LC20_00001 SM00382 ATPases associated with a variety of cellular activities LC20_00001 SM00760 Bacterial dnaA protein helix-turn-helix domain LC20_00002 SM00480 DNA polymerase III beta subunit LC20_00005 SM00387 Histidine kinase-like ATPases LC20_00005 SM00433 TopoisomeraseII LC20_00023 SM00642 Alpha-amylase domain LC20_00039 SM00345 helix_turn_helix gluconate operon transcriptional repressor LC20_00042 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LC20_00042 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LC20_00042 SM01358 LC20_00042 LC20_00045 SM00926 Molybdopterin oxidoreductase Fe4S4 domain LC20_00054 SM00342 helix_turn_helix, arabinose operon control protein LC20_00060 SM00382 ATPases associated with a variety of cellular activities LC20_00062 SM00342 helix_turn_helix, arabinose operon control protein LC20_00070 SM00487 DEAD-like helicases superfamily LC20_00071 SM00255 Toll - interleukin 1 - resistance LC20_00098 SM00354 helix_turn _helix lactose operon repressor LC20_00113 SM00421 helix_turn_helix, Lux Regulon LC20_00113 SM00448 cheY-homologous receiver domain LC20_00114 SM00387 Histidine kinase-like ATPases LC20_00117 SM00912 haemagglutination activity domain LC20_00122 SM00912 haemagglutination activity domain LC20_00128 SM00382 ATPases associated with a variety of cellular activities LC20_00129 SM00382 ATPases associated with a variety of cellular activities LC20_00145 SM00028 Tetratricopeptide repeats LC20_00146 SM00052 Putative diguanylate phosphodiesterase LC20_00155 SM00052 Putative diguanylate phosphodiesterase LC20_00161 SM00710 Parallel beta-helix repeats LC20_00161 SM00869 Autotransporter beta-domain LC20_00165 SM01022 LC20_00165 LC20_00168 SM00235 Zinc-dependent metalloprotease LC20_00169 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LC20_00223 SM00354 helix_turn _helix lactose operon repressor LC20_00228 SM00859 Semialdehyde dehydrogenase, NAD binding domain LC20_00236 SM00642 Alpha-amylase domain LC20_00244 SM00420 helix_turn_helix, Deoxyribose operon repressor LC20_00244 SM01134 LC20_00244 LC20_00246 SM00450 Rhodanese Homology Domain LC20_00248 SM00421 helix_turn_helix, Lux Regulon LC20_00257 SM00899 LC20_00257 LC20_00262 SM00448 cheY-homologous receiver domain LC20_00262 SM00862 Transcriptional regulatory protein, C terminal LC20_00263 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LC20_00263 SM00387 Histidine kinase-like ATPases LC20_00263 SM00388 His Kinase A (phosphoacceptor) domain LC20_00266 SM00363 S4 RNA-binding domain LC20_00275 SM00965 Secretin and TonB N terminus short domain LC20_00295 SM00354 helix_turn _helix lactose operon repressor LC20_00298 SM00382 ATPases associated with a variety of cellular activities LC20_00302 SM00100 Cyclic nucleotide-monophosphate binding domain LC20_00302 SM00419 helix_turn_helix, cAMP Regulatory protein LC20_00310 SM00062 Bacterial periplasmic substrate-binding proteins LC20_00311 SM00382 ATPases associated with a variety of cellular activities LC20_00315 SM00382 ATPases associated with a variety of cellular activities LC20_00328 SM00838 Elongation factor G C-terminus LC20_00328 SM00889 Elongation factor G, domain IV LC20_00335 SM01403 LC20_00335 LC20_00339 SM01382 LC20_00339 LC20_00339 SM01383 LC20_00339 LC20_00342 SM00322 K homology RNA-binding domain LC20_00347 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. LC20_00359 SM00363 S4 RNA-binding domain LC20_00359 SM01390 LC20_00359 LC20_00360 SM00662 RNA polymerases D LC20_00363 SM00422 helix_turn_helix, mercury resistance LC20_00414 SM00530 Helix-turn-helix XRE-family like proteins LC20_00430 SM00346 helix_turn_helix isocitrate lyase regulation LC20_00431 SM01018 B12 binding domain LC20_00441 SM00382 ATPases associated with a variety of cellular activities LC20_00448 SM00563 Phosphate acyltransferases LC20_00468 SM00530 Helix-turn-helix XRE-family like proteins LC20_00476 SM00507 HNH nucleases LC20_00528 SM00829 Enoylreductase LC20_00529 SM00382 ATPases associated with a variety of cellular activities LC20_00530 SM01005 Alanine racemase, C-terminal domain LC20_00548 SM00382 ATPases associated with a variety of cellular activities LC20_00551 SM00062 Bacterial periplasmic substrate-binding proteins LC20_00556 SM00357 Cold shock protein domain LC20_00557 SM00357 Cold shock protein domain LC20_00559 SM00267 diguanylate cyclase LC20_00562 SM01040 BRO family, N-terminal domain LC20_00586 SM00878 Biotin carboxylase C-terminal domain LC20_00591 SM00829 Enoylreductase LC20_00603 SM00316 Ribosomal protein S1-like RNA-binding domain LC20_00629 SM00831 Cation transporter/ATPase, N-terminus LC20_00630 SM00354 helix_turn _helix lactose operon repressor LC20_00632 SM00642 Alpha-amylase domain LC20_00634 SM00460 Transglutaminase/protease-like homologues LC20_00647 SM00382 ATPases associated with a variety of cellular activities LC20_00653 SM00382 ATPases associated with a variety of cellular activities LC20_00662 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. LC20_00663 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. LC20_00675 SM00729 Elongator protein 3, MiaB family, Radical SAM LC20_00676 SM00073 Histidine Phosphotransfer domain LC20_00676 SM00091 PAS domain LC20_00676 SM00387 Histidine kinase-like ATPases LC20_00676 SM00388 His Kinase A (phosphoacceptor) domain LC20_00676 SM00448 cheY-homologous receiver domain LC20_00679 SM00749 bacterial OsmY and nodulation domain LC20_00694 SM00857 Resolvase, N terminal domain LC20_00697 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LC20_00699 SM00382 ATPases associated with a variety of cellular activities LC20_00700 SM00862 Transcriptional regulatory protein, C terminal LC20_00724 SM00857 Resolvase, N terminal domain LC20_00743 SM00382 ATPases associated with a variety of cellular activities LC20_00744 SM00823 Phosphopantetheine attachment site LC20_00744 SM00824 Thioesterase LC20_00745 SM00923 MbtH-like protein LC20_00784 SM00342 helix_turn_helix, arabinose operon control protein LC20_00787 SM00729 Elongator protein 3, MiaB family, Radical SAM LC20_00789 SM00563 Phosphate acyltransferases LC20_00790 SM00434 DNA Topoisomerase IV LC20_00793 SM00387 Histidine kinase-like ATPases LC20_00793 SM00433 TopoisomeraseII LC20_00809 SM01118 LC20_00809 LC20_00810 SM00287 Bacterial SH3 domain homologues LC20_00813 SM00905 Dihydroneopterin aldolase LC20_00814 SM01207 LC20_00814 LC20_00817 SM00400 zinc finger LC20_00817 SM00493 LC20_00817 LC20_00817 SM00766 DNA primase DnaG DnaB-binding LC20_00844 SM00885 D5 N terminal like LC20_00849 SM01040 BRO family, N-terminal domain