locus-tag class description BB936_00005 PF08299 Bacterial dnaA protein helix-turn-helix BB936_00005 PF11638 DnaA N-terminal domain BB936_00005 PF00308 Bacterial dnaA protein BB936_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain BB936_00010 PF02767 DNA polymerase III beta subunit, central domain BB936_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain BB936_00015 PF02463 RecF/RecN/SMC N terminal domain BB936_00020 PF00204 DNA gyrase B BB936_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BB936_00020 PF01751 Toprim domain BB936_00020 PF00986 DNA gyrase B subunit, carboxyl terminus BB936_00020 PF18053 DNA gyrase B subunit insert domain BB936_00030 PF02423 Ornithine cyclodeaminase/mu-crystallin family BB936_00035 PF00291 Pyridoxal-phosphate dependent enzyme BB936_00040 PF07676 WD40-like Beta Propeller Repeat BB936_00040 PF12566 Protein of unknown function (DUF3748) BB936_00045 PF07119 Protein of unknown function (DUF1375) BB936_00050 PF00011 Hsp20/alpha crystallin family BB936_00055 PF00011 Hsp20/alpha crystallin family BB936_00065 PF06826 Predicted Permease Membrane Region BB936_00065 PF02080 TrkA-C domain BB936_00070 PF00155 Aminotransferase class I and II BB936_00075 PF00128 Alpha amylase, catalytic domain BB936_00080 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BB936_00080 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BB936_00085 PF07690 Major Facilitator Superfamily BB936_00110 PF00583 Acetyltransferase (GNAT) family BB936_00115 PF03352 Methyladenine glycosylase BB936_00120 PF02091 Glycyl-tRNA synthetase alpha subunit BB936_00125 PF05746 DALR anticodon binding domain BB936_00125 PF02092 Glycyl-tRNA synthetase beta subunit BB936_00130 PF11254 Protein of unknown function (DUF3053) BB936_00135 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BB936_00135 PF02378 Phosphotransferase system, EIIC BB936_00135 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BB936_00140 PF08125 Mannitol dehydrogenase C-terminal domain BB936_00140 PF01232 Mannitol dehydrogenase Rossmann domain BB936_00145 PF05068 Mannitol repressor BB936_00155 PF00155 Aminotransferase class I and II BB936_00155 PF00392 Bacterial regulatory proteins, gntR family BB936_00160 PF10928 Protein of unknown function (DUF2810) BB936_00165 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BB936_00170 PF01850 PIN domain BB936_00175 PF03475 3-alpha domain BB936_00175 PF03473 MOSC domain BB936_00180 PF02203 Tar ligand binding domain homologue BB936_00180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BB936_00180 PF00672 HAMP domain BB936_00185 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BB936_00185 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BB936_00190 PF02634 FdhD/NarQ family BB936_00195 PF01568 Molydopterin dinucleotide binding domain BB936_00195 PF00384 Molybdopterin oxidoreductase BB936_00195 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BB936_00200 PF01568 Molydopterin dinucleotide binding domain BB936_00200 PF00384 Molybdopterin oxidoreductase BB936_00200 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BB936_00205 PF13247 4Fe-4S dicluster domain BB936_00205 PF09163 Formate dehydrogenase N, transmembrane BB936_00210 PF01292 Prokaryotic cytochrome b561 BB936_00215 PF04216 Protein involved in formate dehydrogenase formation BB936_00220 PF12390 Selenocysteine synthase N terminal BB936_00220 PF03841 L-seryl-tRNA selenium transferase BB936_00225 PF09107 Elongation factor SelB, winged helix BB936_00225 PF09106 Elongation factor SelB, winged helix BB936_00225 PF00009 Elongation factor Tu GTP binding domain BB936_00225 PF03144 Elongation factor Tu domain 2 BB936_00230 PF07690 Major Facilitator Superfamily BB936_00235 PF01757 Acyltransferase family BB936_00250 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BB936_00250 PF02753 Pili assembly chaperone PapD, C-terminal domain BB936_00255 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BB936_00255 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BB936_00265 PF13407 Periplasmic binding protein domain BB936_00270 PF00005 ABC transporter BB936_00275 PF02653 Branched-chain amino acid transport system / permease component BB936_00280 PF12833 Helix-turn-helix domain BB936_00285 PF00589 Phage integrase family BB936_00285 PF14659 Phage integrase, N-terminal SAM-like domain BB936_00285 PF13356 Arm DNA-binding domain BB936_00320 PF13784 Fic/DOC family N-terminal BB936_00320 PF02661 Fic/DOC family BB936_00345 PF00221 Aromatic amino acid lyase BB936_00350 PF17391 Urocanase N-terminal domain BB936_00350 PF17392 Urocanase C-terminal domain BB936_00350 PF01175 Urocanase Rossmann-like domain BB936_00360 PF01548 Transposase BB936_00360 PF02371 Transposase IS116/IS110/IS902 family BB936_00370 PF01238 Phosphomannose isomerase type I BB936_00375 PF00232 Glycosyl hydrolase family 1 BB936_00385 PF02264 LamB porin BB936_00390 PF02378 Phosphotransferase system, EIIC BB936_00395 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BB936_00400 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BB936_00400 PF02378 Phosphotransferase system, EIIC BB936_00405 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BB936_00410 PF13358 DDE superfamily endonuclease BB936_00410 PF13592 Winged helix-turn helix BB936_00415 PF01773 Na+ dependent nucleoside transporter N-terminus BB936_00415 PF07662 Na+ dependent nucleoside transporter C-terminus BB936_00415 PF07670 Nucleoside recognition BB936_00420 PF00378 Enoyl-CoA hydratase/isomerase BB936_00425 PF13426 PAS domain BB936_00425 PF00990 Diguanylate cyclase, GGDEF domain BB936_00425 PF00563 EAL domain BB936_00505 PF08346 AntA/AntB antirepressor BB936_00505 PF10548 P22AR C-terminal domain BB936_00525 PF00589 Phage integrase family BB936_00525 PF13356 Arm DNA-binding domain BB936_00530 PF03755 YicC-like family, N-terminal region BB936_00530 PF08340 Domain of unknown function (DUF1732) BB936_00535 PF03725 3' exoribonuclease family, domain 2 BB936_00535 PF01138 3' exoribonuclease family, domain 1 BB936_00540 PF00156 Phosphoribosyl transferase domain BB936_00545 PF00440 Bacterial regulatory proteins, tetR family BB936_00550 PF00692 dUTPase BB936_00555 PF02441 Flavoprotein BB936_00555 PF04127 DNA / pantothenate metabolism flavoprotein BB936_00560 PF04002 RadC-like JAB domain BB936_00565 PF00830 Ribosomal L28 family BB936_00570 PF00471 Ribosomal protein L33 BB936_00575 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BB936_00575 PF06827 Zinc finger found in FPG and IleRS BB936_00575 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BB936_00580 PF01467 Cytidylyltransferase-like BB936_00585 PF00535 Glycosyl transferase family 2 BB936_00590 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) BB936_00595 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BB936_00600 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BB936_00605 PF01370 NAD dependent epimerase/dehydratase family BB936_00610 PF00155 Aminotransferase class I and II BB936_00615 PF00107 Zinc-binding dehydrogenase BB936_00615 PF08240 Alcohol dehydrogenase GroES-like domain BB936_00630 PF04748 Divergent polysaccharide deacetylase BB936_00635 PF01551 Peptidase family M23 BB936_00640 PF06415 BPG-independent PGAM N-terminus (iPGM_N) BB936_00640 PF01676 Metalloenzyme superfamily BB936_00645 PF00581 Rhodanese-like domain BB936_00650 PF00462 Glutaredoxin BB936_00655 PF02556 Preprotein translocase subunit SecB BB936_00660 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BB936_00660 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BB936_00665 PF00132 Bacterial transferase hexapeptide (six repeats) BB936_00665 PF06426 Serine acetyltransferase, N-terminal BB936_00670 PF00588 SpoU rRNA Methylase family BB936_00675 PF12833 Helix-turn-helix domain BB936_00675 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BB936_00675 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BB936_00675 PF02805 Metal binding domain of Ada BB936_00680 PF16527 Two-component sensor protein CpxA, periplasmic domain BB936_00680 PF00672 HAMP domain BB936_00680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BB936_00680 PF00512 His Kinase A (phospho-acceptor) domain BB936_00685 PF00072 Response regulator receiver domain BB936_00685 PF00486 Transcriptional regulatory protein, C terminal BB936_00690 PF07813 LTXXQ motif family protein BB936_00695 PF01545 Cation efflux family BB936_00695 PF16916 Dimerisation domain of Zinc Transporter BB936_00700 PF00365 Phosphofructokinase BB936_00715 PF00121 Triosephosphate isomerase BB936_00720 PF07305 Protein of unknown function (DUF1454) BB936_00725 PF05656 Protein of unknown function (DUF805) BB936_00730 PF00970 Oxidoreductase FAD-binding domain BB936_00730 PF00175 Oxidoreductase NAD-binding domain BB936_00745 PF07690 Major Facilitator Superfamily BB936_00755 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BB936_00755 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BB936_00760 PF00230 Major intrinsic protein BB936_00765 PF06005 Cell division protein ZapB BB936_00770 PF03737 Aldolase/RraA BB936_00775 PF01040 UbiA prenyltransferase family BB936_00780 PF07724 AAA domain (Cdc48 subfamily) BB936_00780 PF00004 ATPase family associated with various cellular activities (AAA) BB936_00780 PF10431 C-terminal, D2-small domain, of ClpB protein BB936_00785 PF00227 Proteasome subunit BB936_00790 PF05036 Sporulation related domain BB936_00795 PF00356 Bacterial regulatory proteins, lacI family BB936_00800 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BB936_00800 PF00270 DEAD/DEAH box helicase BB936_00800 PF00271 Helicase conserved C-terminal domain BB936_00800 PF17764 3′ DNA-binding domain (3′BD) BB936_00800 PF18074 Primosomal protein N C-terminal domain BB936_00805 PF01197 Ribosomal protein L31 BB936_00810 PF01340 Met Apo-repressor, MetJ BB936_00815 PF01053 Cys/Met metabolism PLP-dependent enzyme BB936_00820 PF00696 Amino acid kinase family BB936_00820 PF03447 Homoserine dehydrogenase, NAD binding domain BB936_00820 PF00742 Homoserine dehydrogenase BB936_00825 PF02219 Methylenetetrahydrofolate reductase BB936_00830 PF00311 Phosphoenolpyruvate carboxylase BB936_00835 PF07687 Peptidase dimerisation domain BB936_00835 PF01546 Peptidase family M20/M25/M40 BB936_00840 PF02774 Semialdehyde dehydrogenase, dimerisation domain BB936_00840 PF01118 Semialdehyde dehydrogenase, NAD binding domain BB936_00845 PF00696 Amino acid kinase family BB936_00850 PF14698 Argininosuccinate lyase C-terminal BB936_00850 PF00206 Lyase BB936_00855 PF07715 TonB-dependent Receptor Plug Domain BB936_00855 PF00593 TonB dependent receptor BB936_00875 PF00664 ABC transporter transmembrane region BB936_00875 PF00005 ABC transporter BB936_00880 PF00529 HlyD membrane-fusion protein of T1SS BB936_00895 PF07992 Pyridine nucleotide-disulphide oxidoreductase BB936_00895 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BB936_00900 PF00462 Glutaredoxin BB936_00900 PF08534 Redoxin BB936_00905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BB936_00905 PF03466 LysR substrate binding domain BB936_00910 PF07992 Pyridine nucleotide-disulphide oxidoreductase BB936_00910 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BB936_00915 PF00440 Bacterial regulatory proteins, tetR family BB936_00920 PF07226 Protein of unknown function (DUF1422) BB936_00925 PF05958 tRNA (Uracil-5-)-methyltransferase BB936_00930 PF00593 TonB dependent receptor BB936_00930 PF07715 TonB-dependent Receptor Plug Domain BB936_00935 PF01177 Asp/Glu/Hydantoin racemase BB936_00975 PF13407 Periplasmic binding protein domain BB936_00980 PF00005 ABC transporter BB936_00985 PF02653 Branched-chain amino acid transport system / permease component BB936_00990 PF02653 Branched-chain amino acid transport system / permease component BB936_00995 PF03466 LysR substrate binding domain BB936_00995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BB936_01000 PF04219 Protein of unknown function, DUF BB936_01005 PF13335 Magnesium chelatase, subunit ChlI C-terminal BB936_01005 PF01078 Magnesium chelatase, subunit ChlI BB936_01010 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BB936_01010 PF00205 Thiamine pyrophosphate enzyme, central domain BB936_01010 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BB936_01020 PF01063 Amino-transferase class IV BB936_01025 PF00920 Dehydratase family BB936_01030 PF00291 Pyridoxal-phosphate dependent enzyme BB936_01030 PF00585 C-terminal regulatory domain of Threonine dehydratase BB936_01045 PF03466 LysR substrate binding domain BB936_01045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BB936_01050 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BB936_01050 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BB936_01060 PF01320 Colicin immunity protein / pyocin immunity protein BB936_01065 PF01320 Colicin immunity protein / pyocin immunity protein BB936_01075 PF02753 Pili assembly chaperone PapD, C-terminal domain BB936_01075 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BB936_01095 PF02753 Pili assembly chaperone PapD, C-terminal domain BB936_01095 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BB936_01100 PF13592 Winged helix-turn helix BB936_01100 PF13358 DDE superfamily endonuclease BB936_01110 PF00356 Bacterial regulatory proteins, lacI family BB936_01125 PF06755 CbtA_toxin of type IV toxin-antitoxin system BB936_01135 PF00872 Transposase, Mutator family BB936_01140 PF12146 Serine aminopeptidase, S33 BB936_01145 PF13018 Extended Signal Peptide of Type V secretion system BB936_01145 PF13332 Hemagglutinin repeat BB936_01145 PF05860 haemagglutination activity domain BB936_01145 PF04829 Pre-toxin domain with VENN motif BB936_01150 PF08479 POTRA domain, ShlB-type BB936_01150 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB BB936_01150 PF17287 POTRA domain BB936_01175 PF07730 Histidine kinase BB936_01175 PF05231 MASE1 BB936_01175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BB936_01180 PF00072 Response regulator receiver domain BB936_01180 PF00196 Bacterial regulatory proteins, luxR family BB936_01185 PF08019 Phosphoethanolamine transferase EptA/EptB BB936_01185 PF00884 Sulfatase BB936_01190 PF02566 OsmC-like protein BB936_01195 PF02371 Transposase IS116/IS110/IS902 family BB936_01195 PF01548 Transposase BB936_01200 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BB936_01205 PF00528 Binding-protein-dependent transport system inner membrane component BB936_01210 PF12911 N-terminal TM domain of oligopeptide transport permease C BB936_01210 PF00528 Binding-protein-dependent transport system inner membrane component BB936_01215 PF00005 ABC transporter BB936_01215 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BB936_01220 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BB936_01220 PF00005 ABC transporter BB936_01225 PF11658 Cellulose biosynthesis protein BcsG BB936_01230 PF11120 Cellulose biosynthesis protein BcsF BB936_01235 PF10995 Cellulose biosynthesis GIL BB936_01245 PF06564 Cellulose biosynthesis protein BcsQ BB936_01250 PF00535 Glycosyl transferase family 2 BB936_01250 PF03552 Cellulose synthase BB936_01250 PF07238 PilZ domain BB936_01255 PF03170 Bacterial cellulose synthase subunit BB936_01260 PF01270 Glycosyl hydrolases family 8 BB936_01265 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) BB936_01275 PF00990 Diguanylate cyclase, GGDEF domain BB936_01275 PF00672 HAMP domain BB936_01275 PF00563 EAL domain BB936_01275 PF17154 Gammaproteobacterial periplasmic sensor domain BB936_01280 PF06178 Oligogalacturonate-specific porin protein (KdgM) BB936_01285 PF06917 Periplasmic pectate lyase BB936_01295 PF00375 Sodium:dicarboxylate symporter family BB936_01300 PF00675 Insulinase (Peptidase family M16) BB936_01300 PF05193 Peptidase M16 inactive domain BB936_01305 PF00294 pfkB family carbohydrate kinase BB936_01310 PF01361 Tautomerase enzyme BB936_01315 PF00563 EAL domain BB936_01325 PF02611 CDP-diacylglycerol pyrophosphatase BB936_01330 PF03631 Virulence factor BrkB BB936_01335 PF03797 Autotransporter beta-domain BB936_01340 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BB936_01340 PF07992 Pyridine nucleotide-disulphide oxidoreductase BB936_01345 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ BB936_01350 PF01432 Peptidase family M3 BB936_01355 PF04445 Putative SAM-dependent methyltransferase BB936_01360 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) BB936_01360 PF08548 Peptidase M10 serralysin C terminal BB936_01360 PF00413 Matrixin BB936_01365 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BB936_01365 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BB936_01370 PF00582 Universal stress protein family BB936_01375 PF02371 Transposase IS116/IS110/IS902 family BB936_01375 PF01548 Transposase BB936_01380 PF10625 Universal stress protein B (UspB) BB936_01385 PF01384 Phosphate transporter family BB936_01395 PF08721 TnsA endonuclease C terminal BB936_01395 PF08722 TnsA endonuclease N terminal BB936_01400 PF00665 Integrase core domain BB936_01405 PF13401 AAA domain BB936_01405 PF11426 Tn7 transposition regulator TnsC BB936_01430 PF13610 DDE domain BB936_01440 PF13358 DDE superfamily endonuclease BB936_01440 PF13592 Winged helix-turn helix BB936_01465 PF00375 Sodium:dicarboxylate symporter family BB936_01480 PF07476 Methylaspartate ammonia-lyase C-terminus BB936_01480 PF05034 Methylaspartate ammonia-lyase N-terminus BB936_01485 PF06368 Methylaspartate mutase E chain (MutE) BB936_01490 PF13941 MutL protein BB936_01500 PF00288 GHMP kinases N terminal domain BB936_01505 PF10414 Sirohaem synthase dimerisation region BB936_01505 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BB936_01505 PF14824 Sirohaem biosynthesis protein central BB936_01510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BB936_01510 PF03466 LysR substrate binding domain BB936_01515 PF05681 Fumarate hydratase (Fumerase) BB936_01515 PF05683 Fumarase C-terminus BB936_01535 PF03466 LysR substrate binding domain BB936_01535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BB936_01540 PF07690 Major Facilitator Superfamily BB936_01545 PF00171 Aldehyde dehydrogenase family BB936_01550 PF04962 KduI/IolB family BB936_01560 PF00294 pfkB family carbohydrate kinase BB936_01565 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BB936_01565 PF00205 Thiamine pyrophosphate enzyme, central domain BB936_01565 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BB936_01570 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BB936_01570 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BB936_01575 PF01261 Xylose isomerase-like TIM barrel BB936_01580 PF00583 Acetyltransferase (GNAT) family BB936_01585 PF17954 Quercetinase C-terminal cupin domain BB936_01585 PF02678 Pirin BB936_01590 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BB936_01590 PF00356 Bacterial regulatory proteins, lacI family BB936_01595 PF02447 GntP family permease BB936_01600 PF01202 Shikimate kinase BB936_01605 PF01914 MarC family integral membrane protein BB936_01610 PF02774 Semialdehyde dehydrogenase, dimerisation domain BB936_01610 PF01118 Semialdehyde dehydrogenase, NAD binding domain BB936_01615 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BB936_01615 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BB936_01615 PF00205 Thiamine pyrophosphate enzyme, central domain BB936_01620 PF03306 Alpha-acetolactate decarboxylase BB936_01625 PF03466 LysR substrate binding domain BB936_01625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BB936_01630 PF06580 Histidine kinase BB936_01630 PF07694 5TMR of 5TMR-LYT BB936_01635 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BB936_01635 PF00128 Alpha amylase, catalytic domain BB936_01635 PF02806 Alpha amylase, C-terminal all-beta domain BB936_01640 PF18390 Glycogen debranching enzyme C-terminal domain BB936_01640 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BB936_01640 PF00128 Alpha amylase, catalytic domain BB936_01645 PF00483 Nucleotidyl transferase BB936_01650 PF00534 Glycosyl transferases group 1 BB936_01650 PF08323 Starch synthase catalytic domain BB936_01655 PF00343 Carbohydrate phosphorylase BB936_01660 PF01266 FAD dependent oxidoreductase BB936_01660 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BB936_01670 PF02371 Transposase IS116/IS110/IS902 family BB936_01670 PF01548 Transposase BB936_01675 PF08220 DeoR-like helix-turn-helix domain BB936_01675 PF00455 DeoR C terminal sensor domain BB936_01680 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease BB936_01680 PF01694 Rhomboid family BB936_01685 PF00581 Rhodanese-like domain BB936_01695 PF00196 Bacterial regulatory proteins, luxR family BB936_01695 PF17874 MalT-like TPR region BB936_01700 PF00343 Carbohydrate phosphorylase BB936_01705 PF02446 4-alpha-glucanotransferase BB936_01710 PF02371 Transposase IS116/IS110/IS902 family BB936_01710 PF01548 Transposase BB936_01715 PF01106 NifU-like domain BB936_01715 PF01521 Iron-sulphur cluster biosynthesis BB936_01720 PF00156 Phosphoribosyl transferase domain BB936_01725 PF00561 alpha/beta hydrolase fold BB936_01730 PF07338 Protein of unknown function (DUF1471) BB936_01740 PF09012 FeoC like transcriptional regulator BB936_01745 PF07664 Ferrous iron transport protein B C terminus BB936_01745 PF17910 FeoB cytosolic helical domain BB936_01745 PF07670 Nucleoside recognition BB936_01745 PF02421 Ferrous iron transport protein B BB936_01750 PF04023 FeoA domain BB936_01755 PF00575 S1 RNA binding domain BB936_01755 PF17674 HHH domain BB936_01755 PF09371 Tex-like protein N-terminal domain BB936_01755 PF16921 Tex protein YqgF-like domain BB936_01780 PF03449 Transcription elongation factor, N-terminal BB936_01780 PF01272 Transcription elongation factor, GreA/GreB, C-term BB936_01785 PF00486 Transcriptional regulatory protein, C terminal BB936_01785 PF00072 Response regulator receiver domain BB936_01790 PF00512 His Kinase A (phospho-acceptor) domain BB936_01790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BB936_01790 PF00672 HAMP domain BB936_01795 PF01293 Phosphoenolpyruvate carboxykinase BB936_01800 PF01430 Hsp33 protein BB936_01805 PF01479 S4 domain BB936_01810 PF13419 Haloacid dehalogenase-like hydrolase BB936_01815 PF07095 Intracellular growth attenuator protein IgaA BB936_01820 PF00293 NUDIX domain BB936_01825 PF00905 Penicillin binding protein transpeptidase domain BB936_01825 PF00912 Transglycosylase BB936_01825 PF17092 Penicillin-binding protein OB-like domain BB936_01850 PF00263 Bacterial type II and III secretion system protein BB936_01850 PF03958 Bacterial type II/III secretion system short domain BB936_01855 PF01202 Shikimate kinase BB936_01860 PF01761 3-dehydroquinate synthase BB936_01865 PF05036 Sporulation related domain BB936_01870 PF02086 D12 class N6 adenine-specific DNA methyltransferase BB936_01875 PF00834 Ribulose-phosphate 3 epimerase family BB936_01885 PF00579 tRNA synthetases class I (W and Y) BB936_01890 PF10414 Sirohaem synthase dimerisation region BB936_01890 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BB936_01890 PF14824 Sirohaem biosynthesis protein central BB936_01900 PF13806 Rieske-like [2Fe-2S] domain BB936_01905 PF04324 BFD-like [2Fe-2S] binding domain BB936_01905 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BB936_01905 PF07992 Pyridine nucleotide-disulphide oxidoreductase BB936_01905 PF18267 Rubredoxin NAD+ reductase C-terminal domain BB936_01905 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BB936_01910 PF07969 Amidohydrolase family BB936_01915 PF07690 Major Facilitator Superfamily BB936_01920 PF00356 Bacterial regulatory proteins, lacI family BB936_01925 PF02056 Family 4 glycosyl hydrolase BB936_01925 PF11975 Family 4 glycosyl hydrolase C-terminal domain BB936_01930 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BB936_01935 PF05872 Bacterial protein of unknown function (DUF853) BB936_01940 PF00117 Glutamine amidotransferase class-I BB936_01945 PF00202 Aminotransferase class-III BB936_01955 PF13545 Crp-like helix-turn-helix domain BB936_01955 PF00027 Cyclic nucleotide-binding domain BB936_01960 PF02566 OsmC-like protein BB936_01965 PF00485 Phosphoribulokinase / Uridine kinase family BB936_01970 PF06794 Uncharacterised protein family (UPF0270) BB936_01975 PF00561 alpha/beta hydrolase fold BB936_01980 PF01810 LysE type translocator BB936_01985 PF02567 Phenazine biosynthesis-like protein BB936_01990 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BB936_01995 PF00005 ABC transporter BB936_02000 PF00528 Binding-protein-dependent transport system inner membrane component BB936_02005 PF02668 Taurine catabolism dioxygenase TauD, TfdA family BB936_02020 PF12848 ABC transporter BB936_02020 PF00005 ABC transporter BB936_02025 PF02525 Flavodoxin-like fold BB936_02030 PF00999 Sodium/hydrogen exchanger family BB936_02030 PF02254 TrkA-N domain BB936_02035 PF09526 Probable metal-binding protein (DUF2387) BB936_02040 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BB936_02045 PF04102 SlyX BB936_02050 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BB936_02050 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BB936_02055 PF08348 YheO-like PAS domain BB936_02055 PF13309 HTH domain BB936_02060 PF02635 DsrE/DsrF-like family BB936_02065 PF02635 DsrE/DsrF-like family BB936_02070 PF04077 DsrH like protein BB936_02075 PF00164 Ribosomal protein S12/S23 BB936_02080 PF00177 Ribosomal protein S7p/S5e BB936_02085 PF03144 Elongation factor Tu domain 2 BB936_02085 PF00009 Elongation factor Tu GTP binding domain BB936_02085 PF14492 Elongation Factor G, domain II BB936_02085 PF00679 Elongation factor G C-terminus BB936_02085 PF03764 Elongation factor G, domain IV BB936_02095 PF04324 BFD-like [2Fe-2S] binding domain BB936_02100 PF00210 Ferritin-like domain BB936_02105 PF00338 Ribosomal protein S10p/S20e BB936_02110 PF00297 Ribosomal protein L3 BB936_02115 PF00573 Ribosomal protein L4/L1 family BB936_02120 PF00276 Ribosomal protein L23 BB936_02125 PF03947 Ribosomal Proteins L2, C-terminal domain BB936_02125 PF00181 Ribosomal Proteins L2, RNA binding domain BB936_02130 PF00203 Ribosomal protein S19 BB936_02135 PF00237 Ribosomal protein L22p/L17e BB936_02140 PF00189 Ribosomal protein S3, C-terminal domain BB936_02140 PF07650 KH domain BB936_02145 PF00252 Ribosomal protein L16p/L10e BB936_02150 PF00831 Ribosomal L29 protein BB936_02155 PF00366 Ribosomal protein S17 BB936_02160 PF00238 Ribosomal protein L14p/L23e BB936_02165 PF00467 KOW motif BB936_02165 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BB936_02170 PF00281 Ribosomal protein L5 BB936_02170 PF00673 ribosomal L5P family C-terminus BB936_02175 PF00253 Ribosomal protein S14p/S29e BB936_02180 PF00410 Ribosomal protein S8 BB936_02185 PF00347 Ribosomal protein L6 BB936_02190 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BB936_02195 PF03719 Ribosomal protein S5, C-terminal domain BB936_02195 PF00333 Ribosomal protein S5, N-terminal domain BB936_02200 PF00327 Ribosomal protein L30p/L7e BB936_02205 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BB936_02210 PF00344 SecY translocase BB936_02215 PF00444 Ribosomal protein L36 BB936_02225 PF00411 Ribosomal protein S11 BB936_02230 PF00163 Ribosomal protein S4/S9 N-terminal domain BB936_02230 PF01479 S4 domain BB936_02235 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BB936_02235 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BB936_02235 PF01000 RNA polymerase Rpb3/RpoA insert domain BB936_02240 PF01196 Ribosomal protein L17 BB936_02245 PF09350 Domain of unknown function (DUF1992) BB936_02250 PF13411 MerR HTH family regulatory protein BB936_02255 PF03889 Alternative ribosome-rescue factor A BB936_02265 PF01741 Large-conductance mechanosensitive channel, MscL BB936_02270 PF02254 TrkA-N domain BB936_02270 PF02080 TrkA-C domain BB936_02275 PF01029 NusB family BB936_02275 PF01189 16S rRNA methyltransferase RsmB/F BB936_02280 PF02911 Formyl transferase, C-terminal domain BB936_02280 PF00551 Formyl transferase BB936_02285 PF01327 Polypeptide deformylase BB936_02290 PF02481 DNA recombination-mediator protein A BB936_02290 PF17782 DprA winged helix domain BB936_02295 PF04361 Protein of unknown function (DUF494) BB936_02300 PF01396 Topoisomerase DNA binding C4 zinc finger BB936_02305 PF01300 Telomere recombination BB936_02310 PF08501 Shikimate dehydrogenase substrate binding domain BB936_02310 PF01488 Shikimate / quinate 5-dehydrogenase BB936_02310 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BB936_02315 PF00132 Bacterial transferase hexapeptide (six repeats) BB936_02345 PF02371 Transposase IS116/IS110/IS902 family BB936_02345 PF01548 Transposase BB936_02350 PF04204 Homoserine O-succinyltransferase BB936_02355 PF01274 Malate synthase BB936_02360 PF00463 Isocitrate lyase family BB936_02365 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) BB936_02370 PF01614 Bacterial transcriptional regulator BB936_02370 PF09339 IclR helix-turn-helix domain BB936_02375 PF00809 Pterin binding enzyme BB936_02375 PF02607 B12 binding domain BB936_02375 PF02574 Homocysteine S-methyltransferase BB936_02375 PF02310 B12 binding domain BB936_02375 PF02965 Vitamin B12 dependent methionine synthase, activation domain BB936_02380 PF05860 haemagglutination activity domain BB936_02380 PF13332 Hemagglutinin repeat BB936_02385 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB BB936_02385 PF17287 POTRA domain BB936_02385 PF08479 POTRA domain, ShlB-type BB936_02390 PF01758 Sodium Bile acid symporter family BB936_02395 PF01842 ACT domain BB936_02395 PF00696 Amino acid kinase family BB936_02400 PF00342 Phosphoglucose isomerase BB936_02405 