM56_09085 XM56_09085 XM56_09085 2009378 2011072 + long-chain fatty acid--CoA ligase Activates fatty acids by binding to coenzyme A gene gene1817 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09085 XM56_09090 XM56_09090 XM56_09090 2011167 2012288 + ribonuclease D gene gene1818 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09090 XM56_09095 XM56_09095 minE minE 2012418 2012687 - cell division topological specificity factor MinE works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell gene gene1819 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09095 XM56_09100 XM56_09100 XM56_09100 2012691 2013503 - cell division inhibitor MinD ATPase%3B with MinC inhibits cell division by blocking formation of the polar Z ring septums gene gene1820 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09100 XM56_09105 XM56_09105 minC minC 2013529 2014215 - septum formation inhibitor blocks the formation of polar Z-ring septums gene gene1821 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09105 XM56_09110 XM56_09110 XM56_09110 2014766 2015128 + hypothetical protein gene gene1822 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09110 XM56_09115 XM56_09115 XM56_09115 2015406 2015678 + hypothetical protein gene gene1823 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09115 XM56_09120 XM56_09120 XM56_09120 2015717 2016787 + lytic murein transglycosylase gene gene1824 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09120 XM56_09125 XM56_09125 XM56_09125 2016868 2017524 + hypothetical protein gene gene1825 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09125 XM56_09130 XM56_09130 XM56_09130 2017639 2018085 + hypothetical protein gene gene1826 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09130 XM56_09135 XM56_09135 XM56_09135 2018150 2018506 + hypothetical protein gene gene1827 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09135 XM56_09140 XM56_09140 XM56_09140 2019047 2019481 - hypothetical protein gene gene1828 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09140 XM56_09145 XM56_09145 XM56_09145 2020213 2021058 - membrane protein gene gene1829 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09145 XM56_09150 XM56_09150 XM56_09150 2021292 2021549 + hypothetical protein gene gene1830 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09150 XM56_09155 XM56_09155 XM56_09155 2021711 2022751 + mechanosensitive ion channel protein MscS gene gene1831 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09155 XM56_09160 XM56_09160 XM56_09160 2022932 2023567 + glutathione S-transferase catalyzes the formation of 2%2C4-dinitrophenyl-S-glutathione from 1-chloro-2%2C4-dinitrobenzene and glutathione gene gene1832 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09160 XM56_09165 XM56_09165 XM56_09165 2023636 2024184 + GCN5 family acetyltransferase gene gene1833 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09165 XM56_09170 XM56_09170 XM56_09170 2024685 2024918 + DNA-binding protein gene gene1834 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09170 XM56_09175 XM56_09175 XM56_09175 2025641 2026030 + RNA-binding protein gene gene1835 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09175 XM56_09180 XM56_09180 XM56_09180 2026148 2026390 - hypothetical protein gene gene1836 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09180 XM56_09185 XM56_09185 XM56_09185 2026503 2028212 - diguanylate cyclase gene gene1837 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09185 XM56_09190 XM56_09190 XM56_09190 2028435 2029445 - spore coat protein U gene gene1838 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09190 XM56_09195 XM56_09195 XM56_09195 2029476 2031917 - membrane protein gene gene1839 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09195 XM56_09200 XM56_09200 XM56_09200 2032004 2032753 - molecular chaperone gene gene1840 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09200 XM56_09205 XM56_09205 XM56_09205 2032800 2033357 - spore coat protein U gene gene1841 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09205 XM56_09210 XM56_09210 XM56_09210 2033369 2033926 - spore coat protein U gene gene1842 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09210 XM56_09215 XM56_09215 XM56_09215 2033932 2034468 - spore coat protein U gene gene1843 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09215 XM56_09220 XM56_09220 XM56_09220 2034796 2036220 - MFS transporter gene gene1844 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09220 XM56_09225 XM56_09225 XM56_09225 2036348 2037268 + LysR family transcriptional regulator gene gene1845 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09225 XM56_09230 XM56_09230 XM56_09230 2037281 2039911 - hypothetical protein gene gene1846 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09230 XM56_09235 XM56_09235 XM56_09235 2039880 2041127 - membrane protein gene gene1847 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09235 XM56_09240 XM56_09240 XM56_09240 2041368 2041865 + Free methionine-R-sulfoxide reductase gene gene1848 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09240 XM56_09245 XM56_09245 XM56_09245 2041961 2042689 + prop expression regulator affects solute and DNA transport through an unknown mechanism gene gene1849 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09245 XM56_09250 XM56_09250 XM56_09250 2042709 2044784 + carboxy-terminal protease Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3 gene gene1850 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09250 XM56_09255 XM56_09255 XM56_09255 2045081 2045962 + heat shock protein HtpX metalloprotease gene gene1851 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09255 XM56_09260 XM56_09260 XM56_09260 2045997 2046122 + DNA-binding protein gene gene1852 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09260 XM56_09265 XM56_09265 multidrug MFS transporter multidrug MFS transporter 2046134 2047515 - disrupted pseudogene gene1853 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09265 XM56_09270 XM56_09270 XM56_09270 2047840 2049006 + oligogalacturonate lyase gene gene1854 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09270 XM56_09275 XM56_09275 XM56_09275 2049193 2049984 + transcriptional regulator regulates the genes involved in 2-keto-3-deoxy gluconate transport and catabolism gene gene1855 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09275 XM56_09280 XM56_09280 XM56_09280 2050260 2051111 + N-acetylmuramoyl-L-alanine amidase gene gene1856 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09280 XM56_09285 XM56_09285 XM56_09285 2051192 2052583 - L-cystine transporter tcyP gene gene1857 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09285 XM56_09290 XM56_09290 XM56_09290 2052802 2053350 - hypothetical protein gene gene1858 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09290 XM56_09295 XM56_09295 XM56_09295 2053434 2053634 + hypothetical protein gene gene1859 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09295 XM56_09300 XM56_09300 XM56_09300 2053708 2054406 - porin gene gene1860 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09300 XM56_09305 XM56_09305 XM56_09305 2054711 2056003 - sugar ABC transporter substrate-binding protein gene gene1861 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09305 XM56_09310 XM56_09310 XM56_09310 2056019 2057146 - sugar ABC transporter ATP-binding protein gene gene1862 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09310 XM56_09315 XM56_09315 XM56_09315 2057160 2058077 - sugar ABC transporter permease gene gene1863 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09315 XM56_09320 XM56_09320 XM56_09320 2058070 2058960 - sugar ABC transporter permease gene gene1864 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09320 XM56_09325 XM56_09325 XM56_09325 2059001 2060668 - pectate lyase gene gene1865 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09325 XM56_09330 XM56_09330 XM56_09330 2060995 2061756 - 2-deoxy-D-gluconate 3-dehydrogenase catalyzes the formation of 3-dehydro-2-deoxy-D-gluconate from 2-deoxy-D-gluconate gene gene1866 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09330 XM56_09335 XM56_09335 XM56_09335 2061868 2062704 - 5-keto-4-deoxyuronate isomerase 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase%3B catalyzes the interconversion of 4-deoxy-L-threo-5-hexosulose uronate to 3-deoxy-D-glycero-2%2C5-hexodiulosonate gene gene1867 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09335 XM56_09340 XM56_09340 XM56_09340 2062942 2063274 + pectin degradation protein gene gene1868 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09340 XM56_09345 XM56_09345 XM56_09345 2063385 2064050 - 2-deoxyglucose-6-phosphatase YniC%3B catalyzes the dephosphorylation of 2-deoxyglucose 6-phosphate%2C mannose 6-phosphate and p-nitrophenyl phosphate gene gene1869 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09345 XM56_09350 XM56_09350 XM56_09350 2064300 2064854 + membrane protein gene gene1870 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09350 XM56_09355 XM56_09355 XM56_09355 2065063 2065953 + LysR family transcriptional regulator gene gene1871 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09355 XM56_09360 XM56_09360 XM56_09360 2065950 2067431 - acetyl-CoA hydrolase gene gene1872 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09360 XM56_09365 XM56_09365 XM56_09365 2067457 2068242 - methylmalonyl-CoA decarboxylase catalyzes the formation of propanoyl-CoA from methylmalonyl-CoA gene gene1873 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09365 XM56_09370 XM56_09370 XM56_09370 2068256 2069251 - protein kinase gene gene1874 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09370 XM56_09375 XM56_09375 XM56_09375 2069244 2071388 - methylmalonyl-CoA mutase gene gene1875 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09375 XM56_09380 XM56_09380 XM56_09380 2071676 2072545 - hypothetical protein gene gene1876 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09380 XM56_09385 XM56_09385 XM56_09385 2073177 2074052 - iron ABC transporter permease gene gene1877 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09385 XM56_09390 XM56_09390 XM56_09390 2074049 2074933 - membrane protein gene gene1878 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09390 XM56_09395 XM56_09395 XM56_09395 2074933 2075823 - iron ABC transporter permease gene gene1879 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09395 XM56_09400 XM56_09400 XM56_09400 2075820 2076788 - iron-binding protein gene gene1880 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09400 XM56_09405 XM56_09405 XM56_09405 2077000 2077662 + lytic transglycosylase gene gene1881 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09405 XM56_09410 XM56_09410 XM56_09410 2078025 2078708 - hypothetical protein gene gene1882 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09410 XM56_09415 XM56_09415 XM56_09415 2079149 2079400 + hypothetical protein gene gene1883 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09415 XM56_09420 XM56_09420 steroid delta-isomerase steroid delta-isomerase 2079489 2079827 + disrupted pseudogene gene1884 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09420 XM56_09425 XM56_09425 XM56_09425 2079873 2080109 + Pathogenicity locus gene gene1885 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09425 XM56_09430 XM56_09430 XM56_09430 2080175 2080354 - hypothetical protein gene gene1886 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09430 XM56_09435 XM56_09435 XM56_09435 2080879 2081592 + membrane protein gene gene1887 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09435 XM56_09440 XM56_09440 XM56_09440 2081712 2081924 - hypothetical protein gene gene1888 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09440 XM56_09445 XM56_09445 thrS thrS 2082248 2084176 + threonine--tRNA ligase catalyzes a two-step reaction%2C first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr) gene gene1889 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09445 XM56_09450 XM56_09450 XM56_09450 2084381 2084731 + translation initiation factor IF-3 gene gene1890 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09450 XM56_09455 XM56_09455 XM56_09455 2084828 2085025 + 50S ribosomal protein L35 gene gene1891 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09455 XM56_09460 XM56_09460 rplT rplT 2085063 2085419 + 50S ribosomal protein L20 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit gene gene1892 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09460 XM56_09465 XM56_09465 XM56_09465 2085884 2086867 + phenylalanyl-tRNA synthetase gene gene1893 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09465 XM56_09470 XM56_09470 pheT pheT 2086882 2089269 + phenylalanine--tRNA ligase catalyzes a two-step reaction%2C first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B forms a tetramer of alpha(2)beta(2)%3B binds two magnesium ions per tetramer%3B type 2 subfamily gene gene1894 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09470 XM56_09475 XM56_09475 ihfA ihfA 2089274 2089570 + integration host factor subunit alpha This protein is one of the two subunits of integration host factor%2C a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control gene gene1895 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09475 XM56_09480 XM56_09480 XM56_09480 2089783 2090079 - hypothetical protein gene gene1896 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09480 XM56_09485 XM56_09485 XM56_09485 2090950 2091444 + hypothetical protein gene gene1897 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09485 XM56_09490 XM56_09490 XM56_09490 2091617 2092624 + Vitamin B12 import system permease BtuC gene gene1898 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09490 XM56_09495 XM56_09495 btuE btuE 2092694 2093248 + glutathione peroxidase similar to glutathione peroxidase%3B member of the btuCED operon which is required for vitamin B12 transport across the inner membrane gene gene1899 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09495 XM56_09500 XM56_09500 XM56_09500 2093273 2094031 + vitamin B12 ABC transporter ATPase gene gene1900 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09500 XM56_09505 XM56_09505 XM56_09505 2094377 2095525 + UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase catalyzes the conversion of UDP-4-keto-arabinose to UDP-4-amino-4-deoxy-L-arabinose gene gene1901 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09505 XM56_09510 XM56_09510 XM56_09510 2095518 2096501 + UDP phosphate 4-deoxy-4-formamido-L-arabinose transferase catalyzes the transfer of 4-deoxy-4-formamido-L-arabinose from UDP to undecaprenyl phosphate gene gene1902 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09510 XM56_09515 XM56_09515 XM56_09515 2096498 2098531 + UDP-4-amino-4-deoxy-L-arabinose formyltransferase Bifunctional polymyxin resistance arnA protein%3B catalyzes the decarboxylation of UDP-glucuronic acid to UDP-4-keto-arabinose and the addition of a formyl group to UDP-4-amino-4-deoxy-L-arabinose to form UDP-L-4-formamido-arabinose%3B active in certain mutant strains gene gene1903 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09515 XM56_09520 XM56_09520 XM56_09520 2098528 2099430 + 4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase catalyzes the formation of 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol from 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol gene gene1904 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09520 XM56_09525 XM56_09525 arnT arnT 2099430 2101094 + 4-amino-4-deoxy-L-arabinose transferase catalyzes the addition of 4-amino-4-deoxy-L-arabinose to lipid A gene gene1905 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09525 XM56_09530 XM56_09530 XM56_09530 2101091 2101435 + 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase gene gene1906 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09530 XM56_09535 XM56_09535 XM56_09535 2101432 2101818 + 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase gene gene1907 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09535 XM56_09540 XM56_09540 XM56_09540 2102081 2102545 + endopeptidase gene gene1908 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09540 XM56_09545 XM56_09545 lplA lplA 2102866 2103882 + lipoate--protein ligase Catalyzes both the ATP-dependent activation of exogenously supplied lipoate to lipoyl-AMP and the transfer of the activated lipoyl on the lipoate-dependent enzymes. Creates an amide linkage that joins the free carboxyl group of lipoic acid to the epsilon-amino group of a specific lysine residue in lipoyl domain of apoproteins gene gene1909 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09545 XM56_09550 XM56_09550 XM56_09550 2103882 2105381 + hypothetical protein gene gene1910 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09550 XM56_09555 XM56_09555 XM56_09555 2105440 2106273 - hemin ABC transporter substrate-binding protein gene gene1911 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09555 XM56_09560 XM56_09560 XM56_09560 2106266 2107327 - hemin transporter gene gene1912 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09560 XM56_09565 XM56_09565 XM56_09565 2107439 2109475 - ligand-gated channel protein gene gene1913 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09565 XM56_09570 XM56_09570 XM56_09570 2109591 2109770 - hemin transporter gene gene1914 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09570 XM56_09575 XM56_09575 XM56_09575 2110025 2111074 - phospho-2-dehydro-3-deoxyheptonate aldolase gene gene1915 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09575 XM56_09580 XM56_09580 XM56_09580 2111298 2112119 - phosphoenolpyruvate synthase regulatory protein gene gene1916 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09580 XM56_09585 XM56_09585 XM56_09585 2112406 2114787 + phosphoenolpyruvate synthase catalyzes the formation of phosphoenolpyruvate from pyruvate gene gene1917 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09585 XM56_09590 XM56_09590 XM56_09590 2115347 2116450 - hypothetical protein YdiK%3B inner membrane protein%3B ydiK promoter presents a PurR sequence%2C suggesting that its expression is purine-regulated%3B unknown function gene gene1918 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09590 XM56_09595 XM56_09595 XM56_09595 2116897 2119953 + membrane protein gene gene1919 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09595 XM56_09600 XM56_09600 XM56_09600 2120098 2121147 + transposase gene gene1920 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09600 XM56_09605 XM56_09605 XM56_09605 2121552 2121974 + thioesterase required for efficient enterobactin production gene gene1921 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09605 XM56_09610 XM56_09610 sufA sufA 2122724 2123095 + iron-sulfur cluster assembly scaffold protein functions as a scaffold on which iron-sulfur clusters ([2Fe-2S]%3B [4Fe-4S]) are assembled%3B forms a homodimer%3B similar to IscA protein gene gene1922 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09610 XM56_09615 XM56_09615 XM56_09615 2123110 2124621 + cysteine desulfurase with SufCD activates cysteine desulfurase SufS gene gene1923 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09615 XM56_09620 XM56_09620 sufC sufC 2124678 2125424 + cysteine desulfurase part of SUF system involved in inserting iron-sulfur clusters into proteins%3B in Escherichia coli this protein forms a complex with SufBD%3B the SufBCD complex stimulates the cysteine desulfurase SufS in conjunction with SufE gene gene1924 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09620 XM56_09625 XM56_09625 XM56_09625 2125399 2126712 + cysteine desulfurase gene gene1925 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09625 XM56_09630 XM56_09630 XM56_09630 2126709 2127959 + cysteine sulfinate desulfinase gene gene1926 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09630 XM56_09635 XM56_09635 XM56_09635 2128043 2128465 + cysteine desufuration protein SufE Acts with SufS to catalyze the formation of L-alanine from L-cysteine gene gene1927 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09635 XM56_09640 XM56_09640 XM56_09640 2128732 2129799 + peptidoglycan-binding protein gene gene1928 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09640 XM56_09645 XM56_09645 XM56_09645 2130032 2130268 - murein lipoprotein major outer membrane lipoprotein%3B interacts with peptidoglycan to maintain the integrity of the cell envelope gene gene1929 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09645 XM56_09650 XM56_09650 XM56_09650 2130588 2132000 - pyruvate kinase catalyzes the formation of phosphoenolpyruvate from pyruvate gene gene1930 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09650 XM56_09655 XM56_09655 XM56_09655 2132518 2132594 - tRNA-Val tRNA gene1931 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09655 XM56_09660 XM56_09660 XM56_09660 2132943 2134316 - multidrug transporter NorM%3B MdtK%3B functions as a Na(+)/drug antiporter%3B inactivation in Vibrio cholerae results in susceptibility to fluoroquinolones gene gene1932 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09660 XM56_09665 XM56_09665 XM56_09665 2134691 2135344 + riboflavin synthase subunit alpha catalyzes the formation of riboflavin from 6%2C7-dimethyl-8-(1-D-ribityl)lumazine gene gene1933 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09665 XM56_09670 XM56_09670 XM56_09670 2135404 2136555 - cyclopropane fatty acyl phospholipid synthase catalyzes the transfer of a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge gene gene1934 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09670 XM56_09675 XM56_09675 XM56_09675 2136863 2138080 - transporter uncharacterized member of the major facilitator superfamily (MFS) gene gene1935 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09675 XM56_09680 XM56_09680 XM56_09680 2138371 2139309 + transcriptional regulator gene gene1936 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09680 XM56_09685 XM56_09685 XM56_09685 2139346 2140371 - transcriptional regulator binds to the purF operator and coregulates other genes for de novo purine nucleotide synthesis%3B is involved in regulation of purB%2C purC%2C purEK%2C purHD%2C purL%2C purMN and guaBA expression%3B binds hypoxanthine and guanine as inducers gene gene1937 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09685 XM56_09690 XM56_09690 XM56_09690 2140897 2141475 - superoxide dismutase SodB%3B iron binding%3B present under aerobic and anaerobic conditions%3B destroys free radicals gene gene1938 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09690 XM56_09695 XM56_09695 XM56_09695 2141726 2142616 - hydrolase gene gene1939 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09695 XM56_09700 XM56_09700 XM56_09700 2143050 2143400 + glutaredoxin gene gene1940 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09700 XM56_09705 XM56_09705 XM56_09705 2143469 2144167 - ribonuclease T Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A) gene gene1941 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09705 XM56_09710 XM56_09710 XM56_09710 2144243 2144650 - glyoxalase I Ni-dependent%3B catalyzes the formation of S-lactoylglutathione from methylglyoxal and glutathione gene gene1942 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09710 XM56_09715 XM56_09715 XM56_09715 2144832 2145929 - N-ethylmaleimide reductase FMN-linked%3B catalyzes the formation of N-ethylsuccinimide from N-ethylmaleimide gene gene1943 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09715 XM56_09720 XM56_09720 XM56_09720 2145999 2146607 - transcriptional repressor NemR represses nemA which is involved in degradation of N-ethylmaleimide gene gene1944 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09720 XM56_09725 XM56_09725 XM56_09725 2146729 2148360 - hydrolase gene gene1945 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09725 XM56_09730 XM56_09730 XM56_09730 2148651 2148890 + oxidoreductase gene gene1946 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09730 XM56_09735 XM56_09735 XM56_09735 2149027 2149923 + oxidoreductase gene gene1947 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09735 XM56_09740 XM56_09740 XM56_09740 2149948 2151972 - fusaric acid resistance protein gene gene1948 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09740 XM56_09745 XM56_09745 XM56_09745 2151975 2152832 - membrane protein gene gene1949 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09745 XM56_09750 XM56_09750 XM56_09750 2152839 2153075 - membrane protein gene gene1950 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09750 XM56_09755 XM56_09755 XM56_09755 2153256 2153687 + transcriptional regulator SlyA Transcription regulator that can both activate or repress expression gene gene1951 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09755 XM56_09760 XM56_09760 XM56_09760 2153808 2154275 - membrane protein gene gene1952 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09760 XM56_09765 XM56_09765 anmK anmK 2154720 2155832 + anhydro-N-acetylmuramic acid kinase catalyzes hydrolysis of 1%2C6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate%3B involved in murein recycling gene gene1953 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09765 XM56_09770 XM56_09770 XM56_09770 2155888 2156187 + membrane-bound lysozyme inhibitor of C-type lysozyme gene gene1954 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09770 XM56_09775 XM56_09775 XM56_09775 2156295 2156948 + pyridoxamine 5'-phosphate oxidase catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate gene gene1955 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09775 XM56_09780 XM56_09780 XM56_09780 2157052 2158338 + tyrosyl-tRNA synthetase gene gene1956 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09780 XM56_09785 XM56_09785 XM56_09785 2158413 2159273 + pyridoxamine kinase catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal gene gene1957 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09785 XM56_09790 XM56_09790 XM56_09790 2159325 2159933 - glutathione S-transferase gene gene1958 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09790 XM56_09795 XM56_09795 XM56_09795 2160115 2160378 - hypothetical protein gene gene1959 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09795 XM56_09800 XM56_09800 XM56_09800 2160564 2161151 - membrane protein gene gene1960 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09800 XM56_09805 XM56_09805 XM56_09805 2161376 2161729 + bleomycin resistance protein gene gene1961 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09805 XM56_09810 XM56_09810 tppB tppB 2161931 2163454 - peptide ABC transporter permease mutations in this gene confer resistance to the toxic peptide alafosfalin in Salmonella typhimurium%3B member of proton-dependent oligopeptide transport (POT) system family%3B in Escherichia coli this gene is regulated by OmpR although not via osmoregulation gene gene1962 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09810 XM56_09815 XM56_09815 XM56_09815 2163993 2164898 + LysR family transcriptional regulator gene gene1963 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09815 XM56_09820 XM56_09820 hypothetical protein hypothetical protein 2164920 2166131 - disrupted pseudogene gene1964 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09820 XM56_09825 XM56_09825 XM56_09825 2166143 2166367 - hypothetical protein gene gene1965 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09825 XM56_09830 XM56_09830 XM56_09830 2166531 2167346 - peptide ABC transporter ATP-binding protein gene gene1966 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09830 XM56_09835 XM56_09835 XM56_09835 2167346 2168338 - peptide ABC transporter ATP-binding protein involved in resistance to antimibial peptides gene gene1967 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09835 XM56_09840 XM56_09840 XM56_09840 2168338 2169228 - peptide ABC transporter permease gene gene1968 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09840 XM56_09845 XM56_09845 XM56_09845 2169215 2170180 - peptide ABC transporter permease gene gene1969 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09845 XM56_09850 XM56_09850 XM56_09850 2170177 2171850 - ABC transporter substrate-binding protein gene gene1970 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09850 XM56_09855 XM56_09855 XM56_09855 2172521 2173399 + enterotoxin gene gene1971 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09855 XM56_09860 XM56_09860 XM56_09860 2173439 2173786 + hypothetical protein gene gene1972 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09860 XM56_09865 XM56_09865 pspF pspF 2173831 2174841 - phage shock protein transcriptional activator for pspABCE which are induced in response to phage proteins%2C membrane altering stresses%2C and impaired proton expor gene gene1973 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09865 XM56_09870 XM56_09870 XM56_09870 2175031 2175696 + phage shock protein involved in maintaining membrane potential under membrane stress conditions%3B also acts as a negative transcriptional regulator of the phage shock protein (psp) operon(pspABCDE) by regulating the transcriptional activator PspF gene gene1974 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09870 XM56_09875 XM56_09875 pspB pspB 2175858 2176085 + phage shock protein DNA-binding transcriptional regulator%3B acts together with PspC to induce psp operon during infection with phage%2C exposure to ethanol or osmotic shock%3B forms a complex with PspA and C%3B PspC is required for PspAB binding gene gene1975 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09875 XM56_09880 XM56_09880 XM56_09880 2176085 2176489 + transcriptional regulator with PsbB forms toxin/antitoxin pair%3B activates the psp operon in response to phage infection%2C exposure to ethanol or osmotic shock gene gene1976 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09880 XM56_09885 XM56_09885 XM56_09885 2176535 2176774 + phage-shock protein gene gene1977 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09885 XM56_09890 XM56_09890 XM56_09890 2176755 2178152 + hypothetical protein gene gene1978 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09890 XM56_09895 XM56_09895 XM56_09895 2178149 2179213 + hypothetical protein gene gene1979 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09895 XM56_09900 XM56_09900 XM56_09900 2179216 2179674 - RES domain protein gene gene1980 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09900 XM56_09905 XM56_09905 XM56_09905 2179730 2180176 - toxin-antitoxin system antitoxin component gene gene1981 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09905 XM56_09910 XM56_09910 XM56_09910 2180496 2182073 + transcriptional regulator regulates genes involved in the biosynthesis and transport of aromatic amino acids gene gene1982 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09910 XM56_09915 XM56_09915 tpx tpx 2182320 2182823 - peroxidase antioxidant activity%3B thioredoxin-dependent thiol peroxidase%3B forms homodimers in solution%3B shows substrate specificity to alkyl hydroperoxides%3B periplasmic protein gene gene1983 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09915 XM56_09920 XM56_09920 XM56_09920 2182976 2183947 + L-alanine-DL-glutamate epimerase catalyzes the epimerization of L-alanyl-D-glutamate to L-alanyl-L-glutamate gene gene1984 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09920 XM56_09925 XM56_09925 XM56_09925 2183944 2184651 - murein peptide amidase A gene gene1985 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09925 XM56_09930 XM56_09930 XM56_09930 2184937 2186553 + peptide ABC transporter substrate-binding protein is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate gene gene1986 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09930 XM56_09935 XM56_09935 zntB zntB 2186990 2187973 + zinc transporter gene gene1987 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09935 XM56_09940 XM56_09940 XM56_09940 2188293 2189234 - tRNA 2-thiocytidine biosynthesis protein TtcA TtcA%3B YdaO%3B catalyzes the thiolation of cytosine 32 in specific tRNAs%3B forms 2-thiocytidine (s(2)C) gene gene1988 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09940 XM56_09945 XM56_09945 XM56_09945 2189373 2190227 - phosphatidylinositol diacylglycerol-lyase gene gene1989 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09945 XM56_09950 XM56_09950 XM56_09950 2190424 2193957 - pyruvate-flavodoxin oxidoreductase gene gene1990 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09950 XM56_09955 XM56_09955 XM56_09955 2194335 2194667 + multidrug DMT transporter gene gene1991 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09955 XM56_09960 XM56_09960 XM56_09960 2194813 2195472 - methyltransferase gene gene1992 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09960 XM56_09965 XM56_09965 XM56_09965 2195711 2196028 + lipoprotein gene gene1993 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09965 XM56_09970 XM56_09970 XM56_09970 2196159 2197151 - lactate dehydrogenase fermentative%3B catalyzes the formationof pyruvate from lactate gene gene1994 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09970 XM56_09975 XM56_09975 XM56_09975 2197425 2200058 + hypothetical protein gene gene1995 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09975 XM56_09980 XM56_09980 XM56_09980 2200055 2200249 + hypothetical protein gene gene1996 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09980 XM56_09985 XM56_09985 XM56_09985 2200259 2200630 + hypothetical protein gene gene1997 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09985 XM56_09990 XM56_09990 XM56_09990 2200960 2201565 - FMN-dependent NADH-azoreductase FMN-dependent%3B requires NADH%3B catalyzes the cleavage of azo bond in aromatic azo compounds gene gene1998 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09990 XM56_09995 XM56_09995 XM56_09995 2201955 2205797 + ATP-dependent helicase HrpA involved in the post-transcriptional processing of the daa operon mRNA%2C which encodes proteins involved in fimbrial biogenesis of an enteropathogenic E. coli strain gene gene1999 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_09995 XM56_10000 XM56_10000 XM56_10000 2206135 2206464 + hypothetical protein gene gene2000 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10000 XM56_10005 XM56_10005 XM56_10005 2206461 2206784 + DNA-binding protein gene gene2001 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10005 XM56_10010 XM56_10010 XM56_10010 2206840 2207682 - serine protease gene gene2002 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10010 XM56_10015 XM56_10015 XM56_10015 2208083 2208358 - acid-shock protein gene gene2003 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10015 XM56_10020 XM56_10020 XM56_10020 2208754 2210235 - peptidase M32 gene gene2004 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10020 XM56_10025 XM56_10025 XM56_10025 2210283 2211590 - sensor protein RstB gene gene2005 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10025 XM56_10030 XM56_10030 XM56_10030 2211587 2212315 - transcriptional regulator response regulator in two-component regulatory system with RstB gene gene2006 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10030 XM56_10035 XM56_10035 XM56_10035 2212558 2212974 + hypothetical protein gene gene2007 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10035 XM56_10040 XM56_10040 XM56_10040 2213045 2214436 - arginine:ornithine antiporter gene gene2008 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10040 XM56_10045 XM56_10045 XM56_10045 2214699 2215652 - hypothetical protein gene gene2009 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10045 XM56_10050 XM56_10050 XM56_10050 2215914 2216093 + hypothetical protein gene gene2010 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10050 XM56_10055 XM56_10055 pntA pntA 2216185 2217711 + NAD(P) transhydrogenase subunit alpha forms a tetramer composed of 2 alpha subunits and 2 beta subunits in the inner membrane%3B involved in catalyzing transfer of hydride ion equivalents between NAD and NADP%3B stereospecific (AB-specific)%3B functions as a proton pump by translocating protons from cytoplasm to periplasm gene gene2011 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10055 XM56_10060 XM56_10060 pntB pntB 2217832 2219223 + pyridine nucleotide transhydrogenase catalyzes reversible transfer of hydride ion equivalent between NAD and NADP%3B membrane-bound proton pump that translocates protons from cytosolic to periplasmic side of the inner membrane%3B forms a tetramer composed of two alpha and 2 beta subunits%3B AB-stereospecific enzyme gene gene2012 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10060 XM56_10065 XM56_10065 XM56_10065 2219744 2220700 - universal stress protein UspE with UspC and UspD is involved in resistance to UV irradiation gene gene2013 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10065 XM56_10070 XM56_10070 XM56_10070 2220937 2221692 - transcriptional regulator Global transcription factor that controls the expression of over 100 target genes in response to anoxia gene gene2014 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10070 XM56_10075 XM56_10075 XM56_10075 2221765 2222283 - cysteine methyltransferase gene gene2015 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10075 XM56_10080 XM56_10080 XM56_10080 2222534 2223322 + N-formylglutamate amidohydrolase gene gene2016 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10080 XM56_10085 XM56_10085 XM56_10085 2223479 2223997 + hypothetical protein gene gene2017 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10085 XM56_10090 XM56_10090 XM56_10090 2224094 2224567 + 2-hydroxyacid dehydrogenase gene gene2018 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10090 XM56_10095 XM56_10095 XM56_10095 2224773 2225513 + 3-ketoacyl-ACP reductase gene gene2019 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10095 XM56_10100 XM56_10100 XM56_10100 2225692 2227122 + alkaline phosphatase gene gene2020 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10100 XM56_10105 XM56_10105 XM56_10105 2227402 2228331 + ribokinase gene gene2021 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10105 XM56_10110 XM56_10110 sugar:proton symporter sugar:proton symporter 2228333 2229568 + disrupted pseudogene gene2022 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10110 XM56_10115 XM56_10115 arpA protein arpA protein 2229567 2229914 - disrupted pseudogene gene2023 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10115 XM56_10120 XM56_10120 XM56_10120 2230316 2232691 + hypothetical protein gene gene2024 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10120 XM56_10125 XM56_10125 XM56_10125 2232801 2233475 + dUMP phosphatase manganese-dependent 5'-nucleotidase%3B specific for 5'-UMP%2C 5'-dUMP%2C and 5'-dTMP%3B member of haloacid dehalogenase (HAD)-like hydrolase superfamily gene gene2025 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10125 XM56_10130 XM56_10130 XM56_10130 2233591 2233896 - acetolactate synthase 1 regulatory subunit with IlvB catalyzes the formation of 2-acetolactate from pyruvate%2C the small subunit is required for full activity and valine sensitivity%3B E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates%2C valine sensitivity and affinity for cofactors%3B also known as acetolactate synthase small subunit gene gene2026 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10130 XM56_10135 XM56_10135 XM56_10135 2233898 2235565 - acetolactate synthase catalytic subunit gene gene2027 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10135 XM56_10140 XM56_10140 XM56_10140 2236155 2236949 + membrane protein gene gene2028 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10140 XM56_10145 XM56_10145 XM56_10145 2237028 2237804 + N-acetylmuramoyl-L-alanine amidase gene gene2029 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10145 XM56_10150 XM56_10150 XM56_10150 2237901 2240327 - virulence factor gene gene2030 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10150 XM56_10155 XM56_10155 XM56_10155 2240324 2243374 - virulence factor SrfB gene gene2031 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10155 XM56_10160 XM56_10160 XM56_10160 2243379 2244698 - virulence factor gene gene2032 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10160 XM56_10165 XM56_10165 XM56_10165 2245006 2245194 - hypothetical protein gene gene2033 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10165 XM56_10170 XM56_10170 XM56_10170 2245446 2246495 - transposase gene gene2034 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10170 XM56_10175 XM56_10175 XM56_10175 2246746 2248104 - membrane protein gene gene2035 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10175 XM56_10180 XM56_10180 XM56_10180 2248283 2249095 - inositol monophosphatase gene gene2036 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10180 XM56_10185 XM56_10185 XM56_10185 2249235 2250230 - LacI family transcriptional regulator gene gene2037 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10185 XM56_10190 XM56_10190 XM56_10190 2250379 2251839 + AMP nucleosidase Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile gene gene2038 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10190 XM56_10195 XM56_10195 XM56_10195 2251955 2252191 - transposase gene gene2039 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10195 XM56_10200 XM56_10200 XM56_10200 2252221 2252844 - resolvase gene gene2040 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10200 XM56_10205 XM56_10205 addiction module protein addiction module protein 2252850 2253449 - disrupted pseudogene gene2041 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10205 XM56_10210 XM56_10210 XM56_10210 2253574 2254119 + hypothetical protein gene gene2042 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10210 XM56_10215 XM56_10215 XM56_10215 2254199 2255053 - LysR family transcriptional regulator gene gene2043 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10215 XM56_10220 XM56_10220 XM56_10220 2255167 2256126 + acyltransferase gene gene2044 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10220 XM56_10225 XM56_10225 XM56_10225 2256515 2257273 + amidinotransferase gene gene2045 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10225 XM56_10230 XM56_10230 XM56_10230 2257300 2258073 + ABC transporter substrate-binding protein gene gene2046 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10230 XM56_10235 XM56_10235 XM56_10235 2258140 2258835 + ABC transporter gene gene2047 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10235 XM56_10240 XM56_10240 XM56_10240 2258832 2259554 + polar amino acid ABC transporter permease gene gene2048 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10240 XM56_10245 XM56_10245 XM56_10245 2259613 2260068 - AsnC family transcriptional regulator gene gene2049 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10245 XM56_10250 XM56_10250 XM56_10250 2260083 2261192 + succinylglutamate desuccinylase gene gene2050 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10250 XM56_10255 XM56_10255 XM56_10255 2261357 2261878 + transcriptional regulator gene gene2051 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10255 XM56_10260 XM56_10260 XM56_10260 2261889 2262179 - hypothetical protein gene gene2052 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10260 XM56_10265 XM56_10265 XM56_10265 2262124 2263239 + membrane protein gene gene2053 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10265 XM56_10270 XM56_10270 XM56_10270 2263223 2264383 + multidrug ABC transporter permease gene gene2054 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10270 XM56_10275 XM56_10275 XM56_10275 2264433 2265284 - S-transferase YghU%3B B2989%3B one of eight putative glutathione transferase proteins from E. coli gene gene2055 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10275 XM56_10280 XM56_10280 XM56_10280 2265446 2266792 + glycerophosphodiester phosphodiesterase gene gene2056 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10280 XM56_10285 XM56_10285 XM56_10285 2266847 2268022 - DNA repair protein gene gene2057 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10285 XM56_10290 XM56_10290 XM56_10290 2268517 2269770 + membrane protein gene gene2058 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10290 XM56_10295 XM56_10295 XM56_10295 2269885 2270601 - LuxR family transcriptional regulator gene gene2059 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10295 XM56_10300 XM56_10300 XM56_10300 2271360 2271593 - hypothetical protein gene gene2060 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10300 XM56_10305 XM56_10305 XM56_10305 2271711 2272019 - hypothetical protein gene gene2061 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10305 XM56_10310 XM56_10310 XM56_10310 2272089 2273357 - general secretion pathway protein GspD gene gene2062 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10310 XM56_10315 XM56_10315 XM56_10315 2273365 2274459 - hypothetical protein gene gene2063 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10315 XM56_10320 XM56_10320 XM56_10320 2274460 2274801 - Head virion protein G6P gene gene2064 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10320 XM56_10325 XM56_10325 XM56_10325 2274801 2276018 - attachment protein gene gene2065 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10325 XM56_10330 XM56_10330 XM56_10330 2276065 2276307 - capsid protein gene gene2066 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10330 XM56_10335 XM56_10335 XM56_10335 2276422 2276508 - minor coat protein phage-associated protein gene gene2067 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10335 XM56_10340 XM56_10340 XM56_10340 2276511 2276828 - DNA-binding protein gene gene2068 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10340 XM56_10345 XM56_10345 XM56_10345 2276840 2277892 - Replication-associated protein G2P gene gene2069 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10345 XM56_10350 XM56_10350 XM56_10350 2278062 2278244 + hypothetical protein gene gene2070 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10350 XM56_10355 XM56_10355 XM56_10355 2278333 2278755 + membrane protein gene gene2071 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10355 XM56_10360 XM56_10360 XM56_10360 2278784 2279059 + hypothetical protein gene gene2072 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10360 XM56_10365 XM56_10365 XM56_10365 2279059 2279538 + hypothetical protein gene gene2073 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10365 XM56_10370 XM56_10370 XM56_10370 2279841 2280119 + hypothetical protein gene gene2074 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10370 XM56_10375 XM56_10375 XM56_10375 2280349 2280597 + transporter gene gene2075 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10375 XM56_10380 XM56_10380 XM56_10380 2280860 2281609 + malonic semialdehyde reductase NADP(+)-dependent%3B catalyzes the formation of 3-hydroxypropionate from the toxic malonic semialdehyde%2C catalyzes the formation of 2-aminomalonate-semialdehyde from L-serine%3B can also use 3-hydroxybutyrate%2C 3-hydroxy-isobutyrate%2C D-threonine%2C L-allo-threonine%2CD-serine gene gene2076 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10380 XM56_10385 XM56_10385 XM56_10385 2281640 2281966 - membrane protein gene gene2077 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10385 XM56_10390 XM56_10390 XM56_10390 2281960 2282178 - hypothetical protein gene gene2078 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10390 XM56_10395 XM56_10395 XM56_10395 2282367 2282738 + hypothetical protein gene gene2079 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10395 XM56_10400 XM56_10400 XM56_10400 2282830 2283075 + membrane protein gene gene2080 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10400 XM56_10405 XM56_10405 XM56_10405 2283151 2283432 - hypothetical protein gene gene2081 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10405 XM56_10410 XM56_10410 XM56_10410 2283730 2285010 + voltage-gated chloride channel protein ClcB gene gene2082 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10410 XM56_10415 XM56_10415 XM56_10415 2285031 2285699 - dethiobiotin synthetase DTB synthetase%3B dethiobiotin synthase%3B involved in production of dethiobiotin from ATP and 7%2C8-diaminononanoate and carbon dioxide%3B contains magnesium gene gene2083 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10415 XM56_10420 XM56_10420 XM56_10420 2285922 2287139 - transcriptional regulator mlc%2C controls the expression of genes involved in the phosphotransferase and phosphoenolpyruvate systems%2C regulates genes involved in the uptake of sugars gene gene2084 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10420 XM56_10425 XM56_10425 XM56_10425 2287360 2288271 - LysR family transcriptional regulator gene gene2085 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10425 XM56_10430 XM56_10430 XM56_10430 2288447 2289739 + membrane protein gene gene2086 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10430 XM56_10435 XM56_10435 XM56_10435 2289927 2290316 + membrane protein gene gene2087 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10435 XM56_10440 XM56_10440 XM56_10440 2290541 2290804 + hypothetical protein gene gene2088 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10440 XM56_10445 XM56_10445 XM56_10445 2291109 2292176 + alkane 1-monooxygenase gene gene2089 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10445 XM56_10450 XM56_10450 XM56_10450 2292203 2293177 + alkane 1-monooxygenase gene gene2090 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10450 XM56_10455 XM56_10455 beta-lactamase beta-lactamase 2293302 2294033 + disrupted pseudogene gene2091 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10455 XM56_10460 XM56_10460 XM56_10460 2294196 2295125 + DNA replication terminus site-binding protein binds to DNA replication terminator sequences to prevent passage of replication forks gene gene2092 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10460 XM56_10465 XM56_10465 XM56_10465 2295211 2295930 - LuxR family transcriptional regulator gene gene2093 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10465 XM56_10470 XM56_10470 fumC fumC 2296427 2297821 - fumarate hydratase class II family (does not require metal)%3B tetrameric enzyme%3B fumarase C%3B reversibly converts (S)-malate to fumarate and water%3B functions in the TCA cycle gene gene2094 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10470 XM56_10475 XM56_10475 XM56_10475 2298047 2299222 + mannose-6-phosphate isomerase catalyzes the formation of of fructose 6-phosphate from mannose 6-phosphate gene gene2095 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10475 XM56_10480 XM56_10480 XM56_10480 2299454 2300998 + GTP-binding protein YdgA gene gene2096 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10480 XM56_10485 XM56_10485 XM56_10485 2301069 2301734 + chloramphenicol acetyltransferase gene gene2097 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10485 XM56_10490 XM56_10490 XM56_10490 2301735 2302766 - transcriptional regulator regulates malXY which are involved in maltose-glucose transport gene gene2098 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10490 XM56_10495 XM56_10495 XM56_10495 2303106 2304716 + bifunctional PTS system maltose and glucose-specific transporter subunits IICB phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS)%3B catalyzes the phosphorylation of maltose and glucose concomitant with their translocation across the cell membrane%3B component IIB catalyzes the phosphorylation of the sugar molecule%3B IIC forms the translocation channel and contains the substrate specific binding site gene gene2099 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10495 XM56_10500 XM56_10500 XM56_10500 2304928 2306106 + bifunctional beta-cystathionase/maltose regulon regulatory protein catalyzes the formation of homocysteine and pyruvate from cystathionine%3B also acts a a negative regulator for the mal regulon but interacting with the transcriptional activator MalT gene gene2100 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10500 XM56_10505 XM56_10505 XM56_10505 2306286 2307284 + adenosine deaminase gene gene2101 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10505 XM56_10510 XM56_10510 XM56_10510 2307434 2308447 - hypothetical protein gene gene2102 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10510 XM56_10515 XM56_10515 XM56_10515 2308497 2309546 - oxidoreductase gene gene2103 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10515 XM56_10520 XM56_10520 XM56_10520 2309648 2310580 - transcriptional regulator positive and negative regulator%3B regulates the araBAD and araFGH operons and other genes involved in the transport and catabolism of L-arabinose gene gene2104 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10520 XM56_10525 XM56_10525 araH araH 2310704 2311735 - L-arabinose transporter permease Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose gene gene2105 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10525 XM56_10530 XM56_10530 araG araG 2311780 2313351 - L-arabinose transporter ATP-binding protein Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose gene gene2106 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10530 XM56_10535 XM56_10535 XM56_10535 2313430 2314413 - sugar ABC transporter substrate-binding protein with AraGH is involved in the transport of arabinose into the cell gene gene2107 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10535 XM56_10540 XM56_10540 XM56_10540 2314992 2316707 + ribulokinase catalyzes the phosphorylation of ribulose to ribulose 5-phosphate gene gene2108 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10540 XM56_10545 XM56_10545 XM56_10545 2316765 2318267 + arabinose isomerase gene gene2109 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10545 XM56_10550 XM56_10550 XM56_10550 2318551 2319729 - ATP-binding protein gene gene2110 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10550 XM56_10555 XM56_10555 XM56_10555 2319877 2321997 - peptidase C39 gene gene2111 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10555 XM56_10560 XM56_10560 XM56_10560 2322000 2323394 - hemolysin D gene gene2112 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10560 XM56_10565 XM56_10565 peptidase C39 peptidase C39 2323391 2325519 - disrupted pseudogene gene2113 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10565 XM56_10570 XM56_10570 XM56_10570 2325899 2327656 + formate--tetrahydrofolate ligase catalyzes the formation of 10-formyltetrahydrofolate from formate and tetrahydrofolate gene gene2114 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10570 XM56_10575 XM56_10575 XM56_10575 2327724 2328167 + membrane protein gene gene2115 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10575 XM56_10580 XM56_10580 XM56_10580 2328499 2329080 + electron transporter RsxA gene gene2116 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10580 XM56_10585 XM56_10585 XM56_10585 2329080 2329703 + electron transporter RnfB part of membrane-bound complex thought to be involved in electron transport to nitrogen gene gene2117 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10585 XM56_10590 XM56_10590 XM56_10590 2329696 2331552 + electron transporter RnfC gene gene2118 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10590 XM56_10595 XM56_10595 XM56_10595 2331724 2332215 - hypothetical protein gene gene2119 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10595 XM56_10600 XM56_10600 XM56_10600 2332359 2333270 - AraC family transcriptional regulator gene gene2120 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10600 XM56_10605 XM56_10605 XM56_10605 2333765 2334859 + electron transporter RnfD gene gene2121 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10605 XM56_10610 