LC20_00871 SM00869 Autotransporter beta-domain LC20_00878 SM00858 LC20_00878 LC20_00882 SM00345 helix_turn_helix gluconate operon transcriptional repressor LC20_00882 SM00895 LC20_00882 LC20_00906 SM00382 ATPases associated with a variety of cellular activities LC20_00906 SM01086 C-terminal, D2-small domain, of ClpB protein LC20_00941 SM00947 Carbonic anhydrase LC20_00943 SM00822 LC20_00943 LC20_00944 SM00829 Enoylreductase LC20_00946 SM00271 DnaJ molecular chaperone homology domain LC20_00947 SM00354 helix_turn _helix lactose operon repressor LC20_00952 SM00344 helix_turn_helix ASNC type LC20_00967 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LC20_00967 SM00387 Histidine kinase-like ATPases LC20_00967 SM00388 His Kinase A (phosphoacceptor) domain LC20_00968 SM00448 cheY-homologous receiver domain LC20_00968 SM00862 Transcriptional regulatory protein, C terminal LC20_00974 SM00822 LC20_00974 LC20_00982 SM01011 Aminopeptidase P, N-terminal domain LC20_00995 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LC20_00997 SM00861 Transketolase, pyrimidine binding domain LC20_01006 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor LC20_01007 SM00731 SprT homologues. LC20_01013 SM00732 Likely ribonuclease with RNase H fold. LC20_01021 SM01152 LC20_01021 LC20_01023 SM00729 Elongator protein 3, MiaB family, Radical SAM LC20_01031 SM00478 endonuclease III LC20_01031 SM00525 LC20_01031 LC20_01082 SM00862 Transcriptional regulatory protein, C terminal LC20_01085 SM00849 Metallo-beta-lactamase superfamily LC20_01091 SM00354 helix_turn _helix lactose operon repressor LC20_01093 SM00563 Phosphate acyltransferases LC20_01097 SM00927 DNA mismatch repair enzyme MutH LC20_01100 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. LC20_01113 SM00646 LC20_01113 LC20_01118 SM00925 MltA specific insert domain LC20_01126 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs LC20_01126 SM00475 5'-3' exonuclease LC20_01191 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. LC20_01202 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. LC20_01204 SM00935 Outer membrane protein (OmpH-like) LC20_01215 SM00977 TilS substrate C-terminal domain LC20_01218 SM01322 LC20_01218 LC20_01227 SM00382 ATPases associated with a variety of cellular activities LC20_01227 SM00930 LC20_01227 LC20_01230 SM00155 Phospholipase D. Active site motifs. LC20_01231 SM00881 CoA binding domain LC20_01232 SM01144 LC20_01232 LC20_01234 SM00967 RNA 2'-O ribose methyltransferase substrate binding LC20_01238 SM00347 helix_turn_helix multiple antibiotic resistance protein LC20_01254 SM00062 Bacterial periplasmic substrate-binding proteins LC20_01257 SM00382 ATPases associated with a variety of cellular activities LC20_01262 SM01007 Class II Aldolase and Adducin N-terminal domain LC20_01281 SM00900 LC20_01281 LC20_01302 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase LC20_01307 SM00345 helix_turn_helix gluconate operon transcriptional repressor LC20_01307 SM00866 LC20_01307 LC20_01330 SM00448 cheY-homologous receiver domain LC20_01330 SM00862 Transcriptional regulatory protein, C terminal LC20_01331 SM00091 PAS domain LC20_01331 SM00387 Histidine kinase-like ATPases LC20_01331 SM00388 His Kinase A (phosphoacceptor) domain LC20_01336 SM00642 Alpha-amylase domain LC20_01348 SM01323 LC20_01348 LC20_01358 SM00861 Transketolase, pyrimidine binding domain LC20_01361 SM00981 LC20_01361 LC20_01362 SM00448 cheY-homologous receiver domain LC20_01364 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LC20_01364 SM00387 Histidine kinase-like ATPases LC20_01364 SM00388 His Kinase A (phosphoacceptor) domain LC20_01388 SM00382 ATPases associated with a variety of cellular activities LC20_01388 SM00994 ClpX C4-type zinc finger LC20_01388 SM01086 C-terminal, D2-small domain, of ClpB protein LC20_01390 SM00382 ATPases associated with a variety of cellular activities LC20_01390 SM00464 Found in ATP-dependent protease La (LON) LC20_01391 SM00411 bacterial (prokaryotic) histone like domain LC20_01405 SM00344 helix_turn_helix ASNC type LC20_01406 SM00382 ATPases associated with a variety of cellular activities LC20_01407 SM00382 ATPases associated with a variety of cellular activities LC20_01408 SM00938 Nitrogen regulatory protein P-II LC20_01415 SM00634 Bacterial Ig-like domain (group 1) LC20_01423 SM00382 ATPases associated with a variety of cellular activities LC20_01448 SM00382 ATPases associated with a variety of cellular activities LC20_01450 SM00493 LC20_01450 LC20_01451 SM00387 Histidine kinase-like ATPases LC20_01476 SM00422 helix_turn_helix, mercury resistance LC20_01478 SM00244 prohibitin homologues LC20_01480 SM00822 LC20_01480 LC20_01482 SM00382 ATPases associated with a variety of cellular activities LC20_01487 SM01001 AIR carboxylase LC20_01490 SM00840 LC20_01490 LC20_01519 SM00862 Transcriptional regulatory protein, C terminal LC20_01528 SM00342 helix_turn_helix, arabinose operon control protein LC20_01533 SM00382 ATPases associated with a variety of cellular activities LC20_01579 SM01057 Eukaryotic-type carbonic anhydrase LC20_01584 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. LC20_01585 SM00382 ATPases associated with a variety of cellular activities LC20_01593 SM00421 helix_turn_helix, Lux Regulon LC20_01595 SM00357 Cold shock protein domain LC20_01598 SM00267 diguanylate cyclase LC20_01600 SM00729 Elongator protein 3, MiaB family, Radical SAM LC20_01603 SM00936 Penicillin-binding protein 5, C-terminal domain LC20_01616 SM00382 ATPases associated with a variety of cellular activities LC20_01620 SM00062 Bacterial periplasmic substrate-binding proteins LC20_01625 SM00116 Domain in cystathionine beta-synthase and other proteins. LC20_01625 SM01091 Transporter associated domain LC20_01628 SM00729 Elongator protein 3, MiaB family, Radical SAM LC20_01642 SM01081 Putative carbohydrate binding domain LC20_01646 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LC20_01654 SM00448 cheY-homologous receiver domain LC20_01654 SM00862 Transcriptional regulatory protein, C terminal LC20_01655 SM00387 Histidine kinase-like ATPases LC20_01655 SM00388 His Kinase A (phosphoacceptor) domain LC20_01669 SM00796 Allophanate hydrolase subunit 1 LC20_01670 SM00797 Allophanate hydrolase subunit 2 LC20_01682 SM00861 Transketolase, pyrimidine binding domain LC20_01685 SM00881 CoA binding domain LC20_01703 SM00855 Phosphoglycerate mutase family LC20_01710 SM00382 ATPases associated with a variety of cellular activities LC20_01771 SM00155 Phospholipase D. Active site motifs. LC20_01776 SM00382 ATPases