BED35_00020 IPR009241 Addiction module killer protein BED35_00025 IPR001387 Cro/C1-type helix-turn-helix domain BED35_00025 IPR010982 Lambda repressor-like, DNA-binding domain BED35_00045 IPR019476 Type IV secretion system, TraD, DNA-binding domain BED35_00045 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_00050 IPR014059 Conjugative relaxase, N-terminal BED35_00050 IPR014862 TrwC relaxase BED35_00050 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_00055 IPR007560 Restriction endonuclease type IV, Mrr BED35_00055 IPR011335 Restriction endonuclease type II-like BED35_00070 IPR008258 Lytic transglycosylase-like SLT domain BED35_00070 IPR023346 Lysozyme-like domain BED35_00080 IPR001801 Histone-like protein H-NS BED35_00090 IPR002104 Integrase, catalytic BED35_00090 IPR011010 DNA breaking-rejoining enzyme, catalytic core BED35_00090 IPR013762 Integrase-like, catalytic core BED35_00090 IPR016423 Resolvase, Rsv BED35_00095 IPR025285 Domain of unknown function DUF4145 BED35_00110 IPR011008 Dimeric alpha-beta barrel BED35_00110 IPR013097 Stress responsive alpha-beta barrel BED35_00120 IPR024519 Domain of unknown function DUF3442, intimin/invasin BED35_00120 IPR036779 BED35_00120 BED35_00120 IPR038177 BED35_00120 BED35_00125 IPR003535 Intimin/invasin bacterial adhesion mediator protein BED35_00125 IPR024519 Domain of unknown function DUF3442, intimin/invasin BED35_00125 IPR038177 BED35_00125 BED35_00130 IPR003344 Bacterial Ig-like, group 1 BED35_00130 IPR008964 Invasin/intimin cell-adhesion BED35_00130 IPR013783 Immunoglobulin-like fold BED35_00130 IPR015217 Invasin, domain 3 BED35_00140 IPR009057 Homeodomain-like BED35_00140 IPR011256 Regulatory factor, effector binding domain BED35_00145 IPR020357 Transcription regulator CaiF BED35_00145 IPR036388 BED35_00145 BED35_00165 IPR008964 Invasin/intimin cell-adhesion BED35_00165 IPR013783 Immunoglobulin-like fold BED35_00190 IPR020357 Transcription regulator CaiF BED35_00190 IPR036388 BED35_00190 BED35_00205 IPR008964 Invasin/intimin cell-adhesion BED35_00205 IPR013783 Immunoglobulin-like fold BED35_00210 IPR022385 Rhs repeat-associated core BED35_00210 IPR031325 BED35_00210 BED35_00215 IPR002514 Transposase IS3/IS911family BED35_00215 IPR009057 Homeodomain-like BED35_00235 IPR015223 ATPase MipZ/NubP2/Cfd1 BED35_00235 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_00240 IPR009057 Homeodomain-like BED35_00240 IPR025246 Transposase IS30-like HTH domain BED35_00265 IPR008638 Filamentous haemagglutinin, N-terminal BED35_00265 IPR011050 Pectin lyase fold/virulence factor BED35_00265 IPR012334 Pectin lyase fold BED35_00265 IPR024973 ESPR domain BED35_00270 IPR005565 Haemolysin activator HlyB BED35_00270 IPR013686 Polypeptide-transport-associated, ShlB-type BED35_00270 IPR027282 Two partner secretion pathway transporter BED35_00270 IPR035251 BED35_00270 BED35_00275 IPR003991 Pertactin virulence factor family BED35_00275 IPR004899 Pertactin, central region BED35_00275 IPR005546 Autotransporter beta-domain BED35_00275 IPR006315 Outer membrane autotransporter barrel BED35_00275 IPR011050 Pectin lyase fold/virulence factor BED35_00275 IPR012332 P22 tailspike C-terminal domain-like BED35_00275 IPR030930 BED35_00275 BED35_00275 IPR036709 BED35_00275 BED35_00280 IPR006118 Recombinase, conserved site BED35_00280 IPR006119 Resolvase, N-terminal BED35_00280 IPR036162 BED35_00280 BED35_00285 IPR002104 Integrase, catalytic BED35_00285 IPR011010 DNA breaking-rejoining enzyme, catalytic core BED35_00285 IPR013762 Integrase-like, catalytic core BED35_00285 IPR016423 Resolvase, Rsv BED35_00290 IPR010985 Ribbon-helix-helix BED35_00295 IPR012931 TraG-like, N-terminal BED35_00295 IPR026866 Uncharacterised chromosomal cassette SCCmec type IVc protein CR006 BED35_00300 IPR010927 Type IV conjugative transfer system protein TraH BED35_00305 IPR036249 BED35_00305 BED35_00305 IPR039555 BED35_00305 BED35_00310 IPR013229 PEGA BED35_00315 IPR019533 Peptidase S26 BED35_00315 IPR036286 BED35_00315 BED35_00320 IPR019106 Type-F conjugative transfer system pilin assembly protein TrbC BED35_00325 IPR009649 TraU BED35_00330 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN BED35_00340 IPR002789 Domain of unknown function DUF87 BED35_00340 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase BED35_00340 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_00345 IPR014118 Type IV conjugative transfer system protein TraV BED35_00350 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI BED35_00355 IPR010563 Pilus assembly TraK BED35_00360 IPR007973 Pilus assembly TraE BED35_00375 IPR009094 Disulphide bond isomerase, DsbC, N-terminal BED35_00375 IPR012336 Thioredoxin-like fold BED35_00375 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal BED35_00375 IPR036249 BED35_00375 BED35_00410 IPR007069 Transposase, IS801/IS1294 BED35_00410 IPR026889 Transposase zinc-binding domain BED35_00415 IPR025669 AAA domain BED35_00415 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_00420 IPR013741 Transcriptional repressor protein KorB BED35_00480 IPR006972 Secretion system effector C, SseC-like BED35_00485 IPR008898 YopD-like BED35_00490 IPR001207 Transposase, mutator type BED35_00500 IPR032674 BED35_00500 BED35_00500 IPR032675 BED35_00500 BED35_00515 IPR001584 Integrase, catalytic core BED35_00515 IPR012337 Ribonuclease H-like domain BED35_00515 IPR025948 HTH-like domain BED35_00515 IPR036397 BED35_00515 BED35_00520 IPR010261 Tir chaperone protein (CesT) family BED35_00525 IPR003951 Peptidase C58, Yersinia/Haemophilus virulence surface antigen BED35_00525 IPR006473 Peptidase C58, YopT-type domain BED35_00525 IPR038765 BED35_00525 BED35_00530 IPR016505 Type III secretion system YopQ BED35_00540 IPR008874 Enterobacterial TraT complement resistance BED35_00545 IPR005083 Serine/Threonine acetyltransferase, YopJ BED35_00565 IPR002514 Transposase IS3/IS911family BED35_00565 IPR009057 Homeodomain-like BED35_00570 IPR001584 Integrase, catalytic core BED35_00570 IPR012337 Ribonuclease H-like domain BED35_00575 IPR002513 Tn3 transposase DDE domain BED35_00595 IPR003446 Plasmid replication initiation, RepA BED35_00595 IPR017837 Plasmid replication initiator, RepA, IncFII type BED35_00600 IPR019661 Replication regulatory protein RepA2 BED35_00605 IPR001736 Phospholipase D/Transphosphatidylase BED35_00605 IPR025202 Phospholipase D-like domain BED35_00610 IPR001584 Integrase, catalytic core BED35_00610 IPR012337 Ribonuclease H-like domain BED35_00610 IPR025948 HTH-like domain BED35_00610 IPR036397 BED35_00610 BED35_00615 IPR009767 DNA helicase, TraI type BED35_00630 IPR005025 NADPH-dependent FMN reductase-like BED35_00630 IPR014063 Arsenate resistance ArsH BED35_00630 IPR029039 Flavoprotein-like BED35_00635 IPR001845 HTH ArsR-type DNA-binding domain BED35_00635 IPR018334 ArsR-type transcription regulator, HTH motif BED35_00635 IPR036388 BED35_00635 BED35_00635 IPR036390 BED35_00635 BED35_00640 IPR000802 Arsenical pump membrane protein, ArsB BED35_00645 IPR006659 Arsenate reductase BED35_00645 IPR006660 Arsenate reductase-like BED35_00645 IPR036249 BED35_00645 BED35_00650 IPR006118 Recombinase, conserved site BED35_00650 IPR006119 Resolvase, N-terminal BED35_00650 IPR006120 Resolvase, HTH domain BED35_00650 IPR009057 Homeodomain-like BED35_00650 IPR036162 BED35_00650 BED35_00655 IPR002513 Tn3 transposase DDE domain BED35_00655 IPR025296 Domain of unknown function DUF4158 BED35_00660 IPR000792 Transcription regulator LuxR, C-terminal BED35_00660 IPR016032 Signal transduction response regulator, C-terminal effector BED35_00660 IPR036388 BED35_00660 BED35_00665 IPR000620 Drug/metabolite transporter BED35_00670 IPR005594 YadA-like, C-terminal BED35_00670 IPR008126 Outer membrane adhesion, Yersinia BED35_00675 IPR001584 Integrase, catalytic core BED35_00675 IPR012337 Ribonuclease H-like domain BED35_00675 IPR036397 BED35_00675 BED35_00685 IPR015103 Protein-tyrosine phosphatase, YopH, N-terminal BED35_00685 IPR036484 BED35_00685 BED35_00690 IPR001584 Integrase, catalytic core BED35_00690 IPR012337 Ribonuclease H-like domain BED35_00695 IPR001584 Integrase, catalytic core BED35_00695 IPR012337 Ribonuclease H-like domain BED35_00695 IPR025948 HTH-like domain BED35_00695 IPR036397 BED35_00695 BED35_00700 IPR001584 Integrase, catalytic core BED35_00700 IPR012337 Ribonuclease H-like domain BED35_00700 IPR025948 HTH-like domain BED35_00700 IPR036397 BED35_00700 BED35_00720 IPR000551 MerR-type HTH domain BED35_00720 IPR009061 DNA binding domain, putative BED35_00720 IPR025669 AAA domain BED35_00720 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_00725 IPR003115 ParB/Sulfiredoxin BED35_00725 IPR004437 ParB/RepB/Spo0J partition protein family BED35_00725 IPR036086 BED35_00725 BED35_00730 IPR010985 Ribbon-helix-helix BED35_00730 IPR022789 Uncharacterised protein family UPF0156/MetJ /Arc repressor BED35_00730 IPR038296 BED35_00730 BED35_00735 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family BED35_00735 IPR028344 Toxin-antitoxin system, toxin component ParE1/4 BED35_00735 IPR035093 BED35_00735 BED35_00740 IPR003537 Yersinia virulence determinant YopE BED35_00740 IPR014773 Virulence factor YopE uncharacterised domain BED35_00740 IPR015110 YopE, N-terminal domain BED35_00740 IPR037168 BED35_00740 BED35_00745 IPR005416 Type III secretion chaperone SycE BED35_00745 IPR010261 Tir chaperone protein (CesT) family BED35_00750 IPR009057 Homeodomain-like BED35_00760 IPR010261 Tir chaperone protein (CesT) family BED35_00765 IPR000242 Protein-tyrosine phosphatase, receptor/non-receptor type BED35_00765 IPR003546 Type III secreted modular tyrosine phosphatase, SptP/YopH BED35_00765 IPR003595 Protein-tyrosine phosphatase, catalytic BED35_00765 IPR015103 Protein-tyrosine phosphatase, YopH, N-terminal BED35_00765 IPR016130 Protein-tyrosine phosphatase, active site BED35_00765 IPR029021 Protein-tyrosine phosphatase-like BED35_00765 IPR036484 BED35_00765 BED35_00770 IPR015103 Protein-tyrosine phosphatase, YopH, N-terminal BED35_00770 IPR036484 BED35_00770 BED35_00775 IPR012842 Type III secretion system HrpE/YscL BED35_00775 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE BED35_00780 IPR009510 Type III secretion system, secretion protein K BED35_00785 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ BED35_00785 IPR006182 Secretory protein YscJ/FliF BED35_00790 IPR012670 Type III secretion system, YscI/HrpB BED35_00795 IPR013349 Type III secretion system effector YopR BED35_00800 IPR011990 Tetratricopeptide-like helical domain BED35_00800 IPR013348 Type III secretion system YscG BED35_00805 IPR011841 Type III secretion system, needle protein BED35_00805 IPR021123 Type III secretion, needle-protein-like BED35_00805 IPR037203 BED35_00805 BED35_00810 IPR012671 Type III secretion system, secretion protein E BED35_00815 IPR012843 Type III secretion system YscD/HrpQ BED35_00815 IPR032034 BED35_00815 BED35_00820 IPR003522 Type III secretion system outer membrane pore YscC/HrcC BED35_00820 IPR004845 Type II secretion system GspD, conserved site BED35_00820 IPR004846 Type II/III secretion system BED35_00820 IPR005644 NolW-like BED35_00820 IPR038591 BED35_00820 BED35_00825 IPR010261 Tir chaperone protein (CesT) family BED35_00825 IPR013353 Type III secretion system chaperone YscB BED35_00830 IPR035181 BED35_00830 BED35_00835 IPR009057 Homeodomain-like BED35_00835 IPR018060 DNA binding HTH domain, AraC-type BED35_00835 IPR018062 HTH domain AraC-type, conserved site BED35_00835 IPR020449 Transcription regulator HTH, AraC- type BED35_00835 IPR037923 BED35_00835 BED35_00840 IPR013400 Type III secretion system chaperone, YscW BED35_00840 IPR039366 BED35_00840 BED35_00845 IPR006135 Type III secretion system substrate exporter BED35_00845 IPR006307 Type III exporter system, secretion apparatus protein BsaZ BED35_00845 IPR029025 Type III secretion system substrate exporter, C-terminal BED35_00850 IPR002010 Type III secretion system inner membrane R protein BED35_00850 IPR006304 Type III secretion protein SpaR/YscT BED35_00855 IPR002191 Bacterial export protein family 3 BED35_00855 IPR006306 Type III secretion protein HrpO BED35_00865 IPR001543 Surface presentation of antigen (SpoA) BED35_00865 IPR003283 Type III secretion system outer membrane, SpaO BED35_00865 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO BED35_00865 IPR036429 BED35_00865 BED35_00870 IPR013354 Type III secretion system needle length determinant, C-terminal domain BED35_00870 IPR021136 Flagellar hook-length control protein-like, C-terminal BED35_00875 IPR009929 Type III secretion sytem,YscO BED35_00885 IPR010812 Hypersensitivity response secretion-like, HrpJ BED35_00885 IPR013401 Type III secretion regulator, YopN/LcrE/InvE/MxiC BED35_00890 IPR013351 Type III secretion system effector delivery regulator TyeA-related BED35_00890 IPR015144 Type III secretion system effector delivery regulator TyeA BED35_00890 IPR038347 BED35_00890 BED35_00895 IPR012673 Type III secretion system chaperone SycN BED35_00900 IPR012672 Type III secretion system YscX BED35_00905 IPR011990 Tetratricopeptide-like helical domain BED35_00905 IPR016684 Type III secretion system chaperone, YscY BED35_00915 IPR013405 Type III secretion system regulator, LcrR BED35_00915 IPR022797 Type III secretion system regulator LcrR/Chaperone CesD2 BED35_00920 IPR009863 Type III secretion protein, LcrG BED35_00925 IPR005413 Low calcium response V antigen BED35_00925 IPR036139 BED35_00925 BED35_00930 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD BED35_00930 IPR011716 Tetratricopeptide TPR-3 BED35_00930 IPR011990 Tetratricopeptide-like helical domain BED35_00930 IPR016379 Type III secretion system, low calcium response, chaperone LcrH/SycD, subgroup BED35_00935 IPR001957 Chromosomal replication control, initiator DnaA BED35_00935 IPR003593 AAA+ ATPase domain BED35_00935 IPR010921 Trp repressor/replication initiator BED35_00935 IPR013159 Chromosomal replication initiator, DnaA C-terminal BED35_00935 IPR013317 Chromosomal replication control, initiator (DnaA)/regulator (Hda) BED35_00935 IPR018312 Chromosomal replication control, initiator DnaA, conserved site BED35_00935 IPR020591 Chromosomal replication control, initiator DnaA-like BED35_00935 IPR024633 DnaA N-terminal domain BED35_00935 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_00935 IPR038454 BED35_00935 BED35_00940 IPR001001 DNA polymerase III, beta chain BED35_00940 IPR022634 DNA polymerase III, beta chain, N-terminal BED35_00940 IPR022635 DNA polymerase III, beta chain, C-terminal BED35_00940 IPR022637 DNA polymerase III, beta chain, central BED35_00945 IPR001238 DNA-binding, RecF BED35_00945 IPR003395 RecF/RecN/SMC, N-terminal BED35_00945 IPR018078 DNA-binding, RecF, conserved site BED35_00945 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_00950 IPR000565 DNA topoisomerase, type IIA, subunit B BED35_00950 IPR001241 DNA topoisomerase, type IIA BED35_00950 IPR002288 DNA gyrase B subunit, C-terminal BED35_00950 IPR003594 Histidine kinase-like ATPase, C-terminal domain BED35_00950 IPR006171 Toprim domain BED35_00950 IPR011557 DNA gyrase, subunit B BED35_00950 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 BED35_00950 IPR013759 DNA topoisomerase, type IIA, central domain BED35_00950 IPR013760 DNA topoisomerase, type IIA-like domain BED35_00950 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BED35_00950 IPR018522 DNA topoisomerase, type IIA, conserved site BED35_00950 IPR020568 Ribosomal protein S5 domain 2-type fold BED35_00950 IPR036890 BED35_00950 BED35_00955 IPR000150 Cof protein BED35_00955 IPR006379 HAD-superfamily hydrolase, subfamily IIB BED35_00955 IPR023214 HAD-like domain BED35_00955 IPR036412 BED35_00955 BED35_00960 IPR003462 Ornithine cyclodeaminase/mu-crystallin BED35_00960 IPR023401 Ornithine cyclodeaminase, N-terminal BED35_00960 IPR036291 BED35_00960 BED35_00965 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site BED35_00965 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme BED35_00965 IPR036052 BED35_00965 BED35_00970 IPR011042 Six-bladed beta-propeller, TolB-like BED35_00970 IPR011659 WD40-like Beta Propeller BED35_00970 IPR022223 Protein of unknown function DUF3748 BED35_00975 IPR010780 Protein of unknown function DUF1375 BED35_00980 IPR002068 Alpha crystallin/Hsp20 domain BED35_00980 IPR008978 HSP20-like chaperone BED35_00980 IPR023728 Small heat shock protein IbpA BED35_00985 IPR002068 Alpha crystallin/Hsp20 domain BED35_00985 IPR008978 HSP20-like chaperone BED35_00985 IPR022848 Small heat shock protein IbpB BED35_00990 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED35_00990 IPR003346 Transposase, IS116/IS110/IS902 BED35_01000 IPR000577 BED35_01000 BED35_01000 IPR005999 Glycerol kinase BED35_01000 IPR018483 Carbohydrate kinase, FGGY, conserved site BED35_01000 IPR018484 Carbohydrate kinase, FGGY, N-terminal BED35_01000 IPR018485 Carbohydrate kinase, FGGY, C-terminal BED35_01005 IPR000425 Major intrinsic protein BED35_01005 IPR022357 Major intrinsic protein, conserved site BED35_01005 IPR023271 Aquaporin-like BED35_01015 IPR009252 Cell division protein ZapB BED35_01020 IPR005493 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase BED35_01020 IPR010203 Regulator of ribonuclease activity A BED35_01020 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria BED35_01020 IPR036704 BED35_01020 BED35_01025 IPR000537 UbiA prenyltransferase family BED35_01025 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase BED35_01025 IPR026046 UbiA prenyltransferase domain containing protein 1 BED35_01030 IPR003593 AAA+ ATPase domain BED35_01030 IPR003959 ATPase, AAA-type, core BED35_01030 IPR004491 Heat shock protein HslU BED35_01030 IPR019489 Clp ATPase, C-terminal BED35_01030 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_01035 IPR001353 Proteasome, subunit alpha/beta BED35_01035 IPR022281 ATP-dependent protease, HslV subunit BED35_01035 IPR029055 Nucleophile aminohydrolases, N-terminal BED35_01040 IPR007730 Sporulation-related domain BED35_01040 IPR011930 Cell division protein FtsN BED35_01040 IPR036680 BED35_01040 BED35_01045 IPR000843 Transcription regulator HTH, LacI BED35_01045 IPR010982 Lambda repressor-like, DNA-binding domain BED35_01045 IPR028082 Periplasmic binding protein-like I BED35_01050 IPR001650 Helicase, C-terminal BED35_01050 IPR005259 Primosomal protein n BED35_01050 IPR011545 DEAD/DEAH box helicase domain BED35_01050 IPR014001 Helicase, superfamily 1/2, ATP-binding domain BED35_01050 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_01055 IPR002150 Ribosomal protein L31 BED35_01055 IPR027491 Ribosomal protein L31 type A BED35_01055 IPR034704 BED35_01055 BED35_01060 IPR002084 Methionine repressor MetJ BED35_01060 IPR010985 Ribbon-helix-helix BED35_01060 IPR023453 Methionine repressor MetJ domain BED35_01065 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme BED35_01065 IPR011821 O-succinylhomoserine (thiol)-lyase BED35_01065 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BED35_01065 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 BED35_01065 IPR015424 Pyridoxal phosphate-dependent transferase BED35_01070 IPR001048 Aspartate/glutamate/uridylate kinase BED35_01070 IPR001341 Aspartate kinase domain BED35_01070 IPR001342 Homoserine dehydrogenase, catalytic BED35_01070 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding BED35_01070 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I BED35_01070 IPR018042 Aspartate kinase, conserved site BED35_01070 IPR019811 Homoserine dehydrogenase, conserved site BED35_01070 IPR036291 BED35_01070 BED35_01070 IPR036393 BED35_01070 BED35_01075 IPR003171 Methylenetetrahydrofolate reductase BED35_01075 IPR004620 5,10-methylenetetrahydrofolate reductase BED35_01075 IPR029041 FAD-linked oxidoreductase-like BED35_01080 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain BED35_01080 IPR018129 Phosphoenolpyruvate carboxylase, active site BED35_01080 IPR021135 Phosphoenolpyruvate carboxylase BED35_01080 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type BED35_01080 IPR033129 BED35_01080 BED35_01085 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site BED35_01085 IPR002933 Peptidase M20 BED35_01085 IPR010169 Acetylornithine deacetylase (ArgE) BED35_01085 IPR011650 Peptidase M20, dimerisation domain BED35_01085 IPR036264 BED35_01085 BED35_01090 IPR000534 Semialdehyde dehydrogenase, NAD-binding BED35_01090 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 BED35_01090 IPR012280 Semialdehyde dehydrogenase, dimerisation domain BED35_01090 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site BED35_01090 IPR036291 BED35_01090 BED35_01095 IPR001048 Aspartate/glutamate/uridylate kinase BED35_01095 IPR004662 Acetylglutamate kinase BED35_01095 IPR036393 BED35_01095 BED35_01095 IPR037528 BED35_01095 BED35_01100 IPR000362 Fumarate lyase family BED35_01100 IPR008948 L-Aspartase-like BED35_01100 IPR009049 Argininosuccinate lyase BED35_01100 IPR020557 Fumarate lyase, conserved site BED35_01100 IPR022761 Fumarate lyase, N-terminal BED35_01100 IPR024083 Fumarase/histidase, N-terminal BED35_01100 IPR029419 Argininosuccinate lyase, C-terminal BED35_01110 IPR010495 Haem-binding HasA BED35_01110 IPR036912 BED35_01110 BED35_01115 IPR010495 Haem-binding HasA BED35_01115 IPR036912 BED35_01115 BED35_01120 IPR010495 Haem-binding HasA BED35_01120 IPR036912 BED35_01120 BED35_01130 IPR003439 ABC transporter-like BED35_01130 IPR003593 AAA+ ATPase domain BED35_01130 IPR010128 ATPase, type I secretion system, PrtD BED35_01130 IPR011527 ABC transporter type 1, transmembrane domain BED35_01130 IPR017871 ABC transporter, conserved site BED35_01130 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_01130 IPR036640 BED35_01130 BED35_01135 IPR003997 RTX secretion protein D, Gram-negative bacteria BED35_01135 IPR010129 Type I secretion membrane fusion protein, HlyD BED35_01135 IPR039562 BED35_01135 BED35_01140 IPR006260 TonB, C-terminal BED35_01140 IPR037682 BED35_01140 BED35_01155 IPR002109 Glutaredoxin BED35_01155 IPR011767 Glutaredoxin active site BED35_01155 IPR011906 Glutaredoxin domain BED35_01155 IPR013740 Redoxin BED35_01155 IPR014025 Glutaredoxin subgroup BED35_01155 IPR036249 BED35_01155 BED35_01160 IPR000847 Transcription regulator HTH, LysR BED35_01160 IPR005119 LysR, substrate-binding BED35_01160 IPR036388 BED35_01160 BED35_01160 IPR036390 BED35_01160 BED35_01165 IPR001100 BED35_01165 BED35_01165 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BED35_01165 IPR016156 FAD/NAD-linked reductase, dimerisation domain BED35_01165 IPR022962 Soluble pyridine nucleotide transhydrogenase BED35_01165 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain BED35_01165 IPR036188 BED35_01165 BED35_01170 IPR001647 DNA-binding HTH domain, TetR-type BED35_01170 IPR009057 Homeodomain-like BED35_01170 IPR023764 Transcriptional repressor HTH, FabR BED35_01175 IPR009867 Protein of unknown function DUF1422 BED35_01180 IPR010280 (Uracil-5)-methyltransferase family BED35_01180 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA BED35_01180 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BED35_01180 IPR030390 BED35_01180 BED35_01180 IPR030391 BED35_01180 BED35_01185 IPR000531 TonB-dependent receptor, beta-barrel BED35_01185 IPR010101 TonB-dependent vitamin B12 transporter BtuB BED35_01185 IPR010917 TonB-dependent receptor, conserved site BED35_01185 IPR012910 TonB-dependent receptor, plug BED35_01185 IPR036942 BED35_01185 BED35_01185 IPR037066 BED35_01185 BED35_01190 IPR001920 Asp/Glu racemase BED35_01190 IPR004391 Glutamate racemase BED35_01190 IPR015942 Asp/Glu/hydantoin racemase BED35_01190 IPR018187 Asp/Glu racemase, active site BED35_01190 IPR033134 BED35_01190 BED35_01230 IPR025997 Periplasmic binding protein domain BED35_01230 IPR028082 Periplasmic binding protein-like I BED35_01235 IPR003439 ABC transporter-like BED35_01235 IPR003593 AAA+ ATPase domain BED35_01235 IPR017871 ABC transporter, conserved site BED35_01235 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_01240 IPR001851 ABC transporter, permease BED35_01245 IPR001851 ABC transporter, permease BED35_01250 IPR000847 Transcription regulator HTH, LysR BED35_01250 IPR005119 LysR, substrate-binding BED35_01250 IPR020890 Transcription regulator HTH, HdfR BED35_01250 IPR036388 BED35_01250 BED35_01250 IPR036390 BED35_01250 BED35_01255 IPR007335 Protein of unknown function DUF413 BED35_01260 IPR000523 Magnesium chelatase, ChlI subunit BED35_01260 IPR001208 Mini-chromosome maintenance, DNA-dependent ATPase BED35_01260 IPR003593 AAA+ ATPase domain BED35_01260 IPR004482 Mg chelatase-related protein BED35_01260 IPR020568 Ribosomal protein S5 domain 2-type fold BED35_01260 IPR025158 Mg chelatase-related protein, C-terminal domain BED35_01260 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_01265 IPR000399 TPP-binding enzyme, conserved site BED35_01265 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding BED35_01265 IPR012000 Thiamine pyrophosphate enzyme, central domain BED35_01265 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain BED35_01265 IPR012846 Acetolactate synthase, large subunit, biosynthetic BED35_01265 IPR029035 DHS-like NAD/FAD-binding domain BED35_01265 IPR029061 Thiamin diphosphate-binding fold BED35_01275 IPR001544 Aminotransferase, class IV BED35_01275 IPR005785 Branched-chain amino acid aminotransferase I BED35_01275 IPR018300 Aminotransferase, class IV, conserved site BED35_01275 IPR036038 BED35_01275 BED35_01280 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase BED35_01280 IPR004404 Dihydroxy-acid dehydratase BED35_01280 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site BED35_01280 IPR037237 BED35_01280 BED35_01285 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site BED35_01285 IPR001721 ACT-like domain BED35_01285 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme BED35_01285 IPR005787 Threonine dehydratase, biosynthetic BED35_01285 IPR036052 BED35_01285 BED35_01285 IPR038110 BED35_01285 BED35_01300 IPR000847 Transcription regulator HTH, LysR BED35_01300 IPR005119 LysR, substrate-binding BED35_01300 IPR036388 BED35_01300 BED35_01300 IPR036390 BED35_01300 BED35_01305 IPR000506 Acetohydroxy acid isomeroreductase C-terminal BED35_01305 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like BED35_01305 IPR013023 Acetohydroxy acid isomeroreductase BED35_01305 IPR013116 Acetohydroxy acid isomeroreductase, catalytic BED35_01305 IPR013328 Dehydrogenase, multihelical BED35_01305 IPR036291 BED35_01305 BED35_01315 IPR000290 Colicin immunity protein/pyocin immunity protein BED35_01315 IPR035900 BED35_01315 BED35_01320 IPR000290 Colicin immunity protein/pyocin immunity protein BED35_01320 IPR035900 BED35_01320 BED35_01325 IPR010534 Bacteriophage 933W, GpQ BED35_01330 IPR001829 Pili assembly chaperone, bacterial BED35_01330 IPR008962 PapD-like BED35_01330 IPR013783 Immunoglobulin-like fold BED35_01330 IPR016147 PapD, N-terminal, bacterial BED35_01330 IPR016148 Pili assembly chaperone, C-terminal domain BED35_01330 IPR018046 Pili assembly chaperone, conserved site BED35_01330 IPR036316 BED35_01330 BED35_01335 IPR000259 Fimbrial-type adhesion domain BED35_01335 IPR008966 Adhesion domain BED35_01335 IPR011228 Uncharacterised conserved protein UCP029766 BED35_01335 IPR036937 BED35_01335 BED35_01340 IPR025949 PapC-like, C-terminal domain BED35_01350 IPR001829 Pili assembly chaperone, bacterial BED35_01350 IPR008962 PapD-like BED35_01350 IPR013783 Immunoglobulin-like fold BED35_01350 IPR016147 PapD, N-terminal, bacterial BED35_01350 IPR016148 Pili assembly chaperone, C-terminal domain BED35_01350 IPR036316 BED35_01350 BED35_01355 IPR009057 Homeodomain-like BED35_01355 IPR038717 BED35_01355 BED35_01365 IPR000843 Transcription regulator HTH, LacI BED35_01365 IPR010982 Lambda repressor-like, DNA-binding domain BED35_01365 IPR028082 Periplasmic binding protein-like I BED35_01370 IPR000182 GNAT domain BED35_01370 IPR016181 Acyl-CoA N-acyltransferase BED35_01375 IPR031339 BED35_01375 BED35_01380 IPR009610 Protein of unknown function DUF1219 BED35_01390 IPR001207 Transposase, mutator type BED35_01395 IPR022742 Putative lysophospholipase BED35_01395 IPR029058 Alpha/Beta hydrolase fold BED35_01400 IPR008638 Filamentous haemagglutinin, N-terminal BED35_01400 IPR011050 Pectin lyase fold/virulence factor BED35_01400 IPR012334 Pectin lyase fold BED35_01410 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat BED35_01410 IPR012334 Pectin lyase fold BED35_01430 IPR003594 Histidine kinase-like ATPase, C-terminal domain BED35_01430 IPR007895 MASE1 BED35_01430 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain BED35_01430 IPR036890 BED35_01430 BED35_01435 IPR000792 Transcription regulator LuxR, C-terminal BED35_01435 IPR001789 Signal transduction response regulator, receiver domain BED35_01435 IPR011006 CheY-like superfamily BED35_01435 IPR016032 Signal transduction response regulator, C-terminal effector BED35_01440 IPR000917 Sulfatase BED35_01440 IPR012549 Domain of unknown function DUF1705 BED35_01440 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha BED35_01440 IPR017850 Alkaline-phosphatase-like, core domain BED35_01445 IPR003718 OsmC/Ohr family BED35_01445 IPR015946 K homology domain-like, alpha/beta BED35_01445 IPR019953 Organic hydroperoxide resistance protein famiy BED35_01445 IPR036102 BED35_01445 BED35_01450 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED35_01450 IPR003346 Transposase, IS116/IS110/IS902 BED35_01455 IPR000914 Bacterial extracellular solute-binding protein, family 5 BED35_01455 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site BED35_01455 IPR030678 BED35_01455 BED35_01460 IPR000515 MetI-like domain BED35_01460 IPR035906 BED35_01460 BED35_01465 IPR000515 MetI-like domain BED35_01465 IPR025966 Oligopeptide transport permease C-like, N-terminal domain BED35_01465 IPR035906 BED35_01465 BED35_01470 IPR003439 ABC transporter-like BED35_01470 IPR003593 AAA+ ATPase domain BED35_01470 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal BED35_01470 IPR017871 ABC transporter, conserved site BED35_01470 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_01475 IPR003439 ABC transporter-like BED35_01475 IPR003593 AAA+ ATPase domain BED35_01475 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal BED35_01475 IPR017871 ABC transporter, conserved site BED35_01475 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_01480 IPR017744 Cellulose synthase operon protein YhjU BED35_01485 IPR019995 Cellulose biosynthesis, BcsF/YhjT BED35_01490 IPR017745 Cellulose biosynthesis protein BcsE BED35_01495 IPR024487 Protein of unknown function DUF2629 BED35_01500 IPR017746 Cellulose synthase operon protein YhjQ BED35_01500 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_01505 IPR001173 Glycosyltransferase 2-like BED35_01505 IPR003919 Cellulose synthase, subunit A BED35_01505 IPR005150 Cellulose synthase BED35_01505 IPR009875 PilZ domain BED35_01505 IPR029044 Nucleotide-diphospho-sugar transferases BED35_01510 IPR003920 Cellulose synthase, subunit B BED35_01510 IPR008979 Galactose-binding domain-like BED35_01510 IPR018513 Cellulose synthase BcsB, bacterial BED35_01515 IPR002037 Glycoside hydrolase, family 8 BED35_01515 IPR008928 Six-hairpin glycosidase-like BED35_01515 IPR012341 Six-hairpin glycosidase BED35_01515 IPR019834 Glycoside hydrolase, family 8, conserved site BED35_01520 IPR008410 Cellulose synthase operon C, C-terminal BED35_01520 IPR011990 Tetratricopeptide-like helical domain BED35_01520 IPR019734 Tetratricopeptide repeat BED35_01530 IPR001633 EAL domain BED35_01530 IPR033419 BED35_01530 BED35_01530 IPR035919 BED35_01530 BED35_01535 IPR009331 Oligogalacturonate-specific porin BED35_01540 IPR010702 Periplasmic pectate lyase BED35_01545 IPR000421 Coagulation factor 5/8 C-terminal type domain BED35_01545 IPR008979 Galactose-binding domain-like BED35_01550 IPR001991 Sodium:dicarboxylate symporter BED35_01550 IPR018107 Sodium:dicarboxylate symporter, conserved site BED35_01550 IPR023954 C4-dicarboxylate transport protein BED35_01550 IPR036458 BED35_01550 BED35_01555 IPR007863 Peptidase M16, C-terminal domain BED35_01555 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like BED35_01555 IPR011765 Peptidase M16, N-terminal BED35_01560 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site BED35_01560 IPR011611 Carbohydrate kinase PfkB BED35_01560 IPR029056 Ribokinase-like BED35_01565 IPR004370 4-oxalocrotonate tautomerase BED35_01565 IPR014347 Tautomerase/MIF superfamily BED35_01565 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type BED35_01570 IPR001633 EAL domain BED35_01570 IPR035919 BED35_01570 BED35_01580 IPR003763 CDP-diacylglycerol pyrophosphatase BED35_01580 IPR036265 BED35_01580 BED35_01580 IPR038433 BED35_01580 BED35_01585 IPR005274 Inner membrane protein YhjD BED35_01585 IPR017039 Virulence factor BrkB BED35_01590 IPR004899 Pertactin, central region BED35_01590 IPR005546 Autotransporter beta-domain BED35_01590 IPR006315 Outer membrane autotransporter barrel BED35_01590 IPR011050 Pectin lyase fold/virulence factor BED35_01590 IPR012332 P22 tailspike C-terminal domain-like BED35_01590 IPR036709 BED35_01590 BED35_01595 IPR001100 BED35_01595 BED35_01595 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BED35_01595 IPR006322 Glutathione reductase, eukaryote/bacterial BED35_01595 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site BED35_01595 IPR016156 FAD/NAD-linked reductase, dimerisation domain BED35_01595 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain BED35_01595 IPR036188 BED35_01595 BED35_01600 IPR002052 DNA methylase, N-6 adenine-specific, conserved site BED35_01600 IPR007473 Ribosomal RNA large subunit methyltransferase J BED35_01600 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BED35_01605 IPR001567 Peptidase M3A/M3B BED35_01605 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 BED35_01610 IPR007536 Ribosomal RNA small subunit methyltransferase J BED35_01610 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BED35_01615 IPR011049 Serralysin-like metalloprotease, C-terminal BED35_01615 IPR013858 Peptidase M10 serralysin C-terminal domain BED35_01615 IPR024079 Metallopeptidase, catalytic domain BED35_01620 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase BED35_01620 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal BED35_01620 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain BED35_01620 IPR014362 Glutamate dehydrogenase BED35_01620 IPR033524 BED35_01620 BED35_01620 IPR036291 BED35_01620 BED35_01625 IPR006015 Universal stress protein A BED35_01625 IPR006016 UspA BED35_01625 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED35_01630 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED35_01630 IPR003346 Transposase, IS116/IS110/IS902 BED35_01635 IPR019598 Universal stress protein B BED35_01640 IPR001204 Phosphate transporter BED35_01645 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like BED35_01645 IPR023166 HI0933 insert-like domain BED35_01645 IPR036188 BED35_01645 BED35_01650 IPR011335 Restriction endonuclease type II-like BED35_01650 IPR011856 tRNA endonuclease-like domain BED35_01650 IPR014833 TnsA endonuclease, N-terminal BED35_01660 IPR003593 AAA+ ATPase domain BED35_01660 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_01675 IPR012337 Ribonuclease H-like domain BED35_01675 IPR033390 BED35_01675 BED35_01675 IPR036397 BED35_01675 BED35_01685 IPR012337 Ribonuclease H-like domain BED35_01685 IPR032874 BED35_01685 BED35_01690 IPR003593 AAA+ ATPase domain BED35_01690 IPR011704 ATPase, dynein-related, AAA domain BED35_01690 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_01700 IPR007685 RelA/SpoT BED35_01710 IPR001991 Sodium:dicarboxylate symporter BED35_01710 IPR036458 BED35_01710 BED35_01715 IPR025496 Protein of unknown function DUF4387 BED35_01720 IPR010839 Protein of unknown function DUF1446 BED35_01725 IPR006395 Methylaspartate ammonia-lyase BED35_01725 IPR022662 Methylaspartate ammonia-lyase, C-terminal BED35_01725 IPR022665 Methylaspartate ammonia-lyase, N-terminal BED35_01725 IPR029017 Enolase N-terminal domain-like BED35_01725 IPR036849 BED35_01725 BED35_01730 IPR006396 Glutamate mutase, E subunit BED35_01730 IPR014714 Glutamate mutase E subunit, C-terminal domain BED35_01730 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic BED35_01745 IPR006204 GHMP kinase N-terminal domain BED35_01745 IPR012363 Propanediol utilisation/coumermycin biosynthesis, PduX-related BED35_01745 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BED35_01745 IPR020568 Ribosomal protein S5 domain 2-type fold BED35_01750 IPR000878 Tetrapyrrole methylase BED35_01750 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site BED35_01750 IPR006366 Uroporphyrin-III C-methyltransferase BED35_01750 IPR014776 Tetrapyrrole methylase, subdomain 2 BED35_01750 IPR014777 Tetrapyrrole methylase, subdomain 1 BED35_01750 IPR035996 BED35_01750 BED35_01755 IPR000847 Transcription regulator HTH, LysR BED35_01755 IPR005119 LysR, substrate-binding BED35_01755 IPR036388 BED35_01755 BED35_01755 IPR036390 BED35_01755 BED35_01760 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain BED35_01760 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain BED35_01760 IPR011167 Iron-dependent fumarate hydratase BED35_01760 IPR020557 Fumarate lyase, conserved site BED35_01760 IPR036660 BED35_01760 BED35_01770 IPR000150 Cof protein BED35_01770 IPR006379 HAD-superfamily hydrolase, subfamily IIB BED35_01770 IPR023214 HAD-like domain BED35_01770 IPR036412 BED35_01770 BED35_01780 IPR000847 Transcription regulator HTH, LysR BED35_01780 IPR005119 LysR, substrate-binding BED35_01780 IPR036388 BED35_01780 BED35_01780 IPR036390 BED35_01780 BED35_01785 IPR011701 Major facilitator superfamily BED35_01785 IPR036259 BED35_01785 BED35_01790 IPR010061 Methylmalonate-semialdehyde dehydrogenase BED35_01790 IPR015590 Aldehyde dehydrogenase domain BED35_01790 IPR016161 Aldehyde/histidinol dehydrogenase BED35_01790 IPR016162 Aldehyde dehydrogenase, N-terminal BED35_01790 IPR016163 Aldehyde dehydrogenase, C-terminal BED35_01795 IPR011051 RmlC-like cupin domain BED35_01795 IPR014710 RmlC-like jelly roll fold BED35_01795 IPR021120 KduI/IolB isomerase BED35_01795 IPR024203 5-deoxy-glucuronate isomerase, IolB BED35_01800 IPR000281 Helix-turn-helix protein RpiR BED35_01800 IPR001347 Sugar isomerase (SIS) BED35_01800 IPR009057 Homeodomain-like BED35_01800 IPR036388 BED35_01800 BED35_01805 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site BED35_01805 IPR011611 Carbohydrate kinase PfkB BED35_01805 IPR013785 Aldolase-type TIM barrel BED35_01805 IPR018659 Protein of unknown function DUF2090 BED35_01805 IPR023314 Tagatose-6-phosphate kinase/1-phosphofructokinase N-terminal domain BED35_01805 IPR029056 Ribokinase-like BED35_01805 IPR030830 BED35_01805 BED35_01810 IPR000399 TPP-binding enzyme, conserved site BED35_01810 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding BED35_01810 IPR012000 Thiamine pyrophosphate enzyme, central domain BED35_01810 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain BED35_01810 IPR029035 DHS-like NAD/FAD-binding domain BED35_01810 IPR029061 Thiamin diphosphate-binding fold BED35_01810 IPR030817 BED35_01810 BED35_01815 IPR000683 Oxidoreductase, N-terminal BED35_01815 IPR004104 Oxidoreductase, C-terminal BED35_01815 IPR023794 Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase BED35_01815 IPR036291 BED35_01815 BED35_01820 IPR013022 Xylose isomerase-like, TIM barrel domain BED35_01820 IPR023952 Inosose dehydratase BED35_01820 IPR030823 BED35_01820 BED35_01820 IPR036237 BED35_01820 BED35_01825 IPR000182 GNAT domain BED35_01825 IPR016181 Acyl-CoA N-acyltransferase BED35_01830 IPR003829 Pirin, N-terminal domain BED35_01830 IPR011051 RmlC-like cupin domain BED35_01830 IPR012093 Pirin BED35_01830 IPR014710 RmlC-like jelly roll fold BED35_01835 IPR000843 Transcription regulator HTH, LacI BED35_01835 IPR001761 Periplasmic binding protein/LacI sugar binding domain BED35_01835 IPR010982 Lambda repressor-like, DNA-binding domain BED35_01835 IPR028082 Periplasmic binding protein-like I BED35_01840 IPR003474 Gluconate transporter BED35_01845 IPR006001 Carbohydrate kinase, thermoresistant glucokinase BED35_01845 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_01845 IPR031322 BED35_01845 BED35_01850 IPR002771 Multiple antibiotic resistance (MarC)-related BED35_01855 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site BED35_01855 IPR000534 Semialdehyde dehydrogenase, NAD-binding BED35_01855 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type BED35_01855 IPR012080 Aspartate-semialdehyde dehydrogenase BED35_01855 IPR012280 Semialdehyde dehydrogenase, dimerisation domain BED35_01855 IPR036291 BED35_01855 BED35_01860 IPR000399 TPP-binding enzyme, conserved site BED35_01860 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding BED35_01860 IPR012000 Thiamine pyrophosphate enzyme, central domain BED35_01860 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain BED35_01860 IPR012782 Acetolactate synthase, catabolic BED35_01860 IPR029035 DHS-like NAD/FAD-binding domain BED35_01860 IPR029061 Thiamin diphosphate-binding fold BED35_01865 IPR005128 Alpha-acetolactate decarboxylase BED35_01870 IPR000847 Transcription regulator HTH, LysR BED35_01870 IPR005119 LysR, substrate-binding BED35_01870 IPR036388 BED35_01870 BED35_01870 IPR036390 BED35_01870 BED35_01875 IPR010559 Signal transduction histidine kinase, internal region BED35_01875 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region BED35_01875 IPR036890 BED35_01875 BED35_01880 IPR004193 Glycoside hydrolase, family 13, N-terminal BED35_01880 IPR006047 Glycosyl hydrolase, family 13, catalytic domain BED35_01880 IPR006048 Alpha-amylase, C-terminal all beta BED35_01880 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB BED35_01880 IPR013780 Glycosyl hydrolase, family 13, all-beta BED35_01880 IPR013783 Immunoglobulin-like fold BED35_01880 IPR014756 Immunoglobulin E-set BED35_01880 IPR017853 Glycoside hydrolase, superfamily BED35_01880 IPR037439 BED35_01880 BED35_01885 IPR004193 Glycoside hydrolase, family 13, N-terminal BED35_01885 IPR006047 Glycosyl hydrolase, family 13, catalytic domain BED35_01885 IPR011837 Glycogen debranching enzyme, GlgX type BED35_01885 IPR013780 Glycosyl hydrolase, family 13, all-beta BED35_01885 IPR013783 Immunoglobulin-like fold BED35_01885 IPR014756 Immunoglobulin E-set BED35_01885 IPR017853 Glycoside hydrolase, superfamily BED35_01885 IPR022844 Glycogen debranching enzyme, bacterial BED35_01890 IPR005835 Nucleotidyl transferase BED35_01890 IPR005836 ADP-glucose pyrophosphorylase, conserved site BED35_01890 IPR011004 Trimeric LpxA-like BED35_01890 IPR011831 Glucose-1-phosphate adenylyltransferase BED35_01890 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial BED35_01890 IPR029044 Nucleotide-diphospho-sugar transferases BED35_01895 IPR001296 Glycosyl transferase, family 1 BED35_01895 IPR011835 Glycogen/starch synthase, ADP-glucose type BED35_01895 IPR013534 Starch synthase, catalytic domain BED35_01900 IPR000811 Glycosyl transferase, family 35 BED35_01900 IPR011833 Glycogen/starch/alpha-glucan phosphorylase BED35_01900 IPR035090 BED35_01900 BED35_01905 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase BED35_01905 IPR006076 FAD dependent oxidoreductase BED35_01905 IPR031656 BED35_01905 BED35_01905 IPR036188 BED35_01905 BED35_01905 IPR038299 BED35_01905 BED35_01915 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED35_01915 IPR003346 Transposase, IS116/IS110/IS902 BED35_01920 IPR001034 HTH DeoR N-terminal domain BED35_01920 IPR014036 DeoR C-terminal sensor domain BED35_01920 IPR036388 BED35_01920 BED35_01920 IPR036390 BED35_01920 BED35_01920 IPR037171 BED35_01920 BED35_01925 IPR022732 Peptidase S54, GlpG peptidase, N-terminal BED35_01925 IPR022764 Peptidase S54, rhomboid domain BED35_01925 IPR023662 Rhomboid protease GlpG BED35_01925 IPR035952 BED35_01925 BED35_01925 IPR038236 BED35_01925 BED35_01930 IPR001763 Rhodanese-like domain BED35_01930 IPR023695 Thiosulfate sulfurtransferase, bacterial BED35_01930 IPR036873 BED35_01930 BED35_01940 IPR000792 Transcription regulator LuxR, C-terminal BED35_01940 IPR011990 Tetratricopeptide-like helical domain BED35_01940 IPR016032 Signal transduction response regulator, C-terminal effector BED35_01940 IPR023768 Transcriptional regulator HTH-type, MalT BED35_01940 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_01940 IPR036388 BED35_01940 BED35_01945 IPR000811 Glycosyl transferase, family 35 BED35_01945 IPR011833 Glycogen/starch/alpha-glucan phosphorylase BED35_01945 IPR035090 BED35_01945 BED35_01950 IPR003385 Glycoside hydrolase, family 77 BED35_01950 IPR017853 Glycoside hydrolase, superfamily BED35_01955 IPR000361 FeS cluster biogenesis BED35_01955 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal BED35_01955 IPR017726 Fe/S biogenesis protein NfuA BED35_01955 IPR034904 BED35_01955 BED35_01955 IPR035903 BED35_01955 BED35_01960 IPR029057 Phosphoribosyltransferase-like BED35_01965 IPR000073 Alpha/beta hydrolase fold-1 BED35_01965 IPR010076 Pimelyl-[acyl-carrier protein] methyl ester esterase BED35_01965 IPR029058 Alpha/Beta hydrolase fold BED35_01970 IPR010854 Domain of unknown function DUF1471 BED35_01970 IPR025543 Dodecin-like BED35_01970 IPR036275 BED35_01970 BED35_01975 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED35_01975 IPR003346 Transposase, IS116/IS110/IS902 BED35_01980 IPR015102 Transcriptional regulator HTH-type, FeoC BED35_01980 IPR023732 Ferrous iron transport protein C BED35_01980 IPR036388 BED35_01980 BED35_01980 IPR036390 BED35_01980 BED35_01985 IPR003373 Ferrous iron transport protein B BED35_01985 IPR011640 Ferrous iron transport protein B, C-terminal BED35_01985 IPR011642 Nucleoside recognition Gate BED35_01985 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_01985 IPR030389 BED35_01985 BED35_01990 IPR007167 Ferrous iron transporter FeoA domain BED35_01990 IPR008988 Transcriptional repressor, C-terminal BED35_01990 IPR038157 BED35_01990 BED35_01995 IPR003029 Ribosomal protein S1, RNA-binding domain BED35_01995 IPR006641 YqgF/RNase H-like domain BED35_01995 IPR010994 RuvA domain 2-like BED35_01995 IPR012337 Ribonuclease H-like domain BED35_01995 IPR012340 Nucleic acid-binding, OB-fold BED35_01995 IPR018974 Tex-like protein, N-terminal BED35_01995 IPR022967 RNA-binding domain, S1 BED35_01995 IPR023319 Tex-like protein, HTH domain BED35_01995 IPR023323 Tex-like domain BED35_01995 IPR032639 BED35_01995 BED35_01995 IPR037027 BED35_01995 BED35_02000 IPR011701 Major facilitator superfamily BED35_02000 IPR036259 BED35_02000 BED35_02005 IPR016084 Haem oxygenase-like, multi-helical BED35_02015 IPR016084 Haem oxygenase-like, multi-helical BED35_02020 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal BED35_02020 IPR006358 Transcription elongation factor GreB BED35_02020 IPR018151 Transcription elongation factor, GreA/GreB, conserved site BED35_02020 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal BED35_02020 IPR023459 Transcription elongation factor GreA/GreB family BED35_02020 IPR028624 Transcription elongation factor GreA/GreB BED35_02020 IPR036805 BED35_02020 BED35_02020 IPR036953 BED35_02020 BED35_02025 IPR001789 Signal transduction response regulator, receiver domain BED35_02025 IPR001867 Signal transduction response regulator, C-terminal BED35_02025 IPR011006 CheY-like superfamily BED35_02025 IPR016032 Signal transduction response regulator, C-terminal effector BED35_02025 IPR036388 BED35_02025 BED35_02030 IPR003594 Histidine kinase-like ATPase, C-terminal domain BED35_02030 IPR003660 HAMP linker domain BED35_02030 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain BED35_02030 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BED35_02030 IPR036097 BED35_02030 BED35_02030 IPR036890 BED35_02030 BED35_02035 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising BED35_02035 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal BED35_02035 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal BED35_02035 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site BED35_02040 IPR000397 Heat shock protein Hsp33 BED35_02040 IPR016153 Heat shock protein Hsp33, N-terminal BED35_02040 IPR016154 Heat shock protein Hsp33, C-terminal BED35_02040 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain BED35_02045 IPR002942 RNA-binding S4 domain BED35_02045 IPR025708 Heat shock protein 15 BED35_02045 IPR036986 BED35_02045 BED35_02050 IPR006439 HAD hydrolase, subfamily IA BED35_02050 IPR023214 HAD-like domain BED35_02050 IPR036412 BED35_02050 BED35_02055 IPR010771 Intracellular growth attenuator IgaA BED35_02060 IPR000086 NUDIX hydrolase domain BED35_02060 IPR015797 NUDIX hydrolase domain-like BED35_02060 IPR020084 NUDIX hydrolase, conserved site BED35_02065 IPR001264 Glycosyl transferase, family 51 BED35_02065 IPR001460 Penicillin-binding protein, transpeptidase BED35_02065 IPR012338 Beta-lactamase/transpeptidase-like BED35_02065 IPR023346 Lysozyme-like domain BED35_02065 IPR031376 BED35_02065 BED35_02065 IPR036950 BED35_02065 BED35_02070 IPR005883 Type IV pilus assembly protein PilM BED35_02075 IPR007813 Fimbrial assembly PilN BED35_02085 IPR019684 Protein of unknown function DUF2531 BED35_02090 IPR001775 GspD/PilQ family BED35_02090 IPR004845 Type II secretion system GspD, conserved site BED35_02090 IPR004846 Type II/III secretion system BED35_02090 IPR005644 NolW-like BED35_02090 IPR013355 Type IV pilus secretin PilQ BED35_02090 IPR038591 BED35_02090 BED35_02095 IPR000623 Shikimate kinase/Threonine synthase-like 1 BED35_02095 IPR023000 Shikimate kinase, conserved site BED35_02095 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_02095 IPR031322 BED35_02095 BED35_02100 IPR016037 3-dehydroquinate synthase AroB BED35_02100 IPR030960 BED35_02100 BED35_02100 IPR030963 BED35_02100 BED35_02105 IPR007730 Sporulation-related domain BED35_02105 IPR032899 BED35_02105 BED35_02105 IPR036680 BED35_02105 BED35_02110 IPR002052 DNA methylase, N-6 adenine-specific, conserved site BED35_02110 IPR012263 Adenine modification methylase, M.EcoRV-type BED35_02110 IPR012327 D12 class N6 adenine-specific DNA methyltransferase BED35_02110 IPR023095 Adenine-specific methyltransferase, domain 2 BED35_02110 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BED35_02115 IPR000056 Ribulose-phosphate 3-epimerase-like BED35_02115 IPR011060 Ribulose-phosphate binding barrel BED35_02115 IPR013785 Aldolase-type TIM barrel BED35_02115 IPR026019 Ribulose-phosphate 3-epimerase BED35_02125 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site BED35_02125 IPR002305 Aminoacyl-tRNA synthetase, class Ic BED35_02125 IPR002306 Tryptophan-tRNA ligase BED35_02125 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED35_02125 IPR024109 Tryptophan-tRNA ligase, bacterial-type BED35_02130 IPR000878 Tetrapyrrole methylase BED35_02130 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site BED35_02130 IPR006366 Uroporphyrin-III C-methyltransferase BED35_02130 IPR006367 Sirohaem synthase, N-terminal BED35_02130 IPR012409 Sirohaem synthase BED35_02130 IPR014776 Tetrapyrrole methylase, subdomain 2 BED35_02130 IPR014777 Tetrapyrrole methylase, subdomain 1 BED35_02130 IPR019478 Sirohaem synthase, dimerisation domain BED35_02130 IPR028281 Siroheme synthase, central domain BED35_02130 IPR035996 BED35_02130 BED35_02130 IPR036291 BED35_02130 BED35_02130 IPR037115 BED35_02130 BED35_02140 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD BED35_02140 IPR036922 BED35_02140 BED35_02145 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain BED35_02145 IPR006066 Nitrite/sulphite reductase iron-sulphur/siroheam-binding site BED35_02145 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain BED35_02145 IPR007419 BFD-like [2Fe-2S]-binding domain BED35_02145 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB BED35_02145 IPR017121 Nitrite reductase [NAD(P)H], large subunit BED35_02145 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain BED35_02145 IPR036136 BED35_02145 BED35_02145 IPR036188 BED35_02145 BED35_02150 IPR011059 Metal-dependent hydrolase, composite domain BED35_02150 IPR013108 Amidohydrolase 3 BED35_02150 IPR032466 BED35_02150 BED35_02155 IPR011701 Major facilitator superfamily BED35_02155 IPR023528 Major facilitator superfamily transporter, TsgA BED35_02155 IPR036259 BED35_02155 BED35_02160 IPR000843 Transcription regulator HTH, LacI BED35_02160 IPR010982 Lambda repressor-like, DNA-binding domain BED35_02160 IPR028082 Periplasmic binding protein-like I BED35_02165 IPR001088 Glycoside hydrolase, family 4 BED35_02165 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal BED35_02165 IPR019802 Glycoside hydrolase, family 4, conserved site BED35_02165 IPR022616 Glycosyl hydrolase, family 4, C-terminal BED35_02165 IPR036291 BED35_02165 BED35_02170 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain BED35_02170 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site BED35_02170 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase BED35_02170 IPR029000 Cyclophilin-like domain BED35_02175 IPR003593 AAA+ ATPase domain BED35_02175 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_02175 IPR033186 BED35_02175 BED35_02180 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain BED35_02180 IPR017926 Glutamine amidotransferase BED35_02180 IPR029062 Class I glutamine amidotransferase-like BED35_02185 IPR004636 Acetylornithine/Succinylornithine transaminase family BED35_02185 IPR005814 Aminotransferase class-III BED35_02185 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BED35_02185 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 BED35_02185 IPR015424 Pyridoxal phosphate-dependent transferase BED35_02185 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria BED35_02195 IPR000595 Cyclic nucleotide-binding domain BED35_02195 IPR012318 Helix-turn-helix motif, Crp-type BED35_02195 IPR014710 RmlC-like jelly roll fold BED35_02195 IPR018335 Transcription regulator HTH, Crp-type, conserved site BED35_02195 IPR018488 Cyclic nucleotide-binding, conserved site BED35_02195 IPR018490 Cyclic nucleotide-binding-like BED35_02195 IPR036388 BED35_02195 BED35_02195 IPR036390 BED35_02195 BED35_02200 IPR003718 OsmC/Ohr family BED35_02200 IPR015946 K homology domain-like, alpha/beta BED35_02200 IPR036102 BED35_02200 BED35_02205 IPR006082 Phosphoribulokinase BED35_02205 IPR006083 Phosphoribulokinase/uridine kinase BED35_02205 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_02210 IPR010648 Uncharacterised protein family UPF0270 BED35_02210 IPR036685 BED35_02210 BED35_02215 IPR000073 Alpha/beta hydrolase fold-1 BED35_02215 IPR000952 Uncharacterised protein family UPF0017, hydrolase-like, conserved site BED35_02215 IPR012020 AB-hydrolase YheT, putative BED35_02215 IPR029058 Alpha/Beta hydrolase fold BED35_02220 IPR001123 Lysine-type exporter protein (LYSE/YGGA) BED35_02225 IPR003719 Phenazine biosynthesis PhzF protein BED35_02230 IPR001638 Extracellular solute-binding protein, family 3 BED35_02230 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain BED35_02230 IPR010068 Taurine ABC transporter, periplasmic binding protein TauA BED35_02240 IPR000515 MetI-like domain BED35_02240 IPR035906 BED35_02240 BED35_02245 IPR003819 Taurine catabolism dioxygenase TauD/TfdA BED35_02250 IPR002201 Glycosyl transferase, family 9 BED35_02255 IPR001173 Glycosyltransferase 2-like BED35_02255 IPR029044 Nucleotide-diphospho-sugar transferases BED35_02260 IPR003439 ABC transporter-like BED35_02260 IPR003593 AAA+ ATPase domain BED35_02260 IPR017871 ABC transporter, conserved site BED35_02260 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_02260 IPR032781 BED35_02260 BED35_02265 IPR003680 Flavodoxin-like fold BED35_02265 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG BED35_02265 IPR029039 Flavoprotein-like BED35_02270 IPR003148 Regulator of K+ conductance, N-terminal BED35_02270 IPR004771 K+/H+ exchanger BED35_02270 IPR006153 Cation/H+ exchanger BED35_02270 IPR020884 Glutathione-regulated potassium-efflux system protein KefB BED35_02270 IPR036291 BED35_02270 BED35_02270 IPR038770 BED35_02270 BED35_02275 IPR012658 Conserved hypothetical protein CHP02443 BED35_02280 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain BED35_02285 IPR007236 SlyX BED35_02290 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal BED35_02290 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain BED35_02290 IPR036944 BED35_02290 BED35_02295 IPR013559 YheO-like BED35_02295 IPR039445 BED35_02295 BED35_02300 IPR003787 Sulphur relay, DsrE/F-like protein BED35_02300 IPR017463 Sulphur relay, TusD/DsrE BED35_02300 IPR027396 DsrEFH-like BED35_02305 IPR003787 Sulphur relay, DsrE/F-like protein BED35_02305 IPR017462 Sulphur relay, TusC/DsrF BED35_02305 IPR027396 DsrEFH-like BED35_02305 IPR037450 BED35_02305 BED35_02310 IPR007215 Sulphur relay, TusB/DsrH BED35_02310 IPR023526 Sulphur relay, TusB BED35_02310 IPR027396 DsrEFH-like BED35_02315 IPR005679 Ribosomal protein S12, bacteria BED35_02315 IPR006032 Ribosomal protein S12/S23 BED35_02315 IPR012340 Nucleic acid-binding, OB-fold BED35_02320 IPR000235 Ribosomal protein S5/S7 BED35_02320 IPR005717 Ribosomal protein S7, bacterial/organellar-type BED35_02320 IPR020606 Ribosomal protein S7, conserved site BED35_02320 IPR023798 Ribosomal protein S7 domain BED35_02320 IPR036823 BED35_02320 BED35_02325 IPR000640 Translation elongation factor EFG, V domain BED35_02325 IPR000795 Elongation factor, GTP-binding domain BED35_02325 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 BED35_02325 IPR004540 Translation elongation factor EFG/EF2 BED35_02325 IPR005225 Small GTP-binding protein domain BED35_02325 IPR005517 Translation elongation factor EFG/EF2, domain IV BED35_02325 IPR009000 Translation protein, beta-barrel domain BED35_02325 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BED35_02325 IPR020568 Ribosomal protein S5 domain 2-type fold BED35_02325 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_02325 IPR031157 BED35_02325 BED35_02325 IPR035647 BED35_02325 BED35_02335 IPR007419 BFD-like [2Fe-2S]-binding domain BED35_02340 IPR002024 Bacterioferritin BED35_02340 IPR008331 Ferritin/DPS protein domain BED35_02340 IPR009078 Ferritin-like superfamily BED35_02340 IPR012347 Ferritin-related BED35_02345 IPR001848 Ribosomal protein S10 BED35_02345 IPR018268 Ribosomal protein S10, conserved site BED35_02345 IPR027486 Ribosomal protein S10 domain BED35_02345 IPR036838 BED35_02345 BED35_02350 IPR000597 Ribosomal protein L3 BED35_02350 IPR009000 Translation protein, beta-barrel domain BED35_02350 IPR019926 Ribosomal protein L3, conserved site BED35_02350 IPR019927 Ribosomal protein L3, bacterial/organelle-type BED35_02355 IPR002136 Ribosomal protein L4/L1e BED35_02355 IPR013005 Ribosomal protein L4/L1e, bacterial-type BED35_02355 IPR023574 Ribosomal protein L4 domain BED35_02360 IPR001014 Ribosomal protein L23/L25, conserved site BED35_02360 IPR012677 Nucleotide-binding, alpha-beta plait BED35_02360 IPR012678 Ribosomal protein L23/L15e core domain BED35_02360 IPR013025 Ribosomal protein L25/L23 BED35_02365 IPR002171 Ribosomal protein L2 BED35_02365 IPR005880 Ribosomal protein L2, bacterial/organellar-type BED35_02365 IPR008991 Translation protein SH3-like domain BED35_02365 IPR012340 Nucleic acid-binding, OB-fold BED35_02365 IPR014722 Ribosomal protein L2 domain 2 BED35_02365 IPR014726 Ribosomal protein L2, domain 3 BED35_02365 IPR022666 Ribosomal Proteins L2, RNA binding domain BED35_02365 IPR022669 Ribosomal protein L2, C-terminal BED35_02365 IPR022671 Ribosomal protein L2, conserved site BED35_02370 IPR002222 Ribosomal protein S19/S15 BED35_02370 IPR005732 Ribosomal protein S19, bacterial-type BED35_02370 IPR020934 Ribosomal protein S19 conserved site BED35_02370 IPR023575 Ribosomal protein S19, superfamily BED35_02375 IPR001063 Ribosomal protein L22/L17 BED35_02375 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type BED35_02375 IPR018260 Ribosomal protein L22/L17, conserved site BED35_02375 IPR036394 BED35_02375 BED35_02380 IPR001351 Ribosomal protein S3, C-terminal BED35_02380 IPR004044 K Homology domain, type 2 BED35_02380 IPR004087 K Homology domain BED35_02380 IPR005704 Ribosomal protein S3, bacterial BED35_02380 IPR009019 K homology domain, prokaryotic type BED35_02380 IPR015946 K homology domain-like, alpha/beta BED35_02380 IPR018280 Ribosomal protein S3, conserved site BED35_02380 IPR036419 BED35_02380 BED35_02385 IPR000114 Ribosomal protein L16 BED35_02385 IPR016180 Ribosomal protein L10e/L16 BED35_02385 IPR020798 Ribosomal protein L16, conserved site BED35_02385 IPR036920 BED35_02385 BED35_02390 IPR001854 Ribosomal protein L29 BED35_02390 IPR036049 BED35_02390 BED35_02395 IPR000266 Ribosomal protein S17 BED35_02395 IPR012340 Nucleic acid-binding, OB-fold BED35_02395 IPR019979 Ribosomal protein S17, conserved site BED35_02395 