XM56_10610 XM56_10610 2334869 2335498 + electron transporter RnfG part of membrane-bound complex hought to be involved in electron transport to nitrogen gene gene2122 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10610 XM56_10615 XM56_10615 XM56_10615 2335495 2336196 + elongation factor G gene gene2123 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10615 XM56_10620 XM56_10620 XM56_10620 2336193 2336834 + endonuclease III DNA-(apurinic or apyrimidinic site) lyase%3B has apurinic or apyrimidinic endonuclease activity and DNA N-glycosylase activity%3B removed damaged DNA at cytosines%2C thymines and guanines gene gene2124 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10620 XM56_10625 XM56_10625 XM56_10625 2336921 2337958 - hypothetical protein gene gene2125 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10625 XM56_10630 XM56_10630 XaxA XaxA 2338003 2339233 - disrupted pseudogene gene2126 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10630 XM56_10635 XM56_10635 XM56_10635 2339714 2340733 - transposase gene gene2127 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10635 XM56_10640 XM56_10640 XM56_10640 2341334 2343655 + CbbBc protein gene gene2128 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10640 XM56_10645 XM56_10645 XM56_10645 2343850 2345784 + exoribonuclease II Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction gene gene2129 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10645 XM56_10650 XM56_10650 XM56_10650 2346199 2348265 + carbon starvation protein A gene gene2130 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10650 XM56_10655 XM56_10655 XM56_10655 2348300 2348590 + hypothetical protein gene gene2131 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10655 XM56_10660 XM56_10660 XM56_10660 2348826 2349491 - fructose-6-phosphate aldolase similar to transaldolase from Escherichia coli%3B many organisms have multiple copies gene gene2132 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10660 XM56_10665 XM56_10665 XM56_10665 2349687 2350433 + DeoR faimly transcriptional regulator gene gene2133 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10665 XM56_10670 XM56_10670 XM56_10670 2350453 2350701 + hypothetical protein gene gene2134 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10670 XM56_10675 XM56_10675 araD araD 2350728 2351423 - ribulose 5-phosphate epimerase catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate%3B links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source gene gene2135 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10675 XM56_10680 XM56_10680 XM56_10680 2351859 2352074 + lipoprotein gene gene2136 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10680 XM56_10685 XM56_10685 XM56_10685 2352636 2353655 - transposase gene gene2137 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10685 XM56_10690 XM56_10690 XM56_10690 2353843 2354169 - translation initiation factor Sui1 involved in start site selection during the initiation of translation gene gene2138 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10690 XM56_10695 XM56_10695 XM56_10695 2354166 2354906 - orotidine 5'-phosphate decarboxylase gene gene2139 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10695 XM56_10700 XM56_10700 XM56_10700 2355257 2355517 + membrane protein gene gene2140 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10700 XM56_10705 XM56_10705 XM56_10705 2355591 2356793 - membrane protein gene gene2141 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10705 XM56_10710 XM56_10710 XM56_10710 2356966 2357532 + DNA-binding protein gene gene2142 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10710 XM56_10715 XM56_10715 XM56_10715 2357740 2358027 + hypothetical protein gene gene2143 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10715 XM56_10720 XM56_10720 XM56_10720 2358088 2359257 - tetratricopeptide repeat protein gene gene2144 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10720 XM56_10725 XM56_10725 XM56_10725 2359264 2359575 - membrane protein gene gene2145 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10725 XM56_10730 XM56_10730 XM56_10730 2359771 2360532 - phosphatidylglycerophosphatase gene gene2146 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10730 XM56_10735 XM56_10735 ribA ribA 2361160 2361750 + GTP cyclohydrolase catalyzes the conversion of GTP to formate and 2%2C5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and diphosphate gene gene2147 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10735 XM56_10740 XM56_10740 XM56_10740 2361802 2362002 + hypothetical protein gene gene2148 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10740 XM56_10745 XM56_10745 XM56_10745 2362038 2364710 - aconitate hydratase Catalyzes the conversion of citrate to isocitrate gene gene2149 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10745 XM56_10750 XM56_10750 Viral A-type inclusion protein Viral A-type inclusion protein 2365074 2366166 - disrupted pseudogene gene2150 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10750 XM56_10755 XM56_10755 cysB cysB 2366335 2367309 - CysB family transcriptional regulator LysR-type transcriptional regulator%3B contains helix-turn-helix (HTH) motif%3B in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon%3B autoregulates expression%3B crystal structure of Klebsiella aerogenes showed tetramer formation gene gene2151 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10755 XM56_10760 XM56_10760 XM56_10760 2367868 2370483 - DNA topoisomerase I catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining%2C maintains net negative superhelicity gene gene2152 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10760 XM56_10765 XM56_10765 XM56_10765 2370924 2371175 + hypothetical protein gene gene2153 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10765 XM56_10770 XM56_10770 XM56_10770 2371280 2372326 - peptidase multicopy suppressor of htrA(degP) gene gene2154 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10770 XM56_10775 XM56_10775 XM56_10775 2372499 2373260 + 3-oxoacyl-ACP reductase gene gene2155 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10775 XM56_10780 XM56_10780 XM56_10780 2373272 2373862 + cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase catalyzes the formation of adenosylcobalamide from cobinamide and the formation of coenzyme B12 from cob(I)alamin gene gene2156 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10780 XM56_10785 XM56_10785 XM56_10785 2373987 2374181 - hypothetical protein gene gene2157 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10785 XM56_10790 XM56_10790 XM56_10790 2374458 2375507 - ribosomal large subunit pseudouridine synthase B gene gene2158 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10790 XM56_10795 XM56_10795 XM56_10795 2375748 2376368 - hypothetical protein gene gene2159 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10795 XM56_10800 XM56_10800 XM56_10800 2376397 2377347 - S-adenosylmethionine tRNA ribosyltransferase gene gene2160 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10800 XM56_10805 XM56_10805 XM56_10805 2377872 2379434 + anthranilate synthase component I with component II%2C the glutamine amidotransferase%2C catalyzes the formation of anthranilate from chorismate and glutamine gene gene2161 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10805 XM56_10810 XM56_10810 XM56_10810 2379449 2380039 + anthranilate synthase subunit II gene gene2162 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10810 XM56_10815 XM56_10815 XM56_10815 2380100 2381116 + Anthranilate phosphoribosyltransferase gene gene2163 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10815 XM56_10820 XM56_10820 XM56_10820 2381120 2382496 + indole-3-glycerol phosphate synthase monomeric bifunctional protein%3B functions in tryptophan biosynthesis pathway%3B phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate gene gene2164 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10820 XM56_10825 XM56_10825 XM56_10825 2382696 2383886 + tryptophan synthase subunit beta catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate gene gene2165 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10825 XM56_10830 XM56_10830 XM56_10830 2383886 2384692 + tryptophan synthase subunit alpha gene gene2166 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10830 XM56_10835 XM56_10835 XM56_10835 2384949 2385263 + hypothetical protein gene gene2167 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10835 XM56_10840 XM56_10840 XM56_10840 2385389 2386036 - membrane protein receptor for colicin S4 gene gene2168 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10840 XM56_10845 XM56_10845 XM56_10845 2386321 2386728 + Fe-S oxidoreductase gene gene2169 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10845 XM56_10850 XM56_10850 XM56_10850 2386780 2387547 + hypothetical protein gene gene2170 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10850 XM56_10855 XM56_10855 XM56_10855 2387618 2389345 - sulfate permease gene gene2171 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10855 XM56_10860 XM56_10860 XM56_10860 2389576 2390118 + intracellular septation protein A Involved in cell division%3B probably involved in intracellular septation gene gene2172 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10860 XM56_10865 XM56_10865 XM56_10865 2390138 2390608 + acyl-CoA esterase gene gene2173 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10865 XM56_10870 XM56_10870 XM56_10870 2390704 2391459 - energy transducer TonB gene gene2174 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10870 XM56_10875 XM56_10875 XM56_10875 2391768 2392064 + hypothetical protein unknown function%3B YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase%2C but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity gene gene2175 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10875 XM56_10880 XM56_10880 XM56_10880 2392266 2392529 - hypothetical protein gene gene2176 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10880 XM56_10885 XM56_10885 XM56_10885 2392681 2393403 - diguanylate phosphodiesterase gene gene2177 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10885 XM56_10890 XM56_10890 cls cls 2394470 2395930 + cardiolipin synthetase catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol) gene gene2178 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10890 XM56_10895 XM56_10895 XM56_10895 2396065 2396388 + dsDNA-mimic protein highly acidic protein%3B the structure of the Haemophilus influenzae protein shows similarity to uracil DNA glycosylase inhibitor (Ugi)%3B binds heat-unstable protein (HU-alpha) which is a histone-like protein gene gene2179 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10895 XM56_10900 XM56_10900 XM56_10900 2396535 2397536 - peptide ABC transporter ATP-binding protein with OppABCD is involved in the transport of oligopeptides%3B OppF and OppD are ATP-binding proteins gene gene2180 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10900 XM56_10905 XM56_10905 oppD oppD 2397533 2398534 - oligopeptide transporter ATP-binding component gene gene2181 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10905 XM56_10910 XM56_10910 XM56_10910 2398546 2399454 - peptide ABC transporter permease with OppABDF is involved in the transport of oligopeptides of up to 5 amino acids into the cell gene gene2182 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10910 XM56_10915 XM56_10915 oppB oppB 2399470 2400390 - oligopeptide transporter permease gene gene2183 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10915 XM56_10920 XM56_10920 XM56_10920 2400475 2402112 - peptide ABC transporter substrate-binding protein is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate gene gene2184 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10920 XM56_10925 XM56_10925 XM56_10925 2402341 2403978 - peptide ABC transporter substrate-binding protein is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate gene gene2185 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10925 XM56_10930 XM56_10930 XM56_10930 2404717 2405361 - membrane protein gene gene2186 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10930 XM56_10935 XM56_10935 XM56_10935 2406062 2408737 + acetaldehyde dehydrogenase gene gene2187 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10935 XM56_10940 XM56_10940 XM56_10940 2409237 2409836 - thymidine kinase catalyzes the formation of thymidine 5'-phosphate from thymidine gene gene2188 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10940 XM56_10945 XM56_10945 XM56_10945 2409806 2410078 + hypothetical protein gene gene2189 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10945 XM56_10950 XM56_10950 XM56_10950 2410588 2410998 + transcriptional regulator gene gene2190 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10950 XM56_10955 XM56_10955 XM56_10955 2411383 2412732 - UDP-glucose 6-dehydrogenase gene gene2191 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10955 XM56_10960 XM56_10960 XM56_10960 2413055 2414071 - response regulator of RpoS gene gene2192 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10960 XM56_10965 XM56_10965 XM56_10965 2414173 2415075 - hypothetical protein gene gene2193 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10965 XM56_10970 XM56_10970 histone acetyltransferase histone acetyltransferase 2415329 2415822 + disrupted pseudogene gene2194 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10970 XM56_10975 XM56_10975 XM56_10975 2416449 2416913 + hypothetical protein gene gene2195 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10975 XM56_10980 XM56_10980 XM56_10980 2416995 2417843 + formyltetrahydrofolate deformylase gene gene2196 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10980 XM56_10985 XM56_10985 XM56_10985 2418016 2418100 + tRNA-Tyr tRNA gene2197 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10985 XM56_10990 XM56_10990 XM56_10990 2418407 2419267 - LysR family transcriptional regulator gene gene2198 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10990 XM56_10995 XM56_10995 XM56_10995 2420043 2420849 + exodeoxyribonuclease III gene gene2199 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_10995 XM56_11000 XM56_11000 XM56_11000 2420933 2421319 + pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase gene gene2200 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11000 XM56_11005 XM56_11005 XM56_11005 2421324 2421614 - hypothetical protein gene gene2201 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11005 XM56_11010 XM56_11010 XM56_11010 2421611 2423536 - DNA topoisomerase III decatenates replicating daughter chromosomes gene gene2202 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11010 XM56_11015 XM56_11015 XM56_11015 2423583 2424629 - selenophosphate synthetase catalyzes the formation of selenophosphate from selenide and ATP gene gene2203 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11015 XM56_11020 XM56_11020 XM56_11020 2424991 2425542 - oxidoreductase gene gene2204 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11020 XM56_11025 XM56_11025 XM56_11025 2425705 2427558 + protease 4 SppA%3B catalyzes the degradation of cleaved signal peptides%3B essential to maintain secretion of mature proteins across the membrane gene gene2205 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11025 XM56_11030 XM56_11030 ansA ansA 2427799 2428815 + cytoplasmic asparaginase I converts asparagine to aspartate and ammonia gene gene2206 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11030 XM56_11035 XM56_11035 XM56_11035 2428831 2429490 + PncA gene gene2207 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11035 XM56_11040 XM56_11040 XM56_11040 2429634 2430653 + transposase gene gene2208 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11040 XM56_11045 XM56_11045 XM56_11045 2431073 2431345 - transcriptional regulator gene gene2209 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11045 XM56_11050 XM56_11050 XM56_11050 2431419 2431832 - methionine sulfoxide reductase B gene gene2210 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11050 XM56_11055 XM56_11055 XM56_11055 2432180 2433175 + glyceraldehyde-3-phosphate dehydrogenase gene gene2211 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11055 XM56_11060 XM56_11060 XM56_11060 2433425 2434303 + glucose-6-phosphate 1-epimerase gene gene2212 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11060 XM56_11065 XM56_11065 XM56_11065 2434377 2435147 - MltA-interacting protein MipA scaffolding protein for the murein polymerase MrcB and the lytic transglycosylase MltA gene gene2213 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11065 XM56_11070 XM56_11070 XM56_11070 2435569 2437503 + serine/threonine protein kinase gene gene2214 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11070 XM56_11075 XM56_11075 XM56_11075 2437620 2438894 + hypothetical protein gene gene2215 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11075 XM56_11080 XM56_11080 XM56_11080 2438997 2440046 + membrane protein gene gene2216 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11080 XM56_11085 XM56_11085 XM56_11085 2440228 2440674 + hypothetical protein gene gene2217 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11085 XM56_11090 XM56_11090 XM56_11090 2440687 2441592 - LysR family transcriptional regulator gene gene2218 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11090 XM56_11095 XM56_11095 XM56_11095 2441761 2442633 + quercetin 2%2C3-dioxygenase gene gene2219 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11095 XM56_11100 XM56_11100 XM56_11100 2442979 2445573 + diguanylate phosphodiesterase gene gene2220 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11100 XM56_11105 XM56_11105 XM56_11105 2445927 2447117 + MFS transporter gene gene2221 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11105 XM56_11110 XM56_11110 XM56_11110 2447214 2448305 - alanine racemase converts L-alanine to D-alanine which is used in cell wall biosynthesis%3B binds one pyridoxal phosphate per monomer%3B forms a homodimer gene gene2222 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11110 XM56_11115 XM56_11115 XM56_11115 2448489 2449793 - amino acid dehydrogenase catalyzes the oxidative deamination of D-amino acids gene gene2223 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11115 XM56_11120 XM56_11120 XM56_11120 2450304 2451839 + SpoVR family protein gene gene2224 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11120 XM56_11125 XM56_11125 XM56_11125 2451925 2452644 - fatty acid metabolism regulator Multifunctional regulator of fatty acid metabolism gene gene2225 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11125 XM56_11130 XM56_11130 XM56_11130 2452966 2454540 + sodium:proton antiporter gene gene2226 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11130 XM56_11135 XM56_11135 XM56_11135 2454770 2455300 + hypothetical protein gene gene2227 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11135 XM56_11140 XM56_11140 XM56_11140 2455437 2455640 - acyl-ACP--UDP-N- acetylglucosamine O-acyltransferase gene gene2228 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11140 XM56_11145 XM56_11145 XM56_11145 2456294 2456683 + hypothetical protein gene gene2229 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11145 XM56_11150 XM56_11150 XM56_11150 2456693 2456929 + hypothetical protein gene gene2230 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11150 XM56_11155 XM56_11155 XM56_11155 2457136 2457900 - copper homeostasis protein CutC gene gene2231 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11155 XM56_11160 XM56_11160 XM56_11160 2458142 2458702 - metal-binding protein gene gene2232 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11160 XM56_11165 XM56_11165 XM56_11165 2459070 2460800 + arginyl-tRNA synthetase gene gene2233 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11165 XM56_11170 XM56_11170 XM56_11170 2460924 2462360 + transposase gene gene2234 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11170 XM56_11175 XM56_11175 XM56_11175 2462503 2463291 - hypothetical protein gene gene2235 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11175 XM56_11180 XM56_11180 XM56_11180 2463345 2463548 + hypothetical protein gene gene2236 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11180 XM56_11185 XM56_11185 XM56_11185 2463820 2464527 - acetyltransferase gene gene2237 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11185 XM56_11190 XM56_11190 hmsS hmsS 2464743 2465210 - hemin storage system protein in Yersinia this gene is involved in biofilm formation and hemin adsorption gene gene2238 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11190 XM56_11195 XM56_11195 XM56_11195 2465207 2466541 - N-glycosyltransferase predicted polysaccharide polymerase involved in biofilm formation%3B required for the synthesis of the beta-1%2C6-N-acetylglucosamine polysaccharide%3B PgaC%3B in Yersinia the HmsR protein is an inner membrane protein gene gene2239 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11195 XM56_11200 XM56_11200 pgaB pgaB 2466531 2468555 - outer membrane N-deacetylase in Yersinia this protein is involved in biofilm formation and hemin adsorption%3B related protein PgaB in Escherichia coli is an outer membrane N-deacetylase involved in poly-beta-1%2C6-N-acetyl-D-glucosamine (PGA) export gene gene2240 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11200 XM56_11205 XM56_11205 hmsH hmsH 2468567 2471036 - disrupted pseudogene gene2241 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11205 XM56_11210 XM56_11210 XM56_11210 2471715 2472932 - peptidase gene gene2242 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11210 XM56_11215 XM56_11215 XM56_11215 2472983 2473753 - iron reductase gene gene2243 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11215 XM56_11220 XM56_11220 XM56_11220 2473911 2474537 - alanyl-tRNA synthetase gene gene2244 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11220 XM56_11225 XM56_11225 XM56_11225 2474627 2475559 + transcriptional regulator gene gene2245 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11225 XM56_11230 XM56_11230 XM56_11230 2475610 2476479 - tellurite resistance protein TehB with TehA confers resistance to tellurite gene gene2246 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11230 XM56_11235 XM56_11235 XM56_11235 2476624 2476938 - cytochrome gene gene2247 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11235 XM56_11240 XM56_11240 XM56_11240 2476938 2477426 - thioredoxin gene gene2248 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11240 XM56_11245 XM56_11245 XM56_11245 2477416 2478129 - ABC transporter ATP-binding protein gene gene2249 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11245 XM56_11250 XM56_11250 XM56_11250 2478133 2479290 - ABC transporter permease gene gene2250 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11250 XM56_11255 XM56_11255 XM56_11255 2479280 2480572 - ABC transporter permease gene gene2251 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11255 XM56_11260 XM56_11260 XM56_11260 2480575 2481978 - membrane protein gene gene2252 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11260 XM56_11265 XM56_11265 XM56_11265 2482114 2482641 - iron transporter gene gene2253 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11265 XM56_11270 XM56_11270 XM56_11270 2482722 2484659 - iron permease gene gene2254 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11270 XM56_11275 XM56_11275 XM56_11275 2484833 2485351 + hypothetical protein gene gene2255 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11275 XM56_11280 XM56_11280 XM56_11280 2485468 2487108 - MFS transporter gene gene2256 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11280 XM56_11285 XM56_11285 XM56_11285 2487220 2488227 - glutaminase catalyzes the formation of glutamate from glutamine gene gene2257 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11285 XM56_11290 XM56_11290 XM56_11290 2488793 2489572 - hydroxypyruvate isomerase gene gene2258 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11290 XM56_11295 XM56_11295 XM56_11295 2489575 2490198 - aldolase gene gene2259 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11295 XM56_11300 XM56_11300 XM56_11300 2490195 2491457 - membrane protein gene gene2260 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11300 XM56_11305 XM56_11305 XM56_11305 2491980 2492759 + DeoR faimly transcriptional regulator gene gene2261 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11305 XM56_11310 XM56_11310 XM56_11310 2493004 2494680 + histidine kinase C4-dicarboxylate-sensing histidine kinase%3B part of two-component regulatory system with DcuR%3B regulates anaerobic fumarate respiration gene gene2262 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11310 XM56_11315 XM56_11315 XM56_11315 2494673 2495392 + transcriptional regulator response regulator in two-component regulatory system with DcuS%3B phosphorylated DcuR activates transcription of genes involved in anaerobic fumarate respiration gene gene2263 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11315 XM56_11320 XM56_11320 XM56_11320 2495689 2497047 - malate permease gene gene2264 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11320 XM56_11325 XM56_11325 XM56_11325 2498104 2499618 + L-asparagine permease involved in the transporte of L-asparagine gene gene2265 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11325 XM56_11330 XM56_11330 XM56_11330 2499767 2500120 - MarR family transcriptional regulator gene gene2266 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11330 XM56_11335 XM56_11335 XM56_11335 2500406 2501431 + ROK family transcriptional regulator gene gene2267 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11335 XM56_11340 XM56_11340 XM56_11340 2501668 2502840 + major facilitator transporter gene gene2268 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11340 XM56_11345 XM56_11345 XM56_11345 2503021 2503839 + sugar phosphatase gene gene2269 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11345 XM56_11350 XM56_11350 XM56_11350 2504380 2504637 - hypothetical protein gene gene2270 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11350 XM56_11355 XM56_11355 XM56_11355 2504896 2506098 - transposase gene gene2271 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11355 XM56_11360 XM56_11360 XM56_11360 2506950 2507606 - SAM-dependent methyltransferase gene gene2272 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11360 XM56_11365 XM56_11365 XM56_11365 2508143 2508328 - hypothetical protein gene gene2273 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11365 XM56_11370 XM56_11370 XM56_11370 2508448 2509650 - transposase gene gene2274 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11370 XM56_11375 XM56_11375 XM56_11375 2509853 2510554 - LuxR family transcriptional regulator gene gene2275 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11375 XM56_11380 XM56_11380 XM56_11380 2510608 2511921 - allantoin permease gene gene2276 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11380 XM56_11385 XM56_11385 XM56_11385 2512125 2512889 + LuxR family transcriptional regulator gene gene2277 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11385 XM56_11390 XM56_11390 XM56_11390 2513248 2513730 - integrase gene gene2278 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11390 XM56_11395 XM56_11395 XM56_11395 2513804 2515021 + tail protein gene gene2279 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11395 XM56_11400 XM56_11400 XM56_11400 2515024 2515476 + tail assembly protein gene gene2280 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11400 XM56_11405 XM56_11405 XM56_11405 2515473 2516615 + D protein gene gene2281 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11405 XM56_11410 XM56_11410 XM56_11410 2517014 2517829 - histidine kinase gene gene2282 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11410 XM56_11415 XM56_11415 XM56_11415 2518142 2519140 + recombinase gene gene2283 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11415 XM56_11420 XM56_11420 XM56_11420 2519467 2519808 - hypothetical protein gene gene2284 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11420 XM56_11425 XM56_11425 XM56_11425 2519905 2520789 - copper resistance protein CopD gene gene2285 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11425 XM56_11430 XM56_11430 XM56_11430 2520791 2521177 - hypothetical protein gene gene2286 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11430 XM56_11435 XM56_11435 XM56_11435 2521570 2522079 - ferritin cytoplasmic iron storage protein gene gene2287 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11435 XM56_11440 XM56_11440 XM56_11440 2522463 2522696 + DNA polymerase III subunit theta gene gene2288 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11440 XM56_11445 XM56_11445 XM56_11445 2522746 2523702 - proline iminopeptidase gene gene2289 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11445 XM56_11450 XM56_11450 XM56_11450 2524212 2524874 + exodeoxyribonuclease X 3'-5' exonuclease activity on single or double-strand DNA gene gene2290 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11450 XM56_11455 XM56_11455 XM56_11455 2524886 2526940 - protease 2 PtrB%3B oligopeptidase that cleaves peptide bonds following arginine and lysine residues gene gene2291 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11455 XM56_11460 XM56_11460 XM56_11460 2527130 2527486 - hypothetical protein gene gene2292 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11460 XM56_11465 XM56_11465 XM56_11465 2527592 2527900 - hypothetical protein gene gene2293 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11465 XM56_11470 XM56_11470 XM56_11470 2527940 2528260 - hypothetical protein gene gene2294 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11470 XM56_11475 XM56_11475 XM56_11475 2528356 2529738 - ATP-dependent RNA helicase DbpA exhibits an RNA-dependent ATPase activity%2C specifically stimulated by bacterial 23S rRNA gene gene2295 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11475 XM56_11480 XM56_11480 XM56_11480 2529992 2531173 + phosphoribosylglycinamide formyltransferase gene gene2296 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11480 XM56_11485 XM56_11485 XM56_11485 2531241 2531498 - hypothetical protein gene gene2297 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11485 XM56_11490 XM56_11490 pabB pabB 2531681 2533051 + aminodeoxychorismate synthase para-aminobenzoate synthase component 1%3B catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and L-glutamine gene gene2298 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11490 XM56_11495 XM56_11495 XM56_11495 2533052 2533651 + NUDIX hydrolase gene gene2299 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11495 XM56_11500 XM56_11500 XM56_11500 2534104 2535468 + serine dehydratase catalyzes the formation of pyruvate from serine gene gene2300 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11500 XM56_11505 XM56_11505 XM56_11505 2535919 2536938 - transposase gene gene2301 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11505 XM56_11510 XM56_11510 XM56_11510 2537948 2539492 - membrane protein gene gene2302 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11510 XM56_11515 XM56_11515 XM56_11515 2540262 2541227 + PTS mannose transporter subunit IIAB catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B subunit IIA transfers a phosphoryl group to subunit IIB%3B subunit IIB transfers the phosphoryl group to the substrate gene gene2303 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11515 XM56_11520 XM56_11520 XM56_11520 2541445 2542242 + PTS mannose transporter subunit IIC catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B the IIC domain forms the PTS system translocation channel and contains the specific substrate-binding site gene gene2304 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11520 XM56_11525 XM56_11525 XM56_11525 2542258 2543121 + PTS mannose transporter subunit IID hosphoenolpyruvate-dependent sugar phosphotransferase system catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IID with IIC forms the translocation channel gene gene2305 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11525 XM56_11530 XM56_11530 XM56_11530 2543185 2543646 + hypothetical protein gene gene2306 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11530 XM56_11535 XM56_11535 XM56_11535 2544087 2544656 + hypothetical protein membrane protein YebN gene gene2307 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11535 XM56_11540 XM56_11540 XM56_11540 2544985 2547264 - TonB-dependent receptor gene gene2308 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11540 XM56_11545 XM56_11545 XM56_11545 2547849 2549930 + diguanylate cyclase gene gene2309 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11545 XM56_11550 XM56_11550 XM56_11550 2550098 2550376 + hypothetical protein gene gene2310 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11550 XM56_11555 XM56_11555 XM56_11555 2550538 2551398 - 23S rRNA methyltransferase gene gene2311 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11555 XM56_11560 XM56_11560 XM56_11560 2551516 2553225 - cell division protein FtsI penicillin-binding protein 3%3B transpeptidase involved in septal peptidoglycan synthesis gene gene2312 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11560 XM56_11565 XM56_11565 XM56_11565 2553427 2554146 + polyphenol oxidoreductase gene gene2313 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11565 XM56_11570 XM56_11570 XM56_11570 2554224 2554433 - cold-shock protein gene gene2314 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11570 XM56_11575 XM56_11575 XM56_11575 2554476 2554592 - hypothetical protein gene gene2315 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11575 XM56_11580 XM56_11580 XM56_11580 2555590 2556204 + phospholipid:lipid A palmitoyltransferase gene gene2316 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11580 XM56_11585 XM56_11585 XM56_11585 2556445 2557836 - aromatic amino acid transporter gene gene2317 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11585 XM56_11590 XM56_11590 XM56_11590 2558028 2558273 - hypothetical protein gene gene2318 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11590 XM56_11595 XM56_11595 XM56_11595 2558380 2558679 - hypothetical protein gene gene2319 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11595 XM56_11600 XM56_11600 XM56_11600 2558881 2559156 - hypothetical protein gene gene2320 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11600 XM56_11605 XM56_11605 XM56_11605 2559695 2559928 + membrane protein gene gene2321 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11605 XM56_11610 XM56_11610 XM56_11610 2560021 2560260 - hypothetical protein gene gene2322 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11610 XM56_11615 XM56_11615 XM56_11615 2560576 2560689 - membrane protein gene gene2323 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11615 XM56_11620 XM56_11620 XM56_11620 2560928 2561314 + AraC family transcriptional regulator gene gene2324 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11620 XM56_11625 XM56_11625 XM56_11625 2561373 2561537 - membrane protein gene gene2325 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11625 XM56_11630 XM56_11630 XM56_11630 2561973 2563475 - amino acid APC transporter gene gene2326 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11630 XM56_11635 XM56_11635 XM56_11635 2563743 2564162 - acetyltransferase gene gene2327 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11635 XM56_11640 XM56_11640 XM56_11640 2564362 2566080 + multidrug ABC transporter ATP-binding protein gene gene2328 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11640 XM56_11645 XM56_11645 XM56_11645 2566183 2567031 + kinase gene gene2329 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11645 XM56_11650 XM56_11650 XM56_11650 2567157 2568110 - toxin gene gene2330 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11650 XM56_11655 XM56_11655 XM56_11655 2568107 2568652 - hypothetical protein gene gene2331 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11655 XM56_11660 XM56_11660 XM56_11660 2568796 2570199 - hypothetical protein gene gene2332 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11660 XM56_11665 XM56_11665 XM56_11665 2570456 2570713 + hypothetical protein gene gene2333 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11665 XM56_11670 XM56_11670 XM56_11670 2570984 2571295 + acid-resistance protein gene gene2334 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11670 XM56_11675 XM56_11675 XM56_11675 2571374 2571763 + hypothetical protein gene gene2335 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11675 XM56_11680 XM56_11680 XM56_11680 2571787 2572662 - AraC family transcriptional regulator gene gene2336 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11680 XM56_11685 XM56_11685 XM56_11685 2572845 2573759 + multidrug DMT transporter permease gene gene2337 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11685 XM56_11690 XM56_11690 XM56_11690 2573829 2574101 - hypothetical protein gene gene2338 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11690 XM56_11695 XM56_11695 XM56_11695 2575061 2575345 + hypothetical protein gene gene2339 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11695 XM56_11700 XM56_11700 XM56_11700 2575409 2575813 - transcriptional regulator gene gene2340 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11700 XM56_11705 XM56_11705 XM56_11705 2576083 2576940 + quinone oxidoreductase gene gene2341 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11705 XM56_11710 XM56_11710 O-acetylhomoserine aminocarboxypropyltransferase O-acetylhomoserine aminocarboxypropyltransferase 2577003 2578279 - disrupted pseudogene gene2342 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11710 XM56_11715 XM56_11715 XM56_11715 2578789 2579127 + hypothetical protein gene gene2343 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11715 XM56_11720 XM56_11720 XM56_11720 2579420 2579776 + UV protection and mutation protein gene gene2344 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11720 XM56_11725 XM56_11725 XM56_11725 2579776 2581044 + DNA polymerase V subunit UmuC binds processed UmuD protein to form functional DNA pol V (UmuD'2UmuC)%3B involved in translesion polymerization gene gene2345 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11725 XM56_11730 XM56_11730 XM56_11730 2581617 2583176 + chemotaxis protein gene gene2346 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11730 XM56_11735 XM56_11735 XM56_11735 2583350 2583610 + hypothetical protein gene gene2347 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11735 XM56_11740 XM56_11740 XM56_11740 2583741 2584736 + sucrose operon repressor gene gene2348 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11740 XM56_11745 XM56_11745 XM56_11745 2584739 2586208 - glycosyl hydrolase family 32 gene gene2349 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11745 XM56_11750 XM56_11750 XM56_11750 2586214 2587455 - galactoside permease gene gene2350 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11750 XM56_11755 XM56_11755 XM56_11755 2587962 2589200 - O-antigen biosynthesis protein gene gene2351 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11755 XM56_11760 XM56_11760 XM56_11760 2589334 2590194 - glycosyltransferase group 2 gene gene2352 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11760 XM56_11765 XM56_11765 XM56_11765 2590725 2590964 - hypothetical protein gene gene2353 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11765 XM56_11770 XM56_11770 XM56_11770 2591411 2592370 + membrane protein gene gene2354 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11770 XM56_11775 XM56_11775 XM56_11775 2592690 2592773 - transposase gene gene2355 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11775 XM56_11780 XM56_11780 XM56_11780 2592797 2593195 - transposase gene gene2356 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11780 XM56_11785 XM56_11785 XM56_11785 2593329 2594027 - hypothetical protein gene gene2357 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11785 XM56_11790 XM56_11790 transposase transposase 2594143 2595413 + disrupted pseudogene gene2358 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11790 XM56_11795 XM56_11795 XM56_11795 2595652 2596905 - isocitrate dehydrogenase Converts isocitrate to alpha ketoglutarate gene gene2359 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11795 XM56_11800 XM56_11800 XM56_11800 2597036 2597662 + 23S rRNA pseudouridylate synthase catalyzes the formation of pseudouridine from uracil-2457 in 23S ribosomal RNA gene gene2360 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11800 XM56_11805 XM56_11805 XM56_11805 2597655 2598101 + phosphatase gene gene2361 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11805 XM56_11810 XM56_11810 mnmA mnmA 2598287 2599408 + tRNA 2-thiouridylase catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs gene gene2362 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11810 XM56_11815 XM56_11815 XM56_11815 2599539 2600165 + lysogenization regulator HflD%3B UPF0274%3B in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein%3B in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis gene gene2363 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11815 XM56_11820 XM56_11820 XM56_11820 2600191 2601561 + adenylosuccinate lyase Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide gene gene2364 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11820 XM56_11825 XM56_11825 XM56_11825 2601716 2602339 + hypothetical protein gene gene2365 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11825 XM56_11830 XM56_11830 XM56_11830 2602411 2603082 + transcriptional regulator response regulator in two-component regulatory system with PhoQ%3B involved in magnesium starvation and stress gene gene2366 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11830 XM56_11835 XM56_11835 XM56_11835 2603088 2604545 + sensor protein PhoQ gene gene2367 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11835 XM56_11840 XM56_11840 XM56_11840 2604627 2605748 + 50S ribosomal protein L16 arginine hydroxylase gene gene2368 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11840 XM56_11845 XM56_11845 XM56_11845 2605965 2607200 - peptidase T gene gene2369 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11845 XM56_11850 XM56_11850 XM56_11850 2607370 2608206 - NAD-dependent deacetylase Modulates the activities of several enzymes which are inactive in their acetylated form gene gene2370 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11850 XM56_11855 XM56_11855 XM56_11855 2608267 2609181 - N-acetylglucosamine kinase catalyzes the formation of N-acetyl-D-glucosamine-6-phosphate from N-acetyl-D-glucosamine gene gene2371 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11855 XM56_11860 XM56_11860 XM56_11860 2609489 2610736 - outer membrane-specific lipoprotein transporter subunit LolE part of the ATP-dependent transport system LolCDE%3B responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane gene gene2372 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11860 XM56_11865 XM56_11865 lolD lolD 2610748 2611452 - lipoprotein ABC transporter ATP-binding protein outer membrane specific%3B part of transporter complex lolCDE involved in the translocation of mature outer membrane-directed lipoproteins%2C from the inner membrane to the periplasmic chaperone gene gene2373 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11865 XM56_11870 XM56_11870 XM56_11870 2611445 2612647 - outer membrane-specific lipoprotein transporter subunit LolC part of the ATP-dependent transport system LolCDE%3B responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane gene gene2374 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11870 XM56_11875 XM56_11875 XM56_11875 2612909 2616355 + transcription-repair coupling factor gene gene2375 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11875 XM56_11880 XM56_11880 XM56_11880 2616494 2617033 - hypothetical protein gene gene2376 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11880 XM56_11885 XM56_11885 XM56_11885 2617414 2618718 - NADH dehydrogenase gene gene2377 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11885 XM56_11890 XM56_11890 XM56_11890 2619097 2619639 - hypothetical protein gene gene2378 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11890 XM56_11895 XM56_11895 XM56_11895 2619642 2620667 - beta-hexosaminidase hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides gene gene2379 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11895 XM56_11900 XM56_11900 XM56_11900 2620690 2621550 - thiamine kinase gene gene2380 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11900 XM56_11905 XM56_11905 XM56_11905 2621591 2622172 - penicillin-binding protein gene gene2381 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11905 XM56_11910 XM56_11910 XM56_11910 2622243 2622632 - membrane protein gene gene2382 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11910 XM56_11915 XM56_11915 XM56_11915 2622669 2623022 - purine nucleoside phosphoramidase gene gene2383 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11915 XM56_11920 XM56_11920 XM56_11920 2623098 2623919 - shikimate dehydrogenase gene gene2384 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11920 XM56_11925 XM56_11925 XM56_11925 2624067 2625857 + peptide ABC transporter substrate-binding protein gene gene2385 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11925 XM56_11930 XM56_11930 XM56_11930 2626500 2627684 + radical SAM protein gene gene2386 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11930 XM56_11935 XM56_11935 XM56_11935 2627718 2629001 + ATP-binding protein gene gene2387 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11935 XM56_11940 XM56_11940 XM56_11940 2628998 2631133 + ABC transporter ATP-binding protein gene gene2388 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11940 XM56_11945 XM56_11945 XM56_11945 2631114 2632031 + hypothetical protein gene gene2389 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11945 XM56_11950 XM56_11950 XM56_11950 2632131 2633564 - PTS glucose-specific subunit IIBC phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel gene gene2390 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11950 XM56_11955 XM56_11955 XM56_11955 2633872 2634681 - DNAse gene gene2391 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11955 XM56_11960 XM56_11960 XM56_11960 2634696 2635703 - DNA polymerase III subunit delta' catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand%3B the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA gene gene2392 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11960 XM56_11965 XM56_11965 XM56_11965 2635703 2636341 - thymidylate kinase gene gene2393 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11965 XM56_11970 XM56_11970 XM56_11970 2636331 2637356 - aminodeoxychorismate lyase gene gene2394 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11970 XM56_11975 XM56_11975 XM56_11975 2637418 2638242 - 4-amino-4-deoxychorismate lyase catalyzes the formation of 4-aminobenzoate and pyruvate from 4-amino-4-deoxychorismate gene gene2395 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11975 XM56_11980 XM56_11980 XM56_11980 2638480 2639718 - 3-oxoacyl-ACP synthase FabF%3B beta-ketoacyl-ACP synthase II%2C KASII%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP gene gene2396 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11980 XM56_11985 XM56_11985 XM56_11985 2639813 2640049 - acyl carrier protein carries the fatty acid chain in fatty acid biosynthesis gene gene2397 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11985 XM56_11990 XM56_11990 fabG fabG 2640203 2640937 - 3-ketoacyl-ACP reductase catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis gene gene2398 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11990 XM56_11995 XM56_11995 XM56_11995 2640951 2641880 - malonyl CoA-ACP transacylase gene gene2399 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_11995 XM56_12000 XM56_12000 XM56_12000 2641935 2642888 - 3-oxoacyl-ACP synthase FabH%3B beta-ketoacyl-acyl carrier protein synthase III%3B catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation%3B differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs gene gene2400 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12000 XM56_12005 XM56_12005 XM56_12005 2642895 2643899 - phosphate acyltransferase gene gene2401 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12005 XM56_12010 XM56_12010 rpmF rpmF 2643966 2644133 - 50S ribosomal protein L32 some L32 proteins have zinc finger motifs consisting of CXXC while others do not gene gene2402 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12010 XM56_12015 XM56_12015 XM56_12015 2644139 2644669 - hypothetical protein gene gene2403 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12015 XM56_12020 XM56_12020 XM56_12020 2644811 2645392 + septum formation inhibitor Maf Maf%3B overexpression in Bacillus subtilis inhibits septation in the dividing cell gene gene2404 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12020 XM56_12025 XM56_12025 XM56_12025 2645433 2646392 - 23S rRNA pseudouridylate synthase catalyzes the transformation of uracil to pseudouracil at nucleotides U955%2C U2504%2C and U2580 in 23S rRNA gene gene2405 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12025 XM56_12030 XM56_12030 XM56_12030 2646969 2650451 + ribonuclease E gene gene2406 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12030 XM56_12035 XM56_12035 XM56_12035 2650521 2650808 - antibiotic biosynthesis monooxygenase gene gene2407 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12035 XM56_12040 XM56_12040 XM56_12040 2651035 2652081 + dihydroorotase gene gene2408 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12040 XM56_12045 XM56_12045 XM56_12045 2652198 2652443 + damage-inducible protein I gene gene2409 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12045 XM56_12050 XM56_12050 bssS bssS 2652806 2653060 + biofilm formation regulatory protein BssS BssS%3B regulator of biofilm through signal secretion%3B disruption of this gene in Escherichia coli led to effects on biofilm formation%2C alteration in expression of a number of genes and mutations in bssS led to defects in indole transport and autoinducer-2 uptake and processing gene gene2410 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12050 XM56_12055 XM56_12055 solA solA 2653324 2654445 + N-methyltryptophan oxidase catalyzes the demethylation of N-methyl-L-tryptophan forming L-tryptophan and formaldehyde%3B FAD-binding%3B can also catalyze the demethylation of other N-methyl amino acids gene gene2411 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12055 XM56_12060 XM56_12060 XM56_12060 2654704 2655288 + LuxR family transcriptional regulator gene gene2412 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12060 XM56_12065 XM56_12065 tqsA tqsA 2655799 2656860 - pheromone autoinducer 2 transporter transport of quorum-sensing signal%3B mutations in this gene alters the transport of the quorum-sensing signal autoinducer 2 (AI-2) which affects expression of a large number of genes gene gene2413 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12065 XM56_12070 XM56_12070 XM56_12070 2656960 2658012 - sulfurtransferase gene gene2414 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12070 XM56_12075 XM56_12075 XM56_12075 2658190 2658348 - membrane protein gene gene2415 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12075 XM56_12080 XM56_12080 XM56_12080 2658489 2661572 - tetrathionate reductase subunit A gene gene2416 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12080 XM56_12085 XM56_12085 XM56_12085 2661565 2662518 - tetrathionate reductase subunit C gene gene2417 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12085 XM56_12090 XM56_12090 XM56_12090 2662648 2663382 - tetrathionate reductase subunit B gene gene2418 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12090 XM56_12095 XM56_12095 XM56_12095 2663521 2665281 + histidine kinase gene gene2419 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12095 XM56_12100 XM56_12100 XM56_12100 2665259 2665843 + tetrathionate reductase gene gene2420 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12100 XM56_12105 XM56_12105 XM56_12105 2666099 2667019 + lipid A biosynthesis lauroyl acyltransferase Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA gene gene2421 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12105 XM56_12110 XM56_12110 XM56_12110 2667170 2668252 + hypothetical protein gene gene2422 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12110 XM56_12115 XM56_12115 XM56_12115 2668445 2670073 + hypothetical protein gene gene2423 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12115 XM56_12120 XM56_12120 XM56_12120 2670703 2671137 + DoxX gene gene2424 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12120 XM56_12125 XM56_12125 multidrug transporter multidrug transporter 2671421 2672664 + disrupted pseudogene gene2425 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12125 XM56_12130 XM56_12130 XM56_12130 2673172 2674707 + amino acid transporter gene gene2426 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12130 XM56_12135 XM56_12135 XM56_12135 2674932 2675951 + transposase gene gene2427 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12135 XM56_12140 XM56_12140 XM56_12140 2676353 2676787 - glyoxalase gene gene2428 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12140 XM56_12145 XM56_12145 XM56_12145 2676805 2677056 - lipoprotein gene gene2429 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12145 XM56_12150 XM56_12150 XM56_12150 2677343 2679925 - glucosyltransferase MdoH necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space gene gene2430 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12150 XM56_12155 XM56_12155 mdoG mdoG 2679918 2681471 - glucan biosynthesis protein G involved in the biosynthesis of osmoregulated periplasmic glucans%3B required for the assembly of the polyglucose structure of glucan gene gene2431 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12155 XM56_12160 XM56_12160 opgC opgC 2681804 2682943 + glucans biosynthesis protein required for the transfer of succinyl residues to osmoregulated periplasmic glucans gene gene2432 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12160 XM56_12165 XM56_12165 XM56_12165 2683154 2683399 + hypothetical protein gene gene2433 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12165 XM56_12170 XM56_12170 XM56_12170 2683930 2684949 - transposase gene gene2434 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12170 XM56_12175 XM56_12175 cvrA cvrA 2685443 2687170 + potassium/proton antiporter the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter%3B can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli gene gene2435 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12175 XM56_12180 XM56_12180 XM56_12180 2687281 2688213 - multidrug DMT transporter gene gene2436 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12180 XM56_12185 XM56_12185 XM56_12185 2688512 2689156 + acyl-homoserine-lactone synthase gene gene2437 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12185 XM56_12190 XM56_12190 XM56_12190 2689149 2689883 - LuxR family transcriptional regulator gene gene2438 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12190 XM56_12195 XM56_12195 XM56_12195 2690622 2691290 - cytochrome C heme lyase gene gene2439 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12195 XM56_12200 XM56_12200 XM56_12200 2691290 2691700 - nitrite reductase gene gene2440 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12200 XM56_12205 XM56_12205 XM56_12205 2691697 2692245 - thiol:disulfide interchange