PF06146 Phosphate-starvation-inducible E BB936_02410 PF02371 Transposase IS116/IS110/IS902 family BB936_02410 PF01548 Transposase BB936_02415 PF00528 Binding-protein-dependent transport system inner membrane component BB936_02420 PF00528 Binding-protein-dependent transport system inner membrane component BB936_02420 PF14785 Maltose transport system permease protein MalF P2 domain BB936_02425 PF01547 Bacterial extracellular solute-binding protein BB936_02430 PF00005 ABC transporter BB936_02430 PF17912 MalK OB fold domain BB936_02435 PF02264 LamB porin BB936_02440 PF07148 Maltose operon periplasmic protein precursor (MalM) BB936_02450 PF04345 Chorismate lyase BB936_02455 PF01040 UbiA prenyltransferase family BB936_02460 PF01553 Acyltransferase BB936_02465 PF01219 Prokaryotic diacylglycerol kinase BB936_02470 PF01726 LexA DNA binding domain BB936_02470 PF00717 Peptidase S24-like BB936_02475 PF05532 CsbD-like BB936_02480 PF01475 Ferric uptake regulator family BB936_02485 PF01757 Acyltransferase family BB936_02490 PF01207 Dihydrouridine synthase (Dus) BB936_02495 PF09583 Phage shock protein G (Phageshock_PspG) BB936_02505 PF00107 Zinc-binding dehydrogenase BB936_02505 PF08240 Alcohol dehydrogenase GroES-like domain BB936_02510 PF03796 DnaB-like helicase C terminal domain BB936_02510 PF00772 DnaB-like helicase N terminal domain BB936_02515 PF01168 Alanine racemase, N-terminal domain BB936_02515 PF00842 Alanine racemase, C-terminal domain BB936_02520 PF00155 Aminotransferase class I and II BB936_02525 PF04237 YjbR BB936_02530 PF17760 UvrA interaction domain BB936_02530 PF17755 UvrA DNA-binding domain BB936_02530 PF00005 ABC transporter BB936_02535 PF00436 Single-strand binding protein family BB936_02540 PF07804 HipA-like C-terminal domain BB936_02540 PF13657 HipA N-terminal domain BB936_02555 PF00860 Permease family BB936_02560 PF00999 Sodium/hydrogen exchanger family BB936_02565 PF03466 LysR substrate binding domain BB936_02565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BB936_02570 PF03788 LrgA family BB936_02580 PF00005 ABC transporter BB936_02585 PF00528 Binding-protein-dependent transport system inner membrane component BB936_02590 PF00528 Binding-protein-dependent transport system inner membrane component BB936_02595 PF00497 Bacterial extracellular solute-binding proteins, family 3 BB936_02605 PF01548 Transposase BB936_02605 PF02371 Transposase IS116/IS110/IS902 family BB936_02610 PF03279 Bacterial lipid A biosynthesis acyltransferase BB936_02615 PF00939 Sodium:sulfate symporter transmembrane region BB936_02620 PF00313 'Cold-shock' DNA-binding domain BB936_02625 PF00313 'Cold-shock' DNA-binding domain BB936_02630 PF05433 Glycine zipper 2TM domain BB936_02640 PF02954 Bacterial regulatory protein, Fis family BB936_02645 PF01207 Dihydrouridine synthase (Dus) BB936_02655 PF00474 Sodium:solute symporter family BB936_02660 PF06196 Protein of unknown function (DUF997) BB936_02665 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BB936_02665 PF00289 Biotin carboxylase, N-terminal domain BB936_02665 PF02785 Biotin carboxylase C-terminal domain BB936_02670 PF00364 Biotin-requiring enzyme BB936_02675 PF01220 Dehydroquinase class II BB936_02680 PF01794 Ferric reductase like transmembrane component BB936_02685 PF00174 Oxidoreductase molybdopterin binding domain BB936_02690 PF08240 Alcohol dehydrogenase GroES-like domain BB936_02690 PF00107 Zinc-binding dehydrogenase BB936_02695 PF17157 Gammaproteobacterial periplasmic sensor domain BB936_02695 PF00990 Diguanylate cyclase, GGDEF domain BB936_02695 PF00563 EAL domain BB936_02705 PF04085 rod shape-determining protein MreC BB936_02710 PF04093 rod shape-determining protein MreD BB936_02715 PF02545 Maf-like protein BB936_02720 PF00575 S1 RNA binding domain BB936_02720 PF10150 Ribonuclease E/G family BB936_02725 PF13116 Protein of unknown function BB936_02725 PF13502 AsmA-like C-terminal region BB936_02730 PF00795 Carbon-nitrogen hydrolase BB936_02735 PF01523 Putative modulator of DNA gyrase BB936_02775 PF02371 Transposase IS116/IS110/IS902 family BB936_02775 PF01548 Transposase BB936_02785 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain BB936_02785 PF18413 Neuraminidase-like domain BB936_02805 PF03466 LysR substrate binding domain BB936_02805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BB936_02810 PF07869 Protein of unknown function (DUF1656) BB936_02815 PF13533 Biotin-lipoyl like BB936_02820 PF04632 Fusaric acid resistance protein family BB936_02825 PF00171 Aldehyde dehydrogenase family BB936_02835 PF01337 Barstar (barnase inhibitor) BB936_02840 PF04751 Protein of unknown function (DUF615) BB936_02845 PF00589 Phage integrase family BB936_02845 PF02899 Phage integrase, N-terminal SAM-like domain BB936_02875 PF02086 D12 class N6 adenine-specific DNA methyltransferase BB936_02885 PF05840 Bacteriophage replication gene A protein (GPA) BB936_03020 PF01523 Putative modulator of DNA gyrase BB936_03025 PF02371 Transposase IS116/IS110/IS902 family BB936_03025 PF01548 Transposase BB936_03030 PF07361 Cytochrome b562 BB936_03035 PF14760 Rnk N-terminus BB936_03035 PF01272 Transcription elongation factor, GreA/GreB, C-term BB936_03065 PF01979 Amidohydrolase family BB936_03070 PF03841 L-seryl-tRNA selenium transferase BB936_03075 PF07071 KDGP aldolase BB936_03085 PF08279 HTH domain BB936_03085 PF00874 PRD domain BB936_03085 PF05043 Mga helix-turn-helix domain BB936_03085 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BB936_03090 PF01381 Helix-turn-helix BB936_03095 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB BB936_03105 PF00356 Bacterial regulatory proteins, lacI family BB936_03115 PF11941 Domain of unknown function (DUF3459) BB936_03115 PF00128 Alpha amylase, catalytic domain BB936_03130 PF14403 Circularly permuted ATP-grasp type 2 BB936_03130 PF04168 A predicted alpha-helical domain with a conserved ER motif. BB936_03135 PF14403 Circularly permuted ATP-grasp type 2 BB936_03140 PF01042 Endoribonuclease L-PSP BB936_03145 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain BB936_03145 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain BB936_03150 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BB936_03150 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BB936_03155 PF00381 PTS HPr component phosphorylation site BB936_03160 PF03668 P-loop ATPase protein family BB936_03165 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BB936_03170 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BB936_03175 PF00309 Sigma-54 factor, Activator interacting domain (AID) BB936_03175 PF04963 Sigma-54 factor, core binding domain BB936_03175 PF04552 Sigma-54, DNA binding domain BB936_03180 PF00005 ABC transporter BB936_03180 PF12399 Branched-chain amino acid ATP-binding cassette transporter BB936_03185 PF03968 OstA-like protein BB936_03190 PF06835 Lipopolysaccharide-assembly, LptC-related BB936_03200 PF00571 CBS domain BB936_03200 PF01380 SIS domain BB936_03210 PF00005 ABC transporter BB936_03215 PF02405 Permease MlaE BB936_03220 PF02470 MlaD protein BB936_03225 PF05494 MlaC protein BB936_03230 PF13466 STAS domain BB936_03235 PF01722 BolA-like protein BB936_03240 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BB936_03245 PF13180 PDZ domain BB936_03250 PF00595 PDZ domain BB936_03250 PF13180 PDZ domain BB936_03255 PF06295 Protein of unknown function (DUF1043) BB936_03260 PF03969 AFG1-like ATPase BB936_03265 PF00572 Ribosomal protein L13 BB936_03270 PF00380 Ribosomal protein S9/S16 BB936_03275 PF00043 Glutathione S-transferase, C-terminal domain BB936_03275 PF02798 Glutathione S-transferase, N-terminal domain BB936_03280 PF04386 Stringent starvation protein B BB936_03295 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BB936_03295 PF07992 Pyridine nucleotide-disulphide oxidoreductase BB936_03300 PF00310 Glutamine amidotransferases class-II BB936_03300 PF01645 Conserved region in glutamate synthase BB936_03300 PF04898 Glutamate synthase central domain BB936_03300 PF01493 GXGXG motif BB936_03310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BB936_03310 PF00072 Response regulator receiver domain BB936_03310 PF00512 His Kinase A (phospho-acceptor) domain BB936_03310 PF00989 PAS fold BB936_03310 PF01627 Hpt domain BB936_03310 PF18415 Histidine kinase receptor ArcB trans-membrane domain BB936_03320 PF00912 Transglycosylase BB936_03325 PF04972 BON domain BB936_03330 PF13580 SIS domain BB936_03335 PF02021 Uncharacterised protein family UPF0102 BB936_03340 PF04348 LppC putative lipoprotein BB936_03345 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BB936_03365 PF00239 Resolvase, N terminal domain BB936_03365 PF02796 Helix-turn-helix domain of resolvase BB936_03375 PF00145 C-5 cytosine-specific DNA methylase BB936_03385 PF01381 Helix-turn-helix BB936_03400 PF02753 Pili assembly chaperone PapD, C-terminal domain BB936_03400 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BB936_03405 PF00577 Outer membrane usher protein BB936_03405 PF13954 PapC N-terminal domain BB936_03405 PF13953 PapC C-terminal domain BB936_03415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BB936_03415 PF03466 LysR substrate binding domain BB936_03420 PF00248 Aldo/keto reductase family BB936_03425 PF08240 Alcohol dehydrogenase GroES-like domain BB936_03425 PF00107 Zinc-binding dehydrogenase BB936_03430 PF17954 Quercetinase C-terminal cupin domain BB936_03430 PF02678 Pirin BB936_03435 PF03466 LysR substrate binding domain BB936_03435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BB936_03440 PF13409 Glutathione S-transferase, N-terminal domain BB936_03445 PF07681 DoxX BB936_03450 PF13997 YqjK-like protein BB936_03455 PF07332 Putative Actinobacterial Holin-X, holin superfamily III BB936_03460 PF05957 Bacterial protein of unknown function (DUF883) BB936_03470 PF13721 SecD export protein N-terminal TM region BB936_03475 PF09335 SNARE associated Golgi protein BB936_03485 PF07729 FCD domain BB936_03485 PF00392 Bacterial regulatory proteins, gntR family BB936_03490 PF07690 Major Facilitator Superfamily BB936_03495 PF02614 Glucuronate isomerase BB936_03500 PF01232 Mannitol dehydrogenase Rossmann domain BB936_03500 PF08125 Mannitol dehydrogenase C-terminal domain BB936_03505 PF08666 SAF domain BB936_03505 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus BB936_03510 PF10688 Bacterial inner membrane protein BB936_03515 PF00375 Sodium:dicarboxylate symporter family BB936_03520 PF03741 Integral membrane protein TerC family BB936_03530 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BB936_03535 PF01863 Protein of unknown function DUF45 BB936_03555 PF03797 Autotransporter beta-domain BB936_03560 PF05175 Methyltransferase small domain BB936_03565 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BB936_03565 PF07992 Pyridine nucleotide-disulphide oxidoreductase BB936_03570 PF00892 EamA-like transporter family BB936_03575 PF03729 Short repeat of unknown function (DUF308) BB936_03585 PF00282 Pyridoxal-dependent decarboxylase conserved domain BB936_03595 PF04960 Glutaminase BB936_03605 PF00872 Transposase, Mutator family BB936_03610 PF02378 Phosphotransferase system, EIIC BB936_03610 PF00367 phosphotransferase system, EIIB BB936_03615 PF13580 SIS domain BB936_03620 PF01380 SIS domain BB936_03620 PF01418 Helix-turn-helix domain, rpiR family BB936_03625 PF00933 Glycosyl hydrolase family 3 N terminal domain BB936_03625 PF01915 Glycosyl hydrolase family 3 C-terminal domain BB936_03635 PF07075 Protein of unknown function (DUF1343) BB936_03645 PF02371 Transposase IS116/IS110/IS902 family BB936_03645 PF01548 Transposase BB936_03650 PF03979 Sigma-70 factor, region 1.1 BB936_03650 PF04539 Sigma-70 region 3 BB936_03650 PF00140 Sigma-70 factor, region 1.2 BB936_03650 PF04545 Sigma-70, region 4 BB936_03650 PF04542 Sigma-70 region 2 BB936_03650 PF04546 Sigma-70, non-essential region BB936_03655 PF08278 DNA primase DnaG DnaB-binding BB936_03655 PF08275 DNA primase catalytic core, N-terminal domain BB936_03655 PF10410 DnaB-helicase binding domain of primase BB936_03655 PF01807 CHC2 zinc finger BB936_03660 PF01165 Ribosomal protein S21 BB936_03665 PF00814 Glycoprotease family BB936_03670 PF02660 Glycerol-3-phosphate acyltransferase BB936_03675 PF02152 Dihydroneopterin aldolase BB936_03680 PF02673 Bacitracin resistance protein BacA BB936_03685 PF01966 HD domain BB936_03685 PF01743 Poly A polymerase head domain BB936_03685 PF12627 Probable RNA and SrmB- binding site of polymerase A BB936_03690 PF08239 Bacterial SH3 domain BB936_03695 PF01928 CYTH domain BB936_03700 PF08335 GlnD PII-uridylyltransferase BB936_03700 PF03710 Glutamate-ammonia ligase adenylyltransferase BB936_03705 PF01467 Cytidylyltransferase-like BB936_03705 PF00294 pfkB family carbohydrate kinase BB936_03710 PF13520 Amino acid permease BB936_03715 PF04380 Membrane fusogenic activity BB936_03720 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BB936_03725 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BB936_03730 PF03738 Glutathionylspermidine synthase preATP-grasp BB936_03735 PF06693 Protein of unknown function (DUF1190) BB936_03745 PF02321 Outer membrane efflux protein BB936_03750 PF00293 NUDIX domain BB936_03755 PF06853 Protein of unknown function (DUF1249) BB936_03760 PF00149 Calcineurin-like phosphoesterase BB936_03765 PF05728 Uncharacterised protein family (UPF0227) BB936_03770 PF00986 DNA gyrase B subunit, carboxyl terminus BB936_03770 PF00204 DNA gyrase B BB936_03770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BB936_03770 PF01751 Toprim domain BB936_03775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BB936_03775 PF03466 LysR substrate binding domain BB936_03780 PF03992 Antibiotic biosynthesis monooxygenase BB936_03785 PF02525 Flavodoxin-like fold BB936_03790 PF03989 DNA gyrase C-terminal domain, beta-propeller BB936_03790 PF00521 DNA gyrase/topoisomerase IV, subunit A BB936_03795 PF01553 Acyltransferase BB936_03800 PF07731 Multicopper oxidase BB936_03800 PF07732 Multicopper oxidase BB936_03805 PF11842 Domain of unknown function (DUF3362) BB936_03805 PF08497 Radical SAM N-terminal BB936_03805 PF04055 Radical SAM superfamily BB936_03810 PF00248 Aldo/keto reductase family BB936_03815 PF00465 Iron-containing alcohol dehydrogenase BB936_03820 PF06719 AraC-type transcriptional regulator N-terminus BB936_03820 PF12833 Helix-turn-helix domain BB936_03825 PF09335 SNARE associated Golgi protein BB936_03830 PF01053 Cys/Met metabolism PLP-dependent enzyme BB936_03835 PF01618 MotA/TolQ/ExbB proton channel family BB936_03840 PF02472 Biopolymer transport protein ExbD/TolR BB936_03875 PF00437 Type II/IV secretion system protein BB936_03890 PF13629 Pilus formation protein N terminal region BB936_03890 PF00263 Bacterial type II and III secretion system protein BB936_03890 PF04972 BON domain BB936_03915 PF13532 2OG-Fe(II) oxygenase superfamily BB936_03920 PF00873 AcrB/AcrD/AcrF family BB936_03930 PF02586 SOS response associated peptidase (SRAP) BB936_03945 PF12833 Helix-turn-helix domain BB936_03950 PF01527 Transposase BB936_03970 PF12704 MacB-like periplasmic core domain BB936_03970 PF00005 ABC transporter BB936_03970 PF02687 FtsX-like permease family BB936_03975 PF12833 Helix-turn-helix domain BB936_03985 PF13333 Integrase core domain BB936_03985 PF13276 HTH-like domain BB936_03985 PF00665 Integrase core domain BB936_03995 PF02371 Transposase IS116/IS110/IS902 family BB936_03995 PF01548 Transposase BB936_04015 PF00460 Flagella basal body rod protein BB936_04020 PF00460 Flagella basal body rod protein BB936_04020 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BB936_04025 PF03963 Flagellar hook capping protein - N-terminal region BB936_04025 PF13860 FlgD Ig-like domain BB936_04025 PF13861 FlgD Tudor-like domain BB936_04030 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BB936_04030 PF07559 Flagellar basal body protein FlaE BB936_04030 PF00460 Flagella basal body rod protein BB936_04035 PF00460 Flagella basal body rod protein BB936_04035 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BB936_04040 PF00460 Flagella basal body rod protein BB936_04040 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BB936_04045 PF02107 Flagellar L-ring protein BB936_04050 PF02119 Flagellar P-ring protein BB936_04085 PF00700 Bacterial flagellin C-terminal helical region BB936_04085 PF00669 Bacterial flagellin N-terminal helical region BB936_04090 PF02465 Flagellar hook-associated protein 2 N-terminus BB936_04090 PF07196 Flagellin hook IN motif BB936_04090 PF07195 Flagellar hook-associated protein 2 C-terminus BB936_04095 PF02561 Flagellar protein FliS BB936_04115 PF04545 Sigma-70, region 4 BB936_04115 PF04542 Sigma-70 region 2 BB936_04120 PF01618 MotA/TolQ/ExbB proton channel family BB936_04125 PF13677 Membrane MotB of proton-channel complex MotA/MotB BB936_04125 PF00691 OmpA family BB936_04130 PF05433 Glycine zipper 2TM domain BB936_04135 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal BB936_04135 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BB936_04140 PF13247 4Fe-4S dicluster domain BB936_04145 PF03916 Polysulphide reductase, NrfD BB936_04150 PF00374 Nickel-dependent hydrogenase BB936_04155 PF01750 Hydrogenase maturation protease BB936_04160 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE BB936_04165 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA BB936_04170 PF02492 CobW/HypB/UreG, nucleotide-binding domain BB936_04175 PF01455 HupF/HypC family BB936_04180 PF01924 Hydrogenase formation hypA family BB936_04185 PF02769 AIR synthase related protein, C-terminal domain BB936_04185 PF00586 AIR synthase related protein, N-terminal domain BB936_04190 PF07503 HypF finger BB936_04190 PF00708 Acylphosphatase BB936_04190 PF17788 HypF Kae1-like domain BB936_04190 PF01300 Telomere recombination BB936_04195 PF13784 Fic/DOC family N-terminal BB936_04195 PF02661 Fic/DOC family BB936_04200 PF02110 Hydroxyethylthiazole kinase family BB936_04215 PF08448 PAS fold BB936_04215 PF00990 Diguanylate cyclase, GGDEF domain BB936_04215 PF00563 EAL domain BB936_04215 PF08447 PAS fold BB936_04220 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BB936_04235 PF08946 Osmosensory transporter coiled coil BB936_04235 PF00083 Sugar (and other) transporter BB936_04250 PF02690 Na+/Pi-cotransporter BB936_04255 PF01156 Inosine-uridine preferring nucleoside hydrolase BB936_04260 PF00356 Bacterial regulatory proteins, lacI family BB936_04265 PF02371 Transposase IS116/IS110/IS902 family BB936_04265 PF01548 Transposase BB936_04270 PF07690 Major Facilitator Superfamily BB936_04270 PF00083 Sugar (and other) transporter BB936_04280 PF00392 Bacterial regulatory proteins, gntR family BB936_04280 PF00155 Aminotransferase class I and II BB936_04285 PF00892 EamA-like transporter family BB936_04300 PF01497 Periplasmic binding protein BB936_04305 PF01032 FecCD transport family BB936_04310 PF01032 FecCD transport family BB936_04320 PF00557 Metallopeptidase family M24 BB936_04340 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BB936_04340 PF00529 HlyD membrane-fusion protein of T1SS BB936_04345 PF04632 Fusaric acid resistance protein family BB936_04355 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain BB936_04355 PF01276 Orn/Lys/Arg decarboxylase, major domain BB936_04355 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BB936_04360 PF13520 Amino acid permease BB936_04385 PF12759 InsA C-terminal domain BB936_04385 PF03811 InsA N-terminal domain BB936_04405 PF00589 Phage integrase family BB936_04420 PF01276 Orn/Lys/Arg decarboxylase, major domain BB936_04420 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain BB936_04420 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BB936_04430 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain BB936_04430 PF01464 Transglycosylase SLT domain BB936_04435 PF04362 Bacterial Fe(2+) trafficking BB936_04440 PF14815 NUDIX domain BB936_04440 PF00730 HhH-GPD superfamily base excision DNA repair protein BB936_04440 PF00633 Helix-hairpin-helix motif BB936_04440 PF10576 Iron-sulfur binding domain of endonuclease III BB936_04445 PF02390 Putative methyltransferase BB936_04450 PF04320 Protein with unknown function (DUF469) BB936_04455 PF04960 Glutaminase BB936_04460 PF11101 Protein of unknown function (DUF2884) BB936_04465 PF04055 Radical SAM superfamily BB936_04465 PF06969 HemN C-terminal domain BB936_04470 PF01725 Ham1 family BB936_04475 PF02594 Uncharacterised ACR, YggU family COG1872 BB936_04480 PF02325 YGGT family BB936_04485 PF14748 Pyrroline-5-carboxylate reductase dimerisation BB936_04485 PF03807 NADP oxidoreductase coenzyme F420-dependent BB936_04490 PF01168 Alanine racemase, N-terminal domain BB936_04495 PF00437 Type II/IV secretion system protein BB936_04500 PF04371 Porphyromonas-type peptidyl-arginine deiminase BB936_04505 PF00795 Carbon-nitrogen hydrolase BB936_04510 PF03652 Holliday junction resolvase BB936_04515 PF02622 Uncharacterized ACR, COG1678 BB936_04520 PF02951 Prokaryotic glutathione synthetase, N-terminal domain BB936_04520 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain BB936_04525 PF04452 RNA methyltransferase BB936_04530 PF04231 Endonuclease I BB936_04535 PF10263 SprT-like family BB936_04535 PF17283 SprT-like zinc ribbon domain BB936_04545 PF04143 Sulphur transport BB936_04555 PF02773 S-adenosylmethionine synthetase, C-terminal domain BB936_04555 PF02772 S-adenosylmethionine synthetase, central domain BB936_04555 PF00438 S-adenosylmethionine synthetase, N-terminal domain BB936_04560 PF17810 Arginine decarboxylase helical bundle domain BB936_04560 PF17944 Arginine decarboxylase C-terminal helical extension BB936_04560 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BB936_04565 PF00355 Rieske [2Fe-2S] domain BB936_04570 PF01435 Peptidase family M48 BB936_04575 PF02780 Transketolase, C-terminal domain BB936_04575 PF00456 Transketolase, thiamine diphosphate binding domain BB936_04575 PF02779 Transketolase, pyrimidine binding domain BB936_04580 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BB936_04580 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BB936_04585 PF00162 Phosphoglycerate kinase BB936_04590 PF01116 Fructose-bisphosphate aldolase class-II BB936_04595 PF09013 YopH, N-terminal BB936_04595 PF00102 Protein-tyrosine phosphatase BB936_04600 PF05552 Conserved TM helix BB936_04600 PF00924 Mechanosensitive ion channel BB936_04605 PF01548 Transposase BB936_04605 PF02371 Transposase IS116/IS110/IS902 family BB936_04610 PF01810 LysE type translocator BB936_04615 PF04402 Protein of unknown function (DUF541) BB936_04620 PF03466 LysR substrate binding domain BB936_04620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BB936_04625 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BB936_04630 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BB936_04630 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BB936_04630 PF01842 ACT domain BB936_04665 PF04055 Radical SAM superfamily BB936_04685 PF01242 6-pyruvoyl tetrahydropterin synthase BB936_04690 PF00258 Flavodoxin BB936_04690 PF00175 Oxidoreductase NAD-binding domain BB936_04690 PF00667 FAD binding domain BB936_04695 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BB936_04695 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BB936_04700 PF01507 Phosphoadenosine phosphosulfate reductase family BB936_04715 PF04389 Peptidase family M28 BB936_04720 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BB936_04720 PF14824 Sirohaem biosynthesis protein central BB936_04720 PF10414 Sirohaem synthase dimerisation region BB936_04725 PF01507 Phosphoadenosine phosphosulfate reductase family BB936_04730 PF00009 Elongation factor Tu GTP binding domain BB936_04740 PF12084 Protein of unknown function (DUF3561) BB936_04745 PF04977 Septum formation initiator BB936_04750 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BB936_04755 PF02542 YgbB family BB936_04760 PF01142 tRNA pseudouridine synthase D (TruD) BB936_04765 PF01975 Survival protein SurE BB936_04775 PF01476 LysM domain BB936_04775 PF01551 Peptidase family M23 BB936_04780 PF00140 Sigma-70 factor, region 1.2 BB936_04780 PF04542 Sigma-70 region 2 BB936_04780 PF04545 Sigma-70, region 4 BB936_04780 PF04539 Sigma-70 region 3 BB936_04785 PF05188 MutS domain II BB936_04785 PF05192 MutS domain III BB936_04785 PF01624 MutS domain I BB936_04785 PF00488 MutS domain V BB936_04785 PF05190 MutS family domain IV BB936_04800 PF00419 Fimbrial protein BB936_04805 PF00419 Fimbrial protein BB936_04810 PF13954 PapC N-terminal domain BB936_04810 PF13953 PapC C-terminal domain BB936_04810 PF00577 Outer membrane usher protein BB936_04815 PF02753 Pili assembly chaperone PapD, C-terminal domain BB936_04815 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BB936_04825 PF00419 Fimbrial protein BB936_04830 PF00419 Fimbrial protein BB936_04855 PF00005 ABC transporter BB936_04855 PF00664 ABC transporter transmembrane region BB936_04855 PF03412 Peptidase C39 family BB936_04860 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BB936_04865 PF00005 ABC transporter BB936_04865 PF02687 FtsX-like permease family BB936_04865 PF12704 MacB-like periplasmic core domain BB936_04870 PF02321 Outer membrane efflux protein BB936_04875 PF02801 Beta-ketoacyl synthase, C-terminal domain BB936_04875 PF00109 Beta-ketoacyl synthase, N-terminal domain BB936_04895 PF01548 Transposase BB936_04895 PF02371 Transposase IS116/IS110/IS902 family BB936_04900 PF00155 Aminotransferase class I and II BB936_04905 PF00034 Cytochrome c BB936_04905 PF03150 Di-haem cytochrome c peroxidase BB936_04905 PF14376 Haem-binding domain BB936_04920 PF01022 Bacterial regulatory protein, arsR family BB936_04925 PF00107 Zinc-binding dehydrogenase BB936_04925 PF08240 Alcohol dehydrogenase GroES-like domain BB936_04930 PF03613 PTS system mannose/fructose/sorbose family IID component BB936_04935 PF03609 PTS system sorbose-specific iic component BB936_04945 PF03610 PTS system fructose IIA component BB936_04950 PF13936 Helix-turn-helix domain BB936_04950 PF04198 Putative sugar-binding domain BB936_04955 PF00795 Carbon-nitrogen hydrolase BB936_04975 PF00005 ABC transporter BB936_04980 PF00005 ABC transporter BB936_04985 PF02653 Branched-chain amino acid transport system / permease component BB936_04985 PF11862 Domain of unknown function (DUF3382) BB936_04990 PF02653 Branched-chain amino acid transport system / permease component BB936_04995 PF13458 Periplasmic binding protein BB936_05000 PF05683 Fumarase C-terminus BB936_05000 PF05681 Fumarate hydratase (Fumerase) BB936_05005 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BB936_05005 PF01568 Molydopterin dinucleotide binding domain BB936_05005 PF00384 Molybdopterin oxidoreductase BB936_05010 PF13247 4Fe-4S dicluster domain BB936_05010 PF12800 4Fe-4S binding domain BB936_05015 PF04976 DMSO reductase anchor subunit (DmsC) BB936_05020 PF02613 Nitrate reductase delta subunit BB936_05025 PF01548 Transposase BB936_05025 PF02371 Transposase IS116/IS110/IS902 family BB936_05030 PF07690 Major Facilitator Superfamily BB936_05035 PF02464 Competence-damaged protein BB936_05040 PF00154 recA bacterial DNA recombination protein BB936_05045 PF02631 RecX family BB936_05050 PF02272 DHHA1 domain BB936_05050 PF01411 tRNA synthetases class II (A) BB936_05050 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BB936_05055 PF02599 Global regulator protein family BB936_05075 PF13419 Haloacid dehalogenase-like hydrolase BB936_05085 PF04262 Glutamate-cysteine ligase BB936_05090 PF02664 S-Ribosylhomocysteinase (LuxS) BB936_05100 PF01578 Cytochrome C assembly protein BB936_05105 PF02881 SRP54-type protein, helical bundle domain BB936_05105 PF00448 SRP54-type protein, GTPase domain BB936_05105 PF02978 Signal peptide binding domain BB936_05110 PF00886 Ribosomal protein S16 BB936_05115 PF05239 PRC-barrel domain BB936_05115 PF01782 RimM N-terminal domain BB936_05120 PF01746 tRNA (Guanine-1)-methyltransferase BB936_05125 PF01245 Ribosomal protein L19 BB936_05140 PF00072 Response regulator receiver domain BB936_05140 PF04397 LytTr DNA-binding domain BB936_05145 PF00793 DAHP synthetase I family BB936_05150 PF01817 Chorismate mutase type II BB936_05150 PF02153 Prephenate dehydrogenase BB936_05155 PF01817 Chorismate mutase type II BB936_05155 PF00800 Prephenate dehydratase BB936_05160 PF01548 Transposase BB936_05160 PF02371 Transposase IS116/IS110/IS902 family BB936_05165 PF02861 Clp amino terminal domain, pathogenicity island component BB936_05165 PF17871 AAA lid domain BB936_05165 PF10431 C-terminal, D2-small domain, of ClpB protein BB936_05165 PF00004 ATPase family associated with various cellular activities (AAA) BB936_05165 PF07724 AAA domain (Cdc48 subfamily) BB936_05175 PF00849 RNA pseudouridylate synthase BB936_05175 PF01479 S4 domain BB936_05180 PF13525 Outer membrane lipoprotein BB936_05195 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BB936_05200 PF00872 Transposase, Mutator family BB936_05205 PF01548 Transposase BB936_05205 PF02371 Transposase IS116/IS110/IS902 family BB936_05230 PF10043 Predicted periplasmic lipoprotein (DUF2279) BB936_05235 PF13091 PLD-like domain BB936_05240 PF13607 Succinyl-CoA ligase like flavodoxin domain BB936_05240 PF13380 CoA binding domain BB936_05240 PF00583 Acetyltransferase (GNAT) family BB936_05250 PF00085 Thioredoxin BB936_05255 PF08032 RNA 2'-O ribose methyltransferase substrate binding BB936_05255 PF00588 SpoU rRNA Methylase family BB936_05260 PF02371 Transposase IS116/IS110/IS902 family BB936_05260 PF01548 Transposase BB936_05270 PF07690 Major Facilitator Superfamily BB936_05275 PF00529 HlyD