IPR019984 Ribosomal protein S17, bacterial-type BED35_02400 IPR000218 Ribosomal protein L14b/L23e BED35_02400 IPR005745 Ribosomal protein L14, bacterial-type BED35_02400 IPR019972 Ribosomal protein L14 conserved site BED35_02400 IPR036853 BED35_02400 BED35_02405 IPR003256 Ribosomal protein L24 BED35_02405 IPR005824 KOW BED35_02405 IPR005825 Ribosomal protein L24/L26, conserved site BED35_02405 IPR008991 Translation protein SH3-like domain BED35_02405 IPR014722 Ribosomal protein L2 domain 2 BED35_02410 IPR002132 Ribosomal protein L5 BED35_02410 IPR020930 Ribosomal protein L5, bacterial-type BED35_02410 IPR022803 Ribosomal protein L5 domain BED35_02410 IPR031309 BED35_02410 BED35_02410 IPR031310 BED35_02410 BED35_02415 IPR001209 Ribosomal protein S14 BED35_02415 IPR018271 Ribosomal protein S14, conserved site BED35_02415 IPR023036 Ribosomal protein S14, bacterial/plastid BED35_02420 IPR000630 Ribosomal protein S8 BED35_02420 IPR035987 BED35_02420 BED35_02425 IPR000702 Ribosomal protein L6 BED35_02425 IPR002358 Ribosomal protein L6, conserved site BED35_02425 IPR019906 Ribosomal protein L6, bacterial-type BED35_02425 IPR020040 Ribosomal protein L6, alpha-beta domain BED35_02425 IPR036789 BED35_02425 BED35_02430 IPR004389 Ribosomal protein L18, bacterial-type BED35_02430 IPR005484 Ribosomal protein L18/L5 BED35_02435 IPR005324 Ribosomal protein S5, C-terminal BED35_02435 IPR005712 Ribosomal protein S5, bacterial-type BED35_02435 IPR013810 Ribosomal protein S5, N-terminal BED35_02435 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BED35_02435 IPR018192 Ribosomal protein S5, N-terminal, conserved site BED35_02435 IPR020568 Ribosomal protein S5 domain 2-type fold BED35_02440 IPR005996 Ribosomal protein L30, bacterial-type BED35_02440 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain BED35_02440 IPR018038 Ribosomal protein L30, conserved site BED35_02440 IPR036919 BED35_02440 BED35_02445 IPR001196 Ribosomal protein L15, conserved site BED35_02445 IPR005749 Ribosomal protein L15, bacterial-type BED35_02445 IPR021131 Ribosomal protein L18e/L15P BED35_02445 IPR030878 BED35_02445 BED35_02445 IPR036227 BED35_02445 BED35_02450 IPR002208 SecY/SEC61-alpha family BED35_02450 IPR023201 SecY subunit domain BED35_02450 IPR026593 Protein translocase subunit SecY BED35_02450 IPR030659 BED35_02450 BED35_02455 IPR000473 Ribosomal protein L36 BED35_02455 IPR035977 BED35_02455 BED35_02465 IPR001971 Ribosomal protein S11 BED35_02465 IPR018102 Ribosomal S11, conserved site BED35_02465 IPR019981 Ribosomal protein S11, bacterial-type BED35_02465 IPR036967 BED35_02465 BED35_02470 IPR001912 Ribosomal protein S4/S9, N-terminal BED35_02470 IPR002942 RNA-binding S4 domain BED35_02470 IPR005709 Ribosomal protein S4, bacterial-type BED35_02470 IPR018079 Ribosomal protein S4, conserved site BED35_02470 IPR036986 BED35_02470 BED35_02475 IPR011260 RNA polymerase, alpha subunit, C-terminal BED35_02475 IPR011262 DNA-directed RNA polymerase, insert domain BED35_02475 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type BED35_02475 IPR011773 DNA-directed RNA polymerase, alpha subunit BED35_02475 IPR036603 BED35_02475 BED35_02475 IPR036643 BED35_02475 BED35_02480 IPR000456 Ribosomal protein L17 BED35_02480 IPR036373 BED35_02480 BED35_02485 IPR018961 DnaJ homologue, subfamily C, member 28, conserved domain BED35_02490 IPR000551 MerR-type HTH domain BED35_02490 IPR009061 DNA binding domain, putative BED35_02490 IPR011788 Zn(II)-responsive transcriptional regulator BED35_02495 IPR005589 Protein of unknown function DUF331 BED35_02500 IPR008490 Transposase InsH, N-terminal BED35_02500 IPR025668 Transposase DDE domain BED35_02505 IPR001185 Large-conductance mechanosensitive channel BED35_02505 IPR019823 Large-conductance mechanosensitive channel, conserved site BED35_02505 IPR036019 BED35_02505 BED35_02505 IPR037673 BED35_02505 BED35_02510 IPR003148 Regulator of K+ conductance, N-terminal BED35_02510 IPR006036 Potassium uptake protein TrkA BED35_02510 IPR006037 Regulator of K+ conductance, C-terminal BED35_02510 IPR036291 BED35_02510 BED35_02510 IPR036721 BED35_02510 BED35_02515 IPR001678 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p BED35_02515 IPR004573 rRNA small subunit methyltransferase B BED35_02515 IPR006027 NusB/RsmB/TIM44 BED35_02515 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site BED35_02515 IPR023267 RNA (C5-cytosine) methyltransferase BED35_02515 IPR023541 rRNA small subunit methyltransferase B, enterobacteriaceae BED35_02515 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BED35_02515 IPR035926 BED35_02515 BED35_02520 IPR001555 Phosphoribosylglycinamide formyltransferase, active site BED35_02520 IPR002376 Formyl transferase, N-terminal BED35_02520 IPR005793 Formyl transferase, C-terminal BED35_02520 IPR005794 Methionyl-tRNA formyltransferase BED35_02520 IPR011034 Formyl transferase, C-terminal-like BED35_02520 IPR036477 BED35_02520 BED35_02520 IPR037022 BED35_02520 BED35_02525 IPR023635 Peptide deformylase BED35_02525 IPR036821 BED35_02525 BED35_02530 IPR003488 DNA recombination-mediator protein A BED35_02535 IPR007456 Protein of unknown function DUF494 BED35_02540 IPR013498 DNA topoisomerase, type IA, zn finger BED35_02540 IPR014538 Uncharacterised conserved protein, topoisomerase zinc finger BED35_02545 IPR006070 YrdC-like domain BED35_02545 IPR017945 DHBP synthase RibB-like alpha/beta domain BED35_02545 IPR023535 Threonylcarbamoyl-AMP synthase BED35_02550 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase BED35_02550 IPR011342 Shikimate dehydrogenase BED35_02550 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal BED35_02550 IPR022893 Shikimate, quinate/shikimate dehydrogenase BED35_02550 IPR036291 BED35_02550 BED35_02555 IPR001451 Bacterial transferase hexapeptide repeat BED35_02555 IPR011004 Trimeric LpxA-like BED35_02580 IPR010921 Trp repressor/replication initiator BED35_02590 IPR005697 Homoserine O-succinyltransferase BED35_02590 IPR029062 Class I glutamine amidotransferase-like BED35_02590 IPR033752 BED35_02590 BED35_02595 IPR001465 Malate synthase BED35_02595 IPR006252 Malate synthase A BED35_02595 IPR011076 Malate synthase-like BED35_02600 IPR006254 Isocitrate lyase BED35_02600 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain BED35_02600 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site BED35_02605 IPR010452 Isocitrate dehydrogenase kinasephosphatase BED35_02610 IPR005471 Transcription regulator IclR, N-terminal BED35_02610 IPR014757 Transcription regulator IclR, C-terminal BED35_02610 IPR029016 GAF domain-like BED35_02610 IPR036388 BED35_02610 BED35_02610 IPR036390 BED35_02610 BED35_02615 IPR000489 Pterin-binding BED35_02615 IPR003726 Homocysteine S-methyltransferase BED35_02615 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain BED35_02615 IPR004223 Vitamin B12-dependent methionine synthase, activation domain BED35_02615 IPR006158 Cobalamin (vitamin B12)-binding domain BED35_02615 IPR011005 Dihydropteroate synthase-like BED35_02615 IPR011822 Cobalamin-dependent methionine synthase BED35_02615 IPR036589 BED35_02615 BED35_02615 IPR036594 BED35_02615 BED35_02615 IPR036724 BED35_02615 BED35_02615 IPR037010 BED35_02615 BED35_02620 IPR008638 Filamentous haemagglutinin, N-terminal BED35_02620 IPR011050 Pectin lyase fold/virulence factor BED35_02620 IPR012334 Pectin lyase fold BED35_02620 IPR025157 Haemagluttinin repeat BED35_02625 IPR005565 Haemolysin activator HlyB BED35_02625 IPR013686 Polypeptide-transport-associated, ShlB-type BED35_02625 IPR027282 Two partner secretion pathway transporter BED35_02625 IPR035251 BED35_02625 BED35_02635 IPR001048 Aspartate/glutamate/uridylate kinase BED35_02635 IPR001341 Aspartate kinase domain BED35_02635 IPR005260 Aspartate kinase, monofunctional class BED35_02635 IPR018042 Aspartate kinase, conserved site BED35_02635 IPR036393 BED35_02635 BED35_02640 IPR001672 Phosphoglucose isomerase (PGI) BED35_02640 IPR018189 Phosphoglucose isomerase, conserved site BED35_02640 IPR023096 Phosphoglucose isomerase, C-terminal BED35_02645 IPR009315 Phosphate-starvation-induced PsiE BED35_02645 IPR020948 Phosphate-starvation-induced PsiE-like BED35_02650 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED35_02650 IPR003346 Transposase, IS116/IS110/IS902 BED35_02655 IPR000515 MetI-like domain BED35_02655 IPR035906 BED35_02655 BED35_02665 IPR006059 Bacterial extracellular solute-binding, family 1 BED35_02665 IPR006060 Maltose binding protein BED35_02665 IPR006061 Bacterial extracellular solute-binding family 1, conserved site BED35_02670 IPR003439 ABC transporter-like BED35_02670 IPR003593 AAA+ ATPase domain BED35_02670 IPR008995 Molybdate/tungstate binding, C-terminal BED35_02670 IPR013611 Transport-associated OB, type 2 BED35_02670 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_02675 IPR003192 Porin, LamB type BED35_02675 IPR023738 Maltoporin BED35_02675 IPR036998 BED35_02675 BED35_02680 IPR010794 Maltose operon periplasmic BED35_02685 IPR011009 Protein kinase-like domain BED35_02690 IPR007440 Chorismate--pyruvate lyase BED35_02690 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain BED35_02695 IPR000537 UbiA prenyltransferase family BED35_02695 IPR006370 4-hydroxybenzoate polyprenyl transferase BED35_02695 IPR030470 BED35_02695 BED35_02700 IPR002123 Phospholipid/glycerol acyltransferase BED35_02700 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase BED35_02700 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB BED35_02705 IPR000829 Diacylglycerol kinase, prokaryotic BED35_02705 IPR036945 BED35_02705 BED35_02710 IPR006197 Peptidase S24, LexA-like BED35_02710 IPR006199 LexA repressor, DNA-binding domain BED35_02710 IPR006200 LexA repressor BED35_02710 IPR015927 Peptidase S24/S26A/S26B/S26C BED35_02710 IPR036286 BED35_02710 BED35_02710 IPR036388 BED35_02710 BED35_02710 IPR036390 BED35_02710 BED35_02715 IPR008462 CsbD-like BED35_02715 IPR026042 Stress response protein YjbJ BED35_02715 IPR036629 BED35_02715 BED35_02720 IPR002481 Ferric-uptake regulator BED35_02720 IPR036388 BED35_02720 BED35_02720 IPR036390 BED35_02720 BED35_02725 IPR002656 Acyltransferase 3 BED35_02730 IPR001269 tRNA-dihydrouridine synthase BED35_02730 IPR004653 tRNA-dihydrouridine synthase, TIM-barrel, YjbN BED35_02730 IPR013785 Aldolase-type TIM barrel BED35_02730 IPR018517 tRNA-dihydrouridine synthase, conserved site BED35_02735 IPR014318 Phage shock protein, PspG BED35_02745 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site BED35_02745 IPR011032 GroES (chaperonin 10)-like BED35_02745 IPR013149 Alcohol dehydrogenase, C-terminal BED35_02745 IPR013154 Alcohol dehydrogenase GroES-like BED35_02745 IPR020843 Polyketide synthase, enoylreductase BED35_02745 IPR036291 BED35_02745 BED35_02750 IPR003593 AAA+ ATPase domain BED35_02750 IPR007692 DNA helicase, DnaB type BED35_02750 IPR007693 DNA helicase, DnaB-like, N-terminal BED35_02750 IPR007694 DNA helicase, DnaB-like, C-terminal BED35_02750 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal BED35_02750 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_02750 IPR036185 BED35_02750 BED35_02760 IPR000796 Aspartate/other aminotransferase BED35_02760 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site BED35_02760 IPR004839 Aminotransferase, class I/classII BED35_02760 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BED35_02760 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 BED35_02760 IPR015424 Pyridoxal phosphate-dependent transferase BED35_02765 IPR007351 Uncharacterised protein YjbR BED35_02765 IPR038056 BED35_02765 BED35_02770 IPR004602 UvrABC system subunit A BED35_02770 IPR017871 ABC transporter, conserved site BED35_02770 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_02775 IPR000424 Primosome PriB/single-strand DNA-binding BED35_02775 IPR011344 Single-stranded DNA-binding protein BED35_02775 IPR012340 Nucleic acid-binding, OB-fold BED35_02780 IPR012893 HipA-like, C-terminal BED35_02780 IPR017508 HipA, N-terminal subdomain 1 BED35_02785 IPR001387 Cro/C1-type helix-turn-helix domain BED35_02785 IPR010982 Lambda repressor-like, DNA-binding domain BED35_02790 IPR004045 Glutathione S-transferase, N-terminal BED35_02790 IPR004046 Glutathione S-transferase, C-terminal BED35_02790 IPR036249 BED35_02790 BED35_02790 IPR036282 BED35_02790 BED35_02795 IPR006043 Xanthine/uracil/vitamin C permease BED35_02800 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria BED35_02800 IPR006153 Cation/H+ exchanger BED35_02805 IPR000847 Transcription regulator HTH, LysR BED35_02805 IPR005119 LysR, substrate-binding BED35_02805 IPR036388 BED35_02805 BED35_02805 IPR036390 BED35_02805 BED35_02810 IPR005538 LrgA/CidA family BED35_02820 IPR003439 ABC transporter-like BED35_02820 IPR003593 AAA+ ATPase domain BED35_02820 IPR017871 ABC transporter, conserved site BED35_02820 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_02820 IPR030679 BED35_02820 BED35_02825 IPR000515 MetI-like domain BED35_02825 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family BED35_02825 IPR035906 BED35_02825 BED35_02830 IPR000515 MetI-like domain BED35_02830 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family BED35_02830 IPR035906 BED35_02830 BED35_02835 IPR001638 Extracellular solute-binding protein, family 3 BED35_02835 IPR018313 Extracellular solute-binding protein, family 3, conserved site BED35_02840 IPR009199 PhoPQ-activated pathogenicity-related protein, PqaA type BED35_02840 IPR029058 Alpha/Beta hydrolase fold BED35_02845 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED35_02845 IPR003346 Transposase, IS116/IS110/IS902 BED35_02850 IPR004960 Bacterial lipid A biosynthesis acyltransferase BED35_02850 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase BED35_02850 IPR030857 BED35_02850 BED35_02855 IPR001898 Sodium/sulphate symporter BED35_02855 IPR030676 BED35_02855 BED35_02860 IPR002059 Cold-shock protein, DNA-binding BED35_02860 IPR011129 Cold shock protein BED35_02860 IPR012156 Cold shock, CspA BED35_02860 IPR012340 Nucleic acid-binding, OB-fold BED35_02860 IPR019844 Cold-shock conserved site BED35_02865 IPR002059 Cold-shock protein, DNA-binding BED35_02865 IPR011129 Cold shock protein BED35_02865 IPR012156 Cold shock, CspA BED35_02865 IPR012340 Nucleic acid-binding, OB-fold BED35_02865 IPR019844 Cold-shock conserved site BED35_02870 IPR008816 Glycine zipper 2TM domain BED35_02880 IPR002197 DNA binding HTH domain, Fis-type BED35_02880 IPR005412 DNA-binding protein Fis BED35_02880 IPR009057 Homeodomain-like BED35_02885 IPR001269 tRNA-dihydrouridine synthase BED35_02885 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 BED35_02885 IPR013785 Aldolase-type TIM barrel BED35_02885 IPR018517 tRNA-dihydrouridine synthase, conserved site BED35_02885 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal BED35_02885 IPR032887 BED35_02885 BED35_02890 IPR004498 Ribosomal protein L11 methyltransferase BED35_02890 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BED35_02895 IPR001734 Sodium/solute symporter BED35_02895 IPR011849 Sodium/pantothenate symporter BED35_02895 IPR018212 Sodium/solute symporter, conserved site BED35_02895 IPR038377 BED35_02895 BED35_02900 IPR010398 Protein of unknown function DUF997 BED35_02905 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase BED35_02905 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain BED35_02905 IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal BED35_02905 IPR005482 Biotin carboxylase, C-terminal BED35_02905 IPR011054 Rudiment single hybrid motif BED35_02905 IPR013815 ATP-grasp fold, subdomain 1 BED35_02905 IPR016185 Pre-ATP-grasp domain BED35_02910 IPR000089 Biotin/lipoyl attachment BED35_02910 IPR001249 Acetyl-CoA biotin carboxyl carrier BED35_02910 IPR001882 Biotin-binding site BED35_02910 IPR011053 Single hybrid motif BED35_02915 IPR001874 Dehydroquinase, class II BED35_02915 IPR018509 Dehydroquinase, class II, conserved site BED35_02915 IPR036441 BED35_02915 BED35_02920 IPR013130 Ferric reductase transmembrane component-like domain BED35_02920 IPR022837 Sulphoxide reductase heme-binding subunit YedZ BED35_02925 IPR000572 Oxidoreductase, molybdopterin-binding domain BED35_02925 IPR022867 Sulphoxide reductase catalytic subunit YedY BED35_02925 IPR036374 BED35_02925 BED35_02930 IPR011032 GroES (chaperonin 10)-like BED35_02930 IPR013149 Alcohol dehydrogenase, C-terminal BED35_02930 IPR013154 Alcohol dehydrogenase GroES-like BED35_02930 IPR014188 Acrylyl-CoA reductase AcuI BED35_02930 IPR020843 Polyketide synthase, enoylreductase BED35_02930 IPR036291 BED35_02930 BED35_02935 IPR000160 GGDEF domain BED35_02935 IPR001633 EAL domain BED35_02935 IPR029787 Nucleotide cyclase BED35_02935 IPR033423 BED35_02935 BED35_02935 IPR035919 BED35_02935 BED35_02940 IPR004753 Cell shape determining protein MreB/Mrl BED35_02945 IPR007221 Rod shape-determining protein MreC BED35_02950 IPR007227 Cell shape-determining protein MreD BED35_02950 IPR026034 Cell shape-determining protein MreD, proteobacterial type BED35_02955 IPR003697 Maf-like protein BED35_02955 IPR029001 Inosine triphosphate pyrophosphatase-like BED35_02960 IPR003029 Ribosomal protein S1, RNA-binding domain BED35_02960 IPR004659 Ribonuclease E/G BED35_02960 IPR012340 Nucleic acid-binding, OB-fold BED35_02960 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G BED35_02960 IPR022967 RNA-binding domain, S1 BED35_02965 IPR011836 Conserved hypothetical protein CHP02099 BED35_02965 IPR025263 Domain of unknown function DUF3971 BED35_02965 IPR032712 BED35_02965 BED35_02970 IPR001110 Uncharacterised protein family UPF0012, conserved site BED35_02970 IPR003010 Carbon-nitrogen hydrolase BED35_02970 IPR036526 BED35_02970 BED35_02975 IPR002510 TldD/PmbA BED35_02975 IPR025502 TldD BED35_02975 IPR035068 BED35_02975 BED35_02975 IPR036059 BED35_02975 BED35_02980 IPR012893 HipA-like, C-terminal BED35_02980 IPR017508 HipA, N-terminal subdomain 1 BED35_02985 IPR001387 Cro/C1-type helix-turn-helix domain BED35_02985 IPR010982 Lambda repressor-like, DNA-binding domain BED35_02995 IPR022538 Protein of unknown function DUF2570 BED35_03000 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain BED35_03000 IPR039561 BED35_03000 BED35_03005 IPR032126 BED35_03005 BED35_03010 IPR003284 Salmonella virulence plasmid 65kDa B protein BED35_03010 IPR022044 Insecticide toxin TcdB middle/C-terminal BED35_03010 IPR022045 Insecticide toxin TcdB middle/N-terminal BED35_03030 IPR000847 Transcription regulator HTH, LysR BED35_03030 IPR005119 LysR, substrate-binding BED35_03030 IPR036388 BED35_03030 BED35_03030 IPR036390 BED35_03030 BED35_03035 IPR012451 Protein of unknown function DUF1656 BED35_03040 IPR006143 RND efflux pump, membrane fusion protein BED35_03040 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA BED35_03040 IPR039562 BED35_03040 BED35_03045 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein BED35_03045 IPR023706 Para-hydroxybenzoic acid efflux pump, subunit AaeB BED35_03050 IPR010102 Succinate semialdehyde dehydrogenase BED35_03050 IPR015590 Aldehyde dehydrogenase domain BED35_03050 IPR016160 Aldehyde dehydrogenase, cysteine active site BED35_03050 IPR016161 Aldehyde/histidinol dehydrogenase BED35_03050 IPR016162 Aldehyde dehydrogenase, N-terminal BED35_03050 IPR016163 Aldehyde dehydrogenase, C-terminal BED35_03050 IPR029510 Aldehyde dehydrogenase, glutamic acid active site BED35_03055 IPR000026 Guanine-specific ribonuclease N1/T1 BED35_03055 IPR001887 Barnase BED35_03055 IPR016191 Ribonuclease/ribotoxin BED35_03060 IPR000468 Barstar (barnase inhibitor) BED35_03060 IPR035905 BED35_03060 BED35_03065 IPR006839 Ribosome-associated, YjgA BED35_03065 IPR023153 PSPTO4464-like domain BED35_03070 IPR002104 Integrase, catalytic BED35_03070 IPR010998 Integrase, Lambda-type, N-terminal BED35_03070 IPR011010 DNA breaking-rejoining enzyme, catalytic core BED35_03070 IPR013762 Integrase-like, catalytic core BED35_03075 IPR010982 Lambda repressor-like, DNA-binding domain BED35_03080 IPR038147 BED35_03080 BED35_03100 IPR002052 DNA methylase, N-6 adenine-specific, conserved site BED35_03100 IPR012263 Adenine modification methylase, M.EcoRV-type BED35_03100 IPR012327 D12 class N6 adenine-specific DNA methyltransferase BED35_03100 IPR023095 Adenine-specific methyltransferase, domain 2 BED35_03100 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BED35_03105 IPR002500 Phosphoadenosine phosphosulphate reductase BED35_03110 IPR008766 Replication gene A protein BED35_03115 IPR007684 Zinc finger, Ogr/Delta-type BED35_03125 IPR004921 Terminase, large subunit BED35_03125 IPR010332 ATPase terminase subunit, putative BED35_03125 IPR035421 BED35_03125 BED35_03130 IPR009228 Capsid scaffolding protein GpO BED35_03135 IPR006441 Bacteriophage P2, GpN, major capsid BED35_03140 IPR010270 Bacteriophage P2, GpM BED35_03145 IPR009225 Bacteriophage head completion protein GpL BED35_03150 IPR009678 Bacteriophage tail completion protein R BED35_03165 IPR019708 Bacteriophage HP1, Orf24 BED35_03170 IPR007633 Bacteriophage P2, GpY, holin BED35_03175 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain BED35_03175 IPR039561 BED35_03175 BED35_03185 IPR024406 Protein of unknown function DUF2765 BED35_03190 IPR010090 Phage tail tape measure protein BED35_03195 IPR019697 Bacteriophage HP1, Orf28 BED35_03200 IPR006949 Baseplate assembly protein J-like, predicted BED35_03215 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly BED35_03240 IPR026001 Abortive infection protein-like, C-terminal domain BED35_03245 IPR002510 TldD/PmbA BED35_03245 IPR035068 BED35_03245 BED35_03245 IPR036059 BED35_03245 BED35_03250 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED35_03250 IPR003346 Transposase, IS116/IS110/IS902 BED35_03255 IPR009155 Cytochrome b562 BED35_03255 IPR010980 Cytochrome c/b562 BED35_03260 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal BED35_03260 IPR023459 Transcription elongation factor GreA/GreB family BED35_03260 IPR028625 Regulator of nucleoside diphosphate kinase BED35_03260 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain BED35_03260 IPR036953 BED35_03260 BED35_03265 IPR011608 PRD domain BED35_03265 IPR020044 PRD domain protein, EF0829/AHA3910 BED35_03265 IPR036634 BED35_03265 BED35_03270 IPR020034 Conserved hypothetical protein CHP03577, EF0830/AHA3911 BED35_03275 IPR020037 Protein of unknown function DUF4312 BED35_03280 IPR020042 Protein of unknown function DUF4311 BED35_03285 IPR025456 Protein of unknown function DUF4310 BED35_03290 IPR006680 Amidohydrolase 1 BED35_03290 IPR011059 Metal-dependent hydrolase, composite domain BED35_03290 IPR020043 Amidohydrolase EF0837/AHA3915, putative BED35_03290 IPR032466 BED35_03290 BED35_03295 IPR006337 Pyridoxal phosphate-dependent enzyme, SelA-like BED35_03295 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BED35_03295 IPR015424 Pyridoxal phosphate-dependent transferase BED35_03295 IPR018319 L-seryl-tRNA selenium transferase-like BED35_03300 IPR010763 Protein of unknown function DUF1341 BED35_03300 IPR013785 Aldolase-type TIM barrel BED35_03310 IPR002178 PTS EIIA type-2 domain BED35_03310 IPR007737 Mga helix-turn-helix domain BED35_03310 IPR011608 PRD domain BED35_03310 IPR013196 Helix-turn-helix, type 11 BED35_03310 IPR016152 Phosphotransferase/anion transporter BED35_03310 IPR036095 BED35_03310 BED35_03310 IPR036388 BED35_03310 BED35_03310 IPR036634 BED35_03310 BED35_03315 IPR001387 Cro/C1-type helix-turn-helix domain BED35_03315 IPR010982 Lambda repressor-like, DNA-binding domain BED35_03315 IPR013430 Toxin-antitoxin system, antidote protein, HigA BED35_03320 IPR007711 Plasmid maintenance system killer BED35_03320 IPR035093 BED35_03320 BED35_03330 IPR000843 Transcription regulator HTH, LacI BED35_03330 IPR010982 Lambda repressor-like, DNA-binding domain BED35_03330 IPR012771 Trehalose operon repressor BED35_03330 IPR028082 Periplasmic binding protein-like I BED35_03340 IPR006047 Glycosyl hydrolase, family 13, catalytic domain BED35_03340 IPR012769 Trehalose-6-phosphate hydrolase BED35_03340 IPR013780 Glycosyl hydrolase, family 13, all-beta BED35_03340 IPR017853 Glycoside hydrolase, superfamily BED35_03340 IPR022567 Domain of unknown function DUF3459 BED35_03345 IPR001353 Proteasome, subunit alpha/beta BED35_03345 IPR016545 Uncharacterised conserved protein UCP009120, proteasome-type protease, Sll0069 BED35_03345 IPR029055 Nucleophile aminohydrolases, N-terminal BED35_03350 IPR002931 Transglutaminase-like BED35_03350 IPR013589 Bacterial transglutaminase-like, N-terminal BED35_03350 IPR038765 BED35_03350 BED35_03355 IPR007296 Domain of unknown function DUF403 BED35_03360 IPR016450 Uncharacterised conserved protein UCP005522 BED35_03360 IPR025841 Circularly permuted ATP-grasp type 2 BED35_03365 IPR006056 Enamine/imine deaminase YjgF-like BED35_03365 IPR006175 YjgF/Yer057p/UK114 family BED35_03365 IPR019897 YjgF-like protein, conserved site BED35_03365 IPR035959 BED35_03365 BED35_03370 IPR002801 Aspartate transcarbamylase regulatory subunit BED35_03370 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal BED35_03370 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal BED35_03370 IPR036792 BED35_03370 BED35_03370 IPR036793 BED35_03370 BED35_03375 IPR002082 Aspartate carbamoyltransferase BED35_03375 IPR006130 Aspartate/ornithine carbamoyltransferase BED35_03375 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain BED35_03375 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding BED35_03375 IPR036901 BED35_03375 BED35_03380 IPR000032 Phosphocarrier HPr protein-like BED35_03380 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site BED35_03380 IPR035895 BED35_03380 BED35_03385 IPR005337 ATPase, P-loop-containing BED35_03385 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_03390 IPR002178 PTS EIIA type-2 domain BED35_03390 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN BED35_03390 IPR016152 Phosphotransferase/anion transporter BED35_03395 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein BED35_03395 IPR036567 BED35_03395 BED35_03400 IPR000394 RNA polymerase sigma factor 54 BED35_03400 IPR007046 RNA polymerase sigma factor 54, core-binding BED35_03400 IPR007634 RNA polymerase sigma factor 54, DNA-binding BED35_03400 IPR038709 BED35_03400 BED35_03405 IPR003439 ABC transporter-like BED35_03405 IPR003593 AAA+ ATPase domain BED35_03405 IPR017871 ABC transporter, conserved site BED35_03405 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_03405 IPR030921 BED35_03405 BED35_03405 IPR032823 BED35_03405 BED35_03410 IPR005653 Organic solvent tolerance-like, N-terminal BED35_03410 IPR014340 Lipopolysaccharide assembly, LptA BED35_03415 IPR010664 Lipopolysaccharide assembly, LptC-related BED35_03415 IPR026265 Lipopolysaccharide export system protein LptC BED35_03420 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase BED35_03420 IPR023214 HAD-like domain BED35_03420 IPR036412 BED35_03420 BED35_03425 IPR000644 CBS domain BED35_03425 IPR001347 Sugar isomerase (SIS) BED35_03425 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type BED35_03435 IPR003439 ABC transporter-like BED35_03435 IPR003593 AAA+ ATPase domain BED35_03435 IPR017871 ABC transporter, conserved site BED35_03435 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_03440 IPR003453 Permease domain BED35_03440 IPR030802 BED35_03440 BED35_03445 IPR003399 Mammalian cell entry-related BED35_03445 IPR030970 BED35_03445 BED35_03450 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC BED35_03455 IPR002645 STAS domain BED35_03455 IPR036513 BED35_03455 BED35_03460 IPR002634 BolA protein BED35_03460 IPR036065 BED35_03460 BED35_03465 IPR001986 Enolpyruvate transferase domain BED35_03465 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase BED35_03465 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta BED35_03465 IPR036968 BED35_03465 BED35_03470 IPR001478 PDZ domain BED35_03470 IPR001940 Peptidase S1C BED35_03470 IPR009003 Trypsin-like cysteine/serine peptidase domain BED35_03470 IPR011783 Peptidase S1C, DegS BED35_03470 IPR036034 BED35_03470 BED35_03475 IPR001478 PDZ domain BED35_03475 IPR001940 Peptidase S1C BED35_03475 IPR009003 Trypsin-like cysteine/serine peptidase domain BED35_03475 IPR011782 Peptidase S1C, Do BED35_03475 IPR036034 BED35_03475 BED35_03480 IPR009386 Protein of unknown function DUF1043 BED35_03485 IPR005654 ATPase, AFG1-like BED35_03485 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_03485 IPR030870 BED35_03485 BED35_03490 IPR005822 Ribosomal protein L13 BED35_03490 IPR005823 Ribosomal protein L13, bacterial-type BED35_03490 IPR023563 Ribosomal protein L13, conserved site BED35_03490 IPR036899 BED35_03490 BED35_03495 IPR000754 Ribosomal protein S9 BED35_03495 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BED35_03495 IPR020568 Ribosomal protein S5 domain 2-type fold BED35_03495 IPR020574 Ribosomal protein S9, conserved site BED35_03495 IPR023035 Ribosomal protein S9, bacterial/plastid BED35_03500 IPR004045 Glutathione S-transferase, N-terminal BED35_03500 IPR004046 Glutathione S-transferase, C-terminal BED35_03500 IPR036249 BED35_03500 BED35_03500 IPR036282 BED35_03500 BED35_03505 IPR007481 Stringent starvation protein B BED35_03505 IPR036760 BED35_03505 BED35_03520 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 BED35_03520 IPR009051 Alpha-helical ferredoxin BED35_03520 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain BED35_03520 IPR028261 Dihydroprymidine dehydrogenase domain II BED35_03520 IPR036188 BED35_03520 BED35_03525 IPR002489 Glutamate synthase, alpha subunit, C-terminal BED35_03525 IPR002932 Glutamate synthase domain BED35_03525 IPR006982 Glutamate synthase, central-N BED35_03525 IPR013785 Aldolase-type TIM barrel BED35_03525 IPR017932 Glutamine amidotransferase type 2 domain BED35_03525 IPR029055 Nucleophile aminohydrolases, N-terminal BED35_03525 IPR036485 BED35_03525 BED35_03530 IPR005911 Conserved hypothetical protein CHP01212 BED35_03530 IPR006638 Elongator protein 3/MiaB/NifB BED35_03530 IPR007197 Radical SAM BED35_03530 IPR023404 Radical SAM, alpha/beta horseshoe BED35_03530 IPR032432 BED35_03530 BED35_03535 IPR000014 PAS domain BED35_03535 IPR001789 Signal transduction response regulator, receiver domain BED35_03535 IPR003594 Histidine kinase-like ATPase, C-terminal domain BED35_03535 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain BED35_03535 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BED35_03535 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain BED35_03535 IPR011006 CheY-like superfamily BED35_03535 IPR013767 PAS fold BED35_03535 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB BED35_03535 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain BED35_03535 IPR035965 BED35_03535 BED35_03535 IPR036097 BED35_03535 BED35_03535 IPR036641 BED35_03535 BED35_03535 IPR036890 BED35_03535 BED35_03540 IPR026041 Enhancing lycopene biosynthesis protein 2 BED35_03540 IPR029062 Class I glutamine amidotransferase-like BED35_03545 IPR001264 Glycosyl transferase, family 51 BED35_03545 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase BED35_03545 IPR023346 Lysozyme-like domain BED35_03545 IPR036950 BED35_03545 BED35_03550 IPR007055 BON domain BED35_03550 IPR014004 Transport-associated and nodulation domain, bacteria BED35_03555 IPR001347 Sugar isomerase (SIS) BED35_03555 IPR023070 DnaA initiator-associating protein BED35_03560 IPR003509 Uncharacterised protein family UPF0102 BED35_03560 IPR011335 Restriction endonuclease type II-like BED35_03560 IPR011856 tRNA endonuclease-like domain BED35_03565 IPR007443 Penicillin-binding protein activator LpoA BED35_03565 IPR011990 Tetratricopeptide-like helical domain BED35_03565 IPR028082 Periplasmic binding protein-like I BED35_03570 IPR000878 Tetrapyrrole methylase BED35_03570 IPR008189 rRNA small subunit methyltransferase I BED35_03570 IPR014776 Tetrapyrrole methylase, subdomain 2 BED35_03570 IPR014777 Tetrapyrrole methylase, subdomain 1 BED35_03570 IPR018063 SAM-dependent methyltransferase RsmI, conserved site BED35_03570 IPR035996 BED35_03570 BED35_03590 IPR006118 Recombinase, conserved site BED35_03590 IPR006119 Resolvase, N-terminal BED35_03590 IPR036162 BED35_03590 BED35_03600 IPR001525 C-5 cytosine methyltransferase BED35_03600 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BED35_03610 IPR001387 Cro/C1-type helix-turn-helix domain BED35_03610 IPR010982 Lambda repressor-like, DNA-binding domain BED35_03620 IPR008966 Adhesion domain BED35_03620 IPR036937 BED35_03620 BED35_03620 IPR039458 BED35_03620 BED35_03625 IPR001829 Pili assembly chaperone, bacterial BED35_03625 IPR008962 PapD-like BED35_03625 IPR013783 Immunoglobulin-like fold BED35_03625 IPR016147 PapD, N-terminal, bacterial BED35_03625 IPR016148 Pili assembly chaperone, C-terminal domain BED35_03625 IPR018046 Pili assembly chaperone, conserved site BED35_03625 IPR036316 BED35_03625 BED35_03630 IPR000015 Outer membrane usher protein BED35_03630 IPR025885 PapC, N-terminal domain BED35_03630 IPR025949 PapC-like, C-terminal domain BED35_03630 IPR037224 BED35_03630 BED35_03635 IPR008966 Adhesion domain BED35_03635 IPR036937 BED35_03635 BED35_03640 IPR000847 Transcription regulator HTH, LysR BED35_03640 IPR005119 LysR, substrate-binding BED35_03640 IPR036388 BED35_03640 BED35_03640 IPR036390 BED35_03640 BED35_03645 IPR023210 NADP-dependent oxidoreductase domain BED35_03645 IPR036812 BED35_03645 BED35_03650 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site BED35_03650 IPR011032 GroES (chaperonin 10)-like BED35_03650 IPR013149 Alcohol dehydrogenase, C-terminal BED35_03650 IPR013154 Alcohol dehydrogenase GroES-like BED35_03650 IPR020843 Polyketide synthase, enoylreductase BED35_03650 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 BED35_03650 IPR036291 BED35_03650 BED35_03655 IPR003829 Pirin, N-terminal domain BED35_03655 IPR011051 RmlC-like cupin domain BED35_03655 IPR012093 Pirin BED35_03655 IPR014710 RmlC-like jelly roll fold BED35_03660 IPR000847 Transcription regulator HTH, LysR BED35_03660 IPR005119 LysR, substrate-binding BED35_03660 IPR036388 BED35_03660 BED35_03660 IPR036390 BED35_03660 BED35_03665 IPR004045 Glutathione S-transferase, N-terminal BED35_03665 IPR016639 Glutathione S-transferase (GST) BED35_03665 IPR036249 BED35_03665 BED35_03665 IPR036282 BED35_03665 BED35_03670 IPR032808 BED35_03670 BED35_03675 IPR025612 YqjK-like protein BED35_03680 IPR009937 Protein of unknown function DUF1469 BED35_03685 IPR010279 Protein of unknown function DUF883, ElaB BED35_03690 IPR009468 Protein of unknown function DUF1090 BED35_03695 IPR026574 Modulator protein MzrA BED35_03695 IPR027398 SecD export protein N-terminal TM domain BED35_03700 IPR032816 BED35_03700 BED35_03710 IPR000524 Transcription regulator HTH, GntR BED35_03710 IPR008920 Transcription regulator FadR/GntR, C-terminal BED35_03710 IPR011711 GntR, C-terminal BED35_03710 IPR036388 BED35_03710 BED35_03710 IPR036390 BED35_03710 BED35_03715 IPR011701 Major facilitator superfamily BED35_03715 IPR036259 BED35_03715 BED35_03720 IPR003766 Uronate isomerase BED35_03720 IPR032466 BED35_03720 BED35_03725 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like BED35_03725 IPR013118 Mannitol dehydrogenase, C-terminal BED35_03725 IPR013131 Mannitol dehydrogenase, N-terminal BED35_03725 IPR013328 Dehydrogenase, multihelical BED35_03725 IPR036291 BED35_03725 BED35_03730 IPR007392 D-galactarate dehydratase/Altronate hydrolase, C-terminal BED35_03730 IPR013974 SAF domain BED35_03735 IPR019629 Uncharacterised protein family HI1736/YgjV BED35_03735 IPR026267 Inner membrane protein YgjV BED35_03740 IPR001991 Sodium:dicarboxylate symporter BED35_03740 IPR023025 Serine/threonine transporter SstT BED35_03740 IPR036458 BED35_03740 BED35_03745 IPR005496 Integral membrane protein TerC BED35_03745 IPR022369 Integral membrane protein TerC, riboswitch-linked BED35_03755 IPR000683 Oxidoreductase, N-terminal BED35_03755 IPR036291 BED35_03755 BED35_03760 IPR002725 Protein of unknown function DUF45 BED35_03765 IPR005546 Autotransporter beta-domain BED35_03765 IPR006315 Outer membrane autotransporter barrel BED35_03765 IPR036709 BED35_03765 BED35_03775 IPR005546 Autotransporter beta-domain BED35_03775 IPR006315 Outer membrane autotransporter barrel BED35_03775 IPR011050 Pectin lyase fold/virulence factor BED35_03775 IPR012332 P22 tailspike C-terminal domain-like BED35_03775 IPR030930 BED35_03775 BED35_03775 IPR036709 BED35_03775 BED35_03780 IPR002052 DNA methylase, N-6 adenine-specific, conserved site BED35_03780 IPR007848 Methyltransferase small domain BED35_03780 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD BED35_03780 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BED35_03785 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED35_03785 IPR003346 Transposase, IS116/IS110/IS902 BED35_03790 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal BED35_03790 IPR013785 Aldolase-type TIM barrel BED35_03790 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain BED35_03790 IPR036188 BED35_03790 BED35_03795 IPR000620 Drug/metabolite transporter BED35_03800 IPR005325 Protein of unknown function DUF308, membrane BED35_03810 IPR002129 Pyridoxal phosphate-dependent decarboxylase BED35_03810 IPR010107 Glutamate decarboxylase BED35_03810 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BED35_03810 IPR015424 Pyridoxal phosphate-dependent transferase BED35_03810 IPR021115 Pyridoxal-phosphate binding site BED35_03815 IPR002293 Amino acid/polyamine transporter I BED35_03815 IPR022520 Putative glutamate/gamma-aminobutyrate antiporter BED35_03820 IPR012338 Beta-lactamase/transpeptidase-like BED35_03820 IPR015868 Glutaminase BED35_03830 IPR001207 Transposase, mutator type BED35_03835 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site BED35_03835 IPR036878 BED35_03835 BED35_03840 IPR001347 Sugar isomerase (SIS) BED35_03840 IPR005486 Glucokinase regulatory protein, conserved site BED35_03840 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ BED35_03845 IPR000281 Helix-turn-helix protein RpiR BED35_03845 IPR001347 Sugar isomerase (SIS) BED35_03845 IPR009057 Homeodomain-like BED35_03845 IPR036388 BED35_03845 BED35_03850 IPR001764 Glycoside hydrolase, family 3, N-terminal BED35_03850 IPR017853 Glycoside hydrolase, superfamily BED35_03850 IPR019800 Glycoside hydrolase, family 3, active site BED35_03850 IPR036881 BED35_03850 BED35_03850 IPR036962 BED35_03850 BED35_03860 IPR008302 Uncharacterised conserved protein UCP016719 BED35_03870 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED35_03870 IPR003346 Transposase, IS116/IS110/IS902 BED35_03875 IPR000943 RNA polymerase sigma-70 BED35_03875 IPR007127 RNA polymerase sigma factor 70, region 1.1 BED35_03875 IPR007624 RNA polymerase sigma-70 region 3 BED35_03875 IPR007627 RNA polymerase sigma-70 region 2 BED35_03875 IPR007630 RNA polymerase sigma-70 region 4 BED35_03875 IPR007631 RNA polymerase sigma factor 70, non-essential domain BED35_03875 IPR009042 RNA polymerase sigma-70 region 1.2 BED35_03875 IPR012760 RNA polymerase sigma factor RpoD, C-terminal BED35_03875 IPR013324 RNA polymerase sigma factor, region 3/4 BED35_03875 IPR013325 RNA polymerase sigma factor, region 2 BED35_03875 IPR014284 RNA polymerase sigma-70 like domain BED35_03875 IPR028630 RNA polymerase sigma factor RpoD BED35_03875 IPR036388 BED35_03875 BED35_03880 IPR002694 Zinc finger, CHC2-type BED35_03880 IPR006171 Toprim domain BED35_03880 IPR006295 DNA primase, DnaG BED35_03880 IPR013173 DNA primase DnaG, DnaB-binding domain BED35_03880 IPR013264 DNA primase, catalytic core, N-terminal BED35_03880 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal BED35_03880 IPR019475 DNA primase, DnaB-helicase binding domain BED35_03880 IPR030846 BED35_03880 BED35_03880 IPR036977 BED35_03880 BED35_03880 IPR037068 BED35_03880 BED35_03885 IPR001911 Ribosomal protein S21 BED35_03885 IPR018278 Ribosomal protein S21, conserved site BED35_03885 IPR038380 BED35_03885 BED35_03890 IPR000905 Gcp-like domain BED35_03890 IPR017860 Peptidase M22, conserved site BED35_03890 IPR017861 Kae1/YgjD family BED35_03890 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD BED35_03895 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY BED35_03900 IPR006156 Dihydroneopterin aldolase BED35_03900 IPR006157 Dihydroneopterin aldolase/epimerase domain BED35_03905 IPR003824 Undecaprenyl-diphosphatase UppP BED35_03910 IPR002646 Poly A polymerase, head domain BED35_03910 IPR003607 HD/PDEase domain BED35_03910 IPR006674 HD domain BED35_03910 IPR012006 tRNA nucleotidyltransferase, proteobacteria BED35_03910 IPR032828 BED35_03910 BED35_03915 IPR003646 SH3-like domain, bacterial-type BED35_03915 IPR016476 SH3 domain protein BED35_03920 IPR023577 CYTH-like domain BED35_03920 IPR033469 BED35_03920 BED35_03925 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain BED35_03925 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase BED35_03925 IPR023057 Glutamate-ammonia-ligase adenylyltransferase BED35_03930 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site BED35_03930 IPR004821 Cytidyltransferase-like domain BED35_03930 IPR011611 Carbohydrate kinase PfkB BED35_03930 IPR011913 RfaE bifunctional protein, domain I BED35_03930 IPR011914 RfaE bifunctional protein, domain II BED35_03930 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED35_03930 IPR023030 Bifunctional protein HldE BED35_03930 IPR029056 Ribokinase-like BED35_03935 IPR002293 Amino acid/polyamine transporter I BED35_03940 IPR007475 Membrane fusogenic activity BED35_03945 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB BED35_03945 IPR017945 DHBP synthase RibB-like alpha/beta domain BED35_03950 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B BED35_03950 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA type BED35_03955 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain BED35_03955 IPR016185 Pre-ATP-grasp domain BED35_03960 IPR009576 Biofilm formation YgiB BED35_03970 IPR003423 Outer membrane efflux protein BED35_03970 IPR010130 Type I secretion outer membrane protein, TolC BED35_03975 IPR000086 NUDIX hydrolase domain BED35_03975 IPR004385 Nucleoside diphosphate pyrophosphatase BED35_03975 IPR015797 NUDIX hydrolase domain-like BED35_03975 IPR020084 NUDIX hydrolase, conserved site BED35_03980 IPR009659 Protein of unknown function DUF1249 BED35_03985 IPR004843 Calcineurin-like phosphoesterase domain, apaH type BED35_03985 IPR013622 Calcineurin-like phosphoesterase C-terminal BED35_03985 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA BED35_03985 IPR029052 Metallo-dependent phosphatase-like BED35_03990 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA BED35_03990 IPR029058 Alpha/Beta hydrolase fold BED35_03995 IPR001241 DNA topoisomerase, type IIA BED35_03995 IPR002288 DNA gyrase B subunit, C-terminal BED35_03995 IPR003594 Histidine kinase-like ATPase, C-terminal domain BED35_03995 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative BED35_03995 IPR006171 Toprim domain BED35_03995 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 BED35_03995 IPR013759 DNA topoisomerase, type IIA, central domain BED35_03995 IPR013760 DNA topoisomerase, type IIA-like domain BED35_03995 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BED35_03995 IPR018522 DNA topoisomerase, type IIA, conserved site BED35_03995 IPR020568 Ribosomal protein S5 domain 2-type fold BED35_03995 IPR036890 BED35_03995 BED35_04000 IPR000847 Transcription regulator HTH, LysR BED35_04000 IPR005119 LysR, substrate-binding BED35_04000 IPR036388 BED35_04000 BED35_04000 IPR036390 BED35_04000 BED35_04005 IPR007138 Antibiotic biosynthesis monooxygenase-like domain BED35_04005 IPR011008 Dimeric alpha-beta barrel BED35_04010 IPR003680 Flavodoxin-like fold BED35_04010 IPR029039 Flavoprotein-like BED35_04015 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal BED35_04015 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative BED35_04015 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel BED35_04015 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain BED35_04015 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta BED35_04015 IPR013760 DNA topoisomerase, type IIA-like domain BED35_04015 IPR035516 BED35_04015 BED35_04020 IPR002123 Phospholipid/glycerol acyltransferase BED35_04020 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase BED35_04025 IPR001117 Multicopper oxidase, type 1 BED35_04025 IPR008972 Cupredoxin BED35_04025 IPR011706 Multicopper oxidase, type 2 BED35_04025 IPR011707 Multicopper oxidase, type 3 BED35_04025 IPR026589 Cell division protein FtsP BED35_04030 IPR006638 Elongator protein 3/MiaB/NifB BED35_04030 IPR007197 Radical SAM BED35_04030 IPR013704 Uncharacterised protein family UPF0313, N-terminal BED35_04030 IPR020612 Methylthiotransferase, conserved site BED35_04030 IPR022946 Uncharacterised protein family UPF0313 BED35_04030 IPR023404 Radical SAM, alpha/beta horseshoe BED35_04030 IPR024560 Uncharacterised protein family UPF0313, C-terminal BED35_04035 IPR018170 Aldo/keto reductase, conserved site BED35_04035 IPR020471 Aldo/keto reductase subgroup BED35_04035 IPR023210 NADP-dependent oxidoreductase domain BED35_04035 IPR036812 BED35_04035 BED35_04040 IPR001670 Alcohol dehydrogenase, iron-type BED35_04040 IPR018211 Alcohol dehydrogenase, iron-type, conserved site BED35_04045 IPR009057 Homeodomain-like BED35_04045 IPR009594 Transcription regulator HTH, AraC, N-terminal BED35_04045 IPR018060 DNA binding HTH domain, AraC-type BED35_04050 IPR032816 BED35_04050 BED35_04055 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme BED35_04055 IPR006233 Cystathionine beta-lyase, bacterial BED35_04055 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BED35_04055 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 BED35_04055 IPR015424 Pyridoxal phosphate-dependent transferase BED35_04060 IPR002898 MotA/TolQ/ExbB proton channel BED35_04060 IPR014164 TonB-system energizer ExbB type-1 BED35_04065 IPR003400 Biopolymer transport protein ExbD/TolR BED35_04065 IPR014170 TonB system transport protein ExbD type-1 BED35_04070 IPR002035 von Willebrand factor, type A BED35_04070 IPR036465 BED35_04070 BED35_04075 IPR031582 BED35_04075 BED35_04080 IPR012495 TadE-like BED35_04085 IPR011990 Tetratricopeptide-like helical domain BED35_04095 IPR018076 Type II secretion system F domain BED35_04100 IPR001482 Type II secretion system protein E BED35_04100 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_04105 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_04115 IPR001775 GspD/PilQ family BED35_04115 IPR004846 Type II/III secretion system BED35_04115 IPR032789 BED35_04115 BED35_04125 IPR000045 Prepilin type IV endopeptidase, peptidase domain BED35_04135 IPR001867 Signal transduction response regulator, C-terminal BED35_04135 IPR016032 Signal transduction response regulator, C-terminal effector BED35_04135 IPR036388 BED35_04135 BED35_04140 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like BED35_04140 IPR037151 BED35_04140 BED35_04145 IPR001036 Acriflavin resistance protein BED35_04150 IPR001584 Integrase, catalytic core BED35_04150 IPR012337 Ribonuclease H-like domain BED35_04165 IPR036526 BED35_04165 BED35_04170 IPR009057 Homeodomain-like BED35_04170 IPR018060 DNA binding HTH domain, AraC-type BED35_04170 IPR018062 HTH domain AraC-type, conserved site BED35_04175 IPR002514 Transposase IS3/IS911family BED35_04175 IPR009057 Homeodomain-like BED35_04185 IPR003423 Outer membrane efflux protein BED35_04195 IPR003439 ABC transporter-like BED35_04195 IPR003593 AAA+ ATPase domain BED35_04195 IPR017871 ABC transporter, conserved site BED35_04195 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_04210 IPR001584 Integrase, catalytic core BED35_04210 IPR012337 Ribonuclease H-like domain BED35_04210 IPR036397 BED35_04210 BED35_04215 IPR002514 Transposase IS3/IS911family BED35_04215 IPR009057 Homeodomain-like BED35_04225 IPR000801 Putative esterase BED35_04225 IPR013783 Immunoglobulin-like fold BED35_04225 IPR014756 Immunoglobulin E-set BED35_04225 IPR021764 Enterochelin esterase, N-terminal BED35_04225 IPR029058 Alpha/Beta hydrolase fold BED35_04230 IPR003439 ABC transporter-like BED35_04230 IPR003593 AAA+ ATPase domain BED35_04230 IPR017871 ABC transporter, conserved site BED35_04230 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_04235 IPR000522 ABC transporter, permease protein BED35_04235 IPR037294 BED35_04235 BED35_04240 IPR000522 ABC transporter, permease protein BED35_04240 IPR037294 BED35_04240 BED35_04245 IPR002491 ABC transporter periplasmic binding domain BED35_04255 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain BED35_04255 IPR036291 BED35_04255 BED35_04260 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding BED35_04260 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BED35_04260 IPR004090 Chemotaxis methyl-accepting receptor BED35_04260 IPR035440 BED35_04260 BED35_04270 IPR001712 Type III secretion system FHIPEP BED35_04270 IPR025505 FHIPEP conserved site BED35_04275 IPR006135 Type III secretion system substrate exporter BED35_04275 IPR006136 Type III exporter system, flagellar biosynthetic protein FlhB BED35_04275 IPR029025 Type III secretion system substrate exporter, C-terminal BED35_04280 IPR002010 Type III secretion system inner membrane R protein BED35_04280 IPR006303 Flagellar biosynthesis protein FliR BED35_04285 IPR002191 Bacterial export protein family 3 BED35_04285 IPR006305 Flagellar biosynthesis protein FliQ BED35_04290 IPR005837 Flagellar transport protein FliP BED35_04290 IPR005838 Type III secretion system inner membrane P protein BED35_04295 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb BED35_04295 IPR001543 Surface presentation of antigen (SpoA) BED35_04295 IPR036429 BED35_04295 BED35_04300 IPR001543 Surface presentation of antigen (SpoA) BED35_04300 IPR036429 BED35_04300 BED35_04305 IPR002078 RNA polymerase sigma factor 54 interaction domain BED35_04305 IPR002197 DNA binding HTH domain, Fis-type BED35_04305 IPR003593 AAA+ ATPase domain BED35_04305 IPR009057 Homeodomain-like BED35_04305 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BED35_04305 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BED35_04305 IPR025944 Sigma-54 interaction domain, conserved site BED35_04305 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_04310 IPR001624 Flagellar hook-basal body complex protein FliE BED35_04320 IPR000090 Flagellar motor switch protein FliG BED35_04320 IPR011002 Flagellar motor switch protein FliG, alpha-helical BED35_04320 IPR023087 BED35_04320 BED35_04320 IPR028263 Flagellar motor switch protein FliG, N-terminal domain BED35_04320 IPR032779 BED35_04320 BED35_04325 IPR000563 Flagellar assembly protein FliH BED35_04325 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE BED35_04325 IPR019191 Essential protein Yae1, N-terminal BED35_04330 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain BED35_04330 IPR003593 AAA+ ATPase domain BED35_04330 IPR005714 ATPase, type III secretion system, FliI/YscN BED35_04330 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site BED35_04330 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_04335 IPR012823 Flagellar export FliJ BED35_04340 IPR007809 FlgN-like domain BED35_04340 IPR036679 BED35_04340 BED35_04345 IPR007412 Anti-sigma-28 factor, FlgM BED35_04345 IPR031316 BED35_04345 BED35_04345 IPR035890 BED35_04345 BED35_04350 IPR013974 SAF domain BED35_04350 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal BED35_04355 IPR001444 Flagellar basal body rod protein, N-terminal BED35_04355 IPR006300 Flagellar basal-body rod protein FlgB BED35_04355 IPR019776 Flagellar basal body rod protein, conserved site BED35_04360 IPR001444 Flagellar basal body rod protein, N-terminal BED35_04360 IPR006299 Flagellar basal-body rod protein FlgC BED35_04360 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BED35_04360 IPR019776 Flagellar basal body rod protein, conserved site BED35_04365 IPR005648 Flagellar hook capping protein BED35_04365 IPR025963 FlgD Tudor-like domain BED35_04365 IPR025965 FlgD Ig-like domain BED35_04370 IPR001444 Flagellar basal body rod protein, N-terminal BED35_04370 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BED35_04370 IPR011491 Flagellar basal body FlaE BED35_04370 IPR020013 Fagellar hook-basal body protein, FlgE/F/G BED35_04370 IPR037058 BED35_04370 BED35_04370 IPR037925 BED35_04370 BED35_04375 IPR001444 Flagellar basal body rod protein, N-terminal BED35_04375 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BED35_04375 IPR012836 Flagellar basal-body rod FlgF BED35_04375 IPR020013 Fagellar hook-basal body protein, FlgE/F/G BED35_04375 IPR037925 BED35_04375 BED35_04380 IPR001444 Flagellar basal body rod protein, N-terminal BED35_04380 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BED35_04380 IPR012834 Flagellar basal-body rod FlgG BED35_04380 IPR019776 Flagellar basal body rod protein, conserved site BED35_04380 IPR020013 Fagellar hook-basal body protein, FlgE/F/G BED35_04380 IPR037925 BED35_04380 BED35_04385 IPR000527 Flagellar L-ring protein BED35_04390 IPR001782 Flagellar P-ring protein BED35_04395 IPR019301 Flagellar protein FlgJ, N-terminal BED35_04400 IPR001444 Flagellar basal body rod protein, N-terminal BED35_04400 IPR002371 Flagellar hook-associated protein, FlgK BED35_04400 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BED35_04405 IPR001029 Flagellin, D0/D1 domain BED35_04425 IPR001029 Flagellin, D0/D1 domain BED35_04425 IPR001492 Flagellin BED35_04435 IPR003713 Flagellar protein FliS BED35_04435 IPR036584 BED35_04435 BED35_04450 IPR005503 Flagellar basal body-associated protein FliL BED35_04455 IPR007624 RNA polymerase sigma-70 region 3 BED35_04455 IPR007627 RNA polymerase sigma-70 region 2 BED35_04455 IPR007630 RNA polymerase sigma-70 region 4 BED35_04455 IPR012845 RNA polymerase sigma factor, FliA/WhiG BED35_04455 IPR013324 RNA polymerase sigma factor, region 3/4 BED35_04455 IPR013325 RNA polymerase sigma factor, region 2 BED35_04455 IPR014284 RNA polymerase sigma-70 like domain BED35_04460 IPR000540 Flagellar motor protein MotA, conserved site BED35_04460 IPR002898 MotA/TolQ/ExbB proton channel BED35_04460 IPR022522 Flagellar motor stator, MotA BED35_04465 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal BED35_04465 IPR025713 Motility protein B, N-terminal domain BED35_04465 IPR036737 BED35_04465 BED35_04470 IPR008816 Glycine zipper 2TM domain BED35_04475 IPR001821 [NiFe]-hydrogenase, small subunit BED35_04475 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit BED35_04475 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal BED35_04475 IPR027394 Cytochrome-c3 hydrogenase, C-terminal BED35_04475 IPR037024 BED35_04475 BED35_04475 IPR037148 BED35_04475 BED35_04480 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BED35_04480 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BED35_04490 IPR001501 Nickel-dependent hydrogenase, large subunit BED35_04490 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site BED35_04490 IPR029014 NiFe hydrogenase-like BED35_04495 IPR000671 Peptidase A31 family BED35_04495 IPR004419 Peptidase A31, hydrogenase expression/formation protein BED35_04495 IPR023430 Peptidase HybD-like domain BED35_04500 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE BED35_04500 IPR038530 BED35_04500 BED35_04505 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF BED35_04505 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site BED35_04510 IPR003495 CobW/HypB/UreG domain BED35_04510 IPR004392 Hydrogenase accessory protein HypB BED35_04510 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase BED35_04510 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_04515 IPR001109 Hydrogenase expression/formation protein, HupF/HypC BED35_04515 IPR019812 Hydrogenase assembly chaperone, conserved site BED35_04515 IPR037254 BED35_04515 BED35_04520 IPR002780 Hydrogenase formation HypD protein BED35_04525 IPR010918 AIR synthase-related protein, C-terminal domain BED35_04525 IPR011854 Hydrogenase expression/formation protein HypE BED35_04525 IPR016188 PurM, N-terminal-like BED35_04525 IPR036676 BED35_04525 BED35_04525 IPR036921 BED35_04525 BED35_04530 IPR001792 Acylphosphatase-like domain BED35_04530 IPR004421 Carbamoyltransferase, HypF-type BED35_04530 IPR006070 YrdC-like domain BED35_04530 IPR011125 Zinc finger, HypF-type BED35_04530 IPR017945 DHBP synthase RibB-like alpha/beta domain BED35_04530 IPR017968 Acylphosphatase, conserved site BED35_04530 IPR036046 BED35_04530 BED35_04535 IPR003812 Fido domain BED35_04535 IPR013196 Helix-turn-helix, type 11 BED35_04535 IPR036388 BED35_04535 BED35_04535 IPR036390 BED35_04535 BED35_04535 IPR036597 BED35_04535 BED35_04540 IPR000417 Hydroxyethylthiazole kinase BED35_04540 IPR029056 Ribokinase-like BED35_04550 IPR021747 Protein of unknown function DUF3313 BED35_04555 IPR000014 PAS domain BED35_04555 IPR000160 GGDEF domain BED35_04555 IPR001633 EAL domain BED35_04555 IPR007892 CHASE4 BED35_04555 IPR013767 PAS fold BED35_04555 IPR029787 Nucleotide cyclase BED35_04555 IPR035919 BED35_04555 BED35_04555 IPR035965 BED35_04555 BED35_04560 IPR006143 RND efflux pump, membrane fusion protein BED35_04560 IPR032317 BED35_04560 BED35_04575 IPR004736 Citrate-proton symport BED35_04575 IPR005828 General substrate transporter BED35_04575 IPR005829 Sugar transporter, conserved site BED35_04575 IPR015041 Osmosensory transporter coiled coil BED35_04575 IPR036259 BED35_04575 BED35_04575 IPR036292 BED35_04575 BED35_04585 IPR000868 Isochorismatase-like BED35_04585 IPR036380 BED35_04585 BED35_04590 IPR003841 Sodium-dependent phosphate transport protein BED35_04590 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein BED35_04590 IPR026022 PhoU domain BED35_04590 IPR038078 BED35_04590 BED35_04595 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain BED35_04595 IPR036452 BED35_04595 BED35_04600 IPR000843 Transcription regulator HTH, LacI BED35_04600 IPR001761 Periplasmic binding protein/LacI sugar binding domain BED35_04600 IPR010982 Lambda repressor-like, DNA-binding domain BED35_04600 IPR028082 Periplasmic binding protein-like I BED35_04605 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED35_04605 IPR003346 Transposase, IS116/IS110/IS902 BED35_04610 IPR005828 General substrate transporter BED35_04610 IPR036259 BED35_04610 BED35_04620 IPR000524 Transcription regulator HTH, GntR BED35_04620 IPR004839 Aminotransferase, class I/classII BED35_04620 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BED35_04620 IPR015424 Pyridoxal phosphate-dependent transferase BED35_04620 IPR036388 BED35_04620 BED35_04620 IPR036390 BED35_04620 BED35_04630 IPR001077 O-methyltransferase, family 2 BED35_04630 IPR016461 Caffeate O-methyltransferase (COMT) family BED35_04630 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BED35_04630 IPR036388 BED35_04630 BED35_04630 IPR036390 BED35_04630 BED35_04635 IPR001077 O-methyltransferase, family 2 BED35_04635 IPR016461 Caffeate O-methyltransferase (COMT) family BED35_04635 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BED35_04635 IPR036388 BED35_04635 BED35_04635 IPR036390 BED35_04635 BED35_04640 IPR002491 ABC transporter periplasmic binding domain BED35_04645 IPR000522 ABC transporter, permease protein BED35_04645 IPR037294 BED35_04645 BED35_04650 IPR000522 ABC transporter, permease protein BED35_04650 IPR037294 BED35_04650 BED35_04660 IPR000994 Peptidase M24, structural domain BED35_04660 IPR001714 Peptidase M24, methionine aminopeptidase BED35_04660 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 BED35_04660 IPR036005 BED35_04660 BED35_04665 IPR021831 Protein of unknown function DUF3423 BED35_04675 IPR031381 BED35_04675 BED35_04680 IPR039562 BED35_04680 BED35_04685 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein BED35_04695 IPR000310 Orn/Lys/Arg decarboxylase, major domain BED35_04695 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal BED35_04695 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal BED35_04695 IPR011006 CheY-like superfamily BED35_04695 IPR011193 Ornithine/lysine/arginine decarboxylase BED35_04695 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BED35_04695 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 BED35_04695 IPR015424 Pyridoxal phosphate-dependent transferase BED35_04695 IPR027464 Ornithine decarboxylase, N-terminal domain BED35_04695 IPR027568 Ornithine decarboxylase SpeF BED35_04695 IPR036633 BED35_04695 BED35_04700 IPR002293 Amino acid/polyamine transporter I BED35_04700 IPR004754 Amino acid antiporter BED35_04700 IPR027566 Putrescine-ornithine antiporter BED35_04710 IPR029055 Nucleophile aminohydrolases, N-terminal BED35_04710 IPR029132 Choloylglycine hydrolase/NAAA C-terminal BED35_04720 IPR003220 InsA N-terminal domain BED35_04720 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain BED35_04725 IPR011093 Domain of unknown function DUF1528, C-terminal BED35_04725 IPR011119 Uncharacterised domain, helicase/relaxase, putative