associated with a variety of cellular activities LC20_01780 SM00869 Autotransporter beta-domain LC20_01784 SM00729 Elongator protein 3, MiaB family, Radical SAM LC20_01784 SM00876 Biotin and Thiamin Synthesis associated domain LC20_01788 SM00382 ATPases associated with a variety of cellular activities LC20_01790 SM00487 DEAD-like helicases superfamily LC20_01790 SM00490 helicase superfamily c-terminal domain LC20_01793 SM00729 Elongator protein 3, MiaB family, Radical SAM LC20_01800 SM00382 ATPases associated with a variety of cellular activities LC20_01803 SM00487 DEAD-like helicases superfamily LC20_01803 SM00490 helicase superfamily c-terminal domain LC20_01838 SM01118 LC20_01838 LC20_01842 SM00382 ATPases associated with a variety of cellular activities LC20_01854 SM00382 ATPases associated with a variety of cellular activities LC20_01855 SM00450 Rhodanese Homology Domain LC20_01863 SM00382 ATPases associated with a variety of cellular activities LC20_01874 SM00487 DEAD-like helicases superfamily LC20_01874 SM00488 LC20_01874 LC20_01874 SM00491 LC20_01874 LC20_01882 SM00903 Flavin reductase like domain LC20_01884 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) LC20_01884 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LC20_01885 SM00382 ATPases associated with a variety of cellular activities LC20_01887 SM00062 Bacterial periplasmic substrate-binding proteins LC20_01887 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. LC20_01894 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. LC20_01903 SM00382 ATPases associated with a variety of cellular activities LC20_01904 SM01276 LC20_01904 LC20_01906 SM00852 Probable molybdopterin binding domain LC20_01910 SM00382 ATPases associated with a variety of cellular activities LC20_01923 SM00354 helix_turn _helix lactose operon repressor LC20_01926 SM00382 ATPases associated with a variety of cellular activities LC20_01930 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. LC20_01930 SM00382 ATPases associated with a variety of cellular activities LC20_01931 SM00926 Molybdopterin oxidoreductase Fe4S4 domain LC20_01950 SM00919 Malic enzyme, NAD binding domain LC20_01950 SM01274 LC20_01950 LC20_01970 SM01091 Transporter associated domain LC20_01974 SM00382 ATPases associated with a variety of cellular activities LC20_01987 SM01350 LC20_01987 LC20_02011 SM00382 ATPases associated with a variety of cellular activities LC20_02020 SM00877 LC20_02020 LC20_02021 SM00877 LC20_02021 LC20_02027 SM00877 LC20_02027 LC20_02028 SM00877 LC20_02028 LC20_02031 SM00342 helix_turn_helix, arabinose operon control protein LC20_02049 SM00382 ATPases associated with a variety of cellular activities LC20_02054 SM00855 Phosphoglycerate mutase family LC20_02058 SM00260 Two component signalling adaptor domain LC20_02058 SM00448 cheY-homologous receiver domain LC20_02059 SM00382 ATPases associated with a variety of cellular activities LC20_02064 SM00387 Histidine kinase-like ATPases LC20_02065 SM00421 helix_turn_helix, Lux Regulon LC20_02065 SM00448 cheY-homologous receiver domain LC20_02066 SM00448 cheY-homologous receiver domain LC20_02067 SM00091 PAS domain LC20_02067 SM00387 Histidine kinase-like ATPases LC20_02069 SM00764 Citrate lyase ligase C-terminal domain LC20_02096 SM00062 Bacterial periplasmic substrate-binding proteins LC20_02096 SM00387 Histidine kinase-like ATPases LC20_02096 SM00388 His Kinase A (phosphoacceptor) domain LC20_02096 SM00448 cheY-homologous receiver domain LC20_02099 SM00421 helix_turn_helix, Lux Regulon LC20_02099 SM00448 cheY-homologous receiver domain LC20_02106 SM00563 Phosphate acyltransferases LC20_02109 SM00195 Dual specificity phosphatase, catalytic domain LC20_02116 SM00344 helix_turn_helix ASNC type LC20_02119 SM00829 Enoylreductase LC20_02120 SM01038 Beta galactosidase small chain LC20_02122 SM00354 helix_turn _helix lactose operon repressor LC20_02125 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LC20_02125 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LC20_02129 SM00831 Cation transporter/ATPase, N-terminus LC20_02136 SM00073 Histidine Phosphotransfer domain LC20_02136 SM00260 Two component signalling adaptor domain LC20_02136 SM00387 Histidine kinase-like ATPases LC20_02136 SM01231 LC20_02136 LC20_02137 SM00260 Two component signalling adaptor domain LC20_02139 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LC20_02139 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LC20_02139 SM00319 Homologues of the ligand binding domain of Tar LC20_02140 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LC20_02140 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LC20_02140 SM00319 Homologues of the ligand binding domain of Tar LC20_02141 SM00138 Methyltransferase, chemotaxis proteins LC20_02144 SM00448 cheY-homologous receiver domain LC20_02155 SM00858 LC20_02155 LC20_02178 SM00382 ATPases associated with a variety of cellular activities LC20_02187 SM00478 endonuclease III LC20_02188 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. LC20_02202 SM00062 Bacterial periplasmic substrate-binding proteins LC20_02202 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. LC20_02204 SM00382 ATPases associated with a variety of cellular activities LC20_02218 SM00530 Helix-turn-helix XRE-family like proteins LC20_02222 SM00342 helix_turn_helix, arabinose operon control protein LC20_02230 SM00642 Alpha-amylase domain LC20_02235 SM00421 helix_turn_helix, Lux Regulon LC20_02235 SM00448 cheY-homologous receiver domain LC20_02237 SM00465 GIY-YIG type nucleases (URI domain) LC20_02249 SM00530 Helix-turn-helix XRE-family like proteins LC20_02254 SM00382 ATPases associated with a variety of cellular activities LC20_02271 SM00869 Autotransporter beta-domain LC20_02305 SM00448 cheY-homologous receiver domain LC20_02306 SM00387 Histidine kinase-like ATPases LC20_02307 SM00420 helix_turn_helix, Deoxyribose operon repressor LC20_02307 SM01134 LC20_02307 LC20_02309 SM01007 Class II Aldolase and Adducin N-terminal domain LC20_02337 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LC20_02337 SM00387 Histidine kinase-like ATPases LC20_02343 SM00345 helix_turn_helix gluconate operon transcriptional repressor LC20_02357 SM00345 helix_turn_helix gluconate operon transcriptional repressor LC20_02357 SM00866 LC20_02357 LC20_02367 SM00257 Lysin motif LC20_02379 SM00420 helix_turn_helix, Deoxyribose operon repressor LC20_02379 SM01134 LC20_02379 LC20_02381 SM00869 Autotransporter beta-domain LC20_02392 SM01400 LC20_02392 LC20_02396 SM00937 LC20_02396 LC20_02405 SM00481 DNA polymerase