membrane-fusion protein of T1SS BB936_05275 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BB936_05280 PF02321 Outer membrane efflux protein BB936_05285 PF01047 MarR family BB936_05290 PF05437 Branched-chain amino acid transport protein (AzlD) BB936_05295 PF03591 AzlC protein BB936_05300 PF07690 Major Facilitator Superfamily BB936_05315 PF01425 Amidase BB936_05330 PF00497 Bacterial extracellular solute-binding proteins, family 3 BB936_05335 PF00528 Binding-protein-dependent transport system inner membrane component BB936_05340 PF00528 Binding-protein-dependent transport system inner membrane component BB936_05345 PF00005 ABC transporter BB936_05360 PF00795 Carbon-nitrogen hydrolase BB936_05365 PF00155 Aminotransferase class I and II BB936_05370 PF00589 Phage integrase family BB936_05370 PF12167 Arm DNA-binding domain BB936_05380 PF05063 MT-A70 BB936_05485 PF01695 IstB-like ATP binding protein BB936_05565 PF06440 DNA polymerase III, theta subunit BB936_05640 PF17482 Phage tail sheath C-terminal domain BB936_05640 PF04984 Phage tail sheath protein subtilisin-like domain BB936_05700 PF00596 Class II Aldolase and Adducin N-terminal domain BB936_05710 PF03079 ARD/ARD' family BB936_05715 PF01008 Initiation factor 2 subunit family BB936_05720 PF01636 Phosphotransferase enzyme family BB936_05725 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB BB936_05725 PF08479 POTRA domain, ShlB-type BB936_05740 PF09317 Domain of unknown function (DUF1974) BB936_05740 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BB936_05740 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BB936_05745 PF13580 SIS domain BB936_05750 PF13230 Glutamine amidotransferases class-II BB936_05755 PF03734 L,D-transpeptidase catalytic domain BB936_05760 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) BB936_05760 PF11973 NQRA C-terminal domain BB936_05765 PF03116 NQR2, RnfD, RnfE family BB936_05770 PF04205 FMN-binding domain BB936_05775 PF02508 Rnf-Nqr subunit, membrane protein BB936_05780 PF02508 Rnf-Nqr subunit, membrane protein BB936_05785 PF00111 2Fe-2S iron-sulfur cluster binding domain BB936_05785 PF00175 Oxidoreductase NAD-binding domain BB936_05785 PF00970 Oxidoreductase FAD-binding domain BB936_05790 PF02424 ApbE family BB936_05795 PF04400 (Na+)-NQR maturation NqrM BB936_05800 PF03009 Glycerophosphoryl diester phosphodiesterase family BB936_05805 PF01820 D-ala D-ala ligase N-terminus BB936_05805 PF07478 D-ala D-ala ligase C-terminus BB936_05810 PF13309 HTH domain BB936_05810 PF08348 YheO-like PAS domain BB936_05815 PF00291 Pyridoxal-phosphate dependent enzyme BB936_05825 PF11798 IMS family HHH motif BB936_05825 PF11799 impB/mucB/samB family C-terminal domain BB936_05825 PF00817 impB/mucB/samB family BB936_05830 PF01546 Peptidase family M20/M25/M40 BB936_05830 PF07687 Peptidase dimerisation domain BB936_05835 PF00156 Phosphoribosyl transferase domain BB936_05840 PF02371 Transposase IS116/IS110/IS902 family BB936_05840 PF01548 Transposase BB936_05850 PF07417 Sigma factor-binding transcriptional regulator Crl BB936_05855 PF00696 Amino acid kinase family BB936_05855 PF01472 PUA domain BB936_05860 PF00171 Aldehyde dehydrogenase family BB936_05865 PF00392 Bacterial regulatory proteins, gntR family BB936_05865 PF07702 UTRA domain BB936_05870 PF02378 Phosphotransferase system, EIIC BB936_05870 PF00367 phosphotransferase system, EIIB BB936_05875 PF11975 Family 4 glycosyl hydrolase C-terminal domain BB936_05875 PF02056 Family 4 glycosyl hydrolase BB936_05880 PF07317 Flagellar regulator YcgR BB936_05880 PF07238 PilZ domain BB936_05885 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain BB936_05885 PF06165 Glycosyltransferase family 36 BB936_05885 PF10091 Putative glucoamylase BB936_05900 PF08241 Methyltransferase domain BB936_05920 PF00593 TonB dependent receptor BB936_05920 PF07715 TonB-dependent Receptor Plug Domain BB936_05925 PF01202 Shikimate kinase BB936_05930 PF06865 Pyrimidine/purine nucleoside phosphorylase BB936_05935 PF04381 Putative exonuclease, RdgC BB936_05940 PF00480 ROK family BB936_05945 PF13476 AAA domain BB936_05950 PF12320 Type 5 capsule protein repressor C-terminal domain BB936_05950 PF00149 Calcineurin-like phosphoesterase BB936_05955 PF00072 Response regulator receiver domain BB936_05955 PF00486 Transcriptional regulatory protein, C terminal BB936_05960 PF00512 His Kinase A (phospho-acceptor) domain BB936_05960 PF00989 PAS fold BB936_05960 PF11808 Phosphate regulon sensor protein PhoR BB936_05960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BB936_05965 PF12849 PBP superfamily domain BB936_05970 PF05525 Branched-chain amino acid transport protein BB936_05975 PF00324 Amino acid permease BB936_05980 PF02903 Alpha amylase, N-terminal ig-like domain BB936_05980 PF00128 Alpha amylase, catalytic domain BB936_05995 PF01848 Hok/gef family BB936_06000 PF10417 C-terminal domain of 1-Cys peroxiredoxin BB936_06000 PF00578 AhpC/TSA family BB936_06005 PF04336 Acyl carrier protein phosphodiesterase BB936_06010 PF02547 Queuosine biosynthesis protein BB936_06020 PF01548 Transposase BB936_06020 PF02371 Transposase IS116/IS110/IS902 family BB936_06025 PF01702 Queuine tRNA-ribosyltransferase BB936_06030 PF02699 Preprotein translocase subunit BB936_06035 PF13721 SecD export protein N-terminal TM region BB936_06035 PF07549 SecD/SecF GG Motif BB936_06035 PF02355 Protein export membrane protein BB936_06040 PF07549 SecD/SecF GG Motif BB936_06040 PF02355 Protein export membrane protein BB936_06055 PF03477 ATP cone domain BB936_06060 PF01872 RibD C-terminal domain BB936_06060 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BB936_06065 PF00885 6,7-dimethyl-8-ribityllumazine synthase BB936_06070 PF01029 NusB family BB936_06075 PF02769 AIR synthase related protein, C-terminal domain BB936_06075 PF00586 AIR synthase related protein, N-terminal domain BB936_06080 PF04608 Phosphatidylglycerophosphatase A BB936_06085 PF02371 Transposase IS116/IS110/IS902 family BB936_06085 PF01548 Transposase BB936_06090 PF02779 Transketolase, pyrimidine binding domain BB936_06090 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BB936_06090 PF02780 Transketolase, C-terminal domain BB936_06095 PF00348 Polyprenyl synthetase BB936_06100 PF02609 Exonuclease VII small subunit BB936_06105 PF02568 Thiamine biosynthesis protein (ThiI) BB936_06105 PF02926 THUMP domain BB936_06110 PF01965 DJ-1/PfpI family BB936_06115 PF08546 Ketopantoate reductase PanE/ApbA C terminal BB936_06115 PF02558 Ketopantoate reductase PanE/ApbA BB936_06120 PF04461 Protein of unknown function (DUF520) BB936_06125 PF07690 Major Facilitator Superfamily BB936_06130 PF01040 UbiA prenyltransferase family BB936_06135 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BB936_06140 PF00510 Cytochrome c oxidase subunit III BB936_06145 PF00115 Cytochrome C and Quinol oxidase polypeptide I BB936_06150 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BB936_06150 PF06481 COX Aromatic Rich Motif BB936_06155 PF03502 Nucleoside-specific channel-forming protein, Tsx BB936_06160 PF07690 Major Facilitator Superfamily BB936_06165 PF03923 Uncharacterized lipoprotein BB936_06165 PF08139 Prokaryotic membrane lipoprotein lipid attachment site BB936_06170 PF01722 BolA-like protein BB936_06180 PF05698 Bacterial trigger factor protein (TF) C-terminus BB936_06180 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BB936_06180 PF05697 Bacterial trigger factor protein (TF) BB936_06185 PF00574 Clp protease BB936_06190 PF10431 C-terminal, D2-small domain, of ClpB protein BB936_06190 PF06689 ClpX C4-type zinc finger BB936_06190 PF07724 AAA domain (Cdc48 subfamily) BB936_06195 PF00004 ATPase family associated with various cellular activities (AAA) BB936_06195 PF05362 Lon protease (S16) C-terminal proteolytic domain BB936_06195 PF02190 ATP-dependent protease La (LON) substrate-binding domain BB936_06200 PF00216 Bacterial DNA-binding protein BB936_06205 PF13145 PPIC-type PPIASE domain BB936_06220 PF06508 Queuosine biosynthesis protein QueC BB936_06240 PF01037 Lrp/AsnC ligand binding domain BB936_06240 PF13404 AsnC-type helix-turn-helix domain BB936_06245 PF00005 ABC transporter BB936_06245 PF00664 ABC transporter transmembrane region BB936_06250 PF00664 ABC transporter transmembrane region BB936_06250 PF00005 ABC transporter BB936_06255 PF00543 Nitrogen regulatory protein P-II BB936_06260 PF00909 Ammonium Transporter Family BB936_06270 PF09619 Type III secretion system lipoprotein chaperone (YscW) BB936_06275 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BB936_06285 PF05321 Haemolysin expression modulating protein BB936_06290 PF10757 Biofilm formation regulator YbaJ BB936_06300 PF00005 ABC transporter BB936_06305 PF00950 ABC 3 transport family BB936_06310 PF01297 Zinc-uptake complex component A periplasmic BB936_06315 PF00444 Ribosomal protein L36 BB936_06320 PF01197 Ribosomal protein L31 BB936_06325 PF10797 Protein of unknown function BB936_06330 PF10941 Protein of unknown function DUF2620 BB936_06335 PF01676 Metalloenzyme superfamily BB936_06340 PF01168 Alanine racemase, N-terminal domain BB936_06350 PF00873 AcrB/AcrD/AcrF family BB936_06355 PF00529 HlyD membrane-fusion protein of T1SS BB936_06355 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BB936_06360 PF08361 MAATS-type transcriptional repressor, C-terminal region BB936_06360 PF00440 Bacterial regulatory proteins, tetR family BB936_06365 PF02635 DsrE/DsrF-like family BB936_06375 PF10689 Protein of unknown function (DUF2496) BB936_06385 PF04304 Protein of unknown function (DUF454) BB936_06390 PF00156 Phosphoribosyl transferase domain BB936_06395 PF12170 DNA polymerase III tau subunit V interacting with alpha BB936_06395 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding BB936_06395 PF12169 DNA polymerase III subunits gamma and tau domain III BB936_06400 PF02575 YbaB/EbfC DNA-binding family BB936_06405 PF02132 RecR protein BB936_06405 PF13662 Toprim domain BB936_06410 PF00183 Hsp90 protein BB936_06410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BB936_06415 PF05191 Adenylate kinase, active site lid BB936_06420 PF00762 Ferrochelatase BB936_06430 PF00535 Glycosyl transferase family 2 BB936_06430 PF01501 Glycosyl transferase family 8 BB936_06435 PF00535 Glycosyl transferase family 2 BB936_06440 PF00534 Glycosyl transferases group 1 BB936_06440 PF13439 Glycosyltransferase Family 4 BB936_06445 PF13439 Glycosyltransferase Family 4 BB936_06445 PF00534 Glycosyl transferases group 1 BB936_06450 PF00953 Glycosyl transferase family 4 BB936_06455 PF02719 Polysaccharide biosynthesis protein BB936_06460 PF00534 Glycosyl transferases group 1 BB936_06460 PF13439 Glycosyltransferase Family 4 BB936_06465 PF16363 GDP-mannose 4,6 dehydratase BB936_06470 PF00294 pfkB family carbohydrate kinase BB936_06475 PF02254 TrkA-N domain BB936_06475 PF00999 Sodium/hydrogen exchanger family BB936_06480 PF07690 Major Facilitator Superfamily BB936_06495 PF04073 Aminoacyl-tRNA editing domain BB936_06500 PF01963 TraB family BB936_06505 PF00403 Heavy-metal-associated domain BB936_06510 PF13411 MerR HTH family regulatory protein BB936_06515 PF01957 NfeD-like C-terminal, partner-binding BB936_06520 PF16200 C-terminal region of band_7 BB936_06520 PF01145 SPFH domain / Band 7 family BB936_06525 PF00085 Thioredoxin BB936_06530 PF00106 short chain dehydrogenase BB936_06535 PF13472 GDSL-like Lipase/Acylhydrolase family BB936_06540 PF00005 ABC transporter BB936_06550 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BB936_06550 PF02222 ATP-grasp domain BB936_06555 PF00731 AIR carboxylase BB936_06560 PF00149 Calcineurin-like phosphoesterase BB936_06565 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BB936_06570 PF01406 tRNA synthetases class I (C) catalytic domain BB936_06570 PF09190 DALR domain BB936_06580 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BB936_06580 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BB936_06595 PF05063 MT-A70 BB936_06640 PF06630 Enterobacterial exodeoxyribonuclease VIII BB936_06640 PF12684 PDDEXK-like domain of unknown function (DUF3799) BB936_06700 PF01381 Helix-turn-helix BB936_06700 PF00717 Peptidase S24-like BB936_06725 PF00772 DnaB-like helicase N terminal domain BB936_06725 PF03796 DnaB-like helicase C terminal domain BB936_06775 PF00149 Calcineurin-like phosphoesterase BB936_06820 PF03245 Bacteriophage Rz lysis protein BB936_06845 PF00293 NUDIX domain BB936_06950 PF01757 Acyltransferase family BB936_06955 PF00589 Phage integrase family BB936_06955 PF13356 Arm DNA-binding domain BB936_06955 PF14659 Phage integrase, N-terminal SAM-like domain BB936_06960 PF14659 Phage integrase, N-terminal SAM-like domain BB936_06960 PF00589 Phage integrase family BB936_06960 PF13356 Arm DNA-binding domain BB936_06975 PF13784 Fic/DOC family N-terminal BB936_06975 PF02661 Fic/DOC family BB936_07030 PF00717 Peptidase S24-like BB936_07040 PF00072 Response regulator receiver domain BB936_07040 PF00486 Transcriptional regulatory protein, C terminal BB936_07055 PF08007 Cupin superfamily protein BB936_07065 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase BB936_07070 PF00005 ABC transporter BB936_07070 PF00664 ABC transporter transmembrane region BB936_07085 PF00149 Calcineurin-like phosphoesterase BB936_07100 PF00313 'Cold-shock' DNA-binding domain BB936_07105 PF00313 'Cold-shock' DNA-binding domain BB936_07110 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BB936_07115 PF05230 MASE2 domain BB936_07115 PF00990 Diguanylate cyclase, GGDEF domain BB936_07120 PF02416 mttA/Hcf106 family BB936_07125 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family BB936_07125 PF04055 Radical SAM superfamily BB936_07130 PF03099 Biotin/lipoate A/B protein ligase family BB936_07135 PF04359 Protein of unknown function (DUF493) BB936_07140 PF00768 D-alanyl-D-alanine carboxypeptidase BB936_07140 PF07943 Penicillin-binding protein 5, C-terminal domain BB936_07145 PF03330 Lytic transglycolase BB936_07145 PF05036 Sporulation related domain BB936_07150 PF01098 Cell cycle protein BB936_07155 PF03717 Penicillin-binding Protein dimerisation domain BB936_07155 PF00905 Penicillin binding protein transpeptidase domain BB936_07160 PF02590 Predicted SPOUT methyltransferase BB936_07170 PF01467 Cytidylyltransferase-like BB936_07175 PF14840 Processivity clamp loader gamma complex DNA pol III C-term BB936_07175 PF06144 DNA polymerase III, delta subunit BB936_07180 PF04390 Lipopolysaccharide-assembly BB936_07185 PF00133 tRNA synthetases class I (I, L, M and V) BB936_07185 PF08264 Anticodon-binding domain of tRNA BB936_07185 PF13603 Leucyl-tRNA synthetase, Domain 2 BB936_07190 PF07295 Zinc-ribbon containing domain BB936_07195 PF00005 ABC transporter BB936_07200 PF00528 Binding-protein-dependent transport system inner membrane component BB936_07205 PF00528 Binding-protein-dependent transport system inner membrane component BB936_07210 PF00497 Bacterial extracellular solute-binding proteins, family 3 BB936_07220 PF00795 Carbon-nitrogen hydrolase BB936_07225 PF03471 Transporter associated domain BB936_07225 PF00571 CBS domain BB936_07235 PF02562 PhoH-like protein BB936_07240 PF00919 Uncharacterized protein family UPF0004 BB936_07240 PF01938 TRAM domain BB936_07240 PF04055 Radical SAM superfamily BB936_07245 PF01494 FAD binding domain BB936_07280 PF00733 Asparagine synthase BB936_07280 PF13537 Glutamine amidotransferase domain BB936_07285 PF13344 Haloacid dehalogenase-like hydrolase BB936_07290 PF01047 MarR family BB936_07290 PF00480 ROK family BB936_07295 PF01979 Amidohydrolase family BB936_07300 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BB936_07305 PF00367 phosphotransferase system, EIIB BB936_07305 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BB936_07305 PF02378 Phosphotransferase system, EIIC BB936_07310 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain BB936_07310 PF00749 tRNA synthetases class I (E and Q), catalytic domain BB936_07315 PF03573 outer membrane porin, OprD family BB936_07320 PF13982 YbfN-like lipoprotein BB936_07325 PF03173 Putative carbohydrate binding domain BB936_07325 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain BB936_07325 PF00728 Glycosyl hydrolase family 20, catalytic domain BB936_07325 PF02838 Glycosyl hydrolase family 20, domain 2 BB936_07330 PF01475 Ferric uptake regulator family BB936_07335 PF00258 Flavodoxin BB936_07340 PF02203 Tar ligand binding domain homologue BB936_07340 PF00672 HAMP domain BB936_07340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BB936_07345 PF01402 Ribbon-helix-helix protein, copG family BB936_07350 PF12697 Alpha/beta hydrolase family BB936_07355 PF03925 SeqA protein C-terminal domain BB936_07355 PF17206 SeqA protein N-terminal domain BB936_07360 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BB936_07360 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BB936_07360 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BB936_07360 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BB936_07370 PF00892 EamA-like transporter family BB936_07375 PF00486 Transcriptional regulatory protein, C terminal BB936_07375 PF00072 Response regulator receiver domain BB936_07380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BB936_07380 PF00512 His Kinase A (phospho-acceptor) domain BB936_07380 PF13492 GAF domain BB936_07380 PF13493 Domain of unknown function (DUF4118) BB936_07380 PF02702 Osmosensitive K+ channel His kinase sensor domain BB936_07385 PF02669 K+-transporting ATPase, c chain BB936_07395 PF03814 Potassium-transporting ATPase A subunit BB936_07400 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) BB936_07405 PF10725 Protein of unknown function (DUF2517) BB936_07415 PF02794 RTX toxin acyltransferase family BB936_07425 PF08349 Protein of unknown function (DUF1722) BB936_07430 PF03441 FAD binding domain of DNA photolyase BB936_07430 PF00875 DNA photolyase BB936_07435 PF02112 cAMP phosphodiesterases class-II BB936_07440 PF01784 NIF3 (NGG1p interacting factor 3) BB936_07445 PF02682 Carboxyltransferase domain, subdomain C and D BB936_07450 PF02626 Carboxyltransferase domain, subdomain A and B BB936_07455 PF03746 LamB/YcsF family BB936_07470 PF01470 Pyroglutamyl peptidase BB936_07475 PF00285 Citrate synthase, C-terminal domain BB936_07480 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BB936_07485 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BB936_07490 PF02910 Fumarate reductase flavoprotein C-term BB936_07490 PF00890 FAD binding domain BB936_07495 PF13085 2Fe-2S iron-sulfur cluster binding domain BB936_07500 PF02779 Transketolase, pyrimidine binding domain BB936_07500 PF16870 2-oxoglutarate dehydrogenase C-terminal BB936_07500 PF00676 Dehydrogenase E1 component BB936_07500 PF16078 2-oxoglutarate dehydrogenase N-terminus BB936_07505 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BB936_07505 PF00364 Biotin-requiring enzyme BB936_07505 PF02817 e3 binding domain BB936_07510 PF08442 ATP-grasp domain BB936_07510 PF00549 CoA-ligase BB936_07515 PF00549 CoA-ligase BB936_07515 PF02629 CoA binding domain BB936_07520 PF02872 5'-nucleotidase, C-terminal domain BB936_07520 PF00149 Calcineurin-like phosphoesterase BB936_07525 PF01654 Cytochrome bd terminal oxidase subunit I BB936_07530 PF02322 Cytochrome bd terminal oxidase subunit II BB936_07535 PF08173 Membrane bound YbgT-like protein BB936_07540 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) BB936_07545 PF03061 Thioesterase superfamily BB936_07550 PF01618 MotA/TolQ/ExbB proton channel family BB936_07555 PF02472 Biopolymer transport protein ExbD/TolR BB936_07560 PF06519 TolA C-terminal BB936_07560 PF06519 TolA C-terminal BB936_07565 PF07676 WD40-like Beta Propeller Repeat BB936_07565 PF04052 TolB amino-terminal domain BB936_07570 PF00691 OmpA family BB936_07575 PF16331 TolA binding protein trimerisation BB936_07575 PF13174 Tetratricopeptide repeat BB936_07595 PF02445 Quinolinate synthetase A protein BB936_07600 PF04973 Nicotinamide mononucleotide transporter BB936_07605 PF01545 Cation efflux family BB936_07610 PF00793 DAHP synthetase I family BB936_07615 PF00300 Histidine phosphatase superfamily (branch 1) BB936_07620 PF01223 DNA/RNA non-specific endonuclease BB936_07640 PF01263 Aldose 1-epimerase BB936_07645 PF00288 GHMP kinases N terminal domain BB936_07645 PF08544 GHMP kinases C terminal BB936_07645 PF10509 Galactokinase galactose-binding signature BB936_07650 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain BB936_07650 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain BB936_07655 PF16363 GDP-mannose 4,6 dehydratase BB936_07665 PF00005 ABC transporter BB936_07670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BB936_07670 PF03459 TOBE domain BB936_07675 PF10766 Multidrug efflux pump-associated protein AcrZ BB936_07685 PF13356 Arm DNA-binding domain BB936_07685 PF00589 Phage integrase family BB936_07705 PF10431 C-terminal, D2-small domain, of ClpB protein BB936_07705 PF07724 AAA domain (Cdc48 subfamily) BB936_07705 PF06689 ClpX C4-type zinc finger BB936_07780 PF01381 Helix-turn-helix BB936_07780 PF00717 Peptidase S24-like BB936_07805 PF01695 IstB-like ATP binding protein BB936_07810 PF00772 DnaB-like helicase N terminal domain BB936_07810 PF03796 DnaB-like helicase C terminal domain BB936_07825 PF00959 Phage lysozyme BB936_07985 PF00528 Binding-protein-dependent transport system inner membrane component BB936_07990 PF03459 TOBE domain BB936_07990 PF00005 ABC transporter BB936_08000 PF10282 Lactonase, 7-bladed beta-propeller BB936_08005 PF00202 Aminotransferase class-III BB936_08010 PF06968 Biotin and Thiamin Synthesis associated domain BB936_08010 PF04055 Radical SAM superfamily BB936_08015 PF00155 Aminotransferase class I and II BB936_08020 PF08241 Methyltransferase domain BB936_08030 PF00005 ABC transporter BB936_08035 PF00271 Helicase conserved C-terminal domain BB936_08035 PF17757 UvrB interaction domain BB936_08035 PF12344 Ultra-violet resistance protein B BB936_08035 PF02151 UvrB/uvrC motif BB936_08035 PF04851 Type III restriction enzyme, res subunit BB936_08040 PF09905 DNA-binding protein VF530 BB936_08045 PF01933 Uncharacterised protein family UPF0052 BB936_08050 PF04055 Radical SAM superfamily BB936_08050 PF06463 Molybdenum Cofactor Synthesis C BB936_08055 PF01967 MoaC family BB936_08060 PF02597 ThiS family BB936_08065 PF02391 MoaE protein BB936_08070 PF01027 Inhibitor of apoptosis-promoting Bax1 BB936_08085 PF00005 ABC transporter BB936_08090 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BB936_08095 PF00440 Bacterial regulatory proteins, tetR family BB936_08095 PF09209 Tetracyclin repressor-like, C-terminal domain BB936_08100 PF00270 DEAD/DEAH box helicase BB936_08100 PF00271 Helicase conserved C-terminal domain BB936_08105 PF01207 Dihydrouridine synthase (Dus) BB936_08115 PF03448 MgtE intracellular N domain BB936_08115 PF01769 Divalent cation transporter BB936_08115 PF00571 CBS domain BB936_08120 PF00768 D-alanyl-D-alanine carboxypeptidase BB936_08125 PF09330 D-lactate dehydrogenase, membrane binding BB936_08125 PF01565 FAD binding domain BB936_08130 PF01928 CYTH domain BB936_08135 PF01844 HNH endonuclease BB936_08145 PF04226 Transglycosylase associated protein BB936_08150 PF00005 ABC transporter BB936_08160 PF00528 Binding-protein-dependent transport system inner membrane component BB936_08165 PF00528 Binding-protein-dependent transport system inner membrane component BB936_08170 PF07308 Protein of unknown function (DUF1456) BB936_08180 PF02653 Branched-chain amino acid transport system / permease component BB936_08185 PF02653 Branched-chain amino acid transport system / permease component BB936_08190 PF00005 ABC transporter BB936_08195 PF00005 ABC transporter BB936_08200 PF00581 Rhodanese-like domain BB936_08215 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BB936_08220 PF00528 Binding-protein-dependent transport system inner membrane component BB936_08225 PF00005 ABC transporter BB936_08230 PF00528 Binding-protein-dependent transport system inner membrane component BB936_08245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BB936_08245 PF03466 LysR substrate binding domain BB936_08255 PF00892 EamA-like transporter family BB936_08265 PF00267 Gram-negative porin BB936_08270 PF13307 Helicase C-terminal domain BB936_08270 PF06733 DEAD_2 BB936_08275 PF00230 Major intrinsic protein BB936_08280 PF02885 Glycosyl transferase family, helical bundle domain BB936_08300 PF05971 RNA methyltransferase BB936_08305 PF13426 PAS domain BB936_08305 PF08447 PAS fold BB936_08305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BB936_08315 PF00005 ABC transporter BB936_08325 PF00497 Bacterial extracellular solute-binding proteins, family 3 BB936_08330 PF01258 Prokaryotic dksA/traR C4-type zinc finger BB936_08335 PF00210 Ferritin-like domain BB936_08340 PF13847 Methyltransferase domain BB936_08355 PF02469 Fasciclin domain BB936_08365 PF00892 EamA-like transporter family BB936_08375 PF13505 Outer membrane protein beta-barrel domain BB936_08395 PF00005 ABC transporter BB936_08395 PF12848 ABC transporter BB936_08400 PF02371 Transposase IS116/IS110/IS902 family BB936_08400 PF01548 Transposase BB936_08405 PF00899 ThiF family BB936_08410 PF00994 Probable molybdopterin binding domain BB936_08410 PF03454 MoeA C-terminal region (domain IV) BB936_08410 PF03453 MoeA N-terminal region (domain I and II) BB936_08425 PF12704 MacB-like periplasmic core domain BB936_08425 PF02687 FtsX-like permease family BB936_08425 PF00005 ABC transporter BB936_08445 PF00756 Putative esterase BB936_08450 PF00107 Zinc-binding dehydrogenase BB936_08450 PF08240 Alcohol dehydrogenase GroES-like domain BB936_08455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BB936_08455 PF03466 LysR substrate binding domain BB936_08460 PF06779 Uncharacterised MFS-type transporter YbfB BB936_08465 PF01227 GTP cyclohydrolase I BB936_08470 PF04235 Protein of unknown function (DUF418) BB936_08475 PF00356 Bacterial regulatory proteins, lacI family BB936_08480 PF13407 Periplasmic binding protein domain BB936_08485 PF00005 ABC transporter BB936_08490 PF02653 Branched-chain amino acid transport system / permease component BB936_08495 PF01590 GAF domain BB936_08495 PF00158 Sigma-54 interaction domain BB936_08505 PF12800 4Fe-4S binding domain BB936_08505 PF13247 4Fe-4S dicluster domain BB936_08510 PF01750 Hydrogenase maturation protease BB936_08515 PF07450 Formate hydrogenlyase maturation protein HycH BB936_08520 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BB936_08525 PF12838 4Fe-4S dicluster domain BB936_08530 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit BB936_08530 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BB936_08530 PF00374 Nickel-dependent hydrogenase BB936_08535 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BB936_08535 PF00361 Proton-conducting membrane transporter BB936_08540 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BB936_08545 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BB936_08545 PF00361 Proton-conducting membrane transporter BB936_08550 PF00146 NADH dehydrogenase BB936_08555 PF00361 Proton-conducting membrane transporter BB936_08560 PF00037 4Fe-4S binding domain BB936_08560 PF12798 4Fe-4S binding domain BB936_08565 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA BB936_08570 PF01455 HupF/HypC family BB936_08575 PF02698 DUF218 domain BB936_08580 PF03949 Malic enzyme, NAD binding domain BB936_08580 PF00390 Malic enzyme, N-terminal domain BB936_08590 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region BB936_08590 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BB936_08595 PF04172 LrgB-like family BB936_08600 PF03788 LrgA family BB936_08605 PF07690 Major Facilitator Superfamily BB936_08625 PF09334 tRNA synthetases class I (M) BB936_08625 PF01588 Putative tRNA binding domain BB936_08630 PF10609 NUBPL iron-transfer P-loop NTPase BB936_08635 PF00485 Phosphoribulokinase / Uridine kinase family BB936_08640 PF00692 dUTPase BB936_08645 PF05170 AsmA family BB936_08650 PF03606 C4-dicarboxylate anaerobic carrier BB936_08655 PF03741 Integral membrane protein TerC family BB936_08655 PF03471 Transporter associated domain BB936_08655 PF00571 CBS domain BB936_08670 PF00483 Nucleotidyl transferase BB936_08675 PF00535 Glycosyl transferase family 2 BB936_08685 PF01061 ABC-2 type transporter BB936_08690 PF00005 ABC transporter BB936_08695 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase BB936_08700 PF01370 NAD dependent epimerase/dehydratase family BB936_08705 PF00534 Glycosyl transferases group 1 BB936_08705 PF00535 Glycosyl transferase family 2 BB936_08720 PF00872 Transposase, Mutator family BB936_08745 PF00483 Nucleotidyl transferase BB936_08750 PF00483 Nucleotidyl transferase BB936_08760 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BB936_08760 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BB936_08765 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BB936_08765 PF01502 Phosphoribosyl-AMP cyclohydrolase BB936_08770 PF00977 Histidine biosynthesis protein BB936_08775 PF00977 Histidine biosynthesis protein BB936_08780 PF00117 Glutamine amidotransferase class-I BB936_08785 PF00475 Imidazoleglycerol-phosphate dehydratase BB936_08790 PF00155 Aminotransferase class I and II BB936_08795 PF00815 Histidinol dehydrogenase BB936_08800 PF08029 HisG, C-terminal domain BB936_08800 PF01634 ATP phosphoribosyltransferase BB936_08805 PF01370 NAD dependent epimerase/dehydratase family BB936_08810 PF01548 Transposase BB936_08810 PF02371 Transposase IS116/IS110/IS902 family BB936_08815 PF02653 Branched-chain amino acid transport