protein DsbE gene gene2441 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12205 XM56_12210 XM56_12210 XM56_12210 2692242 2694131 - cytochrome C biogenesis protein gene gene2442 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12210 XM56_12215 XM56_12215 XM56_12215 2694145 2695110 - nitrite reductase membrane protein%2C may be involved in the transfer of electrons from quinones to c-type cytochromes gene gene2443 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12215 XM56_12220 XM56_12220 XM56_12220 2695107 2695778 - nitrite reductase 4Fe4S subunit%3B may be involved in the transfer of electrons from quinones to the c-type cytochromes gene gene2444 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12220 XM56_12225 XM56_12225 XM56_12225 2695775 2696341 - cytochrome C nitrite reductase gene gene2445 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12225 XM56_12230 XM56_12230 nrfA nrfA 2696432 2697781 - cytochrome C nitrite reductase catalyzes the formate-dependent reduction of nitrite to ammonia%3B cytochrome C552 gene gene2446 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12230 XM56_12235 XM56_12235 XM56_12235 2698334 2698421 - tRNA-Ser tRNA gene2447 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12235 XM56_12240 XM56_12240 XM56_12240 2698676 2699005 + sulfur transfer protein TusE transfers sulfur from TusBCD complex to MnmA%3B involved in thiouridation of U34 position of some tRNAs gene gene2448 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12240 XM56_12245 XM56_12245 XM56_12245 2699033 2699311 - acylphosphatase catalyzes the hydrolysis of acylphosphate gene gene2449 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12245 XM56_12250 XM56_12250 XM56_12250 2699331 2699696 - membrane protein gene gene2450 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12250 XM56_12255 XM56_12255 XM56_12255 2699709 2699918 - hypothetical protein gene gene2451 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12255 XM56_12260 XM56_12260 XM56_12260 2700174 2701358 + 23S rRNA methyltransferase SAM-dependent%3Bcatalyzes the methylation of cytosine at position 1962 of the 23S rRNA gene gene2452 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12260 XM56_12265 XM56_12265 XM56_12265 2701421 2701738 + heat shock protein HspQ gene gene2453 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12265 XM56_12270 XM56_12270 XM56_12270 2701821 2702237 - hypothetical protein gene gene2454 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12270 XM56_12275 XM56_12275 XM56_12275 2702554 2703237 + hypothetical protein gene gene2455 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12275 XM56_12280 XM56_12280 XM56_12280 2703441 2703899 + methylglyoxal synthase gene gene2456 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12280 XM56_12285 XM56_12285 helD helD 2703962 2706016 - DNA helicase IV catalyzes the ATP-dependent unwinding of duplex DNA in the 3' to 5' direction with respect to the bound single strand gene gene2457 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12285 XM56_12290 XM56_12290 XM56_12290 2706211 2706663 + membrane protein gene gene2458 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12290 XM56_12295 XM56_12295 XM56_12295 2706688 2708823 + membrane protein gene gene2459 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12295 XM56_12300 XM56_12300 XM56_12300 2708860 2709495 - DNA transformation protein tfoX gene gene2460 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12300 XM56_12305 XM56_12305 XM56_12305 2709725 2710231 + cell division protein gene gene2461 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12305 XM56_12310 XM56_12310 XM56_12310 2710589 2711662 + membrane protein OmpA is believed to be a porin%2C involved in diffusion of nonspecific small solutes across the outer membrane. It is the most abundant integral protein of the outer membrane of E. coli%2C and it is known to play a role as a phage receptor%2C a mediator of F-factor dependent conjugation%2C and in maintaining the structural shape of the outer membrane%3B 3a%3B II*%3B G%3B d gene gene2462 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12310 XM56_12315 XM56_12315 XM56_12315 2711793 2712248 - Ter macrodomain organizer matS-binding protein gene gene2463 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12315 XM56_12320 XM56_12320 XM56_12320 2712459 2714210 + Lon protease gene gene2464 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12320 XM56_12325 XM56_12325 XM56_12325 2714279 2714797 + 3-hydroxydecanoyl-ACP dehydratase catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2%2C3-decenoyl-ACP or 3%2C4-decenoyl-ACP gene gene2465 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12325 XM56_12330 XM56_12330 XM56_12330 2715302 2716321 - transposase gene gene2466 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12330 XM56_12335 XM56_12335 XM56_12335 2716542 2717084 + acyl dehydratase gene gene2467 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12335 XM56_12340 XM56_12340 XM56_12340 2717084 2718358 + 3-oxoacyl-ACP synthase FabF%3B beta-ketoacyl-ACP synthase II%2C KASII%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP gene gene2468 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12340 XM56_12345 XM56_12345 XM56_12345 2718862 2719413 - membrane protein gene gene2469 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12345 XM56_12350 XM56_12350 XM56_12350 2719410 2721062 - paraquat-inducible protein B gene gene2470 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12350 XM56_12355 XM56_12355 XM56_12355 2721049 2722266 - paraquat-inducible protein A gene gene2471 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12355 XM56_12360 XM56_12360 XM56_12360 2722485 2724398 - ABC transporter ATPase Uup%3B in Escherichia coli this cytoplasmic protein was shown to contain ATPase activity%3B mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth gene gene2472 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12360 XM56_12365 XM56_12365 rlmL rlmL 2724404 2726524 - 23S rRNA methyltransferase catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA gene gene2473 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12365 XM56_12370 XM56_12370 XM56_12370 2726627 2727736 + hypothetical protein gene gene2474 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12370 XM56_12375 XM56_12375 XM56_12375 2727752 2728309 - cell division protein ZapC gene gene2475 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12375 XM56_12380 XM56_12380 XM56_12380 2728485 2729495 - dihydroorotate dehydrogenase catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway%3B uses a flavin nucleotide as an essential cofactor%3B class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus%2C which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors gene gene2476 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12380 XM56_12385 XM56_12385 pepN pepN 2729663 2732278 - aminopeptidase N gene gene2477 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12385 XM56_12390 XM56_12390 XM56_12390 2732872 2734077 + nicotinate phosphoribosyltransferase catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate gene gene2478 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12390 XM56_12395 XM56_12395 XM56_12395 2734334 2735734 + asparaginyl-tRNA synthetase gene gene2479 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12395 XM56_12400 XM56_12400 XM56_12400 2736033 2737148 + porin allows for ions and hydrophilic solutes to cross the outer membrane gene gene2480 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12400 XM56_12405 XM56_12405 XM56_12405 2737404 2738594 + aromatic amino acid aminotransferase gene gene2481 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12405 XM56_12410 XM56_12410 hypothetical protein hypothetical protein 2738575 2738835 - disrupted pseudogene gene2482 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12410 XM56_12415 XM56_12415 XM56_12415 2738853 2740382 - diguanylate phosphodiesterase gene gene2483 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12415 XM56_12420 XM56_12420 XM56_12420 2740681 2741328 - hypothetical protein gene gene2484 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12420 XM56_12425 XM56_12425 XM56_12425 2741586 2742134 - hypothetical protein gene gene2485 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12425 XM56_12430 XM56_12430 XM56_12430 2742394 2744265 - peptidase gene gene2486 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12430 XM56_12435 XM56_12435 mukB mukB 2744589 2749034 - cell division protein MukB SMC (structural maintenance of chromosomes) family of proteins%3B involved in chromosome condensatin and partitioning%3B forms a homodimer and the C-terminal is essential for DNA-binding activity while the purified N-terminal domain binds FtsZ%3B mutations result in cell division defects gene gene2487 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12435 XM56_12440 XM56_12440 XM56_12440 2749031 2749759 - condesin subunit E acts with MukB and MukF to condense the chromosome and allow for segregation during cell division gene gene2488 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12440 XM56_12445 XM56_12445 XM56_12445 2749740 2751062 - condesin subunit F acts with MukB and MukE to condense the chromosome and allow for segregation during cell division gene gene2489 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12445 XM56_12450 XM56_12450 XM56_12450 2751059 2751844 - SAM-dependent methyltransferase gene gene2490 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12450 XM56_12455 XM56_12455 XM56_12455 2752035 2752802 + hypothetical protein gene gene2491 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12455 XM56_12460 XM56_12460 XM56_12460 2752805 2753698 - hypothetical protein gene gene2492 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12460 XM56_12465 XM56_12465 XM56_12465 2753888 2754640 - 3-deoxy-manno-octulosonate cytidylyltransferase CMP-2-keto-3-deoxyoctulosonic acid synthetase%3B catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS gene gene2493 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12465 XM56_12470 XM56_12470 XM56_12470 2754637 2754819 - hypothetical protein gene gene2494 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12470 XM56_12475 XM56_12475 XM56_12475 2755251 2755460 - cold-shock protein gene gene2495 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12475 XM56_12480 XM56_12480 XM56_12480 2755676 2755885 - cold-shock protein gene gene2496 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12480 XM56_12485 XM56_12485 XM56_12485 2756345 2757751 + hypothetical protein gene gene2497 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12485 XM56_12490 XM56_12490 lpxK lpxK 2757758 2758744 - tetraacyldisaccharide 4'-kinase transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1%2C4'-bis-phosphate gene gene2498 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12490 XM56_12495 XM56_12495 XM56_12495 2758741 2760489 - lipid transporter ATP-binding/permease involved in the transport of lipid A across the inner membrane gene gene2499 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12495 XM56_12500 XM56_12500 XM56_12500 2760525 2762810 - competence protein ComEC gene gene2500 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12500 XM56_12505 XM56_12505 ihfB ihfB 2763147 2763431 - integration host factor subunit beta This protein is one of the two subunits of integration host factor%2C a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control gene gene2501 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12505 XM56_12510 XM56_12510 rpsA rpsA 2763495 2765168 - 30S ribosomal protein S1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit%3B autoregulates expression via a C-terminal domain%3B in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats%3B the S1 nucleic acid-binding domain is found associated with other proteins gene gene2502 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12510 XM56_12515 XM56_12515 XM56_12515 2765337 2766029 - cytidylate kinase gene gene2503 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12515 XM56_12520 XM56_12520 XM56_12520 2766268 2767554 - 3-phosphoshikimate 1-carboxyvinyltransferase gene gene2504 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12520 XM56_12525 XM56_12525 XM56_12525 2767681 2768766 - 3-phosphoserine/phosphohydroxythreonine aminotransferase catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate%3B catalyzes 4 phosphohydroxy L-threonine from 2-oxo 3 hydroxy 4- phosphobutanoate%3B required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine gene gene2505 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12525 XM56_12530 XM56_12530 XM56_12530 2768973 2769665 - membrane protein gene gene2506 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12530 XM56_12535 XM56_12535 ansB ansB 2769812 2770849 - L-asparaginase II catalyzes the formation of aspartate from asparagine%2C periplasmic%3B regulated by cyclic AMP receptor protein (CRP) and also induced by anaerobiosis gene gene2507 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12535 XM56_12540 XM56_12540 XM56_12540 2770998 2772764 + ribosomal protein S12 methylthiotransferase accessory factor YcaO gene gene2508 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12540 XM56_12545 XM56_12545 XM56_12545 2773489 2774346 + formate transporter gene gene2509 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12545 XM56_12550 XM56_12550 XM56_12550 2774399 2776681 + pyruvate formate-lyase formate acetyltransferase%3B catalyzes the formation of formate and acetyl-CoA from pyruvate gene gene2510 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12550 XM56_12555 XM56_12555 pflA pflA 2776760 2777500 + pyruvate formate lyase-activating enzyme 1 activates pyruvate formate-lyase 1 under anaerobic conditions gene gene2511 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12555 XM56_12560 XM56_12560 XM56_12560 2777578 2778726 - MFS transporter gene gene2512 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12560 XM56_12565 XM56_12565 XM56_12565 2778982 2780418 - transposase gene gene2513 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12565 XM56_12570 XM56_12570 XM56_12570 2780559 2781851 - seryl-tRNA synthetase gene gene2514 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12570 XM56_12575 XM56_12575 XM56_12575 2782023 2783366 - recombination factor protein RarA gene gene2515 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12575 XM56_12580 XM56_12580 lolA lolA 2783374 2783985 - lipoprotein chaperone participates with LolB in the incorporation of lipoprotein into the outer membrane gene gene2516 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12580 XM56_12585 XM56_12585 XM56_12585 2784214 2787828 - cell division protein FtsK gene gene2517 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12585 XM56_12590 XM56_12590 XM56_12590 2787950 2788444 - leucine-responsive transcriptional regulator mediates a global response to leucine%3B acts as a regulator for several genes involved in the high-affinity branched-chain amino acid transport system gene gene2518 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12590 XM56_12595 XM56_12595 XM56_12595 2789214 2790176 + thioredoxin reductase catalyzes the transfer of electrons from NADPH to thioredoxin%3B FAD/NAD(P) binding gene gene2519 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12595 XM56_12600 XM56_12600 XM56_12600 2790451 2792217 + amino acid ABC transporter permease in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance%3B important for cytochrome bd and c gene gene2520 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12600 XM56_12605 XM56_12605 XM56_12605 2792220 2793944 + amino acid ABC transporter permease in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance%3B important for cytochrome bd and c gene gene2521 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12605 XM56_12610 XM56_12610 XM56_12610 2794178 2794888 + leucyl/phenylalanyl-tRNA--protein transferase gene gene2522 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12610 XM56_12615 XM56_12615 XM56_12615 2795054 2795272 + translation initiation factor IF-1 gene gene2523 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12615 XM56_12620 XM56_12620 clpA clpA 2795517 2797793 - Clp protease ClpX ATPase and specificity subunit of the ClpA-ClpP ATP dependent serine protease%3B directs protease to specific substrates gene gene2524 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12620 XM56_12625 XM56_12625 clpS clpS 2797819 2798139 - Clp protease ClpS involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation%3B binds to the N-terminal domain of the chaperone ClpA gene gene2525 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12625 XM56_12630 XM56_12630 XM56_12630 2798499 2798756 + stationary phase/starvation inducible regulatory protein CspD inhibits DNA replication at both initiation and elongation steps%3B stationary phase and starvation inducible gene gene2526 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12630 XM56_12635 XM56_12635 XM56_12635 2798955 2800904 - macrolide transporter with MacA is involved in the export of macrolide gene gene2527 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12635 XM56_12640 XM56_12640 XM56_12640 2800904 2802016 - macrolide transporter confers macrolide resistance via active drug efflux gene gene2528 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12640 XM56_12645 XM56_12645 XM56_12645 2802208 2803191 + virulence factor gene gene2529 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12645 XM56_12650 XM56_12650 XM56_12650 2803188 2804852 - hypothetical protein gene gene2530 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12650 XM56_12655 XM56_12655 XM56_12655 2805103 2806002 + membrane protein gene gene2531 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12655 XM56_12660 XM56_12660 XM56_12660 2806199 2807851 + hydroxylamine reductase gene gene2532 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12660 XM56_12665 XM56_12665 XM56_12665 2807950 2808972 + HCP oxidoreductase gene gene2533 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12665 XM56_12670 XM56_12670 XM56_12670 2809072 2810793 + pyruvate dehydrogenase catalyzes the formation of acetate from pyruvate gene gene2534 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12670 XM56_12675 XM56_12675 XM56_12675 2811025 2811912 + methyltransferase gene gene2535 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12675 XM56_12680 XM56_12680 XM56_12680 2812050 2813069 + threonine aldolase low- specificity%3B catalyzes the formation of acetaldehyde and glycine from L-threonine%3B acts on L-threonine%2C L-allo-threonine%2C L-threo-phenylserine%2C and L-erythro-phenylserine gene gene2536 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12680 XM56_12685 XM56_12685 XM56_12685 2813066 2814523 + hypothetical protein gene gene2537 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12685 XM56_12690 XM56_12690 XM56_12690 2814655 2815665 + hypothetical protein gene gene2538 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12690 XM56_12695 XM56_12695 XM56_12695 2815734 2816309 + lipoprotein induced during stationary phase and by acivicin (a glutamine analog)%3B regulated by Lrp and RpoS gene gene2539 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12695 XM56_12700 XM56_12700 XM56_12700 2816712 2817461 + arginine ABC transporter ATP-binding protein gene gene2540 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12700 XM56_12705 XM56_12705 XM56_12705 2817482 2818213 + arginine ABC transporter substrate-binding protein with ArtPMQI is involved in arginine transport gene gene2541 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12705 XM56_12710 XM56_12710 XM56_12710 2818225 2818941 + arginine transporter permease subunit ArtQ with ArtPMJI transports arginine across the inner membrane gene gene2542 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12710 XM56_12715 XM56_12715 artM artM 2818941 2819609 + arginine transporter permease subunit ArtM with ArtPQJI acts to transport arginine across the inner membrane gene gene2543 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12715 XM56_12720 XM56_12720 XM56_12720 2820294 2821043 + arginine ABC transporter substrate-binding protein with ArtPMQI is involved in arginine transport gene gene2544 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12720 XM56_12725 XM56_12725 rumB rumB 2821163 2822290 - 23S rRNA methyltransferase RNA uridine methyltransferase B%3B catalyzes the formation of 5-methyl-uridine at position 747 in 23S rRNA gene gene2545 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12725 XM56_12730 XM56_12730 XM56_12730 2822379 2822855 - membrane protein gene gene2546 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12730 XM56_12735 XM56_12735 XM56_12735 2823005 2823850 - spermidine/putrescine ABC transporter permease gene gene2547 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12735 XM56_12740 XM56_12740 XM56_12740 2823847 2824812 - spermidine/putrescine ABC transporter permease gene gene2548 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12740 XM56_12745 XM56_12745 potG potG 2824834 2825967 - putrescine transporter ATP-binding subunit part of the PotFGHI ATP-dependent putrescine transporter gene gene2549 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12745 XM56_12750 XM56_12750 XM56_12750 2826134 2827243 - spermidine/putrescine ABC transporter substrate-binding protein gene gene2550 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12750 XM56_12755 XM56_12755 XM56_12755 2827689 2828174 - sensory transduction regulator gene gene2551 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12755 XM56_12760 XM56_12760 XM56_12760 2828293 2828601 - membrane protein gene gene2552 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12760 XM56_12765 XM56_12765 XM56_12765 2828916 2829179 + glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase%3B also involved in reducing some disulfides in a coupled system with glutathione reductase gene gene2553 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12765 XM56_12770 XM56_12770 XM56_12770 2829589 2831277 + transporter gene gene2554 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12770 XM56_12775 XM56_12775 XM56_12775 2831649 2832320 + phosphoesterase gene gene2555 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12775 XM56_12780 XM56_12780 XM56_12780 2832317 2832925 + UDP-diphosphatase gene gene2556 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12780 XM56_12785 XM56_12785 XM56_12785 2833201 2833872 + deoxyribose-phosphate aldolase gene gene2557 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12785 XM56_12790 XM56_12790 XM56_12790 2834060 2834824 + transcriptional regulator gene gene2558 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12790 XM56_12795 XM56_12795 XM56_12795 2836084 2837379 + serine/threonine protein kinase gene gene2559 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12795 XM56_12800 XM56_12800 XM56_12800 2837525 2838892 + serine dehydratase catalyzes the formation of pyruvate from serine gene gene2560 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12800 XM56_12805 XM56_12805 XM56_12805 2839303 2840322 - transposase gene gene2561 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12805 XM56_12810 XM56_12810 XM56_12810 2840513 2841706 - D-alanyl-D-alanine carboxypeptidase penicillin-binding protein 5%3B removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors gene gene2562 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12810 XM56_12815 XM56_12815 XM56_12815 2842123 2843490 + cystathionine beta-synthase gene gene2563 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12815 XM56_12820 XM56_12820 XM56_12820 2843516 2844661 + cystathionine beta-lyase gene gene2564 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12820 XM56_12825 XM56_12825 XM56_12825 2844778 2845449 - metal ABC transporter permease gene gene2565 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12825 XM56_12830 XM56_12830 XM56_12830 2845446 2846432 - methionine ABC transporter ATP-binding protein gene gene2566 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12830 XM56_12835 XM56_12835 XM56_12835 2846429 2847253 - metal ABC transporter substrate-binding protein gene gene2567 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12835 XM56_12840 XM56_12840 XM56_12840 2847306 2848382 - 2-oxobutyrate oxidase gene gene2568 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12840 XM56_12845 XM56_12845 XM56_12845 2848843 2849502 + hydrolase gene gene2569 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12845 XM56_12850 XM56_12850 XM56_12850 2849521 2850141 + glutathione S-transferase gene gene2570 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12850 XM56_12855 XM56_12855 XM56_12855 2850320 2852293 - outer membrane siderophore receptor YiuR%3B outer membrane siderophore receptor gene gene2571 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12855 XM56_12860 XM56_12860 XM56_12860 2852517 2853305 - iron ABC transporter ATP-binding protein gene gene2572 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12860 XM56_12865 XM56_12865 XM56_12865 2853302 2854384 - iron-siderophore ABC transporter permease gene gene2573 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12865 XM56_12870 XM56_12870 XM56_12870 2854659 2856185 - lysine transporter gene gene2574 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12870 XM56_12875 XM56_12875 XM56_12875 2856430 2857302 - transcriptional regulator gene gene2575 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12875 XM56_12880 XM56_12880 XM56_12880 2857599 2857895 - hypothetical protein gene gene2576 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12880 XM56_12885 XM56_12885 XM56_12885 2858212 2859477 + hydrolase gene gene2577 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12885 XM56_12890 XM56_12890 XM56_12890 2860198 2861280 + membrane protein gene gene2578 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12890 XM56_12895 XM56_12895 XM56_12895 2861769 2862614 + endonuclease IV Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues gene gene2579 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12895 XM56_12900 XM56_12900 XM56_12900 2862682 2865207 - usher protein gene gene2580 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12900 XM56_12905 XM56_12905 XM56_12905 2865258 2866061 - molecular chaperone gene gene2581 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12905 XM56_12910 XM56_12910 XM56_12910 2866194 2866673 - fimbrial protein gene gene2582 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12910 XM56_12915 XM56_12915 XM56_12915 2866934 2867425 - protein psaF gene gene2583 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12915 XM56_12920 XM56_12920 XM56_12920 2867422 2868087 - protein psaE gene gene2584 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12920 XM56_12925 XM56_12925 XM56_12925 2868353 2870032 - PTS system fructose-specific transporter subunits IIBC phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel gene gene2585 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12925 XM56_12930 XM56_12930 fruK fruK 2870047 2870985 - 1-phosphofructokinase converts fructose-1-phosphate and ATP to fructose-1%2C6-bisphosphate and ADP%3B highly specific for fructose-1-phopshate%3B similar to PfkB%3B forms homodimers gene gene2586 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12930 XM56_12935 XM56_12935 XM56_12935 2870982 2872115 - bifunctional PTS system fructose-specific transporter subunit IIA/HPr protein phosphoenolpyruvate (PEP)-dependent%2C sugar transporting phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIA is phosphorylated by phospho-HPr which then transfers the phosphoryl group to the IIB component gene gene2587 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12935 XM56_12940 XM56_12940 XM56_12940 2872376 2872798 + ADP-ribose pyrophosphatase gene gene2588 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12940 XM56_12945 XM56_12945 XM56_12945 2873099 2874247 + cytochrome C gene gene2589 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12945 XM56_12950 XM56_12950 XM56_12950 2874261 2876741 + trimethylamine N-oxide reductase I catalytic subunit catalyzes the reduction of trimethylamine-N-oxide to form trimethylamine gene gene2590 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12950 XM56_12955 XM56_12955 XM56_12955 2876911 2877165 - hypothetical protein gene gene2591 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12955 XM56_12960 XM56_12960 XM56_12960 2877632 2878876 + tryptophan permease tryptophan transporter of high affinity gene gene2592 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12960 XM56_12965 XM56_12965 XM56_12965 2879106 2879678 + elongation factor P Stimulates the peptidyltransferase activity of the 70S ribosome and enhances dipeptide synthesis with N-formylmethionyl-tRNA and puromycin in vitro%2C suggesting its involvement in the formation of the first peptide bond of a protein gene gene2593 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12965 XM56_12970 XM56_12970 XM56_12970 2879955 2881145 - mannonate dehydratase catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate gene gene2594 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12970 XM56_12975 XM56_12975 XM56_12975 2881316 2881498 + hypothetical protein gene gene2595 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12975 XM56_12980 XM56_12980 XM56_12980 2881573 2883045 + D-mannonate oxidoreductase gene gene2596 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12980 XM56_12985 XM56_12985 XM56_12985 2883145 2883888 - transcriptional regulator regulates the expression of uxuBA gene gene2597 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12985 XM56_12990 XM56_12990 XM56_12990 2884096 2884422 - membrane protein gene gene2598 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12990 XM56_12995 XM56_12995 XM56_12995 2884734 2885717 + hypothetical protein gene gene2599 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_12995 XM56_13000 XM56_13000 XM56_13000 2885781 2886482 + membrane protein gene gene2600 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13000 XM56_13005 XM56_13005 spr spr 2886861 2887445 + membrane protein mutational suppressor of prc thermosensitivity gene gene2601 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13005 XM56_13010 XM56_13010 XM56_13010 2887453 2887680 - hypothetical protein gene gene2602 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13010 XM56_13015 XM56_13015 XM56_13015 2887968 2889530 + phage resistance protein involved in resistance to the phages N4 and lambda gene gene2603 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13015 XM56_13020 XM56_13020 XM56_13020 2889629 2891437 + antibiotic ABC transporter substrate-binding protein with YejBEF is involved in resistance to microcin C gene gene2604 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13020 XM56_13025 XM56_13025 XM56_13025 2891447 2892547 + microcin ABC transporter permease with YejAEF is involved in resistance to microcin C gene gene2605 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13025 XM56_13030 XM56_13030 XM56_13030 2892544 2893572 + microcin ABC transporter permease part of the microcin C transport system gene gene2606 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13030 XM56_13035 XM56_13035 XM56_13035 2893574 2895166 + microcin ABC transporter ATP-binding protein with YejAEF is involved in resistance to microcin C gene gene2607 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13035 XM56_13040 XM56_13040 XM56_13040 2895238 2895585 - hypothetical protein gene gene2608 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13040 XM56_13045 XM56_13045 XM56_13045 2896438 2897661 - bicyclomycin/multidrug efflux system Involved in sulfonamide (sulfathiazole) and bicyclomycin resistance gene gene2609 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13045 XM56_13050 XM56_13050 XM56_13050 2897760 2898467 - 16S rRNA pseudouridylate synthase catalyzes the synthesis pseudouridine from uracil-516 in 16S ribosomal RNA gene gene2610 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13050 XM56_13055 XM56_13055 XM56_13055 2898929 2900686 + hypothetical protein gene gene2611 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13055 XM56_13060 XM56_13060 XM56_13060 2900848 2901135 + 50S ribosomal protein L25 the Ctc family of proteins consists of two types%2C one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response gene gene2612 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13060 XM56_13065 XM56_13065 XM56_13065 2901217 2902218 - nucleoid-associated protein NdpA gene gene2613 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13065 XM56_13070 XM56_13070 XM56_13070 2902396 2902623 + hypothetical protein gene gene2614 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13070 XM56_13075 XM56_13075 XM56_13075 2902651 2904444 + membrane protein gene gene2615 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13075 XM56_13080 XM56_13080 XM56_13080 2904542 2904618 + tRNA-Pro tRNA gene2616 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13080 XM56_13085 XM56_13085 XM56_13085 2904998 2905453 + membrane protein gene gene2617 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13085 XM56_13090 XM56_13090 XM56_13090 2905447 2905773 + hypothetical protein gene gene2618 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13090 XM56_13095 XM56_13095 XM56_13095 2905840 2907042 + transposase gene gene2619 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13095 XM56_13100 XM56_13100 XM56_13100 2907110 2907760 - beta-fimbriae major subunit gene gene2620 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13100 XM56_13105 XM56_13105 transposase transposase 2908178 2908489 + disrupted pseudogene gene2621 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13105 XM56_13110 XM56_13110 XM56_13110 2908534 2908938 + DNA-binding protein gene gene2622 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13110 XM56_13115 XM56_13115 transposase transposase 2909303 2909995 + disrupted pseudogene gene2623 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13115 XM56_13120 XM56_13120 XM56_13120 2910434 2911465 + methyltransferase gene gene2624 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13120 XM56_13125 XM56_13125 XM56_13125 2911714 2912448 - carbonic anhydrase gene gene2625 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13125 XM56_13130 XM56_13130 XM56_13130 2912724 2914160 - aryl-phospho-beta-D-glucosidase gene gene2626 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13130 XM56_13135 XM56_13135 XM56_13135 2914264 2915790 - PTS-system permease gene gene2627 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13135 XM56_13140 XM56_13140 XM56_13140 2915956 2916696 - transcriptional regulator gene gene2628 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13140 XM56_13145 XM56_13145 XM56_13145 2916788 2917159 - ATP-binding protein gene gene2629 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13145 XM56_13150 XM56_13150 XM56_13150 2917466 2917795 - hypothetical protein gene gene2630 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13150 XM56_13155 XM56_13155 XM56_13155 2917796 2918110 - hypothetical protein gene gene2631 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13155 XM56_13160 XM56_13160 XM56_13160 2918221 2918700 - antitermination protein Q gene gene2632 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13160 XM56_13165 XM56_13165 XM56_13165 2918974 2919597 + peptidase S24 gene gene2633 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13165 XM56_13170 XM56_13170 XM56_13170 2919944 2920186 + virulence protein MsgA gene gene2634 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13170 XM56_13175 XM56_13175 XM56_13175 2920351 2921286 + protease gene gene2635 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13175 XM56_13180 XM56_13180 XM56_13180 2921613 2923400 + chemotaxis protein gene gene2636 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13180 XM56_13185 XM56_13185 XM56_13185 2923470 2924459 - beta-lactamase gene gene2637 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13185 XM56_13190 XM56_13190 XM56_13190 2924873 2926399 + major facilitator transporter gene gene2638 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13190 XM56_13195 XM56_13195 XM56_13195 2926579 2927721 + beta-lactam-binding protein this protein has no known enzymatic function gene gene2639 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13195 XM56_13200 XM56_13200 XM56_13200 2927813 2927888 - tRNA-Thr tRNA gene2640 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13200 XM56_13205 XM56_13205 XM56_13205 2927895 2927982 - tRNA-Ser tRNA gene2641 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13205 XM56_13210 XM56_13210 XM56_13210 2928236 2929339 - membrane protein gene gene2642 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13210 XM56_13215 XM56_13215 XM56_13215 2930006 2930371 - hypothetical protein gene gene2643 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13215 XM56_13220 XM56_13220 XM56_13220 2930371 2930520 - membrane protein gene gene2644 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13220 XM56_13225 XM56_13225 XM56_13225 2930532 2930804 - hypothetical protein gene gene2645 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13225 XM56_13230 XM56_13230 XM56_13230 2931788 2932942 + MFS transporter gene gene2646 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13230 XM56_13235 XM56_13235 XM56_13235 2932965 2935658 + tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase gene gene2647 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13235 XM56_13240 XM56_13240 XM56_13240 2935661 2936308 + transcriptional regulator two-component response regulator RscB regulates the genes involved in capsule biosynthesis and cell division%3B probably phosphorylated by RcsC or RcsF gene gene2648 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13240 XM56_13245 XM56_13245 XM56_13245 2936570 2939437 - histidine kinase gene gene2649 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13245 XM56_13250 XM56_13250 XM56_13250 2939702 2940721 + transposase gene gene2650 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13250 XM56_13255 XM56_13255 XM56_13255 2941116 2943773 - DNA gyrase subunit A gene gene2651 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13255 XM56_13260 XM56_13260 XM56_13260 2943977 2944705 + 3-demethylubiquinone-9 3-methyltransferase Involved in ubiquinone biosynthesis gene gene2652 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13260 XM56_13265 XM56_13265 XM56_13265 2945222 2947507 + ribonucleotide-diphosphate reductase subunit alpha Catalyzes the rate-limiting step in dNTP synthesis gene gene2653 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13265 XM56_13270 XM56_13270 XM56_13270 2947593 2948723 + ribonucleotide-diphosphate reductase subunit beta B2 or R2 protein%3B type 1a enzyme%3B catalyzes the rate-limiting step in dNTP synthesis%3B converts nucleotides to deoxynucleotides%3B forms a homodimer and then a multimeric complex with NrdA gene gene2654 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13270 XM56_13275 XM56_13275 XM56_13275 2948803 2949108 + 2Fe-2S ferredoxin gene gene2655 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13275 XM56_13280 XM56_13280 XM56_13280 2949368 2949874 + ecotin serine protease inhibitor%2C inhibits trypsin and other proteases gene gene2656 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13280 XM56_13285 XM56_13285 XM56_13285 2949961 2955381 - serine protease gene gene2657 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13285 XM56_13290 XM56_13290 XM56_13290 2955393 2956142 - hypothetical protein gene gene2658 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13290 XM56_13295 XM56_13295 XM56_13295 2956377 2957579 - hypothetical protein gene gene2659 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13295 XM56_13300 XM56_13300 XM56_13300 2957933 2959141 + tyrosine transporter TyrP tyrosine specific permease gene gene2660 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13300 XM56_13305 XM56_13305 XM56_13305 2959339 2959881 - porin gene gene2661 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13305 XM56_13310 XM56_13310 XM56_13310 2960236 2961678 + catalase gene gene2662 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13310 XM56_13315 XM56_13315 XM56_13315 2962328 2963722 - O-succinylbenzoic acid--CoA ligase gene gene2663 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13315 XM56_13320 XM56_13320 XM56_13320 2963710 2964681 - O-succinylbenzoate synthase catalyzes the dehydration of 2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylic acid to form O-succinylbenzoate gene gene2664 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13320 XM56_13325 XM56_13325 XM56_13325 2964681 2965538 - dihydroxynaphthoic acid synthetase catalyzes the formation of 1%2C4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA gene gene2665 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13325 XM56_13330 XM56_13330 XM56_13330 2965552 2966376 - 2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase gene gene2666 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13330 XM56_13335 XM56_13335 XM56_13335 2966373 2968046 - 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase SEPHCHC synthase%3B forms 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1-carboxylate from 2-oxoglutarate and isochorismate in menaquinone biosynthesis gene gene2667 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13335 XM56_13340 XM56_13340 XM56_13340 2968275 2969639 - isochorismate synthase gene gene2668 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13340 XM56_13345 XM56_13345 XM56_13345 2969873 2971075 - transposase gene gene2669 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13345 XM56_13350 XM56_13350 XM56_13350 2971178 2971486 - hypothetical protein gene gene2670 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13350 XM56_13355 XM56_13355 phosphogluconate dehydratase phosphogluconate dehydratase 2971703 2973507 - disrupted pseudogene gene2671 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13355 XM56_13360 XM56_13360 XM56_13360 2973517 2974023 - hypothetical protein gene gene2672 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13360 XM56_13365 XM56_13365 XM56_13365 2974085 2975401 - 2-ketogluconate transporter gene gene2673 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13365 XM56_13370 XM56_13370 XM56_13370 2975576 2976541 - dihydrofolate reductase gene gene2674 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13370 XM56_13375 XM56_13375 transcriptional regulator transcriptional regulator 2976924 2977916 - disrupted pseudogene gene2675 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13375 XM56_13380 XM56_13380 XM56_13380 2978419 2979183 + gluconate 5-dehydrogenase Involved in the nonphosphorylative%2C ketogenic oxidation of glucose and oxidizes gluconate to 5-ketogluconate gene gene2676 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13380 XM56_13385 XM56_13385 idnK idnK 2979396 2979926 + gluconate kinase gene gene2677 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13385 XM56_13390 XM56_13390 XM56_13390 2979967 2980434 + hypothetical protein gene gene2678 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13390 XM56_13395 XM56_13395 XM56_13395 2981231 2981722 - membrane protein gene gene2679 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13395 XM56_13400 XM56_13400 XM56_13400 2981866 2982687 - hypothetical protein gene gene2680 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13400 XM56_13405 XM56_13405 XM56_13405 2982891 2984348 - NADH:ubiquinone oxidoreductase subunit N Catalyzes the transfer of electrons from NADH to quinone gene gene2681 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13405 XM56_13410 XM56_13410 XM56_13410 2984355 2985893 - NADH:ubiquinone oxidoreductase subunit M gene gene2682 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13410 XM56_13415 XM56_13415 XM56_13415 2985912 2987756 - NADH:ubiquinone oxidoreductase subunit L Catalyzes the transfer of electrons from NADH to ubiquinone gene gene2683 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13415 XM56_13420 XM56_13420 XM56_13420 2987753 2988055 - hypothetical protein gene gene2684 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13420 XM56_13425 XM56_13425 XM56_13425 2988052 2988597 - NADH:ubiquinone oxidoreductase subunit J Catalyzes the transfer of electrons from NADH to quinone gene gene2685 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13425 XM56_13430 XM56_13430 XM56_13430 2988610 2989152 - NADH dehydrogenase gene gene2686 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13430 XM56_13435 XM56_13435 XM56_13435 2989167 2990144 - NADH:ubiquinone oxidoreductase gene gene2687 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13435 XM56_13440 XM56_13440 XM56_13440 2990141 2992885 - NADH dehydrogenase Catalyzes the transfer of electrons from NADH to quinone gene gene2688 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13440 XM56_13445 XM56_13445 XM56_13445 2993113 2994480 - NADH dehydrogenase part of NADH-ubiquinone oxidoreductase complex I%3B shuttles electrons from NADH%2C via FMN and iron-sulfur (Fe-S) centers%2C to quinones in the respiratory chain%3B NuoF is part of the soluble NADH dehydrogenase fragment%2C which represents the electron input part of NADH dehydrogenase gene gene2689 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13445 XM56_13450 XM56_13450 XM56_13450 2994477 2995040 - NADH dehydrogenase Catalyzes the transfer of electrons from NADH to quinone gene gene2690 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13450 XM56_13455 XM56_13455 XM56_13455 2995043 2996839 - NADH:ubiquinone oxidoreductase NuoCD%3B NDH-1 shuttles electrons from NADH%2C via FMN and iron-sulfur (Fe-S) centers%2C to quinones in the respiratory chain%3B subunits NuoCD%2C E%2C F%2C and G constitute the peripheral sector of the complex%3B in Escherichia coli this gene encodes a fusion protein of NuoC and NuoD that are found separate in other organisms gene gene2691 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13455 XM56_13460 XM56_13460 XM56_13460 2996979 2997656 - NADH dehydrogenase gene gene2692 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13460 XM56_13465 XM56_13465 XM56_13465 2997778 2998269 - NADH:ubiquinone oxidoreductase subunit A gene gene2693 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13465 XM56_13470 XM56_13470 XM56_13470 2998946 2999878 - transcriptional regulator gene gene2694 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13470 XM56_13475 XM56_13475 XM56_13475 3000742 3001956 + aminotransferase broad specificity%3B family IV%3B in Corynebacterium glutamicum this protein can use glutamate%2C 2-aminobutyrate%2C and aspartate as amino donors and pyruvate as the acceptor gene gene2695 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13475 XM56_13480 XM56_13480 XM56_13480 3002720 3003313 + 5'-nucleotidase gene gene2696 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13480 XM56_13485 XM56_13485 XM56_13485 3003545 3005380 - citrate transporter gene gene2697 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13485 XM56_13490 XM56_13490 hypothetical protein hypothetical protein 3005743 3006540 + disrupted pseudogene gene2698 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13490 XM56_13495 XM56_13495 XM56_13495 3006731 3007387 - phosphatase gene gene2699 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13495 XM56_13500 XM56_13500 XM56_13500 3007434 3007928 - hypothetical protein gene gene2700 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13500 XM56_13505 XM56_13505 XM56_13505 3008097 3008552 - hypothetical protein gene gene2701 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13505 XM56_13510 XM56_13510 XM56_13510 3008985 3010187 + acetate kinase AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation%3B utilizes magnesium and ATP%3B also involved in conversion of acetate to aceyl-CoA%3B also known to act on propionate gene gene2702 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13510 XM56_13515 XM56_13515 XM56_13515 3010483 3012621 + phosphate acetyltransferase catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate%3B when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate gene gene2703 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13515 XM56_13520 XM56_13520 XM56_13520 3013202 3014233 - LacI family transcriptional regulator gene gene2704 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13520 XM56_13525 XM56_13525 cmtB cmtB 3014479 3014922 + PTS system mannitol-specific transporter subunit IIA TolM%3B with CmtA (IIBC)%2C CmtB possibly forms the mannitol-like permease component of the cryptic mannitol phosphotransferase system%2C which phosphorylates and transports various carbohydrates and polyhydric alcohols in Escherichia coli%3B cytoplasmic protein gene gene2705 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13525 XM56_13530 XM56_13530 XM56_13530 3014965 3015252 + PTS ascorbate transporter subunit IIB gene gene2706 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13530 XM56_13535 XM56_13535 XM56_13535 3015265 3016521 + PTS beta-glucoside transporter subunit IIBC gene gene2707 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13535 XM56_13540 XM56_13540 XM56_13540 3016725 3017744 + transposase gene gene2708 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13540 XM56_13545 XM56_13545 XM56_13545 3018121 3018669 - NUDIX hydrolase gene gene2709 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13545 XM56_13550 XM56_13550 XM56_13550 3018741 3019295 - phosphodiesterase gene gene2710 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13550 XM56_13555 XM56_13555 XM56_13555 3019516 3020208 - diguanylate phosphodiesterase gene gene2711 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13555 XM56_13560 XM56_13560 XM56_13560 3020717 3021625 + epimerase gene gene2712 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13560 XM56_13565 XM56_13565 XM56_13565 3021696 3028022 - RTX-family protein gene gene2713 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13565 XM56_13570 XM56_13570 XM56_13570 3028280 3029077 - amino acid transporter gene gene2714 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13570 XM56_13575 XM56_13575 XM56_13575 3029113 3029829 - amino acid ABC transporter permease with HisJPQ is involved in transport of histidine%2C lysine%2C arginine and ornithine gene gene2715 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13575 XM56_13580 XM56_13580 XM56_13580 3029826 3030512 - amino acid ABC transporter permease with HisJMP is involved in the transport of histidine/lysine/arginine/ornithine gene gene2716 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13580 XM56_13585 XM56_13585 XM56_13585 3030617 3031399 - histidine ABC transporter substrate-binding protein HisJ with HisPMQ is involved in the transport of histidine gene gene2717 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13585 XM56_13590 XM56_13590 XM56_13590 3031708 3032280 - 3-octaprenyl-4-hydroxybenzoate carboxy-lyase catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate gene gene2718 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13590 XM56_13595 XM56_13595 XM56_13595 3032610 3034127 - amidophosphoribosyltransferase Catalyzes first step of the de novo purine nucleotide biosynthetic pathway gene gene2719 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13595 XM56_13600 XM56_13600 XM56_13600 3034140 3034649 - colicin V production protein membrane protein required for colicin V production gene gene2720 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13600 XM56_13605 XM56_13605 XM56_13605 3034955 3035674 - cell division protein DedD gene gene2721 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13605 XM56_13610 XM56_13610 XM56_13610 3035714 3036982 - bifunctional folylpolyglutamate synthase/ dihydrofolate synthase gene gene2722 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13610 XM56_13615 XM56_13615 XM56_13615 3037218 3038129 - acetyl-CoA carboxylase subunit beta catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer of AccA2D2 subunits gene gene2723 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13615 XM56_13620 XM56_13620 XM56_13620 3038360 3039022 - hypothetical protein gene gene2724 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13620 XM56_13625 XM56_13625 truA truA 3039154 3039960 - tRNA pseudouridine synthase A mediates pseudouridylation (positions 38%2C 39%2C 40) at the tRNA anticodon region which contributes to the structural stability gene gene2725 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13625 XM56_13630 XM56_13630 XM56_13630 3039996 3041006 - semialdehyde dehydrogenase gene gene2726 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13630 XM56_13635 XM56_13635 XM56_13635 3041278 3042405 - phosphoglycerate dehydrogenase gene gene2727 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13635 XM56_13640 XM56_13640 XM56_13640 3042624 3043409 - AraC family transcriptional regulator gene gene2728 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13640 XM56_13645 XM56_13645 XM56_13645 3043582 3044463 + multidrug DMT transporter gene gene2729 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13645 XM56_13650 XM56_13650 XM56_13650 3044473 3045516 - membrane protein gene gene2730 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13650 XM56_13655 XM56_13655 XM56_13655 3045698 3047155 + GntR family transcriptional regulator gene gene2731 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13655 XM56_13660 XM56_13660 XM56_13660 3047212 3047712 - alkyl hydroperoxide reductase gene gene2732 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13660 XM56_13665 XM56_13665 XM56_13665 3047709 3048434 - copper-sensitivity protein C gene gene2733 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13665 XM56_13670 XM56_13670 XM56_13670 3048431 3050491 - protein-disulfide reductase gene gene2734 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13670 XM56_13675 XM56_13675 XM56_13675 3050542 3050895 - copper resistance protein gene gene2735 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13675 XM56_13680 XM56_13680 XM56_13680 3051198 3052235 + flagella biosynthesis regulator gene gene2736 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13680 XM56_13685 XM56_13685 XM56_13685 3052302 3053435 - membrane protein gene gene2737 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13685 XM56_13690 XM56_13690 XM56_13690 3053551 3054852 - glucose-1-phosphatase gene gene2738 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13690 XM56_13695 XM56_13695 XM56_13695 3055126 3056082 - LacI family transcriptional regulator gene gene2739 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13695 XM56_13700 XM56_13700 XM56_13700 3056434 3056748 + PTS lactose transporter subunit IIB gene gene2740 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13700 XM56_13705 XM56_13705 XM56_13705 3056761 3058092 + cytochrome C biogenesis protein CcmF gene gene2741 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13705 XM56_13710 XM56_13710 XM56_13710 3058109 3059491 + 6-phospho-beta-glucosidase gene gene2742 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13710 XM56_13715 XM56_13715 XM56_13715 3059506 3059808 + molecular chaperone TorD gene gene2743 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13715 XM56_13720 XM56_13720 XM56_13720 3060195 3061589 + LamB gene gene2744 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13720 XM56_13725 XM56_13725 XM56_13725 3061789 3062487 + aspartate racemase gene gene2745 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13725 