alpha chain like domain LC20_02422 SM00836 DALR anticodon binding domain LC20_02422 SM01016 Arginyl tRNA synthetase N terminal dom LC20_02445 SM00278 Helix-hairpin-helix DNA-binding motif class 1 LC20_02446 SM00382 ATPases associated with a variety of cellular activities LC20_02449 SM00382 ATPases associated with a variety of cellular activities LC20_02452 SM00257 Lysin motif LC20_02463 SM00487 DEAD-like helicases superfamily LC20_02463 SM00491 LC20_02463 LC20_02471 SM00341 Helicase and RNase D C-terminal LC20_02471 SM00474 3'-5' exonuclease LC20_02490 SM00869 Autotransporter beta-domain LC20_02497 SM00345 helix_turn_helix gluconate operon transcriptional repressor LC20_02502 SM01005 Alanine racemase, C-terminal domain LC20_02504 SM00052 Putative diguanylate phosphodiesterase LC20_02504 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. LC20_02504 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) LC20_02504 SM00091 PAS domain LC20_02504 SM00267 diguanylate cyclase LC20_02512 SM00763 PrkA AAA domain LC20_02517 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LC20_02523 SM00870 LC20_02523 LC20_02528 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain LC20_02528 SM00437 Bacterial DNA topoisomerase I DNA-binding domain LC20_02528 SM00493 LC20_02528 LC20_02537 SM00448 cheY-homologous receiver domain LC20_02538 SM00984 UDP binding domain LC20_02539 SM00528 Domain in histone-like proteins of HNS family LC20_02553 SM00382 ATPases associated with a variety of cellular activities LC20_02554 SM00382 ATPases associated with a variety of cellular activities LC20_02556 SM00155 Phospholipase D. Active site motifs. LC20_02570 SM00749 bacterial OsmY and nodulation domain LC20_02579 SM00481 DNA polymerase alpha chain like domain LC20_02583 SM00869 Autotransporter beta-domain LC20_02585 SM00421 helix_turn_helix, Lux Regulon LC20_02588 SM00634 Bacterial Ig-like domain (group 1) LC20_02591 SM00421 helix_turn_helix, Lux Regulon LC20_02593 SM00857 Resolvase, N terminal domain LC20_02602 SM00363 S4 RNA-binding domain LC20_02604 SM00822 LC20_02604 LC20_02607 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain LC20_02607 SM00437 Bacterial DNA topoisomerase I DNA-binding domain LC20_02607 SM00493 LC20_02607 LC20_02625 SM00028 Tetratricopeptide repeats LC20_02633 SM00857 Resolvase, N terminal domain LC20_02636 SM00530 Helix-turn-helix XRE-family like proteins LC20_02645 SM01007 Class II Aldolase and Adducin N-terminal domain LC20_02647 SM00420 helix_turn_helix, Deoxyribose operon repressor LC20_02647 SM01134 LC20_02647 LC20_02657 SM00478 endonuclease III LC20_02657 SM00525 LC20_02657 LC20_02659 SM00900 LC20_02659 LC20_02661 SM00342 helix_turn_helix, arabinose operon control protein LC20_02669 SM00382 ATPases associated with a variety of cellular activities LC20_02672 SM00382 ATPases associated with a variety of cellular activities LC20_02679 SM00382 ATPases associated with a variety of cellular activities LC20_02681 SM00342 helix_turn_helix, arabinose operon control protein LC20_02688 SM00354 helix_turn _helix lactose operon repressor LC20_02731 SM00344 helix_turn_helix ASNC type LC20_02734 SM00062 Bacterial periplasmic substrate-binding proteins LC20_02753 SM00862 Transcriptional regulatory protein, C terminal LC20_02778 SM00098 Alkaline phosphatase homologues LC20_02779 SM00822 LC20_02779 LC20_02781 SM00871 Bacterial transcription activator, effector binding domain LC20_02785 SM00100 Cyclic nucleotide-monophosphate binding domain LC20_02785 SM00419 helix_turn_helix, cAMP Regulatory protein LC20_02797 SM01002 Alanine dehydrogenase/PNT, C-terminal domain LC20_02797 SM01003 Alanine dehydrogenase/PNT, N-terminal domain LC20_02802 SM00448 cheY-homologous receiver domain LC20_02802 SM00862 Transcriptional regulatory protein, C terminal LC20_02803 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LC20_02803 SM00387 Histidine kinase-like ATPases LC20_02803 SM00388 His Kinase A (phosphoacceptor) domain LC20_02807 SM00020 Trypsin-like serine protease LC20_02809 SM00530 Helix-turn-helix XRE-family like proteins LC20_02834 SM00421 helix_turn_helix, Lux Regulon LC20_02844 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain LC20_02846 SM00091 PAS domain LC20_02846 SM00382 ATPases associated with a variety of cellular activities LC20_02848 SM00953 LC20_02848 LC20_02856 SM00382 ATPases associated with a variety of cellular activities LC20_02862 SM00382 ATPases associated with a variety of cellular activities LC20_02863 SM00382 ATPases associated with a variety of cellular activities LC20_02891 SM00363 S4 RNA-binding domain LC20_02898 SM00347 helix_turn_helix multiple antibiotic resistance protein LC20_02909 SM00479 LC20_02909 LC20_02932 SM00382 ATPases associated with a variety of cellular activities LC20_02965 SM00382 ATPases associated with a variety of cellular activities LC20_02971 SM00411 bacterial (prokaryotic) histone like domain LC20_02977 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain LC20_03010 SM00382 ATPases associated with a variety of cellular activities LC20_03016 SM00644 LC20_03016 LC20_03017 SM00346 helix_turn_helix isocitrate lyase regulation LC20_03027 SM00945 ProQ/FINO family LC20_03028 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. LC20_03036 SM00972 Spore Coat Protein U domain LC20_03037 SM00972 Spore Coat Protein U domain LC20_03038 SM00972 Spore Coat Protein U domain LC20_03043 SM00972 Spore Coat Protein U domain LC20_03044 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) LC20_03044 SM00091 PAS domain LC20_03044 SM00267 diguanylate cyclase LC20_03046 SM01022 LC20_03046 LC20_03055 SM00363 S4 RNA-binding domain LC20_03097 SM00470 ParB-like nuclease domain LC20_03119 SM00530 Helix-turn-helix XRE-family like proteins LC20_03138 SM00479 LC20_03138 LC20_03141 SM01022 LC20_03141 LC20_03143 SM00487 DEAD-like helicases superfamily LC20_03143 SM00490 helicase superfamily c-terminal domain LC20_03154 SM00116 Domain in cystathionine beta-synthase and other proteins. LC20_03154 SM01091 Transporter associated domain LC20_03164 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) LC20_03164 SM00091 PAS domain LC20_03164 SM00267 diguanylate cyclase LC20_03180 SM00342 helix_turn_helix, arabinose operon control protein LC20_03185 SM00382 ATPases associated with a variety of cellular activities LC20_03186 SM00090 RIO-like kinase LC20_03187 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) LC20_03187 SM00091 PAS domain LC20_03187 SM00267 diguanylate cyclase LC20_03191 SM00342 helix_turn_helix, arabinose operon control protein LC20_03195 