system / permease component BB936_08820 PF00005 ABC transporter BB936_08825 PF00465 Iron-containing alcohol dehydrogenase BB936_08835 PF13520 Amino acid permease BB936_08840 PF00929 Exonuclease BB936_08840 PF08411 Exonuclease C-terminal BB936_08845 PF00550 Phosphopantetheine attachment site BB936_08845 PF07993 Male sterility protein BB936_08845 PF00501 AMP-binding enzyme BB936_08850 PF04632 Fusaric acid resistance protein family BB936_08855 PF04363 Protein of unknown function (DUF496) BB936_08860 PF02653 Branched-chain amino acid transport system / permease component BB936_08865 PF02653 Branched-chain amino acid transport system / permease component BB936_08875 PF13407 Periplasmic binding protein domain BB936_08880 PF00288 GHMP kinases N terminal domain BB936_08885 PF00155 Aminotransferase class I and II BB936_08890 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BB936_08890 PF10414 Sirohaem synthase dimerisation region BB936_08890 PF14824 Sirohaem biosynthesis protein central BB936_08895 PF00871 Acetokinase family BB936_08900 PF10662 Ethanolamine utilisation - propanediol utilisation BB936_08905 PF00936 BMC domain BB936_08915 PF06130 Phosphate propanoyltransferase BB936_08925 PF00936 BMC domain BB936_08935 PF18427 DD-reactivating factor swiveling domain BB936_08935 PF08841 Diol dehydratase reactivase ATPase-like domain BB936_08940 PF02287 Dehydratase small subunit BB936_08945 PF02288 Dehydratase medium subunit BB936_08950 PF02286 Dehydratase large subunit BB936_08955 PF00936 BMC domain BB936_08960 PF00936 BMC domain BB936_08965 PF00230 Major intrinsic protein BB936_08970 PF12833 Helix-turn-helix domain BB936_08970 PF10114 Sensory domain found in PocR BB936_08975 PF07685 CobB/CobQ-like glutamine amidotransferase domain BB936_08975 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BB936_08985 PF02570 Precorrin-8X methylmutase BB936_08990 PF01888 CbiD BB936_08995 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BB936_09000 PF05175 Methyltransferase small domain BB936_09005 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BB936_09010 PF01890 Cobalamin synthesis G C-terminus BB936_09010 PF11761 Cobalamin biosynthesis central region BB936_09010 PF11760 Cobalamin synthesis G N-terminal BB936_09015 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BB936_09020 PF02571 Precorrin-6x reductase CbiJ/CobK BB936_09025 PF06180 Cobalt chelatase (CbiK) BB936_09030 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BB936_09035 PF01891 Cobalt uptake substrate-specific transmembrane region BB936_09040 PF02553 Cobalt transport protein component CbiN BB936_09045 PF02361 Cobalt transport protein BB936_09050 PF00005 ABC transporter BB936_09055 PF07685 CobB/CobQ-like glutamine amidotransferase domain BB936_09065 PF02654 Cobalamin-5-phosphate synthase BB936_09070 PF00300 Histidine phosphatase superfamily (branch 1) BB936_09075 PF02277 Phosphoribosyltransferase BB936_09135 PF07724 AAA domain (Cdc48 subfamily) BB936_09135 PF00004 ATPase family associated with various cellular activities (AAA) BB936_09135 PF10431 C-terminal, D2-small domain, of ClpB protein BB936_09135 PF17871 AAA lid domain BB936_09140 PF00419 Fimbrial protein BB936_09145 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BB936_09145 PF02753 Pili assembly chaperone PapD, C-terminal domain BB936_09195 PF04717 Type VI secretion system, phage-baseplate injector BB936_09220 PF00764 Arginosuccinate synthase BB936_09225 PF01554 MatE BB936_09235 PF02581 Thiamine monophosphate synthase BB936_09245 PF08220 DeoR-like helix-turn-helix domain BB936_09245 PF00455 DeoR C terminal sensor domain BB936_09250 PF00144 Beta-lactamase BB936_09255 PF01584 CheW-like domain BB936_09255 PF00072 Response regulator receiver domain BB936_09265 PF00155 Aminotransferase class I and II BB936_09265 PF00392 Bacterial regulatory proteins, gntR family BB936_09275 PF02558 Ketopantoate reductase PanE/ApbA BB936_09275 PF08546 Ketopantoate reductase PanE/ApbA C terminal BB936_09285 PF08402 TOBE domain BB936_09285 PF00005 ABC transporter BB936_09290 PF00528 Binding-protein-dependent transport system inner membrane component BB936_09300 PF07690 Major Facilitator Superfamily BB936_09305 PF05231 MASE1 BB936_09305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BB936_09305 PF07730 Histidine kinase BB936_09310 PF00196 Bacterial regulatory proteins, luxR family BB936_09310 PF00072 Response regulator receiver domain BB936_09315 PF12431 Transcriptional regulator BB936_09315 PF00072 Response regulator receiver domain BB936_09320 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BB936_09320 PF17203 Single cache domain 3 BB936_09320 PF00989 PAS fold BB936_09320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BB936_09335 PF08218 Citrate lyase ligase C-terminal domain BB936_09340 PF06857 Malonate decarboxylase delta subunit (MdcD) BB936_09345 PF03328 HpcH/HpaI aldolase/citrate lyase family BB936_09350 PF04223 Citrate lyase, alpha subunit (CitF) BB936_09355 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase BB936_09355 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase BB936_09360 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase BB936_09365 PF00939 Sodium:sulfate symporter transmembrane region BB936_09380 PF03480 Bacterial extracellular solute-binding protein, family 7 BB936_09390 PF01648 4'-phosphopantetheinyl transferase superfamily BB936_09390 PF17837 4'-phosphopantetheinyl transferase N-terminal domain BB936_09400 PF00083 Sugar (and other) transporter BB936_09405 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BB936_09405 PF00381 PTS HPr component phosphorylation site BB936_09410 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) BB936_09430 PF02753 Pili assembly chaperone PapD, C-terminal domain BB936_09430 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BB936_09440 PF13954 PapC N-terminal domain BB936_09440 PF13953 PapC C-terminal domain BB936_09440 PF00577 Outer membrane usher protein BB936_09445 PF02753 Pili assembly chaperone PapD, C-terminal domain BB936_09445 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BB936_09470 PF06167 Glucose-regulated metallo-peptidase M90 BB936_09480 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BB936_09480 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BB936_09505 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BB936_09510 PF01548 Transposase BB936_09510 PF02371 Transposase IS116/IS110/IS902 family BB936_09515 PF00483 Nucleotidyl transferase BB936_09525 PF14001 YdfZ protein BB936_09540 PF10777 Inner membrane protein YlaC BB936_09545 PF08240 Alcohol dehydrogenase GroES-like domain BB936_09545 PF02801 Beta-ketoacyl synthase, C-terminal domain BB936_09545 PF00109 Beta-ketoacyl synthase, N-terminal domain BB936_09545 PF14765 Polyketide synthase dehydratase BB936_09545 PF00550 Phosphopantetheine attachment site BB936_09545 PF16197 Ketoacyl-synthetase C-terminal extension BB936_09545 PF00107 Zinc-binding dehydrogenase BB936_09545 PF00698 Acyl transferase domain BB936_09545 PF08659 KR domain BB936_09550 PF00872 Transposase, Mutator family BB936_09555 PF02837 Glycosyl hydrolases family 2, sugar binding domain BB936_09555 PF02929 Beta galactosidase small chain BB936_09555 PF02836 Glycosyl hydrolases family 2, TIM barrel domain BB936_09555 PF16353 Domain of unknown function(DUF4981) BB936_09555 PF00703 Glycosyl hydrolases family 2 BB936_09560 PF00356 Bacterial regulatory proteins, lacI family BB936_09565 PF00313 'Cold-shock' DNA-binding domain BB936_09570 PF10781 Dextransucrase DSRB BB936_09575 PF02203 Tar ligand binding domain homologue BB936_09575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BB936_09575 PF00672 HAMP domain BB936_09590 PF02308 MgtC family BB936_09595 PF00690 Cation transporter/ATPase, N-terminus BB936_09595 PF00689 Cation transporting ATPase, C-terminus BB936_09600 PF16884 N-terminal domain of oxidoreductase BB936_09600 PF00107 Zinc-binding dehydrogenase BB936_09605 PF00582 Universal stress protein family BB936_09610 PF05247 Flagellar transcriptional activator (FlhD) BB936_09615 PF05280 Flagellar transcriptional activator (FlhC) BB936_09620 PF01618 MotA/TolQ/ExbB proton channel family BB936_09625 PF00691 OmpA family BB936_09625 PF13677 Membrane MotB of proton-channel complex MotA/MotB BB936_09630 PF01584 CheW-like domain BB936_09630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BB936_09630 PF01627 Hpt domain BB936_09630 PF02895 Signal transducing histidine kinase, homodimeric domain BB936_09630 PF09078 CheY binding BB936_09635 PF01584 CheW-like domain BB936_09640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BB936_09640 PF02203 Tar ligand binding domain homologue BB936_09640 PF00672 HAMP domain BB936_09645 PF00672 HAMP domain BB936_09645 PF02203 Tar ligand binding domain homologue BB936_09645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BB936_09650 PF01739 CheR methyltransferase, SAM binding domain BB936_09650 PF03705 CheR methyltransferase, all-alpha domain BB936_09655 PF01339 CheB methylesterase BB936_09655 PF00072 Response regulator receiver domain BB936_09660 PF00072 Response regulator receiver domain BB936_09665 PF04344 Chemotaxis phosphatase, CheZ BB936_09675 PF01312 FlhB HrpN YscU SpaS Family BB936_09680 PF00771 FHIPEP family BB936_09685 PF06366 Flagellar protein FlhE BB936_09695 PF05130 FlgN protein BB936_09700 PF04316 Anti-sigma-28 factor, FlgM BB936_09705 PF17656 FlgA N-terminal domain BB936_09705 PF13144 Chaperone for flagella basal body P-ring formation BB936_09710 PF00460 Flagella basal body rod protein BB936_09715 PF00460 Flagella basal body rod protein BB936_09715 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BB936_09720 PF13861 FlgD Tudor-like domain BB936_09720 PF13860 FlgD Ig-like domain BB936_09720 PF03963 Flagellar hook capping protein - N-terminal region BB936_09725 PF00460 Flagella basal body rod protein BB936_09725 PF07559 Flagellar basal body protein FlaE BB936_09725 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BB936_09730 PF00460 Flagella basal body rod protein BB936_09730 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BB936_09735 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BB936_09735 PF00460 Flagella basal body rod protein BB936_09740 PF02107 Flagellar L-ring protein BB936_09745 PF02119 Flagellar P-ring protein BB936_09750 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BB936_09750 PF10135 Rod binding protein BB936_09755 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BB936_09755 PF00460 Flagella basal body rod protein BB936_09760 PF00669 Bacterial flagellin N-terminal helical region BB936_09765 PF01311 Bacterial export proteins, family 1 BB936_09770 PF01313 Bacterial export proteins, family 3 BB936_09775 PF00813 FliP family BB936_09780 PF04347 Flagellar biosynthesis protein, FliO BB936_09785 PF16973 Flagellar motor switch protein FliN N-terminal BB936_09785 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BB936_09790 PF02154 Flagellar motor switch protein FliM BB936_09790 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BB936_09795 PF03748 Flagellar basal body-associated protein FliL BB936_09800 PF02120 Flagellar hook-length control protein FliK BB936_09805 PF02050 Flagellar FliJ protein BB936_09810 PF18269 T3SS EscN ATPase C-terminal domain BB936_09810 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BB936_09815 PF02108 Flagellar assembly protein FliH BB936_09820 PF01706 FliG C-terminal domain BB936_09820 PF14842 FliG N-terminal domain BB936_09820 PF14841 FliG middle domain BB936_09825 PF01514 Secretory protein of YscJ/FliF family BB936_09825 PF08345 Flagellar M-ring protein C-terminal BB936_09830 PF02049 Flagellar hook-basal body complex protein FliE BB936_09835 PF12167 Arm DNA-binding domain BB936_09835 PF00589 Phage integrase family BB936_09855 PF00730 HhH-GPD superfamily base excision DNA repair protein BB936_09860 PF01966 HD domain BB936_09865 PF12833 Helix-turn-helix domain BB936_09870 PF05400 Flagellar protein FliT BB936_09875 PF02561 Flagellar protein FliS BB936_09880 PF02465 Flagellar hook-associated protein 2 N-terminus BB936_09880 PF07195 Flagellar hook-associated protein 2 C-terminus BB936_09880 PF07196 Flagellin hook IN motif BB936_09885 PF00700 Bacterial flagellin C-terminal helical region BB936_09885 PF08884 Flagellin D3 domain BB936_09885 PF00669 Bacterial flagellin N-terminal helical region BB936_09890 PF00669 Bacterial flagellin N-terminal helical region BB936_09890 PF00700 Bacterial flagellin C-terminal helical region BB936_09890 PF08884 Flagellin D3 domain BB936_09900 PF04542 Sigma-70 region 2 BB936_09900 PF04545 Sigma-70, region 4 BB936_09900 PF04539 Sigma-70 region 3 BB936_09905 PF02899 Phage integrase, N-terminal SAM-like domain BB936_09910 PF00291 Pyridoxal-phosphate dependent enzyme BB936_09940 PF00171 Aldehyde dehydrogenase family BB936_09940 PF18327 Proline utilization A proline dehydrogenase N-terminal domain BB936_09940 PF01619 Proline dehydrogenase BB936_09940 PF14850 DNA-binding domain of Proline dehydrogenase BB936_09945 PF00474 Sodium:solute symporter family BB936_09960 PF05638 Type VI secretion system effector, Hcp BB936_09970 PF03239 Iron permease FTR1 family BB936_09975 PF13473 Cupredoxin-like domain BB936_09975 PF09375 Imelysin BB936_09980 PF04261 Dyp-type peroxidase family BB936_09985 PF03358 NADPH-dependent FMN reductase BB936_09995 PF01344 Kelch motif BB936_10010 PF01613 Flavin reductase like domain BB936_10015 PF00881 Nitroreductase family BB936_10020 PF12697 Alpha/beta hydrolase family BB936_10025 PF01042 Endoribonuclease L-PSP BB936_10030 PF00857 Isochorismatase family BB936_10040 PF00440 Bacterial regulatory proteins, tetR family BB936_10040 PF08362 YcdC-like protein, C-terminal region BB936_10045 PF00324 Amino acid permease BB936_10055 PF00589 Phage integrase family BB936_10060 PF01527 Transposase BB936_10085 PF00128 Alpha amylase, catalytic domain BB936_10085 PF02806 Alpha amylase, C-terminal all-beta domain BB936_10095 PF06942 GlpM protein BB936_10100 PF10769 Protein of unknown function (DUF2594) BB936_10105 PF00196 Bacterial regulatory proteins, luxR family BB936_10105 PF00072 Response regulator receiver domain BB936_10110 PF02151 UvrB/uvrC motif BB936_10110 PF08459 UvrC Helix-hairpin-helix N-terminal BB936_10110 PF01541 GIY-YIG catalytic domain BB936_10115 PF01066 CDP-alcohol phosphatidyltransferase BB936_10135 PF04606 Ogr/Delta-like zinc finger BB936_10170 PF17482 Phage tail sheath C-terminal domain BB936_10170 PF04984 Phage tail sheath protein subtilisin-like domain BB936_10285 PF05840 Bacteriophage replication gene A protein (GPA) BB936_10295 PF02086 D12 class N6 adenine-specific DNA methyltransferase BB936_10300 PF00929 Exonuclease BB936_10350 PF00589 Phage integrase family BB936_10350 PF02899 Phage integrase, N-terminal SAM-like domain BB936_10355 PF04606 Ogr/Delta-like zinc finger BB936_10430 PF03466 LysR substrate binding domain BB936_10430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BB936_10445 PF00132 Bacterial transferase hexapeptide (six repeats) BB936_10455 PF06530 Phage antitermination protein Q BB936_10460 PF10753 Toxin GhoT_OrtT BB936_10470 PF00959 Phage lysozyme BB936_10475 PF00561 alpha/beta hydrolase fold BB936_10480 PF04391 Protein of unknown function (DUF533) BB936_10485 PF03466 LysR substrate binding domain BB936_10485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BB936_10490 PF00144 Beta-lactamase BB936_10495 PF01926 50S ribosome-binding GTPase BB936_10495 PF06071 Protein of unknown function (DUF933) BB936_10505 PF01195 Peptidyl-tRNA hydrolase BB936_10510 PF10762 Protein of unknown function (DUF2583) BB936_10520 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BB936_10520 PF14572 Phosphoribosyl synthetase-associated domain BB936_10525 PF08544 GHMP kinases C terminal BB936_10525 PF00288 GHMP kinases N terminal domain BB936_10530 PF03550 Outer membrane lipoprotein LolB BB936_10535 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BB936_10535 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BB936_10535 PF01488 Shikimate / quinate 5-dehydrogenase BB936_10540 PF03462 PCRF domain BB936_10540 PF00472 RF-1 domain BB936_10545 PF17827 PrmC N-terminal domain BB936_10545 PF13847 Methyltransferase domain BB936_10550 PF04247 Invasion gene expression up-regulator, SirB BB936_10555 PF13369 Transglutaminase-like superfamily BB936_10560 PF00793 DAHP synthetase I family BB936_10565 PF00916 Sulfate permease family BB936_10565 PF01740 STAS domain BB936_10570 PF00990 Diguanylate cyclase, GGDEF domain BB936_10580 PF03009 Glycerophosphoryl diester phosphodiesterase family BB936_10595 PF02811 PHP domain BB936_10600 PF02613 Nitrate reductase delta subunit BB936_10605 PF07273 Protein of unknown function (DUF1439) BB936_10610 PF07690 Major Facilitator Superfamily BB936_10625 PF13302 Acetyltransferase (GNAT) domain BB936_10630 PF04337 Protein of unknown function, DUF480 BB936_10635 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BB936_10640 PF03023 Lipid II flippase MurJ BB936_10645 PF01699 Sodium/calcium exchanger protein BB936_10655 PF07690 Major Facilitator Superfamily BB936_10660 PF02371 Transposase IS116/IS110/IS902 family BB936_10660 PF01548 Transposase BB936_10665 PF00857 Isochorismatase family BB936_10670 PF00710 Asparaginase, N-terminal BB936_10670 PF17763 Glutaminase/Asparaginase C-terminal domain BB936_10675 PF01343 Peptidase family S49 BB936_10680 PF00881 Nitroreductase family BB936_10685 PF02769 AIR synthase related protein, C-terminal domain BB936_10685 PF00586 AIR synthase related protein, N-terminal domain BB936_10690 PF01131 DNA topoisomerase BB936_10690 PF01751 Toprim domain BB936_10695 PF07383 Protein of unknown function (DUF1496) BB936_10700 PF00293 NUDIX domain BB936_10705 PF03372 Endonuclease/Exonuclease/phosphatase family BB936_10710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BB936_10710 PF03466 LysR substrate binding domain BB936_10725 PF00551 Formyl transferase BB936_10725 PF01842 ACT domain BB936_10730 PF02810 SEC-C motif BB936_10740 PF01734 Patatin-like phospholipase BB936_10745 PF00072 Response regulator receiver domain BB936_10750 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BB936_10750 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BB936_10750 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BB936_10755 PF00816 H-NS histone family BB936_10765 PF00265 Thymidine kinase BB936_10770 PF00465 Iron-containing alcohol dehydrogenase BB936_10770 PF00171 Aldehyde dehydrogenase family BB936_10775 PF01914 MarC family integral membrane protein BB936_10780 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BB936_10785 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BB936_10790 PF00528 Binding-protein-dependent transport system inner membrane component BB936_10795 PF00528 Binding-protein-dependent transport system inner membrane component BB936_10795 PF12911 N-terminal TM domain of oligopeptide transport permease C BB936_10800 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BB936_10800 PF00005 ABC transporter BB936_10805 PF00005 ABC transporter BB936_10805 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BB936_10810 PF04269 Protein of unknown function, DUF440 BB936_10815 PF13396 Phospholipase_D-nuclease N-terminal BB936_10815 PF13091 PLD-like domain BB936_10830 PF03795 YCII-related domain BB936_10835 PF03544 Gram-negative bacterial TonB protein C-terminal BB936_10840 PF03061 Thioesterase superfamily BB936_10845 PF04279 Intracellular septation protein A BB936_10860 PF03692 Putative zinc- or iron-chelating domain BB936_10865 PF03922 OmpW family BB936_10875 PF00290 Tryptophan synthase alpha chain BB936_10880 PF00291 Pyridoxal-phosphate dependent enzyme BB936_10885 PF00218 Indole-3-glycerol phosphate synthase BB936_10885 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BB936_10890 PF02885 Glycosyl transferase family, helical bundle domain BB936_10890 PF00591 Glycosyl transferase family, a/b domain BB936_10895 PF00117 Glutamine amidotransferase class-I BB936_10900 PF00425 chorismate binding enzyme BB936_10900 PF04715 Anthranilate synthase component I, N terminal region BB936_10905 PF02811 PHP domain BB936_10910 PF01300 Telomere recombination BB936_10915 PF01479 S4 domain BB936_10915 PF00849 RNA pseudouridylate synthase BB936_10925 PF12557 Cob(I)alamin adenosyltransferase N terminal BB936_10925 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP BB936_10930 PF00106 short chain dehydrogenase BB936_10935 PF08496 Peptidase family S49 N-terminal BB936_10935 PF01343 Peptidase family S49 BB936_10940 PF10692 Protein of unknown function (DUF2498) BB936_10945 PF01131 DNA topoisomerase BB936_10945 PF01751 Toprim domain BB936_10945 PF01396 Topoisomerase DNA binding C4 zinc finger BB936_10945 PF08272 Topoisomerase I zinc-ribbon-like BB936_10950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BB936_10950 PF03466 LysR substrate binding domain BB936_10960 PF00330 Aconitase family (aconitate hydratase) BB936_10960 PF00694 Aconitase C-terminal domain BB936_10965 PF00925 GTP cyclohydrolase II BB936_10970 PF01569 PAP2 superfamily BB936_10975 PF06305 Lipopolysaccharide assembly protein A domain BB936_10980 PF18073 Rubredoxin metal binding domain BB936_10990 PF01381 Helix-turn-helix BB936_10990 PF07883 Cupin domain BB936_10995 PF03594 Benzoate membrane transport protein BB936_11000 PF07338 Protein of unknown function (DUF1471) BB936_11005 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BB936_11010 PF01253 Translation initiation factor SUI1 BB936_11015 PF02371 Transposase IS116/IS110/IS902 family BB936_11015 PF01548 Transposase BB936_11020 PF05433 Glycine zipper 2TM domain BB936_11025 PF00596 Class II Aldolase and Adducin N-terminal domain BB936_11035 PF00455 DeoR C terminal sensor domain BB936_11035 PF08220 DeoR-like helix-turn-helix domain BB936_11045 PF04328 Selenoprotein, putative BB936_11050 PF13722 5TM C-terminal transporter carbon starvation CstA BB936_11050 PF02554 Carbon starvation protein CstA BB936_11055 PF08206 Ribonuclease B OB domain BB936_11055 PF00773 RNB domain BB936_11055 PF00575 S1 RNA binding domain BB936_11060 PF00384 Molybdopterin oxidoreductase BB936_11065 PF12167 Arm DNA-binding domain BB936_11065 PF00589 Phage integrase family BB936_11075 PF05063 MT-A70 BB936_11195 PF01695 IstB-like ATP binding protein BB936_11240 PF00149 Calcineurin-like phosphoesterase BB936_11285 PF03245 Bacteriophage Rz lysis protein BB936_11310 PF10576 Iron-sulfur binding domain of endonuclease III BB936_11310 PF00730 HhH-GPD superfamily base excision DNA repair protein BB936_11310 PF00633 Helix-hairpin-helix motif BB936_11315 PF02508 Rnf-Nqr subunit, membrane protein BB936_11320 PF04205 FMN-binding domain BB936_11325 PF03116 NQR2, RnfD, RnfE family BB936_11330 PF12833 Helix-turn-helix domain BB936_11330 PF06445 GyrI-like small molecule binding domain BB936_11340 PF10531 SLBB domain BB936_11340 PF13375 RnfC Barrel sandwich hybrid domain BB936_11340 PF13237 4Fe-4S dicluster domain BB936_11340 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BB936_11345 PF04060 Putative Fe-S cluster BB936_11350 PF02508 Rnf-Nqr subunit, membrane protein BB936_11355 PF10754 Protein of unknown function (DUF2569) BB936_11370 PF02463 RecF/RecN/SMC N terminal domain BB936_11375 PF02371 Transposase IS116/IS110/IS902 family BB936_11375 PF01548 Transposase BB936_11380 PF02610 L-arabinose isomerase BB936_11380 PF11762 L-arabinose isomerase C-terminal domain BB936_11385 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BB936_11395 PF00005 ABC transporter BB936_11405 PF12833 Helix-turn-helix domain BB936_11405 PF02311 AraC-like ligand binding domain BB936_11410 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BB936_11410 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BB936_11415 PF13593 SBF-like CPA transporter family (DUF4137) BB936_11420 PF00962 Adenosine/AMP deaminase BB936_11425 PF00155 Aminotransferase class I and II BB936_11430 PF00367 phosphotransferase system, EIIB BB936_11430 PF02378 Phosphotransferase system, EIIC BB936_11435 PF00356 Bacterial regulatory proteins, lacI family BB936_11435 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BB936_11445 PF06097 Bacterial protein of unknown function (DUF945) BB936_11450 PF01238 Phosphomannose isomerase type I BB936_11455 PF00206 Lyase BB936_11455 PF10415 Fumarase C C-terminus BB936_11465 PF05472 DNA replication terminus site-binding protein (Ter protein) BB936_11480 PF07690 Major Facilitator Superfamily BB936_11490 PF00480 ROK family BB936_11505 PF00106 short chain dehydrogenase BB936_11520 PF07690 Major Facilitator Superfamily BB936_11540 PF01510 N-acetylmuramoyl-L-alanine amidase BB936_11550 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BB936_11550 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BB936_11550 PF00205 Thiamine pyrophosphate enzyme, central domain BB936_11555 PF01842 ACT domain BB936_11560 PF13419 Haloacid dehalogenase-like hydrolase BB936_11590 PF06445 GyrI-like small molecule binding domain BB936_11605 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BB936_11605 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BB936_11610 PF00027 Cyclic nucleotide-binding domain BB936_11610 PF13545 Crp-like helix-turn-helix domain BB936_11615 PF00582 Universal stress protein family BB936_11620 PF02233 NAD(P) transhydrogenase beta subunit BB936_11625 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch BB936_11625 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BB936_11625 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BB936_11635 PF07338 Protein of unknown function (DUF1471) BB936_11640 PF13520 Amino acid permease BB936_11650 PF00486 Transcriptional regulatory protein, C terminal BB936_11650 PF00072 Response regulator receiver domain BB936_11655 PF00512 His Kinase A (phospho-acceptor) domain BB936_11655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BB936_11655 PF00672 HAMP domain BB936_11660 PF02074 Carboxypeptidase Taq (M32) metallopeptidase BB936_11670 PF00089 Trypsin BB936_11685 PF00270 DEAD/DEAH box helicase BB936_11685 PF11898 Domain of unknown function (DUF3418) BB936_11685 PF04408 Helicase associated domain (HA2) BB936_11685 PF00271 Helicase conserved C-terminal domain BB936_11685 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold BB936_11690 PF02525 Flavodoxin-like fold BB936_11695 PF07027 Protein of unknown function (DUF1318) BB936_11700 PF13617 YnbE-like lipoprotein BB936_11705 PF11739 Dicarboxylate transport BB936_11710 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BB936_11710 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BB936_11715 PF03891 Domain of unknown function (DUF333) BB936_11720 PF02308 MgtC family BB936_11725 PF00893 Small Multidrug Resistance protein BB936_11735 PF00388 Phosphatidylinositol-specific phospholipase C, X domain BB936_11740 PF01171 PP-loop family BB936_11745 PF01544 CorA-like Mg2+ transporter protein BB936_11750 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BB936_11755 PF00246 Zinc carboxypeptidase BB936_11760 PF13378 Enolase C-terminal domain-like BB936_11760 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BB936_11765 PF08534 Redoxin BB936_11770 PF00158 Sigma-54 interaction domain BB936_11770 PF18024 Helix-turn-helix domain BB936_11785 PF05128 Domain of unknown function (DUF697) BB936_11790 PF04317 YcjX-like family, DUF463 BB936_11800 PF04024 PspC domain BB936_11805 PF06667 Phage shock protein B BB936_11810 PF04012 PspA/IM30 family BB936_11815 PF00158 Sigma-54 interaction domain BB936_11815 PF02954 Bacterial regulatory protein, Fis family BB936_11825 PF02917 Pertussis toxin, subunit 1 BB936_11830 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BB936_11835 PF00528 Binding-protein-dependent transport system inner membrane component BB936_11840 PF00528 Binding-protein-dependent transport system inner membrane component BB936_11840 PF12911 N-terminal TM domain of oligopeptide transport permease C BB936_11845 PF00005 ABC transporter BB936_11845 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BB936_11850 PF00005 ABC transporter BB936_11865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BB936_11865 PF03466 LysR substrate binding domain BB936_11870 PF00854 POT family BB936_11875 PF01548 Transposase BB936_11875 PF02371 Transposase IS116/IS110/IS902 family BB936_11885 PF04893 Yip1 domain BB936_11890 PF11656 YjbD family (DUF3811) BB936_11895 PF02798 Glutathione S-transferase, N-terminal domain BB936_11895 PF00043 Glutathione S-transferase, C-terminal domain BB936_11905 PF01479 S4 domain BB936_11905 PF00579 tRNA synthetases class I (W and Y) BB936_11910 PF01243 Pyridoxamine 5'-phosphate oxidase BB936_11910 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region BB936_11915 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme BB936_11920 PF03702 Anhydro-N-acetylmuramic acid kinase BB936_11925 PF05433 Glycine zipper 2TM domain BB936_11930 PF01047 MarR family BB936_11935 PF07869 Protein of unknown function (DUF1656) BB936_11940 PF00529 HlyD membrane-fusion protein of T1SS BB936_11940 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BB936_11945 PF04632 Fusaric acid resistance protein family BB936_11950 PF00248 Aldo/keto reductase family BB936_11955 PF06945 Protein of unknown function (DUF1289) BB936_11960 PF00884 Sulfatase BB936_11960 PF08019 Phosphoethanolamine transferase EptA/EptB BB936_11965 PF00440 Bacterial regulatory proteins, tetR family BB936_11965 PF16925 Tetracyclin repressor-like, C-terminal domain BB936_11970 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BB936_11975 