BED35_04725 IPR022391 Integrating conjugative element relaxase, PFGI-1 class BED35_04725 IPR036388 BED35_04725 BED35_04725 IPR036390 BED35_04725 BED35_04740 IPR002104 Integrase, catalytic BED35_04740 IPR010998 Integrase, Lambda-type, N-terminal BED35_04740 IPR011010 DNA breaking-rejoining enzyme, catalytic core BED35_04740 IPR013762 Integrase-like, catalytic core BED35_04755 IPR000310 Orn/Lys/Arg decarboxylase, major domain BED35_04755 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal BED35_04755 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal BED35_04755 IPR011006 CheY-like superfamily BED35_04755 IPR011193 Ornithine/lysine/arginine decarboxylase BED35_04755 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BED35_04755 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 BED35_04755 IPR015424 Pyridoxal phosphate-dependent transferase BED35_04755 IPR027464 Ornithine decarboxylase, N-terminal domain BED35_04755 IPR027568 Ornithine decarboxylase SpeF BED35_04755 IPR036633 BED35_04755 BED35_04760 IPR002781 Transmembrane protein TauE like BED35_04765 IPR000189 Prokaryotic transglycosylase, active site BED35_04765 IPR008258 Lytic transglycosylase-like SLT domain BED35_04765 IPR023346 Lysozyme-like domain BED35_04765 IPR023664 Murein transglycosylase-C BED35_04765 IPR024570 Murein transglycosylase-C, N-terminal BED35_04770 IPR007457 Fe(II) trafficking protein YggX BED35_04770 IPR036766 BED35_04770 BED35_04775 IPR000445 Helix-hairpin-helix motif BED35_04775 IPR003265 HhH-GPD domain BED35_04775 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif BED35_04775 IPR004035 Endonuclease III, iron-sulphur binding site BED35_04775 IPR004036 Endonuclease III-like, conserved site-2 BED35_04775 IPR005760 A/G-specific adenine glycosylase MutY BED35_04775 IPR011257 DNA glycosylase BED35_04775 IPR015797 NUDIX hydrolase domain-like BED35_04775 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal BED35_04775 IPR029119 MutY, C-terminal BED35_04780 IPR003358 tRNA (guanine-N-7) methyltransferase BED35_04780 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BED35_04785 IPR007416 Protein of unknown function DUF469 BED35_04790 IPR012338 Beta-lactamase/transpeptidase-like BED35_04790 IPR015868 Glutaminase BED35_04795 IPR021307 Protein of unknown function DUF2884 BED35_04800 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related BED35_04800 IPR006638 Elongator protein 3/MiaB/NifB BED35_04800 IPR007197 Radical SAM BED35_04800 IPR010723 HemN, C-terminal domain BED35_04800 IPR023404 Radical SAM, alpha/beta horseshoe BED35_04805 IPR002637 Ham1-like protein BED35_04805 IPR020922 Non-canonical purine NTP pyrophosphatase BED35_04805 IPR029001 Inosine triphosphate pyrophosphatase-like BED35_04810 IPR003746 Protein of unknown function DUF167 BED35_04810 IPR005228 Conserved hypothetical protein CHP00251 BED35_04810 IPR036591 BED35_04810 BED35_04815 IPR003425 Uncharacterised protein family Ycf19 BED35_04820 IPR000304 Pyrroline-5-carboxylate reductase BED35_04820 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like BED35_04820 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal BED35_04820 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain BED35_04820 IPR036291 BED35_04820 BED35_04825 IPR001608 Alanine racemase, N-terminal BED35_04825 IPR011078 Uncharacterised protein family UPF0001 BED35_04825 IPR029066 PLP-binding barrel BED35_04830 IPR001482 Type II secretion system protein E BED35_04830 IPR006321 Pilus retraction protein PilT BED35_04830 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_04835 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type BED35_04835 IPR017754 Agmatine deiminase BED35_04840 IPR003010 Carbon-nitrogen hydrolase BED35_04840 IPR017755 N-carbamoylputrescine amidase BED35_04840 IPR036526 BED35_04840 BED35_04845 IPR005227 Resolvase, holliday junction-type, YqgF-like BED35_04845 IPR006641 YqgF/RNase H-like domain BED35_04845 IPR012337 Ribonuclease H-like domain BED35_04845 IPR037027 BED35_04845 BED35_04850 IPR003774 Protein of unknown function UPF0301 BED35_04855 IPR004215 Prokaryotic glutathione synthetase, N-terminal BED35_04855 IPR004218 Prokaryotic glutathione synthetase, ATP-binding BED35_04855 IPR006284 Glutathione synthetase, prokaryotic BED35_04855 IPR013815 ATP-grasp fold, subdomain 1 BED35_04855 IPR016185 Pre-ATP-grasp domain BED35_04860 IPR006700 Ribosomal RNA small subunit methyltransferase E BED35_04860 IPR015947 PUA-like domain BED35_04860 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BED35_04860 IPR029028 Alpha/beta knot methyltransferases BED35_04865 IPR007346 Endonuclease I BED35_04870 IPR006640 Domain of unknown function SprT-like BED35_04870 IPR023483 Uncharacterised protein family SprT BED35_04870 IPR035240 BED35_04870 BED35_04875 IPR001845 HTH ArsR-type DNA-binding domain BED35_04875 IPR036388 BED35_04875 BED35_04875 IPR036390 BED35_04875 BED35_04880 IPR001207 Transposase, mutator type BED35_04885 IPR007272 Sulphur transport domain BED35_04890 IPR007272 Sulphur transport domain BED35_04895 IPR002133 S-adenosylmethionine synthetase BED35_04895 IPR022628 S-adenosylmethionine synthetase, N-terminal BED35_04895 IPR022629 S-adenosylmethionine synthetase, central domain BED35_04895 IPR022630 S-adenosylmethionine synthetase, C-terminal BED35_04895 IPR022631 S-adenosylmethionine synthetase, conserved site BED35_04895 IPR022636 S-adenosylmethionine synthetase superfamily BED35_04900 IPR000183 Ornithine/DAP/Arg decarboxylase BED35_04900 IPR002985 Arginine decarboxylase BED35_04900 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal BED35_04900 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal BED35_04900 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site BED35_04900 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site BED35_04900 IPR029066 PLP-binding barrel BED35_04905 IPR017941 Rieske [2Fe-2S] iron-sulphur domain BED35_04905 IPR036922 BED35_04905 BED35_04910 IPR001915 Peptidase M48 BED35_04915 IPR005474 Transketolase, N-terminal BED35_04915 IPR005475 Transketolase-like, pyrimidine-binding domain BED35_04915 IPR005478 Transketolase, bacterial-like BED35_04915 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II BED35_04915 IPR020826 Transketolase binding site BED35_04915 IPR029061 Thiamin diphosphate-binding fold BED35_04915 IPR033248 BED35_04915 BED35_04920 IPR006422 D-erythrose-4-phosphate dehydrogenase BED35_04920 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain BED35_04920 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain BED35_04920 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site BED35_04920 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family BED35_04920 IPR036291 BED35_04920 BED35_04925 IPR001576 Phosphoglycerate kinase BED35_04925 IPR015824 Phosphoglycerate kinase, N-terminal BED35_04925 IPR015911 Phosphoglycerate kinase, conserved site BED35_04925 IPR036043 BED35_04925 BED35_04930 IPR000771 Ketose-bisphosphate aldolase, class-II BED35_04930 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype BED35_04930 IPR013785 Aldolase-type TIM barrel BED35_04935 IPR000242 Protein-tyrosine phosphatase, receptor/non-receptor type BED35_04935 IPR003546 Type III secreted modular tyrosine phosphatase, SptP/YopH BED35_04935 IPR003595 Protein-tyrosine phosphatase, catalytic BED35_04935 IPR016130 Protein-tyrosine phosphatase, active site BED35_04935 IPR029021 Protein-tyrosine phosphatase-like BED35_04940 IPR006685 Mechanosensitive ion channel MscS BED35_04940 IPR006686 Mechanosensitive ion channel MscS, conserved site BED35_04940 IPR008910 Conserved TM helix BED35_04940 IPR010920 Like-Sm (LSM) domain BED35_04940 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 BED35_04940 IPR011066 Mechanosensitive ion channel MscS, C-terminal BED35_04940 IPR023408 BED35_04940 BED35_04945 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED35_04945 IPR003346 Transposase, IS116/IS110/IS902 BED35_04950 IPR001123 Lysine-type exporter protein (LYSE/YGGA) BED35_04950 IPR004777 L-lysine exporter/arginine exporter BED35_04950 IPR023445 Arginine exporter protein ArgO, enterobacteria BED35_04955 IPR007497 Protein of unknown function DUF541 BED35_04960 IPR000847 Transcription regulator HTH, LysR BED35_04960 IPR005119 LysR, substrate-binding BED35_04960 IPR017685 Transcription regulator ArgP BED35_04960 IPR023490 Chromosome initiation inhibitor BED35_04960 IPR036388 BED35_04960 BED35_04960 IPR036390 BED35_04960 BED35_04965 IPR004788 Ribose 5-phosphate isomerase, type A BED35_04965 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup BED35_04965 IPR037171 BED35_04965 BED35_04970 IPR002912 ACT domain BED35_04970 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BED35_04970 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain BED35_04970 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 BED35_04970 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site BED35_04970 IPR036291 BED35_04970 BED35_04975 IPR010921 Trp repressor/replication initiator BED35_05000 IPR001424 Superoxide dismutase, copper/zinc binding domain BED35_05000 IPR018152 Superoxide dismutase, copper/zinc, binding site BED35_05000 IPR036423 BED35_05000 BED35_05005 IPR007197 Radical SAM BED35_05005 IPR013785 Aldolase-type TIM barrel BED35_05005 IPR024924 7-carboxy-7-deazaguanine synthase-like BED35_05005 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria BED35_05025 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein BED35_05025 IPR038418 BED35_05025 BED35_05030 IPR001094 Flavodoxin BED35_05030 IPR001433 Oxidoreductase FAD/NAD(P)-binding BED35_05030 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase BED35_05030 IPR003097 FAD-binding, type 1 BED35_05030 IPR008254 Flavodoxin/nitric oxide synthase BED35_05030 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain BED35_05030 IPR017938 Riboflavin synthase-like beta-barrel BED35_05030 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain-3 BED35_05030 IPR029039 Flavoprotein-like BED35_05030 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria BED35_05030 IPR039261 BED35_05030 BED35_05035 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain BED35_05035 IPR006066 Nitrite/sulphite reductase iron-sulphur/siroheam-binding site BED35_05035 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain BED35_05035 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit BED35_05035 IPR036136 BED35_05035 BED35_05040 IPR002500 Phosphoadenosine phosphosulphate reductase BED35_05040 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase BED35_05040 IPR011800 Phosphoadenosine phosphosulphate reductase CysH BED35_05040 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED35_05045 IPR013321 Arc-type ribbon-helix-helix BED35_05045 IPR031807 BED35_05045 BED35_05045 IPR035069 BED35_05045 BED35_05050 IPR012933 HicA mRNA interferase family BED35_05050 IPR038570 BED35_05050 BED35_05055 IPR007484 Peptidase M28 BED35_05060 IPR000878 Tetrapyrrole methylase BED35_05060 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site BED35_05060 IPR006366 Uroporphyrin-III C-methyltransferase BED35_05060 IPR006367 Sirohaem synthase, N-terminal BED35_05060 IPR012409 Sirohaem synthase BED35_05060 IPR014776 Tetrapyrrole methylase, subdomain 2 BED35_05060 IPR014777 Tetrapyrrole methylase, subdomain 1 BED35_05060 IPR019478 Sirohaem synthase, dimerisation domain BED35_05060 IPR028281 Siroheme synthase, central domain BED35_05060 IPR035996 BED35_05060 BED35_05060 IPR036291 BED35_05060 BED35_05060 IPR037115 BED35_05060 BED35_05065 IPR002500 Phosphoadenosine phosphosulphate reductase BED35_05065 IPR011784 Sulphate adenylyltransferase, small subunit BED35_05065 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED35_05070 IPR000795 Elongation factor, GTP-binding domain BED35_05070 IPR005225 Small GTP-binding protein domain BED35_05070 IPR009000 Translation protein, beta-barrel domain BED35_05070 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal BED35_05070 IPR011779 Sulphate adenylyltransferase, large subunit BED35_05070 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_05070 IPR031157 BED35_05070 BED35_05075 IPR002891 Adenylylsulphate kinase BED35_05075 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_05080 IPR022721 Protein of unknown function DUF3561 BED35_05085 IPR007060 Septum formation initiator FtsL/DivIC BED35_05085 IPR023081 Cell division protein FtsB BED35_05090 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BED35_05090 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site BED35_05090 IPR029044 Nucleotide-diphospho-sugar transferases BED35_05090 IPR034683 BED35_05090 BED35_05095 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase BED35_05095 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site BED35_05095 IPR036571 BED35_05095 BED35_05100 IPR001656 Pseudouridine synthase, TruD BED35_05100 IPR020103 Pseudouridine synthase, catalytic domain BED35_05100 IPR020119 Pseudouridine synthase TruD, conserved site BED35_05105 IPR002828 Survival protein SurE-like phosphatase/nucleotidase BED35_05105 IPR030048 BED35_05105 BED35_05105 IPR036523 BED35_05105 BED35_05110 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase BED35_05110 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BED35_05115 IPR011055 Duplicated hybrid motif BED35_05115 IPR016047 Peptidase M23 BED35_05115 IPR018392 LysM domain BED35_05115 IPR036779 BED35_05115 BED35_05120 IPR000943 RNA polymerase sigma-70 BED35_05120 IPR007624 RNA polymerase sigma-70 region 3 BED35_05120 IPR007627 RNA polymerase sigma-70 region 2 BED35_05120 IPR007630 RNA polymerase sigma-70 region 4 BED35_05120 IPR009042 RNA polymerase sigma-70 region 1.2 BED35_05120 IPR012761 RNA polymerase sigma factor RpoS BED35_05120 IPR013324 RNA polymerase sigma factor, region 3/4 BED35_05120 IPR013325 RNA polymerase sigma factor, region 2 BED35_05120 IPR014284 RNA polymerase sigma-70 like domain BED35_05120 IPR036388 BED35_05120 BED35_05125 IPR000432 DNA mismatch repair protein MutS, C-terminal BED35_05125 IPR005748 DNA mismatch repair protein MutS, type 1 BED35_05125 IPR007695 DNA mismatch repair protein MutS-like, N-terminal BED35_05125 IPR007696 DNA mismatch repair protein MutS, core BED35_05125 IPR007860 DNA mismatch repair protein MutS, connector domain BED35_05125 IPR007861 DNA mismatch repair protein MutS, clamp BED35_05125 IPR016151 DNA mismatch repair protein MutS, N-terminal BED35_05125 IPR017261 DNA mismatch repair protein Msh6 BED35_05125 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_05125 IPR036187 BED35_05125 BED35_05125 IPR036678 BED35_05125 BED35_05130 IPR007016 O-antigen ligase-related BED35_05130 IPR021797 Protein of unknown function DUF3366 BED35_05130 IPR031726 BED35_05130 BED35_05135 IPR006793 FaeA-like protein BED35_05135 IPR036388 BED35_05135 BED35_05140 IPR000259 Fimbrial-type adhesion domain BED35_05140 IPR008966 Adhesion domain BED35_05140 IPR036937 BED35_05140 BED35_05145 IPR008966 Adhesion domain BED35_05145 IPR036937 BED35_05145 BED35_05150 IPR000015 Outer membrane usher protein BED35_05150 IPR018030 Fimbrial membrane usher, conserved site BED35_05150 IPR025885 PapC, N-terminal domain BED35_05150 IPR025949 PapC-like, C-terminal domain BED35_05150 IPR037224 BED35_05150 BED35_05155 IPR001829 Pili assembly chaperone, bacterial BED35_05155 IPR008962 PapD-like BED35_05155 IPR013783 Immunoglobulin-like fold BED35_05155 IPR016147 PapD, N-terminal, bacterial BED35_05155 IPR016148 Pili assembly chaperone, C-terminal domain BED35_05155 IPR018046 Pili assembly chaperone, conserved site BED35_05155 IPR036316 BED35_05155 BED35_05160 IPR000259 Fimbrial-type adhesion domain BED35_05160 IPR008966 Adhesion domain BED35_05160 IPR036937 BED35_05160 BED35_05165 IPR000259 Fimbrial-type adhesion domain BED35_05165 IPR008966 Adhesion domain BED35_05165 IPR036937 BED35_05165 BED35_05170 IPR000259 Fimbrial-type adhesion domain BED35_05170 IPR008966 Adhesion domain BED35_05170 IPR036937 BED35_05170 BED35_05175 IPR036937 BED35_05175 BED35_05180 IPR031882 BED35_05180 BED35_05185 IPR001853 DSBA-like thioredoxin domain BED35_05185 IPR036249 BED35_05185 BED35_05195 IPR003439 ABC transporter-like BED35_05195 IPR003593 AAA+ ATPase domain BED35_05195 IPR005074 Peptidase C39, bacteriocin processing BED35_05195 IPR011527 ABC transporter type 1, transmembrane domain BED35_05195 IPR017871 ABC transporter, conserved site BED35_05195 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_05195 IPR036640 BED35_05195 BED35_05200 IPR006143 RND efflux pump, membrane fusion protein BED35_05200 IPR032317 BED35_05200 BED35_05205 IPR003439 ABC transporter-like BED35_05205 IPR003593 AAA+ ATPase domain BED35_05205 IPR003838 Permease FtsX-like BED35_05205 IPR017871 ABC transporter, conserved site BED35_05205 IPR025857 MacB-like periplasmic core domain BED35_05205 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_05210 IPR003423 Outer membrane efflux protein BED35_05210 IPR010131 RND efflux system, outer membrane lipoprotein, NodT BED35_05215 IPR014030 Beta-ketoacyl synthase, N-terminal BED35_05215 IPR014031 Beta-ketoacyl synthase, C-terminal BED35_05215 IPR016039 Thiolase-like BED35_05215 IPR018201 Beta-ketoacyl synthase, active site BED35_05215 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BED35_05220 IPR002539 MaoC-like domain BED35_05220 IPR029069 HotDog domain BED35_05225 IPR009081 Acyl carrier protein-like BED35_05225 IPR036736 BED35_05225 BED35_05230 IPR002347 Glucose/ribitol dehydrogenase BED35_05230 IPR020904 Short-chain dehydrogenase/reductase, conserved site BED35_05230 IPR036291 BED35_05230 BED35_05235 IPR004839 Aminotransferase, class I/classII BED35_05235 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BED35_05235 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 BED35_05235 IPR015424 Pyridoxal phosphate-dependent transferase BED35_05240 IPR004852 Di-haem cytochrome c peroxidase BED35_05240 IPR009056 Cytochrome c-like domain BED35_05240 IPR025992 Haem-binding domain BED35_05240 IPR036909 BED35_05240 BED35_05245 IPR011051 RmlC-like cupin domain BED35_05245 IPR013096 Cupin 2, conserved barrel BED35_05245 IPR014710 RmlC-like jelly roll fold BED35_05250 IPR000640 Translation elongation factor EFG, V domain BED35_05250 IPR000795 Elongation factor, GTP-binding domain BED35_05250 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 BED35_05250 IPR004540 Translation elongation factor EFG/EF2 BED35_05250 IPR005225 Small GTP-binding protein domain BED35_05250 IPR005517 Translation elongation factor EFG/EF2, domain IV BED35_05250 IPR009000 Translation protein, beta-barrel domain BED35_05250 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BED35_05250 IPR020568 Ribosomal protein S5 domain 2-type fold BED35_05250 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_05250 IPR031157 BED35_05250 BED35_05250 IPR035647 BED35_05250 BED35_05255 IPR001845 HTH ArsR-type DNA-binding domain BED35_05255 IPR036388 BED35_05255 BED35_05255 IPR036390 BED35_05255 BED35_05260 IPR011032 GroES (chaperonin 10)-like BED35_05260 IPR013149 Alcohol dehydrogenase, C-terminal BED35_05260 IPR013154 Alcohol dehydrogenase GroES-like BED35_05260 IPR036291 BED35_05260 BED35_05265 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component BED35_05270 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit BED35_05280 IPR004701 Phosphotransferase system, mannose-type IIA component BED35_05280 IPR013789 Phosphotransferase system, mannose family IIA component BED35_05280 IPR036662 BED35_05280 BED35_05285 IPR007324 Sugar-binding domain, putative BED35_05285 IPR037171 BED35_05285 BED35_05290 IPR003010 Carbon-nitrogen hydrolase BED35_05290 IPR036526 BED35_05290 BED35_05295 IPR005561 ANTAR domain BED35_05295 IPR008327 Signal transduction response regulator, antiterminator BED35_05295 IPR011006 CheY-like superfamily BED35_05295 IPR036388 BED35_05295 BED35_05300 IPR000709 Leu/Ile/Val-binding protein BED35_05300 IPR028082 Periplasmic binding protein-like I BED35_05305 IPR004304 Acetamidase/Formamidase BED35_05310 IPR003439 ABC transporter-like BED35_05310 IPR003593 AAA+ ATPase domain BED35_05310 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_05315 IPR003439 ABC transporter-like BED35_05315 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_05320 IPR001851 ABC transporter, permease BED35_05325 IPR001851 ABC transporter, permease BED35_05330 IPR019968 Urea ABC transporter, substrate-binding protein BED35_05330 IPR028082 Periplasmic binding protein-like I BED35_05335 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain BED35_05335 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain BED35_05335 IPR011167 Iron-dependent fumarate hydratase BED35_05335 IPR020557 Fumarate lyase, conserved site BED35_05335 IPR036660 BED35_05335 BED35_05340 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site BED35_05340 IPR006656 Molybdopterin oxidoreductase BED35_05340 IPR006657 Molydopterin dinucleotide-binding domain BED35_05340 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain BED35_05340 IPR009010 Aspartate decarboxylase-like domain BED35_05340 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE BED35_05340 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site BED35_05345 IPR014297 Dimethylsulphoxide reductase, chain B BED35_05345 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BED35_05345 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BED35_05350 IPR007059 DMSO reductase anchor subunit (DmsC) BED35_05355 IPR020945 DMSO/Nitrate reductase chaperone BED35_05355 IPR026269 Tat proofreading chaperone DmsD-type BED35_05355 IPR028611 Tat proofreading chaperone DmsD BED35_05355 IPR036411 BED35_05355 BED35_05360 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED35_05360 IPR003346 Transposase, IS116/IS110/IS902 BED35_05365 IPR011701 Major facilitator superfamily BED35_05365 IPR036259 BED35_05365 BED35_05370 IPR008136 CinA, C-terminal BED35_05370 IPR036653 BED35_05370 BED35_05375 IPR003593 AAA+ ATPase domain BED35_05375 IPR013765 DNA recombination and repair protein RecA BED35_05375 IPR020584 DNA recombination/repair protein RecA, conserved site BED35_05375 IPR023400 DNA recombination and repair protein RecA, C-terminal BED35_05375 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_05380 IPR003783 Regulatory protein RecX BED35_05380 IPR036388 BED35_05380 BED35_05385 IPR002318 Alanine-tRNA ligase, class IIc BED35_05385 IPR003156 DHHA1 domain BED35_05385 IPR009000 Translation protein, beta-barrel domain BED35_05385 IPR012947 Threonyl/alanyl tRNA synthetase, SAD BED35_05385 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain BED35_05385 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain BED35_05385 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal BED35_05385 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria BED35_05390 IPR003751 Carbon storage regulator BED35_05390 IPR036107 BED35_05390 BED35_05410 IPR006439 HAD hydrolase, subfamily IA BED35_05410 IPR010976 Beta-phosphoglucomutase hydrolase BED35_05410 IPR023198 Phosphoglycolate phosphatase, domain 2 BED35_05410 IPR023214 HAD-like domain BED35_05410 IPR036412 BED35_05410 BED35_05420 IPR006334 Glutamate--cysteine ligase, monofunctional BED35_05420 IPR007370 Glutamate--cysteine ligase BED35_05420 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain BED35_05425 IPR003815 S-ribosylhomocysteinase (LuxS) BED35_05425 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like BED35_05425 IPR037005 BED35_05425 BED35_05430 IPR005170 Transporter-associated domain BED35_05430 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 BED35_05430 IPR036318 BED35_05430 BED35_05435 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED35_05435 IPR003346 Transposase, IS116/IS110/IS902 BED35_05445 IPR002541 Cytochrome c assembly protein BED35_05450 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain BED35_05450 IPR003593 AAA+ ATPase domain BED35_05450 IPR004125 Signal recognition particle, SRP54 subunit, M-domain BED35_05450 IPR004780 Signal recognition particle protein Ffh BED35_05450 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle BED35_05450 IPR022941 Signal recognition particle, SRP54 subunit BED35_05450 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_05450 IPR036891 BED35_05450 BED35_05455 IPR000307 Ribosomal protein S16 BED35_05455 IPR020592 Ribosomal protein S16, conserved site BED35_05455 IPR023803 Ribosomal protein S16 domain BED35_05460 IPR002676 RimM protein BED35_05460 IPR009000 Translation protein, beta-barrel domain BED35_05460 IPR011033 PRC-barrel-like BED35_05460 IPR011961 16S rRNA processing protein RimM BED35_05460 IPR027275 PRC-barrel domain BED35_05460 IPR036976 BED35_05460 BED35_05465 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria BED35_05465 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain BED35_05465 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal BED35_05465 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BED35_05465 IPR029028 Alpha/beta knot methyltransferases BED35_05470 IPR001857 Ribosomal protein L19 BED35_05470 IPR008991 Translation protein SH3-like domain BED35_05470 IPR018257 Ribosomal protein L19, conserved site BED35_05470 IPR038657 BED35_05470 BED35_05480 IPR004668 Anaerobic c4-dicarboxylate membrane transporter BED35_05485 IPR001789 Signal transduction response regulator, receiver domain BED35_05485 IPR007492 LytTR DNA-binding domain BED35_05485 IPR011006 CheY-like superfamily BED35_05490 IPR006218 DAHP synthetase I/KDSA BED35_05490 IPR006219 DHAP synthase, class 1 BED35_05490 IPR013785 Aldolase-type TIM barrel BED35_05495 IPR002701 Chorismate mutase BED35_05495 IPR003099 Prephenate dehydrogenase BED35_05495 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein BED35_05495 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like BED35_05495 IPR011277 Chorismate mutase, T-protein BED35_05495 IPR036263 BED35_05495 BED35_05495 IPR036291 BED35_05495 BED35_05495 IPR036979 BED35_05495 BED35_05500 IPR001086 Prephenate dehydratase BED35_05500 IPR002701 Chorismate mutase BED35_05500 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase BED35_05500 IPR010952 Chorismate mutase, gammaproteobacteria BED35_05500 IPR018528 Prephenate dehydratase, conserved site BED35_05500 IPR036263 BED35_05500 BED35_05500 IPR036979 BED35_05500 BED35_05505 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED35_05505 IPR003346 Transposase, IS116/IS110/IS902 BED35_05510 IPR001270 ClpA/B family BED35_05510 IPR003593 AAA+ ATPase domain BED35_05510 IPR003959 ATPase, AAA-type, core BED35_05510 IPR004176 Clp, N-terminal BED35_05510 IPR017730 Chaperonin ClpB BED35_05510 IPR018368 ClpA/B, conserved site 1 BED35_05510 IPR019489 Clp ATPase, C-terminal BED35_05510 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_05510 IPR028299 ClpA/B, conserved site 2 BED35_05510 IPR036628 BED35_05510 BED35_05515 IPR003730 Multi-copper polyphenol oxidoreductase, laccase BED35_05515 IPR011324 Cytotoxic necrotizing factor-like, catalytic BED35_05515 IPR038371 BED35_05515 BED35_05520 IPR002942 RNA-binding S4 domain BED35_05520 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F BED35_05520 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site BED35_05520 IPR006225 Pseudouridine synthase, RluC/RluD BED35_05520 IPR020103 Pseudouridine synthase, catalytic domain BED35_05520 IPR036986 BED35_05520 BED35_05525 IPR011990 Tetratricopeptide-like helical domain BED35_05525 IPR017689 Outer membrane protein assembly factor BamD BED35_05525 IPR039565 BED35_05525 BED35_05535 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein BED35_05535 IPR036567 BED35_05535 BED35_05540 IPR001207 Transposase, mutator type BED35_05545 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED35_05545 IPR003346 Transposase, IS116/IS110/IS902 BED35_05575 IPR017028 Uncharacterised conserved protein UCP034456 BED35_05575 IPR018736 Protein of unknown function DUF2279, periplasmic lipoprotein BED35_05580 IPR001736 Phospholipase D/Transphosphatidylase BED35_05580 IPR025202 Phospholipase D-like domain BED35_05585 IPR000182 GNAT domain BED35_05585 IPR003781 CoA-binding BED35_05585 IPR013815 ATP-grasp fold, subdomain 1 BED35_05585 IPR016102 Succinyl-CoA synthetase-like BED35_05585 IPR016181 Acyl-CoA N-acyltransferase BED35_05585 IPR032875 BED35_05585 BED35_05585 IPR036291 BED35_05585 BED35_05590 IPR005636 DTW BED35_05595 IPR005746 Thioredoxin BED35_05595 IPR013766 Thioredoxin domain BED35_05595 IPR017937 Thioredoxin, conserved site BED35_05595 IPR036249 BED35_05595 BED35_05600 IPR001537 tRNA/rRNA methyltransferase, SpoU type BED35_05600 IPR013123 RNA 2-O ribose methyltransferase, substrate binding BED35_05600 IPR016479 tRNA/rRNA methyltransferase, YfiF, predicted BED35_05600 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BED35_05600 IPR029028 Alpha/beta knot methyltransferases BED35_05600 IPR029064 50S ribosomal protein L30e-like BED35_05605 IPR004638 Drug resistance transporter EmrB/QacA subfamily BED35_05605 IPR011701 Major facilitator superfamily BED35_05605 IPR036259 BED35_05605 BED35_05610 IPR005694 Efflux pump membrane protein Emr BED35_05610 IPR006143 RND efflux pump, membrane fusion protein BED35_05610 IPR032317 BED35_05610 BED35_05615 IPR003423 Outer membrane efflux protein BED35_05615 IPR010131 RND efflux system, outer membrane lipoprotein, NodT BED35_05620 IPR000835 MarR-type HTH domain BED35_05620 IPR023187 Transcriptional regulator MarR-type, conserved site BED35_05620 IPR036388 BED35_05620 BED35_05620 IPR036390 BED35_05620 BED35_05625 IPR008407 Branched-chain amino acid transport, AzlD BED35_05630 IPR011606 Branched-chain amino acid transport, permease BED35_05635 IPR011701 Major facilitator superfamily BED35_05635 IPR036259 BED35_05635 BED35_05645 IPR024507 Protein of unknown function DUF3225 BED35_05645 IPR032710 BED35_05645 BED35_05650 IPR014087 Amidohydrolase, AtzE type BED35_05650 IPR023631 Amidase signature domain BED35_05650 IPR036928 BED35_05650 BED35_05655 IPR025148 Protein of unknown function DUF4089 BED35_05660 IPR000281 Helix-turn-helix protein RpiR BED35_05660 IPR001347 Sugar isomerase (SIS) BED35_05660 IPR009057 Homeodomain-like BED35_05660 IPR036388 BED35_05660 BED35_05665 IPR001638 Extracellular solute-binding protein, family 3 BED35_05665 IPR018313 Extracellular solute-binding protein, family 3, conserved site BED35_05670 IPR000515 MetI-like domain BED35_05670 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family BED35_05670 IPR035906 BED35_05670 BED35_05675 IPR000515 MetI-like domain BED35_05675 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family BED35_05675 IPR035906 BED35_05675 BED35_05680 IPR003439 ABC transporter-like BED35_05680 IPR003593 AAA+ ATPase domain BED35_05680 IPR017871 ABC transporter, conserved site BED35_05680 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_05680 IPR030679 BED35_05680 BED35_05695 IPR001110 Uncharacterised protein family UPF0012, conserved site BED35_05695 IPR003010 Carbon-nitrogen hydrolase BED35_05695 IPR036526 BED35_05695 BED35_05700 IPR004839 Aminotransferase, class I/classII BED35_05700 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BED35_05700 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 BED35_05700 IPR015424 Pyridoxal phosphate-dependent transferase BED35_05705 IPR002104 Integrase, catalytic BED35_05705 IPR010998 Integrase, Lambda-type, N-terminal BED35_05705 IPR011010 DNA breaking-rejoining enzyme, catalytic core BED35_05705 IPR013762 Integrase-like, catalytic core BED35_05705 IPR022000 Domain of unknown function (DUF3596) BED35_05710 IPR009634 Bacteriophage 933W, Xis excisionase BED35_05710 IPR038146 BED35_05710 BED35_05715 IPR007757 MT-A70-like BED35_05715 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BED35_05755 IPR018330 RecT family BED35_05760 IPR024432 Putative exodeoxyribonuclease 8, PDDEXK-like domain BED35_05800 IPR024493 Protein of unknown function DUF2767 BED35_05805 IPR031892 BED35_05805 BED35_05810 IPR031894 BED35_05810 BED35_05815 IPR001387 Cro/C1-type helix-turn-helix domain BED35_05815 IPR010982 Lambda repressor-like, DNA-binding domain BED35_05815 IPR015927 Peptidase S24/S26A/S26B/S26C BED35_05815 IPR036286 BED35_05815 BED35_05820 IPR000655 Regulatory protein cro BED35_05820 IPR010982 Lambda repressor-like, DNA-binding domain BED35_05820 IPR038202 BED35_05820 BED35_05825 IPR007933 Transcription activator CII BED35_05825 IPR010982 Lambda repressor-like, DNA-binding domain BED35_05835 IPR006497 Bacteriophage lambda, GpO, N-terminal BED35_05835 IPR036388 BED35_05835 BED35_05840 IPR002611 IstB-like ATP-binding protein BED35_05840 IPR003593 AAA+ ATPase domain BED35_05840 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_05855 IPR007539 Domain of unknown function DUF551 BED35_05865 IPR008711 Recombinase NinB BED35_05865 IPR036619 BED35_05865 BED35_05875 IPR010774 Protein of unknown function DUF1364 BED35_05880 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like BED35_05880 IPR016281 Crossover junction endodeoxyribonuclease, RusA BED35_05880 IPR036614 BED35_05880 BED35_05890 IPR003222 Antitermination protein BED35_05890 IPR036410 BED35_05890 BED35_05905 IPR002196 Glycoside hydrolase, family 24 BED35_05905 IPR023346 Lysozyme-like domain BED35_05910 IPR004929 Bacteriophage Rz lysis protein BED35_05915 IPR014054 Bacteriophage regulatory protein, Rha family BED35_05920 IPR022741 Bacteriophage B103, Gp8, head fibre BED35_05940 IPR006517 Archaeophage PsiM2, terminase large subunit BED35_05945 IPR024459 Protein of unknown function DUF1073 BED35_05950 IPR006528 Phage head morphogenesis domain BED35_05960 IPR016913 Uncharacterised conserved protein UCP029215 BED35_05980 IPR025127 Protein of unknown function DUF4054 BED35_06000 IPR021808 Bacteriophage rv5, Orf53 BED35_06015 IPR008258 Lytic transglycosylase-like SLT domain BED35_06015 IPR023346 Lysozyme-like domain BED35_06045 IPR014462 Bacteriophage Mu, Gp45 BED35_06045 IPR037026 BED35_06045 BED35_06055 IPR006949 Baseplate assembly protein J-like, predicted BED35_06075 IPR001303 Class II aldolase/adducin N-terminal BED35_06075 IPR017714 Methylthioribulose-1-phosphate dehydratase BED35_06075 IPR036409 BED35_06075 BED35_06080 IPR006439 HAD hydrolase, subfamily IA BED35_06080 IPR023214 HAD-like domain BED35_06080 IPR023943 Enolase-phosphatase E1 BED35_06080 IPR036412 BED35_06080 BED35_06085 IPR004313 Acireductone dioxygenase ARD family BED35_06085 IPR011051 RmlC-like cupin domain BED35_06085 IPR014710 RmlC-like jelly roll fold BED35_06085 IPR023956 Acireductone dioxygenase ARD BED35_06090 IPR000649 Initiation factor 2B-related BED35_06090 IPR005251 Methylthioribose-1-phosphate isomerase BED35_06090 IPR011559 Initiation factor 2B alpha/beta/delta BED35_06090 IPR027363 Methylthioribose-1-phosphate isomerase-like, N-terminal domain BED35_06090 IPR037171 BED35_06090 BED35_06095 IPR002575 Aminoglycoside phosphotransferase BED35_06095 IPR009212 Methylthioribose kinase BED35_06095 IPR011009 Protein kinase-like domain BED35_06100 IPR005565 Haemolysin activator HlyB BED35_06100 IPR013686 Polypeptide-transport-associated, ShlB-type BED35_06105 IPR006626 Parallel beta-helix repeat BED35_06115 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain BED35_06115 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal BED35_06115 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain BED35_06115 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal BED35_06115 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type BED35_06115 IPR036250 BED35_06115 BED35_06115 IPR037069 BED35_06115 BED35_06120 IPR001347 Sugar isomerase (SIS) BED35_06120 IPR004515 Phosphoheptose isomerase BED35_06125 IPR026869 Putative glutamine amidotransferase type 2 BED35_06125 IPR029055 Nucleophile aminohydrolases, N-terminal BED35_06130 IPR005490 L,D-transpeptidase catalytic domain BED35_06130 IPR038063 BED35_06130 BED35_06135 IPR008703 NADH-quinone reductase, Na(+)-translocating, subunit A BED35_06135 IPR022615 NADH-quinone reductase, Na(+)-translocating, subunit A, C-terminal BED35_06140 IPR004338 NADH-quinone reductase NQR2/RnfD BED35_06140 IPR010966 NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit BED35_06145 IPR007329 FMN-binding BED35_06145 IPR010204 NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit BED35_06150 IPR003667 Electron transport complex, Rnf/Nqr BED35_06150 IPR011292 NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit BED35_06160 IPR001041 2Fe-2S ferredoxin-type domain BED35_06160 IPR001433 Oxidoreductase FAD/NAD(P)-binding BED35_06160 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase BED35_06160 IPR008333 Oxidoreductase, FAD-binding domain BED35_06160 IPR010205 NADH-quinone reductase, Na(+)-translocating, F subunit BED35_06160 IPR012675 Beta-grasp domain BED35_06160 IPR017938 Riboflavin synthase-like beta-barrel BED35_06160 IPR036010 BED35_06160 BED35_06160 IPR039261 BED35_06160 BED35_06165 IPR003374 ApbE-like domain BED35_06165 IPR024932 Flavin transferase ApbE BED35_06170 IPR007495 Protein of unknown function DUF539 BED35_06175 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain BED35_06175 IPR030395 BED35_06175 BED35_06180 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site BED35_06180 IPR005905 D-alanine--D-alanine ligase BED35_06180 IPR011095 D-alanine--D-alanine ligase, C-terminal BED35_06180 IPR011127 D-alanine--D-alanine ligase, N-terminal domain BED35_06180 IPR013815 ATP-grasp fold, subdomain 1 BED35_06180 IPR016185 Pre-ATP-grasp domain BED35_06185 IPR013559 YheO-like BED35_06185 IPR039445 BED35_06185 BED35_06190 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme BED35_06190 IPR036052 BED35_06190 BED35_06200 IPR001126 DNA-repair protein, UmuC-like BED35_06200 IPR017961 DNA polymerase, Y-family, little finger domain BED35_06200 IPR022880 DNA polymerase IV BED35_06200 IPR024728 DNA polymerase type-Y, HhH motif BED35_06200 IPR036775 BED35_06200 BED35_06205 IPR001160 Peptidase M20C, Xaa-His dipeptidase BED35_06205 IPR002933 Peptidase M20 BED35_06205 IPR011650 Peptidase M20, dimerisation domain BED35_06210 IPR000836 Phosphoribosyltransferase domain BED35_06210 IPR023747 Xanthine-guanine phosphoribosyltransferase BED35_06210 IPR029057 Phosphoribosyltransferase-like BED35_06215 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED35_06215 IPR003346 Transposase, IS116/IS110/IS902 BED35_06220 IPR010520 Protein of unknown function DUF1100, hydrolase-like BED35_06220 IPR029058 Alpha/Beta hydrolase fold BED35_06225 IPR009986 Sigma factor-binding protein Crl BED35_06225 IPR038208 BED35_06225 BED35_06230 IPR001048 Aspartate/glutamate/uridylate kinase BED35_06230 IPR001057 Glutamate/acetylglutamate kinase BED35_06230 IPR002478 PUA domain BED35_06230 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase BED35_06230 IPR011529 Glutamate 5-kinase BED35_06230 IPR015947 PUA-like domain BED35_06230 IPR019797 Glutamate 5-kinase, conserved site BED35_06230 IPR036393 BED35_06230 BED35_06230 IPR036974 BED35_06230 BED35_06235 IPR000965 Gamma-glutamyl phosphate reductase GPR BED35_06235 IPR012134 Glutamate-5-semialdehyde dehydrogenase BED35_06235 IPR015590 Aldehyde dehydrogenase domain BED35_06235 IPR016161 Aldehyde/histidinol dehydrogenase BED35_06235 IPR016162 Aldehyde dehydrogenase, N-terminal BED35_06235 IPR016163 Aldehyde dehydrogenase, C-terminal BED35_06235 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site BED35_06240 IPR000524 Transcription regulator HTH, GntR BED35_06240 IPR011663 UbiC transcription regulator-associated BED35_06240 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain BED35_06240 IPR036388 BED35_06240 BED35_06240 IPR036390 BED35_06240 BED35_06245 IPR001996 Phosphotransferase system, IIB component, type 1 BED35_06245 IPR003352 Phosphotransferase system, EIIC BED35_06245 IPR010975 Phosphotransferase system, alpha-glucoside-specific IIBC component BED35_06245 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site BED35_06245 IPR036878 BED35_06245 BED35_06250 IPR001088 Glycoside hydrolase, family 4 BED35_06250 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal BED35_06250 IPR022616 Glycosyl hydrolase, family 4, C-terminal BED35_06250 IPR036291 BED35_06250 BED35_06255 IPR009875 PilZ domain BED35_06255 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal BED35_06255 IPR023787 Type III secretion system flagellar brake protein YcgR BED35_06260 IPR008928 Six-hairpin glycosidase-like BED35_06260 IPR009342 Putative carbohydrate binding domain BED35_06260 IPR010383 Glycosyltransferase 36 BED35_06260 IPR011013 Galactose mutarotase-like domain BED35_06260 IPR012341 Six-hairpin glycosidase BED35_06260 IPR019282 Domain of unknown function DUF2329 BED35_06260 IPR033432 BED35_06260 BED35_06260 IPR037018 BED35_06260 BED35_06270 IPR000182 GNAT domain BED35_06270 IPR016181 Acyl-CoA N-acyltransferase BED35_06275 IPR013216 Methyltransferase type 11 BED35_06275 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BED35_06280 IPR010854 Domain of unknown function DUF1471 BED35_06280 IPR025543 Dodecin-like BED35_06280 IPR036275 BED35_06280 BED35_06285 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BED35_06295 IPR000531 TonB-dependent receptor, beta-barrel BED35_06295 IPR010105 TonB-dependent siderophore receptor BED35_06295 IPR012910 TonB-dependent receptor, plug BED35_06295 IPR036942 BED35_06295 BED35_06295 IPR037066 BED35_06295 BED35_06300 IPR000623 Shikimate kinase/Threonine synthase-like 1 BED35_06300 IPR023000 Shikimate kinase, conserved site BED35_06300 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_06300 IPR027544 Shikimate kinase 2 BED35_06300 IPR031322 BED35_06300 BED35_06305 IPR009664 Protein of unknown function DUF1255 BED35_06305 IPR011051 RmlC-like cupin domain BED35_06305 IPR014710 RmlC-like jelly roll fold BED35_06310 IPR007476 Putative exonuclease, RdgC BED35_06315 IPR000600 ROK BED35_06320 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_06320 IPR038729 BED35_06320 BED35_06325 IPR004593 Nuclease SbcCD subunit D BED35_06325 IPR004843 Calcineurin-like phosphoesterase domain, apaH type BED35_06325 IPR026843 Nuclease SbcCD subunit D, C-terminal domain BED35_06325 IPR029052 Metallo-dependent phosphatase-like BED35_06330 IPR001789 Signal transduction response regulator, receiver domain BED35_06330 IPR001867 Signal transduction response regulator, C-terminal BED35_06330 IPR011006 CheY-like superfamily BED35_06330 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB BED35_06330 IPR016032 Signal transduction response regulator, C-terminal effector BED35_06330 IPR036388 BED35_06330 BED35_06335 IPR000014 PAS domain BED35_06335 IPR003594 Histidine kinase-like ATPase, C-terminal domain BED35_06335 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain BED35_06335 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BED35_06335 IPR013767 PAS fold BED35_06335 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR BED35_06335 IPR021766 Protein of unknown function DUF3329 BED35_06335 IPR035965 BED35_06335 BED35_06335 IPR036097 BED35_06335 BED35_06335 IPR036890 BED35_06335 BED35_06340 IPR011862 Phosphate binding protein BED35_06340 IPR024370 PBP domain BED35_06345 IPR004685 Branched-chain amino acid transport system II carrier protein BED35_06350 IPR002293 Amino acid/polyamine transporter I BED35_06350 IPR004840 Amino acid permease, conserved site BED35_06350 IPR004841 Amino acid permease/ SLC12A domain BED35_06355 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain BED35_06355 IPR006047 Glycosyl hydrolase, family 13, catalytic domain BED35_06355 IPR013780 Glycosyl hydrolase, family 13, all-beta BED35_06355 IPR017069 Maltodextrin glucosidase BED35_06355 IPR017853 Glycoside hydrolase, superfamily BED35_06360 IPR002347 Glucose/ribitol dehydrogenase BED35_06360 IPR036291 BED35_06360 BED35_06365 IPR000101 Gamma-glutamyltranspeptidase BED35_06365 IPR029055 Nucleophile aminohydrolases, N-terminal BED35_06370 IPR000021 Hok/gef cell toxic protein BED35_06375 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant BED35_06375 IPR019479 Peroxiredoxin, C-terminal BED35_06375 IPR024706 Peroxiredoxin, AhpC-type BED35_06375 IPR036249 BED35_06375 BED35_06380 IPR007431 Acyl carrier protein phosphodiesterase BED35_06380 IPR023491 Acyl carrier protein phosphodiesterase, gammaproteobacteria BED35_06385 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA BED35_06385 IPR036100 BED35_06385 BED35_06390 IPR000073 Alpha/beta hydrolase fold-1 BED35_06390 IPR029058 Alpha/Beta hydrolase fold BED35_06395 IPR002616 tRNA-guanine(15) transglycosylase-like BED35_06395 IPR004803 Queuine tRNA-ribosyltransferase BED35_06395 IPR036511 BED35_06395 BED35_06400 IPR003849 Preprotein translocase YajC BED35_06405 IPR005791 Protein translocase subunit SecD BED35_06405 IPR022645 Protein-export membrane protein SecD/SecF, bacterial BED35_06405 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site BED35_06405 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial BED35_06405 IPR027398 SecD export protein N-terminal TM domain BED35_06410 IPR005665 Protein-export membrane protein SecF, bacterial BED35_06410 IPR022645 Protein-export membrane protein SecD/SecF, bacterial BED35_06410 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site BED35_06410 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial BED35_06425 IPR003796 Ribonucleotide reductase regulator NrdR-like BED35_06425 IPR005144 ATP-cone BED35_06430 IPR002125 CMP/dCMP deaminase, zinc-binding BED35_06430 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal BED35_06430 IPR004794 Riboflavin biosynthesis protein RibD BED35_06430 IPR011549 Riboflavin-specific deaminase, C-terminal BED35_06430 IPR016192 APOBEC/CMP deaminase, zinc-binding BED35_06430 IPR016193 Cytidine deaminase-like BED35_06430 IPR024072 Dihydrofolate reductase-like domain BED35_06435 IPR002180 6,7-dimethyl-8-ribityllumazine synthase BED35_06435 IPR034964 BED35_06435 BED35_06435 IPR036467 BED35_06435 BED35_06440 IPR006027 NusB/RsmB/TIM44 BED35_06440 IPR011605 NusB antitermination factor BED35_06440 IPR035926 BED35_06440 BED35_06445 IPR006283 Thiamine-monophosphate kinase BED35_06445 IPR010918 AIR synthase-related protein, C-terminal domain BED35_06445 IPR016188 PurM, N-terminal-like BED35_06445 IPR036676 BED35_06445 BED35_06445 IPR036921 BED35_06445 BED35_06450 IPR007686 YutG/PgpA domain BED35_06450 IPR026037 Phosphatidylglycerophosphatase A BED35_06450 IPR036681 BED35_06450 BED35_06455 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED35_06455 IPR003346 Transposase, IS116/IS110/IS902 BED35_06460 IPR005475 Transketolase-like, pyrimidine-binding domain BED35_06460 IPR005477 Deoxyxylulose-5-phosphate synthase BED35_06460 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II BED35_06460 IPR020826 Transketolase binding site BED35_06460 IPR029061 Thiamin diphosphate-binding fold BED35_06460 IPR033248 BED35_06460 BED35_06465 IPR000092 Polyprenyl synthetase BED35_06465 IPR008949 Terpenoid synthase BED35_06465 IPR033749 BED35_06465 BED35_06470 IPR003761 Exonuclease VII, small subunit BED35_06470 IPR037004 BED35_06470 BED35_06475 IPR003720 tRNA sulfurtransferase ThiI BED35_06475 IPR004114 THUMP BED35_06475 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED35_06475 IPR020536 Thil, AANH domain BED35_06475 IPR026340 Thiazole biosynthesis domain BED35_06475 IPR036873 BED35_06475 BED35_06480 IPR002818 ThiJ/PfpI BED35_06480 IPR006287 DJ-1 BED35_06480 IPR029062 Class I glutamine amidotransferase-like BED35_06485 IPR003710 Ketopantoate reductase ApbA/PanE BED35_06485 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like BED35_06485 IPR013328 Dehydrogenase, multihelical BED35_06485 IPR013332 Ketopantoate reductase, N-terminal domain BED35_06485 IPR013752 Ketopantoate reductase, C-terminal domain BED35_06485 IPR036291 BED35_06485 BED35_06490 IPR007551 Protein of unknown function DUF520 BED35_06490 IPR035570 BED35_06490 BED35_06490 IPR035571 BED35_06490 BED35_06490 IPR036183 BED35_06490 BED35_06495 IPR011701 Major facilitator superfamily BED35_06495 IPR036259 BED35_06495 BED35_06500 IPR000537 UbiA prenyltransferase family BED35_06500 IPR006369 Protohaem IX farnesyltransferase BED35_06500 IPR030470 BED35_06500 BED35_06505 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes BED35_06505 IPR014210 Cytochrome o ubiquinol oxidase subunit IV BED35_06510 IPR000298 Cytochrome c oxidase subunit III domain BED35_06510 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle BED35_06510 IPR014206 Cytochrome o ubiquinol oxidase, subunit III BED35_06510 IPR035973 BED35_06510 BED35_06515 IPR000883 Cytochrome c oxidase subunit I BED35_06515 IPR014207 Cytochrome o ubiquinol oxidase, subunit I BED35_06515 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site BED35_06515 IPR036927 BED35_06515 BED35_06520 IPR002429 Cytochrome c oxidase subunit II C-terminal BED35_06520 IPR006333 Cytochrome o ubiquinol oxidase subunit II BED35_06520 IPR008972 Cupredoxin BED35_06520 IPR010514 COX aromatic rich motif BED35_06520 IPR036257 BED35_06520 BED35_06525 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like BED35_06525 IPR036777 BED35_06525 BED35_06530 IPR011701 Major facilitator superfamily BED35_06530 IPR036259 BED35_06530 BED35_06535 IPR005619 Uncharacterised protein family, YajG BED35_06535 IPR012640 Membrane lipoprotein, lipid attachment site BED35_06540 IPR002634 BolA protein BED35_06540 IPR036065 BED35_06540 BED35_06550 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain BED35_06550 IPR005215 Trigger factor BED35_06550 IPR008880 Trigger factor, C-terminal domain BED35_06550 IPR008881 Trigger factor, ribosome-binding, bacterial BED35_06550 IPR027304 Trigger factor/SurA domain BED35_06550 IPR036611 BED35_06550 BED35_06550 IPR037041 BED35_06550 BED35_06555 IPR001907 ATP-dependent Clp protease proteolytic subunit BED35_06555 IPR018215 ClpP, active site BED35_06555 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA BED35_06555 IPR029045 ClpP/crotonase-like domain BED35_06555 IPR033135 BED35_06555 BED35_06560 IPR003593 AAA+ ATPase domain BED35_06560 IPR003959 ATPase, AAA-type, core BED35_06560 IPR004487 Clp protease, ATP-binding subunit ClpX BED35_06560 IPR010603 Zinc finger, ClpX C4-type BED35_06560 IPR019489 Clp ATPase, C-terminal BED35_06560 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_06560 IPR038366 BED35_06560 BED35_06565 IPR003111 Peptidase S16, lon N-terminal BED35_06565 IPR003593 AAA+ ATPase domain BED35_06565 IPR003959 ATPase, AAA-type, core BED35_06565 IPR004815 Lon protease, bacterial/eukaryotic-type BED35_06565 IPR008268 Peptidase S16, active site BED35_06565 IPR008269 Peptidase S16, Lon C-terminal BED35_06565 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BED35_06565 IPR015947 PUA-like domain BED35_06565 IPR020568 Ribosomal protein S5 domain 2-type fold BED35_06565 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_06565 IPR027543 Lon protease, bacterial BED35_06570 IPR000119 Histone-like bacterial DNA-binding protein BED35_06570 IPR010992 Integration host factor (IHF)-like DNA-binding domain BED35_06570 IPR020816 Histone-like DNA-binding protein, conserved site BED35_06575 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type BED35_06575 IPR027304 Trigger factor/SurA domain BED35_06580 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 BED35_06580 IPR004509 Competence protein ComEA, helix-hairpin-helix domain BED35_06580 IPR010994 RuvA domain 2-like BED35_06585 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family BED35_06585 IPR029069 HotDog domain BED35_06590 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED35_06590 IPR018317 Queuosine biosynthesis protein QueC BED35_06595 IPR000914 Bacterial extracellular solute-binding protein, family 5 BED35_06595 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain BED35_06600 IPR000150 Cof protein BED35_06600 IPR006379 HAD-superfamily hydrolase, subfamily IIB BED35_06600 IPR023214 HAD-like domain BED35_06600 IPR023938 HMP-PP phosphatase BED35_06600 IPR036412 BED35_06600 BED35_06605 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme BED35_06605 IPR036052 BED35_06605 BED35_06610 IPR000485 AsnC-type HTH domain BED35_06610 IPR011008 Dimeric alpha-beta barrel BED35_06610 IPR019887 Transcription regulator AsnC-type, C-terminal BED35_06610 IPR019888 Transcription regulator AsnC-type BED35_06610 IPR036388 BED35_06610 BED35_06610 IPR036390 BED35_06610 BED35_06615 IPR003439 ABC transporter-like BED35_06615 IPR003593 AAA+ ATPase domain BED35_06615 IPR011527 ABC transporter type 1, transmembrane domain BED35_06615 IPR017871 ABC transporter, conserved site BED35_06615 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_06615 IPR036640 BED35_06615 BED35_06620 IPR003439 ABC transporter-like BED35_06620 IPR003593 AAA+ ATPase domain BED35_06620 IPR011527 ABC transporter type 1, transmembrane domain BED35_06620 IPR017871 ABC transporter, conserved site BED35_06620 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_06620 IPR036640 BED35_06620 BED35_06625 IPR002187 Nitrogen regulatory protein PII BED35_06625 IPR002332 Nitrogen regulatory protein P-II, urydylation site BED35_06625 IPR011322 Nitrogen regulatory PII-like, alpha/beta BED35_06625 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BED35_06625 IPR017918 Nitrogen regulatory protein PII, conserved site BED35_06630 IPR001905 Ammonium transporter BED35_06630 IPR002229 Blood group Rhesus C/E/D polypeptide BED35_06630 IPR018047 Ammonium transporter, conserved site BED35_06630 IPR024041 Ammonium transporter AmtB-like domain BED35_06630 IPR029020 Ammonium/urea transporter BED35_06635 IPR003703 Acyl-CoA thioesterase BED35_06635 IPR029069 HotDog domain BED35_06640 IPR039366 BED35_06640 BED35_06645 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding BED35_06645 IPR036217 BED35_06645 BED35_06645 IPR036388 BED35_06645 BED35_06655 IPR007985 Haemolysin expression modulating, HHA BED35_06655 IPR036666 BED35_06655 BED35_06660 IPR019693 Biofilm formation regulator YbaJ BED35_06670 IPR003439 ABC transporter-like BED35_06670 IPR003593 AAA+ ATPase domain BED35_06670 IPR017871 ABC transporter, conserved site BED35_06670 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_06675 IPR001626 ABC-3 BED35_06675 IPR037294 BED35_06675 BED35_06680 IPR006127 Periplasmic solute binding protein family BED35_06680 IPR006128 Adhesion lipoprotein BED35_06680 IPR006129 Adhesin B BED35_06685 IPR000473 Ribosomal protein L36 BED35_06685 IPR035977 BED35_06685 BED35_06690 IPR002150 Ribosomal protein L31 BED35_06690 IPR027493 Ribosomal protein L31 type B BED35_06690 IPR034704 BED35_06690 BED35_06695 IPR019733 Uncharacterised protein family YhfT BED35_06700 IPR021238 Protein of unknown function DUF2620 BED35_06705 IPR006124 Metalloenzyme BED35_06705 IPR010045 Phosphopentomutase BED35_06705 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha BED35_06705 IPR017850 Alkaline-phosphatase-like, core domain BED35_06705 IPR024052 Phosphopentomutase DeoB cap domain BED35_06710 IPR001608 Alanine racemase, N-terminal BED35_06710 IPR029066 PLP-binding barrel BED35_06715 IPR011608 PRD domain BED35_06715 IPR036634 BED35_06715 BED35_06720 IPR001036 Acriflavin resistance protein BED35_06720 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 BED35_06720 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BED35_06725 IPR006143 RND efflux pump, membrane fusion protein BED35_06725 IPR032317 BED35_06725 BED35_06730 IPR001647 DNA-binding HTH domain, TetR-type BED35_06730 IPR009057 Homeodomain-like BED35_06730 IPR013572 Transcription regulator MAATS, C-terminal BED35_06730 IPR023772 DNA-binding HTH domain, TetR-type, conserved site BED35_06730 IPR036271 BED35_06730 BED35_06735 IPR003787 Sulphur relay, DsrE/F-like protein BED35_06735 IPR027396 DsrEFH-like BED35_06745 IPR019630 Protein of unknown function DUF2496, YbaM-related BED35_06750 IPR010890 Primosomal replication PriB/PriC BED35_06750 IPR038338 BED35_06750 BED35_06755 IPR007401 Protein of unknown function DUF454 BED35_06760 IPR000836 Phosphoribosyltransferase domain BED35_06760 IPR005764 Adenine phosphoribosyl transferase BED35_06760 IPR029057 Phosphoribosyltransferase-like BED35_06765 IPR001270 ClpA/B family BED35_06765 IPR003593 AAA+ ATPase domain BED35_06765 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal BED35_06765 IPR012763 DNA polymerase III, subunit gamma/ tau BED35_06765 IPR021029 DNA polymerase III, tau subunit, domain V BED35_06765 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV BED35_06765 IPR022754 DNA polymerase III, gamma subunit, domain III BED35_06765 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_06765 IPR038249 BED35_06765 BED35_06770 IPR004401 Nucleoid-associated protein YbaB BED35_06770 IPR036894 BED35_06770 BED35_06775 IPR000093 DNA recombination protein RecR BED35_06775 IPR006171 Toprim domain BED35_06775 IPR015967 Recombination protein RecR, conserved site BED35_06775 IPR023627 Recombination protein RecR BED35_06775 IPR023628 Recombination protein RecR, C4-type zinc finger BED35_06780 IPR001404 Heat shock protein Hsp90 family BED35_06780 IPR003594 Histidine kinase-like ATPase, C-terminal domain BED35_06780 IPR019805 Heat shock protein Hsp90, conserved site BED35_06780 IPR020568 Ribosomal protein S5 domain 2-type fold BED35_06780 IPR020575 Heat shock protein Hsp90, N-terminal BED35_06780 IPR036890 BED35_06780 BED35_06780 IPR037196 BED35_06780 BED35_06785 IPR000850 Adenylate kinase/UMP-CMP kinase BED35_06785 IPR006259 Adenylate kinase subfamily BED35_06785 IPR007862 Adenylate kinase, active site lid domain BED35_06785 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_06785 IPR033690 BED35_06785 BED35_06790 IPR001015 Ferrochelatase BED35_06790 IPR019772 Ferrochelatase, active site BED35_06795 IPR002797 Polysaccharide biosynthesis protein BED35_06800 IPR001173 Glycosyltransferase 2-like BED35_06800 IPR029044 Nucleotide-diphospho-sugar transferases BED35_06805 IPR001173 Glycosyltransferase 2-like BED35_06805 IPR029044 Nucleotide-diphospho-sugar transferases BED35_06810 IPR001296 Glycosyl transferase, family 1 BED35_06810 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain BED35_06815 IPR001296 Glycosyl transferase, family 1 BED35_06820 IPR000715 Glycosyl transferase, family 4 BED35_06825 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain BED35_06825 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BED35_06825 IPR036291 BED35_06825 BED35_06830 IPR001296 Glycosyl transferase, family 1 BED35_06830 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain BED35_06835 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain BED35_06835 IPR005886 UDP-glucose 4-epimerase GalE BED35_06835 IPR036291 BED35_06835 BED35_06840 IPR011611 Carbohydrate kinase PfkB BED35_06840 IPR029056 Ribokinase-like BED35_06845 IPR003148 Regulator of K+ conductance, N-terminal BED35_06845 IPR004771 K+/H+ exchanger BED35_06845 IPR006153 Cation/H+ exchanger BED35_06845 IPR036291 BED35_06845 BED35_06845 IPR038770 BED35_06845 BED35_06850 IPR005829 Sugar transporter, conserved site BED35_06850 IPR011701 Major facilitator superfamily BED35_06850 IPR036259 BED35_06850 BED35_06865 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC BED35_06865 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain BED35_06865 IPR036754 BED35_06865 BED35_06870 IPR002816 Pheromone shutdown, TraB BED35_06875 IPR001757 Cation-transporting P-type ATPase BED35_06875 IPR006121 Heavy metal-associated domain, HMA BED35_06875 IPR008250 P-type ATPase, A domain BED35_06875 IPR017969 Heavy-metal-associated, conserved site BED35_06875 IPR018303 P-type ATPase, phosphorylation site BED35_06875 IPR023214 HAD-like domain BED35_06875 IPR023298 P-type ATPase, transmembrane domain BED35_06875 IPR023299 P-type ATPase, cytoplasmic domain N BED35_06875 IPR027256 Cation-transporting P-type ATPase, subfamily IB BED35_06875 IPR036163 BED35_06875 BED35_06875 IPR036412 BED35_06875 BED35_06880 IPR000551 MerR-type HTH domain BED35_06880 IPR009061 DNA binding domain, putative BED35_06880 IPR011789 Cu(I)-responsive transcriptional regulator BED35_06885 IPR002810 NfeD-like, C-terminal domain BED35_06890 IPR001107 Band 7 protein BED35_06890 IPR001972 Stomatin family BED35_06890 IPR018080 Band 7/stomatin-like, conserved site BED35_06890 IPR036013 BED35_06890 BED35_06895 IPR011990 Tetratricopeptide-like helical domain BED35_06895 IPR013766 Thioredoxin domain BED35_06895 IPR036249 BED35_06895 BED35_06900 IPR002347 Glucose/ribitol dehydrogenase BED35_06900 IPR020904 Short-chain dehydrogenase/reductase, conserved site BED35_06900 IPR036291 BED35_06900 BED35_06905 IPR008265 Lipase, GDSL, active site BED35_06905 IPR013830 BED35_06905 BED35_06905 IPR036514 BED35_06905 BED35_06910 IPR003439 ABC transporter-like BED35_06910 IPR003593 AAA+ ATPase domain BED35_06910 IPR017871 ABC transporter, conserved site BED35_06910 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_06915 IPR003838 Permease FtsX-like BED35_06920 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type BED35_06920 