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain LC20_03196 SM00345 helix_turn_helix gluconate operon transcriptional repressor LC20_03196 SM00895 LC20_03196 LC20_03199 SM00858 LC20_03199 LC20_03210 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) LC20_03210 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LC20_03212 SM00354 helix_turn _helix lactose operon repressor LC20_03213 SM00640 Glycosyl hydrolases family 32 LC20_03271 SM00470 ParB-like nuclease domain LC20_03306 SM01329 LC20_03306 LC20_03313 SM00448 cheY-homologous receiver domain LC20_03313 SM00862 Transcriptional regulatory protein, C terminal LC20_03314 SM00387 Histidine kinase-like ATPases LC20_03314 SM00388 His Kinase A (phosphoacceptor) domain LC20_03315 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. LC20_03321 SM00382 ATPases associated with a variety of cellular activities LC20_03323 SM00487 DEAD-like helicases superfamily LC20_03323 SM00490 helicase superfamily c-terminal domain LC20_03323 SM00982 LC20_03323 LC20_03323 SM01058 CarD-like/TRCF domain LC20_03344 SM00825 Beta-ketoacyl synthase LC20_03346 SM00822 LC20_03346 LC20_03347 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. LC20_03353 SM00363 S4 RNA-binding domain LC20_03363 SM00421 helix_turn_helix, Lux Regulon LC20_03368 SM00450 Rhodanese Homology Domain LC20_03384 SM01091 Transporter associated domain LC20_03388 SM00421 helix_turn_helix, Lux Regulon LC20_03395 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase LC20_03396 SM00992 Hemimethylated DNA-binding protein YccV like LC20_03397 SM00881 CoA binding domain LC20_03401 SM00851 MGS-like domain LC20_03414 SM00825 Beta-ketoacyl synthase LC20_03418 SM00382 ATPases associated with a variety of cellular activities LC20_03419 SM00981 LC20_03419 LC20_03435 SM00857 Resolvase, N terminal domain LC20_03440 SM00857 Resolvase, N terminal domain LC20_03452 SM00052 Putative diguanylate phosphodiesterase LC20_03453 SM00849 Metallo-beta-lactamase superfamily LC20_03465 SM00357 Cold shock protein domain LC20_03466 SM00357 Cold shock protein domain LC20_03467 SM01150 LC20_03467 LC20_03470 SM00382 ATPases associated with a variety of cellular activities LC20_03471 SM00849 Metallo-beta-lactamase superfamily LC20_03473 SM00411 bacterial (prokaryotic) histone like domain LC20_03474 SM00316 Ribosomal protein S1-like RNA-binding domain LC20_03479 SM00870 LC20_03479 LC20_03492 SM00843 LC20_03492 LC20_03493 SM00344 helix_turn_helix ASNC type LC20_03495 SM00382 ATPases associated with a variety of cellular activities LC20_03497 SM00382 ATPases associated with a variety of cellular activities LC20_03499 SM00316 Ribosomal protein S1-like RNA-binding domain LC20_03501 SM00382 ATPases associated with a variety of cellular activities LC20_03501 SM01086 C-terminal, D2-small domain, of ClpB protein LC20_03503 SM00357 Cold shock protein domain LC20_03504 SM00382 ATPases associated with a variety of cellular activities LC20_03525 SM00382 ATPases associated with a variety of cellular activities LC20_03526 SM00062 Bacterial periplasmic substrate-binding proteins LC20_03526 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. LC20_03531 SM00062 Bacterial periplasmic substrate-binding proteins LC20_03531 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. LC20_03537 SM00382 ATPases associated with a variety of cellular activities LC20_03545 SM00014 Acid phosphatase homologues LC20_03546 SM01133 LC20_03546 LC20_03548 SM00420 helix_turn_helix, Deoxyribose operon repressor LC20_03548 SM01134 LC20_03548 LC20_03555 SM00936 Penicillin-binding protein 5, C-terminal domain LC20_03556 SM00116 Domain in cystathionine beta-synthase and other proteins. LC20_03559 SM00382 ATPases associated with a variety of cellular activities LC20_03559 SM00930 LC20_03559 LC20_03568 SM00382 ATPases associated with a variety of cellular activities LC20_03577 SM00518 AP endonuclease family 2 LC20_03587 SM00841 Elongation factor P, C-terminal LC20_03587 SM01185 LC20_03587 LC20_03590 SM00345 helix_turn_helix gluconate operon transcriptional repressor LC20_03590 SM00895 LC20_03590 LC20_03592 SM00833 Cobalamin synthesis protein cobW C-terminal domain LC20_03593 SM00014 Acid phosphatase homologues LC20_03596 SM00052 Putative diguanylate phosphodiesterase LC20_03603 SM00382 ATPases associated with a variety of cellular activities LC20_03609 SM00363 S4 RNA-binding domain LC20_03611 SM00487 DEAD-like helicases superfamily LC20_03611 SM00490 helicase superfamily c-terminal domain LC20_03626 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LC20_03626 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LC20_03635 SM00387 Histidine kinase-like ATPases LC20_03636 SM00421 helix_turn_helix, Lux Regulon LC20_03636 SM00448 cheY-homologous receiver domain LC20_03648 SM00434 DNA Topoisomerase IV LC20_03655 SM00852 Probable molybdopterin binding domain LC20_03659 SM01060 LC20_03659 LC20_03661 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain LC20_03690 SM00926 Molybdopterin oxidoreductase Fe4S4 domain LC20_03690 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LC20_03691 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LC20_03700 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. LC20_03709 SM00354 helix_turn _helix lactose operon repressor LC20_03716 SM00052 Putative diguanylate phosphodiesterase LC20_03719 SM00382 ATPases associated with a variety of cellular activities LC20_03722 SM00062 Bacterial periplasmic substrate-binding proteins LC20_03732 SM00859 Semialdehyde dehydrogenase, NAD binding domain LC20_03734 SM00342 helix_turn_helix, arabinose operon control protein LC20_03740 SM00345 helix_turn_helix gluconate operon transcriptional repressor LC20_03750 SM00354 helix_turn _helix lactose operon repressor LC20_03762 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) LC20_03762 SM00091 PAS domain LC20_03762 SM00267 diguanylate cyclase LC20_03763 SM00825 Beta-ketoacyl synthase LC20_03772 SM00463 Small MutS-related domain LC20_03791 SM00382 ATPases associated with a variety of cellular activities LC20_03806 SM00354 helix_turn _helix lactose operon repressor LC20_03807 SM00867 YceI-like domain LC20_03812 SM00382 ATPases associated with a variety of cellular activities LC20_03824 SM00382 ATPases associated with a variety of cellular activities LC20_03831 SM01061 CAT RNA binding domain LC20_03833 SM00926 Molybdopterin oxidoreductase Fe4S4 domain LC20_03849 SM00387 Histidine kinase-like ATPases LC20_03850 SM00448 cheY-homologous receiver domain LC20_03850 SM00850 LytTr DNA-binding domain LC20_03873 