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BB936_11985 PF00929 Exonuclease BB936_11990 PF00462 Glutaredoxin BB936_11995 PF00877 NlpC/P60 family BB936_12000 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BB936_12000 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BB936_12005 PF00356 Bacterial regulatory proteins, lacI family BB936_12010 PF03466 LysR substrate binding domain BB936_12010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BB936_12015 PF07690 Major Facilitator Superfamily BB936_12025 PF00677 Lumazine binding domain BB936_12045 PF00224 Pyruvate kinase, barrel domain BB936_12045 PF02887 Pyruvate kinase, alpha/beta domain BB936_12050 PF04728 Lipoprotein leucine-zipper BB936_12055 PF03734 L,D-transpeptidase catalytic domain BB936_12055 PF17969 L,D-transpeptidase C-terminal domain BB936_12055 PF01476 LysM domain BB936_12060 PF02657 Fe-S metabolism associated domain BB936_12065 PF00266 Aminotransferase class-V BB936_12070 PF01458 Uncharacterized protein family (UPF0051) BB936_12075 PF00005 ABC transporter BB936_12080 PF01458 Uncharacterized protein family (UPF0051) BB936_12085 PF01521 Iron-sulphur cluster biosynthesis BB936_12090 PF03061 Thioesterase superfamily BB936_12095 PF01548 Transposase BB936_12095 PF02371 Transposase IS116/IS110/IS902 family BB936_12100 PF01565 FAD binding domain BB936_12100 PF02913 FAD linked oxidases, C-terminal domain BB936_12100 PF13183 4Fe-4S dicluster domain BB936_12105 PF01594 AI-2E family transporter BB936_12115 PF00391 PEP-utilising enzyme, mobile domain BB936_12115 PF02896 PEP-utilising enzyme, TIM barrel domain BB936_12115 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BB936_12120 PF03618 Kinase/pyrophosphorylase BB936_12125 PF00793 DAHP synthetase I family BB936_12130 PF10636 Hemin uptake protein hemP BB936_12135 PF07715 TonB-dependent Receptor Plug Domain BB936_12135 PF00593 TonB dependent receptor BB936_12150 PF02696 Uncharacterized ACR, YdiU/UPF0061 family BB936_12160 PF00877 NlpC/P60 family BB936_12170 PF00892 EamA-like transporter family BB936_12175 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase BB936_12180 PF01522 Polysaccharide deacetylase BB936_12185 PF01370 NAD dependent epimerase/dehydratase family BB936_12185 PF02911 Formyl transferase, C-terminal domain BB936_12185 PF00551 Formyl transferase BB936_12190 PF00535 Glycosyl transferase family 2 BB936_12195 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BB936_12200 PF00005 ABC transporter BB936_12205 PF00255 Glutathione peroxidase BB936_12210 PF01032 FecCD transport family BB936_12220 PF13358 DDE superfamily endonuclease BB936_12220 PF13592 Winged helix-turn helix BB936_12225 PF00216 Bacterial DNA-binding protein BB936_12230 PF03483 B3/4 domain BB936_12230 PF03484 tRNA synthetase B5 domain BB936_12230 PF03147 Ferredoxin-fold anticodon binding domain BB936_12230 PF01588 Putative tRNA binding domain BB936_12230 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BB936_12235 PF01409 tRNA synthetases class II core domain (F) BB936_12235 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BB936_12240 PF00453 Ribosomal protein L20 BB936_12245 PF01632 Ribosomal protein L35 BB936_12250 PF00707 Translation initiation factor IF-3, C-terminal domain BB936_12250 PF05198 Translation initiation factor IF-3, N-terminal domain BB936_12255 PF02824 TGS domain BB936_12255 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BB936_12255 PF03129 Anticodon binding domain BB936_12255 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BB936_12260 PF13619 KTSC domain BB936_12265 PF04474 Protein of unknown function (DUF554) BB936_12290 PF01914 MarC family integral membrane protein BB936_12295 PF01464 Transglycosylase SLT domain BB936_12300 PF01297 Zinc-uptake complex component A periplasmic BB936_12305 PF00005 ABC transporter BB936_12310 PF00950 ABC 3 transport family BB936_12315 PF00950 ABC 3 transport family BB936_12335 PF00378 Enoyl-CoA hydratase/isomerase BB936_12340 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain BB936_12340 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain BB936_12345 PF03466 LysR substrate binding domain BB936_12345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BB936_12350 PF14002 YniB-like protein BB936_12355 PF13419 Haloacid dehalogenase-like hydrolase BB936_12360 PF00872 Transposase, Mutator family BB936_12365 PF07883 Cupin domain BB936_12370 PF04962 KduI/IolB family BB936_12380 PF06917 Periplasmic pectate lyase BB936_12385 PF00528 Binding-protein-dependent transport system inner membrane component BB936_12390 PF00528 Binding-protein-dependent transport system inner membrane component BB936_12395 PF17912 MalK OB fold domain BB936_12395 PF00005 ABC transporter BB936_12395 PF03459 TOBE domain BB936_12400 PF01547 Bacterial extracellular solute-binding protein BB936_12405 PF06178 Oligogalacturonate-specific porin protein (KdgM) BB936_12415 PF04307 LexA-binding, inner membrane-associated putative hydrolase BB936_12425 PF01510 N-acetylmuramoyl-L-alanine amidase BB936_12430 PF09339 IclR helix-turn-helix domain BB936_12430 PF01614 Bacterial transcriptional regulator BB936_12435 PF14583 Oligogalacturonate lyase BB936_12450 PF01435 Peptidase family M48 BB936_12455 PF17804 Tail specific protease N-terminal domain BB936_12455 PF03572 Peptidase family S41 BB936_12455 PF00595 PDZ domain BB936_12455 PF11818 C-terminal domain of tail specific protease (DUF3340) BB936_12460 PF17516 ProQ C-terminal domain BB936_12460 PF04352 ProQ/FINO family BB936_12465 PF13185 GAF domain BB936_12470 PF04403 Paraquat-inducible protein A BB936_12475 PF02470 MlaD protein BB936_12480 PF03466 LysR substrate binding domain BB936_12480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BB936_12485 PF07690 Major Facilitator Superfamily BB936_12515 PF07351 Protein of unknown function (DUF1480) BB936_12535 PF02798 Glutathione S-transferase, N-terminal domain BB936_12535 PF14834 Glutathione S-transferase, C-terminal domain BB936_12540 PF00924 Mechanosensitive ion channel BB936_12565 PF03692 Putative zinc- or iron-chelating domain BB936_12570 PF01557 Fumarylacetoacetate (FAA) hydrolase family BB936_12575 PF13406 Transglycosylase SLT domain BB936_12580 PF05166 YcgL domain BB936_12590 PF03775 Septum formation inhibitor MinC, C-terminal domain BB936_12590 PF05209 Septum formation inhibitor MinC, N-terminal domain BB936_12595 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BB936_12600 PF03776 Septum formation topological specificity factor MinE BB936_12605 PF00570 HRDC domain BB936_12605 PF01612 3'-5' exonuclease BB936_12610 PF13193 AMP-binding enzyme C-terminal domain BB936_12610 PF00501 AMP-binding enzyme BB936_12620 PF00814 Glycoprotease family BB936_12625 PF13307 Helicase C-terminal domain BB936_12625 PF04851 Type III restriction enzyme, res subunit BB936_12630 PF01042 Endoribonuclease L-PSP BB936_12635 PF00893 Small Multidrug Resistance protein BB936_12640 PF00893 Small Multidrug Resistance protein BB936_12645 PF01081 KDPG and KHG aldolase BB936_12650 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BB936_12650 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BB936_12655 PF01380 SIS domain BB936_12655 PF01418 Helix-turn-helix domain, rpiR family BB936_12660 PF00224 Pyruvate kinase, barrel domain BB936_12660 PF02887 Pyruvate kinase, alpha/beta domain BB936_12675 PF03279 Bacterial lipid A biosynthesis acyltransferase BB936_12680 PF01476 LysM domain BB936_12680 PF08525 Opacity-associated protein A N-terminal motif BB936_12680 PF01551 Peptidase family M23 BB936_12685 PF01297 Zinc-uptake complex component A periplasmic BB936_12690 PF00005 ABC transporter BB936_12695 PF00950 ABC 3 transport family BB936_12700 PF00854 POT family BB936_12705 PF17864 RuvB AAA lid domain BB936_12705 PF05496 Holliday junction DNA helicase RuvB P-loop domain BB936_12705 PF05491 RuvB C-terminal winged helix domain BB936_12710 PF01330 RuvA N terminal domain BB936_12710 PF07499 RuvA, C-terminal domain BB936_12715 PF02075 Crossover junction endodeoxyribonuclease RuvC BB936_12720 PF01709 Transcriptional regulator BB936_12725 PF00293 NUDIX domain BB936_12730 PF00152 tRNA synthetases class II (D, K and N) BB936_12730 PF02938 GAD domain BB936_12730 PF01336 OB-fold nucleic acid binding domain BB936_12735 PF00857 Isochorismatase family BB936_12740 PF01904 Protein of unknown function DUF72 BB936_12745 PF01124 MAPEG family BB936_12750 PF13649 Methyltransferase domain BB936_12755 PF08003 Protein of unknown function (DUF1698) BB936_12760 PF01548 Transposase BB936_12760 PF02371 Transposase IS116/IS110/IS902 family BB936_12765 PF02371 Transposase IS116/IS110/IS902 family BB936_12765 PF01548 Transposase BB936_12775 PF03616 Sodium/glutamate symporter BB936_12780 PF01479 S4 domain BB936_12780 PF00849 RNA pseudouridylate synthase BB936_12790 PF01548 Transposase BB936_12790 PF02371 Transposase IS116/IS110/IS902 family BB936_12800 PF00455 DeoR C terminal sensor domain BB936_12800 PF08220 DeoR-like helix-turn-helix domain BB936_12805 PF08013 Tagatose 6 phosphate kinase BB936_12810 PF03830 PTS system sorbose subfamily IIB component BB936_12820 PF03613 PTS system mannose/fructose/sorbose family IID component BB936_12825 PF03610 PTS system fructose IIA component BB936_12835 PF01116 Fructose-bisphosphate aldolase class-II BB936_12840 PF01551 Peptidase family M23 BB936_12840 PF01476 LysM domain BB936_12870 PF01979 Amidohydrolase family BB936_12875 PF07702 UTRA domain BB936_12875 PF00392 Bacterial regulatory proteins, gntR family BB936_12880 PF01979 Amidohydrolase family BB936_12895 PF13333 Integrase core domain BB936_12895 PF13276 HTH-like domain BB936_12895 PF00665 Integrase core domain BB936_12900 PF00267 Gram-negative porin BB936_12905 PF01548 Transposase BB936_12905 PF02371 Transposase IS116/IS110/IS902 family BB936_12910 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family BB936_12915 PF04996 Succinylarginine dihydrolase BB936_12920 PF00171 Aldehyde dehydrogenase family BB936_12925 PF04958 Arginine N-succinyltransferase beta subunit BB936_12930 PF00202 Aminotransferase class-III BB936_12935 PF00392 Bacterial regulatory proteins, gntR family BB936_12935 PF00155 Aminotransferase class I and II BB936_12940 PF01654 Cytochrome bd terminal oxidase subunit I BB936_12945 PF02322 Cytochrome bd terminal oxidase subunit II BB936_12950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BB936_12950 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term BB936_12950 PF07730 Histidine kinase BB936_12950 PF00672 HAMP domain BB936_12960 PF01548 Transposase BB936_12960 PF02371 Transposase IS116/IS110/IS902 family BB936_12970 PF01641 SelR domain BB936_12975 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BB936_12975 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BB936_12980 PF01263 Aldose 1-epimerase BB936_12985 PF06629 MltA-interacting protein MipA BB936_12990 PF06798 PrkA serine protein kinase C-terminal domain BB936_12990 PF08298 PrkA AAA domain BB936_12995 PF04285 Protein of unknown function (DUF444) BB936_13010 PF03466 LysR substrate binding domain BB936_13010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BB936_13015 PF02678 Pirin BB936_13015 PF05726 Pirin C-terminal cupin domain BB936_13020 PF00990 Diguanylate cyclase, GGDEF domain BB936_13020 PF00563 EAL domain BB936_13020 PF13426 PAS domain BB936_13030 PF01168 Alanine racemase, N-terminal domain BB936_13030 PF00842 Alanine racemase, C-terminal domain BB936_13035 PF01266 FAD dependent oxidoreductase BB936_13040 PF04293 SpoVR like protein BB936_13045 PF07840 FadR C-terminal domain BB936_13045 PF00392 Bacterial regulatory proteins, gntR family BB936_13050 PF06450 Bacterial Na+/H+ antiporter B (NhaB) BB936_13055 PF02600 Disulfide bond formation protein DsbB BB936_13075 PF03932 CutC family BB936_13080 PF06185 YecM protein BB936_13085 PF05746 DALR anticodon binding domain BB936_13085 PF00750 tRNA synthetases class I (R) BB936_13085 PF03485 Arginyl tRNA synthetase N terminal domain BB936_13095 PF02562 PhoH-like protein BB936_13110 PF13994 PgaD-like protein BB936_13115 PF00535 Glycosyl transferase family 2 BB936_13130 PF00557 Metallopeptidase family M24 BB936_13140 PF01411 tRNA synthetases class II (A) BB936_13140 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BB936_13140 PF02272 DHHA1 domain BB936_13150 PF09313 Domain of unknown function (DUF1971) BB936_13150 PF03848 Tellurite resistance protein TehB BB936_13160 PF00578 AhpC/TSA family BB936_13165 PF12704 MacB-like periplasmic core domain BB936_13165 PF02687 FtsX-like permease family BB936_13165 PF00005 ABC transporter BB936_13175 PF12704 MacB-like periplasmic core domain BB936_13175 PF02687 FtsX-like permease family BB936_13175 PF00005 ABC transporter BB936_13185 PF10634 Fe2+ transport protein BB936_13190 PF03239 Iron permease FTR1 family BB936_13205 PF04960 Glutaminase BB936_13210 PF01261 Xylose isomerase-like TIM barrel BB936_13215 PF00596 Class II Aldolase and Adducin N-terminal domain BB936_13220 PF17042 Nucleotide-binding C-terminal domain BB936_13220 PF07005 Sugar-binding N-terminal domain BB936_13225 PF08220 DeoR-like helix-turn-helix domain BB936_13225 PF00455 DeoR C terminal sensor domain BB936_13230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BB936_13230 PF00989 PAS fold BB936_13230 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BB936_13230 PF17203 Single cache domain 3 BB936_13235 PF00072 Response regulator receiver domain BB936_13240 PF03390 2-hydroxycarboxylate transporter family BB936_13245 PF00324 Amino acid permease BB936_13260 PF07690 Major Facilitator Superfamily BB936_13275 PF00872 Transposase, Mutator family BB936_13280 PF08242 Methyltransferase domain BB936_13290 PF00872 Transposase, Mutator family BB936_13335 PF00589 Phage integrase family BB936_13335 PF02899 Phage integrase, N-terminal SAM-like domain BB936_13340 PF10709 Protein of unknown function (DUF2511) BB936_13345 PF05425 Copper resistance protein D BB936_13350 PF04234 CopC domain BB936_13355 PF00210 Ferritin-like domain BB936_13360 PF06440 DNA polymerase III, theta subunit BB936_13365 PF00561 alpha/beta hydrolase fold BB936_13370 PF00929 Exonuclease BB936_13375 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain BB936_13375 PF00326 Prolyl oligopeptidase family BB936_13380 PF13995 YebF-like protein BB936_13390 PF07130 YebG protein BB936_13395 PF03880 DbpA RNA binding domain BB936_13395 PF00271 Helicase conserved C-terminal domain BB936_13395 PF00270 DEAD/DEAH box helicase BB936_13405 PF03701 Uncharacterised protein family (UPF0181) BB936_13410 PF04715 Anthranilate synthase component I, N terminal region BB936_13410 PF00425 chorismate binding enzyme BB936_13415 PF00293 NUDIX domain BB936_13420 PF03313 Serine dehydratase alpha chain BB936_13420 PF03315 Serine dehydratase beta chain BB936_13425 PF02371 Transposase IS116/IS110/IS902 family BB936_13425 PF01548 Transposase BB936_13430 PF03471 Transporter associated domain BB936_13430 PF03741 Integral membrane protein TerC family BB936_13435 PF03830 PTS system sorbose subfamily IIB component BB936_13435 PF03610 PTS system fructose IIA component BB936_13440 PF03609 PTS system sorbose-specific iic component BB936_13445 PF03613 PTS system mannose/fructose/sorbose family IID component BB936_13450 PF06173 Protein of unknown function (DUF986) BB936_13455 PF02659 Putative manganese efflux pump BB936_13460 PF07715 TonB-dependent Receptor Plug Domain BB936_13460 PF00593 TonB dependent receptor BB936_13465 PF00563 EAL domain BB936_13465 PF00990 Diguanylate cyclase, GGDEF domain BB936_13465 PF05231 MASE1 BB936_13465 PF08447 PAS fold BB936_13465 PF08448 PAS fold BB936_13465 PF13426 PAS domain BB936_13475 PF13847 Methyltransferase domain BB936_13480 PF00905 Penicillin binding protein transpeptidase domain BB936_13480 PF03717 Penicillin-binding Protein dimerisation domain BB936_13490 PF00313 'Cold-shock' DNA-binding domain BB936_13495 PF10736 Protein of unknown function (DUF2627) BB936_13500 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP BB936_13520 PF13974 YebO-like protein BB936_13525 PF13996 YobH-like protein BB936_13530 PF10964 Protein of unknown function (DUF2766) BB936_13535 PF12833 Helix-turn-helix domain BB936_13545 PF13520 Amino acid permease BB936_13555 PF00005 ABC transporter BB936_13555 PF00664 ABC transporter transmembrane region BB936_13565 PF03372 Endonuclease/Exonuclease/phosphatase family BB936_13575 PF00360 Phytochrome region BB936_13575 PF00990 Diguanylate cyclase, GGDEF domain BB936_13575 PF01590 GAF domain BB936_13575 PF00563 EAL domain BB936_13585 PF06411 HdeA/HdeB family BB936_13590 PF07007 Lysozyme inhibitor LprI BB936_13600 PF00892 EamA-like transporter family BB936_13615 PF01638 HxlR-like helix-turn-helix BB936_13620 PF05368 NmrA-like family BB936_13625 PF01053 Cys/Met metabolism PLP-dependent enzyme BB936_13635 PF00717 Peptidase S24-like BB936_13640 PF13438 Domain of unknown function (DUF4113) BB936_13640 PF00817 impB/mucB/samB family BB936_13640 PF11799 impB/mucB/samB family C-terminal domain BB936_13645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BB936_13645 PF08447 PAS fold BB936_13655 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BB936_13655 PF00356 Bacterial regulatory proteins, lacI family BB936_13660 PF08244 Glycosyl hydrolases family 32 C terminal BB936_13660 PF00251 Glycosyl hydrolases family 32 N-terminal domain BB936_13665 PF01306 LacY proton/sugar symporter BB936_13680 PF00180 Isocitrate/isopropylmalate dehydrogenase BB936_13715 PF00180 Isocitrate/isopropylmalate dehydrogenase BB936_13720 PF00849 RNA pseudouridylate synthase BB936_13725 PF00293 NUDIX domain BB936_13735 PF04356 Protein of unknown function (DUF489) BB936_13740 PF00206 Lyase BB936_13740 PF08328 Adenylosuccinate lyase C-terminal BB936_13750 PF00486 Transcriptional regulatory protein, C terminal BB936_13750 PF00072 Response regulator receiver domain BB936_13755 PF08918 PhoQ Sensor BB936_13755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BB936_13760 PF08007 Cupin superfamily protein BB936_13765 PF01546 Peptidase family M20/M25/M40 BB936_13765 PF07687 Peptidase dimerisation domain BB936_13770 PF02146 Sir2 family BB936_13780 PF02687 FtsX-like permease family BB936_13780 PF12704 MacB-like periplasmic core domain BB936_13785 PF00005 ABC transporter BB936_13790 PF02687 FtsX-like permease family BB936_13790 PF12704 MacB-like periplasmic core domain BB936_13795 PF00270 DEAD/DEAH box helicase BB936_13795 PF00271 Helicase conserved C-terminal domain BB936_13795 PF03461 TRCF domain BB936_13795 PF17757 UvrB interaction domain BB936_13795 PF02559 CarD-like/TRCF domain BB936_13800 PF05433 Glycine zipper 2TM domain BB936_13805 PF07992 Pyridine nucleotide-disulphide oxidoreductase BB936_13810 PF05728 Uncharacterised protein family (UPF0227) BB936_13815 PF00933 Glycosyl hydrolase family 3 N terminal domain BB936_13820 PF01636 Phosphotransferase enzyme family BB936_13825 PF08139 Prokaryotic membrane lipoprotein lipid attachment site BB936_13825 PF13036 Peptidoglycan-synthase activator LpoB BB936_13830 PF07233 Protein of unknown function (DUF1425) BB936_13835 PF01230 HIT domain BB936_13840 PF08501 Shikimate dehydrogenase substrate binding domain BB936_13845 PF12793 Sugar transport-related sRNA regulator N-term BB936_13845 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BB936_13850 PF13186 Iron-sulfur cluster-binding domain BB936_13850 PF04055 Radical SAM superfamily BB936_13860 PF00664 ABC transporter transmembrane region BB936_13860 PF00005 ABC transporter BB936_13860 PF03412 Peptidase C39 family BB936_13870 PF00367 phosphotransferase system, EIIB BB936_13870 PF02378 Phosphotransferase system, EIIC BB936_13875 PF01026 TatD related DNase BB936_13880 PF09115 DNA polymerase III, delta subunit, C terminal BB936_13885 PF02223 Thymidylate kinase BB936_13890 PF02618 YceG-like family BB936_13895 PF01063 Amino-transferase class IV BB936_13900 PF00109 Beta-ketoacyl synthase, N-terminal domain BB936_13900 PF02801 Beta-ketoacyl synthase, C-terminal domain BB936_13905 PF00550 Phosphopantetheine attachment site BB936_13915 PF00698 Acyl transferase domain BB936_13920 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BB936_13920 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BB936_13925 PF02504 Fatty acid synthesis protein BB936_13930 PF01783 Ribosomal L32p protein family BB936_13935 PF02620 Large ribosomal RNA subunit accumulation protein YceD BB936_13940 PF02545 Maf-like protein BB936_13945 PF00849 RNA pseudouridylate synthase BB936_13945 PF01479 S4 domain BB936_13950 PF10150 Ribonuclease E/G family BB936_13950 PF12111 Polyribonucleotide phosphorylase C terminal BB936_13950 PF00575 S1 RNA binding domain BB936_13955 PF03992 Antibiotic biosynthesis monooxygenase BB936_13960 PF01979 Amidohydrolase family BB936_13965 PF06183 DinI-like family BB936_13970 PF13991 BssS protein family BB936_13975 PF01266 FAD dependent oxidoreductase BB936_13980 PF00196 Bacterial regulatory proteins, luxR family BB936_13985 PF01594 AI-2E family transporter BB936_14000 PF03916 Polysulphide reductase, NrfD BB936_14005 PF13247 4Fe-4S dicluster domain BB936_14010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BB936_14010 PF00512 His Kinase A (phospho-acceptor) domain BB936_14015 PF00072 Response regulator receiver domain BB936_14015 PF00196 Bacterial regulatory proteins, luxR family BB936_14020 PF03279 Bacterial lipid A biosynthesis acyltransferase BB936_14025 PF18807 Tripartite Tc toxins repeat BB936_14025 PF05785 Rho-activating domain of cytotoxic necrotizing factor BB936_14030 PF07681 DoxX BB936_14040 PF07690 Major Facilitator Superfamily BB936_14045 PF00854 POT family BB936_14050 PF02371 Transposase IS116/IS110/IS902 family BB936_14050 PF01548 Transposase BB936_14055 PF00535 Glycosyl transferase family 2 BB936_14060 PF04349 Periplasmic glucan biosynthesis protein, MdoG BB936_14065 PF01757 Acyltransferase family BB936_14075 PF01548 Transposase BB936_14075 PF02371 Transposase IS116/IS110/IS902 family BB936_14080 PF03471 Transporter associated domain BB936_14080 PF00999 Sodium/hydrogen exchanger family BB936_14080 PF02080 TrkA-C domain BB936_14090 PF00765 Autoinducer synthase BB936_14095 PF03472 Autoinducer binding domain BB936_14095 PF00196 Bacterial regulatory proteins, luxR family BB936_14110 PF08534 Redoxin BB936_14120 PF03916 Polysulphide reductase, NrfD BB936_14125 PF00037 4Fe-4S binding domain BB936_14125 PF13247 4Fe-4S dicluster domain BB936_14130 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) BB936_14130 PF13435 Cytochrome c554 and c-prime BB936_14135 PF02335 Cytochrome c552 BB936_14145 PF04358 DsrC like protein BB936_14150 PF00708 Acylphosphatase BB936_14165 PF17785 PUA-like domain BB936_14165 PF10672 S-adenosylmethionine-dependent methyltransferase BB936_14170 PF08755 Hemimethylated DNA-binding protein YccV like BB936_14175 PF13380 CoA binding domain BB936_14180 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) BB936_14185 PF02142 MGS-like domain BB936_14190 PF12462 DNA helicase IV / RNA helicase N terminal BB936_14190 PF13361 UvrD-like helicase C-terminal domain BB936_14190 PF00580 UvrD/REP helicase N-terminal domain BB936_14195 PF03733 Inner membrane component domain BB936_14200 PF12805 FUSC-like inner membrane protein yccS BB936_14205 PF04994 TfoX C-terminal domain BB936_14205 PF04993 TfoX N-terminal domain BB936_14210 PF03846 Cell division inhibitor SulA BB936_14215 PF00691 OmpA family BB936_14215 PF01389 OmpA-like transmembrane domain BB936_14220 PF17414 MatP C-terminal ribbon-helix-helix domain BB936_14220 PF06303 MatP N-terminal domain BB936_14225 PF13654 AAA domain BB936_14225 PF05362 Lon protease (S16) C-terminal proteolytic domain BB936_14230 PF07977 FabA-like domain BB936_14240 PF02801 Beta-ketoacyl synthase, C-terminal domain BB936_14240 PF00109 Beta-ketoacyl synthase, N-terminal domain BB936_14245 PF03886 ABC-type transport auxiliary lipoprotein component BB936_14250 PF02470 MlaD protein BB936_14255 PF04403 Paraquat-inducible protein A BB936_14260 PF12848 ABC transporter BB936_14260 PF00005 ABC transporter BB936_14260 PF16326 ABC transporter C-terminal domain BB936_14265 PF01170 Putative RNA methylase family UPF0020 BB936_14265 PF02926 THUMP domain BB936_14265 PF10672 S-adenosylmethionine-dependent methyltransferase BB936_14270 PF03476 MOSC N-terminal beta barrel domain BB936_14270 PF03473 MOSC domain BB936_14270 PF00111 2Fe-2S iron-sulfur cluster binding domain BB936_14275 PF07126 Cell-division protein ZapC BB936_14280 PF01180 Dihydroorotate dehydrogenase BB936_14285 PF01433 Peptidase family M1 domain BB936_14285 PF17432 Domain of unknown function (DUF3458_C) ARM repeats BB936_14285 PF11940 Domain of unknown function (DUF3458) Ig-like fold BB936_14290 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BB936_14290 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BB936_14295 PF00152 tRNA synthetases class II (D, K and N) BB936_14295 PF01336 OB-fold nucleic acid binding domain BB936_14300 PF00267 Gram-negative porin BB936_14305 PF00155 Aminotransferase class I and II BB936_14310 PF12792 CSS motif domain associated with EAL BB936_14310 PF00563 EAL domain BB936_14315 PF00753 Metallo-beta-lactamase superfamily BB936_14320 PF05951 Bacterial protein of unknown function (DUF882) BB936_14325 PF01471 Putative peptidoglycan binding domain BB936_14325 PF03734 L,D-transpeptidase catalytic domain BB936_14330 PF16330 MukB hinge domain BB936_14330 PF04310 MukB N-terminal BB936_14335 PF04288 MukE-like family BB936_14340 PF17192 MukF middle domain BB936_14340 PF17193 MukF C-terminal domain BB936_14340 PF03882 MukF winged-helix domain BB936_14350 PF02698 DUF218 domain BB936_14355 PF01636 Phosphotransferase enzyme family BB936_14360 PF02348 Cytidylyltransferase BB936_14365 PF03966 Trm112p-like protein BB936_14370 PF00313 'Cold-shock' DNA-binding domain BB936_14375 PF00313 'Cold-shock' DNA-binding domain BB936_14380 PF07063 Domain of unknown function (DUF1338) BB936_14385 PF02606 Tetraacyldisaccharide-1-P 4'-kinase BB936_14390 PF00664 ABC transporter transmembrane region BB936_14390 PF00005 ABC transporter BB936_14395 PF00753 Metallo-beta-lactamase superfamily BB936_14395 PF03772 Competence protein BB936_14400 PF00216 Bacterial DNA-binding protein BB936_14405 PF00575 S1 RNA binding domain BB936_14410 PF02224 Cytidylate kinase BB936_14415 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BB936_14420 PF00266 Aminotransferase class-V BB936_14425 PF04239 Protein of unknown function (DUF421) BB936_14430 PF17763 Glutaminase/Asparaginase C-terminal domain BB936_14430 PF00710 Asparaginase, N-terminal BB936_14435 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding BB936_14435 PF18381 YcaO cyclodehydratase C-terminal domain BB936_14440 PF01226 Formate/nitrite transporter BB936_14445 PF01228 Glycine radical BB936_14445 PF02901 Pyruvate formate lyase-like BB936_14450 PF04055 Radical SAM superfamily BB936_14455 PF07690 Major Facilitator Superfamily BB936_14460 PF00872 Transposase, Mutator family BB936_14470 PF02371 Transposase IS116/IS110/IS902 family BB936_14470 PF01548 Transposase BB936_14475 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BB936_14475 PF02403 Seryl-tRNA synthetase N-terminal domain BB936_14480 PF12002 MgsA AAA+ ATPase C terminal BB936_14480 PF00004 ATPase family associated with various cellular activities (AAA) BB936_14480 PF16193 AAA C-terminal domain BB936_14485 PF03548 Outer membrane lipoprotein carrier protein LolA BB936_14490 PF09397 Ftsk gamma domain BB936_14490 PF13491 4TM region of DNA translocase FtsK/SpoIIIE BB936_14490 PF01580 FtsK/SpoIIIE family BB936_14490 PF17854 FtsK alpha domain BB936_14495 PF01037 Lrp/AsnC ligand binding domain BB936_14500 PF07992 Pyridine nucleotide-disulphide oxidoreductase BB936_14505 PF00664 ABC transporter transmembrane region BB936_14505 PF00005 ABC transporter BB936_14510 PF00005 ABC transporter BB936_14510 PF00664 ABC transporter transmembrane region BB936_14515 PF03588 Leucyl/phenylalanyl-tRNA protein transferase BB936_14520 PF01176 Translation initiation factor 1A / IF-1 BB936_14525 PF00004 ATPase family associated with various cellular activities (AAA) BB936_14525 PF10431 C-terminal, D2-small domain, of ClpB protein BB936_14525 PF02861 Clp amino terminal domain, pathogenicity island component BB936_14525 PF07724 AAA domain (Cdc48 subfamily) BB936_14525 PF17871 AAA lid domain BB936_14530 PF02617 ATP-dependent Clp protease adaptor protein ClpS BB936_14535 PF00313 'Cold-shock' DNA-binding domain BB936_14540 PF02687 FtsX-like permease family BB936_14540 PF12704 MacB-like periplasmic core domain BB936_14540 PF00005 ABC transporter BB936_14545 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BB936_14550 PF04393 Protein of unknown function (DUF535) BB936_14555 PF11398 Protein of unknown function (DUF2813) BB936_14560 PF03956 Lysine exporter LysO BB936_14565 PF03063 Prismane/CO dehydrogenase family BB936_14570 PF00175 Oxidoreductase NAD-binding domain BB936_14570 PF00111 2Fe-2S iron-sulfur cluster binding domain BB936_14570 PF00970 Oxidoreductase FAD-binding domain BB936_14575 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BB936_14575 PF00205 Thiamine pyrophosphate enzyme, central domain BB936_14575 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BB936_14580 PF04072 Leucine carboxyl methyltransferase BB936_14585 PF01212 Beta-eliminating lyase BB936_14590 PF13460 NAD(P)H-binding BB936_14590 PF11066 Protein of unknown function (DUF2867) BB936_14595 PF01370 NAD dependent epimerase/dehydratase family BB936_14600 PF12883 Protein of unknown function (DUF3828) BB936_14605 