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit BED35_06920 IPR011054 Rudiment single hybrid motif BED35_06920 IPR013815 ATP-grasp fold, subdomain 1 BED35_06920 IPR016185 Pre-ATP-grasp domain BED35_06925 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain BED35_06925 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE BED35_06925 IPR033747 BED35_06925 BED35_06925 IPR035893 BED35_06925 BED35_06930 IPR004843 Calcineurin-like phosphoesterase domain, apaH type BED35_06930 IPR010138 UDP-2,3-diacylglucosamine hydrolase BED35_06930 IPR029052 Metallo-dependent phosphatase-like BED35_06935 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain BED35_06935 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site BED35_06935 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase BED35_06935 IPR029000 Cyclophilin-like domain BED35_06940 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding BED35_06940 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED35_06940 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR BED35_06940 IPR015803 Cysteine-tRNA ligase BED35_06940 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase BED35_06940 IPR032678 BED35_06940 BED35_06945 IPR036986 BED35_06945 BED35_06950 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase BED35_06950 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BED35_06950 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BED35_06950 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site BED35_06950 IPR036291 BED35_06950 BED35_06960 IPR002104 Integrase, catalytic BED35_06960 IPR010998 Integrase, Lambda-type, N-terminal BED35_06960 IPR011010 DNA breaking-rejoining enzyme, catalytic core BED35_06960 IPR013762 Integrase-like, catalytic core BED35_06965 IPR007757 MT-A70-like BED35_06965 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BED35_07005 IPR018330 RecT family BED35_07010 IPR024432 Putative exodeoxyribonuclease 8, PDDEXK-like domain BED35_07050 IPR015927 Peptidase S24/S26A/S26B/S26C BED35_07050 IPR036286 BED35_07050 BED35_07060 IPR007933 Transcription activator CII BED35_07060 IPR010982 Lambda repressor-like, DNA-binding domain BED35_07075 IPR002611 IstB-like ATP-binding protein BED35_07075 IPR003593 AAA+ ATPase domain BED35_07075 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_07090 IPR007539 Domain of unknown function DUF551 BED35_07100 IPR008711 Recombinase NinB BED35_07100 IPR036619 BED35_07100 BED35_07110 IPR010774 Protein of unknown function DUF1364 BED35_07115 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like BED35_07115 IPR016281 Crossover junction endodeoxyribonuclease, RusA BED35_07115 IPR036614 BED35_07115 BED35_07125 IPR003222 Antitermination protein BED35_07125 IPR036410 BED35_07125 BED35_07135 IPR032126 BED35_07135 BED35_07140 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain BED35_07140 IPR039561 BED35_07140 BED35_07145 IPR016417 Bacteriophage lysis endopeptidase, predicted BED35_07145 IPR019659 Protein of unknown function DUF2514 BED35_07160 IPR009052 DNA polymerase III-theta, bacterial BED35_07160 IPR036745 BED35_07160 BED35_07180 IPR008866 Bacteriophage lambda, GpA BED35_07185 IPR004174 Head-to-tail joining protein W, GpW BED35_07185 IPR036626 BED35_07185 BED35_07190 IPR006429 Bacteriophage lambda, GpB, portal BED35_07195 IPR002142 Peptidase S49 BED35_07195 IPR029045 ClpP/crotonase-like domain BED35_07205 IPR004195 Head decoration protein D BED35_07210 IPR005564 Major head protein GpE BED35_07230 IPR024400 Protein of unknown function DUF2635 BED35_07235 IPR007067 Tail sheath protein BED35_07235 IPR020287 Tail sheath protein, C-terminal domain BED35_07235 IPR035089 BED35_07235 BED35_07240 IPR019596 Bacteriophage Mu, GpM, tail tube BED35_07250 IPR008258 Lytic transglycosylase-like SLT domain BED35_07250 IPR023346 Lysozyme-like domain BED35_07255 IPR009826 DNA circulation, N-terminal BED35_07260 IPR023399 Baseplate-like protein, two-layer sandwich domain BED35_07260 IPR026276 Baseplate protein GpP BED35_07265 IPR014462 Bacteriophage Mu, Gp45 BED35_07270 IPR010877 Bacteriophage Mu, Gp46 BED35_07275 IPR006949 Baseplate assembly protein J-like, predicted BED35_07280 IPR018755 Bacteriophage Mu, Gp48 BED35_07295 IPR002656 Acyltransferase 3 BED35_07300 IPR002104 Integrase, catalytic BED35_07300 IPR010998 Integrase, Lambda-type, N-terminal BED35_07300 IPR011010 DNA breaking-rejoining enzyme, catalytic core BED35_07300 IPR013762 Integrase-like, catalytic core BED35_07305 IPR007757 MT-A70-like BED35_07305 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BED35_07385 IPR024493 Protein of unknown function DUF2767 BED35_07390 IPR031892 BED35_07390 BED35_07395 IPR031894 BED35_07395 BED35_07400 IPR001387 Cro/C1-type helix-turn-helix domain BED35_07400 IPR010982 Lambda repressor-like, DNA-binding domain BED35_07400 IPR015927 Peptidase S24/S26A/S26B/S26C BED35_07400 IPR036286 BED35_07400 BED35_07405 IPR010982 Lambda repressor-like, DNA-binding domain BED35_07405 IPR031856 BED35_07405 BED35_07410 IPR007933 Transcription activator CII BED35_07410 IPR010982 Lambda repressor-like, DNA-binding domain BED35_07415 IPR022637 DNA polymerase III, beta chain, central BED35_07420 IPR006497 Bacteriophage lambda, GpO, N-terminal BED35_07420 IPR036388 BED35_07420 BED35_07425 IPR003593 AAA+ ATPase domain BED35_07425 IPR007693 DNA helicase, DnaB-like, N-terminal BED35_07425 IPR007694 DNA helicase, DnaB-like, C-terminal BED35_07425 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal BED35_07425 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_07425 IPR036185 BED35_07425 BED35_07450 IPR031858 BED35_07450 BED35_07455 IPR009797 Protein of unknown function DUF1367 BED35_07465 IPR002711 HNH endonuclease BED35_07465 IPR003615 HNH nuclease BED35_07470 IPR019701 Bacteriophage P22, NinX BED35_07475 IPR004843 Calcineurin-like phosphoesterase domain, apaH type BED35_07475 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase BED35_07475 IPR029052 Metallo-dependent phosphatase-like BED35_07485 IPR008713 Bacteriophage lambda NinG BED35_07495 IPR010534 Bacteriophage 933W, GpQ BED35_07510 IPR032126 BED35_07510 BED35_07515 IPR002196 Glycoside hydrolase, family 24 BED35_07515 IPR023346 Lysozyme-like domain BED35_07520 IPR004929 Bacteriophage Rz lysis protein BED35_07525 IPR018004 KilA, N-terminal/APSES-type HTH, DNA-binding BED35_07545 IPR018738 Protein of unknown function DUF2280 BED35_07555 IPR025129 Domain of unknown function DUF4055 BED35_07565 IPR024659 Phage coat protein Gp5 BED35_07610 IPR005569 Arc-like DNA binding BED35_07610 IPR010985 Ribbon-helix-helix BED35_07610 IPR013321 Arc-type ribbon-helix-helix BED35_07615 IPR003497 BRO N-terminal domain BED35_07620 IPR005039 Antirepressor protein, C-terminal BED35_07620 IPR018004 KilA, N-terminal/APSES-type HTH, DNA-binding BED35_07660 IPR006949 Baseplate assembly protein J-like, predicted BED35_07665 IPR016884 Uncharacterised conserved protein UCP028438 BED35_07680 IPR025166 Domain of unknown function DUF4102 BED35_07680 IPR038488 BED35_07680 BED35_07685 IPR002104 Integrase, catalytic BED35_07685 IPR010998 Integrase, Lambda-type, N-terminal BED35_07685 IPR011010 DNA breaking-rejoining enzyme, catalytic core BED35_07685 IPR013762 Integrase-like, catalytic core BED35_07705 IPR003812 Fido domain BED35_07705 IPR025758 Fic/DOC N-terminal BED35_07705 IPR026287 Adenosine monophosphate-protein transferase BED35_07705 IPR036597 BED35_07705 BED35_07715 IPR009241 Addiction module killer protein BED35_07720 IPR009061 DNA binding domain, putative BED35_07720 IPR010260 Bacteriophage P4, Orf88 BED35_07760 IPR036286 BED35_07760 BED35_07770 IPR001789 Signal transduction response regulator, receiver domain BED35_07770 IPR001867 Signal transduction response regulator, C-terminal BED35_07770 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response BED35_07770 IPR011006 CheY-like superfamily BED35_07770 IPR036388 BED35_07770 BED35_07775 IPR002925 Dienelactone hydrolase BED35_07775 IPR029058 Alpha/Beta hydrolase fold BED35_07780 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED35_07780 IPR003346 Transposase, IS116/IS110/IS902 BED35_07790 IPR003347 JmjC domain BED35_07800 IPR002830 UbiD decarboxylyase family BED35_07800 IPR032903 BED35_07800 BED35_07805 IPR003439 ABC transporter-like BED35_07805 IPR003593 AAA+ ATPase domain BED35_07805 IPR011527 ABC transporter type 1, transmembrane domain BED35_07805 IPR017871 ABC transporter, conserved site BED35_07805 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_07805 IPR036640 BED35_07805 BED35_07810 IPR007138 Antibiotic biosynthesis monooxygenase-like domain BED35_07810 IPR011008 Dimeric alpha-beta barrel BED35_07815 IPR015065 Glycogen synthesis protein BED35_07815 IPR036745 BED35_07815 BED35_07820 IPR004843 Calcineurin-like phosphoesterase domain, apaH type BED35_07820 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase BED35_07820 IPR029052 Metallo-dependent phosphatase-like BED35_07835 IPR002059 Cold-shock protein, DNA-binding BED35_07835 IPR012340 Nucleic acid-binding, OB-fold BED35_07840 IPR002059 Cold-shock protein, DNA-binding BED35_07840 IPR011129 Cold shock protein BED35_07840 IPR012156 Cold shock, CspA BED35_07840 IPR012340 Nucleic acid-binding, OB-fold BED35_07840 IPR019844 Cold-shock conserved site BED35_07845 IPR003691 Putative fluoride ion transporter CrcB BED35_07850 IPR000160 GGDEF domain BED35_07850 IPR007894 MASE2 BED35_07850 IPR029787 Nucleotide cyclase BED35_07855 IPR003369 Sec-independent protein translocase protein TatA/B/E BED35_07855 IPR006312 Sec-independent protein translocase protein TatA/E BED35_07855 IPR024905 Sec-independent protein translocase protein TatE BED35_07860 IPR003698 Lipoyl synthase BED35_07860 IPR006638 Elongator protein 3/MiaB/NifB BED35_07860 IPR007197 Radical SAM BED35_07860 IPR013785 Aldolase-type TIM barrel BED35_07860 IPR031691 BED35_07860 BED35_07865 IPR000544 Octanoyltransferase BED35_07865 IPR004143 Biotin/lipoate A/B protein ligase BED35_07865 IPR020605 Octanoyltransferase, conserved site BED35_07870 IPR007454 Uncharacterised protein family UPF0250 BED35_07870 IPR027471 YbeD-like domain BED35_07875 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal BED35_07875 IPR012338 Beta-lactamase/transpeptidase-like BED35_07875 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal BED35_07875 IPR015956 Penicillin-binding protein-associated BED35_07875 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A BED35_07875 IPR037167 BED35_07875 BED35_07880 IPR007730 Sporulation-related domain BED35_07880 IPR009009 RlpA-like double-psi beta-barrel domain BED35_07880 IPR012997 Rare lipoprotein A, bacterial BED35_07880 IPR034718 BED35_07880 BED35_07880 IPR036680 BED35_07880 BED35_07880 IPR036908 BED35_07880 BED35_07885 IPR001182 Cell cycle protein FtsW/RodA BED35_07885 IPR011923 Rod shape-determining protein RodA BED35_07885 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site BED35_07890 IPR001460 Penicillin-binding protein, transpeptidase BED35_07890 IPR005311 Penicillin-binding protein, dimerisation domain BED35_07890 IPR012338 Beta-lactamase/transpeptidase-like BED35_07890 IPR017790 Penicillin-binding protein 2 BED35_07890 IPR036138 BED35_07890 BED35_07895 IPR003742 SPOUT methyltransferase, predicted BED35_07895 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BED35_07895 IPR029028 Alpha/beta knot methyltransferases BED35_07900 IPR004394 Protein Iojap/ribosomal silencing factor RsfS BED35_07905 IPR004821 Cytidyltransferase-like domain BED35_07905 IPR005248 Probable nicotinate-nucleotide adenylyltransferase BED35_07905 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED35_07910 IPR005790 DNA polymerase III, delta subunit BED35_07910 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal BED35_07910 IPR010372 DNA polymerase III, delta BED35_07910 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_07910 IPR032780 BED35_07910 BED35_07915 IPR007485 Lipopolysaccharide assembly, LptE BED35_07920 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site BED35_07920 IPR002300 Aminoacyl-tRNA synthetase, class Ia BED35_07920 IPR002302 Leucine-tRNA ligase BED35_07920 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain BED35_07920 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding BED35_07920 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding BED35_07920 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED35_07920 IPR025709 Leucyl-tRNA synthetase, editing domain BED35_07925 IPR009912 Protein of unknown function DUF1451 BED35_07930 IPR003439 ABC transporter-like BED35_07930 IPR003593 AAA+ ATPase domain BED35_07930 IPR017871 ABC transporter, conserved site BED35_07930 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_07930 IPR030679 BED35_07930 BED35_07935 IPR000515 MetI-like domain BED35_07935 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family BED35_07935 IPR035906 BED35_07935 BED35_07940 IPR000515 MetI-like domain BED35_07940 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family BED35_07940 IPR035906 BED35_07940 BED35_07945 IPR001638 Extracellular solute-binding protein, family 3 BED35_07950 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain BED35_07950 IPR012349 FMN-binding split barrel BED35_07950 IPR024029 Pyridoxamine 5-phosphate oxidase, FMN-dependent BED35_07955 IPR003010 Carbon-nitrogen hydrolase BED35_07955 IPR004563 Apolipoprotein N-acyltransferase BED35_07955 IPR036526 BED35_07955 BED35_07960 IPR000644 CBS domain BED35_07960 IPR005170 Transporter-associated domain BED35_07960 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 BED35_07960 IPR036318 BED35_07960 BED35_07970 IPR003714 PhoH-like protein BED35_07970 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_07975 IPR002792 TRAM domain BED35_07975 IPR005839 Methylthiotransferase BED35_07975 IPR006463 tRNA-i(6)A37 modification enzyme MiaB BED35_07975 IPR006638 Elongator protein 3/MiaB/NifB BED35_07975 IPR007197 Radical SAM BED35_07975 IPR013848 Methylthiotransferase, N-terminal BED35_07975 IPR020612 Methylthiotransferase, conserved site BED35_07975 IPR023404 Radical SAM, alpha/beta horseshoe BED35_07975 IPR038135 BED35_07975 BED35_07980 IPR002938 Monooxygenase, FAD-binding BED35_07980 IPR010971 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6 BED35_07980 IPR036188 BED35_07980 BED35_08015 IPR001962 Asparagine synthase BED35_08015 IPR006426 Asparagine synthase, glutamine-hydrolyzing BED35_08015 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED35_08015 IPR017932 Glutamine amidotransferase type 2 domain BED35_08015 IPR029055 Nucleophile aminohydrolases, N-terminal BED35_08020 IPR006357 HAD-superfamily hydrolase, subfamily IIA BED35_08020 IPR023214 HAD-like domain BED35_08020 IPR036412 BED35_08020 BED35_08025 IPR000600 ROK BED35_08025 IPR000835 MarR-type HTH domain BED35_08025 IPR036388 BED35_08025 BED35_08025 IPR036390 BED35_08025 BED35_08030 IPR003764 N-acetylglucosamine-6-phosphate deacetylase BED35_08030 IPR006680 Amidohydrolase 1 BED35_08030 IPR011059 Metal-dependent hydrolase, composite domain BED35_08030 IPR032466 BED35_08030 BED35_08035 IPR004547 Glucosamine-6-phosphate isomerase BED35_08035 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase BED35_08035 IPR018321 Glucosamine-6-phosphate isomerase, conserved site BED35_08035 IPR037171 BED35_08035 BED35_08045 IPR000924 Glutamyl/glutaminyl-tRNA synthetase BED35_08045 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site BED35_08045 IPR004514 Glutamine-tRNA synthetase BED35_08045 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain BED35_08045 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED35_08045 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain BED35_08045 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain BED35_08045 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain BED35_08045 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain BED35_08045 IPR022861 Glutamine-tRNA ligase, bacterial BED35_08050 IPR005318 Outer membrane porin, bacterial BED35_08050 IPR023614 Porin domain BED35_08055 IPR025727 YbfN-like lipoprotein BED35_08060 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain BED35_08060 IPR004867 Chitobiase/beta-hexosaminidase C-terminal domain BED35_08060 IPR008965 Carbohydrate-binding domain BED35_08060 IPR012291 Cellulose-binding family II/chitobiase, carbohydrate-binding domain BED35_08060 IPR013783 Immunoglobulin-like fold BED35_08060 IPR014756 Immunoglobulin E-set BED35_08060 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal BED35_08060 IPR015883 Glycoside hydrolase family 20, catalytic core BED35_08060 IPR017853 Glycoside hydrolase, superfamily BED35_08060 IPR025705 Beta-hexosaminidase BED35_08060 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like BED35_08065 IPR002481 Ferric-uptake regulator BED35_08065 IPR036388 BED35_08065 BED35_08065 IPR036390 BED35_08065 BED35_08070 IPR001226 Flavodoxin, conserved site BED35_08070 IPR008254 Flavodoxin/nitric oxide synthase BED35_08070 IPR010086 Flavodoxin, long chain BED35_08070 IPR029039 Flavoprotein-like BED35_08075 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding BED35_08075 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BED35_08075 IPR004090 Chemotaxis methyl-accepting receptor BED35_08075 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site BED35_08080 IPR002145 Ribbon-helix-helix protein, copG BED35_08085 IPR000073 Alpha/beta hydrolase fold-1 BED35_08085 IPR029058 Alpha/Beta hydrolase fold BED35_08090 IPR005621 Regulation modulator SeqA BED35_08090 IPR010985 Ribbon-helix-helix BED35_08090 IPR013321 Arc-type ribbon-helix-helix BED35_08090 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain BED35_08090 IPR033761 BED35_08090 BED35_08090 IPR036835 BED35_08090 BED35_08095 IPR005843 Alpha-D-phosphohexomutase, C-terminal BED35_08095 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I BED35_08095 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II BED35_08095 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III BED35_08095 IPR005852 Phosphoglucomutase, alpha-D-glucose specific BED35_08095 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III BED35_08095 IPR016066 Alpha-D-phosphohexomutase, conserved site BED35_08095 IPR036900 BED35_08095 BED35_08105 IPR000620 Drug/metabolite transporter BED35_08110 IPR001789 Signal transduction response regulator, receiver domain BED35_08110 IPR001867 Signal transduction response regulator, C-terminal BED35_08110 IPR011006 CheY-like superfamily BED35_08110 IPR036388 BED35_08110 BED35_08115 IPR003018 GAF domain BED35_08115 IPR003594 Histidine kinase-like ATPase, C-terminal domain BED35_08115 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain BED35_08115 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal BED35_08115 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BED35_08115 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED35_08115 IPR025201 Sensor protein KdpD, transmembrane domain BED35_08115 IPR029016 GAF domain-like BED35_08115 IPR036097 BED35_08115 BED35_08115 IPR036890 BED35_08115 BED35_08115 IPR038318 BED35_08115 BED35_08120 IPR003820 Potassium-transporting ATPase C chain BED35_08125 IPR001757 Cation-transporting P-type ATPase BED35_08125 IPR006391 Potassium-transporting P-type ATPase, B chain, subfamily IA BED35_08125 IPR008250 P-type ATPase, A domain BED35_08125 IPR018303 P-type ATPase, phosphorylation site BED35_08125 IPR023298 P-type ATPase, transmembrane domain BED35_08125 IPR023299 P-type ATPase, cytoplasmic domain N BED35_08125 IPR036412 BED35_08125 BED35_08130 IPR004623 Potassium-transporting ATPase A chain BED35_08135 IPR011726 K+ transporting P-type ATPase, F subunit BED35_08140 IPR019663 Uncharacterised protein YbfA BED35_08150 IPR003996 RTX toxin-activating protein C, bacteria BED35_08160 IPR013560 Domain of unknown function DUF1722 BED35_08165 IPR002081 Cryptochrome/DNA photolyase, class 1 BED35_08165 IPR005101 DNA photolyase, FAD-binding/Cryptochrome, C-terminal BED35_08165 IPR006050 DNA photolyase, N-terminal BED35_08165 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED35_08165 IPR018394 Cryptochrome/DNA photolyase, class 1 conserved site, C-terminal BED35_08165 IPR036134 BED35_08165 BED35_08165 IPR036155 BED35_08165 BED35_08170 IPR000396 Cyclic-AMP phosphodiesterase, class-II BED35_08170 IPR024225 Cyclic-AMP phosphodiesterase class-II, conserved site BED35_08170 IPR036866 BED35_08170 BED35_08175 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 BED35_08175 IPR036069 BED35_08175 BED35_08180 IPR003833 Allophanate hydrolase subunit 1 BED35_08180 IPR010016 Sensor histidine kinase inhibitor, KipI family BED35_08180 IPR029000 Cyclophilin-like domain BED35_08185 IPR003778 Allophanate hydrolase subunit 2 BED35_08185 IPR029000 Cyclophilin-like domain BED35_08190 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF BED35_08190 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel BED35_08195 IPR010374 Protein of unknown function DUF969 BED35_08200 IPR009323 Protein of unknown function DUF979 BED35_08205 IPR000816 Peptidase C15, pyroglutamyl peptidase I BED35_08205 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like BED35_08205 IPR029762 Pyroglutamyl peptidase I, bacterial-type BED35_08205 IPR033693 BED35_08205 BED35_08205 IPR033694 BED35_08205 BED35_08205 IPR036440 BED35_08205 BED35_08210 IPR002020 Citrate synthase-like BED35_08210 IPR010953 Citrate synthase, type I BED35_08210 IPR016142 Citrate synthase-like, large alpha subdomain BED35_08210 IPR016143 Citrate synthase-like, small alpha subdomain BED35_08210 IPR019810 Citrate synthase active site BED35_08210 IPR024176 Citrate synthase, bacterial-type BED35_08210 IPR036969 BED35_08210 BED35_08215 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit BED35_08215 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit BED35_08215 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site BED35_08215 IPR034804 BED35_08215 BED35_08220 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor BED35_08220 IPR034804 BED35_08220 BED35_08225 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site BED35_08225 IPR003953 FAD binding domain BED35_08225 IPR011281 Succinate dehydrogenase, flavoprotein subunit BED35_08225 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit BED35_08225 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal BED35_08225 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain BED35_08225 IPR036188 BED35_08225 BED35_08225 IPR037099 BED35_08225 BED35_08230 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein BED35_08230 IPR009051 Alpha-helical ferredoxin BED35_08230 IPR012675 Beta-grasp domain BED35_08230 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BED35_08230 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal BED35_08230 IPR036010 BED35_08230 BED35_08235 IPR001017 Dehydrogenase, E1 component BED35_08235 IPR005475 Transketolase-like, pyrimidine-binding domain BED35_08235 IPR011603 2-oxoglutarate dehydrogenase E1 component BED35_08235 IPR029061 Thiamin diphosphate-binding fold BED35_08235 IPR031717 BED35_08235 BED35_08235 IPR032106 BED35_08235 BED35_08240 IPR000089 Biotin/lipoyl attachment BED35_08240 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain BED35_08240 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site BED35_08240 IPR004167 E3 binding BED35_08240 IPR006255 Dihydrolipoamide succinyltransferase BED35_08240 IPR011053 Single hybrid motif BED35_08240 IPR023213 Chloramphenicol acetyltransferase-like domain BED35_08240 IPR036625 BED35_08240 BED35_08245 IPR005809 Succinyl-CoA synthetase, beta subunit BED35_08245 IPR005811 ATP-citrate lyase/succinyl-CoA ligase BED35_08245 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type BED35_08245 IPR013815 ATP-grasp fold, subdomain 1 BED35_08245 IPR016102 Succinyl-CoA synthetase-like BED35_08245 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site BED35_08250 IPR003781 CoA-binding BED35_08250 IPR005810 Succinyl-CoA ligase, alpha subunit BED35_08250 IPR005811 ATP-citrate lyase/succinyl-CoA ligase BED35_08250 IPR016102 Succinyl-CoA synthetase-like BED35_08250 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site BED35_08250 IPR033847 BED35_08250 BED35_08250 IPR036291 BED35_08250 BED35_08255 IPR004843 Calcineurin-like phosphoesterase domain, apaH type BED35_08255 IPR006146 5'-Nucleotidase, conserved site BED35_08255 IPR006179 5'-Nucleotidase/apyrase BED35_08255 IPR008334 5'-Nucleotidase, C-terminal BED35_08255 IPR029052 Metallo-dependent phosphatase-like BED35_08255 IPR036907 BED35_08255 BED35_08260 IPR002585 Cytochrome d ubiquinol oxidase, subunit I BED35_08265 IPR003317 Cytochrome d ubiquinol oxidase, subunit II BED35_08270 IPR011724 Cyd operon protein YbgT BED35_08270 IPR012994 Membrane bound YbgT-like BED35_08275 IPR011846 Cyd operon protein YbgE BED35_08280 IPR006683 Thioesterase superfamily BED35_08280 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family BED35_08280 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site BED35_08280 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase BED35_08280 IPR029069 HotDog domain BED35_08285 IPR002898 MotA/TolQ/ExbB proton channel BED35_08285 IPR014163 Tol-Pal system, TolQ BED35_08290 IPR003400 Biopolymer transport protein ExbD/TolR BED35_08290 IPR014168 Biopolymer transport, TolR BED35_08295 IPR014161 Tol-Pal system, TolA BED35_08300 IPR007195 TolB, N-terminal BED35_08300 IPR011042 Six-bladed beta-propeller, TolB-like BED35_08300 IPR011659 WD40-like Beta Propeller BED35_08300 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB BED35_08300 IPR036752 BED35_08300 BED35_08305 IPR006664 Outer membrane protein, bacterial BED35_08305 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal BED35_08305 IPR006690 Outer membrane protein, OmpA-like, conserved site BED35_08305 IPR014169 Peptidoglycan-associated lipoprotein BED35_08305 IPR036737 BED35_08305 BED35_08305 IPR039001 BED35_08305 BED35_08310 IPR011990 Tetratricopeptide-like helical domain BED35_08310 IPR014162 Tol-Pal system, YbgF BED35_08310 IPR019734 Tetratricopeptide repeat BED35_08310 IPR032519 BED35_08310 BED35_08310 IPR034706 BED35_08310 BED35_08335 IPR003473 Quinolinate synthetase A BED35_08335 IPR023513 Quinolinate synthase A, type 1 BED35_08335 IPR036094 BED35_08335 BED35_08340 IPR006419 Nicotinamide mononucleotide transporter PnuC BED35_08345 IPR002524 Cation efflux protein BED35_08345 IPR027469 Cation efflux protein transmembrane domain BED35_08345 IPR036837 BED35_08345 BED35_08350 IPR006218 DAHP synthetase I/KDSA BED35_08350 IPR006219 DHAP synthase, class 1 BED35_08350 IPR013785 Aldolase-type TIM barrel BED35_08355 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site BED35_08355 IPR005952 Phosphoglycerate mutase 1 BED35_08355 IPR013078 Histidine phosphatase superfamily, clade-1 BED35_08355 IPR029033 Histidine phosphatase superfamily BED35_08360 IPR001604 DNA/RNA non-specific endonuclease BED35_08360 IPR020821 Extracellular Endonuclease, subunit A BED35_08365 IPR010982 Lambda repressor-like, DNA-binding domain BED35_08370 IPR000209 Peptidase S8/S53 domain BED35_08370 IPR022398 Peptidase S8, subtilisin, His-active site BED35_08370 IPR023830 Peptidase S8A, PatG BED35_08370 IPR036852 BED35_08370 BED35_08375 IPR011690 Phosphate-starvation-induced PsiF repeat BED35_08380 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase BED35_08380 IPR011013 Galactose mutarotase-like domain BED35_08380 IPR013458 Aldose 1-epimerase, bacterial BED35_08380 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup BED35_08380 IPR015443 Aldose 1-epimerase BED35_08380 IPR018052 Aldose 1-epimerase, conserved site BED35_08385 IPR000705 Galactokinase BED35_08385 IPR006203 GHMP kinase, ATP-binding, conserved site BED35_08385 IPR006204 GHMP kinase N-terminal domain BED35_08385 IPR006206 Mevalonate/galactokinase BED35_08385 IPR013750 GHMP kinase, C-terminal domain BED35_08385 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BED35_08385 IPR019539 Galactokinase galactose-binding domain BED35_08385 IPR019741 Galactokinase, conserved site BED35_08385 IPR020568 Ribosomal protein S5 domain 2-type fold BED35_08385 IPR022963 Galactokinase, bacterial BED35_08385 IPR036554 BED35_08385 BED35_08390 IPR001937 Galactose-1-phosphate uridyl transferase, class I BED35_08390 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal BED35_08390 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal BED35_08390 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site BED35_08390 IPR036265 BED35_08390 BED35_08395 IPR005886 UDP-glucose 4-epimerase GalE BED35_08395 IPR016040 NAD(P)-binding domain BED35_08395 IPR036291 BED35_08395 BED35_08400 IPR003675 CAAX amino terminal protease BED35_08405 IPR003439 ABC transporter-like BED35_08405 IPR003593 AAA+ ATPase domain BED35_08405 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_08410 IPR000847 Transcription regulator HTH, LysR BED35_08410 IPR003725 Molybdenum-binding protein, N-terminal BED35_08410 IPR004606 Molybdenum-pterin binding BED35_08410 IPR005116 Transport-associated OB, type 1 BED35_08410 IPR008995 Molybdate/tungstate binding, C-terminal BED35_08410 IPR016462 Molybdate-dependent transcriptional regulator, ModE BED35_08410 IPR036388 BED35_08410 BED35_08410 IPR036390 BED35_08410 BED35_08415 IPR019702 Protein of unknown function DUF2592 BED35_08420 IPR005950 Molybdenum ABC transporter, periplasmic binding protein BED35_08425 IPR000515 MetI-like domain BED35_08425 IPR011867 Molybdate ABC transporter, permease protein BED35_08425 IPR035906 BED35_08425 BED35_08430 IPR003439 ABC transporter-like BED35_08430 IPR003593 AAA+ ATPase domain BED35_08430 IPR004606 Molybdenum-pterin binding BED35_08430 IPR005116 Transport-associated OB, type 1 BED35_08430 IPR008995 Molybdate/tungstate binding, C-terminal BED35_08430 IPR011868 Molybdate ABC transporter, ATP-binding protein BED35_08430 IPR017871 ABC transporter, conserved site BED35_08430 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_08435 IPR000150 Cof protein BED35_08435 IPR006379 HAD-superfamily hydrolase, subfamily IIB BED35_08435 IPR023214 HAD-like domain BED35_08435 IPR036412 BED35_08435 BED35_08440 IPR011045 Nitrous oxide reductase, N-terminal BED35_08440 IPR015943 WD40/YVTN repeat-like-containing domain BED35_08440 IPR019405 Lactonase, 7-bladed beta propeller BED35_08440 IPR022528 6-phosphogluconolactonase, YbhE-type BED35_08445 IPR005814 Aminotransferase class-III BED35_08445 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA BED35_08445 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BED35_08445 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 BED35_08445 IPR015424 Pyridoxal phosphate-dependent transferase BED35_08450 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB BED35_08450 IPR006638 Elongator protein 3/MiaB/NifB BED35_08450 IPR007197 Radical SAM BED35_08450 IPR010722 Biotin and thiamin synthesis-associated domain BED35_08450 IPR013785 Aldolase-type TIM barrel BED35_08450 IPR024177 Biotin synthase BED35_08455 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site BED35_08455 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type BED35_08455 IPR004839 Aminotransferase, class I/classII BED35_08455 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BED35_08455 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 BED35_08455 IPR015424 Pyridoxal phosphate-dependent transferase BED35_08455 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria BED35_08460 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC BED35_08460 IPR013216 Methyltransferase type 11 BED35_08460 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BED35_08465 IPR004472 Dethiobiotin synthase BioD BED35_08465 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_08470 IPR003439 ABC transporter-like BED35_08470 IPR003593 AAA+ ATPase domain BED35_08470 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_08475 IPR001650 Helicase, C-terminal BED35_08475 IPR001943 UVR domain BED35_08475 IPR004807 UvrABC system, subunit B BED35_08475 IPR006935 Helicase/UvrB domain BED35_08475 IPR014001 Helicase, superfamily 1/2, ATP-binding domain BED35_08475 IPR024759 UvrB, YAD/RRR-motif-containing domain BED35_08475 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_08475 IPR036876 BED35_08475 BED35_08480 IPR018668 Protein of unknown function DUF2132 BED35_08480 IPR036361 BED35_08480 BED35_08485 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 BED35_08485 IPR010119 Gluconeogenesis factor BED35_08485 IPR038136 BED35_08485 BED35_08490 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site BED35_08490 IPR006638 Elongator protein 3/MiaB/NifB BED35_08490 IPR007197 Radical SAM BED35_08490 IPR010505 Molybdenum cofactor synthesis C-terminal BED35_08490 IPR013483 Molybdenum cofactor biosynthesis protein A BED35_08490 IPR013785 Aldolase-type TIM barrel BED35_08495 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain BED35_08495 IPR023045 Molybdenum cofactor biosynthesis C BED35_08495 IPR036522 BED35_08495 BED35_08500 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 BED35_08500 IPR012675 Beta-grasp domain BED35_08500 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp BED35_08505 IPR003448 Molybdopterin biosynthesis MoaE BED35_08505 IPR036563 BED35_08505 BED35_08510 IPR006214 Bax inhibitor 1-related BED35_08515 IPR000412 ABC-2 transporter BED35_08525 IPR003439 ABC transporter-like BED35_08525 IPR003593 AAA+ ATPase domain BED35_08525 IPR017871 ABC transporter, conserved site BED35_08525 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_08530 IPR022936 Uncharacterised protein family UPF0194, membrane protein YbhG BED35_08530 IPR032317 BED35_08530 BED35_08535 IPR001647 DNA-binding HTH domain, TetR-type BED35_08535 IPR009057 Homeodomain-like BED35_08535 IPR015292 Transcription regulator YbiH, C-terminal BED35_08535 IPR023772 DNA-binding HTH domain, TetR-type, conserved site BED35_08535 IPR036271 BED35_08535 BED35_08540 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site BED35_08540 IPR001650 Helicase, C-terminal BED35_08540 IPR011545 DEAD/DEAH box helicase domain BED35_08540 IPR014001 Helicase, superfamily 1/2, ATP-binding domain BED35_08540 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_08540 IPR028622 ATP-dependent RNA helicase RhlE BED35_08545 IPR001269 tRNA-dihydrouridine synthase BED35_08545 IPR013785 Aldolase-type TIM barrel BED35_08545 IPR018517 tRNA-dihydrouridine synthase, conserved site BED35_08545 IPR032886 BED35_08545 BED35_08555 IPR000644 CBS domain BED35_08555 IPR006667 SLC41 divalent cation transporters, integral membrane domain BED35_08555 IPR036739 BED35_08555 BED35_08555 IPR038048 BED35_08555 BED35_08560 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal BED35_08560 IPR012338 Beta-lactamase/transpeptidase-like BED35_08560 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A BED35_08565 IPR006094 FAD linked oxidase, N-terminal BED35_08565 IPR012256 D-lactate dehydrogenase BED35_08565 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal BED35_08565 IPR016164 FAD-linked oxidase-like, C-terminal BED35_08565 IPR016167 FAD-binding, type 2, subdomain 1 BED35_08565 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 BED35_08565 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 BED35_08565 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 BED35_08565 IPR036318 BED35_08565 BED35_08570 IPR023577 CYTH-like domain BED35_08570 IPR033469 BED35_08570 BED35_08575 IPR002711 HNH endonuclease BED35_08575 IPR003615 HNH nuclease BED35_08580 IPR020941 Suppressor of fused-like domain BED35_08585 IPR007341 Transglycosylase-associated protein BED35_08590 IPR003439 ABC transporter-like BED35_08590 IPR003593 AAA+ ATPase domain BED35_08590 IPR012693 ABC transporter, phosphonate import, PhnC BED35_08590 IPR017871 ABC transporter, conserved site BED35_08590 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_08595 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic protein BED35_08595 IPR017797 Phosphonate ABC transporter, periplasmic substrate-binding protein BED35_08600 IPR000515 MetI-like domain BED35_08600 IPR005769 ABC transporter, permease PhnE/PtxC BED35_08600 IPR035906 BED35_08600 BED35_08605 IPR000515 MetI-like domain BED35_08605 IPR005769 ABC transporter, permease PhnE/PtxC BED35_08605 IPR035906 BED35_08605 BED35_08610 IPR009921 Domain of unknown function DUF1456 BED35_08615 IPR000709 Leu/Ile/Val-binding protein BED35_08615 IPR017777 ABC transporter, urea, substrate-binding, UrtA BED35_08615 IPR028082 Periplasmic binding protein-like I BED35_08620 IPR001851 ABC transporter, permease BED35_08620 IPR011989 Armadillo-like helical BED35_08620 IPR016024 Armadillo-type fold BED35_08620 IPR017779 ABC transporter, urea, permease protein, UrtB BED35_08625 IPR001851 ABC transporter, permease BED35_08625 IPR017778 ABC transporter, urea, permease protein, UrtC BED35_08630 IPR003439 ABC transporter-like BED35_08630 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD BED35_08630 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_08630 IPR032823 BED35_08630 BED35_08635 IPR003439 ABC transporter-like BED35_08635 IPR003593 AAA+ ATPase domain BED35_08635 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE BED35_08635 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_08640 IPR001307 Thiosulphate sulfurtransferase, conserved site BED35_08640 IPR001763 Rhodanese-like domain BED35_08640 IPR036873 BED35_08640 BED35_08650 IPR005804 Fatty acid desaturase, type 1 BED35_08655 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain BED35_08665 IPR003439 ABC transporter-like BED35_08665 IPR003593 AAA+ ATPase domain BED35_08665 IPR017871 ABC transporter, conserved site BED35_08665 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_08670 IPR000515 MetI-like domain BED35_08670 IPR035906 BED35_08670 BED35_08680 IPR002347 Glucose/ribitol dehydrogenase BED35_08680 IPR036291 BED35_08680 BED35_08685 IPR000847 Transcription regulator HTH, LysR BED35_08685 IPR005119 LysR, substrate-binding BED35_08685 IPR036388 BED35_08685 BED35_08685 IPR036390 BED35_08685 BED35_08695 IPR000620 Drug/metabolite transporter BED35_08700 IPR008397 Alginate lyase domain BED35_08700 IPR008929 Chondroitin AC/alginate lyase BED35_08705 IPR001702 Porin, Gram-negative type BED35_08705 IPR001897 Porin, gammaproteobacterial BED35_08705 IPR013793 Porin, Gram-negative type, conserved site BED35_08705 IPR023614 Porin domain BED35_08710 IPR006554 Helicase-like, DEXD box c2 type BED35_08710 IPR006555 ATP-dependent helicase, C-terminal BED35_08710 IPR010614 DEAD2 BED35_08710 IPR014001 Helicase, superfamily 1/2, ATP-binding domain BED35_08710 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_08710 IPR039000 BED35_08710 BED35_08715 IPR000425 Major intrinsic protein BED35_08715 IPR022357 Major intrinsic protein, conserved site BED35_08715 IPR023271 Aquaporin-like BED35_08715 IPR023743 Aquaporin Z BED35_08720 IPR017459 Glycosyl transferase family 3, N-terminal domain BED35_08720 IPR035902 BED35_08720 BED35_08720 IPR036320 BED35_08720 BED35_08730 IPR010854 Domain of unknown function DUF1471 BED35_08730 IPR025543 Dodecin-like BED35_08730 IPR036275 BED35_08730 BED35_08735 IPR002563 Flavin reductase-like, FMN-binding BED35_08735 IPR012349 FMN-binding split barrel BED35_08740 IPR010286 Ribosomal RNA large subunit methyltransferase F-like BED35_08740 IPR016909 Ribosomal RNA large subunit methyltransferase F BED35_08740 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BED35_08745 IPR000014 PAS domain BED35_08745 IPR001610 PAC motif BED35_08745 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BED35_08745 IPR013655 PAS fold-3 BED35_08745 IPR035965 BED35_08745 BED35_08750 IPR003439 ABC transporter-like BED35_08750 IPR003593 AAA+ ATPase domain BED35_08750 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_08750 IPR030679 BED35_08750 BED35_08755 IPR000515 MetI-like domain BED35_08755 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family BED35_08755 IPR035906 BED35_08755 BED35_08760 IPR001320 Ionotropic glutamate receptor BED35_08760 IPR001638 Extracellular solute-binding protein, family 3 BED35_08760 IPR018313 Extracellular solute-binding protein, family 3, conserved site BED35_08765 IPR000962 Zinc finger, DksA/TraR C4-type BED35_08770 IPR002177 DNA-binding protein Dps BED35_08770 IPR008331 Ferritin/DPS protein domain BED35_08770 IPR009078 Ferritin-like superfamily BED35_08770 IPR012347 Ferritin-related BED35_08770 IPR023067 DNA protection during starvation protein, gammaproteobacteria BED35_08770 IPR023188 DNA-binding protein Dps, conserved site BED35_08775 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal BED35_08775 IPR023506 Trans-aconitate 2-methyltransferase BED35_08775 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BED35_08780 IPR018764 Anti-sigma K factor RskA BED35_08785 IPR007627 RNA polymerase sigma-70 region 2 BED35_08785 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 BED35_08785 IPR013324 RNA polymerase sigma factor, region 3/4 BED35_08785 IPR013325 RNA polymerase sigma factor, region 2 BED35_08785 IPR014284 RNA polymerase sigma-70 like domain BED35_08785 IPR036388 BED35_08785 BED35_08790 IPR000782 FAS1 domain BED35_08790 IPR036378 BED35_08790 BED35_08795 IPR000182 GNAT domain BED35_08795 IPR016181 Acyl-CoA N-acyltransferase BED35_08800 IPR000620 Drug/metabolite transporter BED35_08810 IPR000758 Virulence-related outer membrane protein BED35_08810 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel BED35_08810 IPR027385 Outer membrane protein beta-barrel BED35_08815 IPR000073 Alpha/beta hydrolase fold-1 BED35_08815 IPR029058 Alpha/Beta hydrolase fold BED35_08820 IPR002524 Cation efflux protein BED35_08820 IPR027469 Cation efflux protein transmembrane domain BED35_08830 IPR003439 ABC transporter-like BED35_08830 IPR003593 AAA+ ATPase domain BED35_08830 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_08830 IPR032781 BED35_08830 BED35_08835 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED35_08835 IPR003346 Transposase, IS116/IS110/IS902 BED35_08840 IPR000594 UBA/THIF-type NAD/FAD binding fold BED35_08840 IPR012730 Molybdopterin synthase sulfurylase MoeB BED35_08840 IPR035985 BED35_08840 BED35_08845 IPR001453 Molybdopterin binding domain BED35_08845 IPR005110 MoeA, N-terminal and linker domain BED35_08845 IPR005111 MoeA, C-terminal, domain IV BED35_08845 IPR008284 Molybdenum cofactor biosynthesis, conserved site BED35_08845 IPR036135 BED35_08845 BED35_08845 IPR036425 BED35_08845 BED35_08845 IPR036688 BED35_08845 BED35_08850 IPR010323 Protein of unknown function DUF924 BED35_08850 IPR011990 Tetratricopeptide-like helical domain BED35_08855 IPR007197 Radical SAM BED35_08855 IPR013785 Aldolase-type TIM barrel BED35_08855 IPR023885 4Fe4S-binding SPASM domain BED35_08860 IPR003439 ABC transporter-like BED35_08860 IPR003593 AAA+ ATPase domain BED35_08860 IPR017871 ABC transporter, conserved site BED35_08860 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_08880 IPR000801 Putative esterase BED35_08880 IPR014186 S-formylglutathione hydrolase BED35_08880 IPR029058 Alpha/Beta hydrolase fold BED35_08885 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site BED35_08885 IPR011032 GroES (chaperonin 10)-like BED35_08885 IPR013149 Alcohol dehydrogenase, C-terminal BED35_08885 IPR013154 Alcohol dehydrogenase GroES-like BED35_08885 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase BED35_08885 IPR020843 Polyketide synthase, enoylreductase BED35_08885 IPR036291 BED35_08885 BED35_08890 IPR000847 Transcription regulator HTH, LysR BED35_08890 IPR005119 LysR, substrate-binding BED35_08890 IPR036388 BED35_08890 BED35_08890 IPR036390 BED35_08890 BED35_08895 IPR010645 Domain of unknown function DUF1228 BED35_08895 IPR036259 BED35_08895 BED35_08900 IPR001474 GTP cyclohydrolase I BED35_08900 IPR018234 GTP cyclohydrolase I, conserved site BED35_08900 IPR020602 GTP cyclohydrolase I domain BED35_08905 IPR007349 Domain of unknown function DUF418 BED35_08910 IPR000843 Transcription regulator HTH, LacI BED35_08910 IPR010982 Lambda repressor-like, DNA-binding domain BED35_08910 IPR028082 Periplasmic binding protein-like I BED35_08915 IPR025997 Periplasmic binding protein domain BED35_08915 IPR028082 Periplasmic binding protein-like I BED35_08920 IPR003439 ABC transporter-like BED35_08920 IPR003593 AAA+ ATPase domain BED35_08920 IPR017871 ABC transporter, conserved site BED35_08920 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_08925 IPR001851 ABC transporter, permease BED35_08930 IPR002078 RNA polymerase sigma factor 54 interaction domain BED35_08930 IPR003018 GAF domain BED35_08930 IPR003593 AAA+ ATPase domain BED35_08930 IPR009057 Homeodomain-like BED35_08930 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BED35_08930 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BED35_08930 IPR025944 Sigma-54 interaction domain, conserved site BED35_08930 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_08930 IPR029016 GAF domain-like BED35_08940 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BED35_08940 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BED35_08945 IPR000671 Peptidase A31 family BED35_08945 IPR004420 Peptidase A31, hydrogenase maturation protease HycI BED35_08945 IPR023430 Peptidase HybD-like domain BED35_08950 IPR010005 Formate hydrogenlyase maturation HycH BED35_08955 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit BED35_08955 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit BED35_08960 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BED35_08960 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BED35_08965 IPR001135 NADH-quinone oxidoreductase, subunit D BED35_08965 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit BED35_08965 IPR001501 Nickel-dependent hydrogenase, large subunit BED35_08965 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site BED35_08965 IPR029014 NiFe hydrogenase-like BED35_08965 IPR037232 BED35_08965 BED35_08965 IPR038290 BED35_08965 BED35_08970 IPR001516 NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal BED35_08970 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase BED35_08975 IPR039428 BED35_08975 BED35_08980 IPR001516 NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal BED35_08980 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase BED35_08985 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H BED35_08985 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site BED35_08990 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase BED35_08990 IPR003918 NADH:ubiquinone oxidoreductase BED35_08995 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BED35_08995 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BED35_09000 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF BED35_09000 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site BED35_09005 IPR001109 Hydrogenase expression/formation protein, HupF/HypC BED35_09005 IPR019812 Hydrogenase assembly chaperone, conserved site BED35_09005 IPR037254 BED35_09005 BED35_09010 IPR003848 Domain of unknown function DUF218 BED35_09010 IPR023604 Uncharacterised protein family SanA BED35_09015 IPR001891 Malic oxidoreductase BED35_09015 IPR012301 Malic enzyme, N-terminal domain BED35_09015 IPR012302 Malic enzyme, NAD-binding BED35_09015 IPR015884 Malic enzyme, conserved site BED35_09015 IPR023667 NAD-dependent malic enzyme, proteobacteria BED35_09015 IPR036291 BED35_09015 BED35_09015 IPR037062 BED35_09015 BED35_09025 IPR002125 CMP/dCMP deaminase, zinc-binding BED35_09025 IPR006263 Cytidine deaminase, homodimeric BED35_09025 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain BED35_09025 IPR016192 APOBEC/CMP deaminase, zinc-binding BED35_09025 IPR016193 Cytidine deaminase-like BED35_09025 IPR020797 Cytidine deaminase, bacteria BED35_09030 IPR005261 Conserved hypothetical protein CHP00659 BED35_09030 IPR007300 CidB/LrgB family BED35_09035 IPR005538 LrgA/CidA family BED35_09035 IPR022957 Uncharacterised protein family UPF0299 BED35_09040 IPR011701 Major facilitator superfamily BED35_09040 IPR036259 BED35_09040 BED35_09045 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain BED35_09045 IPR013211 LVIVD BED35_09050 IPR025997 Periplasmic binding protein domain BED35_09050 IPR028082 Periplasmic binding protein-like I BED35_09060 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site BED35_09060 IPR002547 tRNA-binding domain BED35_09060 IPR004495 Methionyl-tRNA synthetase, class Ia, beta subunit, C-terminal BED35_09060 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding BED35_09060 IPR012340 Nucleic acid-binding, OB-fold BED35_09060 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED35_09060 IPR014758 Methionyl-tRNA synthetase BED35_09060 IPR015413 Methionyl/Leucyl tRNA synthetase BED35_09060 IPR023458 Methionine-tRNA ligase, type 1 BED35_09060 IPR029038 Methionyl-tRNA synthetase, Zn-domain BED35_09060 IPR033911 BED35_09060 BED35_09065 IPR000808 Mrp, conserved site BED35_09065 IPR019591 Mrp/NBP35 ATP-binding protein BED35_09065 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_09065 IPR033756 BED35_09065 BED35_09070 IPR000764 Uridine kinase like BED35_09070 IPR006083 Phosphoribulokinase/uridine kinase BED35_09070 IPR026008 Uridine kinase BED35_09070 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_09075 IPR011962 Deoxycytidine triphosphate deaminase BED35_09075 IPR029054 dUTPase-like BED35_09075 IPR036157 BED35_09075 BED35_09080 IPR007844 AsmA BED35_09080 IPR032712 BED35_09080 BED35_09085 IPR004669 C4-dicarboxylate anaerobic carrier BED35_09085 IPR018385 C4-dicarboxylate anaerobic carrier-like BED35_09090 IPR000644 CBS domain BED35_09090 IPR005170 Transporter-associated domain BED35_09090 IPR005496 Integral membrane protein TerC BED35_09090 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 BED35_09090 IPR036318 BED35_09090 BED35_09095 IPR008490 Transposase InsH, N-terminal BED35_09095 IPR025668 Transposase DDE domain BED35_09100 IPR005835 Nucleotidyl transferase BED35_09100 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form BED35_09100 IPR029044 Nucleotide-diphospho-sugar transferases BED35_09105 IPR001173 Glycosyltransferase 2-like BED35_09105 IPR029044 Nucleotide-diphospho-sugar transferases BED35_09110 IPR001173 Glycosyltransferase 2-like BED35_09110 IPR006446 Rhamnosyltransferase BED35_09110 IPR029044 Nucleotide-diphospho-sugar transferases BED35_09115 IPR013525 ABC-2 type transporter BED35_09120 IPR003439 ABC transporter-like BED35_09120 IPR003593 AAA+ ATPase domain BED35_09120 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_09125 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related BED35_09125 IPR011051 RmlC-like cupin domain BED35_09125 IPR014710 RmlC-like jelly roll fold BED35_09130 IPR029903 BED35_09130 BED35_09130 IPR036291 BED35_09130 BED35_09150 IPR001207 Transposase, mutator type BED35_09175 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type BED35_09175 IPR005835 Nucleotidyl transferase BED35_09175 IPR029044 Nucleotide-diphospho-sugar transferases BED35_09180 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type BED35_09180 IPR005835 Nucleotidyl transferase BED35_09180 IPR029044 Nucleotide-diphospho-sugar transferases BED35_09185 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating BED35_09185 IPR006114 6-phosphogluconate dehydrogenase, C-terminal BED35_09185 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding BED35_09185 IPR006183 BED35_09185 BED35_09185 IPR006184 6-phosphogluconate-binding site BED35_09185 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like BED35_09185 IPR013328 Dehydrogenase, multihelical BED35_09185 IPR036291 BED35_09185 BED35_09190 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain BED35_09190 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase BED35_09190 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like BED35_09190 IPR023019 Histidine biosynthesis bifunctional protein HisIE BED35_09190 IPR038019 BED35_09190 BED35_09195 IPR004651 Histidine biosynthesis, HisF BED35_09195 IPR006062 Histidine biosynthesis BED35_09195 IPR011060 Ribulose-phosphate binding barrel BED35_09195 IPR013785 Aldolase-type TIM barrel BED35_09200 IPR006062 Histidine biosynthesis BED35_09200 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA BED35_09200 IPR011060 Ribulose-phosphate binding barrel BED35_09200 IPR013785 Aldolase-type TIM barrel BED35_09200 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase BED35_09205 IPR010139 Imidazole glycerol phosphate synthase, subunit H BED35_09205 IPR017926 Glutamine amidotransferase BED35_09205 IPR029062 Class I glutamine amidotransferase-like BED35_09210 IPR000807 Imidazoleglycerol-phosphate dehydratase BED35_09210 IPR005954 Histidinol-phosphatase BED35_09210 IPR006543 Histidinol-phosphate phosphatase BED35_09210 IPR006549 HAD-superfamily hydrolase,subfamily IIIA BED35_09210 IPR013954 Polynucleotide kinase 3 phosphatase BED35_09210 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site BED35_09210 IPR020566 Histidine biosynthesis bifunctional protein HisB BED35_09210 IPR020568 Ribosomal protein S5 domain 2-type fold BED35_09210 IPR023214 HAD-like domain BED35_09210 IPR036412 BED35_09210 BED35_09210 IPR038494 BED35_09210 BED35_09215 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site BED35_09215 IPR004839 Aminotransferase, class I/classII BED35_09215 IPR005861 Histidinol-phosphate aminotransferase family BED35_09215 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BED35_09215 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 BED35_09215 IPR015424 Pyridoxal phosphate-dependent transferase BED35_09220 IPR001692 Histidinol dehydrogenase, conserved site BED35_09220 IPR012131 Histidinol dehydrogenase BED35_09220 IPR016161 Aldehyde/histidinol dehydrogenase BED35_09220 IPR022695 Histidinol dehydrogenase, monofunctional BED35_09225 IPR011322 Nitrogen regulatory PII-like, alpha/beta BED35_09225 IPR013115 Histidine biosynthesis HisG, C-terminal BED35_09225 IPR013820 ATP phosphoribosyltransferase, catalytic domain BED35_09225 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BED35_09225 IPR018198 ATP phosphoribosyltransferase, conserved site BED35_09225 IPR020621 ATP phosphoribosyltransferase HisG, long form BED35_09230 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain BED35_09230 IPR036291 BED35_09230 BED35_09235 IPR001851 ABC transporter, permease BED35_09240 IPR003439 ABC transporter-like BED35_09240 IPR003593 AAA+ ATPase domain BED35_09240 IPR017871 ABC transporter, conserved site BED35_09240 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_09245 IPR001670 Alcohol dehydrogenase, iron-type BED35_09245 IPR016205 Glycerol dehydrogenase BED35_09245 IPR018211 Alcohol dehydrogenase, iron-type, conserved site BED35_09255 IPR002293 Amino acid/polyamine transporter I BED35_09260 IPR012337 Ribonuclease H-like domain BED35_09260 IPR013520 Exonuclease, RNase T/DNA polymerase III BED35_09260 IPR013620 Exonuclease C-terminal BED35_09260 IPR023607 Exodeoxyribonuclease I BED35_09260 IPR036397 BED35_09260 BED35_09260 IPR038649 BED35_09260 BED35_09265 IPR013120 Male sterility, NAD-binding BED35_09265 IPR036291 BED35_09265 BED35_09275 IPR007458 Protein of unknown function DUF496 BED35_09280 IPR001851 ABC transporter, permease BED35_09285 IPR001851 ABC transporter, permease BED35_09290 IPR003439 ABC transporter-like BED35_09290 IPR003593 AAA+ ATPase domain BED35_09290 IPR017871 ABC transporter, conserved site BED35_09290 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_09295 IPR025997 Periplasmic binding protein domain BED35_09295 IPR028082 Periplasmic binding protein-like I BED35_09300 IPR006204 GHMP kinase N-terminal domain BED35_09300 IPR012363 Propanediol utilisation/coumermycin biosynthesis, PduX-related BED35_09300 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BED35_09300 IPR020568 Ribosomal protein S5 domain 2-type fold BED35_09305 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site BED35_09305 IPR004839 Aminotransferase, class I/classII BED35_09305 IPR005860 L-threonine-O-3-phosphate decarboxylase BED35_09305 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BED35_09305 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 BED35_09305 IPR015424 Pyridoxal phosphate-dependent transferase BED35_09310 IPR000878 Tetrapyrrole methylase BED35_09310 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site BED35_09310 IPR006366 Uroporphyrin-III C-methyltransferase BED35_09310 IPR014776 Tetrapyrrole methylase, subdomain 2 BED35_09310 IPR014777 Tetrapyrrole methylase, subdomain 1 BED35_09310 IPR035996 BED35_09310 BED35_09315 IPR000890 Aliphatic acid kinase, short-chain BED35_09315 IPR004372 Acetate/Proprionate kinase BED35_09315 IPR023865 Aliphatic acid kinase, short-chain, conserved site BED35_09315 IPR024896 Propionate kinase PduW BED35_09320 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV BED35_09320 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_09325 IPR000249 Microcompartment protein, bacteria BED35_09325 IPR009307 Ethanolamine utilisation EutS BED35_09325 IPR037233 BED35_09325 BED35_09330 IPR000249 Microcompartment protein, bacteria BED35_09330 IPR011238 Polyhedral organelle shell protein PduT BED35_09330 IPR037233 BED35_09330 BED35_09335 IPR009051 Alpha-helical ferredoxin BED35_09335 IPR011538 NADH:ubiquinone oxidoreductase, 51kDa subunit BED35_09335 IPR017054 Propanediol utilization protein, PduS, predicted BED35_09335 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BED35_09335 IPR019554 Soluble ligand binding domain BED35_09335 IPR026902 RnfC Barrel sandwich hybrid domain BED35_09335 IPR037225 BED35_09335 BED35_09340 IPR001670 Alcohol dehydrogenase, iron-type BED35_09340 IPR018211 Alcohol dehydrogenase, iron-type, conserved site BED35_09345 IPR012408 Acetaldehyde/propionaldehyde dehydrogenase, EutE/PduP-related BED35_09345 IPR015590 Aldehyde dehydrogenase domain BED35_09345 IPR016161 Aldehyde/histidinol dehydrogenase BED35_09345 IPR016162 Aldehyde dehydrogenase, N-terminal BED35_09345 IPR016163 Aldehyde dehydrogenase, C-terminal BED35_09350 IPR005624 Domain of unknown function DUF336 BED35_09350 IPR009221 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, bifunctional PduO BED35_09350 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like BED35_09350 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type BED35_09350 IPR036451 BED35_09350 BED35_09350 IPR038084 BED35_09350 BED35_09355 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml BED35_09355 IPR036677 BED35_09355 BED35_09360 IPR030992 BED35_09360 BED35_09365 IPR008300 Propanediol utilisation protein BED35_09370 IPR000249 Microcompartment protein, bacteria BED35_09370 IPR037233 BED35_09370 BED35_09375 IPR000249 Microcompartment protein, bacteria BED35_09375 IPR020808 Bacterial microcompartments protein, conserved site BED35_09375 IPR037233 BED35_09375 BED35_09380 IPR003208 Diol/glycerol dehydratase/dehydratase reactivating factor BED35_09380 IPR009192 Diol/glycerol dehydratase reactivating factor, small subunit BED35_09380 IPR010254 B12-dependent dehydratases, beta subunit BED35_09385 IPR009191 Diol/glycerol dehydratase reactivating factor, large subunit BED35_09385 IPR028975 Diol dehydratase-reactivating factor, alpha subunit, swiveling domain BED35_09385 IPR030994 BED35_09385 BED35_09390 IPR003207 Propanediol/glycerol dehydratase, small subunit BED35_09390 IPR036091 BED35_09390 BED35_09395 IPR003208 Diol/glycerol dehydratase/dehydratase reactivating factor BED35_09395 IPR010254 B12-dependent dehydratases, beta subunit BED35_09395 IPR025541 Propanediol/glycerol dehydratase, medium subunit BED35_09400 IPR003206 Diol/glycerol dehydratase, large subunit BED35_09400 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic BED35_09400 IPR036999 BED35_09400 BED35_09405 IPR000249 Microcompartment protein, bacteria BED35_09405 IPR009193 Polyhedral organelle shell protein, EutL/PduB type BED35_09405 IPR030984 BED35_09405 BED35_09405 IPR037233 BED35_09405 BED35_09410 IPR000249 Microcompartment protein, bacteria BED35_09410 IPR020808 Bacterial microcompartments protein, conserved site BED35_09410 IPR037233 BED35_09410 BED35_09415 IPR000425 Major intrinsic protein BED35_09415 IPR022357 Major intrinsic protein, conserved site BED35_09415 IPR023271 Aquaporin-like BED35_09420 IPR009057 Homeodomain-like BED35_09420 IPR018060 DNA binding HTH domain, AraC-type BED35_09420 IPR018771 PocR domain BED35_09420 IPR020449 Transcription regulator HTH, AraC- type BED35_09425 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain BED35_09425 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA BED35_09425 IPR011698 CobB/CobQ-like glutamine amidotransferase BED35_09425 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_09425 IPR029062 Class I glutamine amidotransferase-like BED35_09435 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase BED35_09435 IPR036588 BED35_09435 BED35_09440 IPR002748 Cobalamin (vitamin B12) biosynthesis