XM56_13730 XM56_13730 XM56_13730 3062525 3063532 - histidine kinase gene gene2746 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13730 XM56_13735 XM56_13735 XM56_13735 3063952 3065175 - 3-oxoacyl-ACP synthase FabB%2C beta-Ketoacyl-ACP synthase I%2C KASI%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP gene gene2747 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13735 XM56_13740 XM56_13740 mnmC mnmC 3065347 3067410 + FAD-dependent oxidoreductase 5-methylaminomethyl-2-thiouridine-forming enzyme methyltransferase/FAD-dependent demodification enzyme gene gene2748 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13740 XM56_13745 XM56_13745 XM56_13745 3067569 3067850 - hypothetical protein gene gene2749 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13745 XM56_13750 XM56_13750 XM56_13750 3067914 3068456 - elongation factor P hydroxylase gene gene2750 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13750 XM56_13755 XM56_13755 XM56_13755 3068763 3069569 - hypothetical protein gene gene2751 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13755 XM56_13760 XM56_13760 mepA mepA 3069573 3070400 - murein endopeptidase D-alanyl-D-alanine endopeptidase%3B functions in hydrolyzing cell wall peptidoglycan%3B similar to LAS metallopeptidases%3B forms a dimer in periplasm gene gene2752 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13760 XM56_13765 XM56_13765 XM56_13765 3070406 3071491 - chorismate synthase catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis gene gene2753 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13765 XM56_13770 XM56_13770 XM56_13770 3071568 3072500 - SAM-dependent methyltransferase involved in methylation of ribosomal protein L3 gene gene2754 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13770 XM56_13775 XM56_13775 XM56_13775 3072707 3073237 + hypothetical protein gene gene2755 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13775 XM56_13780 XM56_13780 XM56_13780 3073539 3074030 - phosphohistidine phosphatase gene gene2756 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13780 XM56_13785 XM56_13785 fadJ fadJ 3074413 3076650 - multifunctional fatty acid oxidation complex subunit alpha multifunctional enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase%3B catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA%3B exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities: forms a heterotetramer with FadI%3B similar to FadA2B2 complex%3B involved in the anaerobic degradation of long and medium-chain fatty acids in the presence of nitrate gene gene2757 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13785 XM56_13790 XM56_13790 XM56_13790 3076650 3077960 - 3-ketoacyl-CoA thiolase gene gene2758 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13790 XM56_13795 XM56_13795 XM56_13795 3078269 3078580 - hypothetical protein gene gene2759 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13795 XM56_13800 XM56_13800 XM56_13800 3079011 3080282 + long-chain fatty acid outer membrane transporter gene gene2760 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13800 XM56_13805 XM56_13805 XM56_13805 3080375 3081151 - ABC transporter permease involved in maintaining OM lipid asymmetry gene gene2761 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13805 XM56_13810 XM56_13810 XM56_13810 3081176 3082396 - cytochrome C gene gene2762 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13810 XM56_13815 XM56_13815 XM56_13815 3082396 3082902 - cytochrome C gene gene2763 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13815 XM56_13820 XM56_13820 XM56_13820 3082899 3083465 - thiol:disulfide interchange protein DsbE cytochrome c-type biogenesis thioredoxin%3B involved in the reduction of disulfide bonds to allow heme bonding gene gene2764 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13820 XM56_13825 XM56_13825 XM56_13825 3083465 3085432 - cytochrome C biogenesis protein CcmF cytochrome c-type biogenesis protein%3B required for the transfer of heme to apocytochrome c gene gene2765 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13825 XM56_13830 XM56_13830 XM56_13830 3085429 3085923 - cytochrome C biogenesis protein CcmE CycJ%3B periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes%3B requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome%3B part of the cytochrome c maturation system%3B periplasmic protein anchored to the inner membrane gene gene2766 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13830 XM56_13835 XM56_13835 XM56_13835 3085920 3086168 - heme exporter protein D gene gene2767 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13835 XM56_13840 XM56_13840 XM56_13840 3086165 3086902 - heme ABC transporter permease with CcmABDE is involved in the transport of protoheme IX%3B CcmC is required for heme transfer to CcmE gene gene2768 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13840 XM56_13845 XM56_13845 XM56_13845 3087073 3087732 - heme ABC transporter permease with CcmABCE is involved in the transport of protoheme IX%3B CcmB is required for the release of holoCcmE from CcmC gene gene2769 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13845 XM56_13850 XM56_13850 XM56_13850 3087732 3088358 - cytochrome C biogenesis protein CcmA gene gene2770 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13850 XM56_13855 XM56_13855 XM56_13855 3088740 3089759 + transposase gene gene2771 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13855 XM56_13860 XM56_13860 XM56_13860 3090191 3091102 + membrane protein gene gene2772 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13860 XM56_13865 XM56_13865 XM56_13865 3091275 3091349 + tRNA-Arg tRNA gene2773 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13865 XM56_13870 XM56_13870 XM56_13870 3091512 3092675 + integrase gene gene2774 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13870 XM56_13875 XM56_13875 XM56_13875 3092706 3093695 - hypothetical protein gene gene2775 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13875 XM56_13880 XM56_13880 XM56_13880 3093710 3094516 - hypothetical protein gene gene2776 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13880 XM56_13885 XM56_13885 XM56_13885 3095108 3095455 - transcriptional regulator gene gene2777 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13885 XM56_13890 XM56_13890 XM56_13890 3095767 3098451 - alkaline-shock protein gene gene2778 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13890 XM56_13895 XM56_13895 XM56_13895 3098503 3098721 - hypothetical protein gene gene2779 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13895 XM56_13900 XM56_13900 XM56_13900 3098723 3098893 - HAD family hydrolase gene gene2780 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13900 XM56_13905 XM56_13905 XM56_13905 3099029 3099220 + repressor gene gene2781 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13905 XM56_13910 XM56_13910 XM56_13910 3099395 3099916 - capsid protein gene gene2782 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13910 XM56_13915 XM56_13915 XM56_13915 3099925 3100923 - oxidoreductase gene gene2783 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13915 XM56_13920 XM56_13920 XM56_13920 3100964 3101818 - hypothetical protein gene gene2784 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13920 XM56_13925 XM56_13925 XM56_13925 3101812 3102006 - DNA-binding protein gene gene2785 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13925 XM56_13930 XM56_13930 XM56_13930 3102785 3102913 + integrase gene gene2786 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13930 XM56_13935 XM56_13935 XM56_13935 3103482 3103820 + hypothetical protein gene gene2787 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13935 XM56_13940 XM56_13940 XM56_13940 3104085 3104711 + PadR family transcriptional regulator gene gene2788 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13940 XM56_13945 XM56_13945 XM56_13945 3104711 3105022 + hypothetical protein gene gene2789 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13945 XM56_13950 XM56_13950 XM56_13950 3105115 3106545 - 6-phospho-beta-glucosidase gene gene2790 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13950 XM56_13955 XM56_13955 XM56_13955 3106561 3108018 - PTS system cellobiose/arbutin/salicin-specific transporter subunits IIBC phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel gene gene2791 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13955 XM56_13960 XM56_13960 XM56_13960 3108362 3109393 + transcriptional regulator gene gene2792 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13960 XM56_13965 XM56_13965 XM56_13965 3109460 3110038 - hypothetical protein gene gene2793 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13965 XM56_13970 XM56_13970 XM56_13970 3110064 3110618 - cytochrome B561 gene gene2794 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13970 XM56_13975 XM56_13975 XM56_13975 3110935 3111426 + hypothetical protein gene gene2795 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13975 XM56_13980 XM56_13980 XM56_13980 3111393 3111575 + hypothetical protein gene gene2796 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13980 XM56_13985 XM56_13985 XM56_13985 3111617 3112252 - ABC transporter gene gene2797 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13985 XM56_13990 XM56_13990 XM56_13990 3112249 3113190 - ABC transporter permease gene gene2798 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13990 XM56_13995 XM56_13995 XM56_13995 3113191 3113997 - iron ABC transporter ATP-binding protein gene gene2799 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_13995 XM56_14000 XM56_14000 XM56_14000 3113991 3115136 - ABC transporter permease gene gene2800 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14000 XM56_14005 XM56_14005 XM56_14005 3115448 3116971 - major facilitator transporter gene gene2801 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14005 XM56_14010 XM56_14010 XM56_14010 3117093 3117710 + TetR family transcriptional regulator gene gene2802 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14010 XM56_14015 XM56_14015 amidohydrolase amidohydrolase 3117870 3119057 + disrupted pseudogene gene2803 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14015 XM56_14020 XM56_14020 XM56_14020 3119323 3120342 - transposase gene gene2804 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14020 XM56_14025 XM56_14025 XM56_14025 3120467 3120976 + hypothetical protein gene gene2805 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14025 XM56_14030 XM56_14030 XM56_14030 3121292 3122635 + Putrescine importer PuuP gene gene2806 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14030 XM56_14035 XM56_14035 XM56_14035 3122856 3123932 - murein hydrolase effector LrgB membrane-bound lytic murein transglycosylase B%3B catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine in peptidoglycan gene gene2807 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14035 XM56_14040 XM56_14040 XM56_14040 3124244 3125260 + iron ABC transporter substrate-binding protein gene gene2808 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14040 XM56_14045 XM56_14045 XM56_14045 3125347 3126933 + iron ABC transporter permease gene gene2809 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14045 XM56_14050 XM56_14050 XM56_14050 3126930 3127979 + amino acid ABC transporter substrate-binding protein gene gene2810 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14050 XM56_14055 XM56_14055 XM56_14055 3128088 3128726 + membrane protein gene gene2811 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14055 XM56_14060 XM56_14060 XM56_14060 3128752 3129282 - membrane protein gene gene2812 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14060 XM56_14065 XM56_14065 XM56_14065 3130257 3130688 + antitoxin HicB gene gene2813 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14065 XM56_14070 XM56_14070 XM56_14070 3131104 3131628 - cytochrome B gene gene2814 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14070 XM56_14075 XM56_14075 XM56_14075 3131797 3133032 - glutamate-pyruvate aminotransferase gene gene2815 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14075 XM56_14080 XM56_14080 XM56_14080 3133164 3133679 - GCN5 family acetyltransferase gene gene2816 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14080 XM56_14085 XM56_14085 XM56_14085 3133938 3135185 + hypothetical protein gene gene2817 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14085 XM56_14090 XM56_14090 XM56_14090 3135356 3137056 + membrane protein gene gene2818 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14090 XM56_14095 XM56_14095 XM56_14095 3137060 3137800 + LytTR family transcriptional regulator gene gene2819 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14095 XM56_14100 XM56_14100 XM56_14100 3138024 3139268 + membrane protein gene gene2820 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14100 XM56_14105 XM56_14105 XM56_14105 3139466 3140485 + transposase gene gene2821 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14105 XM56_14110 XM56_14110 glk glk 3140902 3141873 - glucokinase catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate gene gene2822 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14110 XM56_14115 XM56_14115 XM56_14115 3142059 3142535 - Na(+)-translocating NADH-quinone reductase subunit E gene gene2823 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14115 XM56_14120 XM56_14120 XM56_14120 3142637 3143524 + transcriptional regulator gene gene2824 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14120 XM56_14125 XM56_14125 XM56_14125 3143496 3145157 - indolepyruvate decarboxylase thiamindiphosphate-dependent%3B catalyzes the formation of indoleacetaldehyde from indolepyruvate gene gene2825 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14125 XM56_14130 XM56_14130 XM56_14130 3145381 3146391 + L-glyceraldehyde 3-phosphate reductase gene gene2826 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14130 XM56_14135 XM56_14135 XM56_14135 3146528 3146956 + hypothetical protein gene gene2827 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14135 XM56_14140 XM56_14140 XM56_14140 3147007 3148236 - manganese transport protein MntH gene gene2828 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14140 XM56_14145 XM56_14145 XM56_14145 3148635 3149819 + nucleoside permease gene gene2829 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14145 XM56_14150 XM56_14150 XM56_14150 3150162 3150237 - tRNA-Lys tRNA gene2830 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14150 XM56_14155 XM56_14155 XM56_14155 3150264 3150339 - tRNA-Val tRNA gene2831 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14155 XM56_14160 XM56_14160 gltX gltX 3150601 3152016 + glutamyl-tRNA ligase catalyzes a two-step reaction%2C first charging an glutamate molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B contains discriminating and non-discriminating subtypes gene gene2832 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14160 XM56_14165 XM56_14165 XM56_14165 3152019 3152147 - Fur family transcriptional regulator gene gene2833 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14165 XM56_14170 XM56_14170 XM56_14170 3152187 3152262 + tRNA-Ala tRNA gene2834 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14170 XM56_14175 XM56_14175 XM56_14175 3152342 3152417 + tRNA-Ala tRNA gene2835 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14175 XM56_14180 XM56_14180 XM56_14180 3152526 3153086 + nitrate reductase gene gene2836 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14180 XM56_14185 XM56_14185 XM56_14185 3153243 3153584 + flxA gene gene2837 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14185 XM56_14190 XM56_14190 XM56_14190 3153660 3153875 - cytoplasmic protein gene gene2838 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14190 XM56_14195 XM56_14195 ligA ligA 3153890 3155908 - NAD-dependent DNA ligase LigA this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction%3B essential for DNA replication and repair of damaged DNA%3B similar to ligase LigB gene gene2839 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14195 XM56_14200 XM56_14200 XM56_14200 3155984 3156967 - cell division protein ZipA gene gene2840 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14200 XM56_14205 XM56_14205 XM56_14205 3157187 3157954 + sulfate transporter gene gene2841 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14205 XM56_14210 XM56_14210 XM56_14210 3158144 3159112 + cysteine synthase gene gene2842 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14210 XM56_14215 XM56_14215 XM56_14215 3159564 3159821 + PTS sugar transporter gene gene2843 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14215 XM56_14220 XM56_14220 XM56_14220 3159869 3161596 + phosphoenolpyruvate-protein phosphotransferase Phosphotransferase system%2C enzyme I%3B transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein%3B part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS)%2C a major carbohydrate active-transport system gene gene2844 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14220 XM56_14225 XM56_14225 XM56_14225 3161645 3162154 + PTS system glucose-specific transporter subunit IIA phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel gene gene2845 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14225 XM56_14230 XM56_14230 XM56_14230 3162206 3163573 - histidine kinase gene gene2846 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14230 XM56_14235 XM56_14235 XM56_14235 3163599 3164282 - CpxR gene gene2847 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14235 XM56_14240 XM56_14240 XM56_14240 3164471 3165679 + hemolysin secretion protein D gene gene2848 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14240 XM56_14245 XM56_14245 XM56_14245 3165683 3167665 + macrolide transporter with MacA is involved in the export of macrolide gene gene2849 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14245 XM56_14250 XM56_14250 cysM cysM 3167732 3168613 - cysteine synthase catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide gene gene2850 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14250 XM56_14255 XM56_14255 XM56_14255 3168833 3169924 - sulfate/thiosulfate transporter subunit gene gene2851 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14255 XM56_14260 XM56_14260 cysW cysW 3169914 3170789 - sulfate/thiosulfate transporter permease subunit Part of the ABC transporter complex cysAWTP involved in sulfate/thiosulfate import gene gene2852 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14260 XM56_14265 XM56_14265 XM56_14265 3170789 3171625 - sulfate/thiosulfate transporter subunit gene gene2853 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14265 XM56_14270 XM56_14270 XM56_14270 3171625 3172653 - thiosulfate transporter subunit gene gene2854 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14270 XM56_14275 XM56_14275 XM56_14275 3173171 3174679 - sialic acid transporter gene gene2855 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14275 XM56_14280 XM56_14280 XM56_14280 3175034 3175912 - N-acetylmannosamine kinase gene gene2856 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14280 XM56_14285 XM56_14285 XM56_14285 3176107 3176571 - sugar isomerase gene gene2857 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14285 XM56_14290 XM56_14290 XM56_14290 3176605 3177513 - N-acetylmannosamine kinase catalyzes the phosphorylation of the N-acetylmannosamine (ManNAc) liberated from N-acetyl-neuraminic acid by the nanA protein gene gene2858 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14290 XM56_14295 XM56_14295 XM56_14295 3177823 3178458 + N-acetylmannosamine-6-phosphate 2-epimerase Converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate gene gene2859 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14295 XM56_14300 XM56_14300 XM56_14300 3178541 3179431 + N-acetylneuraminate lyase gene gene2860 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14300 XM56_14305 XM56_14305 XM56_14305 3179638 3180657 + transposase gene gene2861 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14305 XM56_14310 XM56_14310 XM56_14310 3181078 3181983 - peroxidase gene gene2862 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14310 XM56_14315 XM56_14315 XM56_14315 3182159 3182770 - RpoE-regulated lipoprotein gene gene2863 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14315 XM56_14320 XM56_14320 XM56_14320 3183153 3183566 + hypothetical protein gene gene2864 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14320 XM56_14325 XM56_14325 XM56_14325 3183720 3184145 - acetyltransferase gene gene2865 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14325 XM56_14330 XM56_14330 XM56_14330 3184376 3185317 + coproporphyrinogen III oxidase catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis gene gene2866 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14330 XM56_14335 XM56_14335 XM56_14335 3185317 3185775 + hypothetical protein gene gene2867 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14335 XM56_14340 XM56_14340 XM56_14340 3185887 3186279 + LysR family transcriptional regulator gene gene2868 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14340 XM56_14345 XM56_14345 XM56_14345 3187064 3188083 + transposase gene gene2869 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14345 XM56_14350 XM56_14350 XM56_14350 3188500 3190779 - malic enzyme NADP-dependent%3B catalyzes the oxidative decarboxylation of malate to form pyruvate%3B decarboxylates oxaloacetate gene gene2870 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14350 XM56_14355 XM56_14355 XM56_14355 3191000 3191575 - GDP-mannose pyrophosphatase gene gene2871 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14355 XM56_14360 XM56_14360 XM56_14360 3191757 3192356 - cytochrome C with NapABDFGH functions as a nitrate reductase%3B NapC functions as an electron shuttle between NapAB and NapGH or quinone gene gene2872 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14360 XM56_14365 XM56_14365 napB napB 3192384 3192851 - nitrate reductase small subunit of periplasmic nitrate reductase%3B receives electrons from the membrane-bound NapC and passes them to NapA gene gene2873 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14365 XM56_14370 XM56_14370 XM56_14370 3192922 3195417 - nitrate reductase periplasmic%3B catalytic subunit%3B with NapBC catalyzes the reduction of nitrate to nitrite%3B NapAB receives electrons from NapC gene gene2874 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14370 XM56_14375 XM56_14375 XM56_14375 3195414 3195680 - nitrate reductase gene gene2875 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14375 XM56_14380 XM56_14380 XM56_14380 3195670 3196173 - ferredoxin gene gene2876 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14380 XM56_14385 XM56_14385 XM56_14385 3196678 3197307 + transcriptional regulator NarP nitrate/nitrite response regulator NarP%3B NarP is phosphorylated by NarX and NarQ and can activate fdnG and nitrite or nitrate reductase systems%3B represses expression of other anaerobic genes gene gene2877 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14385 XM56_14390 XM56_14390 XM56_14390 3197346 3197624 - hypothetical protein gene gene2878 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14390 XM56_14395 XM56_14395 XM56_14395 3197834 3200965 + multidrug transporter gene gene2879 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14395 XM56_14400 XM56_14400 XM56_14400 3201403 3202617 + hypothetical protein gene gene2880 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14400 XM56_14405 XM56_14405 XM56_14405 3203077 3203550 + hypothetical protein gene gene2881 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14405 XM56_14410 XM56_14410 XM56_14410 3203713 3204135 + reductase gene gene2882 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14410 XM56_14415 XM56_14415 XM56_14415 3204137 3205264 + succinyl-diaminopimelate desuccinylase gene gene2883 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14415 XM56_14420 XM56_14420 XM56_14420 3205261 3205965 + peptidase M15 gene gene2884 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14420 XM56_14425 XM56_14425 XM56_14425 3206000 3206191 + hypothetical protein gene gene2885 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14425 XM56_14430 XM56_14430 transposase transposase 3206304 3207527 - disrupted pseudogene gene2886 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14430 XM56_14435 XM56_14435 XM56_14435 3207645 3208181 - attachment protein gene gene2887 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14435 XM56_14440 XM56_14440 DNA-binding protein DNA-binding protein 3208494 3208829 - disrupted pseudogene gene2888 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14440 XM56_14445 XM56_14445 DNA-binding protein DNA-binding protein 3208834 3209056 - disrupted pseudogene gene2889 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14445 XM56_14450 XM56_14450 XM56_14450 3209473 3210477 - transposase gene gene2890 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14450 XM56_14455 XM56_14455 XM56_14455 3210879 3211328 - endopeptidase gene gene2891 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14455 XM56_14460 XM56_14460 XM56_14460 3211330 3211479 - membrane protein gene gene2892 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14460 XM56_14465 XM56_14465 XM56_14465 3211581 3212216 - hydrolase gene gene2893 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14465 XM56_14470 XM56_14470 pathogenicity island 1 protein SopD2 pathogenicity island 1 protein SopD2 3212504 3212912 + disrupted pseudogene gene2894 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14470 XM56_14475 XM56_14475 XM56_14475 3213023 3213235 + hypothetical protein gene gene2895 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14475 XM56_14480 XM56_14480 XM56_14480 3213359 3215365 - methionine tRNA cytidine acetyltransferase cetylates the wobble base C34 of the elongation-specific methionine tRNA gene gene2896 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14480 XM56_14485 XM56_14485 XM56_14485 3215367 3215819 - membrane protein gene gene2897 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14485 XM56_14490 XM56_14490 XM56_14490 3215957 3216826 - hypothetical protein gene gene2898 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14490 XM56_14495 XM56_14495 XM56_14495 3217012 3217725 - phosphoribosylaminoimidazole-succinocarboxamide synthase catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis%3B SAICAR synthase gene gene2899 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14495 XM56_14500 XM56_14500 XM56_14500 3217938 3218996 - outer membrane protein assembly factor BamC gene gene2900 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14500 XM56_14505 XM56_14505 XM56_14505 3219013 3219894 - dihydrodipicolinate synthase gene gene2901 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14505 XM56_14510 XM56_14510 gcvR gcvR 3220059 3220628 + glycine cleavage system transcriptional repressor negative transcriptional regulator of the gcvTHP operon gene gene2902 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14510 XM56_14515 XM56_14515 bcp bcp 3220631 3221101 + thiol peroxidase bacterioferritin comigratory protein%3B thiol peroxidase%3B thioredoxin-dependent%3B hydroperoxide peroxidase%3B in Escherichia coli this enzyme preferentially reduces linoleic acid hydroperoxide%3B contains an active site cysteine gene gene2903 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14515 XM56_14520 XM56_14520 XM56_14520 3221465 3222529 - permase gene gene2904 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14520 XM56_14525 XM56_14525 XM56_14525 3222882 3224408 + hypothetical protein gene gene2905 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14525 XM56_14530 XM56_14530 XM56_14530 3224420 3224773 + arsenate reductase gene gene2906 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14530 XM56_14535 XM56_14535 XM56_14535 3224821 3225528 - DNA replication initiation factor controls initiation of DNA replication by inhibiting re-initiation of replication%2C promotes hydrolysis of DnaA-bound ATP gene gene2907 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14535 XM56_14540 XM56_14540 XM56_14540 3225654 3226943 - uracil transporter gene gene2908 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14540 XM56_14545 XM56_14545 upp upp 3227024 3227650 - uracil phosphoribosyltransferase Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate gene gene2909 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14545 XM56_14550 XM56_14550 XM56_14550 3227884 3228927 + phosphoribosylaminoimidazole synthetase catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis gene gene2910 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14550 XM56_14555 XM56_14555 purN purN 3228968 3229606 + phosphoribosylglycinamide formyltransferase glycinamide ribonucleotide transformylase%3B GAR Tfase%3B catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate%3B PurN requires formyl folate for the reaction unlike PurT which uses formate gene gene2911 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14555 XM56_14560 XM56_14560 XM56_14560 3229742 3230287 + spermidine acetyltransferase catalyzes the formation of N(1)- and N(8)-acetylspermidine from spermidine gene gene2912 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14560 XM56_14565 XM56_14565 XM56_14565 3230747 3231499 - hypothetical protein gene gene2913 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14565 XM56_14570 XM56_14570 pstB pstB 3232086 3232898 - phosphate ABC transporter ATP-binding protein ATP-binding protein%3B PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation gene gene2914 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14570 XM56_14575 XM56_14575 XM56_14575 3232927 3234591 - phosphate ABC transporter permease gene gene2915 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14575 XM56_14580 XM56_14580 XM56_14580 3234591 3236777 - phosphate ABC transporter permease gene gene2916 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14580 XM56_14585 XM56_14585 XM56_14585 3237023 3239092 + polyphosphate kinase gene gene2917 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14585 XM56_14590 XM56_14590 XM56_14590 3239079 3240659 + exopolyphosphatase gene gene2918 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14590 XM56_14595 XM56_14595 XM56_14595 3240722 3240913 + hypothetical protein gene gene2919 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14595 XM56_14600 XM56_14600 XM56_14600 3240961 3242436 + dihydroorotate dehydrogenase gene gene2920 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14600 XM56_14605 XM56_14605 XM56_14605 3242608 3245958 + diguanylate cyclase gene gene2921 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14605 XM56_14610 XM56_14610 XM56_14610 3246052 3247404 + chaperone gene gene2922 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14610 XM56_14615 XM56_14615 XM56_14615 3248416 3249750 + multidrug transporter gene gene2923 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14615 XM56_14620 XM56_14620 XM56_14620 3249750 3252893 + multidrug transporter Part of a tripartite efflux system composed of MdtA%2C MdtB and MdtC which confers resistance against novobiocin and deoxycholate gene gene2924 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14620 XM56_14625 XM56_14625 XM56_14625 3252890 3255964 + multidrug transporter Part of a tripartite efflux system composed of MdtA%2C MdtB and MdtC which confers resistance against novobiocin and deoxycholate gene gene2925 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14625 XM56_14630 XM56_14630 XM56_14630 3256090 3257499 + transporter gene gene2926 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14630 XM56_14635 XM56_14635 XM56_14635 3257516 3258892 + histidine kinase gene gene2927 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14635 XM56_14640 XM56_14640 XM56_14640 3258901 3259620 + transcriptional regulator response regulator in two-component regulatory system with BaeS%3B regulator of RNA synthesis%2C flagellar biosynthesis%2C chemotaxis and transport gene gene2928 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14640 XM56_14645 XM56_14645 XM56_14645 3259699 3260037 + hypothetical protein gene gene2929 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14645 XM56_14650 XM56_14650 XM56_14650 3260261 3261664 + protease gene gene2930 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14650 XM56_14655 XM56_14655 XM56_14655 3262138 3263037 + lipid kinase cytosolic protein with phosphatidylglycerol kinase activity%3B undetermined physiological role gene gene2931 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14655 XM56_14660 XM56_14660 srlA srlA 3263416 3263964 + PTS system glucitol/sorbitol-specific transporter subunit IIC catalyzes the phosphorylation of incoming sugar substrates along with their translocation across the cell membrane%3B the IIC domain forms the PTS system translocation channel and contains the specific substrate-binding site gene gene2932 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14660 XM56_14665 XM56_14665 srlE srlE 3264000 3265025 + PTS system glucitol/sorbitol-specific transporter subunit IIB catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B subunit IIB transfers the phosphoryl group to the substrate gene gene2933 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14665 XM56_14670 XM56_14670 XM56_14670 3265091 3265453 + PTS system glucitol/sorbitol-specific transporter subunit IIA phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel gene gene2934 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14670 XM56_14675 XM56_14675 XM56_14675 3265600 3266379 + sorbitol-6-phosphate 2-dehydrogenase catalyzes the conversion of sorbitol 6-phosphate into fructose 6-phosphate gene gene2935 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14675 XM56_14680 XM56_14680 XM56_14680 3266736 3267101 + XRE family transcriptional regulator gene gene2936 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14680 XM56_14685 XM56_14685 srlR srlR 3267186 3267956 + transcriptional regulator regulates genes involved in glucitol utilization gene gene2937 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14685 XM56_14690 XM56_14690 XM56_14690 3267949 3268914 + arabinose 5-phosphate isomerase gene gene2938 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14690 XM56_14695 XM56_14695 XM56_14695 3268994 3269539 - hypothetical protein gene gene2939 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14695 XM56_14700 XM56_14700 XM56_14700 3269807 3270670 + hypothetical protein gene gene2940 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14700 XM56_14705 XM56_14705 XM56_14705 3270852 3271652 - hydroxymethylpyrimidine kinase catalyzes the formation hydroxymethylpyrimidine phosphate from hydroxymethylpyrimidine and the formation of of 4-amino-2-methyl-5-diphosphomethylpyrimidine from hydroxymethylpyrimidine phosphate gene gene2941 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14705 XM56_14710 XM56_14710 XM56_14710 3272047 3272613 + hypothetical protein gene gene2942 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14710 XM56_14715 XM56_14715 XM56_14715 3272934 3273953 + transposase gene gene2943 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14715 XM56_14720 XM56_14720 XM56_14720 3274346 3275614 - gluconate 2-dehydrogenase gene gene2944 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14720 XM56_14725 XM56_14725 XM56_14725 3275616 3277235 - choline dehydrogenase gene gene2945 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14725 XM56_14730 XM56_14730 XM56_14730 3277253 3277762 - 2-keto-D-gluconate dehydrogenase gene gene2946 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14730 XM56_14735 XM56_14735 XM56_14735 3278059 3279927 - hypothetical protein gene gene2947 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14735 XM56_14740 XM56_14740 guaA guaA 3280177 3281754 - GMP synthase contains glutamine-hydrolyzing domain and glutamine amidotransferase%3B GMP-binding domain%3B functions to produce GMP from XMP in the IMP pathway gene gene2948 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14740 XM56_14745 XM56_14745 XM56_14745 3281941 3283404 - inosine-5-monophosphate dehydrogenase gene gene2949 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14745 XM56_14750 XM56_14750 xseA xseA 3283573 3284949 + exodeoxyribonuclease VII large subunit bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides gene gene2950 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14750 XM56_14755 XM56_14755 XM56_14755 3284993 3285217 - primosomal protein N' (replication factor Y) - superfamily II helicase gene gene2951 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14755 XM56_14760 XM56_14760 XM56_14760 3285246 3286202 - transporter gene gene2952 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14760 XM56_14765 XM56_14765 XM56_14765 3286666 3287685 - transposase gene gene2953 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14765 XM56_14770 XM56_14770 XM56_14770 3287864 3289348 - GTP-binding protein Der gene gene2954 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14770 XM56_14775 XM56_14775 XM56_14775 3289351 3289551 + hypothetical protein gene gene2955 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14775 XM56_14780 XM56_14780 XM56_14780 3289548 3290729 - membrane biogenesis protein gene gene2956 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14780 XM56_14785 XM56_14785 XM56_14785 3290741 3291361 - membrane protein gene gene2957 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14785 XM56_14790 XM56_14790 hisS hisS 3291375 3292649 - histidine--tRNA ligase catalyzes a two-step reaction%2C first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B class II aminoacyl-tRNA synthetase%3B forms homodimers%3B some organisms have a paralogous gene%2C hisZ%2C that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG gene gene2958 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14790 XM56_14795 XM56_14795 XM56_14795 3292866 3293990 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gene gene2959 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14795 XM56_14800 XM56_14800 XM56_14800 3294111 3295127 - cytoskeletal protein RodZ gene gene2960 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14800 XM56_14805 XM56_14805 XM56_14805 3295117 3295866 - pilus assembly protein PilW gene gene2961 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14805 XM56_14810 XM56_14810 XM56_14810 3296061 3297254 - ribosomal RNA large subunit methyltransferase N 23S rRNA m2A2503 methyltransferase%3B methylates the C2 position of the A2530 nucleotide in 23S rRNA%3B may be involved in antibiotic resistance gene gene2962 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14810 XM56_14815 XM56_14815 XM56_14815 3297494 3297922 - nucleoside diphosphate kinase catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate gene gene2963 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14815 XM56_14820 XM56_14820 XM56_14820 3298285 3300753 - exotoxin gene gene2964 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14820 XM56_14825 XM56_14825 XM56_14825 3300925 3303261 - penicillin-binding protein 1C penicillin-insensitive transglycosylase/transpeptidase gene gene2965 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14825 XM56_14830 XM56_14830 XM56_14830 3303313 3308349 - hypothetical protein gene gene2966 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14830 XM56_14835 XM56_14835 XM56_14835 3309291 3313088 + type V secretion protein A gene gene2967 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14835 XM56_14840 XM56_14840 XM56_14840 3313168 3314055 - endopeptidase IV gene gene2968 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14840 XM56_14845 XM56_14845 XM56_14845 3314212 3315507 - aminopeptidase B catalyzes the removal of an N-terminal amino acid from a peptide or arylamide gene gene2969 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14845 XM56_14850 XM56_14850 XM56_14850 3315661 3315861 - hypothetical protein gene gene2970 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14850 XM56_14855 XM56_14855 XM56_14855 3315882 3316217 - 2Fe-2S ferredoxin gene gene2971 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14855 XM56_14860 XM56_14860 hscA hscA 3316220 3318070 - chaperone protein HscA involved in the maturation of iron-sulfur cluster-containing proteins gene gene2972 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14860 XM56_14865 XM56_14865 hscB hscB 3318253 3318780 - co-chaperone HscB J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone%3B may function in biogenesis of iron-sulfur proteins gene gene2973 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14865 XM56_14870 XM56_14870 iscA iscA 3318888 3319211 - iron-sulfur cluster assembly protein forms iron-sulfur clusters of ferredoxin [2FE-2S]%3B binds iron in the presence of the thioredoxin reductase system%3B forms homodimers and tetramers%3B similar to SufA protein gene gene2974 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14870 XM56_14875 XM56_14875 XM56_14875 3319315 3319701 - scaffolding protein gene gene2975 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14875 XM56_14880 XM56_14880 XM56_14880 3319732 3320946 - cysteine desulfurase catalyzes the removal of elemental sulfur from cysteine to produce alanine%3B involved in NAD biosynthesis gene gene2976 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14880 XM56_14885 XM56_14885 XM56_14885 3321015 3321509 - transcriptional regulator gene gene2977 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14885 XM56_14890 XM56_14890 XM56_14890 3321666 3322439 - tRNA (cytidine/uridine-2'-O-)-methyltransferase catalyzes the fromation of 2'O-methylated cytidine or 2'O-methylated uridine at position 32 in tRNA gene gene2978 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14890 XM56_14895 XM56_14895 XM56_14895 3322683 3323489 + inositol monophosphatase gene gene2979 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14895 XM56_14900 XM56_14900 XM56_14900 3323697 3324713 - nickel transporter gene gene2980 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14900 XM56_14905 XM56_14905 XM56_14905 3324704 3325378 - membrane protein gene gene2981 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14905 XM56_14910 XM56_14910 XM56_14910 3325522 3326805 + stationary phase inducible protein CsiE gene gene2982 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14910 XM56_14915 XM56_14915 XM56_14915 3326802 3327959 - 3-phenylpropionic acid transporter transporter of 3-phenylpropionate across the inner membrane%3B member of the major facilitator superfamily of transporters gene gene2983 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14915 XM56_14920 XM56_14920 XM56_14920 3328126 3329379 - serine hydroxymethyltransferase gene gene2984 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14920 XM56_14925 XM56_14925 XM56_14925 3329767 3330957 + dihydropteridine reductase flavohemoprotein%3B catalyzes the formation of nitrate from nitric oxide%3B can also catalyze the reduction of dihydropteridine gene gene2985 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14925 XM56_14930 XM56_14930 XM56_14930 3331221 3332120 + hypothetical protein gene gene2986 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14930 XM56_14935 XM56_14935 XM56_14935 3332168 3332548 + hypothetical protein gene gene2987 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14935 XM56_14940 XM56_14940 XM56_14940 3332666 3333835 + hypothetical protein gene gene2988 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14940 XM56_14945 XM56_14945 XM56_14945 3333927 3334814 + hydrolase phosphotriesterase homology protein%3B PhP%3B YhfV%3B member of a family of proteins related to phosphotriesterase (PTE) gene gene2989 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14945 XM56_14950 XM56_14950 XM56_14950 3334817 3335170 + membrane protein gene gene2990 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14950 XM56_14955 XM56_14955 XM56_14955 3335222 3336475 + membrane protein gene gene2991 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14955 XM56_14960 XM56_14960 XM56_14960 3336676 3337014 - nitrogen regulatory protein P-II 1 indirectly regulates nitrogen metabolism%3B at high nitrogen levels P-II prevents the phosphorylation of NR-I%2C the transcriptional activator of the glutamine synthetase gene (glnA)%3B at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA gene gene2992 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14960 XM56_14965 XM56_14965 XM56_14965 3337029 3338651 - NAD synthetase NH(3)-dependent%3B catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP%3B ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one%3B forms homodimers gene gene2993 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14965 XM56_14970 XM56_14970 XM56_14970 3338696 3340033 - response regulator GlrR with GlrK is part of a two-component signal transduction system regulating glmY gene gene2994 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14970 XM56_14975 XM56_14975 XM56_14975 3339996 3341048 - membrane protein gene gene2995 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14975 XM56_14980 XM56_14980 XM56_14980 3341052 3342488 - histidine kinase part of the GlrKR two-component signal transduction system involved in the regulation of glmY gene gene2996 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14980 XM56_14985 XM56_14985 XM56_14985 3343610 3344056 + hypothetical protein gene gene2997 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14985 XM56_14990 XM56_14990 XM56_14990 3344280 3348170 - phosphoribosylformylglycinamidine synthase catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis gene gene2998 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14990 XM56_14995 XM56_14995 XM56_14995 3348485 3349945 + murein transglycosylase gene gene2999 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_14995 XM56_15000 XM56_15000 XM56_15000 3350109 3350699 - tRNA adenosine deaminase gene gene3000 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15000 XM56_15005 XM56_15005 XM56_15005 3350833 3351882 + membrane protein gene gene3001 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15005 XM56_15010 XM56_15010 XM56_15010 3351959 3352642 - hypothetical protein gene gene3002 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15010 XM56_15015 XM56_15015 murQ murQ 3352750 3353637 - N-acetylmuramic acid-6-phosphate etherase catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate%3B involved in MurNAc dissimilation pathway gene gene3003 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15015 XM56_15020 XM56_15020 XM56_15020 3353993 3354835 + transcriptional regulator gene gene3004 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15020 XM56_15025 XM56_15025 XM56_15025 3354897 3355157 + ferredoxin gene gene3005 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15025 XM56_15030 XM56_15030 XM56_15030 3355223 3356566 - gluconate permease gene gene3006 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15030 XM56_15035 XM56_15035 acpS acpS 3357190 3357570 - 4'-phosphopantetheinyl transferase Catalyzes the formation of holo-ACP%2C which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids gene gene3007 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15035 XM56_15040 XM56_15040 XM56_15040 3357570 3358301 - pyridoxine 5'-phosphate synthase involved in the de novo synthesis of pyridoxine (Vitamin B6) gene gene3008 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15040 XM56_15045 XM56_15045 recO recO 3358470 3359195 - DNA repair protein RecO involved in DNA repair and RecFOR pathway recombination%3B RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA gene gene3009 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15045 XM56_15050 XM56_15050 XM56_15050 3359205 3360116 - hypothetical protein gene gene3010 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15050 XM56_15055 XM56_15055 rnc rnc 3360113 3360793 - ribonuclease III cytoplasmic enzyme involved in processing rRNA and some mRNAs%3B substrates typically have dsRNA regions%3B forms a homodimer%3B have N-terminal nuclease and C-terminal RNA-binding domains%3B requires magnesium as preferred ion for activity gene gene3011 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15055 XM56_15060 XM56_15060 XM56_15060 3361039 3362037 - signal peptidase I catalyzes the cleavage of the amino-terminal leader peptide from secretory proteins gene gene3012 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15060 XM56_15065 XM56_15065 XM56_15065 3362047 3363846 - elongation factor 4 gene gene3013 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15065 XM56_15070 XM56_15070 XM56_15070 3364218 3365054 + membrane protein gene gene3014 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15070 XM56_15075 XM56_15075 XM56_15075 3365069 3365530 - SoxR reducing system protein RseC gene gene3015 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15075 XM56_15080 XM56_15080 rseB rseB 3365527 3366483 - anti-sigma E factor periplasmic protein%3B interacts with the C-terminal domain of RseA and stimulates RseA binding to sigmaE via the cytoplasmic RseA N-terminal domain which then sequesters sigmaE in the membrane thereby preventing sigmaE associated with core RNAP gene gene3016 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15080 XM56_15085 XM56_15085 XM56_15085 3366483 3367139 - anti-RNA polymerase sigma factor SigE gene gene3017 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15085 XM56_15090 XM56_15090 XM56_15090 3367164 3367739 - RNA polymerase sigma factor RpoE Member of the extracytoplasmic function sigma factors which are active under specific conditions%3B binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription%3B this sigma factor is involved in heat shock and oxidative stress response gene gene3018 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15090 XM56_15095 XM56_15095 XM56_15095 3367928 3369565 + L-aspartate oxidase catalyzes the formation of oxaloacetate from L-aspartate gene gene3019 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15095 XM56_15100 XM56_15100 XM56_15100 3369677 3370423 - tRNA (adenine-N6)-methyltransferase gene gene3020 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15100 XM56_15105 XM56_15105 XM56_15105 3370556 3371881 + ATP-dependent RNA helicase SrmB facilitates an early step in the assembly of the 50S subunit of the ribosome gene gene3021 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15105 XM56_15110 XM56_15110 XM56_15110 3372002 3372841 + transposase gene gene3022 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15110 XM56_15115 XM56_15115 XM56_15115 3372962 3373981 + transposase gene gene3023 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15115 XM56_15120 XM56_15120 XM56_15120 3374912 3375568 - phospholipase A gene gene3024 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15120 XM56_15125 XM56_15125 phospholipase A phospholipase A 3375657 3376452 - disrupted pseudogene gene3025 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15125 XM56_15130 XM56_15130 XM56_15130 3376488 3376628 - phospholipase A gene gene3026 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15130 XM56_15135 XM56_15135 XM56_15135 3376849 3377232 - autonomous glycyl radical cofactor GrcA stress-induced glycyl radical protein that can replace an oxidatively damaged pyruvate formate-lyase subunit gene gene3027 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15135 XM56_15140 XM56_15140 XM56_15140 3377584 3378270 + uracil-DNA glycosylase Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine gene gene3028 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15140 XM56_15145 XM56_15145 XM56_15145 3378339 3378917 - heat shock protein GrpE with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins%3B may act as a thermosensor gene gene3029 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15145 XM56_15150 XM56_15150 ppnK ppnK 3379041 3379922 + inorganic polyphosphate kinase catalyzes the phosphorylation of NAD to NADP gene gene3030 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15150 XM56_15155 XM56_15155 XM56_15155 3380009 3381670 + recombination and repair protein gene gene3031 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15155 XM56_15160 XM56_15160 XM56_15160 3381784 3382125 + membrane biogenesis protein gene gene3032 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15160 XM56_15165 XM56_15165 XM56_15165 3382277 3382561 - hypothetical protein gene gene3033 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15165 XM56_15170 XM56_15170 XM56_15170 3382554 3382988 - cyclase gene gene3034 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15170 XM56_15175 XM56_15175 smpB smpB 3383149 3383631 + SsrA-binding protein binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes%3B also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site%3B SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus%3B both the tmRNA and SmpB are regulated in cell cycle-dependent manner%3B functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation gene gene3035 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15175 XM56_15180 XM56_15180 XM56_15180 3384226 3385455 + integrase gene gene3036 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15180 XM56_15185 XM56_15185 XM56_15185 3385773 3386780 - hypothetical protein gene gene3037 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15185 XM56_15190 XM56_15190 XM56_15190 3386802 3387437 - hypothetical protein gene gene3038 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15190 XM56_15195 XM56_15195 XM56_15195 3387732 3388739 + restriction endonuclease gene gene3039 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15195 XM56_15200 XM56_15200 XM56_15200 3388801 3389898 - DNA methyltransferase gene gene3040 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15200 XM56_15205 XM56_15205 XM56_15205 3390815 3392131 - prepilin cleavage protein gene gene3041 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15205 XM56_15210 XM56_15210 XM56_15210 3392319 3392594 - conjugal transfer protein TraD gene gene3042 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15210 XM56_15215 XM56_15215 XM56_15215 3392604 3392846 - hypothetical protein gene gene3043 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15215 XM56_15220 XM56_15220 XM56_15220 3393550 3394041 + hypothetical protein gene gene3044 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15220 XM56_15225 XM56_15225 XM56_15225 3394078 3394803 - ATPase gene gene3045 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15225 XM56_15230 XM56_15230 XM56_15230 3394790 3396298 - transposase gene gene3046 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15230 XM56_15235 XM56_15235 XM56_15235 3396288 3396737 + hypothetical protein gene gene3047 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15235 XM56_15240 XM56_15240 XM56_15240 3396799 3397560 - hypothetical protein gene gene3048 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15240 XM56_15245 XM56_15245 XM56_15245 3397609 3398439 - transcriptional regulator represses the celABCDF-ydjC operon involved in carbon uptake gene gene3049 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15245 XM56_15250 XM56_15250 XM56_15250 3398491 3398838 - PTS system N%2CN'-diacetylchitobiose-specific transporter subunit IIA catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B involved N%2CN'-diacetylchitobiose transport%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake gene gene3050 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15250 XM56_15255 XM56_15255 XM56_15255 3398867 3400252 - 6-phospho-beta-glucosidase gene gene3051 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15255 XM56_15260 