PF00005 ABC transporter BB936_14610 PF00497 Bacterial extracellular solute-binding proteins, family 3 BB936_14615 PF00528 Binding-protein-dependent transport system inner membrane component BB936_14620 PF00528 Binding-protein-dependent transport system inner membrane component BB936_14625 PF00497 Bacterial extracellular solute-binding proteins, family 3 BB936_14630 PF05958 tRNA (Uracil-5-)-methyltransferase BB936_14635 PF10767 Protein of unknown function (DUF2593) BB936_14640 PF00528 Binding-protein-dependent transport system inner membrane component BB936_14645 PF00528 Binding-protein-dependent transport system inner membrane component BB936_14650 PF00005 ABC transporter BB936_14650 PF08402 TOBE domain BB936_14655 PF13416 Bacterial extracellular solute-binding protein BB936_14660 PF10722 Putative bacterial sensory transduction regulator BB936_14665 PF07214 Protein of unknown function (DUF1418) BB936_14670 PF00462 Glutaredoxin BB936_14675 PF02080 TrkA-C domain BB936_14675 PF06826 Predicted Permease Membrane Region BB936_14685 PF01569 PAP2 superfamily BB936_14690 PF01791 DeoC/LacD family aldolase BB936_14695 PF00455 DeoR C terminal sensor domain BB936_14695 PF08220 DeoR-like helix-turn-helix domain BB936_14705 PF03315 Serine dehydratase beta chain BB936_14705 PF03313 Serine dehydratase alpha chain BB936_14710 PF07943 Penicillin-binding protein 5, C-terminal domain BB936_14710 PF00768 D-alanyl-D-alanine carboxypeptidase BB936_14715 PF00291 Pyridoxal-phosphate dependent enzyme BB936_14715 PF00571 CBS domain BB936_14720 PF01053 Cys/Met metabolism PLP-dependent enzyme BB936_14725 PF00528 Binding-protein-dependent transport system inner membrane component BB936_14730 PF00005 ABC transporter BB936_14730 PF09383 NIL domain BB936_14735 PF03180 NLPA lipoprotein BB936_14750 PF13417 Glutathione S-transferase, N-terminal domain BB936_14750 PF00043 Glutathione S-transferase, C-terminal domain BB936_14755 PF07715 TonB-dependent Receptor Plug Domain BB936_14755 PF00593 TonB dependent receptor BB936_14760 PF00005 ABC transporter BB936_14765 PF01032 FecCD transport family BB936_14770 PF00324 Amino acid permease BB936_14775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BB936_14775 PF03466 LysR substrate binding domain BB936_14790 PF03601 Conserved hypothetical protein 698 BB936_14795 PF01261 Xylose isomerase-like TIM barrel BB936_14800 PF13954 PapC N-terminal domain BB936_14800 PF13953 PapC C-terminal domain BB936_14800 PF00577 Outer membrane usher protein BB936_14805 PF02753 Pili assembly chaperone PapD, C-terminal domain BB936_14805 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BB936_14815 PF17550 Family of unknown function BB936_14820 PF00486 Transcriptional regulatory protein, C terminal BB936_14825 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BB936_14825 PF02378 Phosphotransferase system, EIIC BB936_14830 PF00294 pfkB family carbohydrate kinase BB936_14835 PF00381 PTS HPr component phosphorylation site BB936_14835 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BB936_14840 PF00293 NUDIX domain BB936_14840 PF13344 Haloacid dehalogenase-like hydrolase BB936_14845 PF03264 NapC/NirT cytochrome c family, N-terminal region BB936_14850 PF18364 Molybdopterin oxidoreductase N-terminal domain BB936_14850 PF00384 Molybdopterin oxidoreductase BB936_14850 PF01568 Molydopterin dinucleotide binding domain BB936_14855 PF03692 Putative zinc- or iron-chelating domain BB936_14860 PF03222 Tryptophan/tyrosine permease family BB936_14865 PF09285 Elongation factor P, C-terminal BB936_14865 PF01132 Elongation factor P (EF-P) OB domain BB936_14865 PF08207 Elongation factor P (EF-P) KOW-like domain BB936_14870 PF03786 D-mannonate dehydratase (UxuA) BB936_14880 PF01232 Mannitol dehydrogenase Rossmann domain BB936_14880 PF08125 Mannitol dehydrogenase C-terminal domain BB936_14885 PF07729 FCD domain BB936_14885 PF00392 Bacterial regulatory proteins, gntR family BB936_14895 PF02492 CobW/HypB/UreG, nucleotide-binding domain BB936_14895 PF07683 Cobalamin synthesis protein cobW C-terminal domain BB936_14900 PF01569 PAP2 superfamily BB936_14905 PF00877 NlpC/P60 family BB936_14915 PF12792 CSS motif domain associated with EAL BB936_14915 PF00563 EAL domain BB936_14920 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BB936_14925 PF00528 Binding-protein-dependent transport system inner membrane component BB936_14930 PF00528 Binding-protein-dependent transport system inner membrane component BB936_14930 PF12911 N-terminal TM domain of oligopeptide transport permease C BB936_14935 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BB936_14935 PF00005 ABC transporter BB936_14940 PF13989 YejG-like protein BB936_14945 PF07690 Major Facilitator Superfamily BB936_14950 PF01479 S4 domain BB936_14950 PF00849 RNA pseudouridylate synthase BB936_14955 PF00271 Helicase conserved C-terminal domain BB936_14955 PF04851 Type III restriction enzyme, res subunit BB936_14960 PF01386 Ribosomal L25p family BB936_14965 PF04245 37-kD nucleoid-associated bacterial protein BB936_14970 PF07208 Protein of unknown function (DUF1414) BB936_14975 PF00884 Sulfatase BB936_14975 PF11893 Domain of unknown function (DUF3413) BB936_14995 PF00872 Transposase, Mutator family BB936_15005 PF01527 Transposase BB936_15025 PF00194 Eukaryotic-type carbonic anhydrase BB936_15030 PF00232 Glycosyl hydrolase family 1 BB936_15035 PF02378 Phosphotransferase system, EIIC BB936_15035 PF00367 phosphotransferase system, EIIB BB936_15035 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BB936_15040 PF01418 Helix-turn-helix domain, rpiR family BB936_15040 PF01380 SIS domain BB936_15060 PF06530 Phage antitermination protein Q BB936_15070 PF06183 DinI-like family BB936_15075 PF01278 Omptin family BB936_15080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BB936_15080 PF00672 HAMP domain BB936_15080 PF02743 Cache domain BB936_15085 PF12706 Beta-lactamase superfamily domain BB936_15095 PF00144 Beta-lactamase BB936_15110 PF00267 Gram-negative porin BB936_15125 PF07690 Major Facilitator Superfamily BB936_15130 PF01627 Hpt domain BB936_15130 PF16359 RcsD-ABL domain BB936_15130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BB936_15135 PF00196 Bacterial regulatory proteins, luxR family BB936_15135 PF00072 Response regulator receiver domain BB936_15140 PF00512 His Kinase A (phospho-acceptor) domain BB936_15140 PF09456 RcsC Alpha-Beta-Loop (ABL) BB936_15140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BB936_15140 PF00072 Response regulator receiver domain BB936_15145 PF03989 DNA gyrase C-terminal domain, beta-propeller BB936_15145 PF00521 DNA gyrase/topoisomerase IV, subunit A BB936_15155 PF03477 ATP cone domain BB936_15155 PF02867 Ribonucleotide reductase, barrel domain BB936_15155 PF00317 Ribonucleotide reductase, all-alpha domain BB936_15160 PF00268 Ribonucleotide reductase, small chain BB936_15170 PF03974 Ecotin BB936_15185 PF00994 Probable molybdopterin binding domain BB936_15190 PF03222 Tryptophan/tyrosine permease family BB936_15195 PF07437 YfaZ precursor BB936_15200 PF06628 Catalase-related immune-responsive BB936_15200 PF00199 Catalase BB936_15205 PF13193 AMP-binding enzyme C-terminal domain BB936_15205 PF00501 AMP-binding enzyme BB936_15210 PF13378 Enolase C-terminal domain-like BB936_15215 PF00378 Enoyl-CoA hydratase/isomerase BB936_15220 PF12697 Alpha/beta hydrolase family BB936_15225 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BB936_15225 PF16582 Middle domain of thiamine pyrophosphate BB936_15225 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BB936_15230 PF00425 chorismate binding enzyme BB936_15235 PF05957 Bacterial protein of unknown function (DUF883) BB936_15240 PF00920 Dehydratase family BB936_15245 PF03928 Haem-degrading BB936_15250 PF07690 Major Facilitator Superfamily BB936_15255 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BB936_15255 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BB936_15260 PF00356 Bacterial regulatory proteins, lacI family BB936_15265 PF00106 short chain dehydrogenase BB936_15270 PF01202 Shikimate kinase BB936_15280 PF06496 Protein of unknown function (DUF1097) BB936_15290 PF00361 Proton-conducting membrane transporter BB936_15295 PF00361 Proton-conducting membrane transporter BB936_15300 PF00361 Proton-conducting membrane transporter BB936_15300 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BB936_15305 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BB936_15310 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 BB936_15315 PF12838 4Fe-4S dicluster domain BB936_15320 PF00146 NADH dehydrogenase BB936_15325 PF01568 Molydopterin dinucleotide binding domain BB936_15325 PF00384 Molybdopterin oxidoreductase BB936_15325 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BB936_15325 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BB936_15330 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BB936_15330 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BB936_15330 PF10531 SLBB domain BB936_15340 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit BB936_15340 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BB936_15345 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BB936_15350 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 BB936_15355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BB936_15355 PF03466 LysR substrate binding domain BB936_15360 PF00155 Aminotransferase class I and II BB936_15370 PF03600 Citrate transporter BB936_15370 PF02080 TrkA-C domain BB936_15380 PF13419 Haloacid dehalogenase-like hydrolase BB936_15385 PF03887 YfbU domain BB936_15390 PF04217 Protein of unknown function, DUF412 BB936_15395 PF00871 Acetokinase family BB936_15400 PF07085 DRTGG domain BB936_15400 PF01515 Phosphate acetyl/butaryl transferase BB936_15405 PF00356 Bacterial regulatory proteins, lacI family BB936_15405 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BB936_15410 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BB936_15420 PF03611 PTS system sugar-specific permease component BB936_15425 PF02371 Transposase IS116/IS110/IS902 family BB936_15425 PF01548 Transposase BB936_15430 PF00293 NUDIX domain BB936_15445 PF08338 Domain of unknown function (DUF1731) BB936_15445 PF01370 NAD dependent epimerase/dehydratase family BB936_15455 PF00005 ABC transporter BB936_15460 PF00528 Binding-protein-dependent transport system inner membrane component BB936_15465 PF00528 Binding-protein-dependent transport system inner membrane component BB936_15470 PF00497 Bacterial extracellular solute-binding proteins, family 3 BB936_15475 PF02441 Flavoprotein BB936_15480 PF00156 Phosphoribosyl transferase domain BB936_15485 PF02674 Colicin V production protein BB936_15490 PF05036 Sporulation related domain BB936_15495 PF08245 Mur ligase middle domain BB936_15495 PF02875 Mur ligase family, glutamate ligase domain BB936_15500 PF01039 Carboxyl transferase domain BB936_15500 PF17848 Acetyl-coA carboxylase zinc finger domain BB936_15505 PF09335 SNARE associated Golgi protein BB936_15510 PF01416 tRNA pseudouridine synthase BB936_15515 PF02774 Semialdehyde dehydrogenase, dimerisation domain BB936_15515 PF01118 Semialdehyde dehydrogenase, NAD binding domain BB936_15520 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BB936_15520 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BB936_15520 PF11890 Domain of unknown function (DUF3410) BB936_15535 PF00892 EamA-like transporter family BB936_15540 PF00155 Aminotransferase class I and II BB936_15545 PF00578 AhpC/TSA family BB936_15555 PF11412 Disulphide bond corrector protein DsbC BB936_15555 PF02683 Cytochrome C biogenesis protein transmembrane region BB936_15570 PF03600 Citrate transporter BB936_15575 PF00328 Histidine phosphatase superfamily (branch 2) BB936_15580 PF00356 Bacterial regulatory proteins, lacI family BB936_15585 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BB936_15590 PF02378 Phosphotransferase system, EIIC BB936_15595 PF00232 Glycosyl hydrolase family 1 BB936_15600 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BB936_15610 PF01177 Asp/Glu/Hydantoin racemase BB936_15620 PF00109 Beta-ketoacyl synthase, N-terminal domain BB936_15620 PF02801 Beta-ketoacyl synthase, C-terminal domain BB936_15625 PF01266 FAD dependent oxidoreductase BB936_15625 PF05430 S-adenosyl-L-methionine-dependent methyltransferase BB936_15630 PF08891 YfcL protein BB936_15635 PF04315 Elongation factor P hydroxylase BB936_15640 PF01925 Sulfite exporter TauE/SafE BB936_15645 PF03411 Penicillin-insensitive murein endopeptidase BB936_15650 PF01264 Chorismate synthase BB936_15655 PF05175 Methyltransferase small domain BB936_15660 PF01713 Smr domain BB936_15665 PF00300 Histidine phosphatase superfamily (branch 1) BB936_15670 PF00378 Enoyl-CoA hydratase/isomerase BB936_15670 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BB936_15670 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BB936_15675 PF02803 Thiolase, C-terminal domain BB936_15675 PF00108 Thiolase, N-terminal domain BB936_15680 PF04175 Protein of unknown function (DUF406) BB936_15685 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) BB936_15690 PF04333 MlaA lipoprotein BB936_15695 PF03918 Cytochrome C biogenesis protein BB936_15700 PF03918 Cytochrome C biogenesis protein BB936_15705 PF08534 Redoxin BB936_15710 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal BB936_15710 PF01578 Cytochrome C assembly protein BB936_15715 PF03100 CcmE BB936_15720 PF04995 Heme exporter protein D (CcmD) BB936_15725 PF01578 Cytochrome C assembly protein BB936_15730 PF03379 CcmB protein BB936_15735 PF00005 ABC transporter BB936_15740 PF02371 Transposase IS116/IS110/IS902 family BB936_15740 PF01548 Transposase BB936_15745 PF01226 Formate/nitrite transporter BB936_15755 PF00589 Phage integrase family BB936_15755 PF14659 Phage integrase, N-terminal SAM-like domain BB936_15755 PF13356 Arm DNA-binding domain BB936_15815 PF08274 PhnA Zinc-Ribbon BB936_15815 PF03831 PhnA domain BB936_15820 PF03551 Transcriptional regulator PadR-like family BB936_15830 PF00232 Glycosyl hydrolase family 1 BB936_15835 PF02378 Phosphotransferase system, EIIC BB936_15835 PF00367 phosphotransferase system, EIIB BB936_15840 PF00356 Bacterial regulatory proteins, lacI family BB936_15845 PF04264 YceI-like domain BB936_15850 PF01292 Prokaryotic cytochrome b561 BB936_15855 PF13472 GDSL-like Lipase/Acylhydrolase family BB936_15855 PF07859 alpha/beta hydrolase fold BB936_15875 PF00005 ABC transporter BB936_15880 PF02405 Permease MlaE BB936_15885 PF07690 Major Facilitator Superfamily BB936_15895 PF07969 Amidohydrolase family BB936_15900 PF00324 Amino acid permease BB936_15905 PF13406 Transglycosylase SLT domain BB936_15915 PF00528 Binding-protein-dependent transport system inner membrane component BB936_15920 PF00005 ABC transporter BB936_15940 PF01292 Prokaryotic cytochrome b561 BB936_15945 PF00155 Aminotransferase class I and II BB936_15955 PF07350 Protein of unknown function (DUF1479) BB936_15965 PF00072 Response regulator receiver domain BB936_15965 PF04397 LytTr DNA-binding domain BB936_15975 PF02685 Glucokinase BB936_15985 PF03466 LysR substrate binding domain BB936_15985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BB936_15990 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BB936_15990 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BB936_15990 PF00205 Thiamine pyrophosphate enzyme, central domain BB936_15995 PF00248 Aldo/keto reductase family BB936_16005 PF01566 Natural resistance-associated macrophage protein BB936_16010 PF07662 Na+ dependent nucleoside transporter C-terminus BB936_16010 PF07670 Nucleoside recognition BB936_16010 PF01773 Na+ dependent nucleoside transporter N-terminus BB936_16040 PF00749 tRNA synthetases class I (E and Q), catalytic domain BB936_16065 PF12843 Putative quorum-sensing-regulated virulence factor BB936_16070 PF03120 NAD-dependent DNA ligase OB-fold domain BB936_16070 PF01653 NAD-dependent DNA ligase adenylation domain BB936_16070 PF00533 BRCA1 C Terminus (BRCT) domain BB936_16070 PF12826 Helix-hairpin-helix motif BB936_16070 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BB936_16075 PF04354 ZipA, C-terminal FtsZ-binding domain BB936_16085 PF00291 Pyridoxal-phosphate dependent enzyme BB936_16090 PF00381 PTS HPr component phosphorylation site BB936_16095 PF05524 PEP-utilising enzyme, N-terminal BB936_16095 PF02896 PEP-utilising enzyme, TIM barrel domain BB936_16095 PF00391 PEP-utilising enzyme, mobile domain BB936_16100 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BB936_16105 PF00672 HAMP domain BB936_16105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BB936_16105 PF00512 His Kinase A (phospho-acceptor) domain BB936_16105 PF16527 Two-component sensor protein CpxA, periplasmic domain BB936_16110 PF00072 Response regulator receiver domain BB936_16110 PF00486 Transcriptional regulatory protein, C terminal BB936_16115 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BB936_16120 PF00005 ABC transporter BB936_16120 PF12704 MacB-like periplasmic core domain BB936_16120 PF02687 FtsX-like permease family BB936_16125 PF00291 Pyridoxal-phosphate dependent enzyme BB936_16130 PF00005 ABC transporter BB936_16135 PF00528 Binding-protein-dependent transport system inner membrane component BB936_16140 PF00528 Binding-protein-dependent transport system inner membrane component BB936_16150 PF07690 Major Facilitator Superfamily BB936_16155 PF01418 Helix-turn-helix domain, rpiR family BB936_16155 PF01380 SIS domain BB936_16160 PF04074 YhcH/YjgK/YiaL BB936_16165 PF00480 ROK family BB936_16170 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase BB936_16175 PF00701 Dihydrodipicolinate synthetase family BB936_16185 PF04261 Dyp-type peroxidase family BB936_16190 PF06572 Protein of unknown function (DUF1131) BB936_16195 PF04076 Bacterial OB fold (BOF) protein BB936_16200 PF00583 Acetyltransferase (GNAT) family BB936_16205 PF01218 Coproporphyrinogen III oxidase BB936_16210 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 BB936_16220 PF01515 Phosphate acetyl/butaryl transferase BB936_16220 PF00390 Malic enzyme, N-terminal domain BB936_16220 PF03949 Malic enzyme, NAD binding domain BB936_16225 PF00293 NUDIX domain BB936_16235 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) BB936_16240 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BB936_16240 PF00384 Molybdopterin oxidoreductase BB936_16240 PF10518 TAT (twin-arginine translocation) pathway signal sequence BB936_16240 PF01568 Molydopterin dinucleotide binding domain BB936_16245 PF03927 NapD protein BB936_16255 PF00072 Response regulator receiver domain BB936_16255 PF00196 Bacterial regulatory proteins, luxR family BB936_16265 PF00873 AcrB/AcrD/AcrF family BB936_16285 PF03960 ArsC family BB936_16290 PF07687 Peptidase dimerisation domain BB936_16290 PF01546 Peptidase family M20/M25/M40 BB936_16295 PF02557 D-alanyl-D-alanine carboxypeptidase BB936_16300 PF13980 Uncharacterised protein family (UPF0370) BB936_16315 PF13505 Outer membrane protein beta-barrel domain BB936_16330 PF01548 Transposase BB936_16330 PF02371 Transposase IS116/IS110/IS902 family BB936_16335 PF03245 Bacteriophage Rz lysis protein BB936_16340 PF02230 Phospholipase/Carboxylesterase BB936_16350 PF05127 Helicase BB936_16350 PF17176 tRNA-binding domain BB936_16350 PF13718 GNAT acetyltransferase 2 BB936_16355 PF04284 Protein of unknown function (DUF441) BB936_16360 PF04228 Putative neutral zinc metallopeptidase BB936_16365 PF01259 SAICAR synthetase BB936_16370 PF06804 NlpB/DapX lipoprotein BB936_16375 PF00701 Dihydrodipicolinate synthetase family BB936_16380 PF01842 ACT domain BB936_16385 PF00578 AhpC/TSA family BB936_16390 PF01594 AI-2E family transporter BB936_16395 PF01435 Peptidase family M48 BB936_16395 PF07720 Tetratricopeptide repeat BB936_16400 PF03960 ArsC family BB936_16405 PF00308 Bacterial dnaA protein BB936_16410 PF00860 Permease family BB936_16425 PF00551 Formyl transferase BB936_16430 PF13302 Acetyltransferase (GNAT) domain BB936_16440 PF00005 ABC transporter BB936_16445 PF00528 Binding-protein-dependent transport system inner membrane component BB936_16450 PF00528 Binding-protein-dependent transport system inner membrane component BB936_16455 PF13089 Polyphosphate kinase N-terminal domain BB936_16455 PF02503 Polyphosphate kinase middle domain BB936_16455 PF17941 Polyphosphate kinase C-terminal domain 1 BB936_16455 PF13090 Polyphosphate kinase C-terminal domain 2 BB936_16460 PF02541 Ppx/GppA phosphatase family BB936_16475 PF00563 EAL domain BB936_16475 PF00990 Diguanylate cyclase, GGDEF domain BB936_16475 PF13426 PAS domain BB936_16475 PF08448 PAS fold BB936_16475 PF08447 PAS fold BB936_16475 PF05231 MASE1 BB936_16480 PF00012 Hsp70 protein BB936_16485 PF13533 Biotin-lipoyl like BB936_16490 PF00873 AcrB/AcrD/AcrF family BB936_16495 PF00873 AcrB/AcrD/AcrF family BB936_16500 PF07690 Major Facilitator Superfamily BB936_16505 PF00672 HAMP domain BB936_16505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BB936_16505 PF00512 His Kinase A (phospho-acceptor) domain BB936_16510 PF00072 Response regulator receiver domain BB936_16510 PF00486 Transcriptional regulatory protein, C terminal BB936_16515 PF07411 Domain of unknown function (DUF1508) BB936_16525 PF00781 Diacylglycerol kinase catalytic domain BB936_16530 PF03608 PTS system enzyme II sorbitol-specific factor BB936_16535 PF03612 Sorbitol phosphotransferase enzyme II N-terminus BB936_16535 PF07663 Sorbitol phosphotransferase enzyme II C-terminus BB936_16540 PF03829 PTS system glucitol/sorbitol-specific IIA component BB936_16545 PF00106 short chain dehydrogenase BB936_16550 PF06923 Glucitol operon activator protein (GutM) BB936_16555 PF00455 DeoR C terminal sensor domain BB936_16555 PF08220 DeoR-like helix-turn-helix domain BB936_16560 PF00571 CBS domain BB936_16560 PF01380 SIS domain BB936_16575 PF08543 Phosphomethylpyrimidine kinase BB936_16600 PF00872 Transposase, Mutator family BB936_16640 PF02371 Transposase IS116/IS110/IS902 family BB936_16640 PF01548 Transposase BB936_16645 PF00034 Cytochrome c BB936_16645 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BB936_16650 PF05199 GMC oxidoreductase BB936_16650 PF00732 GMC oxidoreductase BB936_16665 PF00117 Glutamine amidotransferase class-I BB936_16665 PF00958 GMP synthase C terminal domain BB936_16665 PF02540 NAD synthase BB936_16670 PF00478 IMP dehydrogenase / GMP reductase domain BB936_16670 PF00571 CBS domain BB936_16675 PF13742 OB-fold nucleic acid binding domain BB936_16675 PF02601 Exonuclease VII, large subunit BB936_16680 PF07191 zinc-ribbons BB936_16690 PF02371 Transposase IS116/IS110/IS902 family BB936_16690 PF01548 Transposase BB936_16695 PF01926 50S ribosome-binding GTPase BB936_16695 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BB936_16705 PF13360 PQQ-like domain BB936_16715 PF03129 Anticodon binding domain BB936_16715 PF13393 Histidyl-tRNA synthetase BB936_16720 PF04551 GcpE protein BB936_16725 PF13464 Domain of unknown function (DUF4115) BB936_16735 PF04055 Radical SAM superfamily BB936_16740 PF00334 Nucleoside diphosphate kinase BB936_16750 PF00905 Penicillin binding protein transpeptidase domain BB936_16750 PF00912 Transglycosylase BB936_16750 PF06832 Penicillin-Binding Protein C-terminus Family BB936_16755 PF01835 MG2 domain BB936_16755 PF17962 Bacterial macroglobulin domain 6 BB936_16755 PF07703 Alpha-2-macroglobulin bait region domain BB936_16755 PF11974 Bacterial alpha-2-macroglobulin MG3 domain BB936_16755 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain BB936_16755 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain BB936_16755 PF00207 Alpha-2-macroglobulin family BB936_16755 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain BB936_16755 PF07678 A-macroglobulin TED domain BB936_16760 PF03212 Pertactin BB936_16760 PF03797 Autotransporter beta-domain BB936_16760 PF16168 Adhesin of bacterial autotransporter system, probable stalk BB936_16765 PF14581 SseB protein C-terminal domain BB936_16765 PF07179 SseB protein N-terminal domain BB936_16770 PF00883 Cytosol aminopeptidase family, catalytic domain BB936_16770 PF12404 Peptidase BB936_16775 PF04384 Iron-sulphur cluster assembly BB936_16780 PF00111 2Fe-2S iron-sulfur cluster binding domain BB936_16785 PF00012 Hsp70 protein BB936_16790 PF07743 HSCB C-terminal oligomerisation domain BB936_16790 PF00226 DnaJ domain BB936_16795 PF01521 Iron-sulphur cluster biosynthesis BB936_16800 PF01592 NifU-like N terminal domain BB936_16805 PF00266 Aminotransferase class-V BB936_16810 PF02082 Transcriptional regulator BB936_16815 PF00588 SpoU rRNA Methylase family BB936_16820 PF00459 Inositol monophosphatase family BB936_16825 PF03824 High-affinity nickel-transport protein BB936_16830 PF06226 Protein of unknown function (DUF1007) BB936_16835 PF00874 PRD domain BB936_16840 PF12832 MFS_1 like family BB936_16845 PF00464 Serine hydroxymethyltransferase BB936_16850 PF00175 Oxidoreductase NAD-binding domain BB936_16850 PF00042 Globin BB936_16850 PF00970 Oxidoreductase FAD-binding domain BB936_16855 PF14502 Helix-turn-helix domain BB936_16855 PF14503 YhfZ C-terminal domain BB936_16865 PF01168 Alanine racemase, N-terminal domain BB936_16870 PF02126 Phosphotriesterase family BB936_16875 PF10941 Protein of unknown function DUF2620 BB936_16880 PF10797 Protein of unknown function BB936_16885 PF00543 Nitrogen regulatory protein P-II BB936_16890 PF00795 Carbon-nitrogen hydrolase BB936_16890 PF02540 NAD synthase BB936_16895 PF00158 Sigma-54 interaction domain BB936_16895 PF00072 Response regulator receiver domain BB936_16900 PF13942 YfhG lipoprotein BB936_16905 PF00512 His Kinase A (phospho-acceptor) domain BB936_16905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BB936_16915 PF02769 AIR synthase related protein, C-terminal domain BB936_16915 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BB936_16915 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal BB936_16920 PF00497 Bacterial extracellular solute-binding proteins, family 3 BB936_16920 PF01464 Transglycosylase SLT domain BB936_16925 PF14437 MafB19-like deaminase BB936_16940 PF01380 SIS domain BB936_16945 PF01418 Helix-turn-helix domain, rpiR family BB936_16945 PF01380 SIS domain BB936_16950 PF12838 4Fe-4S dicluster domain BB936_16960 PF01648 4'-phosphopantetheinyl transferase superfamily BB936_16965 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ BB936_16970 PF11967 Recombination protein O N terminal BB936_16970 PF02565 Recombination protein O C terminal BB936_16975 PF07650 KH domain BB936_16975 PF01926 50S ribosome-binding GTPase BB936_16980 PF14622 Ribonuclease-III-like BB936_16980 PF00035 Double-stranded RNA binding motif BB936_16985 PF10502 Signal peptidase, peptidase S26 BB936_16990 PF00009 Elongation factor Tu GTP binding domain BB936_16990 PF00679 Elongation factor G C-terminus BB936_16990 PF06421 GTP-binding protein LepA C-terminus BB936_16990 PF03144 Elongation factor Tu domain 2 BB936_17005 PF17188 MucB/RseB C-terminal domain BB936_17005 PF03888 MucB/RseB N-terminal domain BB936_17010 PF03872 Anti sigma-E protein RseA, N-terminal domain BB936_17010 PF03873 Anti sigma-E protein RseA, C-terminal domain BB936_17015 PF04542 Sigma-70 region 2 BB936_17015 PF08281 Sigma-70, region 4 BB936_17020 PF02910 Fumarate reductase flavoprotein C-term BB936_17020 PF00890 FAD binding domain BB936_17025 PF05175 Methyltransferase small domain BB936_17030 PF00271 Helicase conserved C-terminal domain BB936_17030 PF00270 DEAD/DEAH box helicase BB936_17035 PF02371 Transposase IS116/IS110/IS902 family BB936_17035 PF01548 Transposase BB936_17040 PF01548 Transposase BB936_17040 PF02371 Transposase IS116/IS110/IS902 family BB936_17045 PF12796 Ankyrin repeats (3 copies) BB936_17060 PF01228 Glycine radical BB936_17065 PF03167 Uracil DNA glycosylase superfamily BB936_17070 PF01025 GrpE BB936_17075 PF01513 ATP-NAD kinase BB936_17080 PF02463 RecF/RecN/SMC N terminal domain BB936_17085 PF04355 SmpA / OmlA family BB936_17090 PF03658 RnfH family Ubiquitin BB936_17095 PF03364 Polyketide cyclase / dehydrase and lipid transport BB936_17100 PF01668 SmpB protein BB936_17115 PF01740 STAS domain BB936_17115 PF00916 Sulfate permease family BB936_17120 PF04794 YdjC-like protein BB936_17125 PF07883 Cupin domain BB936_17125 PF12833 Helix-turn-helix domain BB936_17130 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BB936_17135 PF00232 Glycosyl hydrolase family 1 BB936_17140 PF02378 Phosphotransferase system, EIIC BB936_17145 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BB936_17160 PF00248 Aldo/keto reductase family BB936_17165 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BB936_17170 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BB936_17175 PF07885 Ion channel BB936_17175 PF02254 TrkA-N domain BB936_17180 PF06411 HdeA/HdeB family BB936_17185 PF03824 High-affinity nickel-transport protein BB936_17190 PF03253 Urea transporter BB936_17195 PF01774 UreD urease accessory protein BB936_17200 PF02492 CobW/HypB/UreG, nucleotide-binding domain BB936_17205 PF01730 UreF BB936_17210 PF02814 UreE urease accessory protein, N-terminal domain BB936_17210 PF05194 UreE urease accessory protein, C-terminal domain BB936_17215 PF01979 Amidohydrolase family BB936_17215 PF00449 Urease alpha-subunit, N-terminal domain BB936_17220 PF00699 Urease beta subunit BB936_17225 PF00547 Urease, gamma subunit BB936_17230 PF00005 ABC transporter BB936_17235 PF00005 ABC transporter BB936_17240 PF00528 Binding-protein-dependent transport system inner membrane component BB936_17240 PF12911 N-terminal TM domain of oligopeptide