CbiD BED35_09440 IPR036074 BED35_09440 BED35_09445 IPR000878 Tetrapyrrole methylase BED35_09445 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase BED35_09445 IPR014777 Tetrapyrrole methylase, subdomain 1 BED35_09445 IPR035996 BED35_09445 BED35_09450 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit BED35_09450 IPR025714 Methyltransferase domain BED35_09450 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BED35_09455 IPR000878 Tetrapyrrole methylase BED35_09455 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site BED35_09455 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase BED35_09455 IPR014776 Tetrapyrrole methylase, subdomain 2 BED35_09455 IPR014777 Tetrapyrrole methylase, subdomain 1 BED35_09455 IPR035996 BED35_09455 BED35_09460 IPR002750 CobE/GbiG C-terminal domain BED35_09460 IPR021744 Cobalamin synthesis G, N-terminal BED35_09460 IPR021745 Cobalamin biosynthesis central region BED35_09460 IPR036518 BED35_09460 BED35_09460 IPR038029 BED35_09460 BED35_09465 IPR000878 Tetrapyrrole methylase BED35_09465 IPR006363 Cobalamin (vitamin B12) biosynthesis CobJ/CibH, precorrin-3B C17-methyltransferase, core BED35_09465 IPR014776 Tetrapyrrole methylase, subdomain 2 BED35_09465 IPR014777 Tetrapyrrole methylase, subdomain 1 BED35_09465 IPR035996 BED35_09465 BED35_09470 IPR003723 Precorrin-6x reductase BED35_09475 IPR010388 Anaerobic cobalt chelatase BED35_09480 IPR000878 Tetrapyrrole methylase BED35_09480 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site BED35_09480 IPR006364 Cobalamin (vitamin B12) biosynthesis CobI/CbiL, precorrin-2 C20-methyltransferase, core BED35_09480 IPR012382 Cobalamin (vitamin B12) biosynthesis CobI/CbiL, precorrin-2 C20-methyltransferase BED35_09480 IPR014776 Tetrapyrrole methylase, subdomain 2 BED35_09480 IPR014777 Tetrapyrrole methylase, subdomain 1 BED35_09480 IPR035996 BED35_09480 BED35_09485 IPR002751 Cobalamin (vitamin B12) biosynthesis CbiM family BED35_09485 IPR018024 Cobalamin (vitamin B12) biosynthesis protein CbiM BED35_09490 IPR003705 Cobalt transport protein CbiN BED35_09495 IPR003339 ABC/ECF transporter, transmembrane component BED35_09495 IPR012809 ECF transporter, transmembrane component CbiQ/NikQ BED35_09500 IPR003439 ABC transporter-like BED35_09500 IPR003593 AAA+ ATPase domain BED35_09500 IPR005876 Cobalt transport protein ATP-binding subunit BED35_09500 IPR017871 ABC transporter, conserved site BED35_09500 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_09505 IPR004459 Cobyric acid synthase CobQ BED35_09505 IPR011698 CobB/CobQ-like glutamine amidotransferase BED35_09505 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_09505 IPR029062 Class I glutamine amidotransferase-like BED35_09515 IPR003805 Cobalamin (vitamin B12) biosynthesis CobS, cobalamin-5-phosphate synthase BED35_09520 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site BED35_09520 IPR013078 Histidine phosphatase superfamily, clade-1 BED35_09520 IPR017578 Alpha-ribazole phosphatase, CobC BED35_09520 IPR029033 Histidine phosphatase superfamily BED35_09525 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like BED35_09525 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic BED35_09525 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal BED35_09525 IPR036087 BED35_09525 BED35_09540 IPR000792 Transcription regulator LuxR, C-terminal BED35_09540 IPR016032 Signal transduction response regulator, C-terminal effector BED35_09540 IPR036388 BED35_09540 BED35_09545 IPR014894 Protein DcrB BED35_09545 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich BED35_09550 IPR006664 Outer membrane protein, bacterial BED35_09550 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal BED35_09550 IPR036737 BED35_09550 BED35_09565 IPR009612 ImcF-related BED35_09565 IPR010623 Domain of unknown function DUF1215 BED35_09565 IPR017731 Type VI secretion system, IcmF BED35_09565 IPR025743 ImcF-related, N-terminal domain BED35_09565 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_09570 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein BED35_09570 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset BED35_09570 IPR037026 BED35_09570 BED35_09575 IPR008727 PAAR motif BED35_09585 IPR009211 Predicted virulence protein, SciE type BED35_09585 IPR011990 Tetratricopeptide-like helical domain BED35_09590 IPR007048 GpW/Gp25/anti-adapter protein IraD BED35_09595 IPR001518 Argininosuccinate synthase BED35_09595 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED35_09595 IPR018223 Argininosuccinate synthase, conserved site BED35_09595 IPR023437 Argininosuccinate synthase, type 2 subfamily BED35_09595 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail BED35_09595 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body BED35_09600 IPR002528 Multi antimicrobial extrusion protein BED35_09610 IPR011060 Ribulose-phosphate binding barrel BED35_09610 IPR013785 Aldolase-type TIM barrel BED35_09615 IPR000150 Cof protein BED35_09615 IPR006379 HAD-superfamily hydrolase, subfamily IIB BED35_09615 IPR023214 HAD-like domain BED35_09615 IPR036412 BED35_09615 BED35_09620 IPR001034 HTH DeoR N-terminal domain BED35_09620 IPR014036 DeoR C-terminal sensor domain BED35_09620 IPR018356 Transcription regulator, HTH DeoR-type, conserved site BED35_09620 IPR036388 BED35_09620 BED35_09620 IPR036390 BED35_09620 BED35_09620 IPR037171 BED35_09620 BED35_09625 IPR001466 Beta-lactamase-related BED35_09625 IPR012338 Beta-lactamase/transpeptidase-like BED35_09630 IPR001789 Signal transduction response regulator, receiver domain BED35_09630 IPR002545 CheW-like protein BED35_09630 IPR011006 CheY-like superfamily BED35_09630 IPR024181 Chemotaxis response regulator CheV BED35_09630 IPR036061 BED35_09630 BED35_09635 IPR001647 DNA-binding HTH domain, TetR-type BED35_09635 IPR009057 Homeodomain-like BED35_09635 IPR023772 DNA-binding HTH domain, TetR-type, conserved site BED35_09635 IPR036271 BED35_09635 BED35_09640 IPR000524 Transcription regulator HTH, GntR BED35_09640 IPR004839 Aminotransferase, class I/classII BED35_09640 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BED35_09640 IPR015424 Pyridoxal phosphate-dependent transferase BED35_09640 IPR036388 BED35_09640 BED35_09640 IPR036390 BED35_09640 BED35_09645 IPR000182 GNAT domain BED35_09645 IPR016181 Acyl-CoA N-acyltransferase BED35_09650 IPR003710 Ketopantoate reductase ApbA/PanE BED35_09650 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like BED35_09650 IPR013328 Dehydrogenase, multihelical BED35_09650 IPR013332 Ketopantoate reductase, N-terminal domain BED35_09650 IPR013752 Ketopantoate reductase, C-terminal domain BED35_09650 IPR036291 BED35_09650 BED35_09660 IPR003439 ABC transporter-like BED35_09660 IPR003593 AAA+ ATPase domain BED35_09660 IPR008995 Molybdate/tungstate binding, C-terminal BED35_09660 IPR013611 Transport-associated OB, type 2 BED35_09660 IPR017871 ABC transporter, conserved site BED35_09660 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_09665 IPR000515 MetI-like domain BED35_09665 IPR035906 BED35_09665 BED35_09670 IPR026045 Ferric binding protein BED35_09675 IPR000849 Sugar phosphate transporter BED35_09675 IPR011701 Major facilitator superfamily BED35_09675 IPR036259 BED35_09675 BED35_09680 IPR003594 Histidine kinase-like ATPase, C-terminal domain BED35_09680 IPR007895 MASE1 BED35_09680 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain BED35_09680 IPR036890 BED35_09680 BED35_09685 IPR000792 Transcription regulator LuxR, C-terminal BED35_09685 IPR001789 Signal transduction response regulator, receiver domain BED35_09685 IPR011006 CheY-like superfamily BED35_09685 IPR016032 Signal transduction response regulator, C-terminal effector BED35_09690 IPR001789 Signal transduction response regulator, receiver domain BED35_09690 IPR011006 CheY-like superfamily BED35_09690 IPR024187 Signal transduction response regulator, citrate/malate metabolism BED35_09690 IPR028141 Transcriptional regulator BED35_09695 IPR003594 Histidine kinase-like ATPase, C-terminal domain BED35_09695 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BED35_09695 IPR036890 BED35_09695 BED35_09710 IPR004821 Cytidyltransferase-like domain BED35_09710 IPR005216 Citrate lyase ligase BED35_09710 IPR013166 Citrate lyase ligase, C-terminal BED35_09710 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED35_09710 IPR016181 Acyl-CoA N-acyltransferase BED35_09715 IPR006495 Citrate lyase acyl carrier protein CitD BED35_09715 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein BED35_09720 IPR005000 HpcH/HpaI aldolase/citrate lyase domain BED35_09720 IPR011206 Citrate lyase beta subunit-like BED35_09720 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain BED35_09725 IPR006472 Citrate lyase, alpha subunit BED35_09725 IPR037171 BED35_09725 BED35_09730 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase BED35_09735 IPR002736 Triphosphoribosyl-dephospho-CoA protein BED35_09735 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG BED35_09740 IPR001898 Sodium/sulphate symporter BED35_09740 IPR030676 BED35_09740 BED35_09750 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component BED35_09755 IPR004682 TRAP dicarboxylate transporter BED35_09755 IPR018389 Bacterial extracellular solute-binding protein, family 7 BED35_09755 IPR038404 BED35_09755 BED35_09765 IPR003542 Enterobactin synthetase-like, component D BED35_09765 IPR008278 4'-phosphopantetheinyl transferase superfamily BED35_09765 IPR037143 BED35_09765 BED35_09770 IPR007803 Arginine/Asparagine/Proline hydroxylase BED35_09770 IPR027443 Isopenicillin N synthase-like BED35_09775 IPR003663 Sugar/inositol transporter BED35_09775 IPR005828 General substrate transporter BED35_09775 IPR005829 Sugar transporter, conserved site BED35_09775 IPR036259 BED35_09775 BED35_09780 IPR002178 PTS EIIA type-2 domain BED35_09780 IPR016152 Phosphotransferase/anion transporter BED35_09785 IPR018636 Protein of unknown function DUF2058 BED35_09790 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F BED35_09790 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site BED35_09790 IPR020103 Pseudouridine synthase, catalytic domain BED35_09805 IPR001829 Pili assembly chaperone, bacterial BED35_09805 IPR008962 PapD-like BED35_09805 IPR013783 Immunoglobulin-like fold BED35_09805 IPR016147 PapD, N-terminal, bacterial BED35_09805 IPR016148 Pili assembly chaperone, C-terminal domain BED35_09805 IPR018046 Pili assembly chaperone, conserved site BED35_09805 IPR036316 BED35_09805 BED35_09810 IPR000259 Fimbrial-type adhesion domain BED35_09810 IPR008966 Adhesion domain BED35_09810 IPR011228 Uncharacterised conserved protein UCP029766 BED35_09815 IPR000015 Outer membrane usher protein BED35_09815 IPR025885 PapC, N-terminal domain BED35_09815 IPR025949 PapC-like, C-terminal domain BED35_09815 IPR037224 BED35_09815 BED35_09820 IPR001829 Pili assembly chaperone, bacterial BED35_09820 IPR008962 PapD-like BED35_09820 IPR013783 Immunoglobulin-like fold BED35_09820 IPR016147 PapD, N-terminal, bacterial BED35_09820 IPR016148 Pili assembly chaperone, C-terminal domain BED35_09820 IPR036316 BED35_09820 BED35_09825 IPR000259 Fimbrial-type adhesion domain BED35_09825 IPR008966 Adhesion domain BED35_09825 IPR036937 BED35_09825 BED35_09835 IPR000792 Transcription regulator LuxR, C-terminal BED35_09835 IPR001789 Signal transduction response regulator, receiver domain BED35_09835 IPR011006 CheY-like superfamily BED35_09835 IPR016032 Signal transduction response regulator, C-terminal effector BED35_09845 IPR010384 MtfA family BED35_09845 IPR024079 Metallopeptidase, catalytic domain BED35_09850 IPR028082 Periplasmic binding protein-like I BED35_09855 IPR018484 Carbohydrate kinase, FGGY, N-terminal BED35_09855 IPR018485 Carbohydrate kinase, FGGY, C-terminal BED35_09860 IPR010546 Protein of unknown function DUF1120 BED35_09865 IPR010546 Protein of unknown function DUF1120 BED35_09880 IPR008962 PapD-like BED35_09880 IPR013783 Immunoglobulin-like fold BED35_09880 IPR016147 PapD, N-terminal, bacterial BED35_09880 IPR036316 BED35_09880 BED35_09885 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED35_09885 IPR003346 Transposase, IS116/IS110/IS902 BED35_09890 IPR005835 Nucleotidyl transferase BED35_09890 IPR005836 ADP-glucose pyrophosphorylase, conserved site BED35_09890 IPR011004 Trimeric LpxA-like BED35_09890 IPR011831 Glucose-1-phosphate adenylyltransferase BED35_09890 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial BED35_09890 IPR029044 Nucleotide-diphospho-sugar transferases BED35_09900 IPR017704 Putative selenium-binding protein YdfZ BED35_09910 IPR000485 AsnC-type HTH domain BED35_09910 IPR011008 Dimeric alpha-beta barrel BED35_09910 IPR019887 Transcription regulator AsnC-type, C-terminal BED35_09910 IPR019888 Transcription regulator AsnC-type BED35_09910 IPR036388 BED35_09910 BED35_09910 IPR036390 BED35_09910 BED35_09915 IPR019713 Inner membrane protein YlaC BED35_09920 IPR011032 GroES (chaperonin 10)-like BED35_09920 IPR013149 Alcohol dehydrogenase, C-terminal BED35_09920 IPR013154 Alcohol dehydrogenase GroES-like BED35_09920 IPR014189 Quinone oxidoreductase PIG3 BED35_09920 IPR020843 Polyketide synthase, enoylreductase BED35_09920 IPR036291 BED35_09920 BED35_09925 IPR001207 Transposase, mutator type BED35_09930 IPR004199 Beta galactosidase small chain/ domain 5 BED35_09930 IPR006101 Glycoside hydrolase, family 2 BED35_09930 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich BED35_09930 IPR006103 Glycoside hydrolase, family 2, TIM barrel BED35_09930 IPR006104 Glycosyl hydrolases family 2, sugar binding domain BED35_09930 IPR008979 Galactose-binding domain-like BED35_09930 IPR011013 Galactose mutarotase-like domain BED35_09930 IPR013783 Immunoglobulin-like fold BED35_09930 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup BED35_09930 IPR017853 Glycoside hydrolase, superfamily BED35_09930 IPR023230 Glycoside hydrolase, family 2, conserved site BED35_09930 IPR023232 Glycoside hydrolase, family 2, active site BED35_09930 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase BED35_09930 IPR032312 BED35_09930 BED35_09930 IPR036156 BED35_09930 BED35_09935 IPR000843 Transcription regulator HTH, LacI BED35_09935 IPR010982 Lambda repressor-like, DNA-binding domain BED35_09935 IPR028082 Periplasmic binding protein-like I BED35_09940 IPR002059 Cold-shock protein, DNA-binding BED35_09940 IPR011129 Cold shock protein BED35_09940 IPR012156 Cold shock, CspA BED35_09940 IPR012340 Nucleic acid-binding, OB-fold BED35_09940 IPR019844 Cold-shock conserved site BED35_09945 IPR019717 Dextransucrase DSRB BED35_09950 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding BED35_09950 IPR003660 HAMP linker domain BED35_09950 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BED35_09950 IPR004090 Chemotaxis methyl-accepting receptor BED35_09950 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site BED35_09950 IPR035440 BED35_09950 BED35_09965 IPR003416 MgtC/SapB/SrpB transporter BED35_09970 IPR001757 Cation-transporting P-type ATPase BED35_09970 IPR004014 Cation-transporting P-type ATPase, N-terminal BED35_09970 IPR006068 Cation-transporting P-type ATPase, C-terminal BED35_09970 IPR006415 Magnesium-transporting P-type ATPase, subfamily IIIB BED35_09970 IPR008250 P-type ATPase, A domain BED35_09970 IPR018303 P-type ATPase, phosphorylation site BED35_09970 IPR023214 HAD-like domain BED35_09970 IPR023298 P-type ATPase, transmembrane domain BED35_09970 IPR023299 P-type ATPase, cytoplasmic domain N BED35_09970 IPR036412 BED35_09970 BED35_09975 IPR011032 GroES (chaperonin 10)-like BED35_09975 IPR013149 Alcohol dehydrogenase, C-terminal BED35_09975 IPR020843 Polyketide synthase, enoylreductase BED35_09975 IPR036291 BED35_09975 BED35_09980 IPR006015 Universal stress protein A BED35_09980 IPR006016 UspA BED35_09980 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED35_09985 IPR023559 Flagellar transcriptional activator FlhD BED35_09985 IPR036194 BED35_09985 BED35_09990 IPR007944 Flagellar transcriptional activator FlhC BED35_09995 IPR000540 Flagellar motor protein MotA, conserved site BED35_09995 IPR002898 MotA/TolQ/ExbB proton channel BED35_09995 IPR022522 Flagellar motor stator, MotA BED35_10000 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal BED35_10000 IPR025713 Motility protein B, N-terminal domain BED35_10000 IPR036737 BED35_10000 BED35_10005 IPR002545 CheW-like protein BED35_10005 IPR003594 Histidine kinase-like ATPase, C-terminal domain BED35_10005 IPR004105 Histidine kinase CheA-like, homodimeric domain BED35_10005 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BED35_10005 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain BED35_10005 IPR015162 CheY binding BED35_10005 IPR035891 BED35_10005 BED35_10005 IPR036061 BED35_10005 BED35_10005 IPR036097 BED35_10005 BED35_10005 IPR036641 BED35_10005 BED35_10005 IPR036890 BED35_10005 BED35_10005 IPR037006 BED35_10005 BED35_10010 IPR002545 CheW-like protein BED35_10010 IPR036061 BED35_10010 BED35_10015 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding BED35_10015 IPR003660 HAMP linker domain BED35_10015 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BED35_10015 IPR004090 Chemotaxis methyl-accepting receptor BED35_10015 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site BED35_10015 IPR035440 BED35_10015 BED35_10020 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding BED35_10020 IPR003660 HAMP linker domain BED35_10020 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BED35_10020 IPR004090 Chemotaxis methyl-accepting receptor BED35_10020 IPR035440 BED35_10020 BED35_10025 IPR000780 MCP methyltransferase, CheR-type BED35_10025 IPR022641 MCP methyltransferase, CheR-type, all-alpha domain, N-terminal BED35_10025 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal BED35_10025 IPR026024 Chemotaxis protein methyltransferase CheR BED35_10025 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BED35_10025 IPR036804 BED35_10025 BED35_10030 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase BED35_10030 IPR001789 Signal transduction response regulator, receiver domain BED35_10030 IPR008248 Signal transduction response regulator, chemotaxis, CheB BED35_10030 IPR011006 CheY-like superfamily BED35_10030 IPR035909 BED35_10030 BED35_10035 IPR001789 Signal transduction response regulator, receiver domain BED35_10035 IPR011006 CheY-like superfamily BED35_10040 IPR007439 Chemotaxis phosphatase, CheZ BED35_10045 IPR000209 Peptidase S8/S53 domain BED35_10045 IPR015500 Peptidase S8, subtilisin-related BED35_10045 IPR023827 Peptidase S8, subtilisin, Asp-active site BED35_10045 IPR023828 Peptidase S8, subtilisin, Ser-active site BED35_10045 IPR036852 BED35_10045 BED35_10050 IPR006135 Type III secretion system substrate exporter BED35_10050 IPR006136 Type III exporter system, flagellar biosynthetic protein FlhB BED35_10050 IPR029025 Type III secretion system substrate exporter, C-terminal BED35_10055 IPR001712 Type III secretion system FHIPEP BED35_10055 IPR006301 Flagellar biosynthesis protein FlhA BED35_10055 IPR025505 FHIPEP conserved site BED35_10060 IPR009420 Flagellar FlhE BED35_10070 IPR007809 FlgN-like domain BED35_10070 IPR036679 BED35_10070 BED35_10075 IPR007412 Anti-sigma-28 factor, FlgM BED35_10075 IPR031316 BED35_10075 BED35_10075 IPR035890 BED35_10075 BED35_10080 IPR013974 SAF domain BED35_10080 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal BED35_10085 IPR001444 Flagellar basal body rod protein, N-terminal BED35_10085 IPR006300 Flagellar basal-body rod protein FlgB BED35_10085 IPR019776 Flagellar basal body rod protein, conserved site BED35_10090 IPR001444 Flagellar basal body rod protein, N-terminal BED35_10090 IPR006299 Flagellar basal-body rod protein FlgC BED35_10090 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BED35_10090 IPR019776 Flagellar basal body rod protein, conserved site BED35_10095 IPR005648 Flagellar hook capping protein BED35_10095 IPR025963 FlgD Tudor-like domain BED35_10095 IPR025965 FlgD Ig-like domain BED35_10100 IPR001444 Flagellar basal body rod protein, N-terminal BED35_10100 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BED35_10100 IPR011491 Flagellar basal body FlaE BED35_10100 IPR019776 Flagellar basal body rod protein, conserved site BED35_10100 IPR020013 Fagellar hook-basal body protein, FlgE/F/G BED35_10100 IPR037058 BED35_10100 BED35_10100 IPR037925 BED35_10100 BED35_10105 IPR001444 Flagellar basal body rod protein, N-terminal BED35_10105 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BED35_10105 IPR020013 Fagellar hook-basal body protein, FlgE/F/G BED35_10105 IPR037925 BED35_10105 BED35_10110 IPR001444 Flagellar basal body rod protein, N-terminal BED35_10110 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BED35_10110 IPR012834 Flagellar basal-body rod FlgG BED35_10110 IPR019776 Flagellar basal body rod protein, conserved site BED35_10110 IPR020013 Fagellar hook-basal body protein, FlgE/F/G BED35_10110 IPR037925 BED35_10110 BED35_10115 IPR000527 Flagellar L-ring protein BED35_10120 IPR001782 Flagellar P-ring protein BED35_10125 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain BED35_10125 IPR013377 Flagellar rod assembly protein/muramidase FlgJ BED35_10125 IPR019301 Flagellar protein FlgJ, N-terminal BED35_10130 IPR001444 Flagellar basal body rod protein, N-terminal BED35_10130 IPR002371 Flagellar hook-associated protein, FlgK BED35_10130 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BED35_10135 IPR001029 Flagellin, D0/D1 domain BED35_10135 IPR013384 Flagellar hook-associated protein 3 BED35_10140 IPR002010 Type III secretion system inner membrane R protein BED35_10140 IPR006303 Flagellar biosynthesis protein FliR BED35_10145 IPR002191 Bacterial export protein family 3 BED35_10145 IPR006305 Flagellar biosynthesis protein FliQ BED35_10150 IPR005837 Flagellar transport protein FliP BED35_10150 IPR005838 Type III secretion system inner membrane P protein BED35_10155 IPR022781 Flagellar biosynthesis protein, FliO BED35_10160 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb BED35_10160 IPR001543 Surface presentation of antigen (SpoA) BED35_10160 IPR012826 Flagellar motor switch FliN BED35_10160 IPR031576 BED35_10160 BED35_10160 IPR036429 BED35_10160 BED35_10165 IPR001543 Surface presentation of antigen (SpoA) BED35_10165 IPR001689 Flagellar motor switch protein FliM BED35_10165 IPR028976 CheC-like domain BED35_10165 IPR036429 BED35_10165 BED35_10170 IPR005503 Flagellar basal body-associated protein FliL BED35_10175 IPR001635 Flagellar hook-length control protein FliK BED35_10175 IPR021136 Flagellar hook-length control protein-like, C-terminal BED35_10175 IPR038610 BED35_10175 BED35_10180 IPR012823 Flagellar export FliJ BED35_10180 IPR018006 Flagellar FliJ, proteobacteria BED35_10185 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain BED35_10185 IPR003593 AAA+ ATPase domain BED35_10185 IPR005714 ATPase, type III secretion system, FliI/YscN BED35_10185 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site BED35_10185 IPR020005 Flagellar export ATPase FliI, clade 1 BED35_10185 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_10190 IPR000563 Flagellar assembly protein FliH BED35_10190 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE BED35_10195 IPR000090 Flagellar motor switch protein FliG BED35_10195 IPR011002 Flagellar motor switch protein FliG, alpha-helical BED35_10195 IPR023087 BED35_10195 BED35_10195 IPR028263 Flagellar motor switch protein FliG, N-terminal domain BED35_10195 IPR032779 BED35_10195 BED35_10200 IPR000067 Flagellar M-ring protein FliF BED35_10200 IPR006182 Secretory protein YscJ/FliF BED35_10200 IPR013556 Flagellar M-ring C-terminal BED35_10205 IPR001624 Flagellar hook-basal body complex protein FliE BED35_10230 IPR003265 HhH-GPD domain BED35_10230 IPR011257 DNA glycosylase BED35_10235 IPR003607 HD/PDEase domain BED35_10235 IPR029016 GAF domain-like BED35_10240 IPR009057 Homeodomain-like BED35_10240 IPR018060 DNA binding HTH domain, AraC-type BED35_10240 IPR020449 Transcription regulator HTH, AraC- type BED35_10245 IPR008622 Flagellar protein FliT BED35_10250 IPR003713 Flagellar protein FliS BED35_10250 IPR036584 BED35_10250 BED35_10255 IPR003481 Flagellar hook-associated protein 2, N-terminal BED35_10255 IPR010809 Flagellar hook-associated 2, C-terminal BED35_10255 IPR010810 Flagellin hook, IN motif BED35_10260 IPR001029 Flagellin, D0/D1 domain BED35_10260 IPR001492 Flagellin BED35_10265 IPR001029 Flagellin, D0/D1 domain BED35_10265 IPR001492 Flagellin BED35_10275 IPR000943 RNA polymerase sigma-70 BED35_10275 IPR007624 RNA polymerase sigma-70 region 3 BED35_10275 IPR007627 RNA polymerase sigma-70 region 2 BED35_10275 IPR007630 RNA polymerase sigma-70 region 4 BED35_10275 IPR012845 RNA polymerase sigma factor, FliA/WhiG BED35_10275 IPR013324 RNA polymerase sigma factor, region 3/4 BED35_10275 IPR013325 RNA polymerase sigma factor, region 2 BED35_10275 IPR014284 RNA polymerase sigma-70 like domain BED35_10275 IPR028617 RNA polymerase sigma factor FliA BED35_10280 IPR004107 Integrase, SAM-like, N-terminal BED35_10280 IPR022523 Flagellar regulator, FliZ BED35_10285 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme BED35_10285 IPR005966 D-cysteine desulfhydrase BED35_10285 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase BED35_10285 IPR036052 BED35_10285 BED35_10290 IPR001320 Ionotropic glutamate receptor BED35_10290 IPR001638 Extracellular solute-binding protein, family 3 BED35_10290 IPR018313 Extracellular solute-binding protein, family 3, conserved site BED35_10300 IPR003439 ABC transporter-like BED35_10300 IPR003593 AAA+ ATPase domain BED35_10300 IPR017871 ABC transporter, conserved site BED35_10300 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_10300 IPR030679 BED35_10300 BED35_10305 IPR036388 BED35_10305 BED35_10305 IPR036390 BED35_10305 BED35_10315 IPR002872 Proline dehydrogenase domain BED35_10315 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 BED35_10315 IPR010985 Ribbon-helix-helix BED35_10315 IPR013321 Arc-type ribbon-helix-helix BED35_10315 IPR015590 Aldehyde dehydrogenase domain BED35_10315 IPR016160 Aldehyde dehydrogenase, cysteine active site BED35_10315 IPR016161 Aldehyde/histidinol dehydrogenase BED35_10315 IPR016162 Aldehyde dehydrogenase, N-terminal BED35_10315 IPR016163 Aldehyde dehydrogenase, C-terminal BED35_10315 IPR024082 Proline dehydrogenase PutA, domain II BED35_10315 IPR024089 Proline dehydrogenase PutA, domain I/II BED35_10315 IPR024090 Proline dehydrogenase PutA, domain I BED35_10315 IPR025703 Bifunctional protein PutA BED35_10315 IPR029041 FAD-linked oxidoreductase-like BED35_10315 IPR029510 Aldehyde dehydrogenase, glutamic acid active site BED35_10320 IPR001734 Sodium/solute symporter BED35_10320 IPR011851 Sodium/proline symporter BED35_10320 IPR018212 Sodium/solute symporter, conserved site BED35_10320 IPR038377 BED35_10320 BED35_10340 IPR004923 Iron permease FTR1/Fip1/EfeU BED35_10345 IPR008972 Cupredoxin BED35_10345 IPR018976 BED35_10345 BED35_10345 IPR028096 EfeO-type cupredoxin-like domain BED35_10345 IPR038352 BED35_10345 BED35_10350 IPR006313 Deferrochelatase/peroxidase EfeB BED35_10350 IPR006314 Dyp-type peroxidase BED35_10350 IPR011008 Dimeric alpha-beta barrel BED35_10355 IPR005025 NADPH-dependent FMN reductase-like BED35_10355 IPR010089 Flavoprotein WrbA BED35_10355 IPR029039 Flavoprotein-like BED35_10355 IPR037513 BED35_10355 BED35_10360 IPR001387 Cro/C1-type helix-turn-helix domain BED35_10360 IPR010982 Lambda repressor-like, DNA-binding domain BED35_10360 IPR025698 2TM domain BED35_10365 IPR006652 Kelch repeat type 1 BED35_10365 IPR015915 Kelch-type beta propeller BED35_10365 IPR019936 Mutatrotase, YjhT-like BED35_10370 IPR009057 Homeodomain-like BED35_10380 IPR002563 Flavin reductase-like, FMN-binding BED35_10380 IPR012349 FMN-binding split barrel BED35_10380 IPR019917 FMN reductase (NADH) RutF BED35_10385 IPR000415 Nitroreductase-like BED35_10385 IPR023936 NADH dehydrogenase/NAD(P)H nitroreductase, putative, RutE BED35_10385 IPR029479 Nitroreductase BED35_10390 IPR000073 Alpha/beta hydrolase fold-1 BED35_10390 IPR019913 Pyrimidine utilisation protein RutD BED35_10390 IPR029058 Alpha/Beta hydrolase fold BED35_10400 IPR000868 Isochorismatase-like BED35_10400 IPR019916 Isochorismatase, RutB BED35_10400 IPR036380 BED35_10400 BED35_10410 IPR001647 DNA-binding HTH domain, TetR-type BED35_10410 IPR009057 Homeodomain-like BED35_10410 IPR013573 Transcription regulator YcdC, C-terminal BED35_10410 IPR036271 BED35_10410 BED35_10415 IPR002293 Amino acid/polyamine transporter I BED35_10415 IPR004840 Amino acid permease, conserved site BED35_10415 IPR004841 Amino acid permease/ SLC12A domain BED35_10425 IPR002104 Integrase, catalytic BED35_10425 IPR011010 DNA breaking-rejoining enzyme, catalytic core BED35_10425 IPR013762 Integrase-like, catalytic core BED35_10430 IPR002514 Transposase IS3/IS911family BED35_10430 IPR009057 Homeodomain-like BED35_10435 IPR001584 Integrase, catalytic core BED35_10435 IPR012337 Ribonuclease H-like domain BED35_10450 IPR011051 RmlC-like cupin domain BED35_10455 IPR006047 Glycosyl hydrolase, family 13, catalytic domain BED35_10455 IPR013776 Alpha-amylase, thermostable BED35_10455 IPR013780 Glycosyl hydrolase, family 13, all-beta BED35_10455 IPR017853 Glycoside hydrolase, superfamily BED35_10465 IPR000462 CDP-alcohol phosphatidyltransferase BED35_10465 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase BED35_10465 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial BED35_10485 IPR007684 Zinc finger, Ogr/Delta-type BED35_10520 IPR006522 Phage virion morphogensis protein BED35_10525 IPR009678 Bacteriophage tail completion protein R BED35_10530 IPR020000 Bacteriophage P2, LysB BED35_10535 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain BED35_10535 IPR039561 BED35_10535 BED35_10555 IPR008490 Transposase InsH, N-terminal BED35_10555 IPR025668 Transposase DDE domain BED35_10565 IPR000847 Transcription regulator HTH, LysR BED35_10565 IPR005119 LysR, substrate-binding BED35_10565 IPR036388 BED35_10565 BED35_10565 IPR036390 BED35_10565 BED35_10570 IPR001387 Cro/C1-type helix-turn-helix domain BED35_10570 IPR010982 Lambda repressor-like, DNA-binding domain BED35_10575 IPR001451 Bacterial transferase hexapeptide repeat BED35_10575 IPR011004 Trimeric LpxA-like BED35_10585 IPR010534 Bacteriophage 933W, GpQ BED35_10590 IPR019689 Pseudomonas phage PaP3, Orf56 BED35_10595 IPR032118 BED35_10595 BED35_10600 IPR002196 Glycoside hydrolase, family 24 BED35_10600 IPR023346 Lysozyme-like domain BED35_10605 IPR000073 Alpha/beta hydrolase fold-1 BED35_10605 IPR029058 Alpha/Beta hydrolase fold BED35_10610 IPR007486 Protein of unknown function DUF533 BED35_10610 IPR029024 TerB-like BED35_10615 IPR000847 Transcription regulator HTH, LysR BED35_10615 IPR005119 LysR, substrate-binding BED35_10615 IPR036388 BED35_10615 BED35_10615 IPR036390 BED35_10615 BED35_10620 IPR001466 Beta-lactamase-related BED35_10620 IPR001586 Beta-lactamase, class-C active site BED35_10620 IPR012338 Beta-lactamase/transpeptidase-like BED35_10625 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 BED35_10625 IPR006073 GTP binding domain BED35_10625 IPR012675 Beta-grasp domain BED35_10625 IPR012676 TGS-like BED35_10625 IPR013029 Domain of unknown function DUF933 BED35_10625 IPR023192 TGS-like domain BED35_10625 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_10635 IPR001328 Peptidyl-tRNA hydrolase BED35_10635 IPR018171 Peptidyl-tRNA hydrolase, conserved site BED35_10635 IPR036416 BED35_10635 BED35_10640 IPR019698 Protein of unknown function DUF2583 BED35_10650 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site BED35_10650 IPR005946 Ribose-phosphate diphosphokinase BED35_10650 IPR029057 Phosphoribosyltransferase-like BED35_10650 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain BED35_10650 IPR037515 BED35_10650 BED35_10655 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase BED35_10655 IPR006204 GHMP kinase N-terminal domain BED35_10655 IPR013750 GHMP kinase, C-terminal domain BED35_10655 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BED35_10655 IPR020568 Ribosomal protein S5 domain 2-type fold BED35_10655 IPR036554 BED35_10655 BED35_10660 IPR004565 Outer membrane lipoprotein LolB BED35_10660 IPR029046 Lipoprotein localisation LolA/LolB/LppX BED35_10665 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase BED35_10665 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase BED35_10665 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal BED35_10665 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain BED35_10665 IPR018214 Glutamyl-tRNA reductase, conserved site BED35_10665 IPR036291 BED35_10665 BED35_10665 IPR036343 BED35_10665 BED35_10665 IPR036453 BED35_10665 BED35_10670 IPR000352 Peptide chain release factor class I/class II BED35_10670 IPR004373 Peptide chain release factor 1 BED35_10670 IPR005139 Peptide chain release factor BED35_10675 IPR002052 DNA methylase, N-6 adenine-specific, conserved site BED35_10675 IPR004556 Modification methylase HemK BED35_10675 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific BED35_10675 IPR025714 Methyltransferase domain BED35_10675 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BED35_10680 IPR007360 Invasion gene expression up-regulator, SirB BED35_10685 IPR011990 Tetratricopeptide-like helical domain BED35_10685 IPR032698 BED35_10685 BED35_10690 IPR006218 DAHP synthetase I/KDSA BED35_10690 IPR006269 3-deoxy-8-phosphooctulonate synthase BED35_10690 IPR013785 Aldolase-type TIM barrel BED35_10695 IPR001902 Sulphate anion transporter BED35_10695 IPR002645 STAS domain BED35_10695 IPR011547 Sulphate transporter BED35_10695 IPR018045 Sulphate anion transporter, conserved site BED35_10695 IPR036513 BED35_10695 BED35_10700 IPR000160 GGDEF domain BED35_10700 IPR029787 Nucleotide cyclase BED35_10725 IPR003141 Polymerase/histidinol phosphatase, N-terminal BED35_10725 IPR004013 PHP, C-terminal BED35_10725 IPR016195 Polymerase/histidinol phosphatase-like BED35_10725 IPR023710 Probable phosphatase YcdX BED35_10730 IPR020945 DMSO/Nitrate reductase chaperone BED35_10730 IPR026269 Tat proofreading chaperone DmsD-type BED35_10730 IPR036411 BED35_10730 BED35_10735 IPR010835 Protein of unknown function DUF1439 BED35_10740 IPR011701 Major facilitator superfamily BED35_10740 IPR022855 Multidrug resistance protein MdtH BED35_10740 IPR036259 BED35_10740 BED35_10750 IPR025320 Protein of unknown function DUF4225 BED35_10755 IPR000182 GNAT domain BED35_10755 IPR016181 Acyl-CoA N-acyltransferase BED35_10760 IPR007432 Protein of unknown function DUF480 BED35_10760 IPR036388 BED35_10760 BED35_10760 IPR036390 BED35_10760 BED35_10765 IPR000683 Oxidoreductase, N-terminal BED35_10765 IPR036291 BED35_10765 BED35_10770 IPR004268 Flagellin assembly, membrane protein MviN BED35_10775 IPR004713 Calcium/proton exchanger BED35_10775 IPR004837 Sodium/calcium exchanger membrane region BED35_10780 IPR007037 Siderophore-interacting protein BED35_10780 IPR013113 FAD-binding 9, siderophore-interacting BED35_10780 IPR017938 Riboflavin synthase-like beta-barrel BED35_10780 IPR039261 BED35_10780 BED35_10785 IPR011701 Major facilitator superfamily BED35_10785 IPR036259 BED35_10785 BED35_10790 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED35_10790 IPR003346 Transposase, IS116/IS110/IS902 BED35_10800 IPR003594 Histidine kinase-like ATPase, C-terminal domain BED35_10800 IPR003660 HAMP linker domain BED35_10800 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain BED35_10800 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing BED35_10800 IPR029095 NarX-like, N-terminal BED35_10800 IPR036890 BED35_10800 BED35_10805 IPR003317 Cytochrome d ubiquinol oxidase, subunit II BED35_10810 IPR002585 Cytochrome d ubiquinol oxidase, subunit I BED35_10815 IPR000524 Transcription regulator HTH, GntR BED35_10815 IPR004839 Aminotransferase, class I/classII BED35_10815 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BED35_10815 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 BED35_10815 IPR015424 Pyridoxal phosphate-dependent transferase BED35_10815 IPR036388 BED35_10815 BED35_10815 IPR036390 BED35_10815 BED35_10820 IPR004636 Acetylornithine/Succinylornithine transaminase family BED35_10820 IPR005814 Aminotransferase class-III BED35_10820 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BED35_10820 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 BED35_10820 IPR015424 Pyridoxal phosphate-dependent transferase BED35_10820 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria BED35_10820 IPR026330 Succinylornithine transaminase BED35_10825 IPR007041 Arginine N-succinyltransferase Ast/AOST BED35_10825 IPR016181 Acyl-CoA N-acyltransferase BED35_10825 IPR017650 Arginine N-succinyltransferase AstA BED35_10830 IPR015590 Aldehyde dehydrogenase domain BED35_10830 IPR016160 Aldehyde dehydrogenase, cysteine active site BED35_10830 IPR016161 Aldehyde/histidinol dehydrogenase BED35_10830 IPR016162 Aldehyde dehydrogenase, N-terminal BED35_10830 IPR016163 Aldehyde dehydrogenase, C-terminal BED35_10830 IPR017649 Succinylglutamic semialdehyde dehydrogenase BED35_10830 IPR029510 Aldehyde dehydrogenase, glutamic acid active site BED35_10835 IPR007079 Succinylarginine dihydrolase BED35_10835 IPR037031 BED35_10835 BED35_10840 IPR007036 Succinylglutamate desuccinylase/aspartoacylase BED35_10840 IPR016681 Succinylglutamate desuccinylase BED35_10845 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED35_10845 IPR003346 Transposase, IS116/IS110/IS902 BED35_10850 IPR001702 Porin, Gram-negative type BED35_10850 IPR001897 Porin, gammaproteobacterial BED35_10850 IPR023614 Porin domain BED35_10855 IPR001584 Integrase, catalytic core BED35_10855 IPR012337 Ribonuclease H-like domain BED35_10855 IPR036397 BED35_10855 BED35_10860 IPR010921 Trp repressor/replication initiator BED35_10865 IPR007709 N-formylglutamate amidohydrolase BED35_10865 IPR010247 N-formylglutamate deformylase BED35_10870 IPR005920 Imidazolonepropionase BED35_10870 IPR006680 Amidohydrolase 1 BED35_10870 IPR011059 Metal-dependent hydrolase, composite domain BED35_10870 IPR032466 BED35_10870 BED35_10875 IPR000524 Transcription regulator HTH, GntR BED35_10875 IPR010248 Histidine utilization repressor BED35_10875 IPR011663 UbiC transcription regulator-associated BED35_10875 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain BED35_10875 IPR036388 BED35_10875 BED35_10875 IPR036390 BED35_10875 BED35_10880 IPR006680 Amidohydrolase 1 BED35_10880 IPR010252 Formiminoglutamate deiminase BED35_10880 IPR011059 Metal-dependent hydrolase, composite domain BED35_10880 IPR032466 BED35_10880 BED35_10900 IPR005546 Autotransporter beta-domain BED35_10900 IPR006315 Outer membrane autotransporter barrel BED35_10900 IPR011050 Pectin lyase fold/virulence factor BED35_10900 IPR036709 BED35_10900 BED35_10905 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family BED35_10905 IPR022133 Ribose-5-phosphate isomerase, C-terminal BED35_10905 IPR036569 BED35_10905 BED35_10910 IPR011055 Duplicated hybrid motif BED35_10910 IPR016047 Peptidase M23 BED35_10910 IPR018392 LysM domain BED35_10910 IPR036779 BED35_10910 BED35_10915 IPR000771 Ketose-bisphosphate aldolase, class-II BED35_10915 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY BED35_10915 IPR013785 Aldolase-type TIM barrel BED35_10920 IPR001347 Sugar isomerase (SIS) BED35_10920 IPR014180 Sugar isomerase, AgaS BED35_10925 IPR004701 Phosphotransferase system, mannose-type IIA component BED35_10925 IPR036662 BED35_10925 BED35_10930 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component BED35_10940 IPR004720 Phosphotransferase system, sorbose subfamily IIB component BED35_10940 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup BED35_10940 IPR036667 BED35_10940 BED35_10945 IPR012062 D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit GatZ/KbaZ BED35_10945 IPR013785 Aldolase-type TIM barrel BED35_10950 IPR001034 HTH DeoR N-terminal domain BED35_10950 IPR014036 DeoR C-terminal sensor domain BED35_10950 IPR018356 Transcription regulator, HTH DeoR-type, conserved site BED35_10950 IPR036388 BED35_10950 BED35_10950 IPR036390 BED35_10950 BED35_10950 IPR037171 BED35_10950 BED35_10960 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED35_10960 IPR003346 Transposase, IS116/IS110/IS902 BED35_10965 IPR005430 P pili tip fibrillum PapF protein BED35_10965 IPR010546 Protein of unknown function DUF1120 BED35_10970 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F BED35_10970 IPR002942 RNA-binding S4 domain BED35_10970 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F BED35_10970 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site BED35_10970 IPR020103 Pseudouridine synthase, catalytic domain BED35_10970 IPR036986 BED35_10970 BED35_10975 IPR004445 Sodium/glutamate symporter BED35_10985 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED35_10990 IPR003346 Transposase, IS116/IS110/IS902 BED35_10995 IPR010017 tRNA (mo5U34)-methyltransferase BED35_10995 IPR027555 tRNA (mo5U34)-methyltransferase-like BED35_10995 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BED35_11000 IPR005271 tRNA (cmo5U34)-methyltransferase BED35_11000 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BED35_11005 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein BED35_11005 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain BED35_11010 IPR002763 Protein of unknown function DUF72 BED35_11010 IPR036520 BED35_11010 BED35_11015 IPR000868 Isochorismatase-like BED35_11015 IPR036380 BED35_11015 BED35_11020 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb BED35_11020 IPR004115 GAD-like domain BED35_11020 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) BED35_11020 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type BED35_11020 IPR004524 Aspartate-tRNA ligase, class IIb, bacterial/mitochondrial-type BED35_11020 IPR012340 Nucleic acid-binding, OB-fold BED35_11020 IPR029351 GAD domain BED35_11025 IPR000086 NUDIX hydrolase domain BED35_11025 IPR003564 dATP pyrophosphohydrolase BED35_11025 IPR015797 NUDIX hydrolase domain-like BED35_11025 IPR020084 NUDIX hydrolase, conserved site BED35_11030 IPR002876 Transcriptional regulator TACO1-like BED35_11030 IPR017856 Integrase, N-terminal zinc-binding domain-like BED35_11030 IPR026564 Transcriptional regulator TACO1-like, domain 3 BED35_11030 IPR029072 YebC-like BED35_11035 IPR002176 Crossover junction endodeoxyribonuclease RuvC BED35_11035 IPR012337 Ribonuclease H-like domain BED35_11035 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site BED35_11035 IPR036397 BED35_11035 BED35_11040 IPR000085 Bacterial DNA recombination protein RuvA BED35_11040 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 BED35_11040 IPR010994 RuvA domain 2-like BED35_11040 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal BED35_11040 IPR012340 Nucleic acid-binding, OB-fold BED35_11040 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial BED35_11040 IPR036267 BED35_11040 BED35_11045 IPR003593 AAA+ ATPase domain BED35_11045 IPR004605 DNA helicase, Holliday junction RuvB type BED35_11045 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal BED35_11045 IPR008824 DNA helicase, Holliday junction RuvB type, N-terminal BED35_11045 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_11045 IPR036388 BED35_11045 BED35_11045 IPR036390 BED35_11045 BED35_11050 IPR000109 Proton-dependent oligopeptide transporter family BED35_11050 IPR005279 Amino acid/peptide transporter family BED35_11050 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site BED35_11050 IPR023778 Amino acid/peptide transporter family, dipeptide/tripeptide permease B BED35_11050 IPR036259 BED35_11050 BED35_11055 IPR001626 ABC-3 BED35_11055 IPR037294 BED35_11055 BED35_11060 IPR003439 ABC transporter-like BED35_11060 IPR003593 AAA+ ATPase domain BED35_11060 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_11065 IPR006127 Periplasmic solute binding protein family BED35_11070 IPR007340 Opacity-associated protein A BED35_11070 IPR011055 Duplicated hybrid motif BED35_11070 IPR013731 Opacity-associated protein A, N-terminal BED35_11070 IPR016047 Peptidase M23 BED35_11070 IPR018392 LysM domain BED35_11075 IPR004960 Bacterial lipid A biosynthesis acyltransferase BED35_11075 IPR011921 Lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase BED35_11090 IPR001697 Pyruvate kinase BED35_11090 IPR011037 Pyruvate kinase-like, insert domain BED35_11090 IPR015793 Pyruvate kinase, barrel BED35_11090 IPR015795 Pyruvate kinase, C-terminal BED35_11090 IPR015806 Pyruvate kinase, beta-barrel insert domain BED35_11090 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain BED35_11090 IPR018209 Pyruvate kinase, active site BED35_11090 IPR036918 BED35_11090 BED35_11095 IPR000281 Helix-turn-helix protein RpiR BED35_11095 IPR001347 Sugar isomerase (SIS) BED35_11095 IPR009057 Homeodomain-like BED35_11095 IPR036388 BED35_11095 BED35_11100 IPR001282 Glucose-6-phosphate dehydrogenase BED35_11100 IPR019796 Glucose-6-phosphate dehydrogenase, active site BED35_11100 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding BED35_11100 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal BED35_11100 IPR036291 BED35_11100 BED35_11105 IPR000887 KDPG/KHG aldolase BED35_11105 IPR013785 Aldolase-type TIM barrel BED35_11105 IPR031337 BED35_11105 BED35_11105 IPR031338 BED35_11105 BED35_11110 IPR000390 Small multidrug resistance protein family BED35_11110 IPR023740 Spermidine export protein MdtJ BED35_11115 IPR000390 Small multidrug resistance protein family BED35_11115 IPR023737 Spermidine export protein MdtI BED35_11120 IPR006175 YjgF/Yer057p/UK114 family BED35_11120 IPR019897 YjgF-like protein, conserved site BED35_11120 IPR035959 BED35_11120 BED35_11125 IPR006555 ATP-dependent helicase, C-terminal BED35_11125 IPR010614 DEAD2 BED35_11125 IPR014001 Helicase, superfamily 1/2, ATP-binding domain BED35_11125 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_11130 IPR000905 Gcp-like domain BED35_11130 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ BED35_11140 IPR000873 AMP-dependent synthetase/ligase BED35_11140 IPR020845 AMP-binding, conserved site BED35_11140 IPR025110 AMP-binding enzyme C-terminal domain BED35_11145 IPR002121 HRDC domain BED35_11145 IPR002562 3'-5' exonuclease domain BED35_11145 IPR006292 Ribonuclease D BED35_11145 IPR010997 HRDC-like BED35_11145 IPR012337 Ribonuclease H-like domain BED35_11145 IPR036397 BED35_11145 BED35_11150 IPR005527 Septum formation topological specificity factor MinE BED35_11150 IPR036707 BED35_11150 BED35_11155 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain BED35_11155 IPR010223 ATP binding protein MinD, bacterial-type BED35_11155 IPR025501 ATP binding protein MinD BED35_11155 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_11160 IPR005526 Septum formation inhibitor MinC, C-terminal BED35_11160 IPR007874 Septum formation inhibitor MinC, N-terminal BED35_11160 IPR013033 Septum formation inhibitor MinC BED35_11160 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal BED35_11160 IPR036145 BED35_11160 BED35_11160 IPR038061 BED35_11160 BED35_11170 IPR027354 YcgL domain BED35_11170 IPR038068 BED35_11170 BED35_11175 IPR011970 Lytic murein transglycosylase BED35_11175 IPR023346 Lysozyme-like domain BED35_11175 IPR031304 BED35_11175 BED35_11180 IPR011234 Fumarylacetoacetase, C-terminal-related BED35_11180 IPR036663 BED35_11180 BED35_11185 IPR005358 Putative zinc- or iron-chelating domain containing protein BED35_11185 IPR008228 Uncharacterised conserved protein UCP006173 BED35_11200 IPR000620 Drug/metabolite transporter BED35_11210 IPR006685 Mechanosensitive ion channel MscS BED35_11210 IPR010920 Like-Sm (LSM) domain BED35_11210 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 BED35_11210 IPR011066 Mechanosensitive ion channel MscS, C-terminal BED35_11210 IPR023408 BED35_11210 BED35_11215 IPR004045 Glutathione S-transferase, N-terminal BED35_11215 IPR034338 BED35_11215 BED35_11215 IPR036249 BED35_11215 BED35_11215 IPR036282 BED35_11215 BED35_11220 IPR000182 GNAT domain BED35_11220 IPR016181 Acyl-CoA N-acyltransferase BED35_11230 IPR007374 ASCH domain BED35_11230 IPR009326 Protein of unknown function DUF984 BED35_11230 IPR015947 PUA-like domain BED35_11235 IPR009950 Protein of unknown function DUF1480 BED35_11245 IPR008962 PapD-like BED35_11245 IPR013783 Immunoglobulin-like fold BED35_11245 IPR016147 PapD, N-terminal, bacterial BED35_11250 IPR007893 Spore coat protein U BED35_11255 IPR007893 Spore coat protein U BED35_11265 IPR011701 Major facilitator superfamily BED35_11265 IPR036259 BED35_11265 BED35_11270 IPR000847 Transcription regulator HTH, LysR BED35_11270 IPR005119 LysR, substrate-binding BED35_11270 IPR036388 BED35_11270 BED35_11270 IPR036390 BED35_11270 BED35_11275 IPR003399 Mammalian cell entry-related BED35_11280 IPR005219 Conserved hypothetical protein CHP00155 BED35_11280 IPR007498 Paraquat-inducible protein A BED35_11285 IPR003018 GAF domain BED35_11285 IPR029016 GAF domain-like BED35_11290 IPR016103 ProQ/FinO domain BED35_11290 IPR023529 Transporter ProP effector, ProQ BED35_11290 IPR035236 BED35_11290 BED35_11290 IPR036442 BED35_11290 BED35_11295 IPR001478 PDZ domain BED35_11295 IPR004447 C-terminal-processing peptidase S41A BED35_11295 IPR005151 Tail specific protease BED35_11295 IPR020992 Tail specific protease, C-terminal BED35_11295 IPR029045 ClpP/crotonase-like domain BED35_11295 IPR036034 BED35_11295 BED35_11300 IPR001915 Peptidase M48 BED35_11300 IPR022919 Peptidase M48, protease HtpX, putative BED35_11315 IPR015943 WD40/YVTN repeat-like-containing domain BED35_11315 IPR027946 Oligogalacturonate lyase domain BED35_11320 IPR005471 Transcription regulator IclR, N-terminal BED35_11320 IPR014757 Transcription regulator IclR, C-terminal BED35_11320 IPR029016 GAF domain-like BED35_11320 IPR036388 BED35_11320 BED35_11320 IPR036390 BED35_11320 BED35_11325 IPR002477 Peptidoglycan binding-like BED35_11325 IPR002502 N-acetylmuramoyl-L-alanine amidase domain BED35_11325 IPR036365 BED35_11325 BED35_11325 IPR036366 BED35_11325 BED35_11325 IPR036505 BED35_11325 BED35_11335 IPR007404 Protein of unknown function DUF457 BED35_11335 IPR016956 LexA regulated metal-dependent membrane hydrolase, predicted BED35_11345 IPR009331 Oligogalacturonate-specific porin BED35_11350 IPR006059 Bacterial extracellular solute-binding, family 1 BED35_11355 IPR003439 ABC transporter-like BED35_11355 IPR003593 AAA+ ATPase domain BED35_11355 IPR008995 Molybdate/tungstate binding, C-terminal BED35_11355 IPR013611 Transport-associated OB, type 2 BED35_11355 IPR017871 ABC transporter, conserved site BED35_11355 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_11360 IPR000515 MetI-like domain BED35_11360 IPR035906 BED35_11360 BED35_11365 IPR000515 MetI-like domain BED35_11365 IPR035906 BED35_11365 BED35_11370 IPR010702 Periplasmic pectate lyase BED35_11375 IPR002347 Glucose/ribitol dehydrogenase BED35_11375 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase BED35_11375 IPR020904 Short-chain dehydrogenase/reductase, conserved site BED35_11375 IPR036291 BED35_11375 BED35_11380 IPR007045 5-keto 4-deoxyuronate isomerase BED35_11380 IPR011051 RmlC-like cupin domain BED35_11380 IPR014710 RmlC-like jelly roll fold BED35_11380 IPR021120 KduI/IolB isomerase BED35_11380 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal domain BED35_11385 IPR011051 RmlC-like cupin domain BED35_11385 IPR013096 Cupin 2, conserved barrel BED35_11385 IPR014710 RmlC-like jelly roll fold BED35_11385 IPR025499 Pectin degradation protein KdgF BED35_11390 IPR001207 Transposase, mutator type BED35_11395 IPR006439 HAD hydrolase, subfamily IA BED35_11395 IPR023198 Phosphoglycolate phosphatase, domain 2 BED35_11395 IPR023214 HAD-like domain BED35_11395 IPR036412 BED35_11395 BED35_11400 IPR025229 YniB-like protein BED35_11405 IPR000847 Transcription regulator HTH, LysR BED35_11405 IPR005119 LysR, substrate-binding BED35_11405 IPR036388 BED35_11405 BED35_11405 IPR036390 BED35_11405 BED35_11410 IPR003702 Acetyl-CoA hydrolase/transferase BED35_11410 IPR017821 Succinate CoA transferase BED35_11410 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain BED35_11410 IPR037171 BED35_11410 BED35_11410 IPR038460 BED35_11410 BED35_11415 IPR001753 Crotonase superfamily BED35_11415 IPR014748 Crontonase, C-terminal BED35_11415 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site BED35_11415 IPR029045 ClpP/crotonase-like domain BED35_11420 IPR005129 ArgK protein BED35_11420 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_11430 IPR011009 Protein kinase-like domain BED35_11430 IPR016477 Fructosamine/Ketosamine-3-kinase BED35_11435 IPR001626 ABC-3 BED35_11435 IPR037294 BED35_11435 BED35_11440 IPR001626 ABC-3 BED35_11440 IPR037294 BED35_11440 BED35_11445 IPR003439 ABC transporter-like BED35_11445 IPR003593 AAA+ ATPase domain BED35_11445 IPR017871 ABC transporter, conserved site BED35_11445 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_11450 IPR006127 Periplasmic solute binding protein family BED35_11450 IPR006128 Adhesion lipoprotein BED35_11450 IPR006129 Adhesin B BED35_11455 IPR000189 Prokaryotic transglycosylase, active site BED35_11455 IPR008258 Lytic transglycosylase-like SLT domain BED35_11455 IPR023346 Lysozyme-like domain BED35_11460 IPR002771 Multiple antibiotic resistance (MarC)-related BED35_11485 IPR007563 Protein of unknown function DUF554 BED35_11490 IPR025309 KTSC domain BED35_11495 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain BED35_11495 IPR002320 Threonine-tRNA ligase, class IIa BED35_11495 IPR004095 TGS BED35_11495 IPR004154 Anticodon-binding BED35_11495 IPR012675 Beta-grasp domain BED35_11495 IPR012676 TGS-like BED35_11495 IPR012947 Threonyl/alanyl tRNA synthetase, SAD BED35_11495 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain BED35_11495 IPR036621 BED35_11495 BED35_11500 IPR001288 Translation initiation factor 3 BED35_11500 IPR019815 Translation initiation factor 3, C-terminal BED35_11500 IPR036788 BED35_11500 BED35_11505 IPR001706 Ribosomal protein L35, non-mitochondrial BED35_11505 IPR018265 Ribosomal protein L35, conserved site BED35_11505 IPR021137 Ribosomal protein L35 BED35_11505 IPR037229 BED35_11505 BED35_11510 IPR005813 Ribosomal protein L20 BED35_11510 IPR035566 BED35_11510 BED35_11515 IPR002319 Phenylalanyl-tRNA synthetase BED35_11515 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal BED35_11515 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit BED35_11515 IPR010978 tRNA-binding arm BED35_11515 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial BED35_11520 IPR002547 tRNA-binding domain BED35_11520 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit BED35_11520 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding BED35_11520 IPR005146 B3/B4 tRNA-binding domain BED35_11520 IPR005147 tRNA synthetase, B5-domain BED35_11520 IPR009061 DNA binding domain, putative BED35_11520 IPR012340 Nucleic acid-binding, OB-fold BED35_11520 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 BED35_11520 IPR036690 BED35_11520 BED35_11525 IPR000119 Histone-like bacterial DNA-binding protein BED35_11525 IPR005684 Integration host factor, alpha subunit BED35_11525 IPR010992 Integration host factor (IHF)-like DNA-binding domain BED35_11525 IPR020816 Histone-like DNA-binding protein, conserved site BED35_11530 IPR009057 Homeodomain-like BED35_11530 IPR038717 BED35_11530 BED35_11535 IPR019638 Protein of unknown function DUF2502 BED35_11540 IPR000522 ABC transporter, permease protein BED35_11540 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC BED35_11540 IPR037294 BED35_11540 BED35_11545 IPR000889 Glutathione peroxidase BED35_11545 IPR029759 Glutathione peroxidase active site BED35_11545 IPR033674 BED35_11545 BED35_11545 IPR036249 BED35_11545 BED35_11550 IPR003439 ABC transporter-like BED35_11550 IPR003593 AAA+ ATPase domain BED35_11550 IPR017871 ABC transporter, conserved site BED35_11550 IPR023693 ABC transporter, vitamin B12, BtuD BED35_11550 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_11555 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase BED35_11555 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BED35_11555 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 BED35_11555 IPR015424 Pyridoxal phosphate-dependent transferase BED35_11555 IPR022850 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase, ArnB BED35_11560 IPR001173 Glycosyltransferase 2-like BED35_11560 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase BED35_11560 IPR029044 Nucleotide-diphospho-sugar transferases BED35_11565 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain BED35_11565 IPR002376 Formyl transferase, N-terminal BED35_11565 IPR005793 Formyl transferase, C-terminal BED35_11565 IPR011034 Formyl transferase, C-terminal-like BED35_11565 IPR021168 Bifunctional polymyxin resistance protein, ArnA BED35_11565 IPR036291 BED35_11565 BED35_11565 IPR036477 BED35_11565 BED35_11570 IPR002509 Polysaccharide deacetylase BED35_11570 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel BED35_11570 IPR023557 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD, probable BED35_11575 IPR003342 Glycosyl transferase, family 39 BED35_11575 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase BED35_11580 IPR000620 Drug/metabolite transporter BED35_11580 IPR022883 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase, subunit ArnE BED35_11585 IPR022832 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF BED35_11590 IPR000064 Endopeptidase, NLPC/P60 domain BED35_11590 IPR038765 BED35_11590 BED35_11600 IPR003846 Uncharacterised protein family UPF0061 BED35_11615 IPR000531 TonB-dependent receptor, beta-barrel BED35_11615 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor BED35_11615 IPR011276 TonB-dependent haem/haemoglobin receptor BED35_11615 IPR012910 TonB-dependent receptor, plug BED35_11615 IPR036942 BED35_11615 BED35_11615 IPR037066 BED35_11615 BED35_11620 IPR019600 Hemin uptake protein HemP BED35_11625 IPR006218 DAHP synthetase I/KDSA BED35_11625 IPR006219 DHAP synthase, class 1 BED35_11625 IPR013785 Aldolase-type TIM barrel BED35_11630 IPR005177 Bifunctional kinase-pyrophosphorylase BED35_11630 IPR008917 Transcription factor, Skn-1-like, DNA-binding domain BED35_11630 IPR026530 Phosphoenolpyruvate synthase regulatory protein BED35_11635 IPR000121 PEP-utilising enzyme, C-terminal BED35_11635 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding BED35_11635 IPR006319 Phosphoenolpyruvate synthase BED35_11635 IPR008279 PEP-utilising enzyme, mobile domain BED35_11635 IPR013815 ATP-grasp fold, subdomain 1 BED35_11635 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain BED35_11635 IPR018274 PEP-utilising enzyme, active site BED35_11635 IPR023151 PEP-utilising enzyme, conserved site BED35_11635 IPR036637 BED35_11635 BED35_11645 IPR002549 Uncharacterised protein family UPF0118 BED35_11650 IPR004113 FAD-linked oxidase, C-terminal BED35_11650 IPR006094 FAD linked oxidase, N-terminal BED35_11650 IPR009051 Alpha-helical ferredoxin BED35_11650 IPR016164 FAD-linked oxidase-like, C-terminal BED35_11650 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BED35_11650 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BED35_11650 IPR036318 BED35_11650 BED35_11655 IPR003736 Phenylacetic acid degradation-related domain BED35_11655 IPR006683 Thioesterase superfamily BED35_11655 IPR029069 HotDog domain BED35_11655 IPR030863 BED35_11655 BED35_11660 IPR000361 FeS cluster biogenesis BED35_11660 IPR016092 FeS cluster insertion protein BED35_11660 IPR017870 FeS cluster insertion, C-terminal, conserved site BED35_11660 IPR035903 BED35_11660 BED35_11665 IPR000825 SUF system FeS cluster assembly, SufBD BED35_11665 IPR010231 SUF system FeS cluster assembly, SufB BED35_11665 IPR037284 BED35_11665 BED35_11670 IPR003439 ABC transporter-like BED35_11670 IPR003593 AAA+ ATPase domain BED35_11670 IPR010230 FeS cluster assembly SUF system, ATPase SufC BED35_11670 IPR017871 ABC transporter, conserved site BED35_11670 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_11675 IPR000825 SUF system FeS cluster assembly, SufBD BED35_11675 IPR011542 SUF system FeS cluster assembly, SufD BED35_11675 IPR037284 BED35_11675 BED35_11680 IPR000192 Aminotransferase class V domain BED35_11680 IPR010970 Cysteine desulfurase, SufS BED35_11680 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BED35_11680 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 BED35_11680 IPR015424 Pyridoxal phosphate-dependent transferase BED35_11680 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site BED35_11685 IPR003808 Fe-S metabolism associated domain, SufE-like BED35_11685 IPR023939 Cysteine desulfuration protein SufE BED35_11690 IPR005490 L,D-transpeptidase catalytic domain BED35_11690 IPR038063 BED35_11690 BED35_11695 IPR006817 Lipoprotein leucine-zipper BED35_11695 IPR016367 Murein-lipoprotein