SM00771 ZipA, C-terminal domain (FtsZ-binding) LC20_03913 SM01252 LC20_03913 LC20_03922 SM00530 Helix-turn-helix XRE-family like proteins LC20_03925 SM00994 ClpX C4-type zinc finger LC20_03950 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LC20_03950 SM00387 Histidine kinase-like ATPases LC20_03950 SM00388 His Kinase A (phosphoacceptor) domain LC20_03951 SM00448 cheY-homologous receiver domain LC20_03951 SM00862 Transcriptional regulatory protein, C terminal LC20_03954 SM00382 ATPases associated with a variety of cellular activities LC20_03956 SM00382 ATPases associated with a variety of cellular activities LC20_03968 SM01130 LC20_03968 LC20_03973 SM00822 LC20_03973 LC20_03974 SM00450 Rhodanese Homology Domain LC20_03980 SM00382 ATPases associated with a variety of cellular activities LC20_03991 SM00926 Molybdopterin oxidoreductase Fe4S4 domain LC20_03994 SM00421 helix_turn_helix, Lux Regulon LC20_03994 SM00448 cheY-homologous receiver domain LC20_04014 SM01130 LC20_04014 LC20_04028 SM00382 ATPases associated with a variety of cellular activities LC20_04036 SM00052 Putative diguanylate phosphodiesterase LC20_04036 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) LC20_04036 SM00091 PAS domain LC20_04036 SM00267 diguanylate cyclase LC20_04056 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LC20_04056 SM00387 Histidine kinase-like ATPases LC20_04056 SM00388 His Kinase A (phosphoacceptor) domain LC20_04057 SM00448 cheY-homologous receiver domain LC20_04057 SM00862 Transcriptional regulatory protein, C terminal LC20_04069 SM00420 helix_turn_helix, Deoxyribose operon repressor LC20_04069 SM01134 LC20_04069 LC20_04070 SM00116 Domain in cystathionine beta-synthase and other proteins. LC20_04079 SM00116 Domain in cystathionine beta-synthase and other proteins. LC20_04079 SM01240 LC20_04079 LC20_04084 SM00382 ATPases associated with a variety of cellular activities LC20_04086 SM00564 beta-propeller repeat LC20_04090 SM00530 Helix-turn-helix XRE-family like proteins LC20_04091 SM00028 Tetratricopeptide repeats LC20_04093 SM00562 LC20_04093 LC20_04095 SM00247 Beta/gamma crystallins LC20_04098 SM01359 LC20_04098 LC20_04098 SM01360 LC20_04098 LC20_04107 SM00271 DnaJ molecular chaperone homology domain LC20_04128 SM00938 Nitrogen regulatory protein P-II LC20_04130 SM00382 ATPases associated with a variety of cellular activities LC20_04130 SM00448 cheY-homologous receiver domain LC20_04132 SM00387 Histidine kinase-like ATPases LC20_04132 SM00388 His Kinase A (phosphoacceptor) domain LC20_04135 SM01211 LC20_04135 LC20_04136 SM00062 Bacterial periplasmic substrate-binding proteins LC20_04152 SM00358 Double-stranded RNA binding motif LC20_04152 SM00535 Ribonuclease III family LC20_04164 SM00487 DEAD-like helicases superfamily LC20_04164 SM00490 helicase superfamily c-terminal domain LC20_04165 SM00248 ankyrin repeats LC20_04170 SM00986 Uracil DNA glycosylase superfamily LC20_04170 SM00987 UreE urease accessory protein, C-terminal domain LC20_04227 SM00450 Rhodanese Homology Domain LC20_04228 SM00342 helix_turn_helix, arabinose operon control protein LC20_04241 SM00382 ATPases associated with a variety of cellular activities LC20_04245 SM00479 LC20_04245 LC20_04248 SM00849 Metallo-beta-lactamase superfamily LC20_04249 SM00257 Lysin motif LC20_04255 SM00382 ATPases associated with a variety of cellular activities LC20_04255 SM01086 C-terminal, D2-small domain, of ClpB protein LC20_04257 SM00363 S4 RNA-binding domain LC20_04260 SM00830 Chorismate mutase type II LC20_04261 SM00830 Chorismate mutase type II LC20_04263 SM00448 cheY-homologous receiver domain LC20_04263 SM00850 LytTr DNA-binding domain LC20_04271 SM00382 ATPases associated with a variety of cellular activities LC20_04271 SM00962 SRP54-type protein, GTPase domain LC20_04271 SM00963 SRP54-type protein, helical bundle domain LC20_04273 SM01091 Transporter associated domain LC20_04282 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain LC20_04284 SM00382 ATPases associated with a variety of cellular activities LC20_04291 SM00861 Transketolase, pyrimidine binding domain LC20_04294 SM00382 ATPases associated with a variety of cellular activities LC20_04300 SM00926 Molybdopterin oxidoreductase Fe4S4 domain LC20_04301 SM01007 Class II Aldolase and Adducin N-terminal domain LC20_04302 SM00420 helix_turn_helix, Deoxyribose operon repressor LC20_04302 SM01134 LC20_04302 LC20_04304 SM00382 ATPases associated with a variety of cellular activities LC20_04318 SM00382 ATPases associated with a variety of cellular activities LC20_04321 SM01012 LC20_04321 LC20_04332 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor LC20_04333 SM00838 Elongation factor G C-terminus LC20_04333 SM00889 Elongation factor G, domain IV LC20_04336 SM00530 Helix-turn-helix XRE-family like proteins LC20_04338 SM00382 ATPases associated with a variety of cellular activities LC20_04341 SM00062 Bacterial periplasmic substrate-binding proteins LC20_04350 SM00382 ATPases associated with a variety of cellular activities LC20_04351 SM00382 ATPases associated with a variety of cellular activities LC20_04356 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain LC20_04359 SM01235 LC20_04359 LC20_04361 SM00062 Bacterial periplasmic substrate-binding proteins LC20_04362 SM00822 LC20_04362 LC20_04365 SM00825 Beta-ketoacyl synthase LC20_04367 SM00382 ATPases associated with a variety of cellular activities LC20_04369 SM00382 ATPases associated with a variety of cellular activities LC20_04384 SM00533 DNA-binding domain of DNA mismatch repair MUTS family LC20_04384 SM00534 ATPase domain of DNA mismatch repair MUTS family LC20_04387 SM00257 Lysin motif LC20_04395 SM00062 Bacterial periplasmic substrate-binding proteins LC20_04395 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. LC20_04397 SM00382 ATPases associated with a variety of cellular activities LC20_04412 SM01192 LC20_04412 LC20_04412 SM01193 LC20_04412 LC20_04417 SM00954 Region found in RelA / SpoT proteins LC20_04419 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LC20_04419 SM00387 Histidine kinase-like ATPases LC20_04419 SM00388 His Kinase A (phosphoacceptor) domain LC20_04419 SM00448 cheY-homologous receiver domain LC20_04420 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. LC20_04421 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. LC20_04432 SM00382 ATPases associated with a variety of cellular activities LC20_04446 SM00382 ATPases associated with a variety of cellular activities LC20_04447 SM00947 Carbonic anhydrase LC20_04460 SM00342 helix_turn_helix, arabinose