transport permease C BB936_17245 PF00528 Binding-protein-dependent transport system inner membrane component BB936_17250 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BB936_17275 PF00313 'Cold-shock' DNA-binding domain BB936_17290 PF09400 Protein of unknown function (DUF2002) BB936_17295 PF07690 Major Facilitator Superfamily BB936_17300 PF12833 Helix-turn-helix domain BB936_17310 PF06392 Acid shock protein repeat BB936_17315 PF05957 Bacterial protein of unknown function (DUF883) BB936_17320 PF00392 Bacterial regulatory proteins, gntR family BB936_17320 PF00155 Aminotransferase class I and II BB936_17325 PF02627 Carboxymuconolactone decarboxylase family BB936_17335 PF07972 NrdI Flavodoxin like BB936_17340 PF00317 Ribonucleotide reductase, all-alpha domain BB936_17340 PF02867 Ribonucleotide reductase, barrel domain BB936_17340 PF08343 Ribonucleotide reductase N-terminal BB936_17345 PF00268 Ribonucleotide reductase, small chain BB936_17350 PF00005 ABC transporter BB936_17350 PF00571 CBS domain BB936_17355 PF00528 Binding-protein-dependent transport system inner membrane component BB936_17360 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BB936_17370 PF00929 Exonuclease BB936_17375 PF00075 RNase H BB936_17380 PF08241 Methyltransferase domain BB936_17385 PF16123 Hydroxyacylglutathione hydrolase C-terminus BB936_17385 PF00753 Metallo-beta-lactamase superfamily BB936_17390 PF01464 Transglycosylase SLT domain BB936_17390 PF01476 LysM domain BB936_17395 PF01548 Transposase BB936_17395 PF02371 Transposase IS116/IS110/IS902 family BB936_17400 PF03372 Endonuclease/Exonuclease/phosphatase family BB936_17405 PF07690 Major Facilitator Superfamily BB936_17410 PF03466 LysR substrate binding domain BB936_17410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BB936_17415 PF00248 Aldo/keto reductase family BB936_17425 PF00872 Transposase, Mutator family BB936_17465 PF09383 NIL domain BB936_17465 PF00005 ABC transporter BB936_17470 PF00528 Binding-protein-dependent transport system inner membrane component BB936_17475 PF03180 NLPA lipoprotein BB936_17480 PF16358 RcsF lipoprotein BB936_17485 PF01980 tRNA-methyltransferase O BB936_17485 PF18389 TrmO C-terminal domain BB936_17490 PF03129 Anticodon binding domain BB936_17490 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BB936_17490 PF04073 Aminoacyl-tRNA editing domain BB936_17495 PF17185 NlpE C-terminal OB domain BB936_17495 PF04170 NlpE N-terminal domain BB936_17500 PF00472 RF-1 domain BB936_17505 PF07152 YaeQ protein BB936_17515 PF07073 Modulator of Rho-dependent transcription termination (ROF) BB936_17520 PF00034 Cytochrome c BB936_17525 PF01171 PP-loop family BB936_17525 PF09179 TilS substrate binding domain BB936_17525 PF11734 TilS substrate C-terminal domain BB936_17530 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BB936_17540 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BB936_17545 PF14579 Helix-hairpin-helix motif BB936_17545 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BB936_17545 PF01336 OB-fold nucleic acid binding domain BB936_17545 PF07733 Bacterial DNA polymerase III alpha NTPase domain BB936_17545 PF02811 PHP domain BB936_17550 PF01351 Ribonuclease HII BB936_17555 PF02684 Lipid-A-disaccharide synthetase BB936_17565 PF07977 FabA-like domain BB936_17570 PF00132 Bacterial transferase hexapeptide (six repeats) BB936_17570 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD BB936_17575 PF03938 Outer membrane protein (OmpH-like) BB936_17580 PF07244 Surface antigen variable number repeat BB936_17580 PF01103 Surface antigen BB936_17585 PF02163 Peptidase family M50 BB936_17585 PF17820 PDZ domain BB936_17595 PF01255 Putative undecaprenyl diphosphate synthase BB936_17600 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BB936_17600 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BB936_17600 PF13288 DXP reductoisomerase C-terminal domain BB936_17605 PF01765 Ribosome recycling factor BB936_17610 PF00696 Amino acid kinase family BB936_17615 PF00889 Elongation factor TS BB936_17620 PF00318 Ribosomal protein S2 BB936_17630 PF01842 ACT domain BB936_17630 PF08335 GlnD PII-uridylyltransferase BB936_17630 PF01966 HD domain BB936_17630 PF01909 Nucleotidyltransferase domain BB936_17635 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal BB936_17635 PF14602 Hexapeptide repeat of succinyl-transferase BB936_17635 PF00132 Bacterial transferase hexapeptide (six repeats) BB936_17640 PF11944 Protein of unknown function (DUF3461) BB936_17645 PF00258 Flavodoxin BB936_17650 PF00849 RNA pseudouridylate synthase BB936_17655 PF04287 tRNA pseudouridine synthase C BB936_17660 PF07348 Syd protein (SUKH-2) BB936_17665 PF14489 QueF-like protein BB936_17665 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term BB936_17670 PF03641 Possible lysine decarboxylase BB936_17670 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases BB936_17670 PF11892 Domain of unknown function (DUF3412) BB936_17675 PF01367 5'-3' exonuclease, C-terminal SAM fold BB936_17675 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BB936_17680 PF01548 Transposase BB936_17680 PF02371 Transposase IS116/IS110/IS902 family BB936_17685 PF18125 RlmM ferredoxin-like domain BB936_17685 PF01728 FtsJ-like methyltransferase BB936_17690 PF04241 Protein of unknown function (DUF423) BB936_17695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BB936_17695 PF03466 LysR substrate binding domain BB936_17700 PF06004 Bacterial protein of unknown function (DUF903) BB936_17705 PF00266 Aminotransferase class-V BB936_17710 PF02657 Fe-S metabolism associated domain BB936_17715 PF00899 ThiF family BB936_17720 PF06725 3D domain BB936_17720 PF03562 MltA specific insert domain BB936_17740 PF11741 AMIN domain BB936_17740 PF01520 N-acetylmuramoyl-L-alanine amidase BB936_17745 PF00583 Acetyltransferase (GNAT) family BB936_17745 PF00696 Amino acid kinase family BB936_17750 PF01548 Transposase BB936_17750 PF02371 Transposase IS116/IS110/IS902 family BB936_17755 PF13538 UvrD-like helicase C-terminal domain BB936_17760 PF13361 UvrD-like helicase C-terminal domain BB936_17760 PF12705 PD-(D/E)XK nuclease superfamily BB936_17760 PF00580 UvrD/REP helicase N-terminal domain BB936_17765 PF05193 Peptidase M16 inactive domain BB936_17765 PF16187 Middle or third domain of peptidase_M16 BB936_17765 PF00675 Insulinase (Peptidase family M16) BB936_17770 PF17946 RecC C-terminal domain BB936_17775 PF07963 Prokaryotic N-terminal methylation motif BB936_17775 PF12528 Type II secretion prepilin peptidase dependent protein C BB936_17795 PF00303 Thymidylate synthase BB936_17800 PF01790 Prolipoprotein diacylglyceryl transferase BB936_17805 PF02896 PEP-utilising enzyme, TIM barrel domain BB936_17805 PF00391 PEP-utilising enzyme, mobile domain BB936_17805 PF05524 PEP-utilising enzyme, N-terminal BB936_17805 PF01590 GAF domain BB936_17820 PF02976 DNA mismatch repair enzyme MutH BB936_17825 PF03741 Integral membrane protein TerC family BB936_17830 PF00248 Aldo/keto reductase family BB936_17840 PF01553 Acyltransferase BB936_17840 PF00501 AMP-binding enzyme BB936_17840 PF13193 AMP-binding enzyme C-terminal domain BB936_17845 PF00384 Molybdopterin oxidoreductase BB936_17845 PF01568 Molydopterin dinucleotide binding domain BB936_17850 PF00356 Bacterial regulatory proteins, lacI family BB936_17855 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BB936_17855 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BB936_17860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BB936_17860 PF03466 LysR substrate binding domain BB936_17865 PF07690 Major Facilitator Superfamily BB936_17870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BB936_17870 PF03466 LysR substrate binding domain BB936_17935 PF08334 Type II secretion system (T2SS), protein G BB936_17935 PF07963 Prokaryotic N-terminal methylation motif BB936_17965 PF00484 Carbonic anhydrase BB936_17970 PF01638 HxlR-like helix-turn-helix BB936_17985 PF01556 DnaJ C terminal domain BB936_17985 PF00226 DnaJ domain BB936_17990 PF00990 Diguanylate cyclase, GGDEF domain BB936_17990 PF08448 PAS fold BB936_17995 PF13474 SnoaL-like domain BB936_18010 PF00872 Transposase, Mutator family BB936_18015 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA BB936_18020 PF15723 Motility quorum-sensing regulator, toxin of MqsA BB936_18035 PF13358 DDE superfamily endonuclease BB936_18035 PF13592 Winged helix-turn helix BB936_18045 PF00152 tRNA synthetases class II (D, K and N) BB936_18045 PF01336 OB-fold nucleic acid binding domain BB936_18050 PF03462 PCRF domain BB936_18050 PF00472 RF-1 domain BB936_18055 PF02272 DHHA1 domain BB936_18055 PF17768 RecJ OB domain BB936_18055 PF01368 DHH family BB936_18060 PF13098 Thioredoxin-like domain BB936_18060 PF10411 Disulfide bond isomerase protein N-terminus BB936_18065 PF00589 Phage integrase family BB936_18065 PF02899 Phage integrase, N-terminal SAM-like domain BB936_18070 PF00258 Flavodoxin BB936_18075 PF06123 Inner membrane protein CreD BB936_18080 PF00672 HAMP domain BB936_18080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BB936_18080 PF00512 His Kinase A (phospho-acceptor) domain BB936_18085 PF00072 Response regulator receiver domain BB936_18085 PF00486 Transcriptional regulatory protein, C terminal BB936_18090 PF07254 Membrane-bound toxin component of toxin-antitoxin system BB936_18095 PF03937 Flavinator of succinate dehydrogenase BB936_18100 PF01571 Aminomethyltransferase folate-binding domain BB936_18105 PF02371 Transposase IS116/IS110/IS902 family BB936_18105 PF01548 Transposase BB936_18110 PF03006 Haemolysin-III related BB936_18135 PF02347 Glycine cleavage system P-protein BB936_18140 PF01597 Glycine cleavage H-protein BB936_18145 PF08669 Glycine cleavage T-protein C-terminal barrel domain BB936_18145 PF01571 Aminomethyltransferase folate-binding domain BB936_18150 PF01494 FAD binding domain BB936_18155 PF01494 FAD binding domain BB936_18160 PF05195 Aminopeptidase P, N-terminal domain BB936_18160 PF00557 Metallopeptidase family M24 BB936_18165 PF03695 Uncharacterised protein family (UPF0149) BB936_18170 PF05164 Cell division protein ZapA BB936_18180 PF01812 5-formyltetrahydrofolate cyclo-ligase family BB936_18185 PF00113 Enolase, C-terminal TIM barrel domain BB936_18185 PF03952 Enolase, N-terminal domain BB936_18190 PF06418 CTP synthase N-terminus BB936_18190 PF00117 Glutamine amidotransferase class-I BB936_18195 PF03819 MazG nucleotide pyrophosphohydrolase domain BB936_18200 PF02824 TGS domain BB936_18200 PF04607 Region found in RelA / SpoT proteins BB936_18200 PF13291 ACT domain BB936_18205 PF01938 TRAM domain BB936_18205 PF05958 tRNA (Uracil-5-)-methyltransferase BB936_18210 PF00072 Response regulator receiver domain BB936_18210 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BB936_18210 PF01627 Hpt domain BB936_18210 PF00672 HAMP domain BB936_18210 PF00512 His Kinase A (phospho-acceptor) domain BB936_18210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BB936_18215 PF00595 PDZ domain BB936_18220 PF01966 HD domain BB936_18220 PF13286 Phosphohydrolase-associated domain BB936_18225 PF01048 Phosphorylase superfamily BB936_18230 PF01497 Periplasmic binding protein BB936_18235 PF03458 UPF0126 domain BB936_18240 PF01521 Iron-sulphur cluster biosynthesis BB936_18245 PF00654 Voltage gated chloride channel BB936_18250 PF00202 Aminotransferase class-III BB936_18255 PF07690 Major Facilitator Superfamily BB936_18260 PF01032 FecCD transport family BB936_18265 PF01497 Periplasmic binding protein BB936_18270 PF00005 ABC transporter BB936_18275 PF00905 Penicillin binding protein transpeptidase domain BB936_18275 PF14814 Bifunctional transglycosylase second domain BB936_18275 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal BB936_18275 PF00912 Transglycosylase BB936_18280 PF08482 ATP-dependent helicase C-terminal BB936_18280 PF00271 Helicase conserved C-terminal domain BB936_18280 PF04408 Helicase associated domain (HA2) BB936_18280 PF00270 DEAD/DEAH box helicase BB936_18285 PF02834 LigT like Phosphoesterase BB936_18290 PF17746 SfsA N-terminal OB domain BB936_18290 PF03749 Sugar fermentation stimulation protein RE domain BB936_18295 PF01258 Prokaryotic dksA/traR C4-type zinc finger BB936_18300 PF00749 tRNA synthetases class I (E and Q), catalytic domain BB936_18305 PF12626 Polymerase A arginine-rich C-terminus BB936_18305 PF12627 Probable RNA and SrmB- binding site of polymerase A BB936_18305 PF01743 Poly A polymerase head domain BB936_18310 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BB936_18315 PF02548 Ketopantoate hydroxymethyltransferase BB936_18320 PF02569 Pantoate-beta-alanine ligase BB936_18325 PF02261 Aspartate decarboxylase BB936_18330 PF01522 Polysaccharide deacetylase BB936_18335 PF01061 ABC-2 type transporter BB936_18340 PF00005 ABC transporter BB936_18345 PF00484 Carbonic anhydrase BB936_18350 PF00156 Phosphoribosyl transferase domain BB936_18355 PF10518 TAT (twin-arginine translocation) pathway signal sequence BB936_18355 PF00394 Multicopper oxidase BB936_18355 PF07731 Multicopper oxidase BB936_18355 PF07732 Multicopper oxidase BB936_18360 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) BB936_18365 PF17284 Spermidine synthase tetramerisation domain BB936_18370 PF02675 S-adenosylmethionine decarboxylase BB936_18375 PF18624 CDI immunity protein BB936_18380 PF00892 EamA-like transporter family BB936_18385 PF06062 Uncharacterised protein family (UPF0231) BB936_18395 PF07715 TonB-dependent Receptor Plug Domain BB936_18395 PF00593 TonB dependent receptor BB936_18400 PF01965 DJ-1/PfpI family BB936_18400 PF12833 Helix-turn-helix domain BB936_18410 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BB936_18410 PF07992 Pyridine nucleotide-disulphide oxidoreductase BB936_18415 PF00364 Biotin-requiring enzyme BB936_18415 PF02817 e3 binding domain BB936_18415 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BB936_18420 PF00456 Transketolase, thiamine diphosphate binding domain BB936_18420 PF17831 Pyruvate dehydrogenase E1 component middle domain BB936_18425 PF07729 FCD domain BB936_18425 PF00392 Bacterial regulatory proteins, gntR family BB936_18430 PF00324 Amino acid permease BB936_18435 PF17113 Regulatory signalling modulator protein AmpE BB936_18440 PF01510 N-acetylmuramoyl-L-alanine amidase BB936_18445 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BB936_18445 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BB936_18450 PF07963 Prokaryotic N-terminal methylation motif BB936_18455 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BB936_18455 PF00437 Type II/IV secretion system protein BB936_18460 PF00482 Type II secretion system (T2SS), protein F BB936_18465 PF00478 IMP dehydrogenase / GMP reductase domain BB936_18470 PF01121 Dephospho-CoA kinase BB936_18475 PF07072 Cell division protein BB936_18480 PF03884 DNA gyrase inhibitor YacG BB936_18485 PF00293 NUDIX domain BB936_18490 PF02810 SEC-C motif BB936_18490 PF07516 SecA Wing and Scaffold domain BB936_18490 PF01043 SecA preprotein cross-linking domain BB936_18490 PF07517 SecA DEAD-like domain BB936_18495 PF06558 Secretion monitor precursor protein (SecM) BB936_18505 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase BB936_18510 PF12327 FtsZ family, C-terminal domain BB936_18510 PF00091 Tubulin/FtsZ family, GTPase domain BB936_18515 PF02491 SHS2 domain inserted in FTSA BB936_18520 PF03799 Cell division protein FtsQ BB936_18520 PF08478 POTRA domain, FtsQ-type BB936_18525 PF07478 D-ala D-ala ligase C-terminus BB936_18525 PF01820 D-ala D-ala ligase N-terminus BB936_18530 PF02875 Mur ligase family, glutamate ligase domain BB936_18530 PF08245 Mur ligase middle domain BB936_18530 PF01225 Mur ligase family, catalytic domain BB936_18535 PF04101 Glycosyltransferase family 28 C-terminal domain BB936_18535 PF03033 Glycosyltransferase family 28 N-terminal domain BB936_18540 PF01098 Cell cycle protein BB936_18545 PF02875 Mur ligase family, glutamate ligase domain BB936_18545 PF08245 Mur ligase middle domain BB936_18550 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 BB936_18550 PF00953 Glycosyl transferase family 4 BB936_18555 PF08245 Mur ligase middle domain BB936_18555 PF01225 Mur ligase family, catalytic domain BB936_18555 PF02875 Mur ligase family, glutamate ligase domain BB936_18560 PF02875 Mur ligase family, glutamate ligase domain BB936_18560 PF08245 Mur ligase middle domain BB936_18560 PF01225 Mur ligase family, catalytic domain BB936_18565 PF00905 Penicillin binding protein transpeptidase domain BB936_18565 PF03717 Penicillin-binding Protein dimerisation domain BB936_18575 PF01795 MraW methylase family BB936_18580 PF02381 MraZ protein, putative antitoxin-like BB936_18585 PF06610 L-alanine exporter BB936_18590 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BB936_18590 PF00356 Bacterial regulatory proteins, lacI family BB936_18600 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BB936_18600 PF00205 Thiamine pyrophosphate enzyme, central domain BB936_18600 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BB936_18605 PF00501 AMP-binding enzyme BB936_18610 PF03466 LysR substrate binding domain BB936_18610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BB936_18615 PF00682 HMGL-like BB936_18615 PF08502 LeuA allosteric (dimerisation) domain BB936_18620 PF00180 Isocitrate/isopropylmalate dehydrogenase BB936_18625 PF00330 Aconitase family (aconitate hydratase) BB936_18630 PF00694 Aconitase C-terminal domain BB936_18640 PF03222 Tryptophan/tyrosine permease family BB936_18645 PF07690 Major Facilitator Superfamily BB936_18655 PF04055 Radical SAM superfamily BB936_18660 PF12793 Sugar transport-related sRNA regulator N-term BB936_18660 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BB936_18680 PF00528 Binding-protein-dependent transport system inner membrane component BB936_18685 PF00005 ABC transporter BB936_18690 PF09335 SNARE associated Golgi protein BB936_18695 PF00136 DNA polymerase family B BB936_18695 PF03104 DNA polymerase family B, exonuclease domain BB936_18700 PF12137 RNA polymerase recycling family C-terminal BB936_18700 PF00176 SNF2 family N-terminal domain BB936_18700 PF00271 Helicase conserved C-terminal domain BB936_18700 PF18339 RapA N-terminal Tudor like domain 1 BB936_18700 PF18337 RapA N-terminal Tudor like domain BB936_18705 PF02369 Bacterial Ig-like domain (group 1) BB936_18705 PF07979 Intimin C-type lectin domain BB936_18705 PF09134 Invasin, domain 3 BB936_18705 PF11924 Inverse autotransporter, beta-domain BB936_18710 PF00849 RNA pseudouridylate synthase BB936_18715 PF00226 DnaJ domain BB936_18715 PF05099 Tellurite resistance protein TerB BB936_18720 PF04453 LPS transport system D BB936_18720 PF03968 OstA-like protein BB936_18725 PF00639 PPIC-type PPIASE domain BB936_18725 PF09312 SurA N-terminal domain BB936_18730 PF04166 Pyridoxal phosphate biosynthetic protein PdxA BB936_18735 PF00398 Ribosomal RNA adenine dimethylase BB936_18740 PF04379 ApaG domain BB936_18745 PF00149 Calcineurin-like phosphoesterase BB936_18750 PF00186 Dihydrofolate reductase BB936_18755 PF12821 Threonine/Serine exporter, ThrE BB936_18760 PF06738 Putative threonine/serine exporter BB936_18765 PF01810 LysE type translocator BB936_18770 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BB936_18770 PF02142 MGS-like domain BB936_18770 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BB936_18775 PF00117 Glutamine amidotransferase class-I BB936_18775 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BB936_18780 PF05173 Dihydrodipicolinate reductase, C-terminus BB936_18780 PF01113 Dihydrodipicolinate reductase, N-terminus BB936_18785 PF02401 LytB protein BB936_18790 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BB936_18795 PF01252 Signal peptidase (SPase) II BB936_18800 PF00133 tRNA synthetases class I (I, L, M and V) BB936_18800 PF06827 Zinc finger found in FPG and IleRS BB936_18800 PF08264 Anticodon-binding domain of tRNA BB936_18805 PF01687 Riboflavin kinase BB936_18805 PF06574 FAD synthetase BB936_18815 PF01649 Ribosomal protein S20 BB936_18820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BB936_18820 PF03466 LysR substrate binding domain BB936_18825 PF06965 Na+/H+ antiporter 1 BB936_18830 PF00226 DnaJ domain BB936_18830 PF01556 DnaJ C terminal domain BB936_18830 PF00684 DnaJ central domain BB936_18835 PF00012 Hsp70 protein BB936_18840 PF01184 GPR1/FUN34/yaaH family BB936_18850 PF07690 Major Facilitator Superfamily BB936_18855 PF00994 Probable molybdopterin binding domain BB936_18860 PF00923 Transaldolase/Fructose-6-phosphate aldolase BB936_18865 PF03883 Peroxide stress protein YaaA BB936_18870 PF14821 Threonine synthase N terminus BB936_18870 PF00291 Pyridoxal-phosphate dependent enzyme BB936_18875 PF00288 GHMP kinases N terminal domain BB936_18875 PF08544 GHMP kinases C terminal BB936_18880 PF00742 Homoserine dehydrogenase BB936_18880 PF13840 ACT domain BB936_18880 PF01842 ACT domain BB936_18880 PF00696 Amino acid kinase family BB936_18880 PF03447 Homoserine dehydrogenase, NAD binding domain BB936_18890 PF00486 Transcriptional regulatory protein, C terminal BB936_18890 PF00072 Response regulator receiver domain BB936_18895 PF05981 CreA protein BB936_18900 PF06445 GyrI-like small molecule binding domain BB936_18900 PF12833 Helix-turn-helix domain BB936_18905 PF00300 Histidine phosphatase superfamily (branch 1) BB936_18915 PF01371 Trp repressor protein BB936_18920 PF14718 Soluble lytic murein transglycosylase L domain BB936_18920 PF01464 Transglycosylase SLT domain BB936_18925 PF00689 Cation transporting ATPase, C-terminus BB936_18925 PF00690 Cation transporter/ATPase, N-terminus BB936_18935 PF00990 Diguanylate cyclase, GGDEF domain BB936_18935 PF17152 Periplasmic sensor domain BB936_18940 PF00691 OmpA family BB936_18945 PF00005 ABC transporter BB936_18945 PF12848 ABC transporter BB936_18955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BB936_18955 PF03466 LysR substrate binding domain BB936_18960 PF00107 Zinc-binding dehydrogenase BB936_18960 PF08240 Alcohol dehydrogenase GroES-like domain BB936_18975 PF18429 Domain of unknown function (DUF5609) BB936_18980 PF10144 Bacterial virulence factor haemolysin BB936_18985 PF01048 Phosphorylase superfamily BB936_18990 PF01676 Metalloenzyme superfamily BB936_18995 PF00591 Glycosyl transferase family, a/b domain BB936_18995 PF02885 Glycosyl transferase family, helical bundle domain BB936_18995 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain BB936_19000 PF01791 DeoC/LacD family aldolase BB936_19005 PF01773 Na+ dependent nucleoside transporter N-terminus BB936_19005 PF07662 Na+ dependent nucleoside transporter C-terminus BB936_19005 PF07670 Nucleoside recognition BB936_19010 PF01026 TatD related DNase BB936_19015 PF01734 Patatin-like phospholipase BB936_19020 PF07043 Protein of unknown function (DUF1328) BB936_19025 PF04972 BON domain BB936_19030 PF00009 Elongation factor Tu GTP binding domain BB936_19030 PF03144 Elongation factor Tu domain 2 BB936_19030 PF16658 Class II release factor RF3, C-terminal domain BB936_19035 PF00583 Acetyltransferase (GNAT) family BB936_19040 PF03603 DNA polymerase III psi subunit BB936_19045 PF05175 Methyltransferase small domain BB936_19045 PF08468 Methyltransferase small domain N-terminal BB936_19050 PF00248 Aldo/keto reductase family BB936_19065 PF07256 Protein of unknown function (DUF1435) BB936_19070 PF00990 Diguanylate cyclase, GGDEF domain BB936_19075 PF07715 TonB-dependent Receptor Plug Domain BB936_19075 PF00593 TonB dependent receptor BB936_19075 PF07660 Secretin and TonB N terminus short domain BB936_19085 PF00294 pfkB family carbohydrate kinase BB936_19090 PF02264 LamB porin BB936_19090 PF11471 Maltoporin periplasmic N-terminal extension BB936_19095 PF02378 Phosphotransferase system, EIIC BB936_19095 PF00367 phosphotransferase system, EIIB BB936_19100 PF00251 Glycosyl hydrolases family 32 N-terminal domain BB936_19100 PF08244 Glycosyl hydrolases family 32 C terminal BB936_19105 PF13407 Periplasmic binding protein domain BB936_19105 PF00356 Bacterial regulatory proteins, lacI family BB936_19110 PF02954 Bacterial regulatory protein, Fis family BB936_19110 PF00989 PAS fold BB936_19110 PF00158 Sigma-54 interaction domain BB936_19115 PF01095 Pectinesterase BB936_19140 PF16861 Carbamoyltransferase C-terminus BB936_19140 PF02543 Carbamoyltransferase N-terminus BB936_19150 PF03610 PTS system fructose IIA component BB936_19150 PF05524 PEP-utilising enzyme, N-terminal BB936_19150 PF00391 PEP-utilising enzyme, mobile domain BB936_19150 PF00381 PTS HPr component phosphorylation site BB936_19155 PF02734 DAK2 domain BB936_19160 PF02733 Dak1 domain BB936_19165 PF00465 Iron-containing alcohol dehydrogenase BB936_19170 PF00873 AcrB/AcrD/AcrF family BB936_19195 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BB936_19200 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BB936_19200 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BB936_19205 PF00325 Bacterial regulatory proteins, crp family BB936_19205 PF04198 Putative sugar-binding domain BB936_19210 PF00005 ABC transporter BB936_19215 PF02653 Branched-chain amino acid transport system / permease component BB936_19220 PF02653 Branched-chain amino acid transport system / permease component BB936_19225 PF13407 Periplasmic binding protein domain BB936_19230 PF01791 DeoC/LacD family aldolase BB936_19235 PF03992 Antibiotic biosynthesis monooxygenase BB936_19245 PF10696 Protein of unknown function (DUF2501) BB936_19250 PF00872 Transposase, Mutator family BB936_19260 PF01527 Transposase BB936_19280 PF03739 Lipopolysaccharide export system permease LptF/LptG BB936_19285 PF03739 Lipopolysaccharide export system permease LptF/LptG BB936_19290 PF00883 Cytosol aminopeptidase family, catalytic domain BB936_19290 PF02789 Cytosol aminopeptidase family, N-terminal domain BB936_19295 PF04364 DNA polymerase III chi subunit, HolC BB936_19300 PF08264 Anticodon-binding domain of tRNA BB936_19300 PF00133 tRNA synthetases class I (I, L, M and V) BB936_19300 PF10458 Valyl tRNA synthetase tRNA binding arm BB936_19305 PF00583 Acetyltransferase (GNAT) family BB936_19310 PF06877 Regulator of ribonuclease activity B BB936_19315 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BB936_19315 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BB936_19320 PF04074 YhcH/YjgK/YiaL BB936_19330 PF00528 Binding-protein-dependent transport system inner membrane component BB936_19340 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BB936_19340 PF00005 ABC transporter BB936_19345 PF00005 ABC transporter BB936_19345 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BB936_19375 PF07702 UTRA domain BB936_19375 PF00392 Bacterial regulatory proteins, gntR family BB936_19380 PF06754 Phosphonate metabolism protein PhnG BB936_19385 PF05845 Bacterial phosphonate metabolism protein (PhnH) BB936_19390 PF05861 Bacterial phosphonate metabolism protein (PhnI) BB936_19395 PF06007 Phosphonate metabolism protein PhnJ BB936_19400 PF00005 ABC transporter BB936_19405 PF00005 ABC transporter BB936_19410 PF07969 Amidohydrolase family BB936_19420 PF12706 Beta-lactamase superfamily domain BB936_19425 PF13460 NAD(P)H-binding BB936_19430 PF05016 ParE toxin of type II toxin-antitoxin system, parDE BB936_19450 PF17912 MalK OB fold domain BB936_19450 PF03459 TOBE domain BB936_19450 PF00005 ABC transporter BB936_19455 PF00528 Binding-protein-dependent transport system inner membrane component BB936_19465 PF13416 Bacterial extracellular solute-binding protein BB936_19475 PF05426 Alginate lyase BB936_19475 PF07940 Heparinase II/III-like protein BB936_19480 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain BB936_19480 PF01276 Orn/Lys/Arg decarboxylase, major domain BB936_19480 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BB936_19485 PF13520 Amino acid permease BB936_19495 PF13508 Acetyltransferase (GNAT) domain BB936_19515 PF03313 Serine dehydratase alpha chain BB936_19525 PF02321 Outer membrane efflux protein BB936_19525 PF08139 Prokaryotic membrane lipoprotein lipid attachment site BB936_19530 PF00296 Luciferase-like monooxygenase BB936_19540 PF03880 DbpA RNA binding domain BB936_19540 PF00271 Helicase conserved C-terminal domain BB936_19540 PF12343 Cold shock protein DEAD box A BB936_19540 PF00270 DEAD/DEAH box helicase BB936_19545 PF07719 Tetratricopeptide repeat BB936_19545 PF13181 Tetratricopeptide repeat BB936_19550 PF00575 S1 RNA binding domain BB936_19550 PF00013 KH domain BB936_19550 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BB936_19550 PF01138 3' exoribonuclease family, domain 1 BB936_19550 PF03725 3' exoribonuclease family, domain 2 BB936_19555 PF00312 Ribosomal protein S15 BB936_19560 PF16198 tRNA pseudouridylate synthase B C-terminal domain BB936_19560 PF09157 Pseudouridine synthase II TruB, C-terminal BB936_19560 PF01509 TruB family pseudouridylate synthase (N terminal domain) BB936_19565 PF02033 Ribosome-binding factor A BB936_19570 PF04760 Translation initiation factor IF-2, N-terminal region BB936_19570 PF08364 Bacterial translation initiation factor IF-2 associated region BB936_19570 PF11987 Translation-initiation factor 2 BB936_19570 PF03144 Elongation factor Tu domain 2 BB936_19570 PF00009 Elongation factor Tu GTP binding domain BB936_19575 PF13184 NusA-like KH domain BB936_19575 PF08529 NusA N-terminal domain BB936_19575 PF00575 S1 RNA binding domain BB936_19580 PF17384 RimP C-terminal SH3 domain BB936_19580 PF02576 RimP N-terminal domain BB936_19595 PF03840 Preprotein translocase SecG subunit BB936_19600 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BB936_19600 