BED35_11700 IPR001697 Pyruvate kinase BED35_11700 IPR011037 Pyruvate kinase-like, insert domain BED35_11700 IPR015793 Pyruvate kinase, barrel BED35_11700 IPR015795 Pyruvate kinase, C-terminal BED35_11700 IPR015806 Pyruvate kinase, beta-barrel insert domain BED35_11700 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain BED35_11700 IPR018209 Pyruvate kinase, active site BED35_11700 IPR036918 BED35_11700 BED35_11720 IPR001783 Lumazine-binding protein BED35_11720 IPR017938 Riboflavin synthase-like beta-barrel BED35_11720 IPR023366 ATP synthase subunit alpha-like domain BED35_11720 IPR026017 Lumazine-binding domain BED35_11725 IPR003333 Mycolic acid cyclopropane synthase BED35_11725 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BED35_11730 IPR004812 Drug resistance transporter Bcr/CmlA subfamily BED35_11730 IPR011701 Major facilitator superfamily BED35_11730 IPR036259 BED35_11730 BED35_11735 IPR000847 Transcription regulator HTH, LysR BED35_11735 IPR005119 LysR, substrate-binding BED35_11735 IPR036388 BED35_11735 BED35_11735 IPR036390 BED35_11735 BED35_11740 IPR000843 Transcription regulator HTH, LacI BED35_11740 IPR010982 Lambda repressor-like, DNA-binding domain BED35_11740 IPR023588 Transcription regulator HTH, PurR BED35_11740 IPR028082 Periplasmic binding protein-like I BED35_11745 IPR001189 Manganese/iron superoxide dismutase BED35_11745 IPR019831 Manganese/iron superoxide dismutase, N-terminal BED35_11745 IPR019832 Manganese/iron superoxide dismutase, C-terminal BED35_11745 IPR019833 Manganese/iron superoxide dismutase, binding site BED35_11745 IPR036314 BED35_11745 BED35_11745 IPR036324 BED35_11745 BED35_11750 IPR000064 Endopeptidase, NLPC/P60 domain BED35_11750 IPR038765 BED35_11750 BED35_11755 IPR002109 Glutaredoxin BED35_11755 IPR004480 Monothiol glutaredoxin-related BED35_11755 IPR014434 Monothiol glutaredoxin BED35_11755 IPR036249 BED35_11755 BED35_11760 IPR005987 Ribonuclease T BED35_11760 IPR012337 Ribonuclease H-like domain BED35_11760 IPR013520 Exonuclease, RNase T/DNA polymerase III BED35_11760 IPR036397 BED35_11760 BED35_11765 IPR008490 Transposase InsH, N-terminal BED35_11765 IPR025668 Transposase DDE domain BED35_11770 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BED35_11770 IPR004361 Glyoxalase I BED35_11770 IPR018146 Glyoxalase I, conserved site BED35_11770 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BED35_11780 IPR001647 DNA-binding HTH domain, TetR-type BED35_11780 IPR009057 Homeodomain-like BED35_11780 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal BED35_11780 IPR036271 BED35_11780 BED35_11785 IPR000917 Sulfatase BED35_11785 IPR012549 Domain of unknown function DUF1705 BED35_11785 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha BED35_11785 IPR017850 Alkaline-phosphatase-like, core domain BED35_11790 IPR010710 Protein of unknown function DUF1289 BED35_11795 IPR020471 Aldo/keto reductase subgroup BED35_11795 IPR023210 NADP-dependent oxidoreductase domain BED35_11795 IPR036812 BED35_11795 BED35_11800 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein BED35_11810 IPR012451 Protein of unknown function DUF1656 BED35_11815 IPR000835 MarR-type HTH domain BED35_11815 IPR023071 Transcriptional regulator, SlyA BED35_11815 IPR023187 Transcriptional regulator MarR-type, conserved site BED35_11815 IPR036388 BED35_11815 BED35_11815 IPR036390 BED35_11815 BED35_11820 IPR008816 Glycine zipper 2TM domain BED35_11825 IPR005338 Anhydro-N-acetylmuramic acid kinase BED35_11830 IPR018660 C-type lysozyme, inhibitor BED35_11830 IPR036328 BED35_11830 BED35_11835 IPR000659 Pyridoxamine 5'-phosphate oxidase BED35_11835 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain BED35_11835 IPR012349 FMN-binding split barrel BED35_11835 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal BED35_11835 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site BED35_11840 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site BED35_11840 IPR002305 Aminoacyl-tRNA synthetase, class Ic BED35_11840 IPR002307 Tyrosine-tRNA ligase BED35_11840 IPR002942 RNA-binding S4 domain BED35_11840 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED35_11840 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 BED35_11840 IPR036986 BED35_11840 BED35_11850 IPR004045 Glutathione S-transferase, N-terminal BED35_11850 IPR004046 Glutathione S-transferase, C-terminal BED35_11850 IPR036249 BED35_11850 BED35_11850 IPR036282 BED35_11850 BED35_11855 IPR020317 Uncharacterised protein family YjbD BED35_11860 IPR009698 Protein of unknown function DUF1282 BED35_11865 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BED35_11865 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BED35_11870 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED35_11870 IPR003346 Transposase, IS116/IS110/IS902 BED35_11875 IPR000109 Proton-dependent oligopeptide transporter family BED35_11875 IPR005279 Amino acid/peptide transporter family BED35_11875 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site BED35_11875 IPR023517 Amino acid/peptide transporter family, dipeptide and tripeptide permease A BED35_11875 IPR036259 BED35_11875 BED35_11880 IPR000847 Transcription regulator HTH, LysR BED35_11880 IPR005119 LysR, substrate-binding BED35_11880 IPR036388 BED35_11880 BED35_11880 IPR036390 BED35_11880 BED35_11885 IPR029032 AhpD-like BED35_11895 IPR003439 ABC transporter-like BED35_11895 IPR003593 AAA+ ATPase domain BED35_11895 IPR017871 ABC transporter, conserved site BED35_11895 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_11900 IPR003439 ABC transporter-like BED35_11900 IPR003593 AAA+ ATPase domain BED35_11900 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal BED35_11900 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_11905 IPR000515 MetI-like domain BED35_11905 IPR025966 Oligopeptide transport permease C-like, N-terminal domain BED35_11905 IPR035906 BED35_11905 BED35_11910 IPR000515 MetI-like domain BED35_11910 IPR035906 BED35_11910 BED35_11915 IPR000914 Bacterial extracellular solute-binding protein, family 5 BED35_11915 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site BED35_11915 IPR030678 BED35_11915 BED35_11930 IPR002078 RNA polymerase sigma factor 54 interaction domain BED35_11930 IPR002197 DNA binding HTH domain, Fis-type BED35_11930 IPR003593 AAA+ ATPase domain BED35_11930 IPR009057 Homeodomain-like BED35_11930 IPR014317 Transcription activator PspF BED35_11930 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BED35_11930 IPR025944 Sigma-54 interaction domain, conserved site BED35_11930 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_11935 IPR007157 PspA/IM30 BED35_11935 IPR014319 Phage shock protein, PspA BED35_11940 IPR009554 Phage shock protein, PspB BED35_11945 IPR007168 Phage shock protein, PspC, N-terminal BED35_11945 IPR014320 Phage shock protein, PspC BED35_11950 IPR014321 Phage shock protein, PspD BED35_11955 IPR007413 Protein of unknown function DUF463, YcjX-like protein BED35_11960 IPR006507 Uncharacterised protein family UPF0283 BED35_11960 IPR021147 Protein of unknown function DUF697 BED35_11965 IPR014914 RES BED35_11970 IPR011979 Conserved hypothetical protein CHP02293 BED35_11970 IPR024467 Domain of unknown function DUF2384 BED35_11975 IPR000014 PAS domain BED35_11975 IPR002078 RNA polymerase sigma factor 54 interaction domain BED35_11975 IPR003593 AAA+ ATPase domain BED35_11975 IPR009057 Homeodomain-like BED35_11975 IPR013767 PAS fold BED35_11975 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BED35_11975 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BED35_11975 IPR025944 Sigma-54 interaction domain, conserved site BED35_11975 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_11975 IPR030828 BED35_11975 BED35_11975 IPR035965 BED35_11975 BED35_11980 IPR002065 Putative thiol peroxidase Tpx BED35_11980 IPR013740 Redoxin BED35_11980 IPR018219 Thiol peroxidase conserved site BED35_11980 IPR036249 BED35_11980 BED35_11985 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain BED35_11985 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal BED35_11985 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site BED35_11985 IPR029017 Enolase N-terminal domain-like BED35_11985 IPR029065 Enolase C-terminal domain-like BED35_11985 IPR036849 BED35_11985 BED35_11990 IPR000834 Peptidase M14, carboxypeptidase A BED35_11995 IPR000914 Bacterial extracellular solute-binding protein, family 5 BED35_11995 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site BED35_11995 IPR030678 BED35_11995 BED35_12000 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB BED35_12000 IPR023714 Zinc transport protein ZntB BED35_12005 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase BED35_12005 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA BED35_12005 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED35_12005 IPR035107 BED35_12005 BED35_12010 IPR000909 Phospholipase C, phosphatidylinositol-specific , X domain BED35_12010 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain BED35_12020 IPR000390 Small multidrug resistance protein family BED35_12025 IPR003416 MgtC/SapB/SrpB transporter BED35_12030 IPR005590 Protein of unknown function DUF333 BED35_12035 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BED35_12035 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain BED35_12035 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 BED35_12035 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site BED35_12035 IPR036291 BED35_12035 BED35_12040 IPR021730 Dicarboxylate transport BED35_12045 IPR025985 YnbE-like lipoprotein BED35_12050 IPR008309 Uncharacterised conserved protein UCP025560 BED35_12055 IPR003680 Flavodoxin-like fold BED35_12055 IPR023048 NADH-azoreductase, FMN-dependent BED35_12055 IPR029039 Flavoprotein-like BED35_12060 IPR001650 Helicase, C-terminal BED35_12060 IPR003593 AAA+ ATPase domain BED35_12060 IPR007502 Helicase-associated domain BED35_12060 IPR010222 RNA helicase, ATP-dependent DEAH box, HrpA-type BED35_12060 IPR011545 DEAD/DEAH box helicase domain BED35_12060 IPR011709 Domain of unknown function DUF1605 BED35_12060 IPR014001 Helicase, superfamily 1/2, ATP-binding domain BED35_12060 IPR024590 RNA helicase, ATP-dependent DEAH box, HrpA, C-terminal BED35_12060 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_12065 IPR009241 Addiction module killer protein BED35_12070 IPR001387 Cro/C1-type helix-turn-helix domain BED35_12070 IPR010982 Lambda repressor-like, DNA-binding domain BED35_12075 IPR001254 Peptidase S1 BED35_12075 IPR008256 Peptidase S1B BED35_12075 IPR009003 Trypsin-like cysteine/serine peptidase domain BED35_12075 IPR018114 Peptidase S1, trypsin family, active site BED35_12075 IPR033116 BED35_12075 BED35_12085 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase BED35_12090 IPR003594 Histidine kinase-like ATPase, C-terminal domain BED35_12090 IPR003660 HAMP linker domain BED35_12090 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain BED35_12090 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BED35_12090 IPR036097 BED35_12090 BED35_12090 IPR036890 BED35_12090 BED35_12095 IPR001789 Signal transduction response regulator, receiver domain BED35_12095 IPR001867 Signal transduction response regulator, C-terminal BED35_12095 IPR011006 CheY-like superfamily BED35_12095 IPR036388 BED35_12095 BED35_12105 IPR002293 Amino acid/polyamine transporter I BED35_12105 IPR004754 Amino acid antiporter BED35_12110 IPR010854 Domain of unknown function DUF1471 BED35_12110 IPR025539 YdgH protein BED35_12110 IPR025543 Dodecin-like BED35_12110 IPR036275 BED35_12110 BED35_12120 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain BED35_12120 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal BED35_12120 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 BED35_12120 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 BED35_12120 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal BED35_12120 IPR026255 NAD(P) transhydrogenase, alpha subunit BED35_12120 IPR036291 BED35_12120 BED35_12125 IPR012136 NADP transhydrogenase, beta subunit BED35_12125 IPR029035 DHS-like NAD/FAD-binding domain BED35_12125 IPR034300 BED35_12125 BED35_12130 IPR006016 UspA BED35_12135 IPR000595 Cyclic nucleotide-binding domain BED35_12135 IPR012318 Helix-turn-helix motif, Crp-type BED35_12135 IPR014710 RmlC-like jelly roll fold BED35_12135 IPR018335 Transcription regulator HTH, Crp-type, conserved site BED35_12135 IPR018490 Cyclic nucleotide-binding-like BED35_12135 IPR036388 BED35_12135 BED35_12135 IPR036390 BED35_12135 BED35_12140 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site BED35_12140 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain BED35_12140 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding BED35_12140 IPR023546 Methylated-DNA--protein-cysteine methyltransferase BED35_12140 IPR036217 BED35_12140 BED35_12140 IPR036388 BED35_12140 BED35_12140 IPR036631 BED35_12140 BED35_12145 IPR007709 N-formylglutamate amidohydrolase BED35_12145 IPR011227 Uncharacterised conserved protein UCP029730 BED35_12150 IPR007553 Domain of unknown function DUF523 BED35_12155 IPR010499 Bacterial transcription activator, effector binding BED35_12155 IPR011256 Regulatory factor, effector binding domain BED35_12155 IPR024911 DNA gyrase inhibitor GyrI BED35_12155 IPR029442 GyrI-like small molecule binding domain BED35_12160 IPR002347 Glucose/ribitol dehydrogenase BED35_12160 IPR036291 BED35_12160 BED35_12180 IPR025266 TerB, N-terminal BED35_12180 IPR028932 TerB-C domain BED35_12180 IPR029024 TerB-like BED35_12185 IPR006439 HAD hydrolase, subfamily IA BED35_12185 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB BED35_12185 IPR023198 Phosphoglycolate phosphatase, domain 2 BED35_12185 IPR023214 HAD-like domain BED35_12185 IPR036412 BED35_12185 BED35_12195 IPR000399 TPP-binding enzyme, conserved site BED35_12195 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding BED35_12195 IPR012000 Thiamine pyrophosphate enzyme, central domain BED35_12195 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain BED35_12195 IPR012846 Acetolactate synthase, large subunit, biosynthetic BED35_12195 IPR029035 DHS-like NAD/FAD-binding domain BED35_12195 IPR029061 Thiamin diphosphate-binding fold BED35_12200 IPR010846 Protein of unknown function DUF1460 BED35_12200 IPR038765 BED35_12200 BED35_12205 IPR002502 N-acetylmuramoyl-L-alanine amidase domain BED35_12205 IPR036365 BED35_12205 BED35_12205 IPR036366 BED35_12205 BED35_12205 IPR036505 BED35_12205 BED35_12215 IPR009216 Virulence factor SrfB BED35_12235 IPR027372 Phytase-like domain BED35_12245 IPR000847 Transcription regulator HTH, LysR BED35_12245 IPR036388 BED35_12245 BED35_12245 IPR036390 BED35_12245 BED35_12250 IPR005829 Sugar transporter, conserved site BED35_12250 IPR011701 Major facilitator superfamily BED35_12250 IPR036259 BED35_12250 BED35_12255 IPR027379 Cardiolipin synthase N-terminal BED35_12260 IPR000871 Beta-lactamase, class-A/D BED35_12260 IPR012338 Beta-lactamase/transpeptidase-like BED35_12260 IPR023650 Beta-lactamase, class-A active site BED35_12265 IPR008865 DNA replication terminus site-binding protein BED35_12265 IPR036381 BED35_12265 BED35_12265 IPR036384 BED35_12265 BED35_12270 IPR000792 Transcription regulator LuxR, C-terminal BED35_12270 IPR013656 PAS fold-4 BED35_12270 IPR016032 Signal transduction response regulator, C-terminal effector BED35_12270 IPR036388 BED35_12270 BED35_12275 IPR000362 Fumarate lyase family BED35_12275 IPR005677 Fumarate hydratase, class II BED35_12275 IPR008948 L-Aspartase-like BED35_12275 IPR018951 Fumarase C, C-terminal BED35_12275 IPR020557 Fumarate lyase, conserved site BED35_12275 IPR022761 Fumarate lyase, N-terminal BED35_12275 IPR024083 Fumarase/histidase, N-terminal BED35_12280 IPR001250 Mannose-6-phosphate isomerase, type I BED35_12280 IPR011051 RmlC-like cupin domain BED35_12280 IPR014710 RmlC-like jelly roll fold BED35_12280 IPR016305 Mannose-6-phosphate isomerase BED35_12280 IPR018050 Phosphomannose isomerase, type I, conserved site BED35_12285 IPR010352 Protein of unknown function DUF945 BED35_12295 IPR000843 Transcription regulator HTH, LacI BED35_12295 IPR001761 Periplasmic binding protein/LacI sugar binding domain BED35_12295 IPR010982 Lambda repressor-like, DNA-binding domain BED35_12295 IPR028082 Periplasmic binding protein-like I BED35_12300 IPR001996 Phosphotransferase system, IIB component, type 1 BED35_12300 IPR003352 Phosphotransferase system, EIIC BED35_12300 IPR011301 PTS system, maltose/glucose-specific IIBC component BED35_12300 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site BED35_12300 IPR036878 BED35_12300 BED35_12305 IPR004839 Aminotransferase, class I/classII BED35_12305 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BED35_12305 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 BED35_12305 IPR015424 Pyridoxal phosphate-dependent transferase BED35_12305 IPR027619 Putative C-S lyase BED35_12310 IPR001365 Adenosine/AMP deaminase domain BED35_12310 IPR006330 Adenosine/adenine deaminase BED35_12310 IPR006650 Adenosine/AMP deaminase active site BED35_12310 IPR028893 Adenosine deaminase BED35_12310 IPR032466 BED35_12310 BED35_12315 IPR016833 Putative sodium bile acid cotransporter BED35_12315 IPR038770 BED35_12315 BED35_12320 IPR000683 Oxidoreductase, N-terminal BED35_12320 IPR004104 Oxidoreductase, C-terminal BED35_12320 IPR036291 BED35_12320 BED35_12325 IPR003313 AraC-type arabinose-binding/dimerisation domain BED35_12325 IPR009057 Homeodomain-like BED35_12325 IPR018060 DNA binding HTH domain, AraC-type BED35_12325 IPR018062 HTH domain AraC-type, conserved site BED35_12325 IPR020449 Transcription regulator HTH, AraC- type BED35_12325 IPR037923 BED35_12325 BED35_12335 IPR003439 ABC transporter-like BED35_12335 IPR003593 AAA+ ATPase domain BED35_12335 IPR017871 ABC transporter, conserved site BED35_12335 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_12340 IPR001761 Periplasmic binding protein/LacI sugar binding domain BED35_12340 IPR026266 L-arabinose-binding periplasmic protein BED35_12340 IPR028082 Periplasmic binding protein-like I BED35_12345 IPR000577 BED35_12345 BED35_12345 IPR005929 L-ribulokinase BED35_12345 IPR018484 Carbohydrate kinase, FGGY, N-terminal BED35_12345 IPR018485 Carbohydrate kinase, FGGY, C-terminal BED35_12350 IPR003762 L-arabinose isomerase BED35_12350 IPR004216 L-fucose/L-arabinose isomerase, C-terminal BED35_12350 IPR009015 L-fucose isomerase, N-terminal/central domain BED35_12350 IPR024664 L-arabinose isomerase, C-terminal BED35_12350 IPR038583 BED35_12350 BED35_12360 IPR003959 ATPase, AAA-type, core BED35_12360 IPR014555 RecF-like BED35_12360 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_12370 IPR003997 RTX secretion protein D, Gram-negative bacteria BED35_12370 IPR006144 Secretion protein HlyD, conserved site BED35_12370 IPR010129 Type I secretion membrane fusion protein, HlyD BED35_12370 IPR039562 BED35_12370 BED35_12385 IPR019690 Protein of unknown function DUF2569 BED35_12390 IPR003667 Electron transport complex, Rnf/Nqr BED35_12390 IPR011293 Electron transport complex, RnfA BED35_12395 IPR007202 4Fe-4S domain BED35_12395 IPR010207 Electron transport complex, RnfB BED35_12395 IPR011005 Dihydropteroate synthase-like BED35_12395 IPR016463 Electron transport complex, RnfB, Proteobacteria BED35_12395 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BED35_12400 IPR009051 Alpha-helical ferredoxin BED35_12400 IPR010208 Electron transport complex protein RnfC BED35_12400 IPR011538 NADH:ubiquinone oxidoreductase, 51kDa subunit BED35_12400 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BED35_12400 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BED35_12400 IPR019554 Soluble ligand binding domain BED35_12400 IPR026902 RnfC Barrel sandwich hybrid domain BED35_12400 IPR037225 BED35_12400 BED35_12410 IPR009057 Homeodomain-like BED35_12410 IPR011256 Regulatory factor, effector binding domain BED35_12410 IPR018060 DNA binding HTH domain, AraC-type BED35_12410 IPR020449 Transcription regulator HTH, AraC- type BED35_12410 IPR029442 GyrI-like small molecule binding domain BED35_12415 IPR004338 NADH-quinone reductase NQR2/RnfD BED35_12415 IPR011303 Electron transport complex, RnfD BED35_12420 IPR007329 FMN-binding BED35_12420 IPR010209 Electron transport complex, RnfG BED35_12425 IPR003667 Electron transport complex, Rnf/Nqr BED35_12425 IPR010968 Electron transport complex, RnfE BED35_12430 IPR000445 Helix-hairpin-helix motif BED35_12430 IPR003265 HhH-GPD domain BED35_12430 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif BED35_12430 IPR004035 Endonuclease III, iron-sulphur binding site BED35_12430 IPR004036 Endonuclease III-like, conserved site-2 BED35_12430 IPR005759 Endonuclease III BED35_12430 IPR011257 DNA glycosylase BED35_12430 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal BED35_12505 IPR000086 NUDIX hydrolase domain BED35_12505 IPR015797 NUDIX hydrolase domain-like BED35_12505 IPR016913 Uncharacterised conserved protein UCP029215 BED35_12505 IPR020084 NUDIX hydrolase, conserved site BED35_12515 IPR024459 Protein of unknown function DUF1073 BED35_12520 IPR004921 Terminase, large subunit BED35_12530 IPR004929 Bacteriophage Rz lysis protein BED35_12535 IPR002196 Glycoside hydrolase, family 24 BED35_12535 IPR023346 Lysozyme-like domain BED35_12560 IPR008713 Bacteriophage lambda NinG BED35_12570 IPR008711 Recombinase NinB BED35_12570 IPR036619 BED35_12570 BED35_12580 IPR007539 Domain of unknown function DUF551 BED35_12595 IPR002611 IstB-like ATP-binding protein BED35_12595 IPR003593 AAA+ ATPase domain BED35_12595 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_12600 IPR006497 Bacteriophage lambda, GpO, N-terminal BED35_12600 IPR036388 BED35_12600 BED35_12610 IPR007933 Transcription activator CII BED35_12610 IPR010982 Lambda repressor-like, DNA-binding domain BED35_12615 IPR001387 Cro/C1-type helix-turn-helix domain BED35_12615 IPR010982 Lambda repressor-like, DNA-binding domain BED35_12620 IPR001387 Cro/C1-type helix-turn-helix domain BED35_12620 IPR010982 Lambda repressor-like, DNA-binding domain BED35_12620 IPR015927 Peptidase S24/S26A/S26B/S26C BED35_12620 IPR036286 BED35_12620 BED35_12630 IPR014960 Domain of unknown function DUF1828 BED35_12635 IPR024493 Protein of unknown function DUF2767 BED35_12675 IPR024432 Putative exodeoxyribonuclease 8, PDDEXK-like domain BED35_12680 IPR018330 RecT family BED35_12695 IPR001900 BED35_12695 BED35_12695 IPR003029 Ribosomal protein S1, RNA-binding domain BED35_12695 IPR004476 Ribonuclease II/ribonuclease R BED35_12695 IPR011129 Cold shock protein BED35_12695 IPR011804 Ribonuclease II BED35_12695 IPR012340 Nucleic acid-binding, OB-fold BED35_12695 IPR013223 Ribonuclease B, N-terminal OB domain BED35_12695 IPR022966 Ribonuclease II/R, conserved site BED35_12700 IPR003706 Carbon starvation protein CstA BED35_12700 IPR025299 CstA C-terminal domain BED35_12705 IPR007423 Protein of unknown function DUF466 BED35_12710 IPR001585 Transaldolase BED35_12710 IPR004731 Transaldolase 3A/3B BED35_12710 IPR013785 Aldolase-type TIM barrel BED35_12710 IPR018225 Transaldolase, active site BED35_12715 IPR001034 HTH DeoR N-terminal domain BED35_12715 IPR014036 DeoR C-terminal sensor domain BED35_12715 IPR018356 Transcription regulator, HTH DeoR-type, conserved site BED35_12715 IPR036388 BED35_12715 BED35_12715 IPR036390 BED35_12715 BED35_12715 IPR037171 BED35_12715 BED35_12720 IPR018680 Protein of unknown function DUF2164 BED35_12725 IPR001303 Class II aldolase/adducin N-terminal BED35_12725 IPR004661 L-ribulose-5-phosphate 4-epimerase BED35_12725 IPR036409 BED35_12725 BED35_12730 IPR008816 Glycine zipper 2TM domain BED35_12735 IPR001950 Translation initiation factor SUI1 BED35_12735 IPR005872 Archaeal/bacterial translation initiation factor SUI1 BED35_12735 IPR036877 BED35_12735 BED35_12740 IPR001754 Orotidine 5'-phosphate decarboxylase domain BED35_12740 IPR011060 Ribulose-phosphate binding barrel BED35_12740 IPR013785 Aldolase-type TIM barrel BED35_12740 IPR014732 Orotidine 5'-phosphate decarboxylase BED35_12740 IPR018089 Orotidine 5'-phosphate decarboxylase, active site BED35_12745 IPR010854 Domain of unknown function DUF1471 BED35_12745 IPR025543 Dodecin-like BED35_12745 IPR036275 BED35_12745 BED35_12750 IPR004711 Benzoate transporter BED35_12755 IPR001387 Cro/C1-type helix-turn-helix domain BED35_12755 IPR010982 Lambda repressor-like, DNA-binding domain BED35_12755 IPR011051 RmlC-like cupin domain BED35_12755 IPR013096 Cupin 2, conserved barrel BED35_12755 IPR014710 RmlC-like jelly roll fold BED35_12760 IPR010985 Ribbon-helix-helix BED35_12760 IPR013321 Arc-type ribbon-helix-helix BED35_12765 IPR011990 Tetratricopeptide-like helical domain BED35_12765 IPR019734 Tetratricopeptide repeat BED35_12765 IPR030865 BED35_12765 BED35_12770 IPR010445 Protein of unknown function DUF1049 BED35_12770 IPR032906 BED35_12770 BED35_12775 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BED35_12775 IPR036938 BED35_12775 BED35_12780 IPR000926 GTP cyclohydrolase II, RibA BED35_12780 IPR032677 BED35_12780 BED35_12780 IPR036144 BED35_12780 BED35_12785 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel BED35_12785 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha BED35_12785 IPR006249 Aconitate/iron regulatory protein 2 BED35_12785 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel BED35_12785 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 BED35_12785 IPR018136 Aconitase family, 4Fe-4S cluster binding site BED35_12785 IPR036008 BED35_12785 BED35_12795 IPR000847 Transcription regulator HTH, LysR BED35_12795 IPR005119 LysR, substrate-binding BED35_12795 IPR036388 BED35_12795 BED35_12795 IPR036390 BED35_12795 BED35_12800 IPR003601 DNA topoisomerase, type IA, domain 2 BED35_12800 IPR003602 DNA topoisomerase, type IA, DNA-binding domain BED35_12800 IPR005733 DNA topoisomerase I, bacterial-type BED35_12800 IPR006171 Toprim domain BED35_12800 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type BED35_12800 IPR013497 DNA topoisomerase, type IA, central BED35_12800 IPR013498 DNA topoisomerase, type IA, zn finger BED35_12800 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 BED35_12800 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 BED35_12800 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 BED35_12800 IPR023405 DNA topoisomerase, type IA, core domain BED35_12800 IPR023406 DNA topoisomerase, type IA, active site BED35_12800 IPR028612 DNA topoisomerase I, type IA BED35_12805 IPR019633 Protein of unknown function DUF2498 BED35_12805 IPR038191 BED35_12805 BED35_12810 IPR002142 Peptidase S49 BED35_12810 IPR013703 Peptidase S49, N-terminal proteobacteria BED35_12810 IPR029045 ClpP/crotonase-like domain BED35_12815 IPR002347 Glucose/ribitol dehydrogenase BED35_12815 IPR020904 Short-chain dehydrogenase/reductase, conserved site BED35_12815 IPR036291 BED35_12815 BED35_12820 IPR003724 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR BED35_12820 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain BED35_12820 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_12830 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F BED35_12830 IPR002942 RNA-binding S4 domain BED35_12830 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F BED35_12830 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site BED35_12830 IPR020103 Pseudouridine synthase, catalytic domain BED35_12830 IPR036986 BED35_12830 BED35_12835 IPR006070 YrdC-like domain BED35_12835 IPR017945 DHBP synthase RibB-like alpha/beta domain BED35_12840 IPR003141 Polymerase/histidinol phosphatase, N-terminal BED35_12840 IPR004013 PHP, C-terminal BED35_12840 IPR016195 Polymerase/histidinol phosphatase-like BED35_12845 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial BED35_12845 IPR005801 ADC synthase BED35_12845 IPR006805 Anthranilate synthase component I, N-terminal BED35_12845 IPR015890 Chorismate binding, C-terminal BED35_12845 IPR019999 Anthranilate synthase component I - like BED35_12850 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain BED35_12850 IPR017926 Glutamine amidotransferase BED35_12850 IPR029062 Class I glutamine amidotransferase-like BED35_12855 IPR000312 Glycosyl transferase, family 3 BED35_12855 IPR005940 Anthranilate phosphoribosyl transferase BED35_12855 IPR017459 Glycosyl transferase family 3, N-terminal domain BED35_12855 IPR035902 BED35_12855 BED35_12855 IPR036320 BED35_12855 BED35_12860 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) like domain BED35_12860 IPR001468 Indole-3-glycerol phosphate synthase, conserved site BED35_12860 IPR011060 Ribulose-phosphate binding barrel BED35_12860 IPR013785 Aldolase-type TIM barrel BED35_12860 IPR013798 Indole-3-glycerol phosphate synthase BED35_12865 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme BED35_12865 IPR006653 Tryptophan synthase, beta chain, conserved site BED35_12865 IPR006654 Tryptophan synthase, beta chain BED35_12865 IPR023026 Tryptophan synthase beta chain/beta chain-like BED35_12865 IPR036052 BED35_12865 BED35_12870 IPR002028 Tryptophan synthase, alpha chain BED35_12870 IPR011060 Ribulose-phosphate binding barrel BED35_12870 IPR013785 Aldolase-type TIM barrel BED35_12870 IPR018204 Tryptophan synthase, alpha chain, active site BED35_12875 IPR007055 BON domain BED35_12875 IPR014004 Transport-associated and nodulation domain, bacteria BED35_12880 IPR000758 Virulence-related outer membrane protein BED35_12880 IPR005618 Outer membrane protein, OmpW BED35_12880 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel BED35_12885 IPR005358 Putative zinc- or iron-chelating domain containing protein BED35_12890 IPR009627 Uncharacterised protein family UPF0259 BED35_12895 IPR002645 STAS domain BED35_12895 IPR011547 Sulphate transporter BED35_12895 IPR036513 BED35_12895 BED35_12900 IPR006008 Intracellular septation protein A BED35_12905 IPR006683 Thioesterase superfamily BED35_12905 IPR029069 HotDog domain BED35_12910 IPR003538 Gram-negative bacterial TonB protein BED35_12910 IPR006260 TonB, C-terminal BED35_12910 IPR037682 BED35_12910 BED35_12915 IPR005545 YCII-related BED35_12915 IPR011008 Dimeric alpha-beta barrel BED35_12925 IPR001633 EAL domain BED35_12925 IPR035919 BED35_12925 BED35_12930 IPR001736 Phospholipase D/Transphosphatidylase BED35_12930 IPR022924 Cardiolipin synthase BED35_12930 IPR025202 Phospholipase D-like domain BED35_12930 IPR027379 Cardiolipin synthase N-terminal BED35_12930 IPR030840 BED35_12930 BED35_12935 IPR007376 dsDNA mimic, putative BED35_12935 IPR036763 BED35_12935 BED35_12940 IPR003439 ABC transporter-like BED35_12940 IPR003593 AAA+ ATPase domain BED35_12940 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal BED35_12940 IPR017871 ABC transporter, conserved site BED35_12940 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_12945 IPR003439 ABC transporter-like BED35_12945 IPR003593 AAA+ ATPase domain BED35_12945 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal BED35_12945 IPR017871 ABC transporter, conserved site BED35_12945 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_12950 IPR000515 MetI-like domain BED35_12950 IPR025966 Oligopeptide transport permease C-like, N-terminal domain BED35_12950 IPR035906 BED35_12950 BED35_12955 IPR000515 MetI-like domain BED35_12955 IPR035906 BED35_12955 BED35_12960 IPR000914 Bacterial extracellular solute-binding protein, family 5 BED35_12960 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site BED35_12960 IPR030678 BED35_12960 BED35_12965 IPR000914 Bacterial extracellular solute-binding protein, family 5 BED35_12965 IPR030678 BED35_12965 BED35_12970 IPR002771 Multiple antibiotic resistance (MarC)-related BED35_12975 IPR001670 Alcohol dehydrogenase, iron-type BED35_12975 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase BED35_12975 IPR015590 Aldehyde dehydrogenase domain BED35_12975 IPR016161 Aldehyde/histidinol dehydrogenase BED35_12975 IPR016162 Aldehyde dehydrogenase, N-terminal BED35_12975 IPR016163 Aldehyde dehydrogenase, C-terminal BED35_12975 IPR018211 Alcohol dehydrogenase, iron-type, conserved site BED35_12980 IPR001267 Thymidine kinase BED35_12980 IPR020633 Thymidine kinase, conserved site BED35_12980 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_12990 IPR001801 Histone-like protein H-NS BED35_12990 IPR027444 Histone-like protein H-NS, C-terminal domain BED35_12990 IPR027454 Histone-like protein H-NS family, oligomerisation domain BED35_12990 IPR037150 BED35_12990 BED35_12995 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal BED35_12995 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like BED35_12995 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation BED35_12995 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal BED35_12995 IPR017476 UDP-glucose/GDP-mannose dehydrogenase BED35_12995 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type BED35_12995 IPR036220 BED35_12995 BED35_12995 IPR036291 BED35_12995 BED35_13000 IPR001789 Signal transduction response regulator, receiver domain BED35_13000 IPR011006 CheY-like superfamily BED35_13000 IPR028616 Regulator of RpoS BED35_13000 IPR036457 BED35_13000 BED35_13005 IPR002641 Patatin/Phospholipase A2-related BED35_13005 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase BED35_13015 IPR004027 SEC-C motif BED35_13015 IPR023006 Uncharacterised protein family UPF0225 BED35_13015 IPR032710 BED35_13015 BED35_13020 IPR002376 Formyl transferase, N-terminal BED35_13020 IPR002912 ACT domain BED35_13020 IPR004810 Formyltetrahydrofolate deformylase BED35_13020 IPR036477 BED35_13020 BED35_13035 IPR000847 Transcription regulator HTH, LysR BED35_13035 IPR036388 BED35_13035 BED35_13035 IPR036390 BED35_13035 BED35_13040 IPR004808 AP endonuclease 1 BED35_13040 IPR005135 Endonuclease/exonuclease/phosphatase BED35_13040 IPR020847 AP endonuclease 1, binding site BED35_13040 IPR020848 AP endonuclease 1, conserved site BED35_13040 IPR036691 BED35_13040 BED35_13045 IPR000086 NUDIX hydrolase domain BED35_13045 IPR015797 NUDIX hydrolase domain-like BED35_13045 IPR020084 NUDIX hydrolase, conserved site BED35_13045 IPR020476 NUDIX hydrolase BED35_13050 IPR009971 Protein of unknown function DUF1496 BED35_13055 IPR003601 DNA topoisomerase, type IA, domain 2 BED35_13055 IPR003602 DNA topoisomerase, type IA, DNA-binding domain BED35_13055 IPR005738 DNA topoisomerase III BED35_13055 IPR006171 Toprim domain BED35_13055 IPR013497 DNA topoisomerase, type IA, central BED35_13055 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 BED35_13055 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 BED35_13055 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 BED35_13055 IPR023405 DNA topoisomerase, type IA, core domain BED35_13055 IPR023406 DNA topoisomerase, type IA, active site BED35_13060 IPR004536 Selenide water dikinase BED35_13060 IPR010918 AIR synthase-related protein, C-terminal domain BED35_13060 IPR016188 PurM, N-terminal-like BED35_13060 IPR023061 Selenide, water dikinase, class I BED35_13060 IPR036676 BED35_13060 BED35_13060 IPR036921 BED35_13060 BED35_13065 IPR000415 Nitroreductase-like BED35_13065 IPR026021 Putative NAD(P)H nitroreductase YdjA-like BED35_13065 IPR029479 Nitroreductase BED35_13070 IPR002142 Peptidase S49 BED35_13070 IPR004634 Peptidase S49, protease IV BED35_13070 IPR004635 Peptidase S49, SppA BED35_13070 IPR029045 ClpP/crotonase-like domain BED35_13075 IPR006033 L-asparaginase, type I BED35_13075 IPR006034 Asparaginase/glutaminase BED35_13075 IPR020827 Asparaginase/glutaminase, active site 1 BED35_13075 IPR027473 L-asparaginase, C-terminal domain BED35_13075 IPR027474 L-asparaginase, N-terminal BED35_13075 IPR027475 Asparaginase/glutaminase, active site 2 BED35_13075 IPR036152 BED35_13075 BED35_13075 IPR037152 BED35_13075 BED35_13080 IPR000868 Isochorismatase-like BED35_13080 IPR036380 BED35_13080 BED35_13095 IPR002579 Peptide methionine sulphoxide reductase MrsB BED35_13095 IPR011057 Mss4-like BED35_13100 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I BED35_13100 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain BED35_13100 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain BED35_13100 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site BED35_13100 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family BED35_13100 IPR036291 BED35_13100 BED35_13105 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase BED35_13105 IPR011013 Galactose mutarotase-like domain BED35_13105 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup BED35_13105 IPR025532 Glucose-6-phosphate 1-epimerase BED35_13110 IPR010583 MltA-interacting MipA BED35_13115 IPR010650 PrkA C-terminal domain BED35_13115 IPR013153 PrkA AAA domain BED35_13115 IPR016230 Serine-protein kinase, PrkA BED35_13115 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_13120 IPR006698 Thermus phage phiYS40, Orf56 BED35_13125 IPR000620 Drug/metabolite transporter BED35_13135 IPR000847 Transcription regulator HTH, LysR BED35_13135 IPR005119 LysR, substrate-binding BED35_13135 IPR036388 BED35_13135 BED35_13135 IPR036390 BED35_13135 BED35_13140 IPR003829 Pirin, N-terminal domain BED35_13140 IPR008778 Pirin, C-terminal domain BED35_13140 IPR011051 RmlC-like cupin domain BED35_13140 IPR012093 Pirin BED35_13140 IPR014710 RmlC-like jelly roll fold BED35_13145 IPR000014 PAS domain BED35_13145 IPR000160 GGDEF domain BED35_13145 IPR001633 EAL domain BED35_13145 IPR003018 GAF domain BED35_13145 IPR012226 Oxygen sensor diguanylate cyclase/c-di-GMP phosphodiesterase BED35_13145 IPR013655 PAS fold-3 BED35_13145 IPR029016 GAF domain-like BED35_13145 IPR029787 Nucleotide cyclase BED35_13145 IPR035919 BED35_13145 BED35_13145 IPR035965 BED35_13145 BED35_13155 IPR000821 Alanine racemase BED35_13155 IPR001608 Alanine racemase, N-terminal BED35_13155 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal BED35_13155 IPR011079 Alanine racemase, C-terminal BED35_13155 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site BED35_13155 IPR029066 PLP-binding barrel BED35_13160 IPR006076 FAD dependent oxidoreductase BED35_13160 IPR023080 D-amino acid dehydrogenase small subunit, DadA BED35_13160 IPR036188 BED35_13160 BED35_13165 IPR007390 Sporulation stage V, protein R BED35_13170 IPR000524 Transcription regulator HTH, GntR BED35_13170 IPR008920 Transcription regulator FadR/GntR, C-terminal BED35_13170 IPR014178 Fatty acid response transcription factor FadR BED35_13170 IPR028374 FadR, C-terminal domain BED35_13170 IPR036388 BED35_13170 BED35_13170 IPR036390 BED35_13170 BED35_13175 IPR004671 Na+/H+ antiporter NhaB BED35_13180 IPR003752 Disulphide bond formation protein DsbB/BdbC BED35_13180 IPR022920 Disulphide bond formation protein DsbB BED35_13180 IPR023380 Disulphide bond formation protein DsbB-like domain BED35_13185 IPR037157 BED35_13185 BED35_13200 IPR005627 Copper homeostasis protein CutC BED35_13200 IPR023648 Copper homeostasis CutC domain BED35_13200 IPR036822 BED35_13200 BED35_13205 IPR010393 Protein of unknown function DUF991 BED35_13205 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BED35_13210 IPR001278 Arginine-tRNA ligase BED35_13210 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site BED35_13210 IPR005148 Arginyl tRNA synthetase N-terminal domain BED35_13210 IPR008909 DALR anticodon binding BED35_13210 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding BED35_13210 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED35_13210 IPR035684 BED35_13210 BED35_13210 IPR036695 BED35_13210 BED35_13215 IPR008490 Transposase InsH, N-terminal BED35_13215 IPR025668 Transposase DDE domain BED35_13220 IPR003714 PhoH-like protein BED35_13220 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_13230 IPR000182 GNAT domain BED35_13230 IPR016181 Acyl-CoA N-acyltransferase BED35_13235 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD BED35_13240 IPR001173 Glycosyltransferase 2-like BED35_13240 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA BED35_13240 IPR029044 Nucleotide-diphospho-sugar transferases BED35_13255 IPR000587 Creatinase, N-terminal BED35_13255 IPR000994 Peptidase M24, structural domain BED35_13255 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal BED35_13255 IPR036005 BED35_13255 BED35_13265 IPR009000 Translation protein, beta-barrel domain BED35_13265 IPR012947 Threonyl/alanyl tRNA synthetase, SAD BED35_13265 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain BED35_13265 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal BED35_13275 IPR004537 Tellurite resistance methyltransferase, TehB BED35_13275 IPR014431 Tellurite resistance methyltransferase, TehB type-2 BED35_13275 IPR014710 RmlC-like jelly roll fold BED35_13275 IPR015392 Domain of unknown function DUF1971 BED35_13275 IPR015985 Tellurite resistance methyltransferase TehB-like domain BED35_13275 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BED35_13280 IPR009056 Cytochrome c-like domain BED35_13280 IPR036909 BED35_13280 BED35_13285 IPR013740 Redoxin BED35_13285 IPR036249 BED35_13285 BED35_13290 IPR003439 ABC transporter-like BED35_13290 IPR003593 AAA+ ATPase domain BED35_13290 IPR017871 ABC transporter, conserved site BED35_13290 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_13300 IPR003838 Permease FtsX-like BED35_13305 IPR007029 YHS domain BED35_13305 IPR018758 Domain of unknown function DUF2318, membrane BED35_13310 IPR018470 Periplasmic metal-binding protein Tp34-type BED35_13310 IPR038482 BED35_13310 BED35_13315 IPR004923 Iron permease FTR1/Fip1/EfeU BED35_13330 IPR012338 Beta-lactamase/transpeptidase-like BED35_13330 IPR015868 Glutaminase BED35_13335 IPR013022 Xylose isomerase-like, TIM barrel domain BED35_13335 IPR026040 Hydroxypyruvate isomerase-like BED35_13335 IPR036237 BED35_13335 BED35_13340 IPR001303 Class II aldolase/adducin N-terminal BED35_13340 IPR036409 BED35_13340 BED35_13345 IPR010737 Protein of unknown function, DUF1537 BED35_13345 IPR031475 BED35_13345 BED35_13345 IPR037051 BED35_13345 BED35_13350 IPR001034 HTH DeoR N-terminal domain BED35_13350 IPR014036 DeoR C-terminal sensor domain BED35_13350 IPR036388 BED35_13350 BED35_13350 IPR036390 BED35_13350 BED35_13350 IPR037171 BED35_13350 BED35_13355 IPR003594 Histidine kinase-like ATPase, C-terminal domain BED35_13355 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BED35_13355 IPR013767 PAS fold BED35_13355 IPR029151 Periplasmic sensor domain-like BED35_13355 IPR033463 BED35_13355 BED35_13355 IPR035965 BED35_13355 BED35_13355 IPR036890 BED35_13355 BED35_13355 IPR039506 BED35_13355 BED35_13360 IPR001789 Signal transduction response regulator, receiver domain BED35_13360 IPR011006 CheY-like superfamily BED35_13360 IPR024187 Signal transduction response regulator, citrate/malate metabolism BED35_13365 IPR004679 2-hydroxycarboxylate transporter BED35_13370 IPR002293 Amino acid/polyamine transporter I BED35_13370 IPR004840 Amino acid permease, conserved site BED35_13370 IPR004841 Amino acid permease/ SLC12A domain BED35_13375 IPR007438 Protein of unknown function DUF488 BED35_13380 IPR000600 ROK BED35_13380 IPR036388 BED35_13380 BED35_13380 IPR036390 BED35_13380 BED35_13385 IPR011701 Major facilitator superfamily BED35_13385 IPR036259 BED35_13385 BED35_13390 IPR000150 Cof protein BED35_13390 IPR006379 HAD-superfamily hydrolase, subfamily IIB BED35_13390 IPR023214 HAD-like domain BED35_13390 IPR036412 BED35_13390 BED35_13400 IPR001207 Transposase, mutator type BED35_13405 IPR013217 Methyltransferase type 12 BED35_13405 IPR016584 S-adenosyl-L-methionine dependent methyltransferase, YbcY, predicted BED35_13405 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BED35_13415 IPR001207 Transposase, mutator type BED35_13425 IPR001248 Permease, cytosine/purines, uracil, thiamine, allantoin BED35_13425 IPR038271 BED35_13425 BED35_13430 IPR013656 PAS fold-4 BED35_13430 IPR016032 Signal transduction response regulator, C-terminal effector BED35_13430 IPR036388 BED35_13430 BED35_13445 IPR009734 Myoviridae, GpU BED35_13445 IPR016912 Bacteriophage P2, GpU BED35_13460 IPR002104 Integrase, catalytic BED35_13460 IPR011010 DNA breaking-rejoining enzyme, catalytic core BED35_13460 IPR013762 Integrase-like, catalytic core BED35_13465 IPR019648 Protein of unknown function DUF2511 BED35_13470 IPR008457 Copper resistance D BED35_13475 IPR007348 CopC domain BED35_13475 IPR014756 Immunoglobulin E-set BED35_13480 IPR008331 Ferritin/DPS protein domain BED35_13480 IPR009078 Ferritin-like superfamily BED35_13480 IPR012347 Ferritin-related BED35_13485 IPR009052 DNA polymerase III-theta, bacterial BED35_13485 IPR036745 BED35_13485 BED35_13490 IPR000073 Alpha/beta hydrolase fold-1 BED35_13490 IPR002410 Peptidase S33 BED35_13490 IPR005944 Proline iminopeptidase BED35_13490 IPR029058 Alpha/Beta hydrolase fold BED35_13495 IPR012337 Ribonuclease H-like domain BED35_13495 IPR013520 Exonuclease, RNase T/DNA polymerase III BED35_13495 IPR036397 BED35_13495 BED35_13500 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain BED35_13500 IPR002470 Peptidase S9A, prolyl oligopeptidase BED35_13500 IPR023302 Peptidase S9A, N-terminal domain BED35_13500 IPR029058 Alpha/Beta hydrolase fold BED35_13505 IPR025603 YebF/Colicin-M immunity protein BED35_13505 IPR038703 BED35_13505 BED35_13510 IPR007374 ASCH domain BED35_13510 IPR008314 Uncharacterised conserved protein UCP029143 BED35_13510 IPR015947 PUA-like domain BED35_13515 IPR009813 Uncharacterised protein family YebG BED35_13515 IPR038627 BED35_13515 BED35_13520 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site BED35_13520 IPR001650 Helicase, C-terminal BED35_13520 IPR005580 DbpA, RNA-binding BED35_13520 IPR011545 DEAD/DEAH box helicase domain BED35_13520 IPR012677 Nucleotide-binding, alpha-beta plait BED35_13520 IPR014001 Helicase, superfamily 1/2, ATP-binding domain BED35_13520 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_13520 IPR028619 ATP-dependent RNA helicase DbpA BED35_13525 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type BED35_13525 IPR005862 Phosphoribosylglycinamide formyltransferase 2 BED35_13525 IPR011054 Rudiment single hybrid motif BED35_13525 IPR013815 ATP-grasp fold, subdomain 1 BED35_13525 IPR016185 Pre-ATP-grasp domain BED35_13530 IPR005371 Uncharacterised protein family UPF0181 BED35_13535 IPR005801 ADC synthase BED35_13535 IPR005802 Para-aminobenzoate synthase, component I BED35_13535 IPR006805 Anthranilate synthase component I, N-terminal BED35_13535 IPR015890 Chorismate binding, C-terminal BED35_13535 IPR019999 Anthranilate synthase component I - like BED35_13540 IPR000059 NUDIX hydrolase, NudL, conserved site BED35_13540 IPR000086 NUDIX hydrolase domain BED35_13540 IPR015797 NUDIX hydrolase domain-like BED35_13545 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form BED35_13545 IPR005130 Serine dehydratase-like, alpha subunit BED35_13545 IPR005131 Serine dehydratase beta chain BED35_13545 IPR029009 Allosteric substrate binding domain BED35_13550 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED35_13550 IPR003346 Transposase, IS116/IS110/IS902 BED35_13555 IPR000644 CBS domain BED35_13555 IPR005170 Transporter-associated domain BED35_13555 IPR005496 Integral membrane protein TerC BED35_13555 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 BED35_13555 IPR036318 BED35_13555 BED35_13560 IPR004701 Phosphotransferase system, mannose-type IIA component BED35_13560 IPR004720 Phosphotransferase system, sorbose subfamily IIB component BED35_13560 IPR013789 Phosphotransferase system, mannose family IIA component BED35_13560 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup BED35_13560 IPR036662 BED35_13560 BED35_13560 IPR036667 BED35_13560 BED35_13565 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit BED35_13570 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component BED35_13575 IPR009328 Protein of unknown function DUF986 BED35_13580 IPR003810 Domain of unknown function DUF204 BED35_13580 IPR022929 Putative manganese efflux pump MntP BED35_13585 IPR000531 TonB-dependent receptor, beta-barrel BED35_13585 IPR010105 TonB-dependent siderophore receptor BED35_13585 IPR010916 TonB box, conserved site BED35_13585 IPR010917 TonB-dependent receptor, conserved site BED35_13585 IPR012910 TonB-dependent receptor, plug BED35_13585 IPR036942 BED35_13585 BED35_13585 IPR037066 BED35_13585 BED35_13590 IPR000014 PAS domain BED35_13590 IPR000160 GGDEF domain BED35_13590 IPR001610 PAC motif BED35_13590 IPR013656 PAS fold-4 BED35_13590 IPR013767 PAS fold BED35_13590 IPR029787 Nucleotide cyclase BED35_13590 IPR035965 BED35_13590 BED35_13600 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted BED35_13600 IPR025714 Methyltransferase domain BED35_13600 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BED35_13605 IPR001460 Penicillin-binding protein, transpeptidase BED35_13605 IPR005311 Penicillin-binding protein, dimerisation domain BED35_13605 IPR012338 Beta-lactamase/transpeptidase-like BED35_13605 IPR036138 BED35_13605 BED35_13605 IPR037532 BED35_13605 BED35_13610 IPR003730 Multi-copper polyphenol oxidoreductase, laccase BED35_13610 IPR011324 Cytotoxic necrotizing factor-like, catalytic BED35_13610 IPR038371 BED35_13610 BED35_13615 IPR002059 Cold-shock protein, DNA-binding BED35_13615 IPR011129 Cold shock protein BED35_13615 IPR012156 Cold shock, CspA BED35_13615 IPR012340 Nucleic acid-binding, OB-fold BED35_13615 IPR019844 Cold-shock conserved site BED35_13620 IPR019672 Protein of unknown function DUF2627 BED35_13625 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP BED35_13625 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel BED35_13635 IPR025135 Protein of unknown function DUF4060 BED35_13640 IPR019701 Bacteriophage P22, NinX BED35_13645 IPR025594 YebO-like protein BED35_13650 IPR025611 YobH-like protein BED35_13655 IPR020262 Uncharacterised protein family YecJ BED35_13660 IPR009057 Homeodomain-like BED35_13660 IPR018060 DNA binding HTH domain, AraC-type BED35_13660 IPR018062 HTH domain AraC-type, conserved site BED35_13660 IPR020449 Transcription regulator HTH, AraC- type BED35_13670 IPR002293 Amino acid/polyamine transporter I BED35_13675 IPR000182 GNAT domain BED35_13675 IPR016181 Acyl-CoA N-acyltransferase BED35_13680 IPR003439 ABC transporter-like BED35_13680 IPR003593 AAA+ ATPase domain BED35_13680 IPR011527 ABC transporter type 1, transmembrane domain BED35_13680 IPR017871 ABC transporter, conserved site BED35_13680 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_13680 IPR036640 BED35_13680 BED35_13685 IPR000687 RIO kinase BED35_13685 IPR011009 Protein kinase-like domain BED35_13685 IPR018935 RIO kinase, conserved site BED35_13690 IPR005135 Endonuclease/exonuclease/phosphatase BED35_13690 IPR036691 BED35_13690 BED35_13695 IPR003558 Cytolethal distending toxin A/C BED35_13695 IPR035992 BED35_13695 BED35_13700 IPR000014 PAS domain BED35_13700 IPR000160 GGDEF domain BED35_13700 IPR001610 PAC motif BED35_13700 IPR013655 PAS fold-3 BED35_13700 IPR029787 Nucleotide cyclase BED35_13700 IPR035965 BED35_13700 BED35_13710 IPR010486 HNS-dependent expression A/B BED35_13710 IPR028623 HNS-dependent expression B BED35_13710 IPR038303 BED35_13710 BED35_13715 IPR009739 Protein of unknown function DUF1311 BED35_13720 IPR009057 Homeodomain-like BED35_13720 IPR018060 DNA binding HTH domain, AraC-type BED35_13720 IPR020449 Transcription regulator HTH, AraC- type BED35_13725 IPR000620 Drug/metabolite transporter BED35_13735 IPR005545 YCII-related BED35_13735 IPR011008 Dimeric alpha-beta barrel BED35_13740 IPR002577 Helix-turn-helix, HxlR type BED35_13740 IPR036388 BED35_13740 BED35_13740 IPR036390 BED35_13740 BED35_13745 IPR016040 NAD(P)-binding domain BED35_13745 IPR036291 BED35_13745 BED35_13750 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme BED35_13750 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase BED35_13750 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BED35_13750 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 BED35_13750 IPR015424 Pyridoxal phosphate-dependent transferase BED35_13760 IPR006197 Peptidase S24, LexA-like BED35_13760 IPR015927 Peptidase S24/S26A/S26B/S26C BED35_13760 IPR036286 BED35_13760 BED35_13765 IPR001126 DNA-repair protein, UmuC-like BED35_13765 IPR017961 DNA polymerase, Y-family, little finger domain BED35_13765 IPR024728 DNA polymerase type-Y, HhH motif BED35_13765 IPR025188 Domain of unknown function DUF4113 BED35_13765 IPR036775 BED35_13765 BED35_13770 IPR000014 PAS domain BED35_13770 IPR001610 PAC motif BED35_13770 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BED35_13770 IPR004090 Chemotaxis methyl-accepting receptor BED35_13770 IPR013655 PAS fold-3 BED35_13770 IPR035965 BED35_13770 BED35_13780 IPR000843 Transcription regulator HTH, LacI BED35_13780 IPR001761 Periplasmic binding protein/LacI sugar binding domain BED35_13780 IPR010982 Lambda repressor-like, DNA-binding domain BED35_13780 IPR028082 Periplasmic binding protein-like I BED35_13785 IPR001362 Glycoside hydrolase, family 32 BED35_13785 IPR006232 Sucrose-6-phosphate hydrolase BED35_13785 IPR013148 Glycosyl hydrolase family 32, N-terminal BED35_13785 IPR013189 Glycosyl hydrolase family 32, C-terminal BED35_13785 IPR013320 Concanavalin A-like lectin/glucanase, subgroup BED35_13785 IPR018053 Glycoside hydrolase, family 32, active site BED35_13785 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain BED35_13790 IPR000576 LacY/RafB permease family BED35_13790 IPR018457 LacY/RafB permease family, conserved site BED35_13790 IPR036259 BED35_13790 BED35_13795 IPR007016 O-antigen ligase-related BED35_13800 IPR001173 Glycosyltransferase 2-like BED35_13800 IPR029044 Nucleotide-diphospho-sugar transferases BED35_13805 IPR024084 Isopropylmalate dehydrogenase-like domain BED35_13810 IPR018707 Protein of unknown function DUF2219 BED35_13810 IPR037107 BED35_13810 BED35_13835 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic BED35_13835 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site BED35_13835 IPR024084 Isopropylmalate dehydrogenase-like domain BED35_13840 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F BED35_13840 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F BED35_13840 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site BED35_13840 IPR020103 Pseudouridine synthase, catalytic domain BED35_13845 IPR000086 NUDIX hydrolase domain BED35_13845 IPR015797 NUDIX hydrolase domain-like BED35_13845 IPR020084 NUDIX hydrolase, conserved site BED35_13845 IPR020476 NUDIX hydrolase BED35_13850 IPR004506 tRNA-specific 2-thiouridylase BED35_13850 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED35_13850 IPR023382 Adenine nucleotide alpha hydrolase-like domains BED35_13855 IPR007451 Uncharacterised protein family UPF0274 BED35_13855 IPR035932 BED35_13855 BED35_13860 IPR000362 Fumarate lyase family BED35_13860 IPR004769 Adenylosuccinate lyase BED35_13860 IPR008948 L-Aspartase-like BED35_13860 IPR013539 Adenylosuccinate lyase PurB, C-terminal BED35_13860 IPR020557 Fumarate lyase, conserved site BED35_13860 IPR022761 Fumarate lyase, N-terminal BED35_13860 IPR024083 Fumarase/histidase, N-terminal BED35_13865 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel BED35_13865 IPR027385 Outer membrane protein beta-barrel BED35_13870 IPR001789 Signal transduction response regulator, receiver domain BED35_13870 IPR001867 Signal transduction response regulator, C-terminal BED35_13870 IPR011006 CheY-like superfamily BED35_13870 IPR036388 BED35_13870 BED35_13875 IPR003594 Histidine kinase-like ATPase, C-terminal domain BED35_13875 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain BED35_13875 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BED35_13875 IPR015014 PhoQ Sensor BED35_13875 IPR036097 BED35_13875 BED35_13875 IPR036890 BED35_13875 BED35_13875 IPR038429 BED35_13875 BED35_13885 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site BED35_13885 IPR002933 Peptidase M20 BED35_13885 IPR010161 Peptidase M20B, tripeptide aminopeptidase BED35_13885 IPR011650 Peptidase M20, dimerisation domain BED35_13885 IPR036264 BED35_13885 BED35_13890 IPR003000 Sirtuin family BED35_13890 IPR026591 Sirtuin family, catalytic core small domain BED35_13890 IPR027546 Sirtuin, class III BED35_13890 IPR029035 DHS-like NAD/FAD-binding domain BED35_13900 IPR003838 Permease FtsX-like BED35_13900 IPR011925 Lipoprotein releasing system, transmembrane protein, LolC/E family BED35_13900 IPR011926 Lipoprotein releasing system, transmembrane protein LolE BED35_13900 IPR025857 MacB-like periplasmic core domain BED35_13905 IPR003439 ABC transporter-like BED35_13905 IPR003593 AAA+ ATPase domain BED35_13905 IPR011924 Lipoprotein releasing system, ATP-binding protein BED35_13905 IPR017871 ABC transporter, conserved site BED35_13905 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_13910 IPR003838 Permease FtsX-like BED35_13910 IPR011925 Lipoprotein releasing system, transmembrane protein, LolC/E family BED35_13910 IPR025857 MacB-like periplasmic core domain BED35_13915 IPR001650 Helicase, C-terminal BED35_13915 IPR003711 CarD-like/TRCF domain BED35_13915 IPR004576 Transcription-repair coupling factor BED35_13915 IPR005118 Transcription-repair-coupling factor, C-terminal domain BED35_13915 IPR011545 DEAD/DEAH box helicase domain BED35_13915 IPR014001 Helicase, superfamily 1/2, ATP-binding domain BED35_13915 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_13915 IPR036101 BED35_13915 BED35_13915 IPR037235 BED35_13915 BED35_13920 IPR008816 Glycine zipper 2TM domain BED35_13925 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain BED35_13925 IPR036188 BED35_13925 BED35_13930 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA BED35_13930 IPR022987 Uncharacterised protein family UPF0227 BED35_13930 IPR029058 Alpha/Beta hydrolase fold BED35_13935 IPR001764 Glycoside hydrolase, family 3, N-terminal BED35_13935 IPR017853 Glycoside hydrolase, superfamily BED35_13935 IPR019800 Glycoside hydrolase, family 3, active site BED35_13935 IPR022956 Beta-hexosaminidase, bacterial BED35_13935 IPR036962 BED35_13935 BED35_13940 IPR002575 Aminoglycoside phosphotransferase BED35_13940 IPR011009 Protein kinase-like domain BED35_13940 IPR014093 Thiamine kinase BED35_13945 IPR014094 Penicillin-binding protein activator LpoB BED35_13950 IPR010824 Protein of unknown function DUF1425 BED35_13950 IPR038483 BED35_13950 BED35_13955 IPR001310 Histidine triad (HIT) protein BED35_13955 IPR019808 Histidine triad, conserved site BED35_13955 IPR036265 BED35_13955 BED35_13960 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal BED35_13960 IPR036291 BED35_13960 BED35_13965 IPR000914 Bacterial extracellular solute-binding protein, family 5 BED35_13965 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain BED35_13965 IPR036388 BED35_13965 BED35_13965 IPR036390 BED35_13965 BED35_13970 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site BED35_13970 IPR007197 Radical SAM BED35_13970 IPR013785 Aldolase-type TIM barrel BED35_13970 IPR030989 BED35_13970 BED35_13975 IPR003997 RTX secretion protein D, Gram-negative bacteria BED35_13980 IPR003439 ABC transporter-like BED35_13980 IPR003593 AAA+ ATPase domain BED35_13980 IPR005074 Peptidase C39, bacteriocin processing BED35_13980 IPR011527 ABC transporter type 1, transmembrane domain BED35_13980 IPR017871 ABC transporter, conserved site BED35_13980 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_13980 IPR036640 BED35_13980 BED35_13985 IPR001969 Aspartic peptidase, active site BED35_13985 IPR021109 Aspartic peptidase domain BED35_13990 IPR001996 Phosphotransferase system, IIB component, type 1 BED35_13990 IPR003352 Phosphotransferase system, EIIC BED35_13990 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component BED35_13990 IPR011299 PTS system glucose-specific IIBC component BED35_13990 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site BED35_13990 IPR036878 BED35_13990 BED35_13995 IPR001130 TatD family BED35_13995 IPR015991 Uncharacterised deoxyribonuclease TatD-type BED35_13995 IPR018228 Deoxyribonuclease, TatD-related, conserved site BED35_13995 IPR032466 BED35_13995 BED35_14000 IPR004622 DNA polymerase III, delta prime subunit BED35_14000 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal BED35_14000 IPR015199 DNA polymerase III, delta subunit, C-terminal BED35_14000 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_14005 IPR018094 Thymidylate kinase BED35_14005 IPR018095 Thymidylate kinase, conserved site BED35_14005 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_14005 IPR039430 BED35_14005 BED35_14010 IPR003770 Uncharacterised protein family UPF0755, YceG-like BED35_14015 IPR001544 Aminotransferase, class IV BED35_14015 IPR017824 Aminodeoxychorismate lyase, class IV BED35_14015 IPR018300 Aminotransferase, class IV, conserved site BED35_14015 IPR036038 BED35_14015 BED35_14020 IPR014030 Beta-ketoacyl synthase, N-terminal BED35_14020 IPR014031 Beta-ketoacyl synthase, C-terminal BED35_14020 IPR016039 Thiolase-like BED35_14020 