operon control protein LC20_04472 SM00345 helix_turn_helix gluconate operon transcriptional repressor LC20_04472 SM00895 LC20_04472 LC20_04478 SM00634 Bacterial Ig-like domain (group 1) LC20_04482 SM00644 LC20_04482 LC20_04488 SM01240 LC20_04488 LC20_04494 SM00957 SecA DEAD-like domain LC20_04494 SM00958 SecA preprotein cross-linking domain LC20_04498 SM00864 Tubulin/FtsZ family, GTPase domain LC20_04498 SM00865 Tubulin/FtsZ family, C-terminal domain LC20_04499 SM00842 Cell division protein FtsA LC20_04516 SM00354 helix_turn _helix lactose operon repressor LC20_04523 SM00917 LeuA allosteric (dimerisation) domain LC20_04524 SM01329 LC20_04524 LC20_04538 SM00382 ATPases associated with a variety of cellular activities LC20_04542 SM00487 DEAD-like helicases superfamily LC20_04542 SM00490 helicase superfamily c-terminal domain LC20_04545 SM00271 DnaJ molecular chaperone homology domain LC20_04549 SM00650 Ribosomal RNA adenine dimethylases LC20_04557 SM00851 MGS-like domain LC20_04557 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LC20_04558 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain LC20_04565 SM00904 Riboflavin kinase LC20_04569 SM00271 DnaJ molecular chaperone homology domain LC20_04574 SM00852 Probable molybdopterin binding domain LC20_04582 SM00448 cheY-homologous receiver domain LC20_04582 SM00862 Transcriptional regulatory protein, C terminal LC20_04584 SM00342 helix_turn_helix, arabinose operon control protein LC20_04584 SM00871 Bacterial transcription activator, effector binding domain LC20_04585 SM00855 Phosphoglycerate mutase family LC20_04589 SM00831 Cation transporter/ATPase, N-terminus LC20_04591 SM00267 diguanylate cyclase LC20_04593 SM00382 ATPases associated with a variety of cellular activities LC20_04595 SM00829 Enoylreductase LC20_04596 SM00530 Helix-turn-helix XRE-family like proteins LC20_04599 SM00382 ATPases associated with a variety of cellular activities LC20_04604 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain LC20_04605 SM01133 LC20_04605 LC20_04610 SM00749 bacterial OsmY and nodulation domain LC20_04621 SM00267 diguanylate cyclase LC20_04627 SM00354 helix_turn _helix lactose operon repressor LC20_04628 SM00091 PAS domain LC20_04643 SM01120 LC20_04643 LC20_04665 SM00382 ATPases associated with a variety of cellular activities LC20_04669 SM01133 LC20_04669 LC20_04675 SM00421 helix_turn_helix, Lux Regulon LC20_04691 SM00382 ATPases associated with a variety of cellular activities LC20_04692 SM00382 ATPases associated with a variety of cellular activities LC20_04701 SM00345 helix_turn_helix gluconate operon transcriptional repressor LC20_04701 SM00866 LC20_04701 LC20_04706 SM00382 ATPases associated with a variety of cellular activities LC20_04707 SM00382 ATPases associated with a variety of cellular activities LC20_04709 SM00072 Guanylate kinase homologues. LC20_04711 SM00859 Semialdehyde dehydrogenase, NAD binding domain LC20_04714 SM00382 ATPases associated with a variety of cellular activities LC20_04732 SM00487 DEAD-like helicases superfamily LC20_04732 SM00490 helicase superfamily c-terminal domain LC20_04733 SM00028 Tetratricopeptide repeats LC20_04734 SM00316 Ribosomal protein S1-like RNA-binding domain LC20_04734 SM00322 K homology RNA-binding domain LC20_04735 SM01387 LC20_04735 LC20_04739 SM00316 Ribosomal protein S1-like RNA-binding domain LC20_04739 SM00322 K homology RNA-binding domain LC20_04748 SM01103 LC20_04748 LC20_04751 SM00448 cheY-homologous receiver domain LC20_04751 SM00862 Transcriptional regulatory protein, C terminal LC20_04752 SM00387 Histidine kinase-like ATPases LC20_04752 SM00388 His Kinase A (phosphoacceptor) domain LC20_04766 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LC20_04766 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LC20_04773 SM01091 Transporter associated domain LC20_04792 SM00967 RNA 2'-O ribose methyltransferase substrate binding LC20_04793 SM00316 Ribosomal protein S1-like RNA-binding domain LC20_04793 SM00357 Cold shock protein domain LC20_04793 SM00955 LC20_04793 LC20_04795 SM00788 Adenylosuccinate synthetase LC20_04800 SM00244 prohibitin homologues LC20_04801 SM00244 prohibitin homologues LC20_04805 SM00853 MutL C terminal dimerisation domain LC20_04805 SM01340 LC20_04805 LC20_04806 SM00257 Lysin motif LC20_04806 SM00646 LC20_04806 LC20_04813 SM00479 LC20_04813 LC20_04826 SM00841 Elongation factor P, C-terminal LC20_04826 SM01185 LC20_04826 LC20_04830 SM00883 Chaperonin 10 Kd subunit LC20_04838 SM00926 Molybdopterin oxidoreductase Fe4S4 domain LC20_04852 SM00729 Elongator protein 3, MiaB family, Radical SAM LC20_04861 SM00382 ATPases associated with a variety of cellular activities LC20_04862 SM00345 helix_turn_helix gluconate operon transcriptional repressor LC20_04864 SM00450 Rhodanese Homology Domain LC20_04893 SM00382 ATPases associated with a variety of cellular activities LC20_04904 SM00342 helix_turn_helix, arabinose operon control protein LC20_04918 SM00387 Histidine kinase-like ATPases LC20_04918 SM00388 His Kinase A (phosphoacceptor) domain LC20_04918 SM00448 cheY-homologous receiver domain LC20_04919 SM00421 helix_turn_helix, Lux Regulon LC20_04919 SM00448 cheY-homologous receiver domain LC20_04926 SM00798 AICARFT/IMPCHase bienzyme LC20_04926 SM00851 MGS-like domain LC20_04927 SM01209 LC20_04927 LC20_04927 SM01210 LC20_04927 LC20_04929 SM00411 bacterial (prokaryotic) histone like domain LC20_04940 SM00876 Biotin and Thiamin Synthesis associated domain LC20_04941 SM00663 RNA polymerase I subunit A N-terminus LC20_04947 SM00649 Ribosomal protein L11/L12 LC20_04948 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. LC20_04948 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. LC20_04968 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. LC20_04969 SM01004 Delta-aminolevulinic acid dehydratase LC20_04991 SM00382 ATPases associated with a variety of cellular activities LC20_05005 SM00382 ATPases associated with a variety of cellular activities LC20_05006 SM00382 ATPases associated with a variety of cellular activities LC20_05014 SM00382 ATPases associated with a variety of cellular activities LC20_05015 SM00382 ATPases associated with a variety of cellular activities LC20_05015 SM00962 SRP54-type protein, GTPase domain LC20_05015 SM00963 SRP54-type protein, helical bundle domain LC20_05037 SM00341 Helicase and RNase D C-terminal LC20_05037 SM00487 DEAD-like helicases superfamily LC20_05037 SM00490 helicase superfamily c-terminal domain LC20_05037 SM00956 LC20_05037 LC20_05053 SM01219 LC20_05053 LC20_05071 SM00984 