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BB936_19600 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BB936_19600 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BB936_19605 PF00809 Pterin binding enzyme BB936_19610 PF17862 AAA+ lid domain BB936_19610 PF06480 FtsH Extracellular BB936_19610 PF00004 ATPase family associated with various cellular activities (AAA) BB936_19610 PF01434 Peptidase family M41 BB936_19615 PF01728 FtsJ-like methyltransferase BB936_19620 PF01985 CRS1 / YhbY (CRM) domain BB936_19625 PF01272 Transcription elongation factor, GreA/GreB, C-term BB936_19625 PF03449 Transcription elongation factor, N-terminal BB936_19630 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family BB936_19635 PF00486 Transcriptional regulatory protein, C terminal BB936_19635 PF00072 Response regulator receiver domain BB936_19640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BB936_19640 PF00672 HAMP domain BB936_19640 PF00512 His Kinase A (phospho-acceptor) domain BB936_19645 PF01926 50S ribosome-binding GTPase BB936_19645 PF01018 GTP1/OBG BB936_19650 PF00892 EamA-like transporter family BB936_19655 PF01016 Ribosomal L27 protein BB936_19660 PF00829 Ribosomal prokaryotic L21 protein BB936_19665 PF00348 Polyprenyl synthetase BB936_19675 PF13693 Winged helix-turn-helix DNA-binding BB936_19680 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BB936_19680 PF00056 lactate/malate dehydrogenase, NAD binding domain BB936_19685 PF01316 Arginine repressor, DNA binding domain BB936_19685 PF02863 Arginine repressor, C-terminal domain BB936_19695 PF02875 Mur ligase family, glutamate ligase domain BB936_19695 PF08245 Mur ligase middle domain BB936_19695 PF01225 Mur ligase family, catalytic domain BB936_19700 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain BB936_19705 PF00672 HAMP domain BB936_19705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BB936_19705 PF02203 Tar ligand binding domain homologue BB936_19710 PF00719 Inorganic pyrophosphatase BB936_19715 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like BB936_19720 PF04357 TamB, inner membrane protein subunit of TAM complex BB936_19725 PF17243 POTRA domain TamA domain 1 BB936_19725 PF07244 Surface antigen variable number repeat BB936_19725 PF01103 Surface antigen BB936_19730 PF01625 Peptide methionine sulfoxide reductase BB936_19735 PF01595 Cyclin M transmembrane N-terminal domain BB936_19735 PF03471 Transporter associated domain BB936_19735 PF00571 CBS domain BB936_19740 PF06526 Protein of unknown function (DUF1107) BB936_19745 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) BB936_19750 PF00459 Inositol monophosphatase family BB936_19755 PF02872 5'-nucleotidase, C-terminal domain BB936_19755 PF00149 Calcineurin-like phosphoesterase BB936_19765 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BB936_19765 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BB936_19770 PF08525 Opacity-associated protein A N-terminal motif BB936_19770 PF04225 Opacity-associated protein A LysM-like domain BB936_19780 PF03948 Ribosomal protein L9, C-terminal domain BB936_19780 PF01281 Ribosomal protein L9, N-terminal domain BB936_19785 PF01084 Ribosomal protein S18 BB936_19790 PF00436 Single-strand binding protein family BB936_19795 PF01250 Ribosomal protein S6 BB936_19805 PF00326 Prolyl oligopeptidase family BB936_19810 PF07338 Protein of unknown function (DUF1471) BB936_19815 PF02770 Acyl-CoA dehydrogenase, middle domain BB936_19815 PF18158 Adaptive response protein AidB N-terminal domain BB936_19815 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BB936_19820 PF02371 Transposase IS116/IS110/IS902 family BB936_19820 PF01548 Transposase BB936_19825 PF08032 RNA 2'-O ribose methyltransferase substrate binding BB936_19825 PF00588 SpoU rRNA Methylase family BB936_19830 PF17876 Cold shock domain BB936_19830 PF08206 Ribonuclease B OB domain BB936_19830 PF08461 Ribonuclease R winged-helix domain BB936_19830 PF00773 RNB domain BB936_19830 PF00575 S1 RNA binding domain BB936_19835 PF02082 Transcriptional regulator BB936_19840 PF00709 Adenylosuccinate synthetase BB936_19845 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) BB936_19850 PF01145 SPFH domain / Band 7 family BB936_19855 PF01145 SPFH domain / Band 7 family BB936_19855 PF12221 Bacterial membrane protein N terminal BB936_19860 PF01926 50S ribosome-binding GTPase BB936_19860 PF13167 GTP-binding GTPase N-terminal BB936_19860 PF16360 GTP-binding GTPase Middle Region BB936_19865 PF17209 Hfq protein BB936_19875 PF01119 DNA mismatch repair protein, C-terminal domain BB936_19875 PF08676 MutL C terminal dimerisation domain BB936_19880 PF01520 N-acetylmuramoyl-L-alanine amidase BB936_19885 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BB936_19890 PF03853 YjeF-related protein N-terminus BB936_19890 PF01256 Carbohydrate kinase BB936_19895 PF08331 Domain of unknown function (DUF1730) BB936_19910 PF00929 Exonuclease BB936_19915 PF03193 RsgA GTPase BB936_19920 PF02666 Phosphatidylserine decarboxylase BB936_19925 PF00924 Mechanosensitive ion channel BB936_19925 PF12795 Mechanosensitive ion channel porin domain BB936_19925 PF12794 Mechanosensitive ion channel inner membrane domain 1 BB936_19930 PF00152 tRNA synthetases class II (D, K and N) BB936_19935 PF02910 Fumarate reductase flavoprotein C-term BB936_19935 PF00890 FAD binding domain BB936_19940 PF13085 2Fe-2S iron-sulfur cluster binding domain BB936_19940 PF13183 4Fe-4S dicluster domain BB936_19945 PF02300 Fumarate reductase subunit C BB936_19950 PF02313 Fumarate reductase subunit D BB936_19955 PF08212 Lipocalin-like domain BB936_19960 PF00893 Small Multidrug Resistance protein BB936_19965 PF08085 Entericidin EcnA/B family BB936_19970 PF09285 Elongation factor P, C-terminal BB936_19970 PF08207 Elongation factor P (EF-P) KOW-like domain BB936_19970 PF01132 Elongation factor P (EF-P) OB domain BB936_19975 PF04055 Radical SAM superfamily BB936_19980 PF13698 Domain of unknown function (DUF4156) BB936_19990 PF00118 TCP-1/cpn60 chaperonin family BB936_19995 PF00166 Chaperonin 10 Kd subunit BB936_20000 PF04186 FxsA cytoplasmic membrane protein BB936_20005 PF10415 Fumarase C C-terminus BB936_20005 PF00206 Lyase BB936_20010 PF03605 Anaerobic c4-dicarboxylate membrane transporter BB936_20015 PF03091 CutA1 divalent ion tolerance protein BB936_20020 PF11412 Disulphide bond corrector protein DsbC BB936_20020 PF02683 Cytochrome C biogenesis protein transmembrane region BB936_20025 PF02595 Glycerate kinase family BB936_20040 PF02901 Pyruvate formate lyase-like BB936_20040 PF01228 Glycine radical BB936_20045 PF00871 Acetokinase family BB936_20050 PF01490 Transmembrane amino acid transporter protein BB936_20055 PF00291 Pyridoxal-phosphate dependent enzyme BB936_20060 PF04055 Radical SAM superfamily BB936_20065 PF06228 Haem utilisation ChuX/HutX BB936_20075 PF10636 Hemin uptake protein hemP BB936_20080 PF00593 TonB dependent receptor BB936_20080 PF07715 TonB-dependent Receptor Plug Domain BB936_20085 PF05171 Haemin-degrading HemS.ChuX domain BB936_20090 PF01497 Periplasmic binding protein BB936_20095 PF01032 FecCD transport family BB936_20100 PF00005 ABC transporter BB936_20130 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system BB936_20140 PF00005 ABC transporter BB936_20140 PF06472 ABC transporter transmembrane region 2 BB936_20145 PF07715 TonB-dependent Receptor Plug Domain BB936_20150 PF16220 Domain of unknown function (DUF4880) BB936_20150 PF04773 FecR protein BB936_20165 PF01206 Sulfurtransferase TusA BB936_20170 PF04143 Sulphur transport BB936_20175 PF01312 FlhB HrpN YscU SpaS Family BB936_20180 PF01311 Bacterial export proteins, family 1 BB936_20185 PF01313 Bacterial export proteins, family 3 BB936_20190 PF00813 FliP family BB936_20195 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BB936_20210 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BB936_20210 PF18269 T3SS EscN ATPase C-terminal domain BB936_20215 PF00771 FHIPEP family BB936_20225 PF07201 HrpJ-like domain BB936_20240 PF01514 Secretory protein of YscJ/FliF family BB936_20260 PF12833 Helix-turn-helix domain BB936_20260 PF14525 AraC-binding-like domain BB936_20285 PF04888 Secretion system effector C (SseC) like family BB936_20330 PF00072 Response regulator receiver domain BB936_20330 PF00196 Bacterial regulatory proteins, luxR family BB936_20335 PF00375 Sodium:dicarboxylate symporter family BB936_20340 PF13193 AMP-binding enzyme C-terminal domain BB936_20340 PF16177 Acetyl-coenzyme A synthetase N-terminus BB936_20340 PF00501 AMP-binding enzyme BB936_20345 PF04341 Protein of unknown function, DUF485 BB936_20350 PF00474 Sodium:solute symporter family BB936_20395 PF02142 MGS-like domain BB936_20395 PF01808 AICARFT/IMPCHase bienzyme BB936_20400 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BB936_20400 PF02844 Phosphoribosylglycinamide synthetase, N domain BB936_20400 PF02843 Phosphoribosylglycinamide synthetase, C domain BB936_20405 PF07356 Protein of unknown function (DUF1481) BB936_20410 PF00216 Bacterial DNA-binding protein BB936_20415 PF04222 Protein of unknown function (DUF416) BB936_20420 PF04493 Endonuclease V BB936_20425 PF01208 Uroporphyrinogen decarboxylase (URO-D) BB936_20430 PF09297 NADH pyrophosphatase zinc ribbon domain BB936_20430 PF00293 NUDIX domain BB936_20435 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ BB936_20440 PF13667 ThiC-associated domain BB936_20440 PF01964 Radical SAM ThiC family BB936_20445 PF02581 Thiamine monophosphate synthase BB936_20450 PF00899 ThiF family BB936_20455 PF02597 ThiS family BB936_20460 PF05690 Thiazole biosynthesis protein ThiG BB936_20465 PF04055 Radical SAM superfamily BB936_20465 PF06968 Biotin and Thiamin Synthesis associated domain BB936_20470 PF02371 Transposase IS116/IS110/IS902 family BB936_20470 PF01548 Transposase BB936_20475 PF04998 RNA polymerase Rpb1, domain 5 BB936_20475 PF05000 RNA polymerase Rpb1, domain 4 BB936_20475 PF04983 RNA polymerase Rpb1, domain 3 BB936_20475 PF00623 RNA polymerase Rpb1, domain 2 BB936_20475 PF04997 RNA polymerase Rpb1, domain 1 BB936_20480 PF04565 RNA polymerase Rpb2, domain 3 BB936_20480 PF00562 RNA polymerase Rpb2, domain 6 BB936_20480 PF04561 RNA polymerase Rpb2, domain 2 BB936_20480 PF04563 RNA polymerase beta subunit BB936_20480 PF10385 RNA polymerase beta subunit external 1 domain BB936_20480 PF04560 RNA polymerase Rpb2, domain 7 BB936_20485 PF16320 Ribosomal protein L7/L12 dimerisation domain BB936_20485 PF00542 Ribosomal protein L7/L12 C-terminal domain BB936_20490 PF00466 Ribosomal protein L10 BB936_20495 PF00687 Ribosomal protein L1p/L10e family BB936_20500 PF03946 Ribosomal protein L11, N-terminal domain BB936_20500 PF00298 Ribosomal protein L11, RNA binding domain BB936_20505 PF02357 Transcription termination factor nusG BB936_20505 PF00467 KOW motif BB936_20510 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BB936_20515 PF00009 Elongation factor Tu GTP binding domain BB936_20515 PF03143 Elongation factor Tu C-terminal domain BB936_20515 PF03144 Elongation factor Tu domain 2 BB936_20545 PF13673 Acetyltransferase (GNAT) domain BB936_20550 PF00485 Phosphoribulokinase / Uridine kinase family BB936_20555 PF08279 HTH domain BB936_20555 PF03099 Biotin/lipoate A/B protein ligase family BB936_20555 PF02237 Biotin protein ligase C terminal domain BB936_20560 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BB936_20560 PF01565 FAD binding domain BB936_20565 PF02371 Transposase IS116/IS110/IS902 family BB936_20565 PF01548 Transposase BB936_20595 PF12724 Flavodoxin domain BB936_20600 PF02386 Cation transport protein BB936_20605 PF09186 Domain of unknown function (DUF1949) BB936_20605 PF01205 Uncharacterized protein family UPF0029 BB936_20610 PF00557 Metallopeptidase family M24 BB936_20615 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BB936_20615 PF00378 Enoyl-CoA hydratase/isomerase BB936_20615 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BB936_20620 PF00108 Thiolase, N-terminal domain BB936_20620 PF02803 Thiolase, C-terminal domain BB936_20625 PF00175 Oxidoreductase NAD-binding domain BB936_20625 PF00970 Oxidoreductase FAD-binding domain BB936_20630 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase BB936_20635 PF02357 Transcription termination factor nusG BB936_20640 PF00490 Delta-aminolevulinic acid dehydratase BB936_20645 PF01026 TatD related DNase BB936_20650 PF00902 Sec-independent protein translocase protein (TatC) BB936_20660 PF02416 mttA/Hcf106 family BB936_20665 PF03109 ABC1 family BB936_20670 PF02036 SCP-2 sterol transfer family BB936_20675 PF01209 ubiE/COQ5 methyltransferase family BB936_20685 PF09335 SNARE associated Golgi protein BB936_20690 PF13722 5TM C-terminal transporter carbon starvation CstA BB936_20690 PF02554 Carbon starvation protein CstA BB936_20700 PF01048 Phosphorylase superfamily BB936_20705 PF01738 Dienelactone hydrolase family BB936_20710 PF01717 Cobalamin-independent synthase, Catalytic domain BB936_20710 PF08267 Cobalamin-independent synthase, N-terminal domain BB936_20715 PF03466 LysR substrate binding domain BB936_20715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BB936_20720 PF00892 EamA-like transporter family BB936_20725 PF03547 Membrane transport protein BB936_20730 PF03009 Glycerophosphoryl diester phosphodiesterase family BB936_20735 PF17912 MalK OB fold domain BB936_20735 PF00005 ABC transporter BB936_20740 PF00528 Binding-protein-dependent transport system inner membrane component BB936_20745 PF00528 Binding-protein-dependent transport system inner membrane component BB936_20750 PF13416 Bacterial extracellular solute-binding protein BB936_20785 PF00005 ABC transporter BB936_20790 PF12399 Branched-chain amino acid ATP-binding cassette transporter BB936_20790 PF00005 ABC transporter BB936_20795 PF11862 Domain of unknown function (DUF3382) BB936_20795 PF02653 Branched-chain amino acid transport system / permease component BB936_20800 PF02653 Branched-chain amino acid transport system / permease component BB936_20805 PF13458 Periplasmic binding protein BB936_20810 PF12568 Acetyltransferase (GNAT) domain, PanZ BB936_20825 PF04542 Sigma-70 region 2 BB936_20825 PF00140 Sigma-70 factor, region 1.2 BB936_20825 PF04545 Sigma-70, region 4 BB936_20830 PF02687 FtsX-like permease family BB936_20830 PF18075 FtsX extracellular domain BB936_20835 PF00005 ABC transporter BB936_20840 PF02881 SRP54-type protein, helical bundle domain BB936_20840 PF00448 SRP54-type protein, GTPase domain BB936_20850 PF06611 Protein of unknown function (DUF1145) BB936_20865 PF07947 YhhN family BB936_20870 PF00403 Heavy-metal-associated domain BB936_20875 PF01206 Sulfurtransferase TusA BB936_20880 PF02592 Putative vitamin uptake transporter BB936_20885 PF08786 DcrB BB936_20890 PF13183 4Fe-4S dicluster domain BB936_20890 PF02754 Cysteine-rich domain BB936_20895 PF00890 FAD binding domain BB936_20900 PF04324 BFD-like [2Fe-2S] binding domain BB936_20900 PF01266 FAD dependent oxidoreductase BB936_20905 PF07690 Major Facilitator Superfamily BB936_20910 PF03009 Glycerophosphoryl diester phosphodiesterase family BB936_20920 PF12146 Serine aminopeptidase, S33 BB936_20925 PF01810 LysE type translocator BB936_20930 PF01810 LysE type translocator BB936_20935 PF16124 RecQ zinc-binding BB936_20935 PF00270 DEAD/DEAH box helicase BB936_20935 PF00271 Helicase conserved C-terminal domain BB936_20935 PF00570 HRDC domain BB936_20935 PF09382 RQC domain BB936_20940 PF02253 Phospholipase A1 BB936_20945 PF03061 Thioesterase superfamily BB936_20950 PF00892 EamA-like transporter family BB936_20955 PF01544 CorA-like Mg2+ transporter protein BB936_20960 PF09370 Phosphoenolpyruvate hydrolase-like BB936_20975 PF00580 UvrD/REP helicase N-terminal domain BB936_20975 PF13361 UvrD-like helicase C-terminal domain BB936_20980 PF13419 Haloacid dehalogenase-like hydrolase BB936_20985 PF02899 Phage integrase, N-terminal SAM-like domain BB936_20985 PF00589 Phage integrase family BB936_20990 PF04340 Protein of unknown function, DUF484 BB936_20995 PF01678 Diaminopimelate epimerase BB936_21000 PF13627 Prokaryotic lipoprotein-attachment site BB936_21005 PF01491 Frataxin-like domain BB936_21015 PF01295 Adenylate cyclase, class-I BB936_21015 PF12633 Adenylate cyclase NT domain BB936_21020 PF03900 Porphobilinogen deaminase, C-terminal domain BB936_21020 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BB936_21025 PF02602 Uroporphyrinogen-III synthase HemD BB936_21030 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase BB936_21035 PF07219 HemY protein N-terminus BB936_21035 PF07719 Tetratricopeptide repeat BB936_21040 PF01548 Transposase BB936_21040 PF02371 Transposase IS116/IS110/IS902 family BB936_21070 PF03808 Glycosyl transferase WecB/TagA/CpsF family BB936_21075 PF06899 WzyE protein, O-antigen assembly polymerase BB936_21080 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 BB936_21085 PF01943 Polysaccharide biosynthesis protein BB936_21090 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BB936_21100 PF00483 Nucleotidyl transferase BB936_21105 PF16363 GDP-mannose 4,6 dehydratase BB936_21110 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BB936_21110 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BB936_21110 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BB936_21115 PF02350 UDP-N-acetylglucosamine 2-epimerase BB936_21120 PF02706 Chain length determinant protein BB936_21125 PF00953 Glycosyl transferase family 4 BB936_21130 PF02371 Transposase IS116/IS110/IS902 family BB936_21130 PF01548 Transposase BB936_21135 PF07497 Rho termination factor, RNA-binding domain BB936_21135 PF07498 Rho termination factor, N-terminal domain BB936_21135 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BB936_21140 PF00085 Thioredoxin BB936_21145 PF00270 DEAD/DEAH box helicase BB936_21145 PF00271 Helicase conserved C-terminal domain BB936_21150 PF02541 Ppx/GppA phosphatase family BB936_21155 PF00295 Glycosyl hydrolases family 28 BB936_21160 PF00580 UvrD/REP helicase N-terminal domain BB936_21160 PF13361 UvrD-like helicase C-terminal domain BB936_21175 PF13358 DDE superfamily endonuclease BB936_21175 PF13592 Winged helix-turn helix BB936_21185 PF03458 UPF0126 domain BB936_21195 PF00625 Guanylate kinase BB936_21200 PF01192 RNA polymerase Rpb6 BB936_21205 PF04607 Region found in RelA / SpoT proteins BB936_21205 PF13291 ACT domain BB936_21205 PF02824 TGS domain BB936_21210 PF12105 SpoU, rRNA methylase, C-terminal BB936_21210 PF00588 SpoU rRNA Methylase family BB936_21215 PF00271 Helicase conserved C-terminal domain BB936_21215 PF17191 RecG wedge domain BB936_21215 PF00270 DEAD/DEAH box helicase BB936_21220 PF02371 Transposase IS116/IS110/IS902 family BB936_21220 PF01548 Transposase BB936_21225 PF03616 Sodium/glutamate symporter BB936_21230 PF00860 Permease family BB936_21235 PF05170 AsmA family BB936_21250 PF13693 Winged helix-turn-helix DNA-binding BB936_21255 PF00583 Acetyltransferase (GNAT) family BB936_21255 PF09500 Putative thioesterase (yiiD_Cterm) BB936_21260 PF02580 D-Tyr-tRNA(Tyr) deacylase BB936_21265 PF03631 Virulence factor BrkB BB936_21270 PF13419 Haloacid dehalogenase-like hydrolase BB936_21280 PF03951 Glutamine synthetase, beta-Grasp domain BB936_21280 PF00120 Glutamine synthetase, catalytic domain BB936_21290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BB936_21290 PF00989 PAS fold BB936_21290 PF00512 His Kinase A (phospho-acceptor) domain BB936_21295 PF00072 Response regulator receiver domain BB936_21295 PF00158 Sigma-54 interaction domain BB936_21295 PF02954 Bacterial regulatory protein, Fis family BB936_21300 PF06969 HemN C-terminal domain BB936_21300 PF04055 Radical SAM superfamily BB936_21305 PF04220 Der GTPase activator (YihI) BB936_21310 PF01926 50S ribosome-binding GTPase BB936_21315 PF00476 DNA polymerase family A BB936_21315 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BB936_21315 PF01612 3'-5' exonuclease BB936_21315 PF01367 5'-3' exonuclease, C-terminal SAM fold BB936_21320 PF01323 DSBA-like thioredoxin domain BB936_21325 PF01636 Phosphotransferase enzyme family BB936_21330 PF06288 Protein of unknown function (DUF1040) BB936_21335 PF12804 MobA-like NTP transferase domain BB936_21340 PF03205 Molybdopterin guanine dinucleotide synthesis protein B BB936_21345 PF13276 HTH-like domain BB936_21345 PF13333 Integrase core domain BB936_21345 PF00665 Integrase core domain BB936_21375 PF07729 FCD domain BB936_21375 PF00392 Bacterial regulatory proteins, gntR family BB936_21380 PF07690 Major Facilitator Superfamily BB936_21385 PF00356 Bacterial regulatory proteins, lacI family BB936_21390 PF00294 pfkB family carbohydrate kinase BB936_21395 PF13407 Periplasmic binding protein domain BB936_21400 PF02653 Branched-chain amino acid transport system / permease component BB936_21405 PF00005 ABC transporter BB936_21410 PF05025 RbsD / FucU transport protein family BB936_21415 PF02705 K+ potassium transporter BB936_21420 PF12592 Protein of unknown function (DUF3763) BB936_21420 PF07728 AAA domain (dynein-related subfamily) BB936_21420 PF17868 AAA lid domain BB936_21425 PF05762 VWA domain containing CoxE-like protein BB936_21435 PF03590 Aspartate-ammonia ligase BB936_21440 PF01037 Lrp/AsnC ligand binding domain BB936_21445 PF00258 Flavodoxin BB936_21450 PF13932 GidA associated domain BB936_21450 PF01134 Glucose inhibited division protein A BB936_21455 PF02527 rRNA small subunit methyltransferase G BB936_21460 PF03899 ATP synthase I chain BB936_21465 PF00119 ATP synthase A chain BB936_21470 PF00137 ATP synthase subunit C BB936_21475 PF00430 ATP synthase B/B' CF(0) BB936_21480 PF00213 ATP synthase delta (OSCP) subunit BB936_21485 PF00306 ATP synthase alpha/beta chain, C terminal domain BB936_21485 PF02874 ATP synthase alpha/beta family, beta-barrel domain BB936_21485 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BB936_21490 PF00231 ATP synthase BB936_21495 PF02874 ATP synthase alpha/beta family, beta-barrel domain BB936_21495 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BB936_21500 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BB936_21500 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain BB936_21505 PF00132 Bacterial transferase hexapeptide (six repeats) BB936_21505 PF12804 MobA-like NTP transferase domain BB936_21510 PF01380 SIS domain BB936_21515 PF12849 PBP superfamily domain BB936_21520 PF00528 Binding-protein-dependent transport system inner membrane component BB936_21525 PF00528 Binding-protein-dependent transport system inner membrane component BB936_21530 PF00005 ABC transporter BB936_21535 PF01895 PhoU domain BB936_21545 PF00497 Bacterial extracellular solute-binding proteins, family 3 BB936_21550 PF00528 Binding-protein-dependent transport system inner membrane component BB936_21555 PF00528 Binding-protein-dependent transport system inner membrane component BB936_21565 PF00860 Permease family BB936_21575 PF00196 Bacterial regulatory proteins, luxR family BB936_21575 PF00072 Response regulator receiver domain BB936_21580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BB936_21580 PF00512 His Kinase A (phospho-acceptor) domain BB936_21585 PF03358 NADPH-dependent FMN reductase BB936_21590 PF02203 Tar ligand binding domain homologue BB936_21590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BB936_21590 PF00672 HAMP domain BB936_21595 PF00528 Binding-protein-dependent transport system inner membrane component BB936_21600 PF09383 NIL domain BB936_21600 PF00005 ABC transporter BB936_21610 PF12241 Trans-2-enoyl-CoA reductase catalytic region BB936_21610 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase BB936_21610 PF07055 Enoyl reductase FAD binding domain BB936_21615 PF10396 GTP-binding protein TrmE N-terminus BB936_21615 PF12631 MnmE helical domain BB936_21615 PF01926 50S ribosome-binding GTPase BB936_21620 PF14849 YidC periplasmic domain BB936_21620 PF02096 60Kd inner membrane protein BB936_21625 PF01809 Putative membrane protein insertion efficiency factor BB936_21630 PF00825 Ribonuclease P BB936_21635 PF00468 Ribosomal protein L34 BB936_21675 PF00589 Phage integrase family BB936_21715 PF07057 DNA helicase TraI BB936_21715 PF18272 single-stranded DNA binding TraI N-terminal subdomain BB936_21715 PF18340 DNA relaxase TraI 2B/2B-like domain BB936_21715 PF08751 TrwC relaxase BB936_21830 PF14319 Transposase zinc-binding domain BB936_21830 PF04986 Putative transposase BB936_21915 PF06834 TraU protein BB936_21940 PF06122 Conjugative relaxosome accessory transposon protein BB936_21990 PF01548 Transposase BB936_21990 PF02371 Transposase IS116/IS110/IS902 family BB936_22010 PF00589 Phage integrase family BB936_22015 PF02796 Helix-turn-helix domain of resolvase BB936_22015 PF00239 Resolvase, N terminal domain BB936_22020 PF03797 Autotransporter beta-domain BB936_22020 PF03212 Pertactin BB936_22020 PF13018 Extended Signal Peptide of Type V secretion system BB936_22020 PF16168 Adhesin of bacterial autotransporter system, probable stalk BB936_22025 PF17287 POTRA domain BB936_22025 PF08479 POTRA domain, ShlB-type BB936_22025 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB BB936_22030 PF04829 Pre-toxin domain with VENN motif BB936_22030 PF05860 haemagglutination activity domain BB936_22030 PF13018 Extended Signal Peptide of Type V secretion system BB936_22030 PF13332 Hemagglutinin repeat BB936_22080 PF01527 Transposase BB936_22165 PF11924 Inverse autotransporter, beta-domain BB936_22165 PF09134 Invasin, domain 3 BB936_22165 PF02369 Bacterial Ig-like domain (group 1) BB936_22195 PF00589 Phage integrase family BB936_22270 PF00872 Transposase, Mutator family BB936_22280 PF12468 Type III secretion system leucine rich repeat protein BB936_22280 PF12468 Type III secretion system leucine rich repeat protein BB936_22300 PF05932 Tir chaperone protein (CesT) family BB936_22305 PF03543 Yersinia/Haemophilus virulence surface antigen BB936_22320 PF05818 Enterobacterial TraT complement resistance protein BB936_22345 PF01527 Transposase BB936_22350 PF00665 Integrase core domain BB936_22355 PF13700 Domain of unknown function (DUF4158) BB936_22355 PF01526 Tn3 transposase DDE domain BB936_22360 PF13700 Domain of unknown function (DUF4158) BB936_22360 PF01526 Tn3 transposase DDE domain BB936_22380 PF02387 IncFII RepA protein family BB936_22385 PF10723 Replication regulatory protein RepB BB936_22400 PF05857 TraX protein BB936_22410 PF01527 Transposase BB936_22420 PF08751 TrwC relaxase BB936_22420 PF18340 DNA relaxase TraI 2B/2B-like domain BB936_22420 PF07057 DNA helicase TraI BB936_22420 PF18272 single-stranded DNA binding TraI N-terminal subdomain BB936_22435 PF03358 NADPH-dependent FMN reductase BB936_22440 PF01022 Bacterial regulatory protein, arsR family BB936_22445 PF02040 Arsenical pump membrane protein BB936_22450 PF03960 ArsC family BB936_22455 PF00239 Resolvase, N terminal domain BB936_22455 PF02796 Helix-turn-helix domain of resolvase BB936_22460 PF13700 Domain of unknown function (DUF4158) BB936_22460 PF01526 Tn3 transposase DDE domain BB936_22460 PF01526 Tn3 transposase DDE domain BB936_22460 PF13700 Domain of unknown function (DUF4158) BB936_22470 PF00892 EamA-like transporter family BB936_22475 PF03895 YadA-like membrane anchor domain BB936_22475 PF05658 Head domain of trimeric autotransporter adhesin BB936_22475 PF05662 Coiled stalk of trimeric autotransporter adhesin BB936_22520 PF13614 AAA domain BB936_22525 PF02195 ParB-like nuclease domain BB936_22525 PF18090 Centromere-binding protein HTH domain BB936_22530 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH BB936_22540 PF03545 Yersinia virulence determinant (YopE) BB936_22540 PF09020 YopE, N terminal BB936_22545 PF05932 Tir chaperone protein (CesT) family BB936_22550 PF01527 Transposase BB936_22565 PF00102 Protein-tyrosine phosphatase BB936_22565 PF09013 YopH, N-terminal BB936_22570 PF09013 YopH, N-terminal BB936_22575 PF02108 Flagellar assembly protein FliH BB936_22580 PF06578 YOP proteins translocation protein K (YscK) BB936_22585 PF01514 Secretory protein of YscJ/FliF family BB936_22590 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI BB936_22595 PF09025 YopR, type III needle-polymerisation regulator BB936_22600 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) BB936_22605 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF BB936_22610 PF08988 Type III secretion system, cytoplasmic E component of needle BB936_22615 PF16697 Inner membrane component of T3SS, cytoplasmic domain BB936_22615 PF16693 Inner membrane component of T3SS, periplasmic domain BB936_22625 PF05932 Tir chaperone protein (CesT) family BB936_22630 PF17551 Family of unknown function (DUF5463) BB936_22635 PF12833 Helix-turn-helix domain BB936_22645 PF01312 FlhB HrpN YscU SpaS Family BB936_22650 PF01311 Bacterial export proteins, family 1 BB936_22655 PF01313 Bacterial export proteins, family 3 BB936_22660 PF00813 FliP family BB936_22670 PF02120 Flagellar hook-length control protein FliK BB936_22675 PF07321 Type III secretion protein YscO BB936_22680 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BB936_22680 PF02874 ATP synthase alpha/beta family, beta-barrel domain BB936_22680 PF18269 T3SS EscN ATPase C-terminal domain BB936_22685 PF07201 HrpJ-like domain BB936_22690 PF09059 TyeA BB936_22700 PF09474 Type III secretion system YscX (type_III_YscX) BB936_22710 PF00771 FHIPEP family BB936_22715 PF09621 Type III secretion system regulator (LcrR) BB936_22720 PF07216 LcrG protein BB936_22725 PF04792 V antigen (LcrV) protein BB936_22730 PF07720 Tetratricopeptide repeat BB936_22735 PF04888 Secretion system effector C (SseC) like family