XM56_15260 XM56_15260 3400291 3401652 - PTS system N%2CN'-diacetylchitobiose-specific transporter subunit IIC catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B involved in N%2CN'-diacetylchitobiose transport%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake gene gene3052 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15260 XM56_15265 XM56_15265 XM56_15265 3401663 3401980 - PTS system N%2CN'-diacetylchitobiose-specific transporter subunit IIB catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B involved in N%2CN'-diacetylchitobiose transport%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake gene gene3053 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15265 XM56_15270 XM56_15270 XM56_15270 3402555 3403718 + oxidoreductase gene gene3054 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15270 XM56_15275 XM56_15275 XM56_15275 3403918 3404937 + transposase gene gene3055 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15275 XM56_15280 XM56_15280 L-glyceraldehyde 3-phosphate reductase L-glyceraldehyde 3-phosphate reductase 3405365 3406399 - disrupted pseudogene gene3056 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15280 XM56_15285 XM56_15285 XM56_15285 3406588 3406968 + chromosome condensation protein CrcB gene gene3057 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15285 XM56_15290 XM56_15290 ccrB ccrB 3407038 3407442 + camphor resistance protein CrcB may be involved in chromosome condensation%3B overexpression in Escherichia coli protects against decondensation by camphor%3B overexpressing the protein results in an increase in supercoiling gene gene3058 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15290 XM56_15295 XM56_15295 XM56_15295 3407525 3408700 - voltage-gated potassium channel TrkA gene gene3059 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15295 XM56_15300 XM56_15300 XM56_15300 3409044 3409376 + acid-resistance protein gene gene3060 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15300 XM56_15305 XM56_15305 XM56_15305 3409442 3410500 - nickel transporter gene gene3061 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15305 XM56_15310 XM56_15310 XM56_15310 3410524 3411513 - urea transporter gene gene3062 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15310 XM56_15315 XM56_15315 XM56_15315 3411629 3412612 - urease accessory protein UreD gene gene3063 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15315 XM56_15320 XM56_15320 XM56_15320 3412609 3413274 - urease accessory protein UreG gene gene3064 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15320 XM56_15325 XM56_15325 XM56_15325 3413392 3414078 - urease accessory protein UreF gene gene3065 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15325 XM56_15330 XM56_15330 ureE ureE 3414100 3414780 - urease accessory protein UreE involved in the assembly of the urease metallocenter%3B possible nickel donor gene gene3066 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15330 XM56_15335 XM56_15335 ureC ureC 3414954 3416672 - urease subunit alpha ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide%3B in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa%3B the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits gene gene3067 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15335 XM56_15340 XM56_15340 ureB ureB 3416837 3417331 - urease subunit beta ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide%3B in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa%3B the holoenzyme is composed of 3 UreC (alpha) and 3 UreAB (gamma/beta) gene gene3068 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15340 XM56_15345 XM56_15345 XM56_15345 3417385 3417687 - urease subunit gamma gene gene3069 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15345 XM56_15350 XM56_15350 XM56_15350 3418829 3419494 - nickel ABC transporter ATP-binding protein gene gene3070 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15350 XM56_15355 XM56_15355 XM56_15355 3419487 3420293 - peptide ABC transporter ATP-binding protein gene gene3071 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15355 XM56_15360 XM56_15360 XM56_15360 3420293 3421099 - peptide ABC transporter permease gene gene3072 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15360 XM56_15365 XM56_15365 XM56_15365 3421096 3422079 - peptide ABC transporter permease gene gene3073 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15365 XM56_15370 XM56_15370 XM56_15370 3422064 3423647 - nickel ABC transporter substrate-binding protein gene gene3074 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15370 XM56_15375 XM56_15375 XM56_15375 3424250 3425059 - DNA gyrase gene gene3075 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15375 XM56_15380 XM56_15380 XM56_15380 3425174 3425482 - DNA-directed RNA polymerase subunit beta gene gene3076 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15380 XM56_15385 XM56_15385 XM56_15385 3425717 3426154 - rhodanese gene gene3077 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15385 XM56_15390 XM56_15390 XM56_15390 3426251 3426550 + AraC family transcriptional regulator gene gene3078 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15390 XM56_15395 XM56_15395 XM56_15395 3426621 3426779 + AraC family transcriptional regulator gene gene3079 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15395 XM56_15400 XM56_15400 XM56_15400 3426868 3427080 - cold-shock protein gene gene3080 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15400 XM56_15405 XM56_15405 XM56_15405 3427461 3427799 + MbeD/MobD like protein gene gene3081 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15405 XM56_15410 XM56_15410 XM56_15410 3427890 3428339 + membrane protein gene gene3082 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15410 XM56_15415 XM56_15415 XM56_15415 3428390 3428725 - hypothetical protein gene gene3083 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15415 XM56_15420 XM56_15420 XM56_15420 3428823 3430058 - hypothetical protein gene gene3084 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15420 XM56_15425 XM56_15425 XM56_15425 3430144 3431043 - AraC family transcriptional regulator gene gene3085 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15425 XM56_15430 XM56_15430 XM56_15430 3431026 3431736 + hypothetical protein gene gene3086 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15430 XM56_15435 XM56_15435 XM56_15435 3431930 3432283 - acid-shock protein gene gene3087 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15435 XM56_15440 XM56_15440 XM56_15440 3432497 3432778 + hypothetical protein gene gene3088 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15440 XM56_15445 XM56_15445 XM56_15445 3432868 3433176 + membrane protein gene gene3089 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15445 XM56_15450 XM56_15450 XM56_15450 3433324 3434778 - DNA-binding protein gene gene3090 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15450 XM56_15455 XM56_15455 XM56_15455 3434875 3435306 + alkylhydroperoxidase gene gene3091 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15455 XM56_15460 XM56_15460 XM56_15460 3435589 3435825 + glutaredoxin gene gene3092 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15460 XM56_15465 XM56_15465 nrdI nrdI 3435839 3436243 + ribonucleotide reductase stimulatory protein in Salmonella NrdI has a stimulatory effect on the ribonucleotide reductase activity of NrdH with NrdEF gene gene3093 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15465 XM56_15470 XM56_15470 XM56_15470 3436225 3438375 + ribonucleotide-diphosphate reductase subunit alpha Catalyzes the rate-limiting step in dNTP synthesis gene gene3094 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15470 XM56_15475 XM56_15475 XM56_15475 3438545 3439516 + ribonucleotide-diphosphate reductase subunit beta B2 or R2 protein%3B type 1b enzyme%3B catalyzes the rate-limiting step in dNTP synthesis%3B converts nucleotides to deoxynucleotides%3B forms a homodimer and then a multimeric complex with NrdE gene gene3095 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15475 XM56_15480 XM56_15480 XM56_15480 3440012 3441211 + glycine/betaine ABC transporter ATP-binding protein with ProWX is involved in the high-affinity uptake of glycine betaine gene gene3096 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15480 XM56_15485 XM56_15485 XM56_15485 3441204 3442334 + glycine/betaine ABC transporter permease with ProVX is involved in the high-affinity uptake of glycine betaine gene gene3097 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15485 XM56_15490 XM56_15490 proX proX 3442489 3443493 + glycine/betaine ABC transporter substrate-binding protein with ProVW%2C part of the high-affinity transport system for the osmoprotectant glycine betaine gene gene3098 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15490 XM56_15495 XM56_15495 XM56_15495 3443735 3443811 - tRNA-Asp tRNA gene3099 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15495 XM56_15500 XM56_15500 XM56_15500 3443924 3444706 - DNA polymerase III subunit epsilon 3'-5' exonuclease of DNA polymerase III gene gene3100 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15500 XM56_15505 XM56_15505 XM56_15505 3444777 3445241 + ribonuclease H gene gene3101 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15505 XM56_15510 XM56_15510 XM56_15510 3445257 3445976 - hypothetical protein gene gene3102 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15510 XM56_15515 XM56_15515 XM56_15515 3446023 3446778 + hydroxyacylglutathione hydrolase gene gene3103 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15515 XM56_15520 XM56_15520 mltD mltD 3447000 3448241 + lytic murein transglycosylase catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues%3B may play a role in recycling muropeptides during cell division and/or cell elongation%3B in Helicobacter pylori MltD is a endolytic transglycosylase involved mainly in the rearrangement of the peptidoglycan layer of the bacterial cell wall gene gene3104 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15520 XM56_15525 XM56_15525 XM56_15525 3448896 3449546 + transposase gene gene3105 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15525 XM56_15530 XM56_15530 XM56_15530 3449818 3450579 - hypothetical protein gene gene3106 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15530 XM56_15535 XM56_15535 XM56_15535 3450843 3452024 - MFS sugar transporter gene gene3107 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15535 XM56_15540 XM56_15540 XM56_15540 3452143 3453045 + LysR family transcriptional regulator gene gene3108 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15540 XM56_15545 XM56_15545 dkgB dkgB 3453090 3453893 - 2%2C5-diketo-D-gluconic acid reductase catalyzes the reduction of 2%2C5-diketo-D-gluconic acid to 2-keto-L-gulonic acid gene gene3109 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15545 XM56_15550 XM56_15550 3-oxoacyl-ACP synthase 3-oxoacyl-ACP synthase 3454113 3454991 - disrupted pseudogene gene3110 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15550 XM56_15555 XM56_15555 XM56_15555 3455020 3456222 - transposase gene gene3111 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15555 XM56_15560 XM56_15560 XM56_15560 3456646 3456722 - tRNA-Asp tRNA gene3112 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15560 XM56_15565 XM56_15565 XM56_15565 3456848 3456963 - 5S ribosomal RNA rRNA gene3113 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15565 XM56_15570 XM56_15570 XM56_15570 3457134 3460169 - 23S ribosomal RNA rRNA gene3114 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15570 XM56_15575 XM56_15575 XM56_15575 3460540 3460615 - tRNA-Glu tRNA gene3115 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15575 XM56_15580 XM56_15580 XM56_15580 3460811 3462359 - 16S ribosomal RNA rRNA gene3116 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15580 XM56_15585 XM56_15585 XM56_15585 3462794 3463357 - D%2CD-heptose 1%2C7-bisphosphate phosphatase Converts the D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate gene gene3117 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15585 XM56_15590 XM56_15590 metN metN 3463544 3464575 + DL-methionine transporter ATP-binding subunit part of the metNIQ transport system for methionine gene gene3118 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15590 XM56_15595 XM56_15595 XM56_15595 3464568 3465221 + DL-methionine transporter permease subunit part of the MetNIQ methionine uptake system gene gene3119 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15595 XM56_15600 XM56_15600 metQ metQ 3465416 3466231 + DL-methionine transporter substrate-binding subunit gene gene3120 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15600 XM56_15605 XM56_15605 rcsF rcsF 3466379 3466786 + membrane protein gene gene3121 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15605 XM56_15610 XM56_15610 XM56_15610 3466783 3467490 + tRNA (adenine(37)-N6)-methyltransferase gene gene3122 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15610 XM56_15615 XM56_15615 XM56_15615 3467719 3469437 + proline--tRNA ligase catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro) gene gene3123 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15615 XM56_15620 XM56_15620 XM56_15620 3469511 3470194 - copper homeostasis protein gene gene3124 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15620 XM56_15625 XM56_15625 XM56_15625 3470267 3470683 - peptidyl-tRNA hydrolase gene gene3125 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15625 XM56_15630 XM56_15630 XM56_15630 3470686 3471234 - hypothetical protein gene gene3126 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15630 XM56_15635 XM56_15635 XM56_15635 3471472 3471672 + hypothetical protein gene gene3127 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15635 XM56_15640 XM56_15640 XM56_15640 3471659 3471919 + Rho-binding antiterminator Suppresses temperature-sensitive mutations in essential genes by modulating rho-dependent transcription termination gene gene3128 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15640 XM56_15645 XM56_15645 XM56_15645 3472006 3472320 - cytochrome C554 gene gene3129 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15645 XM56_15650 XM56_15650 tilS tilS 3472342 3473727 - tRNA(Ile)-lysidine ligase Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU%3B ATP-dependent%3B responsible for modifying the wobble-base of the CAU anticodon of tRNAIle such that it exhibits proper recognition of the AUA codon rather than the AUG codon and is in turn properly recognized by isoleucyl-tRNA synthetase gene gene3130 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15650 XM56_15655 XM56_15655 XM56_15655 3473729 3474127 - lyase gene gene3131 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15655 XM56_15660 XM56_15660 XM56_15660 3474141 3476282 - lysine decarboxylase LdcC constitutive%3B catalyzes the formation of cadaverine from lysine gene gene3132 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15660 XM56_15665 XM56_15665 XM56_15665 3476587 3477546 - acetyl-CoA carboxylase subunit alpha catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits%3B one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein gene gene3133 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15665 XM56_15670 XM56_15670 dnaE dnaE 3477559 3481041 - DNA polymerase III subunit alpha catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time%3B main replicative polymerase gene gene3134 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15670 XM56_15675 XM56_15675 rnhB rnhB 3481152 3481748 - ribonuclease HII RNH2%3B RNase HII%3B binds manganese%3B endonuclease which specifically degrades the RNA of RNA-DNA hybrids gene gene3135 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15675 XM56_15680 XM56_15680 lpxB lpxB 3481745 3482929 - lipid-A-disaccharide synthase catalyzes the formation of lipid A disaccharide from UDP-2%2C3-diacylglucosamine and 2%2C3-diacylglucosamine-1-phosphate%2C lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM gene gene3136 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15680 XM56_15685 XM56_15685 XM56_15685 3482933 3483721 - UDP-N-acetylglucosamine acyltransferase catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis gene gene3137 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15685 XM56_15690 XM56_15690 XM56_15690 3483725 3484261 - hydroxymyristoyl-ACP dehydratase gene gene3138 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15690 XM56_15695 XM56_15695 lpxD lpxD 3484424 3485446 - UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis gene gene3139 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15695 XM56_15700 XM56_15700 XM56_15700 3485450 3485947 - molecular chaperone gene gene3140 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15700 XM56_15705 XM56_15705 XM56_15705 3486106 3488490 - outer membrane protein assembly protein YaeT part of a complex with YfgL%2C YfiO%2C and NlpB involved in outer membrane protein biosynthesis%3B involved in the assembly of outer membrane proteins gene gene3141 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15705 XM56_15710 XM56_15710 XM56_15710 3488527 3489882 - zinc metallopeptidase RseP catalyzes the cleavage of RseA which activates the sigmaE-mediated stress response gene gene3142 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15710 XM56_15715 XM56_15715 cdsA cdsA 3489911 3490759 - CDP-diglyceride synthetase catalyzes the synthesis of CDP-diglyceride from CTP and phosphatidate gene gene3143 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15715 XM56_15720 XM56_15720 XM56_15720 3490769 3491527 - UDP pyrophosphate synthase catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate gene gene3144 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15720 XM56_15725 XM56_15725 XM56_15725 3491753 3492949 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase catalyzes the formation of 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose-5-phosphate gene gene3145 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15725 XM56_15730 XM56_15730 frr frr 3493259 3493816 - ribosome recycling factor Rrf%3B Frr%3B ribosome-recycling factor%3B release factor 4%3B RF4%3B recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G%3B A GTPase-dependent process results in release of 50S from 70S%3B inhibited by release factor RF-1%3B essential for viability%3B structurally similar to tRNAs gene gene3146 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15730 XM56_15735 XM56_15735 XM56_15735 3493949 3494695 - uridylate kinase gene gene3147 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15735 XM56_15740 XM56_15740 tsf tsf 3494963 3495820 - elongation factor Ts EF-Ts%3B functions during elongation stage of protein translation%3B forms a dimer%3B associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu gene gene3148 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15740 XM56_15745 XM56_15745 XM56_15745 3495948 3496673 - 30S ribosomal protein S2 gene gene3149 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15745 XM56_15750 XM56_15750 XM56_15750 3497202 3497993 + methionine aminopeptidase catalyzes the removal of N-terminal amino acids from peptides and arylamides%3B generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn%2C Fe%2C or Mn gene gene3150 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15750 XM56_15755 XM56_15755 XM56_15755 3498058 3500736 + protein-PII uridylyltransferase catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein gene gene3151 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15755 XM56_15760 XM56_15760 dapD dapD 3500853 3501677 + 2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-carboxylate N-succinyltransferase catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway gene gene3152 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15760 XM56_15765 XM56_15765 XM56_15765 3501798 3502187 + hypothetical protein gene gene3153 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15765 XM56_15770 XM56_15770 XM56_15770 3502310 3502759 - flavodoxin An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group gene gene3154 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15770 XM56_15775 XM56_15775 XM56_15775 3502787 3503560 - tRNA pseudouridine synthase C catalyzes formation of pseudouridine at position 65 in tRNA-Ile1 and tRNA-Asp gene gene3155 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15775 XM56_15780 XM56_15780 XM56_15780 3503560 3503892 - hypothetical protein gene gene3156 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15780 XM56_15785 XM56_15785 XM56_15785 3504567 3505118 - secretion protein gene gene3157 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15785 XM56_15790 XM56_15790 queF queF 3505250 3506095 + 7-cyano-7-deazaguanine reductase catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis gene gene3158 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15790 XM56_15795 XM56_15795 XM56_15795 3506309 3507673 + LOG family protein gene gene3159 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15795 XM56_15800 XM56_15800 XM56_15800 3507818 3508573 + flap endonuclease-like protein similar to flap endonuclease%3B FEN family%3B protein from E. coli does not have exonuclease activity gene gene3160 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15800 XM56_15805 XM56_15805 XM56_15805 3508768 3509787 + transposase gene gene3161 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15805 XM56_15810 XM56_15810 XM56_15810 3510191 3511297 - 23S rRNA methyltransferase gene gene3162 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15810 XM56_15815 XM56_15815 XM56_15815 3511290 3511670 - hypothetical protein gene gene3163 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15815 XM56_15820 XM56_15820 XM56_15820 3511725 3512642 - transcriptional regulator Glycine cleavage system transcriptional activator%3B activates the gcvTHP operon in the presence of glycine and represses the operon in its absence gene gene3164 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15820 XM56_15825 XM56_15825 XM56_15825 3513123 3513344 - hypothetical protein gene gene3165 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15825 XM56_15830 XM56_15830 XM56_15830 3513527 3514732 + cysteine sulfinate desulfinase gene gene3166 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15830 XM56_15835 XM56_15835 XM56_15835 3514751 3515191 + Fe-S metabolism protein SufE gene gene3167 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15835 XM56_15840 XM56_15840 XM56_15840 3515195 3516004 - sulfur acceptor protein CsdL accepts sulfur from CsdA gene gene3168 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15840 XM56_15845 XM56_15845 mltA mltA 3516119 3517291 - murein transglycosylase membrane-bound%2C lytic%3B catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues gene gene3169 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15845 XM56_15850 XM56_15850 XM56_15850 3517512 3517588 + tRNA-Met tRNA gene3170 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15850 XM56_15855 XM56_15855 amiC amiC 3517968 3519218 - N-acetylmuramoyl-L-alanine amidase hydrolyzes the bond between N-acetylmuramic acid and amino acid residues in peptidoglycan gene gene3171 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15855 XM56_15860 XM56_15860 XM56_15860 3519453 3520778 + N-acetylglutamate synthase catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis gene gene3172 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15860 XM56_15865 XM56_15865 XM56_15865 3521165 3522184 - transposase gene gene3173 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15865 XM56_15870 XM56_15870 recD recD 3522368 3524269 - exonuclease V subunit alpha helicase/nuclease%3B with RecBC catalyzes the exonucleolytic cleavage of DNA%3B RecD has 5' to 3' helicase activity gene gene3174 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15870 XM56_15875 XM56_15875 recB recB 3524266 3527895 - exonuclease V subunit beta helicase/nuclease%3B with RecCD catalyzes the exonucleolytic cleavage of DNA%3B RecD has 5' to 3' helicase activity gene gene3175 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15875 XM56_15880 XM56_15880 XM56_15880 3527892 3530783 - protease degrades small peptides gene gene3176 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15880 XM56_15885 XM56_15885 recC recC 3530883 3534254 - exonuclease V subunit gamma catalyzes ATP-dependent exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield 5'-phosphooligonucleotides%3B component of the RecBCD (Exo V) helicase/nuclease complex that is essential for recombination gene gene3177 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15885 XM56_15890 XM56_15890 XM56_15890 3534400 3534786 - peptidase gene gene3178 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15890 XM56_15895 XM56_15895 XM56_15895 3534777 3535244 - membrane protein gene gene3179 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15895 XM56_15900 XM56_15900 XM56_15900 3535241 3535870 - N-terminal cleavage protein gene gene3180 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15900 XM56_15905 XM56_15905 XM56_15905 3535858 3536394 - N-terminal cleavage protein gene gene3181 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15905 XM56_15910 XM56_15910 XM56_15910 3536626 3537420 - thymidylate synthase gene gene3182 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15910 XM56_15915 XM56_15915 XM56_15915 3537427 3538299 - diacylglyceryl transferase gene gene3183 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15915 XM56_15920 XM56_15920 XM56_15920 3538427 3540673 - phosphoenolpyruvate-protein phosphotransferase member of a second PTS chain involved in nitrogen metabolism%3B PtsP phosphorylates NPr gene gene3184 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15920 XM56_15925 XM56_15925 XM56_15925 3540686 3541213 - RNA pyrophosphohydrolase hydrolyzes diadenosine polyphosphate gene gene3185 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15925 XM56_15930 XM56_15930 XM56_15930 3541239 3541436 - hypothetical protein gene gene3186 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15930 XM56_15935 XM56_15935 XM56_15935 3541911 3542597 + DNA mismatch repair protein MutH gene gene3187 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15935 XM56_15940 XM56_15940 XM56_15940 3542694 3543410 + membrane protein gene gene3188 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15940 XM56_15945 XM56_15945 tas tas 3543561 3544601 + aldo/keto reductase complements the prephenate dehydrogenase dysfunction of an Escherichia coli tyrosine auxotroph strain%3B member of the aldo/keto reductase 2 family%3B crystal structure of purified Escherichia coli protein shows bound NADPH gene gene3189 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15945 XM56_15950 XM56_15950 XM56_15950 3544661 3545875 - lysophospholipid transporter LplT gene gene3190 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15950 XM56_15955 XM56_15955 XM56_15955 3545872 3548028 - acyl-ACP synthetase Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3-phosphoethanolamine (2-acyl-GPE) formed by transacylation reactions or degradation by phospholipase A1 gene gene3191 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15955 XM56_15960 XM56_15960 XM56_15960 3548547 3549566 + transposase gene gene3192 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15960 XM56_15965 XM56_15965 XM56_15965 3549938 3552196 - biotin transporter BioY gene gene3193 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15965 XM56_15970 XM56_15970 XM56_15970 3552658 3553710 + transcriptional regulator controls transcription of galETKM gene gene3194 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15970 XM56_15975 XM56_15975 XM56_15975 3553729 3554991 - diaminopimelate decarboxylase catalyzes the decarboxylation of diaminopimelate into lysine%3B pyridoxal phosphate(PLP)-binding gene gene3195 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15975 XM56_15980 XM56_15980 XM56_15980 3555158 3556111 + transcriptional regulator activates the transcription of the lysA gene encoding diaminopimelate decarboxylase gene gene3196 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15980 XM56_15985 XM56_15985 XM56_15985 3556108 3557268 - arabinose transporter permease gene gene3197 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15985 XM56_15990 XM56_15990 XM56_15990 3557605 3558501 - LysR family transcriptional regulator gene gene3198 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15990 XM56_15995 XM56_15995 XM56_15995 3558609 3559496 + beta-lactamase gene gene3199 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_15995 XM56_16000 XM56_16000 XM56_16000 3559557 3560201 + protein-disulfide isomerase gene gene3200 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16000 XM56_16005 XM56_16005 chemotaxis protein chemotaxis protein 3560198 3561871 - disrupted pseudogene gene3201 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16005 XM56_16010 XM56_16010 XM56_16010 3561962 3562432 - hypothetical protein gene gene3202 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16010 XM56_16015 XM56_16015 XM56_16015 3562417 3563127 - regulatory membrane protein gene gene3203 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16015 XM56_16020 XM56_16020 XM56_16020 3563329 3563697 + hypothetical protein gene gene3204 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16020 XM56_16025 XM56_16025 XM56_16025 3563678 3564511 - prepilin peptidase gene gene3205 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16025 XM56_16030 XM56_16030 XM56_16030 3564526 3564807 - hypothetical protein gene gene3206 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16030 XM56_16035 XM56_16035 general secretion pathway protein GspL general secretion pathway protein GspL 3564966 3566162 - disrupted pseudogene gene3207 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16035 XM56_16040 XM56_16040 XM56_16040 3566162 3567109 - general secretion pathway protein GspK gene gene3208 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16040 XM56_16045 XM56_16045 XM56_16045 3567124 3567717 - general secretion pathway protein GspJ gene gene3209 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16045 XM56_16050 XM56_16050 XM56_16050 3567710 3567994 - general secretion pathway protein GspI gene gene3210 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16050 XM56_16055 XM56_16055 XM56_16055 3568110 3568559 - general secretion pathway protein GspG gene gene3211 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16055 XM56_16060 XM56_16060 XM56_16060 3568579 3569787 - type II secretion system protein F gene gene3212 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16060 XM56_16065 XM56_16065 XM56_16065 3569774 3571279 - general secretion pathway protein GspE gene gene3213 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16065 XM56_16070 XM56_16070 XM56_16070 3571276 3573222 - general secretion pathway protein GspD gene gene3214 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16070 XM56_16075 XM56_16075 XM56_16075 3573259 3573711 - general secretion pathway protein GspC gene gene3215 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16075 XM56_16080 XM56_16080 XM56_16080 3573839 3574255 - hypothetical protein gene gene3216 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16080 XM56_16085 XM56_16085 XM56_16085 3574958 3575713 - carbonic anhydrase gene gene3217 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16085 XM56_16090 XM56_16090 XM56_16090 3575863 3576246 - HxlR family transcriptional regulator gene gene3218 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16090 XM56_16095 XM56_16095 XM56_16095 3576349 3577098 + short-chain dehydrogenase gene gene3219 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16095 XM56_16100 XM56_16100 XM56_16100 3577166 3577471 - chaperone-modulator protein CbpM with CpbA modulates the activity of the dnaK chaperone system%3B interacts with CbpA and inhibits both the DnaJ-like co-chaperone activity and the DNA binding activity of CbpA gene gene3220 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16100 XM56_16105 XM56_16105 XM56_16105 3577478 3578431 - DNA-binding protein functional analog of DnaJ%3B co-chaperone with DnaK%2C molecular chaperone in an adaptive response to environmental stresses other than heat shock gene gene3221 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16105 XM56_16110 XM56_16110 XM56_16110 3578656 3579675 + transposase gene gene3222 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16110 XM56_16115 XM56_16115 XM56_16115 3580179 3581261 - cytochrome C peroxidase gene gene3223 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16115 XM56_16120 XM56_16120 XM56_16120 3581654 3582961 + hexuronate transporter involved in the transport of aldohexuronates gene gene3224 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16120 XM56_16125 XM56_16125 XM56_16125 3582988 3585363 + alpha-glucosidase gene gene3225 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16125 XM56_16130 XM56_16130 XM56_16130 3585440 3585862 - hypothetical protein gene gene3226 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16130 XM56_16135 XM56_16135 XM56_16135 3585990 3586460 + AsnC family transcriptional regulator gene gene3227 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16135 XM56_16140 XM56_16140 transposase transposase 3587285 3587645 + disrupted pseudogene gene3228 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16140 XM56_16145 XM56_16145 XM56_16145 3588061 3589305 - diguanylate cyclase gene gene3229 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16145 XM56_16150 XM56_16150 XM56_16150 3589388 3589783 - hypothetical protein gene gene3230 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16150 XM56_16155 XM56_16155 Fic family protein Fic family protein 3590155 3591024 - disrupted pseudogene gene3231 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16155 XM56_16160 XM56_16160 XM56_16160 3591009 3591209 + dipicolinate synthase gene gene3232 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16160 XM56_16165 XM56_16165 XM56_16165 3591352 3592554 + transposase gene gene3233 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16165 XM56_16170 XM56_16170 XM56_16170 3592661 3593059 - antitoxin gene gene3234 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16170 XM56_16175 XM56_16175 XM56_16175 3593059 3593355 - mRNA interferase MqsR gene gene3235 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16175 XM56_16180 XM56_16180 XM56_16180 3593512 3593874 - 2-hydroxyacid dehydrogenase gene gene3236 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16180 XM56_16185 XM56_16185 XM56_16185 3593940 3594200 - hypothetical protein gene gene3237 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16185 XM56_16190 XM56_16190 XM56_16190 3595414 3595878 - XRE family transcriptional regulator gene gene3238 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16190 XM56_16195 XM56_16195 XM56_16195 3596118 3596612 + membrane protein gene gene3239 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16195 XM56_16200 XM56_16200 XM56_16200 3596655 3597824 - hypothetical protein gene gene3240 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16200 XM56_16205 XM56_16205 XM56_16205 3597932 3598495 - resolvase gene gene3241 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16205 XM56_16210 XM56_16210 XM56_16210 3598704 3599138 + hypothetical protein gene gene3242 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16210 XM56_16215 XM56_16215 helicase helicase 3600368 3600484 - disrupted pseudogene gene3243 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16215 XM56_16220 XM56_16220 XM56_16220 3600474 3601982 + transposase gene gene3244 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16220 XM56_16225 XM56_16225 XM56_16225 3601969 3602694 + ATPase gene gene3245 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16225 XM56_16230 XM56_16230 integrase integrase 3602747 3604555 - disrupted pseudogene gene3246 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16230 XM56_16235 XM56_16235 XM56_16235 3604645 3604718 - tRNA-Gly tRNA gene3247 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16235 XM56_16240 XM56_16240 lysS lysS 3604889 3606406 - lysine--tRNA ligase class II%3B LysRS2%3B catalyzes a two-step reaction%2C first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B in Methanosarcina barkeri%2C LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1 gene gene3248 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16240 XM56_16245 XM56_16245 XM56_16245 3606416 3607393 - peptide chain release factor 2 catalyzes the release of newly synthesized polypeptide chains at the stop codons UAA and UGA gene gene3249 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16245 XM56_16250 XM56_16250 XM56_16250 3607960 3609693 - ssDNA exonuclease RecJ 5'-3' single-stranded-DNA-specific exonuclease gene gene3250 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16250 XM56_16255 XM56_16255 XM56_16255 3609700 3610416 - protein-disulfide isomerase DsbC%3B periplasmic protein with protein disulfide isomerase activity%3B this protein also shows disulfide oxidoreductase activity gene gene3251 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16255 XM56_16260 XM56_16260 xerD xerD 3610465 3611364 - site-specific tyrosine recombinase XerD site-specific tyrosine recombinase which cuts and rejoins DNA molecules%3B binds cooperatively to specific DNA consensus sites%3B forms a heterotetrameric complex with XerC%3B XerCD exhibit similar sequences%3B essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation%3B XerD specifically exchanges the bottom strands%3B cell division protein FtsK may regulate the XerCD complex%3B enzyme from Streptococcus group has unusual active site motifs gene gene3252 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16260 XM56_16265 XM56_16265 XM56_16265 3611471 3611989 + flavodoxin FldB An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic gene gene3253 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16265 XM56_16270 XM56_16270 XM56_16270 3612048 3613469 - membrane protein gene gene3254 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16270 XM56_16275 XM56_16275 XM56_16275 3613561 3614988 - histidine kinase part of a two-component regulatory system with CreB or PhoB%3B involved in catabolic regulation gene gene3255 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16275 XM56_16280 XM56_16280 XM56_16280 3614999 3615697 - transcriptional regulator response regulator in two-component regulatory system with CreC%3B CreB protein is phosphorylated by sensor protein phospho-CreC%3B involved in catabolic regulation gene gene3256 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16280 XM56_16285 XM56_16285 XM56_16285 3615697 3616122 - membrane protein gene gene3257 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16285 XM56_16290 XM56_16290 XM56_16290 3616103 3616369 - hypothetical protein gene gene3258 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16290 XM56_16295 XM56_16295 ygfZ ygfZ 3616636 3617628 + global regulator physiological role is not clear%3B not essential for growth but mutants grow poorly%3B mutations suppress hda null mutations%3B may be involved in regulation of ATP-DnaA levels%3B may also be involved in regulation of tRNA modifications%3B can bind folic acid and tetrahydrofolate%3B forms a three domain ring-like structure with a central channel%3B structurally similar to DMGO protein from A. globiformis%3B shows sequence similarity to yeast CAF17 transcriptional regulato%3B Hda supressor gene gene3259 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16295 XM56_16300 XM56_16300 XM56_16300 3617824 3618843 + transposase gene gene3260 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16300 XM56_16305 XM56_16305 XM56_16305 3619255 3619938 - hemolysin gene gene3261 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16305 XM56_16310 XM56_16310 XM56_16310 3620169 3620771 + hydrolase gene gene3262 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16310 XM56_16315 XM56_16315 XM56_16315 3620784 3621533 - NAD(P)-binding oxidoreductase gene gene3263 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16315 XM56_16320 XM56_16320 XM56_16320 3621549 3621986 - hypothetical protein gene gene3264 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16320 XM56_16325 XM56_16325 XM56_16325 3622320 3625208 - glycine dehydrogenase acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine gene gene3265 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16325 XM56_16330 XM56_16330 XM56_16330 3625308 3625694 - glycine cleavage system protein H part of multienzyme complex composed of H%2C L%2C P%2C and T proteins which catalyzes oxidation of glycine to yield carbon dioxide%2C ammonia%2C 5%2C10-CH2-H4folate and a reduced pyridine nucleotide%3B protein H is involved in transfer of methylamine group from the P to T protein%3B covalently bound to a lipoyl cofactor gene gene3266 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16330 XM56_16335 XM56_16335 gcvT gcvT 3625761 3626858 - glycine cleavage system protein T catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate%2C causing the release of ammonia and the generation of reduced GcvH protein gene gene3267 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16335 XM56_16340 XM56_16340 XM56_16340 3627251 3628465 - oxidoreductase gene gene3268 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16340 XM56_16345 XM56_16345 XM56_16345 3628553 3629722 - 2-octaprenyl-6-methoxyphenyl hydroxylase Oxygenase that introduces the hydroxyl group at carbon four of 2-octaprenyl-6-methoxyphenol resulting in the formation of 2-octaprenyl-6-methoxy-1%2C4-benzoquinone gene gene3269 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16345 XM56_16350 XM56_16350 XM56_16350 3629726 3631039 - proline aminopeptidase P II exopeptidase able to cleave the peptide bond of the last amino acid if linked to a proline residue%3B substrate can be as short as a dipeptide gene gene3270 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16350 XM56_16355 XM56_16355 XM56_16355 3631094 3631672 - hypothetical protein the crystal structure of Haemophilus influenzae HI0817 showed that this protein forms dimers%3B function unknown gene gene3271 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16355 XM56_16360 XM56_16360 XM56_16360 3632128 3632457 + Z-ring-associated protein gene gene3272 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16360 XM56_16365 XM56_16365 XM56_16365 3632961 3633557 + 5-formyltetrahydrofolate cyclo-ligase ygfA expression increases five to eight fold in Escherichia coli cells growing as biofilms%3B unknown function gene gene3273 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16365 XM56_16370 XM56_16370 eno eno 3633703 3634998 - enolase catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis gene gene3274 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16370 XM56_16375 XM56_16375 pyrG pyrG 3635078 3636715 - CTP synthetase CTP synthase%3B cytidine triphosphate synthetase%3B catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen%3B in Escherichia coli this enzyme forms a homotetramer gene gene3275 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16375 XM56_16380 XM56_16380 mazG mazG 3636927 3637763 - nucleoside triphosphate hydrolase functions in degradation of stringent response intracellular messenger ppGpp%3B in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF%3B activity of MazG is inhibited by MazEF in vitro%3B ppGpp inhibits mazEF expression%3B MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation%3B MazG also interacts with the GTPase protein Era gene gene3276 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16380 XM56_16385 XM56_16385 relA relA 3638051 3640285 - (p)ppGpp synthetase (p)ppGpp synthetase%3B catalyzes the formation of pppGpp and ppGpp from ATP and GTP or GDP gene gene3277 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16385 XM56_16390 XM56_16390 rumA rumA 3640295 3641626 - 23S rRNA methyltransferase in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA%3B binds an iron-sulfur cluster [4Fe-4S] gene gene3278 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16390 XM56_16395 XM56_16395 XM56_16395 3641683 3644565 + histidine kinase part of the two-component regulatory system with UvrY%3B involved in the regulation of carbon metabolism via the csrA/csrB regulatory system gene gene3279 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16395 XM56_16400 XM56_16400 XM56_16400 3644678 3646114 - serine endoprotease protease Do%3B required at high temperature%3B degrades damaged proteins gene gene3280 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16400 XM56_16405 XM56_16405 XM56_16405 3646413 3647930 - deoxyguanosinetriphosphate triphosphohydrolase gene gene3281 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16405 XM56_16410 XM56_16410 XM56_16410 3648139 3648840 + 5'-methylthioadenosine nucleosidase enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine gene gene3282 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16410 XM56_16415 XM56_16415 XM56_16415 3648840 3649703 + Vitamin B12-binding protein gene gene3283 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16415 XM56_16420 XM56_16420 XM56_16420 3649703 3650317 + hypothetical protein gene gene3284 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16420 XM56_16425 XM56_16425 XM56_16425 3651170 3651514 - iron-sulfur cluster insertion protein ErpA essential respiratory protein A%3B may be involved in the transfer of iron-sulfur clusters%3B essential for growth using oxygen or alternate electron acceptors gene gene3285 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16425 XM56_16430 XM56_16430 XM56_16430 3651632 3653065 - H(+)/Cl(-) exchange transporter ClcA gene gene3286 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16430 XM56_16435 XM56_16435 XM56_16435 3653332 3654612 + glutamate-1-semialdehyde aminotransferase Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway gene gene3287 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16435 XM56_16440 XM56_16440 XM56_16440 3655027 3656418 + nitrate/nitrite transporter NarK involved in the transport of nitrate and nitrite gene gene3288 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16440 XM56_16445 XM56_16445 XM56_16445 3656694 3658688 - iron ABC transporter gene gene3289 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16445 XM56_16450 XM56_16450 XM56_16450 3658688 3659617 - iron-hydroxamate transporter substrate-binding subunit gene gene3290 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16450 XM56_16455 XM56_16455 XM56_16455 3659617 3660414 - iron-hydroxamate transporter ATP-binding subunit part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter gene gene3291 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16455 XM56_16460 XM56_16460 mrcB mrcB 3660668 3663172 - bifunctional glycosyl transferase/transpeptidase penicillin-binding protein 1b%3B contains transglycosylase and transpeptidase activity%3B major enzyme for peptidoglycan biosynthesis in Escherichia coli%3B transmembrane protein%3B forms dimers%3B three variants%2C one of which may be a degradation product%2C while the other appears to result from an alternative initiation site%2C are found within the cell gene gene3292 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16460 XM56_16465 XM56_16465 XM56_16465 3663476 3665995 - ATP-dependent helicase HrpB similar in sequence to the ATP-dependent RNA helicase HrpA gene gene3293 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16465 XM56_16470 XM56_16470 XM56_16470 3666039 3666596 + 2'-5' RNA ligase gene gene3294 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16470 XM56_16475 XM56_16475 XM56_16475 3666608 3667351 + transcriptional regulator gene gene3295 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16475 XM56_16480 XM56_16480 dksA dksA 3667531 3667986 + RNA polymerase-binding transcription factor gene gene3296 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16480 XM56_16485 XM56_16485 XM56_16485 3668128 3669057 + glutamyl-Q tRNA(Asp) ligase gene gene3297 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16485 XM56_16490 XM56_16490 pcnB pcnB 3669240 3670676 + poly(A) polymerase I Polymerase that creates the 3' poly(A) tail found in some mRNA's gene gene3298 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16490 XM56_16495 XM56_16495 XM56_16495 3670685 3671164 + 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase gene gene3299 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16495 XM56_16500 XM56_16500 panB panB 3671244 3672038 + 3-methyl-2-oxobutanoate hydroxymethyltransferase catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5%2C10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate gene gene3300 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16500 XM56_16505 XM56_16505 panC panC 3672288 3673142 + pantoate--beta-alanine ligase catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine gene gene3301 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16505 XM56_16510 XM56_16510 XM56_16510 3673300 3673680 + aspartate decarboxylase gene gene3302 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16510 XM56_16515 XM56_16515 XM56_16515 3673813 3675120 - hypothetical protein gene gene3303 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16515 XM56_16520 XM56_16520 XM56_16520 3675496 3676266 - ABC transporter permease gene gene3304 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16520 XM56_16525 XM56_16525 XM56_16525 3676263 3677189 - ABC transporter gene gene3305 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16525 XM56_16530 XM56_16530 XM56_16530 3677422 3678084 + carbonic anhydrase catalyzes the interconversion of bicarbonate and carbon dioxide gene gene3306 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16530 XM56_16535 XM56_16535 XM56_16535 3678173 3678709 - hypoxanthine phosphoribosyltransferase catalyzes the formation of inosine monophosphate from hypoxanthine and 5-phospho-alpha-D-ribose 1-diphosphate gene gene3307 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16535 XM56_16540 XM56_16540 XM56_16540 3678825 3680417 - multicopper oxidase laccase%3B copper-stimulated phenoloxidase and ferroxidase which may be involved in copper detoxification gene gene3308 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16540 XM56_16545 XM56_16545 XM56_16545 3680651 3680998 + hypothetical protein gene gene3309 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16545 XM56_16550 XM56_16550 XM56_16550 3681113 3681976 + spermidine synthase gene gene3310 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16550 XM56_16555 XM56_16555 XM56_16555 3682001 3682795 + S-adenosylmethionine decarboxylase S-adenosylmethionine provides the aminopropyl moiety required for spermidine biosynthesis from putrescine gene gene3311 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16555 XM56_16560 XM56_16560 XM56_16560 3682859 3683098 - hypothetical protein gene gene3312 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16560 XM56_16565 XM56_16565 XM56_16565 3683622 3684509 + aromatic amino acid exporter gene gene3313 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16565 XM56_16570 XM56_16570 XM56_16570 3684553 3684915 - hypothetical protein gene gene3314 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16570 XM56_16575 XM56_16575 XM56_16575 3685117 3687714 - bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate gene gene3315 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16575 XM56_16580 XM56_16580 XM56_16580 3688286 3690577 - outer membrane receptor protein Fep%3B Cbt%3B Cbr%3B FeuB%3B FepA%3B PfeA%3B IroN%3B BfeA%3B outer membrane receptor of ferric enterobactin and colicins B and D%3B interacts with the TonB-ExbBD complex which catalyzes the translocation of the siderophore to the periplasmic space gene gene3316 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16580 XM56_16585 XM56_16585 XM56_16585 3690804 3691811 + AraC family transcriptional regulator gene gene3317 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16585 XM56_16590 XM56_16590 XM56_16590 3692018 3693340 + hypothetical protein gene gene3318 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16590 XM56_16595 XM56_16595 XM56_16595 3693423 3694850 - dihydrolipoamide dehydrogenase E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex%3B catalyzes the oxidation of dihydrolipoamide to lipoamide gene gene3319 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16595 XM56_16600 XM56_16600 aceF aceF 3695335 3697215 - pyruvate dehydrogenase E2 component of pyruvate dehydrogenase multienzyme complex%3B in Escherichia coli AceF contains three N-terminal lipoyl domains gene gene3320 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16600 XM56_16605 XM56_16605 aceE aceE 3697229 3699892 - pyruvate dehydrogenase E1 component%3B part of pyruvate dehydrogenase%3B forms a complex with DlaT and LpdC gene gene3321 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16605 XM56_16610 XM56_16610 pdhR pdhR 3700069 3700833 - transcriptional regulator PdhR activates lctPRD operon%3B autoregulates itself through repression of pdhR-aceEF-lpdA operon%3B regulates pyruvate dehydrogenase complex gene gene3322 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16610 XM56_16615 XM56_16615 XM56_16615 3701534 3702898 + aromatic amino acid transporter gene gene3323 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16615 XM56_16620 XM56_16620 XM56_16620 3703056 3703910 - regulatory protein AmpE involved in regulation of beta-lactamase%3B putative signaling protein gene gene3324 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16620 XM56_16625 XM56_16625 XM56_16625 3704054 3704629 - N-acetyl-anhydromuranmyl-L-alanine amidase gene gene3325 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16625 XM56_16630 XM56_16630 XM56_16630 3704748 3705656 + nicotinate-nucleotide pyrophosphorylase catalyzes the formation of pyridine-2%2C3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide gene gene3326 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16630 XM56_16635 XM56_16635 XM56_16635 3705861 3706295 + major pilin subunit gene gene3327 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16635 XM56_16640 XM56_16640 XM56_16640 3706300 3707766 + transporter HofB gene gene3328 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16640 XM56_16645 XM56_16645 XM56_16645 3707763 3708962 + type IV pilin biogenesis protein gene gene3329 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16645 XM56_16650 XM56_16650 XM56_16650 3709098 3710141 - guanosine 5'-monophosphate oxidoreductase catalyzes the NADPH-dependent deamination of GMP to inosine monophosphate gene gene3330 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16650 XM56_16655 XM56_16655 coaE coaE 3710435 3711055 + dephospho-CoA kinase catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A%3B involved in coenzyme A biosynthesis gene gene3331 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16655 XM56_16660 XM56_16660 XM56_16660 3711052 3711804 + hypothetical protein gene gene3332 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16660 XM56_16665 XM56_16665 XM56_16665 3712025 3712231 + DNA gyrase inhibitor inhibits supercoiling by DNA gyrase by binding to the GyrB subunit gene gene3333 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16665 XM56_16670 XM56_16670 XM56_16670 3712303 3712689 - nucleoside triphosphate hydrolase gene gene3334 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16670 XM56_16675 XM56_16675 secA secA 3712823 3715537 - preprotein translocase subunit SecA functions in protein export%3B can interact with acidic membrane phospholipids and the SecYEG protein complex%3B binds