UDP binding domain LC20_05076 SM00357 Cold shock protein domain LC20_05076 SM00382 ATPases associated with a variety of cellular activities LC20_05076 SM00959 Rho termination factor, N-terminal domain LC20_05078 SM00487 DEAD-like helicases superfamily LC20_05078 SM00490 helicase superfamily c-terminal domain LC20_05100 SM00530 Helix-turn-helix XRE-family like proteins LC20_05103 SM00857 Resolvase, N terminal domain LC20_05110 SM00382 ATPases associated with a variety of cellular activities LC20_05124 SM00382 ATPases associated with a variety of cellular activities LC20_05134 SM00859 Semialdehyde dehydrogenase, NAD binding domain LC20_05147 SM00487 DEAD-like helicases superfamily LC20_05147 SM00490 helicase superfamily c-terminal domain LC20_05148 SM00354 helix_turn _helix lactose operon repressor LC20_05151 SM00382 ATPases associated with a variety of cellular activities LC20_05151 SM01086 C-terminal, D2-small domain, of ClpB protein LC20_05169 SM00448 cheY-homologous receiver domain LC20_05169 SM00862 Transcriptional regulatory protein, C terminal LC20_05170 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LC20_05170 SM00387 Histidine kinase-like ATPases LC20_05170 SM00388 His Kinase A (phosphoacceptor) domain LC20_05171 SM00342 helix_turn_helix, arabinose operon control protein LC20_05173 SM00971 Serine acetyltransferase, N-terminal LC20_05177 SM00450 Rhodanese Homology Domain LC20_05181 SM00829 Enoylreductase LC20_05191 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain LC20_05191 SM01232 LC20_05191 LC20_05206 SM00493 LC20_05206 LC20_05206 SM00778 Zinc-binding domain of primase-helicase LC20_05222 SM00532 Ligase N family LC20_05224 SM00072 Guanylate kinase homologues. LC20_05225 SM01409 LC20_05225 LC20_05226 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. LC20_05226 SM00954 Region found in RelA / SpoT proteins LC20_05228 SM00487 DEAD-like helicases superfamily LC20_05228 SM00490 helicase superfamily c-terminal domain LC20_05233 SM00421 helix_turn_helix, Lux Regulon LC20_05234 SM00421 helix_turn_helix, Lux Regulon LC20_05243 SM01230 LC20_05243 LC20_05244 SM00091 PAS domain LC20_05244 SM00387 Histidine kinase-like ATPases LC20_05244 SM00388 His Kinase A (phosphoacceptor) domain LC20_05245 SM00382 ATPases associated with a variety of cellular activities LC20_05245 SM00448 cheY-homologous receiver domain LC20_05246 SM00729 Elongator protein 3, MiaB family, Radical SAM LC20_05250 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs LC20_05250 SM00474 3'-5' exonuclease LC20_05250 SM00475 5'-3' exonuclease LC20_05250 SM00482 DNA polymerase A domain LC20_05256 SM00345 helix_turn_helix gluconate operon transcriptional repressor LC20_05256 SM00895 LC20_05256 LC20_05259 SM00354 helix_turn _helix lactose operon repressor LC20_05263 SM00382 ATPases associated with a variety of cellular activities LC20_05277 SM00344 helix_turn_helix ASNC type LC20_05279 SM01228 LC20_05279 LC20_05288 SM00382 ATPases associated with a variety of cellular activities LC20_05294 SM00347 helix_turn_helix multiple antibiotic resistance protein LC20_05302 SM00062 Bacterial periplasmic substrate-binding proteins LC20_05309 SM00421 helix_turn_helix, Lux Regulon LC20_05309 SM00448 cheY-homologous receiver domain LC20_05310 SM00387 Histidine kinase-like ATPases LC20_05310 SM00388 His Kinase A (phosphoacceptor) domain LC20_05312 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LC20_05312 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LC20_05314 SM00382 ATPases associated with a variety of cellular activities LC20_05314 SM00930 LC20_05314 LC20_05319 SM01234 LC20_05319 LC20_06014 SM00530 Helix-turn-helix XRE-family like proteins LC20_06037 SM00155 Phospholipase D. Active site motifs. LC20_06109 SM00470 ParB-like nuclease domain LC20_06111 SM00857 Resolvase, N terminal domain LC20_06202 SM00634 Bacterial Ig-like domain (group 1) LC20_06205 SM00966 SpoVT / AbrB like domain LC20_06212 SM00470 ParB-like nuclease domain LC20_06231 SM00857 Resolvase, N terminal domain LC20_06238 SM00857 Resolvase, N terminal domain LC20_06246 SM00421 helix_turn_helix, Lux Regulon LC20_06257 SM00421 helix_turn_helix, Lux Regulon LC20_06305 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor LC20_06355 SM00642 Alpha-amylase domain LC20_06395 SM01374 LC20_06395 LC20_06420 SM01022 LC20_06420 LC20_06525 SM00507 HNH nucleases LC20_06540 SM00052 Putative diguanylate phosphodiesterase LC20_06540 SM00267 diguanylate cyclase LC20_06630 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor LC20_06635 SM00634 Bacterial Ig-like domain (group 1) LC20_06900 SM00481 DNA polymerase alpha chain like domain LC20_06965 SM00710 Parallel beta-helix repeats LC20_06965 SM00912 haemagglutination activity domain LC20_07270 SM00530 Helix-turn-helix XRE-family like proteins LC20_07285 SM00857 Resolvase, N terminal domain LC20_07290 SM00857 Resolvase, N terminal domain LC20_07295 SM00507 HNH nucleases LC20_07335 SM00829 Enoylreductase LC20_07410 SM00357 Cold shock protein domain LC20_07415 SM00448 cheY-homologous receiver domain LC20_07715 SM00014 Acid phosphatase homologues LC20_07740 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family LC20_07785 SM00421 helix_turn_helix, Lux Regulon LC20_07790 SM00912 haemagglutination activity domain LC20_07815 SM00382 ATPases associated with a variety of cellular activities LC20_07815 SM00487 DEAD-like helicases superfamily LC20_07815 SM00490 helicase superfamily c-terminal domain LC20_07815 SM00847 Helicase associated domain (HA2) Add an annotation LC20_07820 SM00148 Phospholipase C, catalytic domain (part); domain X LC20_07875 SM00354 helix_turn _helix lactose operon repressor LC20_07915 SM00873 B3/4 domain LC20_07915 SM00874 tRNA synthetase B5 domain LC20_07915 SM00896 Ferredoxin-fold anticodon binding domain LC20_07945 SM00382 ATPases associated with a variety of cellular activities LC20_07950 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. LC20_07950 SM00245 tail specific protease LC20_08030 SM00357 Cold shock protein domain LC20_08105 SM00530 Helix-turn-helix XRE-family like proteins LC20_08385 SM00507 HNH nucleases LC20_08390 SM01252 LC20_08390 LC20_08430 SM00919 Malic enzyme, NAD binding domain LC20_08430 SM01274 LC20_08430 LC20_08450 SM00924 MgtE intracellular N domain LC20_08660 SM00486 DNA polymerase type-B family LC20_08775 SM00382 ATPases associated with a variety of cellular activities LC20_08995 SM00060 Fibronectin type 3 domain LC20_09020 SM00857 Resolvase, N terminal domain LC20_09195 SM00382 ATPases associated with a variety of cellular activities