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 BED35_14020 IPR018201 Beta-ketoacyl synthase, active site BED35_14020 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BED35_14025 IPR003231 Acyl carrier protein (ACP) BED35_14025 IPR006162 Phosphopantetheine attachment site BED35_14025 IPR009081 Acyl carrier protein-like BED35_14025 IPR036736 BED35_14025 BED35_14030 IPR002347 Glucose/ribitol dehydrogenase BED35_14030 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase BED35_14030 IPR020904 Short-chain dehydrogenase/reductase, conserved site BED35_14030 IPR036291 BED35_14030 BED35_14035 IPR001227 Acyl transferase domain BED35_14035 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type BED35_14035 IPR014043 Acyl transferase BED35_14035 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase BED35_14035 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding BED35_14035 IPR020801 Polyketide synthase, acyl transferase domain BED35_14035 IPR024925 Malonyl CoA-acyl carrier protein transacylase BED35_14040 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 BED35_14040 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal BED35_14040 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BED35_14040 IPR016039 Thiolase-like BED35_14045 IPR003664 Fatty acid synthesis PlsX protein BED35_14045 IPR012281 Phospholipid biosynthesis protein, PlsX-like BED35_14050 IPR002677 Ribosomal protein L32p BED35_14050 IPR011332 Zinc-binding ribosomal protein BED35_14055 IPR003772 Protein of unknown function DUF177 BED35_14060 IPR003697 Maf-like protein BED35_14060 IPR029001 Inosine triphosphate pyrophosphatase-like BED35_14065 IPR002942 RNA-binding S4 domain BED35_14065 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F BED35_14065 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site BED35_14065 IPR006225 Pseudouridine synthase, RluC/RluD BED35_14065 IPR020103 Pseudouridine synthase, catalytic domain BED35_14065 IPR036986 BED35_14065 BED35_14070 IPR003029 Ribosomal protein S1, RNA-binding domain BED35_14070 IPR004659 Ribonuclease E/G BED35_14070 IPR012340 Nucleic acid-binding, OB-fold BED35_14070 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G BED35_14070 IPR021968 Polyribonucleotide phosphorylase C-terminal BED35_14070 IPR022967 RNA-binding domain, S1 BED35_14070 IPR028878 Ribonuclease E BED35_14075 IPR007138 Antibiotic biosynthesis monooxygenase-like domain BED35_14075 IPR011008 Dimeric alpha-beta barrel BED35_14080 IPR002195 Dihydroorotase, conserved site BED35_14080 IPR004721 Dihydroorotase homodimeric type BED35_14080 IPR006680 Amidohydrolase 1 BED35_14080 IPR032466 BED35_14080 BED35_14085 IPR010391 DNA damage-inducible protein DinI-like BED35_14085 IPR036687 BED35_14085 BED35_14090 IPR025730 Biofilm regulator BssS BED35_14095 IPR006076 FAD dependent oxidoreductase BED35_14095 IPR023493 N-methyl-L-tryptophan oxidase MTOX BED35_14095 IPR036188 BED35_14095 BED35_14100 IPR000792 Transcription regulator LuxR, C-terminal BED35_14100 IPR016032 Signal transduction response regulator, C-terminal effector BED35_14100 IPR036388 BED35_14100 BED35_14105 IPR002549 Uncharacterised protein family UPF0118 BED35_14110 IPR001763 Rhodanese-like domain BED35_14110 IPR020936 Uncharacterised protein family UPF0176 BED35_14110 IPR022111 Protein of unknown function DUF3650 BED35_14110 IPR036873 BED35_14110 BED35_14120 IPR005614 NrfD family BED35_14125 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BED35_14125 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BED35_14135 IPR000792 Transcription regulator LuxR, C-terminal BED35_14135 IPR001789 Signal transduction response regulator, receiver domain BED35_14135 IPR011006 CheY-like superfamily BED35_14135 IPR036388 BED35_14135 BED35_14140 IPR004960 Bacterial lipid A biosynthesis acyltransferase BED35_14140 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase BED35_14145 IPR022385 Rhs repeat-associated core BED35_14150 IPR032808 BED35_14150 BED35_14160 IPR001958 Tetracycline resistance protein, TetA/multidrug resistance protein MdtG BED35_14160 IPR011701 Major facilitator superfamily BED35_14160 IPR023692 Multidrug resistance protein MdtG BED35_14160 IPR036259 BED35_14160 BED35_14165 IPR000109 Proton-dependent oligopeptide transporter family BED35_14165 IPR005279 Amino acid/peptide transporter family BED35_14165 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site BED35_14165 IPR036259 BED35_14165 BED35_14170 IPR001173 Glycosyltransferase 2-like BED35_14170 IPR023725 Glucan biosynthesis glucosyltransferase H BED35_14170 IPR029044 Nucleotide-diphospho-sugar transferases BED35_14175 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal BED35_14175 IPR011013 Galactose mutarotase-like domain BED35_14175 IPR013783 Immunoglobulin-like fold BED35_14175 IPR014438 Glucan biosynthesis, periplasmic, MdoG/D BED35_14175 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup BED35_14175 IPR014756 Immunoglobulin E-set BED35_14175 IPR023704 Glucan biosynthesis protein G BED35_14180 IPR002656 Acyltransferase 3 BED35_14180 IPR023723 Glucan biosynthesis protein C BED35_14190 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED35_14190 IPR003346 Transposase, IS116/IS110/IS902 BED35_14195 IPR005170 Transporter-associated domain BED35_14195 IPR006037 Regulator of K+ conductance, C-terminal BED35_14195 IPR006153 Cation/H+ exchanger BED35_14195 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 BED35_14195 IPR023729 K(+)/H(+) antiporter NhaP2 BED35_14195 IPR036318 BED35_14195 BED35_14195 IPR036721 BED35_14195 BED35_14195 IPR038770 BED35_14195 BED35_14200 IPR000620 Drug/metabolite transporter BED35_14205 IPR001690 Autoinducer synthesis protein BED35_14205 IPR016181 Acyl-CoA N-acyltransferase BED35_14205 IPR018311 Autoinducer synthesis, conserved site BED35_14210 IPR000792 Transcription regulator LuxR, C-terminal BED35_14210 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain BED35_14210 IPR016032 Signal transduction response regulator, C-terminal effector BED35_14210 IPR036388 BED35_14210 BED35_14210 IPR036693 BED35_14210 BED35_14215 IPR011990 Tetratricopeptide-like helical domain BED35_14225 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE BED35_14225 IPR013740 Redoxin BED35_14225 IPR017937 Thioredoxin, conserved site BED35_14225 IPR036249 BED35_14225 BED35_14235 IPR005614 NrfD family BED35_14235 IPR017566 NrfD BED35_14240 IPR017567 Cytochrome c nitrite reductase, Fe-S protein BED35_14240 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BED35_14240 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BED35_14245 IPR017564 Cytochrome c nitrite reductase, pentahaem subunit BED35_14245 IPR023155 Cytochrome c-552/4 BED35_14245 IPR036280 BED35_14245 BED35_14250 IPR003321 Cytochrome c552 BED35_14250 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit BED35_14250 IPR036280 BED35_14250 BED35_14260 IPR007453 Sulphur transfer protein DsrC/TusE BED35_14260 IPR025526 DsrC-like domain BED35_14265 IPR001792 Acylphosphatase-like domain BED35_14265 IPR017968 Acylphosphatase, conserved site BED35_14265 IPR020456 Acylphosphatase BED35_14265 IPR028627 Acylphosphatase, bacteria BED35_14265 IPR036046 BED35_14265 BED35_14270 IPR012427 Protein of unknown function DUF1622 BED35_14280 IPR002478 PUA domain BED35_14280 IPR015947 PUA-like domain BED35_14280 IPR019614 S-adenosylmethionine-dependent methyltransferase BED35_14280 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BED35_14280 IPR036974 BED35_14280 BED35_14285 IPR011722 Hemimethylated DNA-binding domain BED35_14285 IPR022866 Heat shock protein HspQ BED35_14285 IPR036623 BED35_14285 BED35_14290 IPR003781 CoA-binding BED35_14290 IPR036291 BED35_14290 BED35_14295 IPR018635 Uncharacterised protein family UPF0319 BED35_14300 IPR004363 Methylglyoxal synthase BED35_14300 IPR011607 Methylglyoxal synthase-like domain BED35_14300 IPR018148 Methylglyoxal synthase, active site BED35_14300 IPR036914 BED35_14300 BED35_14305 IPR014017 DNA helicase, UvrD-like, C-terminal BED35_14305 IPR022161 DNA helicase IV, N-terminal domain BED35_14305 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_14305 IPR034739 BED35_14305 BED35_14310 IPR005185 Protein of unknown function DUF307 BED35_14310 IPR031308 BED35_14310 BED35_14315 IPR010019 Integral membrane protein, YccS BED35_14315 IPR010020 Integral membrane protein, YccS/YhfK BED35_14315 IPR032692 BED35_14315 BED35_14320 IPR007076 TfoX, N-terminal BED35_14320 IPR007077 TfoX, C-terminal BED35_14320 IPR026256 Transcriptional regulator, TfoX/Sxy-type BED35_14330 IPR000498 Outer membrane protein, OmpA-like, transmembrane domain BED35_14330 IPR002368 Outer membrane protein, OmpA BED35_14330 IPR006664 Outer membrane protein, bacterial BED35_14330 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal BED35_14330 IPR006690 Outer membrane protein, OmpA-like, conserved site BED35_14330 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel BED35_14330 IPR036737 BED35_14330 BED35_14335 IPR009390 Macrodomain Ter protein, MatP BED35_14335 IPR013321 Arc-type ribbon-helix-helix BED35_14335 IPR035087 BED35_14335 BED35_14335 IPR035375 BED35_14335 BED35_14335 IPR038339 BED35_14335 BED35_14340 IPR008269 Peptidase S16, Lon C-terminal BED35_14340 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BED35_14340 IPR020568 Ribosomal protein S5 domain 2-type fold BED35_14345 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA BED35_14345 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ BED35_14345 IPR029069 HotDog domain BED35_14350 IPR002577 Helix-turn-helix, HxlR type BED35_14350 IPR036388 BED35_14350 BED35_14350 IPR036390 BED35_14350 BED35_14355 IPR014030 Beta-ketoacyl synthase, N-terminal BED35_14355 IPR014031 Beta-ketoacyl synthase, C-terminal BED35_14355 IPR016039 Thiolase-like BED35_14355 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 BED35_14355 IPR018201 Beta-ketoacyl synthase, active site BED35_14355 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BED35_14360 IPR005586 Protein of unknown function DUF330 BED35_14365 IPR003399 Mammalian cell entry-related BED35_14370 IPR005219 Conserved hypothetical protein CHP00155 BED35_14370 IPR007498 Paraquat-inducible protein A BED35_14375 IPR003439 ABC transporter-like BED35_14375 IPR003593 AAA+ ATPase domain BED35_14375 IPR017871 ABC transporter, conserved site BED35_14375 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_14375 IPR032524 BED35_14375 BED35_14375 IPR032781 BED35_14375 BED35_14375 IPR037118 BED35_14375 BED35_14380 IPR000241 Putative RNA methylase domain BED35_14380 IPR002052 DNA methylase, N-6 adenine-specific, conserved site BED35_14380 IPR004114 THUMP BED35_14380 IPR017244 Ribosomal RNA large subunit methyltransferase K/L BED35_14380 IPR019614 S-adenosylmethionine-dependent methyltransferase BED35_14380 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BED35_14385 IPR001041 2Fe-2S ferredoxin-type domain BED35_14385 IPR005302 Molybdenum cofactor sulfurase, C-terminal BED35_14385 IPR005303 MOSC, N-terminal beta barrel BED35_14385 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site BED35_14385 IPR011037 Pyruvate kinase-like, insert domain BED35_14385 IPR012675 Beta-grasp domain BED35_14385 IPR036010 BED35_14385 BED35_14390 IPR009809 Cell division protein ZapC BED35_14395 IPR001295 Dihydroorotate dehydrogenase, conserved site BED35_14395 IPR005719 Dihydroorotate dehydrogenase, class 2 BED35_14395 IPR005720 Dihydroorotate dehydrogenase domain BED35_14395 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 BED35_14395 IPR013785 Aldolase-type TIM barrel BED35_14400 IPR012779 Peptidase M1, alanyl aminopeptidase BED35_14400 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal BED35_14400 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal BED35_14400 IPR027268 BED35_14400 BED35_14400 IPR035414 BED35_14400 BED35_14400 IPR037144 BED35_14400 BED35_14400 IPR038438 BED35_14400 BED35_14405 IPR006406 Nicotinate phosphoribosyltransferase BED35_14405 IPR007229 Nicotinate phosphoribosyltransferase family BED35_14405 IPR036068 BED35_14405 BED35_14410 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb BED35_14410 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) BED35_14410 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type BED35_14410 IPR004522 Asparagine-tRNA ligase BED35_14410 IPR012340 Nucleic acid-binding, OB-fold BED35_14415 IPR001702 Porin, Gram-negative type BED35_14415 IPR001897 Porin, gammaproteobacterial BED35_14415 IPR013793 Porin, Gram-negative type, conserved site BED35_14415 IPR023614 Porin domain BED35_14420 IPR000796 Aspartate/other aminotransferase BED35_14420 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site BED35_14420 IPR004839 Aminotransferase, class I/classII BED35_14420 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BED35_14420 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 BED35_14420 IPR015424 Pyridoxal phosphate-dependent transferase BED35_14430 IPR001279 Beta-lactamase-like BED35_14430 IPR036866 BED35_14430 BED35_14435 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain BED35_14435 IPR010275 Protein of unknown function DUF882 BED35_14440 IPR002477 Peptidoglycan binding-like BED35_14440 IPR005490 L,D-transpeptidase catalytic domain BED35_14440 IPR036365 BED35_14440 BED35_14440 IPR038063 BED35_14440 BED35_14445 IPR007406 MukB, N-terminal domain BED35_14445 IPR012090 Chromosome partition protein MukB BED35_14445 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_14445 IPR032520 BED35_14445 BED35_14450 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE BED35_14455 IPR005582 Chromosome partition protein MukF BED35_14455 IPR033439 BED35_14455 BED35_14455 IPR033440 BED35_14455 BED35_14455 IPR033441 BED35_14455 BED35_14455 IPR036141 BED35_14455 BED35_14455 IPR036388 BED35_14455 BED35_14455 IPR036390 BED35_14455 BED35_14455 IPR038198 BED35_14455 BED35_14460 IPR025714 Methyltransferase domain BED35_14460 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BED35_14460 IPR033664 BED35_14460 BED35_14465 IPR003848 Domain of unknown function DUF218 BED35_14470 IPR011009 Protein kinase-like domain BED35_14470 IPR016477 Fructosamine/Ketosamine-3-kinase BED35_14475 IPR003329 Acylneuraminate cytidylyltransferase BED35_14475 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase BED35_14475 IPR029044 Nucleotide-diphospho-sugar transferases BED35_14480 IPR005651 Uncharacterised protein family UPF0434/Trm112 BED35_14480 IPR038053 BED35_14480 BED35_14485 IPR002059 Cold-shock protein, DNA-binding BED35_14485 IPR011129 Cold shock protein BED35_14485 IPR012156 Cold shock, CspA BED35_14485 IPR012340 Nucleic acid-binding, OB-fold BED35_14490 IPR002059 Cold-shock protein, DNA-binding BED35_14490 IPR011129 Cold shock protein BED35_14490 IPR012156 Cold shock, CspA BED35_14490 IPR012340 Nucleic acid-binding, OB-fold BED35_14490 IPR019844 Cold-shock conserved site BED35_14495 IPR009770 Domain of unknown function DUF1338 BED35_14500 IPR003758 Tetraacyldisaccharide 4'-kinase BED35_14500 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_14505 IPR003439 ABC transporter-like BED35_14505 IPR003593 AAA+ ATPase domain BED35_14505 IPR011527 ABC transporter type 1, transmembrane domain BED35_14505 IPR011917 ABC transporter, lipid A export, MsbA BED35_14505 IPR017871 ABC transporter, conserved site BED35_14505 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_14505 IPR036640 BED35_14505 BED35_14510 IPR001279 Beta-lactamase-like BED35_14510 IPR004477 ComEC/Rec2-related protein BED35_14510 IPR004797 Competence protein ComEC/Rec2 BED35_14510 IPR025405 Domain of unknown function DUF4131 BED35_14510 IPR036866 BED35_14510 BED35_14515 IPR000119 Histone-like bacterial DNA-binding protein BED35_14515 IPR005685 Integration host factor, beta subunit BED35_14515 IPR010992 Integration host factor (IHF)-like DNA-binding domain BED35_14515 IPR020816 Histone-like DNA-binding protein, conserved site BED35_14520 IPR000110 Ribosomal protein S1 BED35_14520 IPR003029 Ribosomal protein S1, RNA-binding domain BED35_14520 IPR012340 Nucleic acid-binding, OB-fold BED35_14520 IPR022967 RNA-binding domain, S1 BED35_14525 IPR003136 Cytidylate kinase BED35_14525 IPR011994 Cytidylate kinase domain BED35_14525 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_14530 IPR001986 Enolpyruvate transferase domain BED35_14530 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase BED35_14530 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta BED35_14530 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site BED35_14530 IPR036968 BED35_14530 BED35_14535 IPR000192 Aminotransferase class V domain BED35_14535 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BED35_14535 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 BED35_14535 IPR015424 Pyridoxal phosphate-dependent transferase BED35_14535 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site BED35_14535 IPR022278 Phosphoserine aminotransferase BED35_14540 IPR007353 Protein of unknown function DUF421 BED35_14540 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain BED35_14545 IPR004550 L-asparaginase, type II BED35_14545 IPR006034 Asparaginase/glutaminase BED35_14545 IPR020827 Asparaginase/glutaminase, active site 1 BED35_14545 IPR027473 L-asparaginase, C-terminal domain BED35_14545 IPR027474 L-asparaginase, N-terminal BED35_14545 IPR027475 Asparaginase/glutaminase, active site 2 BED35_14545 IPR036152 BED35_14545 BED35_14545 IPR037152 BED35_14545 BED35_14550 IPR003776 YcaO-like domain BED35_14555 IPR000292 Formate/nitrite transporter BED35_14555 IPR023271 Aquaporin-like BED35_14555 IPR023999 Formate transporter FocA, putative BED35_14555 IPR024002 Formate/nitrite transporter, conserved site BED35_14560 IPR001150 Glycine radical domain BED35_14560 IPR004184 Pyruvate formate lyase domain BED35_14560 IPR005949 Formate acetyltransferase BED35_14560 IPR019777 Formate C-acetyltransferase glycine radical, conserved site BED35_14565 IPR001989 Radical-activating enzyme, conserved site BED35_14565 IPR007197 Radical SAM BED35_14565 IPR012838 Pyruvate formate-lyase activating enzyme BED35_14565 IPR012839 Glycyl radical enzyme activase BED35_14565 IPR013785 Aldolase-type TIM barrel BED35_14570 IPR011701 Major facilitator superfamily BED35_14570 IPR023745 MSF-type transporter, YcaD BED35_14570 IPR036259 BED35_14570 BED35_14575 IPR001207 Transposase, mutator type BED35_14585 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED35_14585 IPR003346 Transposase, IS116/IS110/IS902 BED35_14590 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain BED35_14590 IPR002317 Serine-tRNA ligase, type1 BED35_14590 IPR010978 tRNA-binding arm BED35_14590 IPR015866 Serine-tRNA synthetase, type1, N-terminal BED35_14595 IPR003593 AAA+ ATPase domain BED35_14595 IPR003959 ATPase, AAA-type, core BED35_14595 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal BED35_14595 IPR021886 MgsA AAA+ ATPase C-terminal BED35_14595 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_14595 IPR032423 BED35_14595 BED35_14600 IPR004564 Outer membrane lipoprotein carrier protein LolA-like BED35_14600 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria BED35_14600 IPR029046 Lipoprotein localisation LolA/LolB/LppX BED35_14605 IPR002543 FtsK domain BED35_14605 IPR018541 FtsK gamma domain BED35_14605 IPR025199 Domain of unknown function DUF4117 BED35_14605 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_14605 IPR036388 BED35_14605 BED35_14605 IPR036390 BED35_14605 BED35_14610 IPR000485 AsnC-type HTH domain BED35_14610 IPR011008 Dimeric alpha-beta barrel BED35_14610 IPR019885 Transcription regulator HTH, AsnC-type, conserved site BED35_14610 IPR019887 Transcription regulator AsnC-type, C-terminal BED35_14610 IPR019888 Transcription regulator AsnC-type BED35_14610 IPR036388 BED35_14610 BED35_14610 IPR036390 BED35_14610 BED35_14615 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II BED35_14615 IPR005982 Thioredoxin reductase BED35_14615 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site BED35_14615 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain BED35_14615 IPR036188 BED35_14615 BED35_14620 IPR003439 ABC transporter-like BED35_14620 IPR003593 AAA+ ATPase domain BED35_14620 IPR011527 ABC transporter type 1, transmembrane domain BED35_14620 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD BED35_14620 IPR017871 ABC transporter, conserved site BED35_14620 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_14620 IPR036640 BED35_14620 BED35_14625 IPR003439 ABC transporter-like BED35_14625 IPR003593 AAA+ ATPase domain BED35_14625 IPR011527 ABC transporter type 1, transmembrane domain BED35_14625 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC BED35_14625 IPR017871 ABC transporter, conserved site BED35_14625 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_14625 IPR036640 BED35_14625 BED35_14630 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase BED35_14630 IPR016181 Acyl-CoA N-acyltransferase BED35_14635 IPR004368 Translation initiation factor IF-1 BED35_14635 IPR006196 RNA-binding domain, S1, IF1 type BED35_14635 IPR012340 Nucleic acid-binding, OB-fold BED35_14635 IPR022967 RNA-binding domain, S1 BED35_14640 IPR001270 ClpA/B family BED35_14640 IPR003593 AAA+ ATPase domain BED35_14640 IPR003959 ATPase, AAA-type, core BED35_14640 IPR004176 Clp, N-terminal BED35_14640 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA BED35_14640 IPR018368 ClpA/B, conserved site 1 BED35_14640 IPR019489 Clp ATPase, C-terminal BED35_14640 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_14640 IPR028299 ClpA/B, conserved site 2 BED35_14640 IPR036628 BED35_14640 BED35_14645 IPR003769 Adaptor protein ClpS, core BED35_14645 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like BED35_14645 IPR022935 ATP-dependent Clp protease adaptor protein ClpS BED35_14650 IPR002059 Cold-shock protein, DNA-binding BED35_14650 IPR011129 Cold shock protein BED35_14650 IPR012156 Cold shock, CspA BED35_14650 IPR012340 Nucleic acid-binding, OB-fold BED35_14650 IPR012751 CspD, cold shock BED35_14650 IPR019844 Cold-shock conserved site BED35_14655 IPR003439 ABC transporter-like BED35_14655 IPR003593 AAA+ ATPase domain BED35_14655 IPR003838 Permease FtsX-like BED35_14655 IPR017871 ABC transporter, conserved site BED35_14655 IPR025857 MacB-like periplasmic core domain BED35_14655 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_14660 IPR006143 RND efflux pump, membrane fusion protein BED35_14660 IPR032317 BED35_14660 BED35_14665 IPR007488 Protein of unknown function DUF535 BED35_14670 IPR022602 Protein of unknown function DUF2813 BED35_14670 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_14675 IPR005642 Protein of unknown function DUF340, prokaryotic membrane BED35_14680 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase BED35_14680 IPR010048 Hydroxylamine reductase BED35_14680 IPR011254 Prismane-like BED35_14680 IPR016099 Prismane-like, alpha/beta-sandwich BED35_14680 IPR016100 Prismane, alpha-bundle BED35_14685 IPR001041 2Fe-2S ferredoxin-type domain BED35_14685 IPR001221 Phenol hydroxylase reductase BED35_14685 IPR001433 Oxidoreductase FAD/NAD(P)-binding BED35_14685 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site BED35_14685 IPR008333 Oxidoreductase, FAD-binding domain BED35_14685 IPR012675 Beta-grasp domain BED35_14685 IPR017938 Riboflavin synthase-like beta-barrel BED35_14685 IPR036010 BED35_14685 BED35_14685 IPR039261 BED35_14685 BED35_14690 IPR000399 TPP-binding enzyme, conserved site BED35_14690 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding BED35_14690 IPR012000 Thiamine pyrophosphate enzyme, central domain BED35_14690 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain BED35_14690 IPR029035 DHS-like NAD/FAD-binding domain BED35_14690 IPR029061 Thiamin diphosphate-binding fold BED35_14695 IPR007213 Leucine carboxyl methyltransferase BED35_14695 IPR011610 S-adenosyl-L-methionine-dependent methyltransferase, putative BED35_14695 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BED35_14700 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase BED35_14700 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BED35_14700 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 BED35_14700 IPR015424 Pyridoxal phosphate-dependent transferase BED35_14700 IPR023603 Threonine aldolase BED35_14705 IPR016040 NAD(P)-binding domain BED35_14705 IPR021295 Protein of unknown function DUF2867 BED35_14705 IPR036291 BED35_14705 BED35_14710 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain BED35_14710 IPR036291 BED35_14710 BED35_14715 IPR024289 Domain of unknown function DUF3828 BED35_14720 IPR003439 ABC transporter-like BED35_14720 IPR003593 AAA+ ATPase domain BED35_14720 IPR017871 ABC transporter, conserved site BED35_14720 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_14720 IPR030679 BED35_14720 BED35_14725 IPR001320 Ionotropic glutamate receptor BED35_14725 IPR001638 Extracellular solute-binding protein, family 3 BED35_14725 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein BED35_14725 IPR018313 Extracellular solute-binding protein, family 3, conserved site BED35_14730 IPR000515 MetI-like domain BED35_14730 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family BED35_14730 IPR035906 BED35_14730 BED35_14735 IPR000515 MetI-like domain BED35_14735 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family BED35_14735 IPR035906 BED35_14735 BED35_14740 IPR001320 Ionotropic glutamate receptor BED35_14740 IPR001638 Extracellular solute-binding protein, family 3 BED35_14740 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein BED35_14740 IPR018313 Extracellular solute-binding protein, family 3, conserved site BED35_14745 IPR010280 (Uracil-5)-methyltransferase family BED35_14745 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC BED35_14745 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BED35_14745 IPR030390 BED35_14745 BED35_14745 IPR030391 BED35_14745 BED35_14750 IPR019703 Protein of unknown function DUF2593 BED35_14755 IPR000515 MetI-like domain BED35_14755 IPR035906 BED35_14755 BED35_14760 IPR000515 MetI-like domain BED35_14760 IPR035906 BED35_14760 BED35_14765 IPR003439 ABC transporter-like BED35_14765 IPR003593 AAA+ ATPase domain BED35_14765 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit BED35_14765 IPR008995 Molybdate/tungstate binding, C-terminal BED35_14765 IPR013611 Transport-associated OB, type 2 BED35_14765 IPR017871 ABC transporter, conserved site BED35_14765 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_14770 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein BED35_14770 IPR006059 Bacterial extracellular solute-binding, family 1 BED35_14775 IPR019660 Putative sensory transduction regulator YbjN BED35_14780 IPR010815 Protein of unknown function DUF1418 BED35_14785 IPR002109 Glutaredoxin BED35_14785 IPR011767 Glutaredoxin active site BED35_14785 IPR011902 Glutaredoxin, GrxA BED35_14785 IPR014025 Glutaredoxin subgroup BED35_14785 IPR036249 BED35_14785 BED35_14790 IPR006037 Regulator of K+ conductance, C-terminal BED35_14790 IPR006512 YidE/YbjL duplication BED35_14790 IPR023017 Transport protein YbjL, putative BED35_14790 IPR036721 BED35_14790 BED35_14795 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BED35_14795 IPR036938 BED35_14795 BED35_14800 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BED35_14800 IPR036938 BED35_14800 BED35_14805 IPR002915 DeoC/FbaB/ lacD aldolase BED35_14805 IPR011343 Deoxyribose-phosphate aldolase BED35_14805 IPR013785 Aldolase-type TIM barrel BED35_14805 IPR028581 Deoxyribose-phosphate aldolase type I BED35_14810 IPR001034 HTH DeoR N-terminal domain BED35_14810 IPR014036 DeoR C-terminal sensor domain BED35_14810 IPR018356 Transcription regulator, HTH DeoR-type, conserved site BED35_14810 IPR037171 BED35_14810 BED35_14815 IPR004694 Hydroxy amino acid transporter BED35_14815 IPR018227 Tryptophan/tyrosine permease BED35_14820 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form BED35_14820 IPR005130 Serine dehydratase-like, alpha subunit BED35_14820 IPR005131 Serine dehydratase beta chain BED35_14820 IPR029009 Allosteric substrate binding domain BED35_14825 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED35_14825 IPR003346 Transposase, IS116/IS110/IS902 BED35_14830 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal BED35_14830 IPR012338 Beta-lactamase/transpeptidase-like BED35_14830 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal BED35_14830 IPR015956 Penicillin-binding protein-associated BED35_14830 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A BED35_14830 IPR037167 BED35_14830 BED35_14835 IPR000644 CBS domain BED35_14835 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site BED35_14835 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme BED35_14835 IPR036052 BED35_14835 BED35_14840 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme BED35_14840 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BED35_14840 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 BED35_14840 IPR015424 Pyridoxal phosphate-dependent transferase BED35_14845 IPR000515 MetI-like domain BED35_14845 IPR035906 BED35_14845 BED35_14850 IPR003439 ABC transporter-like BED35_14850 IPR003593 AAA+ ATPase domain BED35_14850 IPR017871 ABC transporter, conserved site BED35_14850 IPR018449 NIL domain BED35_14850 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_14855 IPR004872 Lipoprotein NlpA family BED35_14860 IPR005123 Oxoglutarate/iron-dependent dioxygenase BED35_14860 IPR026992 Non-haem dioxygenase N-terminal domain BED35_14860 IPR027443 Isopenicillin N synthase-like BED35_14865 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial BED35_14865 IPR023214 HAD-like domain BED35_14865 IPR036412 BED35_14865 BED35_14870 IPR004045 Glutathione S-transferase, N-terminal BED35_14870 IPR004046 Glutathione S-transferase, C-terminal BED35_14870 IPR036249 BED35_14870 BED35_14870 IPR036282 BED35_14870 BED35_14875 IPR000531 TonB-dependent receptor, beta-barrel BED35_14875 IPR010916 TonB box, conserved site BED35_14875 IPR012910 TonB-dependent receptor, plug BED35_14875 IPR036942 BED35_14875 BED35_14875 IPR037066 BED35_14875 BED35_14880 IPR003439 ABC transporter-like BED35_14880 IPR003593 AAA+ ATPase domain BED35_14880 IPR017871 ABC transporter, conserved site BED35_14880 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_14885 IPR000522 ABC transporter, permease protein BED35_14885 IPR037294 BED35_14885 BED35_14890 IPR002293 Amino acid/polyamine transporter I BED35_14890 IPR004840 Amino acid permease, conserved site BED35_14890 IPR004841 Amino acid permease/ SLC12A domain BED35_14895 IPR000847 Transcription regulator HTH, LysR BED35_14895 IPR005119 LysR, substrate-binding BED35_14895 IPR036388 BED35_14895 BED35_14895 IPR036390 BED35_14895 BED35_14910 IPR004630 Uncharacterised protein family UPF0324, bacteria BED35_14910 IPR018383 Uncharacterised protein family UPF0324, prokaryote BED35_14915 IPR001719 AP endonuclease 2 BED35_14915 IPR013022 Xylose isomerase-like, TIM barrel domain BED35_14915 IPR018246 AP endonuclease 2, zinc binding site BED35_14915 IPR036237 BED35_14915 BED35_14920 IPR000015 Outer membrane usher protein BED35_14920 IPR018030 Fimbrial membrane usher, conserved site BED35_14920 IPR025885 PapC, N-terminal domain BED35_14920 IPR025949 PapC-like, C-terminal domain BED35_14920 IPR037224 BED35_14920 BED35_14925 IPR001829 Pili assembly chaperone, bacterial BED35_14925 IPR008962 PapD-like BED35_14925 IPR013783 Immunoglobulin-like fold BED35_14925 IPR016147 PapD, N-terminal, bacterial BED35_14925 IPR016148 Pili assembly chaperone, C-terminal domain BED35_14925 IPR018046 Pili assembly chaperone, conserved site BED35_14925 IPR036316 BED35_14925 BED35_14935 IPR035182 BED35_14935 BED35_14940 IPR001867 Signal transduction response regulator, C-terminal BED35_14940 IPR016032 Signal transduction response regulator, C-terminal effector BED35_14940 IPR036388 BED35_14940 BED35_14945 IPR003352 Phosphotransferase system, EIIC BED35_14945 IPR003353 Phosphotransferase system, fructose-specific IIB subunit BED35_14945 IPR003501 Phosphotransferase system, EIIB component, type 2/3 BED35_14945 IPR006327 Phosphotransferase system, fructose IIC component BED35_14945 IPR036095 BED35_14945 BED35_14950 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site BED35_14950 IPR011611 Carbohydrate kinase PfkB BED35_14950 IPR017583 Tagatose/fructose phosphokinase BED35_14950 IPR022463 Fructose 1-phosphate kinase BED35_14950 IPR029056 Ribokinase-like BED35_14955 IPR000032 Phosphocarrier HPr protein-like BED35_14955 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site BED35_14955 IPR002114 Phosphotransferase system, HPr serine phosphorylation site BED35_14955 IPR002178 PTS EIIA type-2 domain BED35_14955 IPR016152 Phosphotransferase/anion transporter BED35_14955 IPR035895 BED35_14955 BED35_14960 IPR000086 NUDIX hydrolase domain BED35_14960 IPR015797 NUDIX hydrolase domain-like BED35_14960 IPR020084 NUDIX hydrolase, conserved site BED35_14960 IPR020476 NUDIX hydrolase BED35_14965 IPR005126 NapC/NirT cytochrome c, N-terminal BED35_14965 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK BED35_14965 IPR036280 BED35_14965 BED35_14965 IPR038266 BED35_14965 BED35_14970 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site BED35_14970 IPR006656 Molybdopterin oxidoreductase BED35_14970 IPR006657 Molydopterin dinucleotide-binding domain BED35_14970 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase BED35_14970 IPR009010 Aspartate decarboxylase-like domain BED35_14975 IPR005358 Putative zinc- or iron-chelating domain containing protein BED35_14980 IPR002293 Amino acid/polyamine transporter I BED35_14980 IPR013059 Tryptophan/tyrosine transporter BED35_14980 IPR018227 Tryptophan/tyrosine permease BED35_14985 IPR001059 Translation elongation factor P/YeiP, central BED35_14985 IPR008991 Translation protein SH3-like domain BED35_14985 IPR011897 Translation elongation factor P-like, YeiP BED35_14985 IPR012340 Nucleic acid-binding, OB-fold BED35_14985 IPR013185 Translation elongation factor, KOW-like BED35_14985 IPR013852 Translation elongation factor P/YeiP, conserved site BED35_14985 IPR014722 Ribosomal protein L2 domain 2 BED35_14985 IPR015365 Elongation factor P, C-terminal BED35_14985 IPR020599 Translation elongation factor P/YeiP BED35_14990 IPR004628 Mannonate dehydratase BED35_14990 IPR036237 BED35_14990 BED35_15000 IPR000669 Mannitol dehydrogenase BED35_15000 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like BED35_15000 IPR013118 Mannitol dehydrogenase, C-terminal BED35_15000 IPR013131 Mannitol dehydrogenase, N-terminal BED35_15000 IPR013328 Dehydrogenase, multihelical BED35_15000 IPR023027 Mannitol dehydrogenase, conserved site BED35_15000 IPR036291 BED35_15000 BED35_15005 IPR000524 Transcription regulator HTH, GntR BED35_15005 IPR008920 Transcription regulator FadR/GntR, C-terminal BED35_15005 IPR011711 GntR, C-terminal BED35_15005 IPR036388 BED35_15005 BED35_15005 IPR036390 BED35_15005 BED35_15015 IPR003495 CobW/HypB/UreG domain BED35_15015 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal BED35_15015 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_15020 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BED35_15020 IPR032908 BED35_15020 BED35_15020 IPR036938 BED35_15020 BED35_15025 IPR000064 Endopeptidase, NLPC/P60 domain BED35_15025 IPR038765 BED35_15025 BED35_15035 IPR001633 EAL domain BED35_15035 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain BED35_15035 IPR035919 BED35_15035 BED35_15040 IPR000914 Bacterial extracellular solute-binding protein, family 5 BED35_15040 IPR030678 BED35_15040 BED35_15045 IPR000515 MetI-like domain BED35_15045 IPR035906 BED35_15045 BED35_15050 IPR000515 MetI-like domain BED35_15050 IPR025966 Oligopeptide transport permease C-like, N-terminal domain BED35_15050 IPR035906 BED35_15050 BED35_15055 IPR003439 ABC transporter-like BED35_15055 IPR003593 AAA+ ATPase domain BED35_15055 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal BED35_15055 IPR017871 ABC transporter, conserved site BED35_15055 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_15060 IPR020489 Uncharacterised protein family YejG BED35_15065 IPR004812 Drug resistance transporter Bcr/CmlA subfamily BED35_15065 IPR011701 Major facilitator superfamily BED35_15065 IPR036259 BED35_15065 BED35_15070 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F BED35_15070 IPR002942 RNA-binding S4 domain BED35_15070 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F BED35_15070 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site BED35_15070 IPR020103 Pseudouridine synthase, catalytic domain BED35_15070 IPR036986 BED35_15070 BED35_15075 IPR001650 Helicase, C-terminal BED35_15075 IPR006935 Helicase/UvrB domain BED35_15075 IPR011332 Zinc-binding ribosomal protein BED35_15075 IPR014001 Helicase, superfamily 1/2, ATP-binding domain BED35_15075 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_15080 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain BED35_15080 IPR020055 Ribosomal protein L25, short-form BED35_15080 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain BED35_15080 IPR029751 Ribosomal protein L25 BED35_15085 IPR007358 Nucleoid-associated protein NdpA BED35_15090 IPR009857 Uncharacterised protein family UPF0352 BED35_15090 IPR023202 YejL-like domain BED35_15095 IPR000917 Sulfatase BED35_15095 IPR012159 Membrane sulfatase, HI0842-related BED35_15095 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha BED35_15095 IPR017850 Alkaline-phosphatase-like, core domain BED35_15095 IPR024588 Membrane sulfatase, HI0842-related, N-terminal domain BED35_15110 IPR010862 Protein of unknown function DUF1493 BED35_15115 IPR001207 Transposase, mutator type BED35_15120 IPR010546 Protein of unknown function DUF1120 BED35_15125 IPR002514 Transposase IS3/IS911family BED35_15125 IPR009057 Homeodomain-like BED35_15130 IPR025948 HTH-like domain BED35_15140 IPR001077 O-methyltransferase, family 2 BED35_15140 IPR016461 Caffeate O-methyltransferase (COMT) family BED35_15140 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BED35_15140 IPR036388 BED35_15140 BED35_15140 IPR036390 BED35_15140 BED35_15145 IPR001148 Alpha carbonic anhydrase BED35_15145 IPR018338 Carbonic anhydrase, alpha-class, conserved site BED35_15145 IPR036398 BED35_15145 BED35_15150 IPR001360 Glycoside hydrolase, family 1 BED35_15150 IPR017853 Glycoside hydrolase, superfamily BED35_15150 IPR018120 Glycoside hydrolase, family 1, active site BED35_15150 IPR033132 BED35_15150 BED35_15155 IPR003352 Phosphotransferase system, EIIC BED35_15155 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site BED35_15155 IPR036878 BED35_15155 BED35_15160 IPR000281 Helix-turn-helix protein RpiR BED35_15160 IPR001347 Sugar isomerase (SIS) BED35_15160 IPR009057 Homeodomain-like BED35_15160 IPR036388 BED35_15160 BED35_15170 IPR022538 Protein of unknown function DUF2570 BED35_15180 IPR010534 Bacteriophage 933W, GpQ BED35_15185 IPR001387 Cro/C1-type helix-turn-helix domain BED35_15185 IPR010982 Lambda repressor-like, DNA-binding domain BED35_15185 IPR015927 Peptidase S24/S26A/S26B/S26C BED35_15185 IPR036286 BED35_15185 BED35_15190 IPR010391 DNA damage-inducible protein DinI-like BED35_15190 IPR036687 BED35_15190 BED35_15195 IPR000036 Peptidase A26, omptin BED35_15195 IPR020080 Outer membrane adhesin/peptidase omptin BED35_15200 IPR003660 HAMP linker domain BED35_15200 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BED35_15200 IPR004090 Chemotaxis methyl-accepting receptor BED35_15200 IPR029151 Periplasmic sensor domain-like BED35_15200 IPR033479 BED35_15200 BED35_15205 IPR001279 Beta-lactamase-like BED35_15205 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D BED35_15205 IPR036866 BED35_15205 BED35_15210 IPR036259 BED35_15210 BED35_15215 IPR001466 Beta-lactamase-related BED35_15215 IPR012338 Beta-lactamase/transpeptidase-like BED35_15230 IPR001702 Porin, Gram-negative type BED35_15230 IPR001897 Porin, gammaproteobacterial BED35_15230 IPR013793 Porin, Gram-negative type, conserved site BED35_15230 IPR023614 Porin domain BED35_15235 IPR003997 RTX secretion protein D, Gram-negative bacteria BED35_15235 IPR006143 RND efflux pump, membrane fusion protein BED35_15235 IPR006144 Secretion protein HlyD, conserved site BED35_15240 IPR003997 RTX secretion protein D, Gram-negative bacteria BED35_15240 IPR039562 BED35_15240 BED35_15245 IPR011701 Major facilitator superfamily BED35_15245 IPR036259 BED35_15245 BED35_15250 IPR003594 Histidine kinase-like ATPase, C-terminal domain BED35_15250 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain BED35_15250 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain BED35_15250 IPR030861 BED35_15250 BED35_15250 IPR032306 BED35_15250 BED35_15250 IPR036097 BED35_15250 BED35_15250 IPR036641 BED35_15250 BED35_15250 IPR036890 BED35_15250 BED35_15250 IPR038616 BED35_15250 BED35_15255 IPR000792 Transcription regulator LuxR, C-terminal BED35_15255 IPR001789 Signal transduction response regulator, receiver domain BED35_15255 IPR011006 CheY-like superfamily BED35_15255 IPR016032 Signal transduction response regulator, C-terminal effector BED35_15255 IPR030864 BED35_15255 BED35_15255 IPR036388 BED35_15255 BED35_15260 IPR001789 Signal transduction response regulator, receiver domain BED35_15260 IPR003594 Histidine kinase-like ATPase, C-terminal domain BED35_15260 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain BED35_15260 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BED35_15260 IPR011006 CheY-like superfamily BED35_15260 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal BED35_15260 IPR030856 BED35_15260 BED35_15260 IPR036097 BED35_15260 BED35_15260 IPR036890 BED35_15260 BED35_15260 IPR038388 BED35_15260 BED35_15265 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal BED35_15265 IPR005743 DNA gyrase, subunit A BED35_15265 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel BED35_15265 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain BED35_15265 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta BED35_15265 IPR013760 DNA topoisomerase, type IIA-like domain BED35_15265 IPR035516 BED35_15265 BED35_15270 IPR010233 Ubiquinone biosynthesis O-methyltransferase BED35_15270 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BED35_15275 IPR000788 Ribonucleotide reductase large subunit, C-terminal BED35_15275 IPR005144 ATP-cone BED35_15275 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal BED35_15275 IPR013346 Ribonucleotide reductase, class I , alpha subunit BED35_15275 IPR013509 Ribonucleotide reductase large subunit, N-terminal BED35_15280 IPR000358 Ribonucleotide reductase small subunit BED35_15280 IPR009078 Ferritin-like superfamily BED35_15280 IPR012348 Ribonucleotide reductase-related BED35_15280 IPR030475 BED35_15280 BED35_15290 IPR005658 Proteinase inhibitor I11, ecotin BED35_15290 IPR023084 Proteinase inhibitor I11, ecotin, gammaproteobacteria BED35_15290 IPR036198 BED35_15290 BED35_15305 IPR001453 Molybdopterin binding domain BED35_15305 IPR008135 Competence-induced protein CinA BED35_15305 IPR036425 BED35_15305 BED35_15305 IPR036653 BED35_15305 BED35_15310 IPR013059 Tryptophan/tyrosine transporter BED35_15310 IPR018227 Tryptophan/tyrosine permease BED35_15315 IPR009998 YfaZ BED35_15315 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel BED35_15315 IPR023614 Porin domain BED35_15320 IPR010582 Catalase immune-responsive domain BED35_15320 IPR011614 Catalase core domain BED35_15320 IPR018028 Catalase, mono-functional, haem-containing BED35_15320 IPR020835 Catalase-like domain BED35_15320 IPR024708 Catalase active site BED35_15320 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 BED35_15320 IPR037060 BED35_15320 BED35_15325 IPR000873 AMP-dependent synthetase/ligase BED35_15325 IPR010192 2-succinylbenzoate--CoA ligase BED35_15325 IPR020845 AMP-binding, conserved site BED35_15325 IPR025110 AMP-binding enzyme C-terminal domain BED35_15330 IPR010196 O-succinylbenzoic acid (OSB) synthetase BED35_15330 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal BED35_15330 IPR029017 Enolase N-terminal domain-like BED35_15330 IPR029065 Enolase C-terminal domain-like BED35_15330 IPR036849 BED35_15330 BED35_15335 IPR001753 Crotonase superfamily BED35_15335 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase BED35_15335 IPR014748 Crontonase, C-terminal BED35_15335 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site BED35_15335 IPR029045 ClpP/crotonase-like domain BED35_15340 IPR000073 Alpha/beta hydrolase fold-1 BED35_15340 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase BED35_15340 IPR029058 Alpha/Beta hydrolase fold BED35_15345 IPR004433 Menaquinone biosynthesis protein MenD BED35_15345 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding BED35_15345 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain BED35_15345 IPR029035 DHS-like NAD/FAD-binding domain BED35_15345 IPR029061 Thiamin diphosphate-binding fold BED35_15345 IPR032264 BED35_15345 BED35_15350 IPR004561 Isochorismate synthase BED35_15350 IPR005801 ADC synthase BED35_15350 IPR015890 Chorismate binding, C-terminal BED35_15350 IPR034681 BED35_15350 BED35_15355 IPR010279 Protein of unknown function DUF883, ElaB BED35_15360 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase BED35_15360 IPR004786 6-phosphogluconate dehydratase BED35_15360 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site BED35_15360 IPR037237 BED35_15360 BED35_15365 IPR005624 Domain of unknown function DUF336 BED35_15365 IPR010371 Uncharacterised protein family UPF0303 BED35_15365 IPR038084 BED35_15365 BED35_15370 IPR011701 Major facilitator superfamily BED35_15370 IPR036259 BED35_15370 BED35_15375 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BED35_15375 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain BED35_15375 IPR036291 BED35_15375 BED35_15380 IPR000843 Transcription regulator HTH, LacI BED35_15380 IPR001761 Periplasmic binding protein/LacI sugar binding domain BED35_15380 IPR010982 Lambda repressor-like, DNA-binding domain BED35_15380 IPR028082 Periplasmic binding protein-like I BED35_15385 IPR002347 Glucose/ribitol dehydrogenase BED35_15385 IPR020904 Short-chain dehydrogenase/reductase, conserved site BED35_15385 IPR036291 BED35_15385 BED35_15390 IPR006001 Carbohydrate kinase, thermoresistant glucokinase BED35_15390 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_15390 IPR031322 BED35_15390 BED35_15395 IPR004375 Conserved hypothetical protein CHP00022 BED35_15395 IPR037012 BED35_15395 BED35_15400 IPR009476 Protein of unknown function DUF1097 BED35_15410 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase BED35_15410 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 BED35_15415 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase BED35_15415 IPR003918 NADH:ubiquinone oxidoreductase BED35_15415 IPR010227 NADH-quinone oxidoreductase, chain M/4 BED35_15420 IPR001516 NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal BED35_15420 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase BED35_15420 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 BED35_15420 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup BED35_15425 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K BED35_15425 IPR039428 BED35_15425 BED35_15430 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 BED35_15435 IPR010226 NADH-quinone oxidoreductase, chain I BED35_15435 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BED35_15435 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BED35_15440 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H BED35_15440 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site BED35_15445 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site BED35_15445 IPR006656 Molybdopterin oxidoreductase BED35_15445 IPR006657 Molydopterin dinucleotide-binding domain BED35_15445 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain BED35_15445 IPR009010 Aspartate decarboxylase-like domain BED35_15445 IPR010228 NADH:ubiquinone oxidoreductase, subunit G BED35_15445 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding BED35_15445 IPR036010 BED35_15445 BED35_15450 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site BED35_15450 IPR011537 NADH ubiquinone oxidoreductase, F subunit BED35_15450 IPR011538 NADH:ubiquinone oxidoreductase, 51kDa subunit BED35_15450 IPR019575 NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding BED35_15450 IPR037207 BED35_15450 BED35_15450 IPR037225 BED35_15450 BED35_15455 IPR002023 NADH-quinone oxidoreductase subunit E-like BED35_15455 IPR036249 BED35_15455 BED35_15460 IPR001135 NADH-quinone oxidoreductase, subunit D BED35_15460 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit BED35_15460 IPR010218 NADH dehydrogenase, subunit C BED35_15460 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site BED35_15460 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H BED35_15460 IPR023062 NADH dehydrogenase, subunit CD BED35_15460 IPR029014 NiFe hydrogenase-like BED35_15460 IPR037232 BED35_15460 BED35_15460 IPR038290 BED35_15460 BED35_15465 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit BED35_15465 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit BED35_15470 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 BED35_15470 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid BED35_15470 IPR038430 BED35_15470 BED35_15475 IPR000847 Transcription regulator HTH, LysR BED35_15475 IPR005119 LysR, substrate-binding BED35_15475 IPR036388 BED35_15475 BED35_15475 IPR036390 BED35_15475 BED35_15480 IPR004839 Aminotransferase, class I/classII BED35_15480 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BED35_15480 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 BED35_15480 IPR015424 Pyridoxal phosphate-dependent transferase BED35_15485 IPR003607 HD/PDEase domain BED35_15485 IPR006674 HD domain BED35_15485 IPR022971 5'-deoxynucleotidase YfbR BED35_15490 IPR004680 Citrate transporter-like domain BED35_15490 IPR006037 Regulator of K+ conductance, C-terminal BED35_15490 IPR031312 BED35_15490 BED35_15490 IPR036721 BED35_15490 BED35_15500 IPR006439 HAD hydrolase, subfamily IA BED35_15500 IPR023198 Phosphoglycolate phosphatase, domain 2 BED35_15500 IPR023214 HAD-like domain BED35_15500 IPR036412 BED35_15500 BED35_15505 IPR005587 Uncharacterised protein family UPF0304, YfbU BED35_15505 IPR023145 YfbU, helix-hairpin domain BED35_15505 IPR023146 YfbU, alpha-helical bundle domain BED35_15510 IPR007334 Uncharacterised protein family UPF0208 BED35_15515 IPR000890 Aliphatic acid kinase, short-chain BED35_15515 IPR004372 Acetate/Proprionate kinase BED35_15515 IPR023865 Aliphatic acid kinase, short-chain, conserved site BED35_15520 IPR002505 Phosphate acetyl/butaryl transferase BED35_15520 IPR004614 Phosphate acetyltransferase BED35_15520 IPR010766 DRTGG BED35_15520 IPR016475 Phosphate acetyltransferase, bacteria BED35_15520 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_15520 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain like BED35_15525 IPR000843 Transcription regulator HTH, LacI BED35_15525 IPR010982 Lambda repressor-like, DNA-binding domain BED35_15525 IPR028082 Periplasmic binding protein-like I BED35_15530 IPR002178 PTS EIIA type-2 domain BED35_15530 IPR016152 Phosphotransferase/anion transporter BED35_15535 IPR003501 Phosphotransferase system, EIIB component, type 2/3 BED35_15535 IPR036095 BED35_15535 BED35_15540 IPR004703 Phosphotransferase system, sugar-specific permease component BED35_15545 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED35_15545 IPR003346 Transposase, IS116/IS110/IS902 BED35_15550 IPR000086 NUDIX hydrolase domain BED35_15550 IPR015797 NUDIX hydrolase domain-like BED35_15550 IPR024195 NUDIX hydrolase, YfcD, predicted BED35_15560 IPR001633 EAL domain BED35_15560 IPR035919 BED35_15560 BED35_15565 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain BED35_15565 IPR010099 Sugar nucleotide epimerase YfcH,-like putative BED35_15565 IPR013549 Domain of unknown function DUF1731 BED35_15565 IPR036291 BED35_15565 BED35_15575 IPR003439 ABC transporter-like BED35_15575 IPR003593 AAA+ ATPase domain BED35_15575 IPR017871 ABC transporter, conserved site BED35_15575 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_15575 IPR030679 BED35_15575 BED35_15580 IPR000515 MetI-like domain BED35_15580 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family BED35_15580 IPR035906 BED35_15580 BED35_15585 IPR000515 MetI-like domain BED35_15585 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family BED35_15585 IPR035906 BED35_15585 BED35_15590 IPR001638 Extracellular solute-binding protein, family 3 BED35_15590 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein BED35_15590 IPR018313 Extracellular solute-binding protein, family 3, conserved site BED35_15595 IPR003382 Flavoprotein BED35_15595 IPR004507 Decarboxylase UbiX/Pad1 BED35_15595 IPR036551 BED35_15595 BED35_15600 IPR000836 Phosphoribosyltransferase domain BED35_15600 IPR005854 Amidophosphoribosyl transferase BED35_15600 IPR029055 Nucleophile aminohydrolases, N-terminal BED35_15600 IPR029057 Phosphoribosyltransferase-like BED35_15605 IPR003825 Colicin V production, CvpA BED35_15610 IPR007730 Sporulation-related domain BED35_15610 IPR032898 BED35_15610 BED35_15610 IPR036680 BED35_15610 BED35_15615 IPR001645 Folylpolyglutamate synthetase BED35_15615 IPR004101 Mur ligase, C-terminal BED35_15615 IPR013221 Mur ligase, central BED35_15615 IPR018109 Folylpolyglutamate synthetase, conserved site BED35_15615 IPR036565 BED35_15615 BED35_15615 IPR036615 BED35_15615 BED35_15620 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit BED35_15620 IPR029045 ClpP/crotonase-like domain BED35_15620 IPR034733 BED35_15620 BED35_15625 IPR032816 BED35_15625 BED35_15630 IPR001406 Pseudouridine synthase I, TruA BED35_15630 IPR020095 Pseudouridine synthase I, TruA, C-terminal BED35_15630 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain BED35_15630 IPR020103 Pseudouridine synthase, catalytic domain BED35_15635 IPR000534 Semialdehyde dehydrogenase, NAD-binding BED35_15635 IPR012280 Semialdehyde dehydrogenase, dimerisation domain BED35_15635 IPR036291 BED35_15635 BED35_15640 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BED35_15640 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain BED35_15640 IPR020921 Erythronate-4-phosphate dehydrogenase BED35_15640 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain BED35_15640 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 BED35_15640 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site BED35_15640 IPR036291 BED35_15640 BED35_15640 IPR038251 BED35_15640 BED35_15645 IPR009057 Homeodomain-like BED35_15645 IPR011051 RmlC-like cupin domain BED35_15645 IPR013096 Cupin 2, conserved barrel BED35_15645 IPR014710 RmlC-like jelly roll fold BED35_15645 IPR018060 DNA binding HTH domain, AraC-type BED35_15645 IPR018062 HTH domain AraC-type, conserved site BED35_15645 IPR020449 Transcription regulator HTH, AraC- type BED35_15655 IPR000620 Drug/metabolite transporter BED35_15660 IPR000524 Transcription regulator HTH, GntR BED35_15660 IPR004839 Aminotransferase, class I/classII BED35_15660 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BED35_15660 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 BED35_15660 IPR015424 Pyridoxal phosphate-dependent transferase BED35_15660 IPR036388 BED35_15660 BED35_15660 IPR036390 BED35_15660 BED35_15665 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant BED35_15665 IPR036249 BED35_15665 BED35_15670 IPR012336 Thioredoxin-like fold BED35_15670 IPR036249 BED35_15670 BED35_15675 IPR003834 Cytochrome c assembly protein, transmembrane domain BED35_15675 IPR017937 Thioredoxin, conserved site BED35_15675 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain BED35_15675 IPR036249 BED35_15675 BED35_15685 IPR023597 Flagellar regulator Flk BED35_15690 IPR004680 Citrate transporter-like domain BED35_15695 IPR000560 Histidine phosphatase superfamily, clade-2 BED35_15695 IPR029033 Histidine phosphatase superfamily BED35_15695 IPR033379 BED35_15695 BED35_15700 IPR000843 Transcription regulator HTH, LacI BED35_15700 IPR010982 Lambda repressor-like, DNA-binding domain BED35_15700 IPR028082 Periplasmic binding protein-like I BED35_15705 IPR003501 Phosphotransferase system, EIIB component, type 2/3 BED35_15705 IPR036095 BED35_15705 BED35_15710 IPR003352 Phosphotransferase system, EIIC BED35_15710 IPR004501 Phosphotransferase system, EIIC component, type 3 BED35_15710 IPR004796 Phosphotransferase system, cellobiose-type IIC component BED35_15715 IPR001360 Glycoside hydrolase, family 1 BED35_15715 IPR017853 Glycoside hydrolase, superfamily BED35_15715 IPR018120 Glycoside hydrolase, family 1, active site BED35_15720 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit BED35_15720 IPR036542 BED35_15720 BED35_15725 IPR003192 Porin, LamB type BED35_15725 IPR036998 BED35_15725 BED35_15730 IPR001920 Asp/Glu racemase BED35_15730 IPR004380 Aspartate racemase BED35_15730 IPR015942 Asp/Glu/hydantoin racemase BED35_15740 IPR014030 Beta-ketoacyl synthase, N-terminal BED35_15740 IPR014031 Beta-ketoacyl synthase, C-terminal BED35_15740 IPR016039 Thiolase-like BED35_15740 IPR018201 Beta-ketoacyl synthase, active site BED35_15740 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BED35_15745 IPR006076 FAD dependent oxidoreductase BED35_15745 IPR008471 MnmC-like methyltransferase BED35_15745 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal BED35_15745 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC BED35_15745 IPR036188 BED35_15745 BED35_15750 IPR014987 Uncharacterised protein family YfcL BED35_15755 IPR007411 Protein of unknown function DUF462 BED35_15760 IPR002781 Transmembrane protein TauE like BED35_15765 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase BED35_15765 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain BED35_15770 IPR000453 Chorismate synthase BED35_15770 IPR020541 Chorismate synthase, conserved site BED35_15770 IPR035904 BED35_15770 BED35_15775 IPR002052 DNA methylase, N-6 adenine-specific, conserved site BED35_15775 IPR004556 Modification methylase HemK BED35_15775 IPR007848 Methyltransferase small domain BED35_15775 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase BED35_15775 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BED35_15780 IPR002625 Smr protein/MutS2 C-terminal BED35_15780 IPR022990 Uncharacterised protein family UPF0115 BED35_15780 IPR036063 BED35_15780 BED35_15785 IPR004449 Phosphohistidine phosphatase SixA, subgroup BED35_15785 IPR013078 Histidine phosphatase superfamily, clade-1 BED35_15785 IPR029033 Histidine phosphatase superfamily BED35_15790 IPR001753 Crotonase superfamily BED35_15790 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal BED35_15790 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding BED35_15790 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site BED35_15790 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like BED35_15790 IPR012802 Fatty oxidation complex, alpha subunit FadJ BED35_15790 IPR029045 ClpP/crotonase-like domain BED35_15790 IPR036291 BED35_15790 BED35_15795 IPR002155 Thiolase BED35_15795 IPR012806 Acetyl-CoA C-acyltransferase FadI BED35_15795 IPR016039 Thiolase-like BED35_15795 IPR020610 Thiolase, active site BED35_15795 IPR020613 Thiolase, conserved site BED35_15795 IPR020615 Thiolase, acyl-enzyme intermediate active site BED35_15795 IPR020616 Thiolase, N-terminal BED35_15795 IPR020617 Thiolase, C-terminal BED35_15800 IPR005272 Conserved hypothetical protein CHP00743 BED35_15800 IPR035571 BED35_15800 BED35_15805 IPR005017 Membrane protein, aromatic hydrocarbon degradation BED35_15810 IPR007428 VacJ-like lipoprotein BED35_15815 IPR011990 Tetratricopeptide-like helical domain BED35_15815 IPR017560 Cytochrome c-type biogenesis protein CcmI BED35_15820 IPR005616 Cytochrome C biogenesis protein CcmH BED35_15820 IPR038297 BED35_15820 BED35_15825 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE BED35_15825 IPR013740 Redoxin BED35_15825 IPR017937 Thioredoxin, conserved site BED35_15825 IPR036249 BED35_15825 BED35_15830 IPR002541 Cytochrome c assembly protein BED35_15830 IPR003567 Cytochrome c-type biogenesis protein BED35_15830 IPR003568 Cytochrome c-type biogenesis protein CcmF BED35_15830 IPR032523 BED35_15830 BED35_15835 IPR004329 CcmE/CycJ protein BED35_15835 IPR036127 BED35_15835 BED35_15840 IPR007078 Haem exporter protein D (CcmD) BED35_15845 IPR002541 Cytochrome c assembly protein BED35_15845 IPR003557 Cytochrome c-type biogenesis protein CcmC BED35_15850 IPR003544 Cytochrome c-type biogenesis protein CcmB BED35_15850 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria BED35_15855 IPR003439 ABC transporter-like BED35_15855 IPR003593 AAA+ ATPase domain BED35_15855 IPR005895 ABC transporter, haem export, CcmA BED35_15855 IPR017871 ABC transporter, conserved