to preproteins%3B binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein%3B ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane%3B additional proteins SecD/F/YajC aid SecA recycling%3B exists in an equilibrium between monomers and dimers%3B may possibly form higher order oligomers%3B proteins in this cluster correspond SecA1%3B SecA2 is not essential and seems to play a role in secretion of a subset of proteins gene gene3335 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16675 XM56_16680 XM56_16680 XM56_16680 3715615 3716148 - Secretion monitor gene gene3336 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16680 XM56_16685 XM56_16685 XM56_16685 3716177 3716701 + hypothetical protein gene gene3337 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16685 XM56_16690 XM56_16690 lpxC lpxC 3716837 3717757 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase zinc-dependent%3B catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis gene gene3338 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16690 XM56_16695 XM56_16695 XM56_16695 3717858 3719009 - cell division protein FtsZ GTPase%3B similar structure to tubulin%3B forms ring-shaped polymers at the site of cell division%3B other proteins such as FtsA%2C ZipA%2C and ZapA%2C interact with and regulate FtsZ function gene gene3339 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16695 XM56_16700 XM56_16700 ftsA ftsA 3719082 3720338 - cell division protein FtsA ATP-binding involved in recruitment of FtsK to Z ring%3B essential cell division protein%3B colocalizes with FtsZ through direct interaction to the septal ring structure%3B structurally similar to eukaryotic actin%3B binds directly to the cell membrane gene gene3340 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16700 XM56_16705 XM56_16705 XM56_16705 3720335 3721192 - cell division protein FtsQ involved in septum formation gene gene3341 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16705 XM56_16710 XM56_16710 ddl ddl 3721194 3722114 - D-alanine--D-alanine ligase D-alanine--D-alanine ligase%3B DdlA%3B DdlB%3B cytoplasmic%3B catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis%3B there are two forms of this enzyme in Escherichia coli gene gene3342 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16710 XM56_16715 XM56_16715 XM56_16715 3722107 3723582 - UDP-N-acetylmuramate--alanine ligase gene gene3343 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16715 XM56_16720 XM56_16720 murG murG 3723656 3724723 - UDP-diphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase N-acetylglucosaminyl transferase%3B UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase%3B involved in cell wall formation%3B inner membrane-associated%3B last step of peptidoglycan synthesis gene gene3344 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16720 XM56_16725 XM56_16725 XM56_16725 3724720 3725922 - cell division protein FtsW integral membrane protein involved in stabilizing FstZ ring during cell division gene gene3345 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16725 XM56_16730 XM56_16730 murD murD 3725922 3727256 - UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase UDP-N-acetylmuramoylalanine--D-glutamate ligase%3B involved in peptidoglycan biosynthesis%3B cytoplasmic%3B catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation gene gene3346 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16730 XM56_16735 XM56_16735 mraY mraY 3727259 3728341 - phospho-N-acetylmuramoyl-pentapeptide-transferase First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan gene gene3347 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16735 XM56_16740 XM56_16740 murF murF 3728335 3729699 - UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase gene gene3348 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16740 XM56_16745 XM56_16745 murE murE 3729696 3731183 - UDP-N-acetylmuramoylalanyl-D-glutamate--2%2C6-diaminopimelate ligase involved in cell wall formation%3B peptidoglycan synthesis%3B cytoplasmic enzyme%3B catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate gene gene3349 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16745 XM56_16750 XM56_16750 XM56_16750 3731170 3732933 - cell division protein FtsI penicillin-binding protein 3%3B transpeptidase involved in septal peptidoglycan synthesis gene gene3350 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16750 XM56_16755 XM56_16755 XM56_16755 3732994 3733314 - cell division protein FtsL gene gene3351 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16755 XM56_16760 XM56_16760 XM56_16760 3733311 3734273 - 16S rRNA methyltransferase gene gene3352 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16760 XM56_16765 XM56_16765 XM56_16765 3734276 3734734 - cell division protein MraZ gene gene3353 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16765 XM56_16770 XM56_16770 XM56_16770 3735282 3735536 - hypothetical protein gene gene3354 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16770 XM56_16775 XM56_16775 XM56_16775 3735846 3736286 + membrane protein gene gene3355 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16775 XM56_16780 XM56_16780 XM56_16780 3736342 3737346 - transcriptional regulator binds D-fructose as an inducer%3B involved in regulation of operons for central pathways of carbon metabolism gene gene3356 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16780 XM56_16785 XM56_16785 ilvH ilvH 3737689 3738183 - acetolactate synthase 3 regulatory subunit with IlvI catalyzes the formation of 2-acetolactate from pyruvate%2C the small subunit is required for full activity and valine sensitivity%3B E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates%2C valine sensitivity and affinity for cofactors%3B also known as acetolactate synthase 3 small subunit gene gene3357 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16785 XM56_16790 XM56_16790 XM56_16790 3738186 3739913 - acetolactate synthase 3 catalytic subunit catalyzes the formation of 2-acetolactate from pyruvate%2C leucine sensitive gene gene3358 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16790 XM56_16795 XM56_16795 XM56_16795 3740362 3742161 - long-chain fatty acid--CoA ligase gene gene3359 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16795 XM56_16800 XM56_16800 leuO leuO 3742493 3743449 - transcriptional regulator activator for leuABCD operon%3B member of LysR family of transcriptional activators gene gene3360 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16800 XM56_16805 XM56_16805 XM56_16805 3744569 3746131 + 2-isopropylmalate synthase gene gene3361 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16805 XM56_16810 XM56_16810 XM56_16810 3746134 3747225 + 3-isopropylmalate dehydrogenase gene gene3362 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16810 XM56_16815 XM56_16815 XM56_16815 3747227 3748639 + isopropylmalate isomerase dehydratase component%2C catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate gene gene3363 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16815 XM56_16820 XM56_16820 leuD leuD 3748654 3749274 + isopropylmalate isomerase catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis%3B forms a heterodimer of LeuC/D gene gene3364 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16820 XM56_16825 XM56_16825 XM56_16825 3749573 3749671 + tryptophanase gene gene3365 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16825 XM56_16830 XM56_16830 tnaA tnaA 3749932 3751332 + cysteine desulfhydrase tryptophan indole-lyase%3B catalyzes the formation of indole and pyruvate from tryptophan%3B also has xysteine desulfhydrase activity gene gene3366 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16830 XM56_16835 XM56_16835 XM56_16835 3751441 3752703 + tryptophan permease tryptophan transporter of high affinity gene gene3367 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16835 XM56_16840 XM56_16840 XM56_16840 3752889 3753908 + transposase gene gene3368 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16840 XM56_16845 XM56_16845 XM56_16845 3754288 3755469 - sugar transporter gene gene3369 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16845 XM56_16850 XM56_16850 XM56_16850 3755733 3758165 - formate acetyltransferase gene gene3370 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16850 XM56_16855 XM56_16855 XM56_16855 3758170 3759069 - pyruvate formate lyase-activating protein gene gene3371 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16855 XM56_16860 XM56_16860 XM56_16860 3759174 3760835 + transcriptional regulator SgrR activates sgrS under glucose-phosphate stress conditions gene gene3372 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16860 XM56_16865 XM56_16865 XM56_16865 3760970 3761320 + hypothetical protein gene gene3373 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16865 XM56_16870 XM56_16870 XM56_16870 3761337 3761870 - hypothetical protein gene gene3374 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16870 XM56_16875 XM56_16875 tbpA tbpA 3762591 3763580 + thiamine ABC transporter substrate-binding protein part of the thiamine and TPP transport system tbpA-thiPQ gene gene3375 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16875 XM56_16880 XM56_16880 thiP thiP 3763556 3765163 + thiamine ABC transporter permease permease%3B with TbpA and ThiQ functions in transport of thiamine and thiamine pyrophosphate into the cell%3B repressed in presence of exogenous thiamine gene gene3376 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16880 XM56_16885 XM56_16885 thiQ thiQ 3765150 3765851 + thiamine ABC transporter ATP-binding protein with TbpA and ThiP is part of the thiamine and TPP transport system gene gene3377 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16885 XM56_16890 XM56_16890 XM56_16890 3765838 3766608 - membrane protein gene gene3378 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16890 XM56_16895 XM56_16895 XM56_16895 3766943 3769315 + DNA polymerase II Has polymerase%2C DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C gene gene3379 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16895 XM56_16900 XM56_16900 XM56_16900 3769584 3772490 + ATP-dependent helicase transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP%2C when it is trapped or immobilized on tightly supercoiled DNA gene gene3380 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16900 XM56_16905 XM56_16905 XM56_16905 3773481 3776555 + adhesin gene gene3381 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16905 XM56_16910 XM56_16910 XM56_16910 3777028 3777648 + 23S rRNA pseudouridylate synthase catalyzes the synthesis of pseudouridine from uracil-746 in 23S ribosomal RNA and from uracil-32 in the anticodon stem and loop of transfer RNAs gene gene3382 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16910 XM56_16915 XM56_16915 djlA djlA 3777734 3778561 - Dna-J like membrane chaperone protein functions as a co-chaperone with DnaK%3B involved in regulation of colanic acid capsule%3B inner membrane protein%3B dimerized via transmembrane domain%3B J-like domain is cytoplasmic and can functionally substitute for DnaJ%3B stimulates synthesis of colanic acid mucoid capsule through the RcsB/C signal transduction system gene gene3383 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16915 XM56_16920 XM56_16920 XM56_16920 3778746 3781112 + LPS biosynthesis protein is involved in outer membrane permeability gene gene3384 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16920 XM56_16925 XM56_16925 XM56_16925 3781180 3782484 + peptidylprolyl isomerase Chaperone involved in the folding of extracytoplasmic proteins%2C especially OmpA%2C OmpF and LamB gene gene3385 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16925 XM56_16930 XM56_16930 pdxA pdxA 3782468 3783463 + 4-hydroxythreonine-4-phosphate dehydrogenase catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate) gene gene3386 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16930 XM56_16935 XM56_16935 ksgA ksgA 3783456 3784274 + 16S rRNA methyltransferase in Escherichia coli this enzyme catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA%3B mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin%3B members of this protein family have secondary functions gene gene3387 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16935 XM56_16940 XM56_16940 apaG apaG 3784288 3784665 + heavy metal transporter protein associated with Co2+ and Mg2+ efflux gene gene3388 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16940 XM56_16945 XM56_16945 apaH apaH 3784680 3785558 + diadenosine tetraphosphatase hydrolyzes P(1)%2CP(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP gene gene3389 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16945 XM56_16950 XM56_16950 folA folA 3785752 3786234 - dihydrofolate reductase catalyzes the reduction of dihydrofolate to tetrahydrofolate gene gene3390 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16950 XM56_16955 XM56_16955 XM56_16955 3786384 3786848 - hypothetical protein gene gene3391 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16955 XM56_16960 XM56_16960 XM56_16960 3786848 3787645 - membrane protein gene gene3392 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16960 XM56_16965 XM56_16965 XM56_16965 3787798 3788412 + lysine transporter LysE gene gene3393 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16965 XM56_16970 XM56_16970 carB carB 3788747 3791980 - carbamoyl phosphate synthase large subunit four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate%3B CarB is responsible for the amidotransferase activity gene gene3394 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16970 XM56_16975 XM56_16975 XM56_16975 3791997 3793160 - carbamoyl phosphate synthase small subunit catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways%3B forms an octamer composed of four CarAB dimers gene gene3395 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16975 XM56_16980 XM56_16980 XM56_16980 3793632 3794453 - dihydrodipicolinate reductase catalyzes the reduction of 2%2C3-dihydrodipicolinate to 2%2C3%2C4%2C5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis gene gene3396 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16980 XM56_16985 XM56_16985 ispH ispH 3794972 3795925 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP)%3B functions in the nonmevalonate isoprenoid biosynthesis pathway gene gene3397 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16985 XM56_16990 XM56_16990 XM56_16990 3795906 3796406 - peptidylprolyl isomerase rotamase%3B accelerates isomerization of the peptidyl prolyl bond%2C involved in the folding of proteases gene gene3398 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16990 XM56_16995 XM56_16995 lspA lspA 3796408 3796917 - lipoprotein signal peptidase lipoprotein signal peptidase%3B integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis gene gene3399 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_16995 XM56_17000 XM56_17000 ileS ileS 3796917 3799733 - isoleucine--tRNA ligase IleRS%3B catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile)%3B since isoleucine and other amino acids such as valine are similar%2C there are additional editing function in this enzyme%3B one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile)%3B there are two active sites%2C one for aminoacylation and one for editing%3B class-I aminoacyl-tRNA synthetase family type 1 subfamily%3B some organisms carry two different copies of this enzyme gene gene3400 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17000 XM56_17005 XM56_17005 XM56_17005 3799765 3800703 - FMN adenylyltransferase gene gene3401 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17005 XM56_17010 XM56_17010 XM56_17010 3800808 3801065 - hypothetical protein gene gene3402 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17010 XM56_17015 XM56_17015 rpsT rpsT 3801117 3801380 + 30S ribosomal protein S20 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase gene gene3403 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17015 XM56_17020 XM56_17020 nhaR nhaR 3801524 3802423 - transcriptional regulator Na+/H+ antiporter regulatory protein%3B activates the genes nhaA and osmC gene gene3404 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17020 XM56_17025 XM56_17025 nhaA nhaA 3802574 3803752 - pH-dependent sodium/proton antiporter exports sodium by using the electrochemical proton gradient to allow protons into the cell%3B functions in adaptation to high salinity and alkaline pH%3B activity increases at higher pH%3B downregulated at acidic pH gene gene3405 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17025 XM56_17030 XM56_17030 XM56_17030 3803984 3805114 - molecular chaperone DnaJ chaperone Hsp40%3B co-chaperone with DnaK%3B Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins%2C also in an autonomous%2C dnaK-independent fashion gene gene3406 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17030 XM56_17035 XM56_17035 dnaK dnaK 3805226 3807133 - molecular chaperone DnaK heat shock protein 70%3B assists in folding of nascent polypeptide chains%3B refolding of misfolded proteins%3B utilizes ATPase activity to help fold%3B co-chaperones are DnaJ and GrpE%3B multiple copies in some bacteria gene gene3407 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17035 XM56_17040 XM56_17040 XM56_17040 3807506 3808099 + hypothetical protein gene gene3408 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17040 XM56_17045 XM56_17045 XM56_17045 3808334 3810832 + crystallin gene gene3409 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17045 XM56_17050 XM56_17050 XM56_17050 3811088 3812455 - MFS transporter gene gene3410 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17050 XM56_17055 XM56_17055 mogA mogA 3812584 3813171 - molybdenum cofactor biosynthesis protein MogA forms a trimer%3B related to eukaryotic protein gephyrin%3B functions during molybdenum cofactor biosynthesis gene gene3411 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17055 XM56_17060 XM56_17060 XM56_17060 3813329 3814282 - transaldolase gene gene3412 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17060 XM56_17065 XM56_17065 XM56_17065 3814693 3815469 + hypothetical protein gene gene3413 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17065 XM56_17070 XM56_17070 XM56_17070 3815654 3816673 + transposase gene gene3414 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17070 XM56_17075 XM56_17075 XM56_17075 3817083 3818372 - threonine synthase gene gene3415 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17075 XM56_17080 XM56_17080 XM56_17080 3818376 3819305 - serine kinase gene gene3416 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17080 XM56_17085 XM56_17085 thrA thrA 3819308 3821767 - aspartate kinase multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine%3B functions in a number of amino acid biosynthetic pathways gene gene3417 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17085 XM56_17090 XM56_17090 XM56_17090 3822689 3822829 - hypothetical protein gene gene3418 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17090 XM56_17095 XM56_17095 XM56_17095 3822932 3823648 + TorR family transcriptional regulator gene gene3419 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17095 XM56_17100 XM56_17100 XM56_17100 3823730 3824197 - hypothetical protein gene gene3420 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17100 XM56_17105 XM56_17105 XM56_17105 3824422 3825288 + transcriptional regulator AraC family%3B binds to the right arm of the replication origin oriC gene gene3421 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17105 XM56_17110 XM56_17110 XM56_17110 3825285 3825932 - phosphoglycerate mutase catalyzes reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate gene gene3422 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17110 XM56_17115 XM56_17115 yjjX yjjX 3825989 3826516 + inositol monophosphatase pyrophosphatase%3B has activity against dUTP and dITP%3B the crystal structure of the Vibrio protein showed similarity to Methanococcus janaschii Mj0226%3B in Vibrio cholerae this gene is part of the Mba operon that is involved in regulation and maintenance of biofilms%3B in Escherichia coli overexpression of this gene leads to resistance to an HMP analog gene gene3423 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17115 XM56_17120 XM56_17120 XM56_17120 3826525 3826875 - Trp operon repressor gene gene3424 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17120 XM56_17125 XM56_17125 XM56_17125 3827044 3828963 - lytic murein transglycosylase catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine residues in peptidoglycan gene gene3425 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17125 XM56_17130 XM56_17130 XM56_17130 3829511 3832222 + carbonate dehydratase gene gene3426 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17130 XM56_17135 XM56_17135 XM56_17135 3832427 3833059 + membrane protein gene gene3427 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17135 XM56_17140 XM56_17140 XM56_17140 3833056 3834402 + DeoR faimly transcriptional regulator gene gene3428 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17140 XM56_17145 XM56_17145 XM56_17145 3834408 3834917 + membrane protein gene gene3429 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17145 XM56_17150 XM56_17150 XM56_17150 3835276 3836943 + ABC transporter ATP-binding protein ChvD%3B in Agrobacterium tumefaciens%2C mutations in both Walker boxes were found to affect virulence gene gene3430 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17150 XM56_17155 XM56_17155 XM56_17155 3837002 3838132 - cell division protein Fic gene gene3431 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17155 XM56_17160 XM56_17160 XM56_17160 3838213 3839124 - LysR family transcriptional regulator gene gene3432 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17160 XM56_17165 XM56_17165 XM56_17165 3839270 3840271 + NADPH:quinone reductase gene gene3433 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17165 XM56_17170 XM56_17170 XM56_17170 3840268 3841551 - transcriptional regulator catalyzes the formation of NAD(+) from nicotinamide ribonucleotide%3B catalyzes the formation of nicotinamide mononucleotide from nicotinamide riboside%3B also has a regulatory function gene gene3434 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17170 XM56_17175 XM56_17175 XM56_17175 3841625 3843007 - DNA repair protein RadA Sms%3B stabilizes the strand-invasion intermediate during the DNA repair%3B involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents gene gene3435 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17175 XM56_17180 XM56_17180 serB serB 3843180 3844157 - phosphoserine phosphatase catalyzes the formation of serine from O-phosphoserine gene gene3436 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17180 XM56_17185 XM56_17185 XM56_17185 3844393 3845070 + hypothetical protein gene gene3437 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17185 XM56_17190 XM56_17190 deoD deoD 3845125 3845844 - purine nucleoside phosphorylase catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate gene gene3438 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17190 XM56_17195 XM56_17195 XM56_17195 3846065 3847288 - phosphopentomutase gene gene3439 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17195 XM56_17200 XM56_17200 XM56_17200 3847342 3848664 - thymidine phosphorylase gene gene3440 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17200 XM56_17205 XM56_17205 XM56_17205 3848767 3849564 - deoxyribose-phosphate aldolase catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate gene gene3441 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17205 XM56_17210 XM56_17210 XM56_17210 3849940 3851217 - nucleoside transporter NupC gene gene3442 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17210 XM56_17215 XM56_17215 XM56_17215 3851413 3852210 - deoxyribonuclease YjjV gene gene3443 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17215 XM56_17220 XM56_17220 XM56_17220 3852231 3853484 - phosphoesterase gene gene3444 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17220 XM56_17225 XM56_17225 XM56_17225 3853928 3854542 - periplasmic protein gene gene3445 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17225 XM56_17230 XM56_17230 prfC prfC 3854854 3856443 - peptide chain release factor 3 stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred%3B GDP/GTP-binding protein gene gene3446 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17230 XM56_17235 XM56_17235 rimI rimI 3856694 3857137 - ribosomal-protein-alanine acetyltransferase alanine acetyltransferase that specifically acetylates ribosomal protein S18 gene gene3447 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17235 XM56_17240 XM56_17240 XM56_17240 3857082 3857519 - DNA polymerase III subunit psi with the chi subunit binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB gene gene3448 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17240 XM56_17245 XM56_17245 XM56_17245 3857632 3858675 + 16S rRNA methyltransferase gene gene3449 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17245 XM56_17250 XM56_17250 XM56_17250 3858694 3859686 - aldo/keto reductase gene gene3450 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17250 XM56_17255 XM56_17255 XM56_17255 3859803 3860729 + transcriptional regulator gene gene3451 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17255 XM56_17260 XM56_17260 XM56_17260 3860879 3860965 + tRNA-Leu tRNA gene3452 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17260 XM56_17265 XM56_17265 XM56_17265 3861043 3861318 - membrane protein gene gene3453 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17265 XM56_17270 XM56_17270 XM56_17270 3861654 3862754 + diguanylate cyclase gene gene3454 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17270 XM56_17275 XM56_17275 XM56_17275 3863460 3865616 - amino acid ABC transporter substrate-binding protein gene gene3455 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17275 XM56_17280 XM56_17280 XM56_17280 3866102 3867247 - iron transporter gene gene3456 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17280 XM56_17285 XM56_17285 XM56_17285 3867451 3868386 + fructokinase gene gene3457 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17285 XM56_17290 XM56_17290 XM56_17290 3868772 3870223 + porin gene gene3458 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17290 XM56_17295 XM56_17295 XM56_17295 3870291 3871661 + PTS system sucrose-specific transporter subuits IIBC phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel gene gene3459 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17295 XM56_17300 XM56_17300 XM56_17300 3871661 3873070 + glycosyl hydrolase family 32 gene gene3460 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17300 XM56_17305 XM56_17305 XM56_17305 3873117 3874151 + sucrose operon repressor gene gene3461 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17305 XM56_17310 XM56_17310 XM56_17310 3874138 3876057 + transcriptional regulator Positively regulates the dhaKLM operon from a sigma-70 promoter gene gene3462 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17310 XM56_17315 XM56_17315 XM56_17315 3876060 3877103 - pectin esterase gene gene3463 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17315 XM56_17320 XM56_17320 XM56_17320 3877639 3878505 + hypothetical protein gene gene3464 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17320 XM56_17325 XM56_17325 XM56_17325 3878532 3879707 + transporter gene gene3465 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17325 XM56_17330 XM56_17330 XM56_17330 3879724 3881124 + hypothetical protein gene gene3466 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17330 XM56_17335 XM56_17335 XM56_17335 3881191 3882690 + oxidoreductase gene gene3467 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17335 XM56_17340 XM56_17340 XM56_17340 3882721 3884421 + transferase gene gene3468 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17340 XM56_17345 XM56_17345 XM56_17345 3884601 3885803 + glycosyl transferase gene gene3469 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17345 XM56_17350 XM56_17350 XM56_17350 3885849 3887282 - dihydroxyacetone kinase gene gene3470 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17350 XM56_17355 XM56_17355 XM56_17355 3887316 3887948 - dihydroxyacetone kinase with DhaK and DhaM catalyzes the phosphorylation of dihydroxyacetone gene gene3471 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17355 XM56_17360 XM56_17360 XM56_17360 3887966 3889033 - dihydroxyacetone kinase with DhaL and DhaM forms dihydroxyacetone kinase%2C which is responsible for phosphorylating dihydroxyacetone%3B DhaK is the dihydroxyacetone binding subunit of the dihydroxyacetone kinase gene gene3472 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17360 XM56_17365 XM56_17365 gldA gldA 3889128 3890222 - glycerol dehydrogenase forms dimers and octamers%3B involved in conversion of glycerol to dihydroxy-acetone gene gene3473 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17365 XM56_17370 XM56_17370 XM56_17370 3890533 3893619 - multidrug transporter AcrB gene gene3474 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17370 XM56_17375 XM56_17375 XM56_17375 3893619 3894701 - membrane protein gene gene3475 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17375 XM56_17380 XM56_17380 XM56_17380 3895061 3896344 - arginine deiminase gene gene3476 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17380 XM56_17385 XM56_17385 XM56_17385 3896360 3897868 - amino acid APC transporter gene gene3477 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17385 XM56_17390 XM56_17390 XM56_17390 3899125 3900369 - O-antigen biosynthesis protein gene gene3478 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17390 XM56_17395 XM56_17395 XM56_17395 3900435 3901592 - lipopolysaccharide biosynthesis protein gene gene3479 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17395 XM56_17400 XM56_17400 XM56_17400 3901948 3903528 - autoinducer kinase gene gene3480 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17400 XM56_17405 XM56_17405 XM56_17405 3903869 3904861 - transcriptional regulator LsrR regulates the transcription of lsr genes%3B involved in autoinducer 2 uptake%2C biofilm formation and stress responses gene gene3481 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17405 XM56_17410 XM56_17410 XM56_17410 3905082 3906647 + ABC transporter ATP-binding protein with LsrCDB is involved in the transport of autoindiuce 2 gene gene3482 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17410 XM56_17415 XM56_17415 XM56_17415 3906641 3907738 + ABC transporter permease with LsrADB is involved in the transport of autoindiuce 2 gene gene3483 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17415 XM56_17420 XM56_17420 XM56_17420 3907735 3908730 + autoinducer 2 import system permease LsrD with IsrABC is involved with autoinducer 2 import gene gene3484 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17420 XM56_17425 XM56_17425 XM56_17425 3908787 3909821 + autoinducer 2-binding protein lsrB with lsrACD is involved in the transport of autoinducer 2 into the cell gene gene3485 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17425 XM56_17430 XM56_17430 XM56_17430 3909877 3910752 + autoinducer 2 aldolase involved in autoinducer 2 transport and processing gene gene3486 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17430 XM56_17435 XM56_17435 XM56_17435 3910814 3911104 + autoinducer-2 (AI-2) modifying protein LsrG gene gene3487 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17435 XM56_17440 XM56_17440 XM56_17440 3911110 3911442 + hypothetical protein gene gene3488 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17440 XM56_17445 XM56_17445 XM56_17445 3911567 3912049 + endopeptidase gene gene3489 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17445 XM56_17450 XM56_17450 XM56_17450 3912213 3913415 + transposase gene gene3490 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17450 XM56_17455 XM56_17455 XM56_17455 3913789 3914091 + hypothetical protein gene gene3491 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17455 XM56_17460 XM56_17460 XM56_17460 3914114 3914878 - restriction endonuclease gene gene3492 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17460 XM56_17465 XM56_17465 XM56_17465 3915023 3916330 - allantoin permease gene gene3493 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17465 XM56_17470 XM56_17470 XM56_17470 3916730 3918085 - hypothetical protein gene gene3494 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17470 XM56_17475 XM56_17475 XM56_17475 3918230 3919537 - allantoin permease gene gene3495 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17475 XM56_17480 XM56_17480 XM56_17480 3919590 3920279 - LuxR family transcriptional regulator gene gene3496 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17480 XM56_17485 XM56_17485 XM56_17485 3920305 3920715 - acetyltransferase gene gene3497 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17485 XM56_17490 XM56_17490 DNA helicase DNA helicase 3921159 3922919 - disrupted pseudogene gene3498 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17490 XM56_17495 XM56_17495 XM56_17495 3923028 3924536 + transposase gene gene3499 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17495 XM56_17500 XM56_17500 XM56_17500 3924523 3925248 + ATPase gene gene3500 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17500 XM56_17505 XM56_17505 XM56_17505 3925544 3926029 - integrase gene gene3501 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17505 XM56_17510 XM56_17510 hypothetical protein hypothetical protein 3926153 3926341 - disrupted pseudogene gene3502 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17510 XM56_17515 XM56_17515 XM56_17515 3926497 3926760 - hypothetical protein gene gene3503 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17515 XM56_17520 XM56_17520 XM56_17520 3926984 3927772 - transcriptional regulator gene gene3504 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17520 XM56_17525 XM56_17525 XM56_17525 3927891 3928166 - plasmid stabilization system protein gene gene3505 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17525 XM56_17530 XM56_17530 XM56_17530 3928170 3928418 - transcriptional regulator gene gene3506 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17530 XM56_17535 XM56_17535 restriction methylase restriction methylase 3928495 3928824 - disrupted pseudogene gene3507 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17535 XM56_17540 XM56_17540 XM56_17540 3929470 3929554 - tRNA-Leu tRNA gene3508 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17540 XM56_17545 XM56_17545 XM56_17545 3929656 3930726 - lipopolysaccharide ABC transporter permease with LptABCF is involved in the transport of lipopolysaccharides gene gene3509 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17545 XM56_17550 XM56_17550 XM56_17550 3930726 3931820 - lipopolysaccharide ABC transporter permease with LptBGC is involved in lipopolysaccharide export gene gene3510 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17550 XM56_17555 XM56_17555 XM56_17555 3932100 3933611 + multifunctional aminopeptidase A catalyzes the removal of N-terminal amino acids preferably from various peptides%3B a cyteinylglycinase%2C transcription regulator and site-specific recombination factor gene gene3511 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17555 XM56_17560 XM56_17560 XM56_17560 3933861 3934310 + DNA polymerase III subunit chi binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB gene gene3512 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17560 XM56_17565 XM56_17565 XM56_17565 3934324 3937221 + valyl-tRNA synthase gene gene3513 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17565 XM56_17570 XM56_17570 XM56_17570 3937554 3938057 + acetyltransferase gene gene3514 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17570 XM56_17575 XM56_17575 XM56_17575 3938447 3939466 - transposase gene gene3515 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17575 XM56_17580 XM56_17580 XM56_17580 3939880 3940311 - regulator gene gene3516 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17580 XM56_17585 XM56_17585 XM56_17585 3940482 3941489 + ornithine carbamoyltransferase catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway gene gene3517 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17585 XM56_17590 XM56_17590 XM56_17590 3941642 3942100 - toxin-antitoxin biofilm protein TabA gene gene3518 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17590 XM56_17595 XM56_17595 XM56_17595 3942653 3944221 + ABC transporter substrate-binding protein gene gene3519 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17595 XM56_17600 XM56_17600 XM56_17600 3944384 3945433 + peptide ABC transporter permease gene gene3520 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17600 XM56_17605 XM56_17605 XM56_17605 3945435 3946274 + peptide ABC transporter permease gene gene3521 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17605 XM56_17610 XM56_17610 XM56_17610 3946267 3947145 + peptide ABC transporter ATP-binding protein gene gene3522 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17610 XM56_17615 XM56_17615 XM56_17615 3947132 3947848 + peptide ABC transporter ATP-binding protein gene gene3523 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17615 XM56_17620 XM56_17620 XM56_17620 3948385 3948576 + hypothetical protein gene gene3524 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17620 XM56_17625 XM56_17625 XM56_17625 3948860 3950998 + ribonucleoside-triphosphate reductase Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates gene gene3525 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17625 XM56_17630 XM56_17630 XM56_17630 3951178 3951642 + ribonucleoside-triphosphate reductase activates anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions gene gene3526 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17630 XM56_17635 XM56_17635 XM56_17635 3951790 3953526 - Heme/hemopexin utilization protein B precursor gene gene3527 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17635 XM56_17640 XM56_17640 XM56_17640 3953635 3954738 - hypothetical protein gene gene3528 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17640 XM56_17645 XM56_17645 XM56_17645 3955123 3955848 + phosphonate metabolism transcriptional regulator PhnF may be involved in phosphonate uptake and biodegradation gene gene3529 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17645 XM56_17650 XM56_17650 XM56_17650 3955849 3956325 + phosphonate C-P lyase gene gene3530 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17650 XM56_17655 XM56_17655 phnH phnH 3956325 3956906 + carbon-phosphorus lyase complex subunit gene gene3531 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17655 XM56_17660 XM56_17660 XM56_17660 3956906 3958018 + carbon-phosphorus lyase complex subunit PhnI required for the use of phosphonate and phosphite gene gene3532 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17660 XM56_17665 XM56_17665 XM56_17665 3958011 3958877 + carbon-phosphorus lyase complex subunit PhnJ required for use of phosphonate and phosphite gene gene3533 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17665 XM56_17670 XM56_17670 phnK phnK 3958874 3959680 + phosphonate C-P lyase system protein PhnK gene gene3534 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17670 XM56_17675 XM56_17675 XM56_17675 3959694 3960428 + phosphonate ABC transporter ATP-binding protein gene gene3535 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17675 XM56_17680 XM56_17680 XM56_17680 3960425 3961573 + phosphonate metabolism protein PhnM gene gene3536 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17680 XM56_17685 XM56_17685 XM56_17685 3961573 3962151 + ribose-phosphate pyrophosphokinase gene gene3537 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17685 XM56_17690 XM56_17690 phnP phnP 3962142 3962909 + carbon-phosphorus lyase complex accessory protein required for the use of phosphonates and phosphite as phosphorus sources gene gene3538 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17690 XM56_17695 XM56_17695 XM56_17695 3962910 3963539 - hypothetical protein gene gene3539 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17695 XM56_17700 XM56_17700 XM56_17700 3963615 3963902 - RelE-like toxin protein gene gene3540 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17700 XM56_17705 XM56_17705 XM56_17705 3963899 3964150 - antitoxin gene gene3541 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17705 XM56_17710 XM56_17710 XM56_17710 3964358 3964810 - hypothetical protein gene gene3542 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17710 XM56_17715 XM56_17715 XM56_17715 3964884 3966050 - alginate lyase gene gene3543 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17715 XM56_17720 XM56_17720 XM56_17720 3966064 3967179 - sugar ABC transporter ATP-binding protein gene gene3544 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17720 XM56_17725 XM56_17725 XM56_17725 3967191 3968030 - sugar ABC transporter permease gene gene3545 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17725 XM56_17730 XM56_17730 XM56_17730 3968049 3968933 - sugar ABC transporter permease gene gene3546 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17730 XM56_17735 XM56_17735 XM56_17735 3968941 3970254 - sugar ABC transporter substrate-binding protein gene gene3547 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17735 XM56_17740 XM56_17740 XM56_17740 3970822 3972054 + alginate lyase gene gene3548 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17740 XM56_17745 XM56_17745 XM56_17745 3972078 3974102 + alginate lyase gene gene3549 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17745 XM56_17750 XM56_17750 XM56_17750 3975247 3977412 + ornithine decarboxylase gene gene3550 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17750 XM56_17755 XM56_17755 potE potE 3977506 3978822 + putrescine transporter catalyzes the uptake of putrescine via a proton symport mechanism%2C as well as the efflux of putrescine by a putrescine/ornithine antiport system gene gene3551 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17755 XM56_17760 XM56_17760 XM56_17760 3978959 3979252 + GIY-YIG nuclease gene gene3552 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17760 XM56_17765 XM56_17765 XM56_17765 3979239 3979742 - acetyltransferase gene gene3553 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17765 XM56_17770 XM56_17770 XM56_17770 3979736 3980257 - SCP-2 sterol transfer family protein gene gene3554 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17770 XM56_17775 XM56_17775 XM56_17775 3980632 3981627 + protease gene gene3555 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17775 XM56_17780 XM56_17780 XM56_17780 3981639 3982517 + protease gene gene3556 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17780 XM56_17785 XM56_17785 XM56_17785 3982870 3984186 - membrane protein gene gene3557 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17785 XM56_17790 XM56_17790 XM56_17790 3984236 3985561 - hypothetical protein gene gene3558 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17790 XM56_17795 XM56_17795 XM56_17795 3986156 3987370 - transporter gene gene3559 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17795 XM56_17800 XM56_17800 XM56_17800 3987836 3988858 + hypothetical protein gene gene3560 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17800 XM56_17805 XM56_17805 XM56_17805 3989276 3989548 - hypothetical protein gene gene3561 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17805 XM56_17810 XM56_17810 XM56_17810 3989932 3991905 - DEAD/DEAH box helicase participates in the assembly of the large subunit of the ribosome%3B plays a key role in optimal cell growth at low temperature and is required for normal cell division gene gene3562 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17810 XM56_17815 XM56_17815 XM56_17815 3992091 3992975 - lipoprotein NlpI lipoprotein that appears to be involved in cell division%3B interacts with the periplasmic protease Prc and may be activated by protease processing gene gene3563 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17815 XM56_17820 XM56_17820 XM56_17820 3993098 3995218 - polynucleotide phosphorylase/polyadenylase gene gene3564 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17820 XM56_17825 XM56_17825 XM56_17825 3995478 3995747 - 30S ribosomal protein S15 gene gene3565 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17825 XM56_17830 XM56_17830 truB truB 3995869 3996858 - tRNA pseudouridine synthase B catalyzes isomerization of specific uridines in RNA to pseudouridine%3B responsible for residues in T loops of many tRNAs gene gene3566 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17830 XM56_17835 XM56_17835 rbfA rbfA 3996858 3997268 - ribosome-binding factor A associates with free 30S ribosomal subunits%3B essential for efficient processing of 16S rRNA%3B in Escherichia coli rbfA is induced by cold shock gene gene3567 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17835 XM56_17840 XM56_17840 infB infB 3997335 4000013 - translation initiation factor IF-2 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex gene gene3568 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17840 XM56_17845 XM56_17845 nusA nusA 4000038 4001525 - transcription elongation factor NusA modifies transcription through interactions with RNA polymerase affecting elongation%2C readthrough%2C termination%2C and antitermination gene gene3569 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17845 XM56_17850 XM56_17850 XM56_17850 4001547 4001999 - ribosome maturation protein RimP required for the maturation of the 30S ribosomal subunits gene gene3570 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17850 XM56_17855 XM56_17855 XM56_17855 4002215 4002291 - tRNA-Met tRNA gene3571 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17855 XM56_17860 XM56_17860 XM56_17860 4002352 4002438 - tRNA-Leu tRNA gene3572 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17860 XM56_17865 XM56_17865 secG secG 4002530 4002865 - preprotein translocase subunit SecG gene gene3573 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17865 XM56_17870 XM56_17870 glmM glmM 4003089 4004429 - phosphoglucosamine mutase catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate gene gene3574 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17870 XM56_17875 XM56_17875 folP folP 4004439 4005272 - dihydropteroate synthase catalyzes the formation of dihydropteroate from 2-amino-4-hydroxy-6-hydroxymethyl-7%2C8-dihydropteridine diphosphate and 4-aminobenzoate gene gene3575 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17875 XM56_17880 XM56_17880 hflB hflB 4005588 4007522 - ATP-dependent metalloprotease inner membrane metalloprotease%3B may be involved in degradation of aberrant cytoplasmic and membrane proteins gene gene3576 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17880 XM56_17885 XM56_17885 rrmJ rrmJ 4007579 4008208 - 23S rRNA methyltransferase Specifically methylates the uridine in position 2552 of 23S rRNA in the fully assembled 50S ribosomal subunit gene gene3577 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17885 XM56_17890 XM56_17890 XM56_17890 4008355 4008648 + RNA-binding protein YhbY RNA binding protein found associated to pre-50S subunit of the ribosome%3B putative role in ribosome assembly%3B necessary for optimal growth but not cell viability gene gene3578 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17890 XM56_17895 XM56_17895 greA greA 4008776 4009252 - transcription elongation factor GreA necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites%3B arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through%2C resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus gene gene3579 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17895 XM56_17900 XM56_17900 XM56_17900 4009512 4010960 + D-alanyl-D-alanine carboxypeptidase penicillin binding protein 4%3B penicillin sensitive%3B catalyzes the formation of D-alanine from D-alanyl-D-alanine%3B one of four%2C DD-carboxypeptidase low-molecular weight penicillin-binding proteins that remove terminal D-alanine from pentapeptide side chains gene gene3580 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17900 XM56_17905 XM56_17905 XM56_17905 4010966 4011625 + XRE family transcriptional regulator gene gene3581 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17905 XM56_17910 XM56_17910 XM56_17910 4011625 4012686 + sensor protein BasS/PmrB gene gene3582 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17910 XM56_17915 XM56_17915 obgE obgE 4012790 4013962 - GTPase CgtA ObgE%3B essential GTPase%3B exhibits high exchange rate for GTP/GDP%3B associates with 50S ribosomal subunit%3B involved in regulation of chromosomal replication gene gene3583 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17915 XM56_17920 XM56_17920 XM56_17920 4013994 4014953 - membrane protein gene gene3584 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17920 XM56_17925 XM56_17925 rpmA rpmA 4015040 4015297 - 50S ribosomal protein L27 involved in the peptidyltransferase reaction during translation gene gene3585 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17925 XM56_17930 XM56_17930 rplU rplU 4015317 4015628 - 50S ribosomal protein L21 gene gene3586 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17930 XM56_17935 XM56_17935 XM56_17935 4015888 4016859 + octaprenyl diphosphate synthase gene gene3587 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17935 XM56_17940 XM56_17940 XM56_17940 4016919 4017266 - DNA-binding protein gene gene3588 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17940 XM56_17945 XM56_17945 XM56_17945 4017450 4017725 + DNA-binding protein gene gene3589 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17945 XM56_17950 XM56_17950 XM56_17950 4017799 4018734 - malate dehydrogenase oxidizes malate to oxaloacetate gene gene3590 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17950 XM56_17955 XM56_17955 XM56_17955 4019198 4019668 + arginine repressor regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes gene gene3591 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17955 XM56_17960 XM56_17960 XM56_17960 4020081 4020344 + hypothetical protein gene gene3592 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17960 XM56_17965 XM56_17965 XM56_17965 4020598 4021983 - UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase ligates L-alanyl-gamma-D-glutamyl-meso-diaminopimelate to UDP-N-acetylmuramic acid for reincorporation into peptidoglycan gene gene3593 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17965 XM56_17970 XM56_17970 XM56_17970 4022153 4023166 + fructose 1%2C6-bisphosphatase catalyzes the formation of D-fructose 6-phosphate from fructose-1%2C6-bisphosphate gene gene3594 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17970 XM56_17975 XM56_17975 XM56_17975 4023363 4024943 - chemotaxis protein gene gene3595 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17975 XM56_17980 XM56_17980 XM56_17980 4025233 4025760 + inorganic pyrophosphatase catalyzes the hydrolysis of pyrophosphate to phosphate gene gene3596 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17980 XM56_17985 XM56_17985 XM56_17985 4026057 4026419 - gamma-glutamylcyclotransferase gene gene3597 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17985 XM56_17990 XM56_17990 XM56_17990 4026422 4030306 - translocation and assembly module TamB gene gene3598 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17990 XM56_17995 XM56_17995 XM56_17995 4030303 4032039 - membrane protein gene gene3599 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_17995 XM56_18000 XM56_18000 XM56_18000 4032479 4033120 + methionine sulfoxide reductase A this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form%3B provides protection against oxidative stress gene gene3600 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18000 XM56_18005 XM56_18005 XM56_18005 4033287 4034618 + membrane protein gene gene3601 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18005 XM56_18010 XM56_18010 XM56_18010 4034697 4034900 - hypothetical protein gene gene3602 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18010 XM56_18015 XM56_18015 XM56_18015 4035224 4035787 + hypothetical protein gene gene3603 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18015 XM56_18020 XM56_18020 XM56_18020 4035790 4036530 - adenosine-3'(2')%2C5'-bisphosphate nucleotidase catalyzes the formation of AMP from adenosine-3'%2C5'-bisphosphate gene gene3604 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18020 XM56_18025 XM56_18025 cpdB cpdB 4037009 4038982 + 2'%2C 3'-cyclic nucleotide 2'-phosphodiesterase periplasmic enzyme%3B functions during ribonucleic acid degradation%3B 2'%2C3'-cyclic nucleotides are first converted to 3'-nucleotide and then cleaved to yield a ribonucleotide and a phosphate gene gene3605 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18025 XM56_18030 XM56_18030 XM56_18030 4039110 4039775 + iron-sulfur cluster repair di-iron protein Involved in anaerobic NO protection and iron metabolism gene gene3606 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18030 XM56_18035 XM56_18035 XM56_18035 4039860 4040480 - peptidylprolyl isomerase FKBP-type%3B rotamase%3B catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides gene gene3607 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18035 XM56_18040 XM56_18040 XM56_18040 4040854 4041528 + lysine transporter LysM gene gene3608 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18040 XM56_18045 XM56_18045 XM56_18045 4041670 4042122 + hypothetical protein gene gene3609 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18045 XM56_18050 XM56_18050 rplI rplI 4042198 4042650 - 50S ribosomal protein L9 in Escherichia coli this protein is wrapped around the base of the L1 stalk gene gene3610 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18050 XM56_18055 XM56_18055 rpsR rpsR 4042690 4042917 - 30S ribosomal protein S18 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA%3B helps stabilize the platform of the 30S subunit gene gene3611 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18055 XM56_18060 XM56_18060 XM56_18060 4042922 4043239 - primosomal replication protein N binds single-stranded DNA at the primosome assembly site gene gene3612 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18060 XM56_18065 XM56_18065 rpsF rpsF 4043248 4043640 - 30S ribosomal protein S6 binds cooperatively with S18 to the S15-16S complex%2C allowing platform assembly to continue with S11 and S21 gene gene3613 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18065 XM56_18070 XM56_18070 XM56_18070 4044175 4044450 + hypothetical protein gene gene3614 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18070 XM56_18075 XM56_18075 XM56_18075 4044571 4045320 - esterase YjfP%3B esterase activity towards palmitoyl-CoA and pNP-butyrate in vitro%3B unknown function and substrate in vivo gene gene3615 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18075 XM56_18080 XM56_18080 XM56_18080 4045506 4045814 + biofilm stress and motility protein A in Escherichia coli%2C mutation of this gene affects biofilm maturation%2C stress response%2C and motility gene gene3616 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18080 XM56_18085 XM56_18085 XM56_18085 4045839 4047482 - isovaleryl-CoA dehydrogenase catalyzes the formation of 3-methylcrotonyl-CoA from isovaleryl-CoA gene gene3617 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18085 XM56_18090 XM56_18090 XM56_18090 4047815 4048555 - 23S rRNA methyltransferase Specifically methylates the ribose of guanosine 2251 in 23S rRNA gene gene3618 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18090 XM56_18095 XM56_18095 XM56_18095 4048753 4051305 - exoribonuclease R 3'-5'exoribonuclease that acts nonspecifically on poly(A)%2C poly(U) and ribosomal RNAs gene gene3619 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18095 XM56_18100 XM56_18100 XM56_18100 4051359 4051784 - transcriptional repressor NsrR negatively regulates the transcription of genes upregulated by nitrosative stress gene gene3620 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18100 XM56_18105 XM56_18105 XM56_18105 4052210 4053508 - adenylosuccinate synthetase catalyzes the formation of N6-(1%2C2%2C-dicarboxyethyl)-AMP from L-aspartate%2C inosine monophosphate and GTP in AMP biosynthesis gene gene3621 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18105 XM56_18110 XM56_18110 XM56_18110 4053608 4053808 - membrane protein gene gene3622 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18110 XM56_18115 XM56_18115 XM56_18115 4053908 4054912 - cell division protein FtsH with HflK inhibits proteolysis of lambda cII protein by FtsH gene gene3623 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18115 XM56_18120 XM56_18120 XM56_18120 4054916 4056199 - cell division protein FtsH with HflC inhibits proteolysis of lambda cII protein by FtsH gene gene3624 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18120 XM56_18125 XM56_18125 XM56_18125 4056297 4057598 - GTPase HflX involved in modulation of proteins HflK and HflC%3B part of the hflA locus (high frequency of lysogenization) which governs the lysis-lysogeny decision of bacteriophage lambda by controlling stability of the phage cII protein gene gene3625 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18125 XM56_18130 XM56_18130 hfq hfq 4057697 4058002 - RNA-binding protein Hfq HF-I%2C host factor for RNA phage Q beta replication gene gene3626 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18130 XM56_18135 XM56_18135 miaA miaA 4058119 4059060 - tRNA delta(2)-isopentenylpyrophosphate transferase IPP transferase%3B isopentenyltransferase%3B involved in tRNA modification%3B in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil%3B further tRNA modifications may occur%3B mutations in miaA result in defects in translation efficiency and fidelity gene gene3627 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18135 XM56_18140 XM56_18140 XM56_18140 4059053 4060960 - DNA mismatch repair protein gene gene3628 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18140 XM56_18145 XM56_18145 XM56_18145 4060976 4062841 - N-acetylmuramoyl-L-alanine amidase gene gene3629 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18145 XM56_18150 XM56_18150 XM56_18150 4062921 4063391 - ADP-binding protein needed for nucleoid integrity%3B possibly involved in cell wall synthesis gene gene3630 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18150 XM56_18155 XM56_18155 XM56_18155 4063402 4064916 - carbohydrate kinase gene gene3631 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18155 XM56_18160 XM56_18160 XM56_18160 4064915 4066069 + [Fe-S]-binding protein gene gene3632 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18160 XM56_18165 XM56_18165 XM56_18165 4066412 4066487 - tRNA-Gly tRNA gene3633 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18165 XM56_18170 XM56_18170 XM56_18170 4066797 4067342 - oligoribonuclease 3'-5' exoribonuclease specific for small oligoribonuclotides gene gene3634 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18170 XM56_18175 XM56_18175 XM56_18175 4067520 4068572 + GTPase RsgA EngC%3B RsgA%3B CpgA%3B circularly permuted GTPase%3B ribosome small subunit-dependent GTPase A%3B has the pattern G4-G1-G3 as opposed to other GTPases%3B interacts strongly with 30S ribosome which stimulates GTPase activity gene gene3635 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18175 XM56_18180 XM56_18180 XM56_18180 4068681 4069562 + phosphatidylserine decarboxylase gene gene3636 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18180 XM56_18185 XM56_18185 XM56_18185 4069603 4072962 + mechanosensitive channel protein gene gene3637 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18185 XM56_18190 XM56_18190 XM56_18190 4073104 4074081 - poxB regulator PoxA poxA%3B regulates pyruvate oxidase poxB gene gene3638 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18190 XM56_18195 XM56_18195 XM56_18195 4074659 4076482 + fumarate reductase part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration%3B FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit%2C respectively%3B FrdCD are the membrane components which interact with quinone and are involved in electron transfer%3B the catalytic subunits are similar to succinate dehydrogenase SdhAB gene gene3639 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18195 XM56_18200 XM56_18200 XM56_18200 4076475 4077209 + fumarate reductase part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration%3B FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit%2C respectively%3B FrdCD are the membrane components which interact with quinone and are involved in electron transfer%3B the catalytic subunits are similar to succinate dehydrogenase SdhAB gene gene3640 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18200 XM56_18205 XM56_18205 XM56_18205 4077226 4077618 + fumarate reductase part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration%3B FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit%2C respectively%3B FrdCD are the membrane components which interact with quinone and are involved in electron transfer%3B the catalytic subunits are similar to succinate dehydrogenase SdhAB gene gene3641 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18205 XM56_18210 XM56_18210 XM56_18210 4077635 4077991 + fumarate reductase gene gene3642 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18210 XM56_18215 XM56_18215 XM56_18215 4078141 4078680 + membrane protein lipocalin%3B globomycin-sensitive outer membrane lipoprotein gene gene3643 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18215 XM56_18220 XM56_18220 XM56_18220 4078682 4078996 - multidrug transporter member of the SMR family of proton-dependent drug efflux transporters%3B quaternary ammonium compound efflux pump%3B confers resistance to cetylpyridinium%2C cetyldimethylethyl ammonium and cetrimide cations gene gene3644 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18220 XM56_18225 XM56_18225 XM56_18225 4079175 4079306 - ECN family pore-forming entericidin gene gene3645 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18225 XM56_18230 XM56_18230 XM56_18230 4079492 4080058 - elongation factor P gene gene3646 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18230 XM56_18235 XM56_18235 XM56_18235 4080094 4081125 + lysine 2%2C3-aminomutase gene gene3647 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18235 XM56_18240 XM56_18240 XM56_18240 4081182 4081520 - membrane protein gene gene3648 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18240 XM56_18245 XM56_18245 hypothetical protein hypothetical protein 4081638 4081866 + disrupted pseudogene gene3649 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18245 XM56_18250 XM56_18250 groEL groEL 4081905 4083557 - molecular chaperone GroEL 60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds%3B many bacteria have multiple copies of the groEL gene which are active under different environmental conditions%3B the B.japonicum protein in this cluster is expressed constitutively%3B in Rhodobacter%2C Corynebacterium and Rhizobium this protein is essential for growth gene gene3650 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18250 XM56_18255 XM56_18255 groES groES 4083614 4083907 - molecular chaperone GroES 10 kDa chaperonin%3B Cpn10%3B GroES%3B forms homoheptameric ring%3B binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it%3B folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES%3B release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring gene gene3651 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18255 XM56_18260 XM56_18260 XM56_18260 4084160 4084687 - exclusion suppressor FxsA gene gene3652 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18260 XM56_18265 XM56_18265 aspA aspA 4085129 4086565 + aspartate ammonia-lyase catalyzes the formation of fumarate from aspartate gene gene3653 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18265 XM56_18270 XM56_18270 XM56_18270 4086685 4087986 + C4-dicarboxylate transporter functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate%3B similar to dcuB gene gene3654 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18270 XM56_18275 XM56_18275 XM56_18275 4088143 4088481 + cation tolerance protein CutA copper binding protein required for copper tolerance%3B involved in resistance toward heavy metals gene gene3655 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18275 XM56_18280 XM56_18280 dipZ dipZ 4088457 4090220 + thiol:disulfide interchange protein precursor two electrons are transferred from cytoplasmic NADPH to thioredoxin and then to the inner membrane protein DsbD which keeps the disulfide isomerase DsbC in a reduced state in the oxidizing periplasm%3B DsbC in turns rearranges incorrectly made disulfide bonds in the periplasm gene gene3656 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18280 XM56_18285 XM56_18285 XM56_18285 4090268 4091431 - glycerate kinase gene gene3657 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18285 XM56_18290 XM56_18290 XM56_18290 4091743 4092318 + transcriptional regulator gene gene3658 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18290 XM56_18295 XM56_18295 XM56_18295 4092462 4092537 + tRNA-Phe tRNA gene3659 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18295 XM56_18300 XM56_18300 XM56_18300 4092643 4094937 - pyruvate formate-lyase formate acetyltransferase%3B catalyzes the formation of formate and acetyl-CoA from pyruvate gene gene3660 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18300 XM56_18305 XM56_18305 XM56_18305 4094988 4096208 - propionate kinase catalyzes the formation of propanoyl phosphate from propanoate and ATP%3B TdcD also has acetate kinase activities and functions in anaerobic threonine catabolism gene gene3661 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18305 XM56_18310 XM56_18310 XM56_18310 4096263 4097591 - septum site-determining protein gene gene3662 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18310 XM56_18315 XM56_18315 XM56_18315 4097616 4098608 - threonine dehydratase catalyzes the formation of 2-oxobutanoate from L-threonine%3B catabolic gene gene3663 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18315 XM56_18320 XM56_18320 XM56_18320 4099246 4100559 + coproporphyrinogen III oxidase catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III gene gene3664 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18320 XM56_18325 XM56_18325 XM56_18325 4100556 4101101 + ShuX gene gene3665 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18325 XM56_18330 XM56_18330 XM56_18330 4101098 4101748 + hypothetical protein gene gene3666 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18330 XM56_18335 XM56_18335 XM56_18335 4101780 4102025 + hemin transporter gene gene3667 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18335 XM56_18340 XM56_18340 XM56_18340 4102198 4104261 + ligand-gated channel protein gene gene3668 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18340 XM56_18345 XM56_18345 XM56_18345 4104378 4105415 + hemin transporter gene gene3669 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18345 XM56_18350 XM56_18350 XM56_18350 4105412 4106251 + hemin ABC transporter substrate-binding protein gene gene3670 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18350 XM56_18355 XM56_18355 XM56_18355 4106248 4107252 + iron ABC transporter gene gene3671 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18355 XM56_18360 XM56_18360 hmuV hmuV 4107245 4108030 + hemin importer ATP-binding subunit with HmuTU is involved in the transport of hemin gene gene3672 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18360 XM56_18365 XM56_18365 XM56_18365 4108210 4109661 - GntR family transcriptional regulator gene gene3673 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18365 XM56_18370 XM56_18370 XM56_18370 4110135 4112267 - ferrioxamine B receptor gene gene3674 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18370 XM56_18375 XM56_18375 XM56_18375 4112686 4115022 + mechanosensitive ion channel protein gene gene3675 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18375 XM56_18380 XM56_18380 XM56_18380 4115046 4115300 - toxin YoeB gene gene3676 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18380 XM56_18385 XM56_18385 XM56_18385 4115297 4115548 - antitoxin YefM Antitoxin that counteracts the effect of the YoeB toxin gene gene3677 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18385 XM56_18390 XM56_18390 XM56_18390 4115679 4118465 - peptidase M16 gene gene3678 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18390 XM56_18395 XM56_18395 XM56_18395 4118450 4120156 - membrane protein gene gene3679 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18395 XM56_18400 XM56_18400 XM56_18400 4120285 4123056 - TonB-dependent receptor gene gene3680 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18400 XM56_18405 XM56_18405 XM56_18405 4123162 4124130 - histidine kinase gene gene3681 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18405 XM56_18410 XM56_18410 XM56_18410 4124120 4124662 - RNA polymerase sigma factor gene gene3682 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18410 XM56_18415 XM56_18415 XM56_18415 4125118 4125837 + ferrichrome ABC transporter substrate-binding protein gene gene3683 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18415 XM56_18420 XM56_18420 XM56_18420 4125942 4126226 - hypothetical protein gene gene3684 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18420 XM56_18425 XM56_18425 XM56_18425 4126223 4127437 - hypothetical protein gene gene3685 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18425 XM56_18430 XM56_18430 XM56_18430 4127624 4128700 - secretion system apparatus protein SsaU gene gene3686 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18430 XM56_18435 XM56_18435 XM56_18435 4128690 4129484 - type III secretion protein gene gene3687 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18435 XM56_18440 XM56_18440 XM56_18440 4129486 4129755 - type III secretion system protein SsaS gene gene3688 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18440 XM56_18445 XM56_18445 ssaR ssaR 4129778 4130428 - type III secretion system protein SsaR part of a set of proteins involved in the infection of eukaryotic cells%3B in plant pathogens involved in the hypersensitivity response gene gene3689 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18445 XM56_18450 XM56_18450 XM56_18450 4130545 4131495 - type III secretion protein SsaQ gene gene3690 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18450 XM56_18455 XM56_18455 XM56_18455 4131473 4131871 - hypothetical protein gene gene3691 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18455 XM56_18460 XM56_18460 XM56_18460 4131852 4132226 - type III secretion protein gene gene3692 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18460 XM56_18465 XM56_18465 XM56_18465 4132235 4133590 - type III secretion protein ATPase gene gene3693 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18465 XM56_18470 XM56_18470 XM56_18470 4133577 4135616 - secretion system apparatus protein SsaV with SsaC forms part of a protein export system across the inner and outer cell membranes%3B part of the Salmonella pathogenicity island 2%3B part of the type III secretion system gene gene3694 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18470 XM56_18475 XM56_18475 XM56_18475 4135613 4135984 - type III secretion system protein gene gene3695 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18475 XM56_18480 XM56_18480 XM56_18480 4136093 4137106 - type III secretion system protein gene gene3696 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18480 XM56_18485 XM56_18485 XM56_18485 4137126 4137749 - type III secretion protein HrpE gene gene3697 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18485 XM56_18490 XM56_18490 XM56_18490 4137746 4138339 - hypothetical protein gene gene3698 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18490 XM56_18495 XM56_18495 XM56_18495 4138356 4139087 - type III secretion protein SsaJ gene gene3699 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18495 XM56_18500 XM56_18500 XM56_18500 4139084 4139332 - ATP-dependent helicase HrpB gene gene3700 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18500 XM56_18505 XM56_18505 XM56_18505 4139377 4139652 - type III secretion system protein%2C SsaH family gene gene3701 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18505 XM56_18510 XM56_18510 XM56_18510 4139649 4139864 - type III secretion system needle protein SsaG Salmonella pathogenicity island 2 protein%3B member of a type III secretion system involved in the survival and replication of Salmonella in a host cell gene gene3702 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18510 XM56_18515 XM56_18515 XM56_18515 4139873 4140580 - AraC family transcriptional regulator gene gene3703 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18515 XM56_18520 XM56_18520 XM56_18520 4140674 4141486 - hypothetical protein gene gene3704 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18520 XM56_18525 XM56_18525 XM56_18525 4141538 4142050 - hypothetical protein gene gene3705 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18525 XM56_18530 XM56_18530 XM56_18530 4142031 4142441 - pathogenicity island 2 effector protein SseE gene gene3706 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18530 XM56_18535 XM56_18535 XM56_18535 4142445 4143035 - chemotaxis protein gene gene3707 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18535 XM56_18540 XM56_18540 XM56_18540 4143046 4144506 - pathogenicity island 2 effector protein SseC gene gene3708 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18540 XM56_18545 XM56_18545 XM56_18545 4144508 4144966 - hypothetical protein gene gene3709 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18545 XM56_18550 XM56_18550 XM56_18550 4144994 4145575 - chemotaxis protein gene gene3710 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18550 XM56_18555 XM56_18555 XM56_18555 4145631 4145906 - chromosome partitioning protein ParA gene gene3711 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18555 XM56_18560 XM56_18560 XM56_18560 4146017 4146232 - type III secretion system protein%2C YseE family gene gene3712 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18560 XM56_18565 XM56_18565 XM56_18565 4146250 4147461 - type III secretion protein SsaD gene gene3713 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18565 XM56_18570 XM56_18570 XM56_18570 4147463 4148944 - outer membrane secretin SsaC gene gene3714 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18570 XM56_18575 XM56_18575 XM56_18575 4148941 4149375 - hypothetical protein gene gene3715 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18575 XM56_18580 XM56_18580 XM56_18580 4149563 4152343 + histidine kinase phosphorylates the response regulator SsrB%3B is involved in the expression of the virulence genes of Salmonella pathogenicity island-2 gene gene3716 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18580 XM56_18585 XM56_18585 XM56_18585 4152401 4153033 + regulator gene gene3717 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18585 XM56_18590 XM56_18590 XM56_18590 4153159 4154472 - glutamate:protein symporter gene gene3718 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18590 XM56_18595 XM56_18595 XM56_18595 4155391 4157349 + acetyl-CoA synthetase Acs%3B catalyzes the conversion of acetate and CoA to acetyl-CoA gene gene3719 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18595 XM56_18600 XM56_18600 XM56_18600 4157403 4157714 + membrane protein gene gene3720 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18600 XM56_18605 XM56_18605 actP actP 4157711 4159366 + acetate permease member of the sodium:solute symporter family%3B cotranscribed with the acs gene which encodes acetyl coenzyme A synthase%3B mutations affect acetate uptake gene gene3721 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18605 XM56_18610 XM56_18610 XM56_18610 4159563 4159678 - 5S ribosomal RNA rRNA gene3722 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18610 XM56_18615 XM56_18615 XM56_18615 4159720 4159795 - tRNA-Thr tRNA gene3723 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18615 XM56_18620 XM56_18620 XM56_18620 4159810 4159925 - 5S ribosomal RNA rRNA gene3724 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18620 XM56_18625 XM56_18625 XM56_18625 4160096 4163131 - 23S ribosomal RNA rRNA gene3725 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18625 XM56_18630 XM56_18630 XM56_18630 4163469 4163544 - tRNA-Ala tRNA gene3726 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18630 XM56_18635 XM56_18635 XM56_18635 4163655 4163731 - tRNA-Ile tRNA gene3727 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18635 XM56_18640 XM56_18640 XM56_18640 4163831 4165379 - 16S ribosomal RNA rRNA gene3728 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18640 XM56_18645 XM56_18645 purH purH 4166164 4167753 + phosphoribosylaminoimidazolecarboxamide formyltransferase involved in de novo purine biosynthesis gene gene3729 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18645 XM56_18650 XM56_18650 XM56_18650 4167779 4169074 + phosphoribosylamine--glycine ligase catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis gene gene3730 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18650 XM56_18655 XM56_18655 XM56_18655 4169186 4169839 - hypothetical protein gene gene3731 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18655 XM56_18660 XM56_18660 XM56_18660 4169892 4170167 - DNA-binding protein gene gene3732 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18660 XM56_18665 XM56_18665 XM56_18665 4170356 4170946 - hypothetical protein gene gene3733 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18665 XM56_18670 XM56_18670 XM56_18670 4170992 4171696 - endonuclease V Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA%3B cleaves DNA containing urea residues%2C AP sites%2C base mismatches%2C insertion/deletion mismatches%2C flaps%2C and pseudo-Y structures gene gene3734 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18670 XM56_18675 XM56_18675 hemE hemE 4171720 4172787 - uroporphyrinogen decarboxylase catalyzes the formation of coproporphyrinogen from uroporphyrinogen III gene gene3735 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18675 XM56_18680 XM56_18680 nudC nudC 4172868 4173653 - NADH pyrophosphatase can catalyze hydrolysis of broad range of dinucleotide pyrophosphates but prefers reduced form of NADH%3B requires divalent metal ions such as magnesium and manganese and produces two mononucleoside 5'-phosphates gene gene3736 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18680 XM56_18685 XM56_18685 XM56_18685 4173745 4174248 + regulator of sigma D gene gene3737 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18685 XM56_18690 XM56_18690 XM56_18690 4174664 4176631 + thiamine biosynthesis protein ThiC catalyzes the formation of 4-amino-2-methyl-5-phosphomethylpyrimidine from 5-amino-1-(5-phospho-D-ribosyl)imidazole and S-adenosyl-L-methionine in thiamine biosynthesis gene gene3738 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18690 XM56_18695 XM56_18695 XM56_18695 4176618 4177289 + thiamine-phosphate pyrophosphorylase catalyzes the formation of thiamine monophosphate from 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate gene gene3739 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18695 XM56_18700 XM56_18700 XM56_18700 4177282 4178082 + molybdopterin-synthase adenylyltransferase gene gene3740 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18700 XM56_18705 XM56_18705 XM56_18705 4178079 4178279 + thiamine biosynthesis protein ThiS gene gene3741 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18705 XM56_18710 XM56_18710 XM56_18710 4178281 4179069 + thiazole synthase gene gene3742 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18710 XM56_18715 XM56_18715 thiH thiH 4179062 4180192 + thiamine biosynthesis protein ThiH in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and iscS%3B with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine%2C cysteine and 1-deoxy-D-xylulose-5-phosphate%3B forms a complex with ThiG%3B contains an iron-sulfur center gene gene3743 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18715 XM56_18720 XM56_18720 XM56_18720 4180614 4181633 - transposase gene gene3744 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18720 XM56_18725 XM56_18725 XM56_18725 4181845 4186065 - DNA-directed RNA polymerase subunit beta' DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter gene gene3745 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18725 XM56_18730 XM56_18730 rpoB rpoB 4186202 4190230 - DNA-directed RNA polymerase subunit beta DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates%3B beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme gene gene3746 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18730 XM56_18735 XM56_18735 rplL rplL 4190574 4190942 - 50S ribosomal protein L7/L12 present in two forms%3B L12 is normal%2C while L7 is aminoacylated at the N-terminal serine%3B the only multicopy ribosomal protein%3B 4:1 ratio of L7/L12 per ribosome%3B two L12 dimers bind L10%3B critically important for translation efficiency and fidelity%3B stimulates GTPase activity of translation factors gene gene3747 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18735 XM56_18740 XM56_18740 rplJ rplJ 4191011 4191514 - 50S ribosomal protein L10 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit gene gene3748 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18740 XM56_18745 XM56_18745 XM56_18745 4191888 4192592 - 50S ribosomal protein L1 gene gene3749 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18745 XM56_18750 XM56_18750 XM56_18750 4192596 4193024 - 50S ribosomal protein L11 gene gene3750 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18750 XM56_18755 XM56_18755 nusG nusG 4193218 4193763 - transcription antiterminator NusG Modulates Rho-dependent transcription termination gene gene3751 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18755 XM56_18760 XM56_18760 secE secE 4193765 4194148 - preprotein translocase subunit SecE forms a complex with SecY and SecG%3B SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane%2C a process driven by ATP and a proton-motive force gene gene3752 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18760 XM56_18765 XM56_18765 tuf tuf 4194388 4195572 - elongation factor Tu EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu gene gene3753 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18765 XM56_18770 XM56_18770 XM56_18770 4195681 4195756 - tRNA-Thr tRNA gene3754 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18770 XM56_18775 XM56_18775 XM56_18775 4195763 4195837 - tRNA-Gly tRNA gene3755 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18775 XM56_18780 XM56_18780 XM56_18780 4195982 4196066 - tRNA-Tyr tRNA gene3756 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18780 XM56_18785 XM56_18785 XM56_18785 4196085 4196160 - tRNA-Thr tRNA gene3757 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18785 XM56_18790 XM56_18790 XM56_18790 4196568 4197119 + histone acetyltransferase gene gene3758 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18790 XM56_18795 XM56_18795 XM56_18795 4197329 4198279 + pantothenate kinase gene gene3759 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18795 XM56_18800 XM56_18800 XM56_18800 4198319 4199278 - biotin--[acetyl-CoA-carboxylase] synthetase catalyzes the formation of biotinyl-5'-AMP%2C also acts as a transcriptional repressor of the biotin operon gene gene3760 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18800 XM56_18805 XM56_18805 murB murB 4199275 4200312 - UDP-N-acetylenolpyruvoylglucosamine reductase catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis gene gene3761 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18805 XM56_18810 XM56_18810 XM56_18810 4200673 4201230 - transposase gene gene3762 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18810 XM56_18815 XM56_18815 XM56_18815 4201386 4201649 - hypothetical protein gene gene3763 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18815 XM56_18820 XM56_18820 XM56_18820 4201854 4201969 - 5S ribosomal RNA rRNA gene3764 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18820 XM56_18825 XM56_18825 XM56_18825 4202140 4205175 - 23S ribosomal RNA rRNA gene3765 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18825 XM56_18830 XM56_18830 XM56_18830 4205546 4205621 - tRNA-Glu tRNA gene3766 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18830 XM56_18835 XM56_18835 XM56_18835 4205817 4207365 - 16S ribosomal RNA rRNA gene3767 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18835 XM56_18840 XM56_18840 XM56_18840 4207830 4208363 - protoporphyrinogen oxidase gene gene3768 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18840 XM56_18845 XM56_18845 XM56_18845 4208385 4209836 - potassium transporter gene gene3769 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18845 XM56_18850 XM56_18850 XM56_18850 4209873 4210487 - hypothetical protein gene gene3770 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18850 XM56_18855 XM56_18855 XM56_18855 4210487 4211818 - proline dipeptidase catalyzes the hydrolysis of dipeptides with a proline at the C-terminal%3B also catalyzes the low efficiency hydrolysis of organophosphate di- and tri-esters gene gene3771 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18855 XM56_18860 XM56_18860 fadB fadB 4212145 4214334 + multifunctional fatty acid oxidation complex subunit alpha includes enoyl-CoA hydratase%2C delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase%2C 3-hydroxyacyl-CoA dehydrogenase%2C and 3-hydroxybutyryl-CoA epimerase%3B catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA%3B also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities%3B forms a heterotetramer with FadA%3B similar to FadI2J2 complex%3B functions in beta-oxidation of fatty acids gene gene3772 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18860 XM56_18865 XM56_18865 fadA fadA 4214346 4215509 + 3-ketoacyl-CoA thiolase FadA%3B fatty acid oxidation complex component beta%3B functions in a heterotetramer with FadB%3B similar to FadI2J2 complex%3B functions in beta-oxidation of fatty acids gene gene3773 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18865 XM56_18870 XM56_18870 fre fre 4215609 4216310 - FMN reductase NAD(P)H-flavin reductase%3B catalyzes the reversible oxidation/reduction of NAD(P) and flavine mononucleotide%3B in Salmonella and E. coli this protein also reduces aquacob(III)alamin to cob(II)alamin gene gene3774 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18870 XM56_18875 XM56_18875 XM56_18875 4216365 4217861 - 3-octaprenyl-4-hydroxybenzoate carboxy-lyase catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol gene gene3775 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18875 XM56_18880 XM56_18880 rfaH rfaH 4218126 4218614 + transcriptional regulator gene gene3776 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18880 XM56_18885 XM56_18885 XM56_18885 4218703 4219725 - delta-aminolevulinic acid dehydratase catalyzes the formation of porphobilinogen from 5-aminolevulinate gene gene3777 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18885 XM56_18890 XM56_18890 XM56_18890 4219740 4220522 - DNase TatD magnesium dependent%3B involved in quality control of mutated Tat exported substrates%3B not involved in the Sec-independent protein export system gene gene3778 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18890 XM56_18895 XM56_18895 XM56_18895 4220578 4221357 - twin-arginine protein translocation system subunit TatC with TatABE forms the twin-arginine translocation complex which is involved in the transport of proteins across the cytoplasmic membrane gene gene3779 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18895 XM56_18900 XM56_18900 XM56_18900 4221360 4222016 - preprotein translocase subunit TatB gene gene3780 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18900 XM56_18905 XM56_18905 XM56_18905 4222020 4222286 - preprotein translocase subunit TatA gene gene3781 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18905 XM56_18910 XM56_18910 ubiB ubiB 4222487 4224118 - ubiquinone biosynthesis protein UbiB an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone%3B functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis%3B similar to eukaryotic proteins that exhibit kinase functions gene gene3782 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18910 XM56_18915 XM56_18915 XM56_18915 4224115 4224768 - membrane protein gene gene3783 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18915 XM56_18920 XM56_18920 ubiE ubiE 4224782 4225537 - ubiquinone biosynthesis methyltransferase UbiE Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone and menaquinone gene gene3784 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18920 XM56_18925 XM56_18925 XM56_18925 4225671 4227197 - DNA recombination protein RmuC YigN%3B nuclease that may cleave DNA structures arising during the recombination of short-inverted repeats and thereby prevents the inversion of the internal sequence%3B transcription is induced by DNA-damaging agents such as nalidixic acid or mitomycin C in a LexA-dependent manner gene gene3785 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18925 XM56_18930 XM56_18930 XM56_18930 4227398 4227928 - cytochrome O ubiquinol oxidase gene gene3786 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18930 XM56_18935 XM56_18935 XM56_18935 4228057 4229868 - carbon starvation protein CstA gene gene3787 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18935 XM56_18940 XM56_18940 XM56_18940 4230212 4231009 - C4-dicarboxylate ABC transporter gene gene3788 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18940 XM56_18945 XM56_18945 XM56_18945 4231257 4232276 + transposase gene gene3789 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18945 XM56_18950 XM56_18950 XM56_18950 4232733 4233494 - uridine phosphorylase catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate%3B involved in the pyrimidine salvage pathway gene gene3790 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18950 XM56_18955 XM56_18955 XM56_18955 4234135 4234989 + carboxymethylenebutenolidase gene gene3791 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18955 XM56_18960 XM56_18960 XM56_18960 4235055 4237346 - 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase gene gene3792 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18960 XM56_18965 XM56_18965 XM56_18965 4237437 4238390 + transcriptional regulator homocysteine-binding%3B positive regulator of metA%2C metE and metH gene gene3793 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18965 XM56_18970 XM56_18970 XM56_18970 4238278 4239177 - membrane protein gene gene3794 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18970 XM56_18975 XM56_18975 XM56_18975 4239333 4240292 - membrane protein gene gene3795 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18975 XM56_18980 XM56_18980 ugpQ ugpQ 4240478 4241218 - glycerophosphodiester phosphodiesterase hydrolyzes diesters during transport at the inner face of the cytoplasmic membrane to glycerol-3-phosphate and alcohol%3B induced when cells are starved for inorganic phosphate gene gene3796 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18980 XM56_18985 XM56_18985 ugpC ugpC 4241215 4242309 - glycerol-3-phosphate transporter ATP-binding subunit part of the UgpABCE glycerol-3-phosphate uptake system gene gene3797 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18985 XM56_18990 XM56_18990 XM56_18990 4242316 4243161 - glycerol-3-phosphate transporter membrane protein with UgpABC is involved in uptake of glycerol-3-phosphate gene gene3798 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18990 XM56_18995 XM56_18995 XM56_18995 4243158 4244045 - glycerol-3-phosphate transporter permease with UgpEC is involved in the uptake of glycerol-3-phosphate gene gene3799 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_18995 XM56_19000 XM56_19000 XM56_19000 4244248 4245573 - glycerol-3-phosphate ABC transporter substrate-binding protein with UgpACE is involved in the uptake of glycerol-3-phosphate gene gene3800 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19000 XM56_19005 XM56_19005 XM56_19005 4246252 4246737 + pilus assembly protein gene gene3801 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19005 XM56_19010 XM56_19010 XM56_19010 4247073 4249250 + alpha-related fimbriae usher protein gene gene3802 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19010 XM56_19015 XM56_19015 XM56_19015 4249253 4249936 + pilus assembly protein gene gene3803 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19015 XM56_19020 XM56_19020 XM56_19020 4249908 4250555 + hypothetical protein gene gene3804 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19020 XM56_19025 XM56_19025 XM56_19025 4250571 4251095 + alpha-related fimbriae minor subunit 2 gene gene3805 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19025 XM56_19030 XM56_19030 XM56_19030 4251129 4252229 + hypothetical protein gene gene3806 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19030 XM56_19035 XM56_19035 livF livF 4252303 4253004 - leucine/isoleucine/valine transporter ATP-binding subunit with LivGHMJ and LivGHMK is part of the high-affinity branched-chain amino acid transport system%3B LivFGHMK is specific for the transport of leucine%2C while LivFGHMJ is a transporter for leucine%2C isoleucine%2C and valine gene gene3807 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19035 XM56_19040 XM56_19040 livG livG 4253049 4253816 - leucine/isoleucine/valine transporter ATP-binding subunit Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids%3B LivFGHMK is specific for the transport of leucine%2C while LivFGHMJ is a transporter for leucine%2C isoleucine%2C and valine gene gene3808 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19040 XM56_19045 XM56_19045 livM livM 4253813 4255099 - leucine/isoleucine/valine transporter permease subunit Part of the ABC transporter complex LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids%3B LivFGHMK is specific for the transport of leucine%2C while LivFGHMJ is a transporter for leucine%2C isoleucine%2C and valine gene gene3809 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19045 XM56_19050 XM56_19050 XM56_19050 4255096 4256022 - branched-chain amino acid transporter permease subunit LivH LivHMGF is the membrane component of the LIV-I/LS branched-chain amino acid transporter gene gene3810 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19050 XM56_19055 XM56_19055 XM56_19055 4256181 4257296 - leucine ABC transporter substrate-binding protein with LivFGHM is involved in the high affinity leucine transport gene gene3811 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19055 XM56_19060 XM56_19060 XM56_19060 4257718 4258110 + acetyltransferase gene gene3812 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19060 XM56_19065 XM56_19065 XM56_19065 4258387 4259691 - hypothetical protein gene gene3813 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19065 XM56_19070 XM56_19070 hypothetical protein hypothetical protein 4259787 4260128 - disrupted pseudogene gene3814 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19070 XM56_19075 XM56_19075 XM56_19075 4260621 4261478 - RNA polymerase factor sigma-32 binds with the catalytic core of RNA polymerase to produce the holoenzyme%3B this sigma factor is responsible for the expression of heat shock promoters gene gene3815 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19075 XM56_19080 XM56_19080 ftsX ftsX 4261891 4262850 - cell division protein FtsX ABC transporter%2C membrane protein gene gene3816 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19080 XM56_19085 XM56_19085 XM56_19085 4262840 4263508 - cell division protein FtsE ATP-binding protein of an ATP-binding cassette transporter%3B when bound to FtsX%2C FtsEX localizes to the cell division site and plays a role in the assembly or stability of the septal ring under low-salt growth conditions gene gene3817 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19085 XM56_19090 XM56_19090 XM56_19090 4263514 4265037 - cell division protein FtsY gene gene3818 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19090 XM56_19095 XM56_19095 rsmD rsmD 4265256 4265939 + 16S rRNA methyltransferase catalyzes the methylation of 16S rRNA at position G966 gene gene3819 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19095 XM56_19100 XM56_19100 XM56_19100 4265929 4266201 + membrane protein gene gene3820 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19100 XM56_19105 XM56_19105 XM56_19105 4266242 4266625 - hypothetical protein gene gene3821 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19105 XM56_19110 XM56_19110 XM56_19110 4266664 4266984 - hypothetical protein gene gene3822 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19110 XM56_19115 XM56_19115 XM56_19115 4267272 4267898 + membrane protein gene gene3823 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19115 XM56_19120 XM56_19120 zntA zntA 4268183 4270513 + zinc ABC transporter ATPase P-type ATPase involved in the export of lead%2C cadmium%2C zinc and mercury gene gene3824 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19120 XM56_19125 XM56_19125 XM56_19125 4270534 4270788 - sulfur transfer protein SirA TusA%3B transfers sulfur to TusBCD complex%3B involved in thiouridation of U34 position of some tRNAs gene gene3825 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19125 XM56_19130 XM56_19130 XM56_19130 4271035 4271715 + hypothetical protein gene gene3826 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19130 XM56_19135 XM56_19135 XM56_19135 4271776 4272300 + lipoprotein gene gene3827 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19135 XM56_19140 XM56_19140 glpC glpC 4272456 4273721 - glycerol-3-phosphate dehydrogenase anaerobic%3B with GlpAB catalyzes the conversion of glycerol-3-phosphate to dihydroxyacetone phosphate gene gene3828 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19140 XM56_19145 XM56_19145 XM56_19145 4273718 4274992 - glycerol-3-phosphate dehydrogenase sn-glycerol-3-phosphate dehydrogenase (anaerobic)%3B catalyzes the formation of dihydroxyacetone from glycerol 3-phosphate%3B part of GlpABC complex%3B presumably this subunit is responsible for membrane interactions and contains iron-sulfur clusters gene gene3829 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19145 XM56_19150 XM56_19150 XM56_19150 4274982 4276637 - glycerol-3-phosphate dehydrogenase gene gene3830 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19150 XM56_19155 XM56_19155 glpT glpT 4277034 4278389 + sn-glycerol-3-phosphate transporter catalyzes the uptake of glycerol-3-phosphate into the cell with the simultaneous export of inorganic phosphate from the cell gene gene3831 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19155 XM56_19160 XM56_19160 glpQ glpQ 4278543 4279649 + glycerophosphodiester phosphodiesterase hydrolyzes deacylated phospholipids to glycerol 3-phosphate and the corresponding alcohols%3B periplasmic gene gene3832 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19160 XM56_19165 XM56_19165 XM56_19165 4279992 4280801 - hydrolase gene gene3833 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19165 XM56_19170 XM56_19170 XM56_19170 4280813 4281868 - lysophospholipase L2 lecithinase B%3B catalyzes the conversion of 1-lysophosphatidylcholine to glycerophosphocholine%3B can also hydrolyze 2-acyl glycerophosphoethanolamine and other substrates gene gene3834 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19170 XM56_19175 XM56_19175 rhtB rhtB 4282057 4282677 + homoserine transporter gene gene3835 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19175 XM56_19180 XM56_19180 XM56_19180 4282727 4283347 - threonine transporter gene gene3836 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19180 XM56_19185 XM56_19185 XM56_19185 4283410 4285260 - ATP-dependent DNA helicase RecQ functions in blocking illegitimate recombination%2C enhancing topoisomerase activity%2C initiating SOS signaling and clearing blocked replication forks%3B component of the RecF recombinational pathway gene gene3837 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19185 XM56_19190 XM56_19190 XM56_19190 4285337 4286215 - phospholipase A catalyzes the hydrolysis of phosphatidylcholine gene gene3838 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19190 XM56_19195 XM56_19195 XM56_19195 4286397 4286867 + hypothetical protein gene gene3839 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19195 XM56_19200 XM56_19200 XM56_19200 4286947 4287837 + chloramphenical resistance permease RarD gene gene3840 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19200 XM56_19205 XM56_19205 XM56_19205 4288005 4288955 - magnesium transporter CorA responsible for the influx of magnesium ions gene gene3841 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19205 XM56_19210 XM56_19210 XM56_19210 4289458 4290288 - hypothetical protein gene gene3842 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19210 XM56_19215 XM56_19215 XM56_19215 4290315 4291547 - hypothetical protein gene gene3843 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19215 XM56_19220 XM56_19220 XM56_19220 4291767 4292426 + TetR family transcriptional regulator gene gene3844 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19220 XM56_19225 XM56_19225 uvrD uvrD 4292605 4294767 - DNA-dependent helicase II unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present%3B involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair. gene gene3845 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19225 XM56_19230 XM56_19230 XM56_19230 4294867 4295583 - flavin mononucleotide phosphatase YigB%3B member of the haloacid dehalogenase (HAD)-like hydrolases superfamily of protein%3B unknown function gene gene3846 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19230 XM56_19235 XM56_19235 xerC xerC 4295583 4296494 - site-specific tyrosine recombinase XerC site-specific tyrosine recombinase which cuts and rejoins DNA molecules%3B binds cooperatively to specific DNA consensus sites%3B forms a heterotetrameric complex with XerC%3B XerCD exhibit similar sequences%3B essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation%3B cell division protein FtsK may regulate the XerCD complex%3B enzyme from Streptococcus group has unusual active site motifs gene gene3847 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19235 XM56_19240 XM56_19240 XM56_19240 4296491 4297195 - hypothetical protein gene gene3848 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19240 XM56_19245 XM56_19245 dapF dapF 4297335 4298159 - diaminopimelate epimerase involved in lysine biosynthesis%3B DAP epimerase%3B produces DL-diaminopimelate from LL-diaminopimelate gene gene3849 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19245 XM56_19250 XM56_19250 XM56_19250 4298248 4298451 - hypothetical protein gene gene3850 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19250 XM56_19255 XM56_19255 cyaY cyaY 4298565 4298885 + frataxin-like protein iron-dependent inhibitor of iron-sulfur cluster formation%3B iron-binding and oxidizing protein%3B defects in the mitochondrial frataxin protein cause Friedreich ataxis which is an autosomal recessive neurodegenerative disease%3B based on phylogenomic distribution this protein may have a role in iron-sulfur cluster protein assembly gene gene3851 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19255 XM56_19260 XM56_19260 cyaA cyaA 4299047 4301590 - adenylate cyclase catalyzes transfer of adenylyl group of ATP from pyrophosphate to the 3'-hydroxyl group to form cyclic AMP gene gene3852 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19260 XM56_19265 XM56_19265 hemC hemC 4301977 4302918 + porphobilinogen deaminase transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis gene gene3853 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19265 XM56_19270 XM56_19270 hemD hemD 4302915 4303661 + uroporphyrinogen-III synthase catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane%3B functions in tetrapyrrole and heme biosynthesis gene gene3854 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19270 XM56_19275 XM56_19275 XM56_19275 4303694 4304818 + uroporphyrin-III methyltransferase gene gene3855 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19275 XM56_19280 XM56_19280 XM56_19280 4304821 4306020 + protoheme IX biogenesis protein gene gene3856 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19280 XM56_19285 XM56_19285 XM56_19285 4306425 4307444 - transposase gene gene3857 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19285 XM56_19290 XM56_19290 XM56_19290 4308520 4308596 - tRNA-Pro tRNA gene3858 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19290 XM56_19295 XM56_19295 XM56_19295 4308672 4308758 - tRNA-Leu tRNA gene3859 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19295 XM56_19300 XM56_19300 XM56_19300 4308774 4308849 - tRNA-His tRNA gene3860 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19300 XM56_19305 XM56_19305 XM56_19305 4308933 4309009 - tRNA-Arg tRNA gene3861 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19305 XM56_19310 XM56_19310 XM56_19310 4309158 4310549 - D-alanine/D-serine/glycine permease involved in the transport across the cytoplasmic membrane of D-alanine%2C D-serine and glycine gene gene3862 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19310 XM56_19315 XM56_19315 XM56_19315 4310897 4311655 - UDP-N-acetyl-D-mannosaminuronic acid transferase gene gene3863 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19315 XM56_19320 XM56_19320 XM56_19320 4311664 4313040 - common antigen polymerase enterobacterial common antigen polymerase gene gene3864 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19320 XM56_19325 XM56_19325 XM56_19325 4313037 4314122 - 4-alpha-L-fucosyltransferase catalyzes the synthesis of a lipid-linked intermediate involved in ECA synthesis gene gene3865 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19325 XM56_19330 XM56_19330 XM56_19330 4314145 4315401 - O-antigen translocase involved in the movement of lipid III across the membrane gene gene3866 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19330 XM56_19335 XM56_19335 XM56_19335 4315403 4316533 - TDP-4-oxo-6-deoxy-D-glucose aminotransferase catalyzes the formation of dTDP-D-fucosamine from dTDP-4-oxo-6-deoxy-D-glucose in enterobacterial common antigen biosynthesis gene gene3867 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19335 XM56_19340 XM56_19340 XM56_19340 4316535 4317272 - TDP-fucosamine acetyltransferase gene gene3868 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19340 XM56_19345 XM56_19345 XM56_19345 4317250 4318131 - glucose-1-phosphate thymidylyltransferase gene gene3869 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19345 XM56_19350 XM56_19350 XM56_19350 4318391 4319458 - dTDP-glucose 4%2C6-dehydratase gene gene3870 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19350 XM56_19355 XM56_19355 wecC wecC 4319455 4320717 - UDP-N-acetyl-D-mannosamine dehydrogenase catalyzes the oxidation of UDP-N-acetyl-D-mannosamine to UDP-N-acetylmannosaminuronic acid gene gene3871 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19355 XM56_19360 XM56_19360 XM56_19360 4320714 4321844 - UDP-N-acetylglucosamine 2-epimerase gene gene3872 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19360 XM56_19365 XM56_19365 XM56_19365 4321924 4322985 - lipopolysaccharide biosynthesis protein WzzE Enterobacterial Common Antigen (ECA) polysaccharide chain length modulation protein gene gene3873 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19365 XM56_19370 XM56_19370 XM56_19370 4323021 4324103 - UDP-phosphate N-acetylglucosaminyl 1-phosphate transferase catalyzes the formation of alpha-N-acetylglucosaminyl-pyrophosphoryl-undecaprenyl from alpha-N-acetylglucosaminyl 1-phosphate and the lipid carrier undecaprenyl phosphate gene gene3874 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19370 XM56_19375 XM56_19375 XM56_19375 4324537 4325556 + transposase gene gene3875 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19375 XM56_19380 XM56_19380 rho rho 4325976 4327235 - transcription termination factor Rho An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes gene gene3876 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19380 XM56_19385 XM56_19385 trxA trxA 4327721 4328047 - thioredoxin gene gene3877 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19385 XM56_19390 XM56_19390 XM56_19390 4328166 4329452 + ATP-dependent RNA helicase RhlB enables ATP-dependent unwinding of double stranded RNA as a component of the RNA degradosome%2C a multi-enzyme complex important in RNA processing and messenger RNA degradation gene gene3878 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19390 XM56_19395 XM56_19395 XM56_19395 4329459 4330952 + guanosine polyphosphate pyrophosphohydrolase catalyzes the conversion of guanosine 5'-triphosphate%2C3'-diphosphate (pppGpp) to guanosine 5'-diphosphate%2C3'-diphosphate (ppGpp)%3B pppGpp and ppGpp control the stringent response during amino acid starvation gene gene3879 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19395 XM56_19400 XM56_19400 XM56_19400 4331109 4332935 + exo-poly-alpha-D-galacturonosidase gene gene3880 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19400 XM56_19405 XM56_19405 XM56_19405 4332991 4335015 - ATP-dependent DNA helicase Rep single-stranded DNA-dependent ATPase%3B initiates unwinding at a nick in the DNA%3B involved in DNA replication gene gene3881 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19405 XM56_19410 XM56_19410 XM56_19410 4335229 4335510 + peptidylprolyl isomerase rotamase C%3B accelerates isomerization of the peptidyl prolyl bond gene gene3882 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19410 XM56_19415 XM56_19415 XM56_19415 4336124 4336654 + fimbrial protein gene gene3883 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19415 XM56_19420 XM56_19420 XM56_19420 4336790 4337518 + fimbrial chaperone protein gene gene3884 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19420 XM56_19425 XM56_19425 XM56_19425 4337559 4340246 + fimbrial protein gene gene3885 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19425 XM56_19430 XM56_19430 XM56_19430 4340357 4341631 + fimbrial protein gene gene3886 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19430 XM56_19435 XM56_19435 XM56_19435 4341597 4342355 + molecular chaperone gene gene3887 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19435 XM56_19440 XM56_19440 XM56_19440 4342458 4342817 - antitermination protein gene gene3888 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19440 XM56_19445 XM56_19445 XM56_19445 4343177 4343431 - colicin transporter gene gene3889 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19445 XM56_19450 XM56_19450 XM56_19450 4343714 4343968 - colicin immunity protein gene gene3890 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19450 XM56_19455 XM56_19455 colicin transporter colicin transporter 4343970 4346641 - disrupted pseudogene gene3891 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19455 XM56_19460 XM56_19460 XM56_19460 4347013 4348491 - ketol-acid reductoisomerase catalyzes the formation of (R)-2%2C3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis gene gene3892 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19460 XM56_19465 XM56_19465 XM56_19465 4348744 4349640 + transcriptional regulator participates in controlling several genes involved in isoleucine and valine biosynthesis%3B activates the transcription of the ilvC gene in the presence of acetolactate or acetohydroxybutyrate gene gene3893 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19465 XM56_19470 XM56_19470 hypothetical protein hypothetical protein 4350043 4350531 - disrupted pseudogene gene3894 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19470 XM56_19475 XM56_19475 XM56_19475 4350948 4352285 - hypothetical protein gene gene3895 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19475 XM56_19480 XM56_19480 XM56_19480 4352561 4353580 - transposase gene gene3896 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19480 XM56_19485 XM56_19485 XM56_19485 4353925 4355469 - threonine dehydratase threonine deaminase%3B threonine dehydratase%3B in Escherichia coli%2C IlvA is part of the isoleucine biosynthetic pathway gene gene3897 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19485 XM56_19490 XM56_19490 XM56_19490 4355475 4357325 - dihydroxy-acid dehydratase catalyzes the dehydration of 2%2C3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis gene gene3898 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19490 XM56_19495 XM56_19495 XM56_19495 4357405 4358331 - branched-chain amino acid aminotransferase gene gene3899 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19495 XM56_19500 XM56_19500 ilvM ilvM 4358354 4358611 - acetolactate synthase 2 regulatory subunit gene gene3900 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19500 XM56_19505 XM56_19505 XM56_19505 4358608 4360254 - acetolactate synthase catalytic subunit catalyzes the formation of 2-acetolactate from pyruvate%3B also known as acetolactate synthase large subunit gene gene3901 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19505 XM56_19510 XM56_19510 XM56_19510 4360828 4362351 + ATP-dependent protease among the AAA+ ATPases%2C the YifB protease family belongs to the Helix 2 insert clade%3B unknown function gene gene3902 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19510 XM56_19515 XM56_19515 XM56_19515 4362455 4362793 - hypothetical protein gene gene3903 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19515 XM56_19520 XM56_19520 XM56_19520 4362913 4363794 + transcriptional regulator HdfR Negatively regulates the transcription of the flagellar master operon flhDC by binding to the upstream region of the operon gene gene3904 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19520 XM56_19525 XM56_19525 XM56_19525 4363781 4364773 - ABC transporter permease membrane component of a putative sugar ABC transporter system gene gene3905 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19525 XM56_19530 XM56_19530 XM56_19530 4364773 4365771 - sugar ABC transporter permease gene gene3906 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19530 XM56_19535 XM56_19535 XM56_19535 4365804 4367294 - sugar ABC transporter ATP-binding protein gene gene3907 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19535 XM56_19540 XM56_19540 XM56_19540 4367379 4368335 - sugar ABC transporter substrate-binding protein gene gene3908 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19540 XM56_19545 XM56_19545 XM56_19545 4368853 4368928 - tRNA-Trp tRNA gene3909 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19545 XM56_19550 XM56_19550 XM56_19550 4368982 4369058 - tRNA-Asp tRNA gene3910 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19550 XM56_19555 XM56_19555 XM56_19555 4369184 4369299 - 5S ribosomal RNA rRNA gene3911 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19555 XM56_19560 XM56_19560 XM56_19560 4369470 4372505 - 23S ribosomal RNA rRNA gene3912 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19560 XM56_19565 XM56_19565 XM56_19565 4372843 4372918 - tRNA-Ala tRNA gene3913 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19565 XM56_19570 XM56_19570 XM56_19570 4373029 4373105 - tRNA-Ile tRNA gene3914 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19570 XM56_19575 XM56_19575 XM56_19575 4373205 4374753 - 16S ribosomal RNA rRNA gene3915 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19575 XM56_19580 XM56_19580 XM56_19580 4375200 4376063 - glutamate racemase converts L-glutamate to D-glutamate%2C a component of peptidoglycan gene gene3916 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19580 XM56_19585 XM56_19585 btuB btuB 4376008 4377906 - vitamin B12/cobalamin outer membrane transporter involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space gene gene3917 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19585 XM56_19590 XM56_19590 XM56_19590 4378332 4379435 + tRNA (uracil-5-)-methyltransferase catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs gene gene3918 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19590 XM56_19595 XM56_19595 XM56_19595 4379701 4380141 - hypothetical protein gene gene3919 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19595 XM56_19600 XM56_19600 XM56_19600 4380164 4380796 - transcriptional regulator negatively controls the expression of fabA and fabB%2C genes involved in the unsaturated fatty acid biosynthesis gene gene3920 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19600 XM56_19605 XM56_19605 XM56_19605 4381014 4382414 + pyridine nucleotide transhydrogenase catalyzes the conversion of NADPH to NADH gene gene3921 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19605 XM56_19610 XM56_19610 XM56_19610 4382397 4383329 - transcriptional regulator Activates the expression of a regulon of hydrogen peroxide-inducible genes such as katG%2C gor%2C ahpC%2C ahpF%2C oxyS%2C dps%2C fur and grxA gene gene3922 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19610 XM56_19615 XM56_19615 XM56_19615 4383477 4384208 + glutathione peroxidase gene gene3923 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19615 XM56_19620 XM56_19620 XM56_19620 4384501 4385949 + dihydrolipoamide dehydrogenase Catalyzes the oxidation of dihydrolipoamide to lipoamide gene gene3924 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19620 XM56_19625 XM56_19625 XM56_19625 4386231 4386923 - energy transducer TonB gene gene3925 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19625 XM56_19630 XM56_19630 XM56_19630 4387108 4388439 - hemolysin secretion protein D gene gene3926 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19630 XM56_19635 XM56_19635 XM56_19635 4388473 4390278 - peptidase gene gene3927 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19635 XM56_19640 XM56_19640 XM56_19640 4390444 4391136 - preprotein translocase subunit SecG gene gene3928 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19640 XM56_19645 XM56_19645 XM56_19645 4391153 4391827 - hemophore protein gene gene3929 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19645 XM56_19650 XM56_19650 XM56_19650 4391997 4392617 - heme acquisition hemophore HasA gene gene3930 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19650 XM56_19655 XM56_19655 XM56_19655 4392783 4395272 - TonB-dependent receptor gene gene3931 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19655 XM56_19660 XM56_19660 XM56_19660 4395836 4397209 - argininosuccinate lyase catalyzes the formation of arginine from (N-L-arginino)succinate gene gene3932 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19660 XM56_19665 XM56_19665 XM56_19665 4397381 4398154 - acetylglutamate kinase gene gene3933 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19665 XM56_19670 XM56_19670 XM56_19670 4398233 4399237 - N-acetyl-gamma-glutamyl-phosphate reductase gene gene3934 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19670 XM56_19675 XM56_19675 XM56_19675 4399485 4400663 + acetylornithine deacetylase catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine in arginine biosynthesis gene gene3935 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19675 XM56_19680 XM56_19680 XM56_19680 4400887 4403526 + phosphoenolpyruvate carboxylase catalyzes the formation of oxaloacetate from phosphoenolpyruvate gene gene3936 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19680 XM56_19685 XM56_19685 metF metF 4404372 4405256 - 5%2C10-methylenetetrahydrofolate reductase MTHFR%3B catalyzes NADH-linked reduction of 5%2C10-methylenetetrahydrofolate to 5-methyltetrahydrofolate using FAD as a cofactor gene gene3937 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19685 XM56_19690 XM56_19690 metL metL 4405498 4407933 - aspartate kinase multifunctional homodimeric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine%3B functions in a number of amino acid biosynthetic pathways gene gene3938 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19690 XM56_19695 XM56_19695 XM56_19695 4407936 4409096 - cystathionine gamma-synthase catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine gene gene3939 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19695 XM56_19700 XM56_19700 XM56_19700 4409472 4409789 + transcriptional repressor protein MetJ when combined with S-adenosylmethionine represses the expression of the methionine regulon and of proteins involved in S-adenosylmethionine synthesis gene gene3940 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19700 XM56_19705 XM56_19705 rpmE rpmE 4409882 4410097 - 50S ribosomal protein L31 RpmE%3B there appears to be two types of ribosomal proteins L31 in bacterial genomes%3B some contain a CxxC motif while others do not%3B Bacillus subtilis has both types%3B the proteins in this cluster have the CXXC motif%3B RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth%3B expression of ytiA is controlled by a zinc-specific transcriptional repressor%3B RpmE contains one zinc ion and a CxxC motif is responsible for this binding%3B forms an RNP particle along with proteins L5%2C L18%2C and L25 and 5S rRNA%3B found crosslinked to L2 and L25 and EF-G%3B may be near the peptidyltransferase site of the 50S ribosome gene gene3941 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19705 XM56_19710 XM56_19710 XM56_19710 4410345 4412543 + primosome assembly protein PriA binding of PriA to forked DNA starts the assembly of the primosome%2C also possesses 3'-5' helicase activity gene gene3942 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19710 XM56_19715 XM56_19715 XM56_19715 4412785 4413813 + transcriptional regulator gene gene3943 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19715 XM56_19720 XM56_19720 XM56_19720 4413879 4414748 + cell division protein FtsN gene gene3944 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19720 XM56_19725 XM56_19725 XM56_19725 4414848 4415372 + ATP-dependent protease subunit HslV heat shock protein involved in degradation of misfolded proteins gene gene3945 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19725 XM56_19730 XM56_19730 hslU hslU 4415409 4416740 + ATP-dependent protease ATP-binding subunit HslU heat shock protein involved in degradation of misfolded proteins gene gene3946 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19730 XM56_19735 XM56_19735 XM56_19735 4416891 4417823 + 1%2C4-dihydroxy-2-naphthoate octaprenyltransferase catalyzes the formation of dimethylmenaquinone from 1%2C4-dihydroxy-2-naphthoate and octaprenyl diphosphate gene gene3947 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19735 XM56_19740 XM56_19740 XM56_19740 4417954 4418439 + ribonuclease activity regulator protein RraA regulator of RNase E%3B increases half-life and abundance of RNAs%3B interacts with RNase E possibly inhibiting catalytic activity gene gene3948 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19740 XM56_19745 XM56_19745 XM56_19745 4418576 4418815 - septal ring assembly protein ZapB interacts with FisZ and is necessary for Z-ring formation gene gene3949 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19745 XM56_19750 XM56_19750 XM56_19750 4419394 4420242 + glycerol uptake facilitator GlpF involved in the transport of glycerol into the cell gene gene3950 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19750 XM56_19755 XM56_19755 glpK glpK 4420319 4421842 + glycerol kinase Converts glycerol and ADP to glycerol-3-phosphate and ADP gene gene3951 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19755 XM56_19760 XM56_19760 XM56_19760 4422024 4423034 + fructose 1%2C6-bisphosphatase gene gene3952 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19760 XM56_19765 XM56_19765 emrD emrD 4423302 4424486 - multidrug resistance protein D multidrug efflux protein involved in adaptation to low energy shock gene gene3953 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19765 XM56_19770 XM56_19770 XM56_19770 4425241 4426176 + transferase gene gene3954 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19770 XM56_19775 XM56_19775 XM56_19775 4426292 4431214 + type IV secretion protein Rhs gene gene3955 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19775 XM56_19780 XM56_19780 XM56_19780 4431456 4432202 + ferredoxin-NADP reductase gene gene3956 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19780 XM56_19785 XM56_19785 XM56_19785 4432261 4432698 - membrane protein gene gene3957 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19785 XM56_19790 XM56_19790 XM56_19790 4432857 4433462 + hypothetical protein gene gene3958 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19790 XM56_19795 XM56_19795 XM56_19795 4433591 4434358 + triosephosphate isomerase Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate gene gene3959 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19795 XM56_19800 XM56_19800 XM56_19800 4434374 4435246 - hypothetical protein gene gene3960 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19800 XM56_19805 XM56_19805 XM56_19805 4435461 4436450 - sulfate transporter subunit gene gene3961 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19805 XM56_19810 XM56_19810 XM56_19810 4436661 4437644 - 6-phosphofructokinase catalyzes the formation of D-fructose 1%2C6-bisphosphate from D-fructose 6-phosphate in glycolysis gene gene3962 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19810 XM56_19815 XM56_19815 fieF fieF 4437894 4438796 - ferrous iron transporter member of cation diffusion facilitator family%3B CDF%3B membrane-bound%3B induced by both zinc and iron%2C but does not induce resistance to zinc%3B can transport zinc(II) in a proton-dependent manner%3B instead this protein induces iron resistance%3B forms dimers gene gene3963 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19815 XM56_19820 XM56_19820 cpxP cpxP 4438928 4439425 - periplasmic stress adaptor protein CpxP repressor of the Cpx envelope stress response pathway which occurs via periplasmic interactions with CpxA%3B CpxP is degraded by DegP protease especially in the presence of misfolded substrates gene gene3964 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19820 XM56_19825 XM56_19825 XM56_19825 4439613 4440311 + transcriptional regulator response regulator in two-component regulatory system with CpxA%3B part of the envelope stress response system gene gene3965 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19825 XM56_19830 XM56_19830 cpxA cpxA 4440308 4441684 + two-component sensor protein part of two-component CpxA/CpxR system%3B senses envelope stress%3B upregulates a number of periplasmic folding and trafficking factors gene gene3966 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19830 XM56_19835 XM56_19835 XM56_19835 4441754 4442914 - 6-O-methylguanine DNA methyltransferase regulates genes involved in the repair of alkylated DNA%3B repairs DNA containing 6-O-methylguanine gene gene3967 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19835 XM56_19840 XM56_19840 XM56_19840 4443024 4443527 + rRNA methylase member of the SPOUT superfamily of RNA methyltransferases gene gene3968 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19840 XM56_19845 XM56_19845 cysE cysE 4443862 4444683 - serine acetyltransferase catalyzes the O-acetylation of serine gene gene3969 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19845 XM56_19850 XM56_19850 XM56_19850 4444809 4445828 - glycerol-3-phosphate dehydrogenase gene gene3970 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19850 XM56_19855 XM56_19855 XM56_19855 4445828 4446298 - preprotein translocase subunit SecB molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm%3B in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA gene gene3971 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19855 XM56_19860 XM56_19860 XM56_19860 4446390 4446638 - glutaredoxin gene gene3972 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19860 XM56_19865 XM56_19865 XM56_19865 4446688 4447122 - hypothetical protein gene gene3973 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19865 XM56_19870 XM56_19870 XM56_19870 4447364 4448911 + phosphoglyceromutase catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate gene gene3974 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19870 XM56_19875 XM56_19875 XM56_19875 4448921 4450288 + peptidase M37 gene gene3975 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19875 XM56_19880 XM56_19880 XM56_19880 4450312 4451316 + sugar deacetylase gene gene3976 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19880 XM56_19885 XM56_19885 XM56_19885 4451707 4453041 - peptidase gene gene3977 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19885 XM56_19890 XM56_19890 XM56_19890 4453057 4454331 - membrane protein gene gene3978 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19890 XM56_19895 XM56_19895 XM56_19895 4454800 4454979 - hypothetical protein gene gene3979 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19895 XM56_19900 XM56_19900 tdh tdh 4454995 4456020 - L-threonine 3-dehydrogenase converts threonine and NAD to 1%2C2-amino-3-oxobutanoate and NADH%3B functions in threonine catabolism gene gene3980 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19900 XM56_19905 XM56_19905 XM56_19905 4456045 4457256 - 2-amino-3-ketobutyrate CoA ligase catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine gene gene3981 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19905 XM56_19910 XM56_19910 rfaD rfaD 4457500 4458432 + ADP-L-glycero-D-manno-heptose-6-epimerase catalyzes the interconversion between ADP-D-glycero-beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose gene gene3982 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19910 XM56_19915 XM56_19915 XM56_19915 4458463 4459527 + ADP-heptose--LPS heptosyltransferase catalyzes the transfer of the second heptose to the heptosyl-KDO2 moiety of the lipopolysaccharide inner core gene gene3983 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19915 XM56_19920 XM56_19920 XM56_19920 4459527 4460492 + ADP-heptose--LPS heptosyltransferase gene gene3984 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19920 XM56_19925 XM56_19925 XM56_19925 4461037 4462314 + 3-deoxy-D-manno-octulosonic acid transferase catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A gene gene3985 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19925 XM56_19930 XM56_19930 XM56_19930 4462315 4463097 + lipopolysaccharide biosynthesis protein gene gene3986 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19930 XM56_19935 XM56_19935 XM56_19935 4463094 4463573 + phosphopantetheine adenylyltransferase gene gene3987 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19935 XM56_19940 XM56_19940 XM56_19940 4463871 4464680 - formamidopyrimidine-DNA glycosylase Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases gene gene3988 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19940 XM56_19945 XM56_19945 rpmG rpmG 4464767 4464934 - 50S ribosomal protein L33 in Escherichia coli BM108%2C a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function%3B there are paralogous genes in several bacterial genomes%2C and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31%3B the proteins in this group lack the CXXC motif gene gene3989 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19945 XM56_19950 XM56_19950 rpmB rpmB 4464946 4465182 - 50S ribosomal protein L28 required for 70S ribosome assembly gene gene3990 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19950 XM56_19955 XM56_19955 XM56_19955 4465446 4466114 - hypothetical protein gene gene3991 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19955 XM56_19960 XM56_19960 XM56_19960 4466306 4467538 + bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine%2C which is then decarboxylated to form 4'-phosphopantotheine gene gene3992 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19960 XM56_19965 XM56_19965 XM56_19965 4467516 4467974 + deoxyuridine 5'-triphosphate nucleotidohydrolase catalyzes the formation of dUMP from dUTP gene gene3993 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19965 XM56_19970 XM56_19970 slmA slmA 4468096 4468692 + division inhibitor protein FtsZ binding protein%3B synthetically lethal with a defect in the Min system%3B this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly gene gene3994 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19970 XM56_19975 XM56_19975 pyrE pyrE 4468770 4469411 - orotate phosphoribosyltransferase involved in fifth step of pyrimidine biosynthesis%3B converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate gene gene3995 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19975 XM56_19980 XM56_19980 rph rph 4469565 4470281 - ribonuclease PH RNase PH%3B tRNA nucleotidyltransferase%3B forms hexamers in Bacillus subtilis%3B phosphoroltic 3'-5' exoribonuclease%3B involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs gene gene3996 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19980 XM56_19985 XM56_19985 XM56_19985 4470408 4471271 + hypothetical protein gene gene3997 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19985 XM56_19990 XM56_19990 XM56_19990 4471673 4472503 + beta-lactamase gene gene3998 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19990 XM56_19995 XM56_19995 XM56_19995 4472500 4472691 - hypothetical protein gene gene3999 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_19995 XM56_20000 XM56_20000 XM56_20000 4473027 4475021 + RNase II stability modulator c-di-GMP phosphodiesterase%3B probably degrades signalling molecule c-di-GMP gene gene4000 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20000 XM56_20005 XM56_20005 XM56_20005 4475047 4475913 - enoyl-CoA hydratase regulator of pathogenicity factor RpfF%3B involved in synthesis of a diffusible signal factor involved in the regulation of extracellular enzymes gene gene4001 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20005 XM56_20010 XM56_20010 XM56_20010 4476199 4477383 + nucleoside permease gene gene4002 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20010 XM56_20015 XM56_20015 XM56_20015 4477479 4477943 - hypothetical protein gene gene4003 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20015 XM56_20020 XM56_20020 XM56_20020 4478250 4478867 + membrane protein gene gene4004 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20020 XM56_20025 XM56_20025 ligB ligB 4478885 4480582 - NAD-dependent DNA ligase LigB this ligase is similar to LigA but it lacks the C-terminal BRCT domain%3B catalyzes strand joining of nicked DNA in the presence of a divalent cation and NAD+ gene gene4005 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20025 XM56_20030 XM56_20030 XM56_20030 4480865 4481488 + guanylate kinase gene gene4006 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20030 XM56_20035 XM56_20035 rpoZ rpoZ 4481543 4481818 + DNA-directed RNA polymerase subunit omega Promotes RNA polymerase assembly%3B latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits gene gene4007 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20035 XM56_20040 XM56_20040 XM56_20040 4481837 4483939 + (p)ppGpp synthetase gene gene4008 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20040 XM56_20045 XM56_20045 XM56_20045 4483945 4484637 + tRNA guanosine-2'-O-methyltransferase specifically modifies tRNA at position G18 gene gene4009 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20045 XM56_20050 XM56_20050 XM56_20050 4484638 4486719 + ATP-dependent DNA helicase RecG catalyzes branch migration in Holliday junction intermediates gene gene4010 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20050 XM56_20055 XM56_20055 XM56_20055 4486906 4487925 + transposase gene gene4011 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20055 XM56_20060 XM56_20060 XM56_20060 4488336 4489550 - sodium:glutamate symporter is involved with the sodium-dependent uptake of glutamate gene gene4012 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20060 XM56_20065 XM56_20065 XM56_20065 4489788 4491173 + xanthine permease XanP high-affinity transporter for xanthine gene gene4013 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20065 XM56_20070 XM56_20070 XM56_20070 4491320 4493029 + hypothetical protein gene gene4014 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20070 XM56_20075 XM56_20075 XM56_20075 4493839 4494525 - LuxR family transcriptional regulator gene gene4015 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20075 XM56_20080 XM56_20080 XM56_20080 4494554 4495240 - LuxR family transcriptional regulator gene gene4016 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20080 XM56_20085 XM56_20085 XM56_20085 4495253 4495498 - transcriptional regulator gene gene4017 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20085 XM56_20090 XM56_20090 XM56_20090 4495847 4496770 - hypothetical protein gene gene4018 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20090 XM56_20095 XM56_20095 XM56_20095 4497024 4497461 - D-tyrosyl-tRNA(Tyr) deacylase hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr)%3B possible defense mechanism against a harmful effect of D-tyrosine gene gene4019 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20095 XM56_20100 XM56_20100 XM56_20100 4497468 4498358 - hypothetical protein gene gene4020 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20100 XM56_20105 XM56_20105 XM56_20105 4498451 4499038 - alpha-D-glucose-1-phosphatase gene gene4021 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20105 XM56_20110 XM56_20110 XM56_20110 4499352 4501175 - GTP-binding protein TypA gene gene4022 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20110 XM56_20115 XM56_20115 glnA glnA 4501677 4503086 + glutamine synthetase forms a homododecamer%3B forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate%3B also functions in the assimilation of ammonia%3B highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltransferase from specific tyrosine residues%3B addition of adenylyl groups results in inactivation of the enzyme gene gene4023 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20115 XM56_20120 XM56_20120 XM56_20120 4503151 4503279 - ATPase AAA gene gene4024 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20120 XM56_20125 XM56_20125 glnL glnL 4503454 4504503 + nitrogen regulation protein NR(II) sensory histidine kinase in two-component regulatory system with GlnG%3B acts as a signal transducer which responds to the nitrogen level of cell and modulates the activity of ntrC by phosphorylation/dephosphorylation gene gene4025 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20125 XM56_20130 XM56_20130 glnG glnG 4504511 4505923 + nitrogen regulation protein NR(I) response regulator of a two-component regulatory system involved in the activation of nitrogen assimilation genes%3B interacts with sigma-54 gene gene4026 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20130 XM56_20135 XM56_20135 XM56_20135 4506072 4507445 - coproporphyrinogen III oxidase catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III gene gene4027 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20135 XM56_20140 XM56_20140 XM56_20140 4507628 4508194 - GTPase activator gene gene4028 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20140 XM56_20145 XM56_20145 XM56_20145 4508957 4509610 + GTP-binding protein gene gene4029 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20145 XM56_20150 XM56_20150 XM56_20150 4510044 4512842 - DNA polymerase I has 3'-5' exonuclease%2C 5'-3' exonuclease and 5'-3'polymerase activities%2C primarily functions to fill gaps during DNA replication and repair gene gene4030 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20150 XM56_20155 XM56_20155 XM56_20155 4513433 4514056 - protein disulfide isomerase gene gene4031 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20155 XM56_20160 XM56_20160 XM56_20160 4514084 4515070 - serine/threonine protein kinase catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro%3B specific substrate in vivo has not been identified yet%3B plays a role in long-term cell survival and expression of surface appendages gene gene4032 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20160 XM56_20165 XM56_20165 XM56_20165 4515162 4515431 - hypothetical protein gene gene4033 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20165 XM56_20170 XM56_20170 mobA mobA 4515585 4516175 + molybdopterin-guanine dinucleotide biosynthesis protein MobA in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis gene gene4034 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20170 XM56_20175 XM56_20175 XM56_20175 4516172 4516705 + molybdopterin-guanine dinucleotide biosynthesis protein B in Escherichia coli the MobB protein is not essential but has been found to interact with multiple proteins involved in the molybdopterin guanine dinucleotide cofactor biosynthesis pathway gene gene4035 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20175 XM56_20180 XM56_20180 XM56_20180 4516734 4517219 - integrase gene gene4036 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20180 XM56_20185 XM56_20185 hypothetical protein hypothetical protein 4517343 4517531 - disrupted pseudogene gene4037 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20185 XM56_20190 XM56_20190 XM56_20190 4517687 4517950 - hypothetical protein gene gene4038 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20190 XM56_20195 XM56_20195 XM56_20195 4518155 4518270 - 5S ribosomal RNA rRNA gene4039 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20195 XM56_20200 XM56_20200 XM56_20200 4518441 4521476 - 23S ribosomal RNA rRNA gene4040 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20200 XM56_20205 XM56_20205 XM56_20205 4521847 4521922 - tRNA-Glu tRNA gene4041 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20205 XM56_20210 XM56_20210 XM56_20210 4522118 4523666 - 16S ribosomal RNA rRNA gene4042 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20210 XM56_20215 XM56_20215 XM56_20215 4524216 4524905 + GntR family transcriptional regulator gene gene4043 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20215 XM56_20220 XM56_20220 major facilitator transporter major facilitator transporter 4524976 4526383 + disrupted pseudogene gene4044 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20220 XM56_20225 XM56_20225 XM56_20225 4526380 4527381 - transcriptional regulator binds to the purF operator and coregulates other genes for de novo purine nucleotide synthesis%3B is involved in regulation of purB%2C purC%2C purEK%2C purHD%2C purL%2C purMN and guaBA expression%3B binds hypoxanthine and guanine as inducers gene gene4045 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20225 XM56_20230 XM56_20230 XM56_20230 4527384 4528310 - ribokinase catalyzes the formation of D-ribose 5-phosphate from ribose gene gene4046 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20230 XM56_20235 XM56_20235 XM56_20235 4528401 4529291 - D-ribose transporter subunit RbsB periplasmic substrate-binding component of the ATP-dependent ribose transport system gene gene4047 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20235 XM56_20240 XM56_20240 rbsC rbsC 4529357 4530322 - ribose ABC transporter permease functions to transport ribose at high affinity%3B forms a complex with RbsA2C2B gene gene4048 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20240 XM56_20245 XM56_20245 XM56_20245 4530410 4531912 - sugar ABC transporter ATP-binding protein gene gene4049 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20245 XM56_20250 XM56_20250 XM56_20250 4531920 4532339 - D-ribose pyranase cytoplasmic mutarotase that catalyzes the conversion between beta-pyran and beta-furan forms of D-ribose%3B RbsD is required for efficient ribose utilization in E. coli%3B rbsD-mutant E. coli strains are unable to use ribose as a sole carbon source gene gene4050 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20250 XM56_20255 XM56_20255 trkD trkD 4532676 4534547 - potassium transport protein Kup Responsible for the low-affinity transport of potassium into the cell%3B involved in potassium ion uptake under hyper-osmotic stress at a low pH gene gene4051 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20255 XM56_20260 XM56_20260 XM56_20260 4534835 4536343 + ATPase interacts with LdcI%2C lysine decarboxylase%3B may be active in late log/ early stationary phase gene gene4052 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20260 XM56_20265 XM56_20265 XM56_20265 4536347 4537813 + hypothetical protein contains a von Willibrand factor type A domain%3B stimulates the ATPase activity of RavA gene gene4053 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20265 XM56_20270 XM56_20270 XM56_20270 4537823 4538494 - membrane protein gene gene4054 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20270 XM56_20275 XM56_20275 XM56_20275 4538727 4539719 - asparagine synthetase AsnA catalyzes the formation of asparagine from aspartate and ammonia gene gene4055 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20275 XM56_20280 XM56_20280 XM56_20280 4539905 4540366 + transcriptional regulator transcriptional repressor of asnA which codes for aspartate-ammonia ligase gene gene4056 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20280 XM56_20285 XM56_20285 XM56_20285 4540458 4540898 + FMN-binding protein MioC An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group gene gene4057 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20285 XM56_20290 XM56_20290 XM56_20290 4541279 4543168 + hypothetical protein gene gene4058 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20290 XM56_20295 XM56_20295 gidB gidB 4543317 4543937 + 16S rRNA methyltransferase glucose-inhibited division protein B%3B SAM-dependent methyltransferase%3B methylates the N7 position of guanosine in position 527 of 16S rRNA gene gene4059 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20295 XM56_20300 XM56_20300 XM56_20300 4544604 4544987 + ATP synthase F0F1 subunit I gene gene4060 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20300 XM56_20305 XM56_20305 XM56_20305 4545043 4545867 + ATP synthase F0F1 subunit A Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0 gene gene4061 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20305 XM56_20310 XM56_20310 XM56_20310 4545917 4546156 + ATP F0F1 synthase subunit C Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0 gene gene4062 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20310 XM56_20315 XM56_20315 XM56_20315 4546217 4546687 + ATP F0F1 synthase subunit B Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel. gene gene4063 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20315 XM56_20320 XM56_20320 XM56_20320 4546702 4547235 + ATP F0F1 synthase subunit delta Produces ATP from ADP in the presence of a proton gradient across the membrane%3B the delta subunit is part of the catalytic core of the ATP synthase complex gene gene4064 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20320 XM56_20325 XM56_20325 XM56_20325 4547250 4548791 + ATP F0F1 synthase subunit alpha produces ATP from ADP in the presence of a proton gradient across the membrane%3B the alpha chain is a catalytic subunit gene gene4065 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20325 XM56_20330 XM56_20330 XM56_20330 4548853 4549716 + ATP F0F1 synthase subunit gamma Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit gene gene4066 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20330 XM56_20335 XM56_20335 XM56_20335 4549873 4551255 + ATP synthase F0F1 subunit beta gene gene4067 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20335 XM56_20340 XM56_20340 atpC atpC 4551277 4551699 + ATP synthase F0F1 subunit epsilon part of catalytic core of ATP synthase%3B alpha(3)beta(3)gamma(1)delta(1)epsilon(1)%3B involved in producing ATP from ADP in the presence of the proton motive force across the membrane gene gene4068 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20340 XM56_20345 XM56_20345 glmU glmU 4552213 4553583 + bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase forms a homotrimer%3B catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc%3B function in cell wall synthesis gene gene4069 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20345 XM56_20350 XM56_20350 XM56_20350 4553931 4555760 + glucosamine--fructose-6-phosphate aminotransferase Catalyzes the first step in hexosamine metabolism%2C converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source gene gene4070 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20350 XM56_20355 XM56_20355 XM56_20355 4556018 4556200 - hypothetical protein gene gene4071 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20355 XM56_20360 XM56_20360 XM56_20360 4556411 4557451 + phosphate ABC transporter substrate-binding protein gene gene4072 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20360 XM56_20365 XM56_20365 pstC pstC 4557634 4558590 + phosphate transporter permease subunit PstC part of the ATP-dependent phosphate uptake system PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions gene gene4073 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20365 XM56_20370 XM56_20370 pstA pstA 4558592 4559479 + phosphate transporter permease subunit PtsA Part of the ABC transporter complex PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions gene gene4074 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20370 XM56_20375 XM56_20375 XM56_20375 4559580 4560356 + phosphate ABC transporter ATP-binding protein gene gene4075 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20375 XM56_20380 XM56_20380 XM56_20380 4560421 4561143 + transcriptional regulator PhoU regulates several genes involved in high affinity phosphate uptake%3B under conditions of high phosphate concentrations downregulates the PHO regulon gene gene4076 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20380 XM56_20385 XM56_20385 XM56_20385 4561510 4562127 + membrane protein gene gene4077 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20385 XM56_20390 XM56_20390 XM56_20390 4562373 4563227 + amino acid ABC transporter substrate-binding protein gene gene4078 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20390 XM56_20395 XM56_20395 XM56_20395 4563456 4564193 + amino acid ABC transporter permease gene gene4079 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20395 XM56_20400 XM56_20400 XM56_20400 4564195 4564950 + ABC transporter permease gene gene4080 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20400 XM56_20405 XM56_20405 XM56_20405 4564947 4565615 - 6-phosphogluconate phosphatase gene gene4081 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20405 XM56_20410 XM56_20410 XM56_20410 4565885 4567213 + adenine permease PurP involved in the transport or adenine gene gene4082 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20410 XM56_20415 XM56_20415 XM56_20415 4567299 4567790 - GlcG gene gene4083 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20415 XM56_20420 XM56_20420 XM56_20420 4568030 4568647 - LuxR family transcriptional regulator gene gene4084 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20420 XM56_20425 XM56_20425 XM56_20425 4568622 4569971 - histidine kinase gene gene4085 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20425 XM56_20430 XM56_20430 XM56_20430 4570079 4570651 - hypothetical protein gene gene4086 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20430 XM56_20435 XM56_20435 XM56_20435 4570911 4572815 + chemotaxis protein gene gene4087 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20435 XM56_20440 XM56_20440 XM56_20440 4572982 4573644 - methionine ABC transporter permease gene gene4088 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20440 XM56_20445 XM56_20445 XM56_20445 4573644 4574660 - methionine ABC transporter ATP-binding protein gene gene4089 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20445 XM56_20450 XM56_20450 XM56_20450 4574672 4575481 - methionine-binding protein gene gene4090 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20450 XM56_20455 XM56_20455 XM56_20455 4575713 4576912 - trans-2-enoyl-CoA reductase enzyme from Treponema denticola exhibits NADH-dependent trans-2-enoyl-CoA reductase activity gene gene4091 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20455 XM56_20460 XM56_20460 trmE trmE 4577021 4578385 - tRNA modification GTPase TrmE in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine%2C which is found in the wobble position of some tRNAs and affects ribosomal frameshifting%3B shows potassium-dependent dimerization and GTP hydrolysis%3B also involved in regulation of glutamate-dependent acid resistance and activation of gadE gene gene4092 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20460 XM56_20465 XM56_20465 XM56_20465 4578553 4580199 - membrane protein insertase functions to insert inner membrane proteins into the IM in Escherichia coli%3B interacts with transmembrane segments%3B functions in both Sec-dependent and -independent membrane insertion%3B similar to Oxa1p in mitochondria gene gene4093 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20465 XM56_20470 XM56_20470 XM56_20470 4580202 4580459 - membrane protein gene gene4094 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20470 XM56_20475 XM56_20475 rnpA rnpA 4580423 4580782 - ribonuclease P protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus%3B this enzyme also cleaves other RNA substrates gene gene4095 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20475 XM56_20480 XM56_20480 rpmH rpmH 4580801 4580941 - 50S ribosomal protein L34 in Escherichia coli transcription of this gene is enhanced by polyamines gene gene4096 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20480 XM56_20485 XM56_20485 XM56_20485 571385 571763 + bacterial RNase P gene gene480 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20485 XM56_20490 XM56_20490 XM56_20490 138 392 + replication regulatory protein gene gene4097 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20490 XM56_20495 XM56_20495 XM56_20495 701 1567 + replication initiation protein gene gene4098 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20495 XM56_20500 XM56_20500 XM56_20500 2590 3135 - hypothetical protein gene gene4099 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20500 XM56_20505 XM56_20505 XM56_20505 3317 3784 + molecular chaperone Tir gene gene4100 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20505 XM56_20510 XM56_20510 XM56_20510 3792 5981 + protein kinase gene gene4101 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20510 XM56_20515 XM56_20515 XM56_20515 6462 7328 + Effector protein YopJ gene gene4102 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20515 XM56_20520 XM56_20520 XM56_20520 7852 8469 - conjugal transfer protein TraT gene gene4103 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20520 XM56_20525 XM56_20525 XM56_20525 8736 8927 - transposase gene gene4104 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20525 XM56_20530 XM56_20530 XM56_20530 9071 9619 - hypothetical protein gene gene4105 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20530 XM56_20535 XM56_20535 XM56_20535 10140 11108 + cysteine protease gene gene4106 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20535 XM56_20540 XM56_20540 XM56_20540 11108 11500 + molecular chaperone gene gene4107 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20540 XM56_20545 XM56_20545 XM56_20545 12268 12396 + transposase gene gene4108 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20545 XM56_20550 XM56_20550 XM56_20550 12390 13043 + integrase gene gene4109 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20550 XM56_20555 XM56_20555 XM56_20555 13400 13537 - hypothetical protein gene gene4110 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20555 XM56_20560 XM56_20560 XM56_20560 13560 13751 - hypothetical protein gene gene4111 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20560 XM56_20565 XM56_20565 XM56_20565 14461 14697 - hypothetical protein gene gene4112 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20565 XM56_20570 XM56_20570 XM56_20570 14898 16001 + membrane protein gene gene4113 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20570 XM56_20575 XM56_20575 XM56_20575 16044 16127 - transposase gene gene4114 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20575 XM56_20580 XM56_20580 XM56_20580 16314 16544 - transposase gene gene4115 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20580 XM56_20585 XM56_20585 XM56_20585 16775 17695 - hypothetical protein gene gene4116 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20585 XM56_20590 XM56_20590 XM56_20590 17714 18919 - hypothetical protein gene gene4117 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20590 XM56_20595 XM56_20595 XM56_20595 18897 19403 - Low calcium response locus protein H gene gene4118 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20595 XM56_20600 XM56_20600 XM56_20600 19406 20380 - virulence factor gene gene4119 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20600 XM56_20605 XM56_20605 XM56_20605 20382 20669 - Low calcium response locus protein G gene gene4120 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20605 XM56_20610 XM56_20610 XM56_20610 20711 21151 - Low calcium response locus protein R gene gene4121 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20610 XM56_20615 XM56_20615 XM56_20615 21148 23262 - Low calcium response locus protein D gene gene4122 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20615 XM56_20620 XM56_20620 XM56_20620 23249 23587 - molecular chaperone gene gene4123 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20620 XM56_20625 XM56_20625 XM56_20625 23590 23958 - preprotein translocase X gene gene4124 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20625 XM56_20630 XM56_20630 XM56_20630 23955 24326 - molecular chaperone gene gene4125 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20630 XM56_20635 XM56_20635 XM56_20635 24313 24591 - protein tyeA gene gene4126 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20635 XM56_20640 XM56_20640 XM56_20640 24572 25453 - membrane protein gene gene4127 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20640 XM56_20645 XM56_20645 fliI fliI 25651 26970 + ATP synthase involved in type III protein export during flagellum assembly gene gene4128 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20645 XM56_20650 XM56_20650 XM56_20650 26967 27431 + preprotein translocase O gene gene4129 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20650 XM56_20655 XM56_20655 XM56_20655 27431 28798 + preprotein translocase P gene gene4130 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20655 XM56_20660 XM56_20660 XM56_20660 28795 29718 + type III secretion system protein gene gene4131 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20660 XM56_20665 XM56_20665 ssaR ssaR 29715 30368 + type III secretion system protein SsaR part of a set of proteins involved in the infection of eukaryotic cells%3B in plant pathogens involved in the hypersensitivity response gene gene4132 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20665 XM56_20670 XM56_20670 XM56_20670 30370 30636 + preprotein translocase S gene gene4133 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20670 XM56_20675 XM56_20675 XM56_20675 30633 31418 + preprotein translocase T gene gene4134 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20675 XM56_20680 XM56_20680 XM56_20680 31418 32482 + preprotein translocase U gene gene4135 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20680 XM56_20685 XM56_20685 XM56_20685 33058 33453 + lipoprotein gene gene4136 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20685 XM56_20690 XM56_20690 XM56_20690 33577 34392 + AraC family transcriptional regulator gene gene4137 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20690 XM56_20695 XM56_20695 XM56_20695 34471 34569 + preprotein translocase A gene gene4138 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20695 XM56_20700 XM56_20700 XM56_20700 34795 35208 + molecular chaperone gene gene4139 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20700 XM56_20705 XM56_20705 XM56_20705 35214 37037 + secretin gene gene4140 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20705 XM56_20710 XM56_20710 XM56_20710 37034 38290 + preprotein translocase D gene gene4141 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20710 XM56_20715 XM56_20715 XM56_20715 38287 38487 + preprotein translocase subunit SecE gene gene4142 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20715 XM56_20720 XM56_20720 XM56_20720 38488 38751 + type III export protein pscF gene gene4143 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20720 XM56_20725 XM56_20725 XM56_20725 38753 39100 + preprotein translocase G gene gene4144 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20725 XM56_20730 XM56_20730 XM56_20730 39097 39594 + preprotein translocase H gene gene4145 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20730 XM56_20735 XM56_20735 XM56_20735 39604 39942 + preprotein translocase I gene gene4146 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20735 XM56_20740 XM56_20740 XM56_20740 39949 40683 + preproteins translocase J gene gene4147 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20740 XM56_20745 XM56_20745 XM56_20745 40686 41312 + preprotein translocase K gene gene4148 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20745 XM56_20750 XM56_20750 XM56_20750 41291 41929 + type III secretion system protein gene gene4149 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20750 XM56_20755 XM56_20755 XM56_20755 42148 42495 + preprotein translocase M gene gene4150 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20755 XM56_20760 XM56_20760 hypothetical protein hypothetical protein 42722 42891 + disrupted pseudogene gene4151 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20760 XM56_20765 XM56_20765 XM56_20765 43180 44586 + tyrosine protein phosphatase gene gene4152 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20765 XM56_20770 XM56_20770 XM56_20770 44814 45239 - yopH targeting protein gene gene4153 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20770 XM56_20775 XM56_20775 transposase transposase 45443 46068 - disrupted pseudogene gene4154 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20775 XM56_20780 XM56_20780 XM56_20780 46304 46615 - transposase gene gene4155 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20780 XM56_20785 XM56_20785 XM56_20785 46850 47242 - YopE regulator gene gene4156 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20785 XM56_20790 XM56_20790 XM56_20790 47510 48094 + membrane protein gene gene4157 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20790 XM56_20795 XM56_20795 XM56_20795 48234 48533 - plasmid stabilization protein gene gene4158 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20795 XM56_20800 XM56_20800 XM56_20800 48526 48768 - antitoxin gene gene4159 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20800 XM56_20805 XM56_20805 XM56_20805 49606 50571 - chromosome partitioning protein ParB gene gene4160 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20805 XM56_20810 XM56_20810 XM56_20810 50568 51734 - plasmid-partitioning protein SopA gene gene4161 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20810 XM56_20815 XM56_20815 hypothetical protein hypothetical protein 52170 52250 - disrupted pseudogene gene4162 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20815 XM56_20820 XM56_20820 XM56_20820 52350 52820 + recombinase gene gene4163 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20820 XM56_20825 XM56_20825 XM56_20825 52881 53099 - hypothetical protein gene gene4164 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20825 XM56_20830 XM56_20830 XM56_20830 53545 53673 + transposase gene gene4165 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20830 XM56_20835 XM56_20835 XM56_20835 53667 54320 + integrase gene gene4166 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20835 XM56_20840 XM56_20840 XM56_20840 54635 54985 + preprotein translocase M gene gene4167 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20840 XM56_20845 XM56_20845 transposase transposase 55158 56043 + disrupted pseudogene gene4168 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20845 XM56_20850 XM56_20850 XM56_20850 56246 56431 - integrase gene gene4169 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20850 XM56_20855 XM56_20855 XM56_20855 57245 58567 + adhesin YadA gene gene4170 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20855 XM56_20860 XM56_20860 XM56_20860 58643 59512 + multidrug DMT transporter permease gene gene4171 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20860 XM56_20865 XM56_20865 XM56_20865 59834 60286 - PprA gene gene4172 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20865 XM56_20870 XM56_20870 XM56_20870 60442 61293 - hypothetical protein gene gene4173 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20870 XM56_20875 XM56_20875 XM56_20875 61454 62035 + resolvase gene gene4174 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20875 XM56_20880 XM56_20880 XM56_20880 62053 62478 - arsenate reductase gene gene4175 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20880 XM56_20885 XM56_20885 XM56_20885 62491 63780 - arsenical pump membrane protein gene gene4176 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20885 XM56_20890 XM56_20890 XM56_20890 63826 64146 - arsenite transporter gene gene4177 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20890 XM56_20895 XM56_20895 XM56_20895 64232 64930 + arsenic resistance protein ArsH gene gene4178 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20895 XM56_20900 XM56_20900 XM56_20900 65093 65542 + conjugal transfer protein TraI gene gene4179 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20900 XM56_20905 XM56_20905 XM56_20905 65744 66397 - integrase gene gene4180 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20905 XM56_20910 XM56_20910 XM56_20910 66391 66519 - transposase gene gene4181 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20910 XM56_20915 XM56_20915 XM56_20915 66987 67199 + hypothetical protein gene gene4182 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20915 XM56_20920 XM56_20920 conjugal transfer protein TraX conjugal transfer protein TraX 67196 67496 + disrupted pseudogene gene4183 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20920 XM56_20925 XM56_20925 XM56_20925 67583 67900 + transposase gene gene4184 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20925 XM56_20930 XM56_20930 transposase transposase 68082 68776 + disrupted pseudogene gene4185 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20930 XM56_20935 XM56_20935 XM56_20935 68888 69433 + endonuclease gene gene4186 http://www.ncbi.nlm.nih.gov/gene/?term=XM56_20935