site BED35_15855 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_15860 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED35_15860 IPR003346 Transposase, IS116/IS110/IS902 BED35_15865 IPR000292 Formate/nitrite transporter BED35_15865 IPR023271 Aquaporin-like BED35_15875 IPR002104 Integrase, catalytic BED35_15875 IPR010998 Integrase, Lambda-type, N-terminal BED35_15875 IPR011010 DNA breaking-rejoining enzyme, catalytic core BED35_15875 IPR013762 Integrase-like, catalytic core BED35_15875 IPR025166 Domain of unknown function DUF4102 BED35_15875 IPR038488 BED35_15875 BED35_15885 IPR007684 Zinc finger, Ogr/Delta-type BED35_15890 IPR006171 Toprim domain BED35_15890 IPR009270 Domain of unknown function DUF927 BED35_15890 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal BED35_15910 IPR009228 Capsid scaffolding protein GpO BED35_15915 IPR006441 Bacteriophage P2, GpN, major capsid BED35_15925 IPR010260 Bacteriophage P4, Orf88 BED35_15930 IPR038488 BED35_15930 BED35_15935 IPR004624 PhnA protein BED35_15935 IPR013987 PhnA protein, N-terminal BED35_15935 IPR013988 PhnA protein, C-terminal BED35_15940 IPR005149 Transcription regulator PadR N-terminal BED35_15940 IPR036388 BED35_15940 BED35_15940 IPR036390 BED35_15940 BED35_15945 IPR024476 Protein of unknown function DUF3861 BED35_15950 IPR001360 Glycoside hydrolase, family 1 BED35_15950 IPR017853 Glycoside hydrolase, superfamily BED35_15950 IPR018120 Glycoside hydrolase, family 1, active site BED35_15950 IPR033132 BED35_15950 BED35_15955 IPR003352 Phosphotransferase system, EIIC BED35_15955 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site BED35_15955 IPR036878 BED35_15955 BED35_15960 IPR000843 Transcription regulator HTH, LacI BED35_15960 IPR010982 Lambda repressor-like, DNA-binding domain BED35_15960 IPR028082 Periplasmic binding protein-like I BED35_15965 IPR007372 Lipid/polyisoprenoid-binding, YceI-like BED35_15965 IPR023480 Uncharacterised protein family UPF0312/YceI BED35_15965 IPR036761 BED35_15965 BED35_15970 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase BED35_15970 IPR016174 Di-haem cytochrome, transmembrane BED35_15975 IPR013094 Alpha/beta hydrolase fold-3 BED35_15975 IPR029058 Alpha/Beta hydrolase fold BED35_15985 IPR005586 Protein of unknown function DUF330 BED35_15990 IPR003399 Mammalian cell entry-related BED35_15995 IPR003439 ABC transporter-like BED35_15995 IPR003593 AAA+ ATPase domain BED35_15995 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_16000 IPR003453 Permease domain BED35_16000 IPR030802 BED35_16000 BED35_16005 IPR011701 Major facilitator superfamily BED35_16005 IPR036259 BED35_16005 BED35_16010 IPR001647 DNA-binding HTH domain, TetR-type BED35_16010 IPR009057 Homeodomain-like BED35_16010 IPR036271 BED35_16010 BED35_16010 IPR039538 BED35_16010 BED35_16015 IPR011059 Metal-dependent hydrolase, composite domain BED35_16015 IPR013108 Amidohydrolase 3 BED35_16015 IPR032466 BED35_16015 BED35_16020 IPR002293 Amino acid/polyamine transporter I BED35_16020 IPR004841 Amino acid permease/ SLC12A domain BED35_16025 IPR011757 Lytic transglycosylase MltB BED35_16025 IPR023346 Lysozyme-like domain BED35_16025 IPR031304 BED35_16025 BED35_16030 IPR006061 Bacterial extracellular solute-binding family 1, conserved site BED35_16030 IPR026045 Ferric binding protein BED35_16035 IPR000515 MetI-like domain BED35_16035 IPR035906 BED35_16035 BED35_16040 IPR003439 ABC transporter-like BED35_16040 IPR003593 AAA+ ATPase domain BED35_16040 IPR008995 Molybdate/tungstate binding, C-terminal BED35_16040 IPR017871 ABC transporter, conserved site BED35_16040 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_16050 IPR014591 Uncharacterised conserved protein UCP034455 BED35_16050 IPR021125 Protein of unknown function DUF2127 BED35_16055 IPR031807 BED35_16055 BED35_16055 IPR035069 BED35_16055 BED35_16060 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase BED35_16060 IPR016174 Di-haem cytochrome, transmembrane BED35_16065 IPR004839 Aminotransferase, class I/classII BED35_16065 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BED35_16065 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 BED35_16065 IPR015424 Pyridoxal phosphate-dependent transferase BED35_16070 IPR000182 GNAT domain BED35_16070 IPR016181 Acyl-CoA N-acyltransferase BED35_16075 IPR010856 Protein of unknown function DUF1479 BED35_16075 IPR027443 Isopenicillin N synthase-like BED35_16085 IPR001789 Signal transduction response regulator, receiver domain BED35_16085 IPR007492 LytTR DNA-binding domain BED35_16085 IPR011006 CheY-like superfamily BED35_16095 IPR003836 Glucokinase BED35_16100 IPR007896 Transmembrane pair, bacterial BED35_16105 IPR000847 Transcription regulator HTH, LysR BED35_16105 IPR005119 LysR, substrate-binding BED35_16105 IPR036388 BED35_16105 BED35_16105 IPR036390 BED35_16105 BED35_16110 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding BED35_16110 IPR012000 Thiamine pyrophosphate enzyme, central domain BED35_16110 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain BED35_16110 IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme BED35_16110 IPR029035 DHS-like NAD/FAD-binding domain BED35_16110 IPR029061 Thiamin diphosphate-binding fold BED35_16115 IPR023210 NADP-dependent oxidoreductase domain BED35_16115 IPR036812 BED35_16115 BED35_16120 IPR019638 Protein of unknown function DUF2502 BED35_16125 IPR001046 NRAMP family BED35_16130 IPR002668 Concentrative nucleoside transporter N-terminal domain BED35_16130 IPR011642 Nucleoside recognition Gate BED35_16130 IPR011657 Concentrative nucleoside transporter C-terminal domain BED35_16160 IPR000924 Glutamyl/glutaminyl-tRNA synthetase BED35_16160 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site BED35_16160 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial BED35_16160 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding BED35_16160 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED35_16160 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain BED35_16160 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 BED35_16175 IPR009267 Protein of unknown function DUF925 BED35_16180 IPR025577 FlxA-like protein BED35_16185 IPR024530 Protein of unknown function DUF3820 BED35_16190 IPR001357 BRCT domain BED35_16190 IPR001679 NAD-dependent DNA ligase BED35_16190 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 BED35_16190 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type BED35_16190 IPR004150 NAD-dependent DNA ligase, OB-fold BED35_16190 IPR010994 RuvA domain 2-like BED35_16190 IPR012340 Nucleic acid-binding, OB-fold BED35_16190 IPR013839 NAD-dependent DNA ligase, adenylation BED35_16190 IPR013840 NAD-dependent DNA ligase, N-terminal BED35_16190 IPR018239 NAD-dependent DNA ligase, active site BED35_16190 IPR033136 BED35_16190 BED35_16190 IPR036420 BED35_16190 BED35_16195 IPR007449 ZipA, C-terminal FtsZ-binding domain BED35_16195 IPR011919 Cell division protein ZipA BED35_16195 IPR036765 BED35_16195 BED35_16200 IPR022985 CysZ, gammaproteobacteria BED35_16205 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site BED35_16205 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme BED35_16205 IPR005856 Cysteine synthase K/M BED35_16205 IPR005859 Cysteine synthase A BED35_16205 IPR036052 BED35_16205 BED35_16210 IPR000032 Phosphocarrier HPr protein-like BED35_16210 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site BED35_16210 IPR002114 Phosphotransferase system, HPr serine phosphorylation site BED35_16210 IPR035895 BED35_16210 BED35_16215 IPR000121 PEP-utilising enzyme, C-terminal BED35_16215 IPR006318 Phosphoenolpyruvate-utilising enzyme BED35_16215 IPR008279 PEP-utilising enzyme, mobile domain BED35_16215 IPR008731 Phosphotransferase system, enzyme I N-terminal BED35_16215 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain BED35_16215 IPR018274 PEP-utilising enzyme, active site BED35_16215 IPR023151 PEP-utilising enzyme, conserved site BED35_16215 IPR024692 Phosphotransferase system, enzyme I BED35_16215 IPR036618 BED35_16215 BED35_16215 IPR036637 BED35_16215 BED35_16220 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 BED35_16220 IPR011055 Duplicated hybrid motif BED35_16225 IPR003594 Histidine kinase-like ATPase, C-terminal domain BED35_16225 IPR003660 HAMP linker domain BED35_16225 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain BED35_16225 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BED35_16225 IPR036097 BED35_16225 BED35_16225 IPR036890 BED35_16225 BED35_16230 IPR001789 Signal transduction response regulator, receiver domain BED35_16230 IPR001867 Signal transduction response regulator, C-terminal BED35_16230 IPR011006 CheY-like superfamily BED35_16230 IPR016032 Signal transduction response regulator, C-terminal effector BED35_16230 IPR036388 BED35_16230 BED35_16235 IPR006143 RND efflux pump, membrane fusion protein BED35_16235 IPR032317 BED35_16235 BED35_16240 IPR003439 ABC transporter-like BED35_16240 IPR003593 AAA+ ATPase domain BED35_16240 IPR003838 Permease FtsX-like BED35_16240 IPR017871 ABC transporter, conserved site BED35_16240 IPR025857 MacB-like periplasmic core domain BED35_16240 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_16245 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site BED35_16245 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme BED35_16245 IPR005856 Cysteine synthase K/M BED35_16245 IPR005858 Cysteine synthase B BED35_16245 IPR036052 BED35_16245 BED35_16250 IPR003439 ABC transporter-like BED35_16250 IPR003593 AAA+ ATPase domain BED35_16250 IPR005666 Sulphate transport system permease protein 1 BED35_16250 IPR008995 Molybdate/tungstate binding, C-terminal BED35_16250 IPR017871 ABC transporter, conserved site BED35_16250 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_16255 IPR000515 MetI-like domain BED35_16255 IPR005667 Sulphate ABC transporter permease protein 2 BED35_16255 IPR011866 Sulphate ABC transporter, permease protein CysW BED35_16255 IPR035906 BED35_16255 BED35_16260 IPR000515 MetI-like domain BED35_16260 IPR005667 Sulphate ABC transporter permease protein 2 BED35_16260 IPR011865 Sulphate ABC transporter, permease protein CysT BED35_16260 IPR035906 BED35_16260 BED35_16265 IPR005669 Thiosulphate/Sulfate-binding protein BED35_16270 IPR004742 Sialic acid transporter BED35_16270 IPR011701 Major facilitator superfamily BED35_16270 IPR036259 BED35_16270 BED35_16275 IPR000281 Helix-turn-helix protein RpiR BED35_16275 IPR001347 Sugar isomerase (SIS) BED35_16275 IPR009057 Homeodomain-like BED35_16275 IPR036388 BED35_16275 BED35_16280 IPR004375 Conserved hypothetical protein CHP00022 BED35_16280 IPR037012 BED35_16280 BED35_16285 IPR000600 ROK BED35_16285 IPR023945 N-acetylmannosamine kinase, bacterial BED35_16290 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase BED35_16290 IPR011060 Ribulose-phosphate binding barrel BED35_16290 IPR013785 Aldolase-type TIM barrel BED35_16295 IPR002220 DapA-like BED35_16295 IPR013785 Aldolase-type TIM barrel BED35_16295 IPR020624 Dihydrodipicolinate synthetase, conserved site BED35_16300 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED35_16300 IPR003346 Transposase, IS116/IS110/IS902 BED35_16305 IPR006314 Dyp-type peroxidase BED35_16305 IPR011008 Dimeric alpha-beta barrel BED35_16310 IPR010938 Protein of unknown function DUF1131 BED35_16310 IPR038714 BED35_16310 BED35_16315 IPR005220 Viral OB-fold, YgiW BED35_16315 IPR016052 Bacteriophage 933W, L0136 BED35_16315 IPR036700 BED35_16315 BED35_16320 IPR000182 GNAT domain BED35_16320 IPR016181 Acyl-CoA N-acyltransferase BED35_16320 IPR023072 Acetyltransferase, YpeA BED35_16325 IPR001260 Coproporphyrinogen III oxidase, aerobic BED35_16325 IPR018375 Coproporphyrinogen III oxidase, conserved site BED35_16325 IPR036406 BED35_16325 BED35_16330 IPR003791 Protein of unknown function UPF0178 BED35_16340 IPR002505 Phosphate acetyl/butaryl transferase BED35_16340 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase BED35_16340 IPR012301 Malic enzyme, N-terminal domain BED35_16340 IPR012302 Malic enzyme, NAD-binding BED35_16340 IPR015884 Malic enzyme, conserved site BED35_16340 IPR036291 BED35_16340 BED35_16340 IPR037062 BED35_16340 BED35_16345 IPR000086 NUDIX hydrolase domain BED35_16345 IPR004385 Nucleoside diphosphate pyrophosphatase BED35_16345 IPR015797 NUDIX hydrolase domain-like BED35_16355 IPR005591 Nitrate reductase cytochrome c-type subunit NapB BED35_16355 IPR036280 BED35_16355 BED35_16360 IPR006656 Molybdopterin oxidoreductase BED35_16360 IPR006657 Molydopterin dinucleotide-binding domain BED35_16360 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain BED35_16360 IPR009010 Aspartate decarboxylase-like domain BED35_16360 IPR010051 Periplasmic nitrate reductase, large subunit BED35_16360 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal BED35_16360 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site BED35_16365 IPR005623 Chaperone NapD, nitrate reductase assembly BED35_16370 IPR004496 Ferredoxin-type protein NapF BED35_16370 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BED35_16370 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BED35_16375 IPR000792 Transcription regulator LuxR, C-terminal BED35_16375 IPR001789 Signal transduction response regulator, receiver domain BED35_16375 IPR011006 CheY-like superfamily BED35_16375 IPR016032 Signal transduction response regulator, C-terminal effector BED35_16380 IPR017162 Uncharacterised conserved protein UCP037266 BED35_16380 IPR036388 BED35_16380 BED35_16385 IPR001036 Acriflavin resistance protein BED35_16385 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 BED35_16385 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BED35_16395 IPR003776 YcaO-like domain BED35_16400 IPR011990 Tetratricopeptide-like helical domain BED35_16405 IPR006504 Transcriptional regulator Spx/MgsR BED35_16405 IPR006660 Arsenate reductase-like BED35_16405 IPR036249 BED35_16405 BED35_16410 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site BED35_16410 IPR002933 Peptidase M20 BED35_16410 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria BED35_16410 IPR011650 Peptidase M20, dimerisation domain BED35_16410 IPR036264 BED35_16410 BED35_16415 IPR003709 Peptidase M15B/M15C BED35_16415 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain BED35_16420 IPR020910 Uncharacterised protein family UPF0370 BED35_16435 IPR000758 Virulence-related outer membrane protein BED35_16435 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel BED35_16435 IPR027385 Outer membrane protein beta-barrel BED35_16450 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED35_16450 IPR003346 Transposase, IS116/IS110/IS902 BED35_16455 IPR004929 Bacteriophage Rz lysis protein BED35_16460 IPR003140 Phospholipase/carboxylesterase/thioesterase BED35_16460 IPR029058 Alpha/Beta hydrolase fold BED35_16470 IPR000182 GNAT domain BED35_16470 IPR007807 Helicase domain BED35_16470 IPR013562 Domain of unknown function DUF1726 BED35_16470 IPR016181 Acyl-CoA N-acyltransferase BED35_16470 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA BED35_16470 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_16470 IPR033442 BED35_16470 BED35_16470 IPR038321 BED35_16470 BED35_16475 IPR007382 Uncharacterised protein family UPF0756, transmembrame BED35_16480 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative BED35_16485 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase BED35_16485 IPR018236 SAICAR synthetase, conserved site BED35_16485 IPR028923 SAICAR synthetase/ADE2, N-terminal BED35_16490 IPR010653 Lipoprotein, NlpB BED35_16490 IPR014524 Outer membrane protein assembly factor BamC BED35_16495 IPR002220 DapA-like BED35_16495 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA BED35_16495 IPR013785 Aldolase-type TIM barrel BED35_16495 IPR020624 Dihydrodipicolinate synthetase, conserved site BED35_16495 IPR020625 Dihydrodipicolinate synthetase, active site BED35_16500 IPR016867 Glycine cleavage repressor GcvR BED35_16505 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant BED35_16505 IPR024706 Peroxiredoxin, AhpC-type BED35_16505 IPR036249 BED35_16505 BED35_16510 IPR002549 Uncharacterised protein family UPF0118 BED35_16515 IPR001915 Peptidase M48 BED35_16515 IPR011990 Tetratricopeptide-like helical domain BED35_16515 IPR030873 BED35_16515 BED35_16520 IPR006659 Arsenate reductase BED35_16520 IPR006660 Arsenate reductase-like BED35_16520 IPR036249 BED35_16520 BED35_16525 IPR013317 Chromosomal replication control, initiator (DnaA)/regulator (Hda) BED35_16525 IPR017788 DnaA regulatory inactivator Hda BED35_16525 IPR020591 Chromosomal replication control, initiator DnaA-like BED35_16525 IPR022864 DnaA regulatory inactivator Hda, Enterobacteriaceae BED35_16525 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_16530 IPR006042 Xanthine/uracil permease BED35_16530 IPR006043 Xanthine/uracil/vitamin C permease BED35_16535 IPR005765 Uracil phosphoribosyl transferase BED35_16535 IPR029057 Phosphoribosyltransferase-like BED35_16535 IPR034332 BED35_16535 BED35_16545 IPR001555 Phosphoribosylglycinamide formyltransferase, active site BED35_16545 IPR002376 Formyl transferase, N-terminal BED35_16545 IPR004607 Phosphoribosylglycinamide formyltransferase BED35_16545 IPR036477 BED35_16545 BED35_16550 IPR000182 GNAT domain BED35_16550 IPR016181 Acyl-CoA N-acyltransferase BED35_16555 IPR020193 Flagellin lysine-N-methylase, C-terminal BED35_16560 IPR003439 ABC transporter-like BED35_16560 IPR003593 AAA+ ATPase domain BED35_16560 IPR005670 Phosphate transport system permease protein 1 BED35_16560 IPR017871 ABC transporter, conserved site BED35_16560 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_16565 IPR000515 MetI-like domain BED35_16565 IPR005672 Phosphate transport system permease protein PstA BED35_16565 IPR035906 BED35_16565 BED35_16570 IPR000515 MetI-like domain BED35_16570 IPR035906 BED35_16570 BED35_16580 IPR003695 Ppx/GppA phosphatase BED35_16580 IPR022371 Exopolyphosphatase BED35_16580 IPR030673 BED35_16580 BED35_16585 IPR022576 Protein of unknown function DUF2633 BED35_16595 IPR000014 PAS domain BED35_16595 IPR000160 GGDEF domain BED35_16595 IPR001610 PAC motif BED35_16595 IPR001633 EAL domain BED35_16595 IPR007895 MASE1 BED35_16595 IPR013655 PAS fold-3 BED35_16595 IPR013656 PAS fold-4 BED35_16595 IPR029787 Nucleotide cyclase BED35_16595 IPR035919 BED35_16595 BED35_16595 IPR035965 BED35_16595 BED35_16600 IPR013126 Heat shock protein 70 family BED35_16600 IPR018181 Heat shock protein 70, conserved site BED35_16605 IPR006143 RND efflux pump, membrane fusion protein BED35_16605 IPR022824 Multidrug resistance protein MdtA BED35_16605 IPR039562 BED35_16605 BED35_16610 IPR001036 Acriflavin resistance protein BED35_16610 IPR022831 Multidrug resistance protein MdtB BED35_16610 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BED35_16615 IPR001036 Acriflavin resistance protein BED35_16615 IPR023931 Multidrug resistance protein MdtC BED35_16615 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BED35_16620 IPR004638 Drug resistance transporter EmrB/QacA subfamily BED35_16620 IPR011701 Major facilitator superfamily BED35_16620 IPR023721 Multidrug resistance protein MdtD, putative BED35_16620 IPR036259 BED35_16620 BED35_16625 IPR003594 Histidine kinase-like ATPase, C-terminal domain BED35_16625 IPR003660 HAMP linker domain BED35_16625 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain BED35_16625 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BED35_16625 IPR036097 BED35_16625 BED35_16625 IPR036890 BED35_16625 BED35_16630 IPR001789 Signal transduction response regulator, receiver domain BED35_16630 IPR001867 Signal transduction response regulator, C-terminal BED35_16630 IPR011006 CheY-like superfamily BED35_16630 IPR036388 BED35_16630 BED35_16635 IPR010879 Domain of unknown function DUF1508 BED35_16635 IPR036913 BED35_16635 BED35_16640 IPR001539 Peptidase U32 BED35_16640 IPR032525 BED35_16640 BED35_16645 IPR001206 Diacylglycerol kinase, catalytic domain BED35_16645 IPR005218 Diacylglycerol/lipid kinase BED35_16645 IPR016064 ATP-NAD kinase-like domain BED35_16645 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 BED35_16645 IPR022433 Lipid kinase YegS BED35_16650 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor BED35_16655 IPR004702 Phosphotransferease, sorbitol phosphotransferase enzyme II BED35_16655 IPR011618 Sorbitol phosphotransferase enzyme II, N-terminal BED35_16655 IPR011638 Sorbitol phosphotransferase enzyme II, C-terminal BED35_16660 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component BED35_16660 IPR036665 BED35_16660 BED35_16665 IPR002347 Glucose/ribitol dehydrogenase BED35_16665 IPR020904 Short-chain dehydrogenase/reductase, conserved site BED35_16665 IPR036291 BED35_16665 BED35_16670 IPR009693 Glucitol operon activator BED35_16675 IPR001034 HTH DeoR N-terminal domain BED35_16675 IPR014036 DeoR C-terminal sensor domain BED35_16675 IPR018356 Transcription regulator, HTH DeoR-type, conserved site BED35_16675 IPR036388 BED35_16675 BED35_16675 IPR036390 BED35_16675 BED35_16675 IPR037171 BED35_16675 BED35_16680 IPR000644 CBS domain BED35_16680 IPR001347 Sugar isomerase (SIS) BED35_16680 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type BED35_16685 IPR014453 Inhibitor of vertebrate lysozyme BED35_16685 IPR036501 BED35_16685 BED35_16695 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase BED35_16695 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase BED35_16695 IPR029056 Ribokinase-like BED35_16710 IPR005564 Major head protein GpE BED35_16725 IPR001207 Transposase, mutator type BED35_16750 IPR006118 Recombinase, conserved site BED35_16755 IPR002104 Integrase, catalytic BED35_16755 IPR011010 DNA breaking-rejoining enzyme, catalytic core BED35_16755 IPR013762 Integrase-like, catalytic core BED35_16765 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED35_16765 IPR003346 Transposase, IS116/IS110/IS902 BED35_16770 IPR009056 Cytochrome c-like domain BED35_16770 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit BED35_16770 IPR036909 BED35_16770 BED35_16780 IPR024651 FAD-containing D-sorbitol dehydrogenase small subunit BED35_16790 IPR001674 GMP synthase, C-terminal BED35_16790 IPR004739 GMP synthase, N-terminal BED35_16790 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED35_16790 IPR017926 Glutamine amidotransferase BED35_16790 IPR022310 NAD/GMP synthase BED35_16790 IPR022955 GMP synthase BED35_16790 IPR029062 Class I glutamine amidotransferase-like BED35_16795 IPR000644 CBS domain BED35_16795 IPR001093 IMP dehydrogenase/GMP reductase BED35_16795 IPR005990 Inosine-5'-monophosphate dehydrogenase BED35_16795 IPR013785 Aldolase-type TIM barrel BED35_16795 IPR015875 IMP dehydrogenase / GMP reductase, conserved site BED35_16800 IPR003753 Exonuclease VII, large subunit BED35_16800 IPR020579 Exonuclease VII, large subunit, C-terminal BED35_16800 IPR025824 OB-fold nucleic acid binding domain BED35_16805 IPR010807 Protein of unknown function DUF1407 BED35_16805 IPR029037 YfgJ-like BED35_16810 IPR004776 Auxin efflux carrier BED35_16815 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED35_16815 IPR003346 Transposase, IS116/IS110/IS902 BED35_16820 IPR003593 AAA+ ATPase domain BED35_16820 IPR005225 Small GTP-binding protein domain BED35_16820 IPR006073 GTP binding domain BED35_16820 IPR015946 K homology domain-like, alpha/beta BED35_16820 IPR016484 GTP-binding protein EngA BED35_16820 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_16820 IPR032859 BED35_16820 BED35_16830 IPR002372 Pyrrolo-quinoline quinone repeat BED35_16830 IPR011047 Quinonprotein alcohol dehydrogenase-like superfamily BED35_16830 IPR015943 WD40/YVTN repeat-like-containing domain BED35_16830 IPR017687 Outer membrane protein assembly factor BamB BED35_16830 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BED35_16840 IPR004154 Anticodon-binding BED35_16840 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit BED35_16840 IPR015807 Histidine-tRNA ligase BED35_16840 IPR036621 BED35_16840 BED35_16845 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type BED35_16845 IPR011005 Dihydropteroate synthase-like BED35_16845 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial BED35_16845 IPR036849 BED35_16845 BED35_16850 IPR001387 Cro/C1-type helix-turn-helix domain BED35_16850 IPR010982 Lambda repressor-like, DNA-binding domain BED35_16850 IPR023690 Cytoskeleton protein RodZ BED35_16850 IPR025194 Domain of unknown function DUF4115 BED35_16855 IPR011990 Tetratricopeptide-like helical domain BED35_16855 IPR013360 Pilus biogenesis/stability type IV, PilW BED35_16855 IPR019734 Tetratricopeptide repeat BED35_16860 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr BED35_16860 IPR007197 Radical SAM BED35_16860 IPR013785 Aldolase-type TIM barrel BED35_16860 IPR027492 Dual-specificity RNA methyltransferase RlmN BED35_16865 IPR001564 Nucleoside diphosphate kinase BED35_16865 IPR023005 Nucleoside diphosphate kinase, active site BED35_16865 IPR034907 BED35_16865 BED35_16865 IPR036850 BED35_16865 BED35_16875 IPR001264 Glycosyl transferase, family 51 BED35_16875 IPR001460 Penicillin-binding protein, transpeptidase BED35_16875 IPR009647 Penicillin-binding, C-terminal BED35_16875 IPR011815 Penicillin-binding protein 1C BED35_16875 IPR012338 Beta-lactamase/transpeptidase-like BED35_16875 IPR023346 Lysozyme-like domain BED35_16875 IPR036950 BED35_16875 BED35_16880 IPR001599 Alpha-2-macroglobulin BED35_16880 IPR002890 Alpha-2-macroglobulin, N-terminal BED35_16880 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid BED35_16880 IPR011625 Alpha-2-macroglobulin, N-terminal 2 BED35_16880 IPR019565 Alpha-2-macroglobulin, thiol-ester bond-forming BED35_16880 IPR026284 Alpha-2-macroglobulin domain protein, bacteria BED35_16885 IPR003991 Pertactin virulence factor family BED35_16885 IPR004899 Pertactin, central region BED35_16885 IPR005546 Autotransporter beta-domain BED35_16885 IPR006315 Outer membrane autotransporter barrel BED35_16885 IPR011050 Pectin lyase fold/virulence factor BED35_16885 IPR012332 P22 tailspike C-terminal domain-like BED35_16885 IPR036709 BED35_16885 BED35_16890 IPR009839 SseB protein N-terminal domain BED35_16890 IPR027945 SseB protein, C-terminal BED35_16895 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal BED35_16895 IPR008330 Peptidase M17, peptidase B BED35_16895 IPR011356 Leucine aminopeptidase/peptidase B BED35_16900 IPR007479 ISC system FeS cluster assembly, IscX BED35_16900 IPR036762 BED35_16900 BED35_16905 IPR001041 2Fe-2S ferredoxin-type domain BED35_16905 IPR001055 Adrenodoxin BED35_16905 IPR011536 Ferredoxin, 2Fe-2S type BED35_16905 IPR012675 Beta-grasp domain BED35_16905 IPR018298 Adrenodoxin, iron-sulphur binding site BED35_16905 IPR036010 BED35_16905 BED35_16910 IPR010236 ISC system FeS cluster assembly, HscA chaperone BED35_16910 IPR013126 Heat shock protein 70 family BED35_16910 IPR018181 Heat shock protein 70, conserved site BED35_16910 IPR029047 Heat shock protein 70kD, peptide-binding domain BED35_16910 IPR029048 Heat shock protein 70kD, C-terminal domain BED35_16915 IPR001623 DnaJ domain BED35_16915 IPR004640 Co-chaperone Hsc20 BED35_16915 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain BED35_16915 IPR036386 BED35_16915 BED35_16915 IPR036869 BED35_16915 BED35_16920 IPR000361 FeS cluster biogenesis BED35_16920 IPR011302 ISC system FeS cluster assembly, IscA scaffold BED35_16920 IPR016092 FeS cluster insertion protein BED35_16920 IPR017870 FeS cluster insertion, C-terminal, conserved site BED35_16920 IPR035903 BED35_16920 BED35_16925 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal BED35_16925 IPR011339 ISC system FeS cluster assembly, IscU scaffold BED35_16930 IPR000192 Aminotransferase class V domain BED35_16930 IPR010240 Cysteine desulfurase BED35_16930 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BED35_16930 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 BED35_16930 IPR015424 Pyridoxal phosphate-dependent transferase BED35_16930 IPR016454 Cysteine desulfurase, NifS BED35_16930 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site BED35_16935 IPR000944 Transcription regulator Rrf2-like BED35_16935 IPR010242 Transcription factor HTH, IscR BED35_16935 IPR030489 BED35_16935 BED35_16935 IPR036388 BED35_16935 BED35_16935 IPR036390 BED35_16935 BED35_16940 IPR001537 tRNA/rRNA methyltransferase, SpoU type BED35_16940 IPR004384 RNA methyltransferase TrmH, group 1 BED35_16940 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BED35_16940 IPR029028 Alpha/beta knot methyltransferases BED35_16945 IPR000760 Inositol monophosphatase BED35_16945 IPR020550 Inositol monophosphatase, conserved site BED35_16945 IPR020583 Inositol monophosphatase, metal-binding site BED35_16945 IPR022337 Inositol monophosphatase, SuhB BED35_16950 IPR011541 Nickel/cobalt transporter, high-affinity BED35_16955 IPR010412 Protein of unknown function DUF1007 BED35_16955 IPR016537 Uncharacterised conserved protein UCP008159, BED35_16965 IPR024989 Major facilitator superfamily associated domain BED35_16965 IPR026032 Phenylproprionate/maltose permease BED35_16965 IPR036259 BED35_16965 BED35_16970 IPR001085 Serine hydroxymethyltransferase BED35_16970 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BED35_16970 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 BED35_16970 IPR015424 Pyridoxal phosphate-dependent transferase BED35_16970 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site BED35_16970 IPR039429 BED35_16970 BED35_16975 IPR000971 Globin BED35_16975 IPR001221 Phenol hydroxylase reductase BED35_16975 IPR001433 Oxidoreductase FAD/NAD(P)-binding BED35_16975 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase BED35_16975 IPR008333 Oxidoreductase, FAD-binding domain BED35_16975 IPR009050 Globin-like BED35_16975 IPR012292 Globin, structural domain BED35_16975 IPR017938 Riboflavin synthase-like beta-barrel BED35_16975 IPR023950 Flavohemoprotein BED35_16975 IPR039261 BED35_16975 BED35_16980 IPR032791 BED35_16980 BED35_16980 IPR036388 BED35_16980 BED35_16980 IPR036390 BED35_16980 BED35_16985 IPR011608 PRD domain BED35_16985 IPR036634 BED35_16985 BED35_16990 IPR001608 Alanine racemase, N-terminal BED35_16990 IPR029066 PLP-binding barrel BED35_16995 IPR001559 Aryldialkylphosphatase BED35_16995 IPR032466 BED35_16995 BED35_17000 IPR021238 Protein of unknown function DUF2620 BED35_17010 IPR002187 Nitrogen regulatory protein PII BED35_17010 IPR002332 Nitrogen regulatory protein P-II, urydylation site BED35_17010 IPR011322 Nitrogen regulatory PII-like, alpha/beta BED35_17010 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BED35_17010 IPR017918 Nitrogen regulatory protein PII, conserved site BED35_17015 IPR000132 Nitrilase/cyanide hydratase, conserved site BED35_17015 IPR003010 Carbon-nitrogen hydrolase BED35_17015 IPR003694 NAD(+) synthetase BED35_17015 IPR014445 Glutamine-dependent NAD(+) synthetase BED35_17015 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED35_17015 IPR022310 NAD/GMP synthase BED35_17015 IPR036526 BED35_17015 BED35_17020 IPR001789 Signal transduction response regulator, receiver domain BED35_17020 IPR002078 RNA polymerase sigma factor 54 interaction domain BED35_17020 IPR003593 AAA+ ATPase domain BED35_17020 IPR009057 Homeodomain-like BED35_17020 IPR011006 CheY-like superfamily BED35_17020 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BED35_17020 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BED35_17020 IPR025944 Sigma-54 interaction domain, conserved site BED35_17020 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_17025 IPR025262 Quorum-sensing regulator protein G BED35_17030 IPR003594 Histidine kinase-like ATPase, C-terminal domain BED35_17030 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain BED35_17030 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BED35_17030 IPR036097 BED35_17030 BED35_17030 IPR036890 BED35_17030 BED35_17040 IPR010073 Phosphoribosylformylglycinamidine synthase BED35_17040 IPR010918 AIR synthase-related protein, C-terminal domain BED35_17040 IPR029062 Class I glutamine amidotransferase-like BED35_17040 IPR036604 BED35_17040 BED35_17040 IPR036676 BED35_17040 BED35_17040 IPR036921 BED35_17040 BED35_17045 IPR000189 Prokaryotic transglycosylase, active site BED35_17045 IPR001638 Extracellular solute-binding protein, family 3 BED35_17045 IPR008258 Lytic transglycosylase-like SLT domain BED35_17045 IPR023346 Lysozyme-like domain BED35_17045 IPR023703 Membrane-bound lytic murein transglycosylase F BED35_17050 IPR016192 APOBEC/CMP deaminase, zinc-binding BED35_17050 IPR016193 Cytidine deaminase-like BED35_17050 IPR028883 tRNA-specific adenosine deaminase BED35_17055 IPR018677 Protein of unknown function DUF2157, membrane BED35_17060 IPR006435 HAD-superfamily hydrolase, subfamily IF, YfhB BED35_17060 IPR023214 HAD-like domain BED35_17060 IPR036412 BED35_17060 BED35_17065 IPR001347 Sugar isomerase (SIS) BED35_17065 IPR005486 Glucokinase regulatory protein, conserved site BED35_17065 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ BED35_17070 IPR000281 Helix-turn-helix protein RpiR BED35_17070 IPR001347 Sugar isomerase (SIS) BED35_17070 IPR009057 Homeodomain-like BED35_17070 IPR036388 BED35_17070 BED35_17075 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BED35_17075 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BED35_17085 IPR002582 Holo-[acyl carrier protein] synthase BED35_17085 IPR004568 Phosphopantethiene-protein transferase domain BED35_17085 IPR008278 4'-phosphopantetheinyl transferase superfamily BED35_17085 IPR037143 BED35_17085 BED35_17090 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ BED35_17090 IPR013785 Aldolase-type TIM barrel BED35_17090 IPR036130 BED35_17090 BED35_17095 IPR003717 Recombination protein O, RecO BED35_17095 IPR012340 Nucleic acid-binding, OB-fold BED35_17095 IPR022572 DNA replication/recombination mediator RecO, N-terminal BED35_17095 IPR037278 BED35_17095 BED35_17100 IPR004044 K Homology domain, type 2 BED35_17100 IPR005225 Small GTP-binding protein domain BED35_17100 IPR005662 GTP-binding protein Era BED35_17100 IPR006073 GTP binding domain BED35_17100 IPR009019 K homology domain, prokaryotic type BED35_17100 IPR015946 K homology domain-like, alpha/beta BED35_17100 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_17105 IPR000999 Ribonuclease III domain BED35_17105 IPR011907 Ribonuclease III BED35_17105 IPR014720 Double-stranded RNA-binding domain BED35_17105 IPR036389 BED35_17105 BED35_17110 IPR000223 Peptidase S26A, signal peptidase I BED35_17110 IPR015927 Peptidase S24/S26A/S26B/S26C BED35_17110 IPR019533 Peptidase S26 BED35_17110 IPR019756 Peptidase S26A, signal peptidase I, serine active site BED35_17110 IPR019757 Peptidase S26A, signal peptidase I, lysine active site BED35_17110 IPR019758 Peptidase S26A, signal peptidase I, conserved site BED35_17110 IPR036286 BED35_17110 BED35_17115 IPR000640 Translation elongation factor EFG, V domain BED35_17115 IPR000795 Elongation factor, GTP-binding domain BED35_17115 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 BED35_17115 IPR005225 Small GTP-binding protein domain BED35_17115 IPR006297 Elongation factor 4 BED35_17115 IPR013842 GTP-binding protein LepA, C-terminal BED35_17115 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_17115 IPR031157 BED35_17115 BED35_17115 IPR035647 BED35_17115 BED35_17115 IPR038363 BED35_17115 BED35_17125 IPR026268 Protein RseC BED35_17130 IPR005588 MucB/RseB BED35_17130 IPR033434 BED35_17130 BED35_17130 IPR033436 BED35_17130 BED35_17130 IPR038484 BED35_17130 BED35_17135 IPR005572 Anti sigma-E protein RseA, N-terminal BED35_17135 IPR005573 Anti sigma-E protein RseA, C-terminal BED35_17135 IPR026279 Sigma-E factor negative regulatory protein RseA BED35_17135 IPR036147 BED35_17135 BED35_17140 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site BED35_17140 IPR007627 RNA polymerase sigma-70 region 2 BED35_17140 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 BED35_17140 IPR013324 RNA polymerase sigma factor, region 3/4 BED35_17140 IPR013325 RNA polymerase sigma factor, region 2 BED35_17140 IPR014284 RNA polymerase sigma-70 like domain BED35_17140 IPR014286 RNA polymerase sigma-70 RpoE type BED35_17140 IPR036388 BED35_17140 BED35_17145 IPR003953 FAD binding domain BED35_17145 IPR005288 L-aspartate oxidase BED35_17145 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal BED35_17145 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain BED35_17145 IPR036188 BED35_17145 BED35_17145 IPR037099 BED35_17145 BED35_17150 IPR002052 DNA methylase, N-6 adenine-specific, conserved site BED35_17150 IPR007848 Methyltransferase small domain BED35_17150 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase BED35_17150 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BED35_17155 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site BED35_17155 IPR001650 Helicase, C-terminal BED35_17155 IPR011545 DEAD/DEAH box helicase domain BED35_17155 IPR014001 Helicase, superfamily 1/2, ATP-binding domain BED35_17155 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_17155 IPR028621 ATP-dependent RNA helicase SrmB BED35_17160 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED35_17160 IPR003346 Transposase, IS116/IS110/IS902 BED35_17165 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED35_17165 IPR003346 Transposase, IS116/IS110/IS902 BED35_17170 IPR002110 Ankyrin repeat BED35_17170 IPR020683 Ankyrin repeat-containing domain BED35_17170 IPR036770 BED35_17170 BED35_17185 IPR001150 Glycine radical domain BED35_17185 IPR011140 Autonomous glycyl radical cofactor GrcA BED35_17185 IPR019777 Formate C-acetyltransferase glycine radical, conserved site BED35_17190 IPR002043 Uracil-DNA glycosylase BED35_17190 IPR005122 Uracil-DNA glycosylase-like BED35_17190 IPR018085 Uracil-DNA glycosylase, active site BED35_17190 IPR036895 BED35_17190 BED35_17195 IPR000740 GrpE nucleotide exchange factor BED35_17195 IPR009012 GrpE nucleotide exchange factor, head BED35_17195 IPR013805 GrpE nucleotide exchange factor, coiled-coil BED35_17200 IPR002504 Inorganic polyphosphate/ATP-NAD kinase BED35_17200 IPR016064 ATP-NAD kinase-like domain BED35_17200 IPR017437 ATP-NAD kinase, PpnK-type, all-beta BED35_17200 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 BED35_17205 IPR003395 RecF/RecN/SMC, N-terminal BED35_17205 IPR004604 DNA recombination/repair protein RecN BED35_17205 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_17210 IPR007450 Lipoprotein SmpA/OmlA BED35_17210 IPR026592 Outer membrane protein assembly factor BamE BED35_17210 IPR037873 BED35_17210 BED35_17215 IPR005346 RnfH protein BED35_17215 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp BED35_17215 IPR037021 BED35_17215 BED35_17220 IPR005031 Streptomyces cyclase/dehydrase BED35_17220 IPR023393 START-like domain BED35_17225 IPR000037 SsrA-binding protein BED35_17225 IPR020081 SsrA-binding protein, conserved site BED35_17225 IPR023620 Small protein B BED35_17240 IPR002645 STAS domain BED35_17240 IPR011547 Sulphate transporter BED35_17240 IPR036513 BED35_17240 BED35_17245 IPR006879 Uncharacterised protein family UPF0249/HpnK BED35_17245 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel BED35_17245 IPR022948 Uncharacterised protein family UPF0249 BED35_17250 IPR009057 Homeodomain-like BED35_17250 IPR011051 RmlC-like cupin domain BED35_17250 IPR013096 Cupin 2, conserved barrel BED35_17250 IPR014710 RmlC-like jelly roll fold BED35_17250 IPR018060 DNA binding HTH domain, AraC-type BED35_17250 IPR018062 HTH domain AraC-type, conserved site BED35_17250 IPR020449 Transcription regulator HTH, AraC- type BED35_17255 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit BED35_17255 IPR036542 BED35_17255 BED35_17260 IPR001360 Glycoside hydrolase, family 1 BED35_17260 IPR017853 Glycoside hydrolase, superfamily BED35_17260 IPR018120 Glycoside hydrolase, family 1, active site BED35_17265 IPR003352 Phosphotransferase system, EIIC BED35_17265 IPR004501 Phosphotransferase system, EIIC component, type 3 BED35_17265 IPR004796 Phosphotransferase system, cellobiose-type IIC component BED35_17270 IPR003501 Phosphotransferase system, EIIB component, type 2/3 BED35_17270 IPR036095 BED35_17270 BED35_17280 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED35_17280 IPR003346 Transposase, IS116/IS110/IS902 BED35_17285 IPR023210 NADP-dependent oxidoreductase domain BED35_17285 IPR036812 BED35_17285 BED35_17290 IPR003691 Putative fluoride ion transporter CrcB BED35_17295 IPR003691 Putative fluoride ion transporter CrcB BED35_17300 IPR003148 Regulator of K+ conductance, N-terminal BED35_17300 IPR013099 Two pore domain potassium channel domain BED35_17300 IPR028325 Voltage-gated potassium channel BED35_17300 IPR036291 BED35_17300 BED35_17305 IPR010486 HNS-dependent expression A/B BED35_17305 IPR028623 HNS-dependent expression B BED35_17305 IPR036831 BED35_17305 BED35_17305 IPR038303 BED35_17305 BED35_17310 IPR004688 Nickel/cobalt transporter, high-affinity, bacteria BED35_17310 IPR011541 Nickel/cobalt transporter, high-affinity BED35_17315 IPR004937 Urea transporter BED35_17315 IPR017807 Urea transporter, bacteria BED35_17315 IPR029020 Ammonium/urea transporter BED35_17320 IPR002669 Urease accessory protein UreD BED35_17325 IPR003495 CobW/HypB/UreG domain BED35_17325 IPR004400 Urease accessory protein UreG BED35_17325 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase BED35_17325 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_17330 IPR002639 Urease accessory protein UreF BED35_17330 IPR038277 BED35_17330 BED35_17335 IPR004029 UreE urease accessory, N-terminal BED35_17335 IPR007864 Urease accessory protein UreE, C-terminal domain BED35_17335 IPR012406 Urease accessory protein UreE BED35_17335 IPR036118 BED35_17335 BED35_17340 IPR005848 Urease, alpha subunit BED35_17340 IPR006680 Amidohydrolase 1 BED35_17340 IPR011059 Metal-dependent hydrolase, composite domain BED35_17340 IPR011612 Urease alpha-subunit, N-terminal domain BED35_17340 IPR017950 Urease active site BED35_17340 IPR029754 Urease nickel binding site BED35_17340 IPR032466 BED35_17340 BED35_17345 IPR002019 Urease, beta subunit BED35_17345 IPR036461 BED35_17345 BED35_17350 IPR002026 Urease, gamma/gamma-beta subunit BED35_17350 IPR012010 Urease, gamma subunit BED35_17350 IPR036463 BED35_17350 BED35_17355 IPR003439 ABC transporter-like BED35_17355 IPR003593 AAA+ ATPase domain BED35_17355 IPR017871 ABC transporter, conserved site BED35_17355 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_17360 IPR003439 ABC transporter-like BED35_17360 IPR003593 AAA+ ATPase domain BED35_17360 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_17365 IPR000515 MetI-like domain BED35_17365 IPR035906 BED35_17365 BED35_17370 IPR000515 MetI-like domain BED35_17370 IPR035906 BED35_17370 BED35_17375 IPR000914 Bacterial extracellular solute-binding protein, family 5 BED35_17375 IPR030678 BED35_17375 BED35_17390 IPR001307 Thiosulphate sulfurtransferase, conserved site BED35_17390 IPR001763 Rhodanese-like domain BED35_17390 IPR036873 BED35_17390 BED35_17400 IPR009057 Homeodomain-like BED35_17400 IPR018060 DNA binding HTH domain, AraC-type BED35_17405 IPR002059 Cold-shock protein, DNA-binding BED35_17405 IPR011129 Cold shock protein BED35_17405 IPR012156 Cold shock, CspA BED35_17405 IPR012340 Nucleic acid-binding, OB-fold BED35_17405 IPR019844 Cold-shock conserved site BED35_17410 IPR006983 MbeD/MobD-like BED35_17420 IPR018994 Protein of unknown function DUF2002 BED35_17425 IPR011701 Major facilitator superfamily BED35_17425 IPR023008 Uncharacterised protein family UPF0226, major facilitator superfamily BED35_17425 IPR036259 BED35_17425 BED35_17430 IPR009057 Homeodomain-like BED35_17430 IPR018060 DNA binding HTH domain, AraC-type BED35_17435 IPR005065 Platelet-activating factor acetylhydrolase BED35_17435 IPR029058 Alpha/Beta hydrolase fold BED35_17440 IPR009435 Acid shock BED35_17440 IPR023497 Acid shock protein BED35_17445 IPR010279 Protein of unknown function DUF883, ElaB BED35_17450 IPR000524 Transcription regulator HTH, GntR BED35_17450 IPR004839 Aminotransferase, class I/classII BED35_17450 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BED35_17450 IPR015424 Pyridoxal phosphate-dependent transferase BED35_17450 IPR036388 BED35_17450 BED35_17450 IPR036390 BED35_17450 BED35_17455 IPR003779 Carboxymuconolactone decarboxylase-like BED35_17455 IPR004675 Alkylhydroperoxidase AhpD core BED35_17455 IPR029032 AhpD-like BED35_17460 IPR002109 Glutaredoxin BED35_17460 IPR011909 Glutaredoxin-like protein NrdH BED35_17460 IPR036249 BED35_17460 BED35_17465 IPR004465 Ribonucleotide reductase Class Ib, NrdI BED35_17465 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial BED35_17465 IPR029039 Flavoprotein-like BED35_17470 IPR000788 Ribonucleotide reductase large subunit, C-terminal BED35_17470 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal BED35_17470 IPR013346 Ribonucleotide reductase, class I , alpha subunit BED35_17470 IPR013509 Ribonucleotide reductase large subunit, N-terminal BED35_17470 IPR013554 Ribonucleotide reductase N-terminal BED35_17470 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE BED35_17475 IPR000358 Ribonucleotide reductase small subunit BED35_17475 IPR009078 Ferritin-like superfamily BED35_17475 IPR012348 Ribonucleotide reductase-related BED35_17475 IPR026494 Ribonucleoside reductase subunit beta, NrdF BED35_17475 IPR030475 BED35_17475 BED35_17480 IPR000644 CBS domain BED35_17480 IPR003439 ABC transporter-like BED35_17480 IPR003593 AAA+ ATPase domain BED35_17480 IPR005892 Glycine betaine transport ATP-binding subunit BED35_17480 IPR017871 ABC transporter, conserved site BED35_17480 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_17485 IPR000515 MetI-like domain BED35_17485 IPR035906 BED35_17485 BED35_17490 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain BED35_17500 IPR006054 DNA polymerase III, epsilon subunit BED35_17500 IPR006309 DNA polymerase 3, epsilon subunit BED35_17500 IPR012337 Ribonuclease H-like domain BED35_17500 IPR013520 Exonuclease, RNase T/DNA polymerase III BED35_17500 IPR036397 BED35_17500 BED35_17505 IPR002156 Ribonuclease H domain BED35_17505 IPR012337 Ribonuclease H-like domain BED35_17505 IPR022892 Ribonuclease H BED35_17505 IPR036397 BED35_17505 BED35_17510 IPR013216 Methyltransferase type 11 BED35_17510 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BED35_17515 IPR001279 Beta-lactamase-like BED35_17515 IPR017782 Hydroxyacylglutathione hydrolase BED35_17515 IPR032282 BED35_17515 BED35_17515 IPR036866 BED35_17515 BED35_17520 IPR000189 Prokaryotic transglycosylase, active site BED35_17520 IPR008258 Lytic transglycosylase-like SLT domain BED35_17520 IPR018392 LysM domain BED35_17520 IPR023346 Lysozyme-like domain BED35_17520 IPR036779 BED35_17520 BED35_17525 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED35_17525 IPR003346 Transposase, IS116/IS110/IS902 BED35_17530 IPR005135 Endonuclease/exonuclease/phosphatase BED35_17530 IPR036691 BED35_17530 BED35_17535 IPR011701 Major facilitator superfamily BED35_17535 IPR036259 BED35_17535 BED35_17540 IPR000847 Transcription regulator HTH, LysR BED35_17540 IPR005119 LysR, substrate-binding BED35_17540 IPR036388 BED35_17540 BED35_17540 IPR036390 BED35_17540 BED35_17545 IPR018170 Aldo/keto reductase, conserved site BED35_17545 IPR020471 Aldo/keto reductase subgroup BED35_17545 IPR023210 NADP-dependent oxidoreductase domain BED35_17545 IPR036812 BED35_17545 BED35_17555 IPR001207 Transposase, mutator type BED35_17595 IPR003439 ABC transporter-like BED35_17595 IPR003593 AAA+ ATPase domain BED35_17595 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria BED35_17595 IPR017871 ABC transporter, conserved site BED35_17595 IPR018449 NIL domain BED35_17595 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_17600 IPR000515 MetI-like domain BED35_17600 IPR035906 BED35_17600 BED35_17605 IPR004872 Lipoprotein NlpA family BED35_17610 IPR030852 BED35_17610 BED35_17615 IPR023368 Uncharacterised protein family UPF0066, conserved site BED35_17615 IPR023370 TsaA-like domain BED35_17615 IPR036413 BED35_17615 BED35_17615 IPR036414 BED35_17615 BED35_17620 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain BED35_17620 IPR002316 Proline-tRNA ligase, class IIa BED35_17620 IPR004154 Anticodon-binding BED35_17620 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type BED35_17620 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain BED35_17620 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 BED35_17620 IPR036621 BED35_17620 BED35_17620 IPR036754 BED35_17620 BED35_17625 IPR007298 Copper resistance lipoprotein NlpE BED35_17625 IPR033450 BED35_17625 BED35_17625 IPR038139 BED35_17625 BED35_17630 IPR000352 Peptide chain release factor class I/class II BED35_17635 IPR009822 YaeQ BED35_17635 IPR011335 Restriction endonuclease type II-like BED35_17635 IPR038590 BED35_17635 BED35_17645 IPR009778 Modulator of Rho-dependent transcription termination BED35_17645 IPR023534 Rof/RNase P-like BED35_17645 IPR038626 BED35_17645 BED35_17650 IPR008168 Cytochrome c, class IC BED35_17650 IPR009056 Cytochrome c-like domain BED35_17650 IPR036909 BED35_17650 BED35_17655 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase BED35_17655 IPR012094 Lysidine-tRNA(Ile) synthetase BED35_17655 IPR012795 Lysidine-tRNA(Ile) synthetase, N-terminal BED35_17655 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal BED35_17655 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED35_17655 IPR015262 Lysidine-tRNA(Ile) synthetase, substrate-binding domain BED35_17660 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BED35_17660 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BED35_17665 IPR000310 Orn/Lys/Arg decarboxylase, major domain BED35_17665 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal BED35_17665 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal BED35_17665 IPR011193 Ornithine/lysine/arginine decarboxylase BED35_17665 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BED35_17665 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 BED35_17665 IPR015424 Pyridoxal phosphate-dependent transferase BED35_17665 IPR036633 BED35_17665 BED35_17670 IPR001095 Acetyl-CoA carboxylase, alpha subunit BED35_17670 IPR029045 ClpP/crotonase-like domain BED35_17675 IPR003141 Polymerase/histidinol phosphatase, N-terminal BED35_17675 IPR004013 PHP, C-terminal BED35_17675 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type BED35_17675 IPR004805 DNA polymerase III, alpha subunit BED35_17675 IPR011708 Bacterial DNA polymerase III, alpha subunit BED35_17675 IPR016195 Polymerase/histidinol phosphatase-like BED35_17675 IPR029460 DNA polymerase, helix-hairpin-helix motif BED35_17680 IPR012337 Ribonuclease H-like domain BED35_17680 IPR022898 Ribonuclease HII BED35_17680 IPR024567 Ribonuclease HII/HIII domain BED35_17680 IPR036397 BED35_17680 BED35_17685 IPR003835 Glycosyl transferase, family 19 BED35_17695 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ BED35_17695 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ BED35_17695 IPR029069 HotDog domain BED35_17700 IPR001451 Bacterial transferase hexapeptide repeat BED35_17700 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase BED35_17700 IPR011004 Trimeric LpxA-like BED35_17700 IPR018357 Hexapeptide transferase, conserved site BED35_17700 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region BED35_17705 IPR005632 Chaperone protein Skp BED35_17705 IPR024930 Skp domain BED35_17710 IPR000184 Bacterial surface antigen (D15) BED35_17710 IPR010827 Surface antigen variable number BED35_17710 IPR023707 Outer membrane protein assembly factor BamA BED35_17715 IPR001478 PDZ domain BED35_17715 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase BED35_17715 IPR008915 Peptidase M50 BED35_17715 IPR036034 BED35_17715 BED35_17720 IPR000374 Phosphatidate cytidylyltransferase BED35_17725 IPR001441 Decaprenyl diphosphate synthase-like BED35_17725 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site BED35_17725 IPR036424 BED35_17725 BED35_17730 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase BED35_17730 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal BED35_17730 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal BED35_17730 IPR026877 DXP reductoisomerase C-terminal domain BED35_17730 IPR036169 BED35_17730 BED35_17730 IPR036291 BED35_17730 BED35_17735 IPR002661 Ribosome recycling factor BED35_17735 IPR023584 Ribosome recycling factor domain BED35_17735 IPR036191 BED35_17735 BED35_17740 IPR001048 Aspartate/glutamate/uridylate kinase BED35_17740 IPR011817 Uridylate kinase BED35_17740 IPR015963 Uridylate kinase, bacteria BED35_17740 IPR036393 BED35_17740 BED35_17745 IPR001816 Translation elongation factor EFTs/EF1B BED35_17745 IPR009060 UBA-like BED35_17745 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation BED35_17745 IPR018101 Translation elongation factor Ts, conserved site BED35_17745 IPR036402 BED35_17745 BED35_17750 IPR001865 Ribosomal protein S2 BED35_17750 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid BED35_17750 IPR018130 Ribosomal protein S2, conserved site BED35_17750 IPR023591 Ribosomal protein S2, flavodoxin-like domain BED35_17760 IPR002912 ACT domain BED35_17760 IPR002934 Nucleotidyl transferase domain BED35_17760 IPR003607 HD/PDEase domain BED35_17760 IPR006674 HD domain BED35_17760 IPR010043 Protein-PII uridylyltransferase BED35_17760 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase BED35_17765 IPR001451 Bacterial transferase hexapeptide repeat BED35_17765 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family BED35_17765 IPR011004 Trimeric LpxA-like BED35_17765 IPR018357 Hexapeptide transferase, conserved site BED35_17765 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 BED35_17765 IPR037133 BED35_17765 BED35_17770 IPR020911 Uncharacterised protein family UPF0325 BED35_17775 IPR001094 Flavodoxin BED35_17775 IPR008254 Flavodoxin/nitric oxide synthase BED35_17775 IPR029039 Flavoprotein-like BED35_17780 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F BED35_17780 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site BED35_17780 IPR020103 Pseudouridine synthase, catalytic domain BED35_17785 IPR007384 Protein of unknown function UCP006257 BED35_17785 IPR023376 YqcC-like domain BED35_17785 IPR036814 BED35_17785 BED35_17790 IPR009948 Syd BED35_17790 IPR038228 BED35_17790 BED35_17795 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 BED35_17795 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal BED35_17795 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF BED35_17800 IPR021826 Protein of unknown function DUF3412 BED35_17800 IPR027820 Domain of unknown function DUF4478 BED35_17800 IPR031100 BED35_17800 BED35_17800 IPR037153 BED35_17800 BED35_17805 IPR002421 5'-3' exonuclease, N-terminal BED35_17805 IPR008918 Helix-hairpin-helix motif, class 2 BED35_17805 IPR020045 5'-3' exonuclease, C-terminal domain BED35_17805 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal BED35_17805 IPR022895 Flap endonuclease Xni BED35_17805 IPR029060 PIN domain-like BED35_17805 IPR036279 BED35_17805 BED35_17810 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED35_17810 IPR003346 Transposase, IS116/IS110/IS902 BED35_17815 IPR002877 Ribosomal RNA methyltransferase FtsJ domain BED35_17815 IPR011224 Ribosomal RNA large subunit methyltransferase M BED35_17815 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BED35_17820 IPR006696 Protein of unknown function DUF423 BED35_17825 IPR000847 Transcription regulator HTH, LysR BED35_17825 IPR005119 LysR, substrate-binding BED35_17825 IPR036388 BED35_17825 BED35_17825 IPR036390 BED35_17825 BED35_17830 IPR010305 Protein of unknown function DUF903 BED35_17830 IPR010920 Like-Sm (LSM) domain BED35_17835 IPR000192 Aminotransferase class V domain BED35_17835 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BED35_17835 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 BED35_17835 IPR015424 Pyridoxal phosphate-dependent transferase BED35_17835 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site BED35_17835 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA BED35_17840 IPR003808 Fe-S metabolism associated domain, SufE-like BED35_17840 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE BED35_17845 IPR000594 UBA/THIF-type NAD/FAD binding fold BED35_17845 IPR035985 BED35_17845 BED35_17850 IPR005300 Lytic transglycosylase MltA BED35_17850 IPR010611 3D domain BED35_17850 IPR026044 Membrane-bound lytic murein transglycosylase A BED35_17850 IPR036908 BED35_17850 BED35_17870 IPR002508 Cell wall hydrolase/autolysin, catalytic BED35_17870 IPR021731 AMIN domain BED35_17875 IPR000182 GNAT domain BED35_17875 IPR001048 Aspartate/glutamate/uridylate kinase BED35_17875 IPR010167 Amino-acid N-acetyltransferase (ArgA) BED35_17875 IPR016181 Acyl-CoA N-acyltransferase BED35_17875 IPR036393 BED35_17875 BED35_17880 IPR006344 Exodeoxyribonuclease V, alpha subunit BED35_17880 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_17880 IPR027785 UvrD-like helicase C-terminal domain BED35_17885 IPR004586 Exodeoxyribonuclease V, beta subunit BED35_17885 IPR011335 Restriction endonuclease type II-like BED35_17885 IPR011604 Exonuclease, phage-type/RecB, C-terminal BED35_17885 IPR014017 DNA helicase, UvrD-like, C-terminal BED35_17885 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_17885 IPR034739 BED35_17885 BED35_17885 IPR038726 BED35_17885 BED35_17890 IPR001431 Peptidase M16, zinc-binding site BED35_17890 IPR007863 Peptidase M16, C-terminal domain BED35_17890 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like BED35_17890 IPR011765 Peptidase M16, N-terminal BED35_17890 IPR032632 BED35_17890 BED35_17895 IPR006697 Exodeoxyribonuclease V, gamma subunit BED35_17895 IPR011335 Restriction endonuclease type II-like BED35_17895 IPR013986 DExx box DNA helicase domain BED35_17895 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_17900 IPR012902 Prokaryotic N-terminal methylation site BED35_17900 IPR022204 Prepilin peptidase dependent protein C BED35_17905 IPR019652 Protein of unknown function DUF2509 BED35_17910 IPR012902 Prokaryotic N-terminal methylation site BED35_17910 IPR016419 Prepilin peptidase-dependent protein B, predicted BED35_17915 IPR012902 Prokaryotic N-terminal methylation site BED35_17920 IPR000398 Thymidylate synthase BED35_17920 IPR020940 Thymidylate synthase, active site BED35_17920 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain BED35_17920 IPR036926 BED35_17920 BED35_17925 IPR001640 Prolipoprotein diacylglyceryl transferase BED35_17930 IPR000121 PEP-utilising enzyme, C-terminal BED35_17930 IPR003018 GAF domain BED35_17930 IPR006318 Phosphoenolpyruvate-utilising enzyme BED35_17930 IPR008279 PEP-utilising enzyme, mobile domain BED35_17930 IPR008731 Phosphotransferase system, enzyme I N-terminal BED35_17930 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain BED35_17930 IPR018274 PEP-utilising enzyme, active site BED35_17930 IPR023151 PEP-utilising enzyme, conserved site BED35_17930 IPR029016 GAF domain-like BED35_17930 IPR036618 BED35_17930 BED35_17930 IPR036637 BED35_17930 BED35_17945 IPR004230 DNA mismatch repair protein MutH BED35_17945 IPR011335 Restriction endonuclease type II-like BED35_17945 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II BED35_17945 IPR037057 BED35_17945 BED35_17950 IPR005496 Integral membrane protein TerC BED35_17955 IPR023210 NADP-dependent oxidoreductase domain BED35_17955 IPR036812 BED35_17955 BED35_17965 IPR000873 AMP-dependent synthetase/ligase BED35_17965 IPR002123 Phospholipid/glycerol acyltransferase BED35_17965 IPR020845 AMP-binding, conserved site BED35_17965 IPR023775 Bifunctional 2-acylglycerophosphoethanolamine acyltransferase/acyl synthetase Aas BED35_17965 IPR025110 AMP-binding enzyme C-terminal domain BED35_17970 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site BED35_17970 IPR006656 Molybdopterin oxidoreductase BED35_17970 IPR006657 Molydopterin dinucleotide-binding domain BED35_17970 IPR009010 Aspartate decarboxylase-like domain BED35_17975 IPR000843 Transcription regulator HTH, LacI BED35_17975 IPR010982 Lambda repressor-like, DNA-binding domain BED35_17975 IPR028082 Periplasmic binding protein-like I BED35_17980 IPR000183 Ornithine/DAP/Arg decarboxylase BED35_17980 IPR002986 Diaminopimelate decarboxylase, LysA BED35_17980 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal BED35_17980 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal BED35_17980 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal BED35_17980 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site BED35_17980 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site BED35_17980 IPR029066 PLP-binding barrel BED35_17985 IPR000847 Transcription regulator HTH, LysR BED35_17985 IPR005119 LysR, substrate-binding BED35_17985 IPR036388 BED35_17985 BED35_17985 IPR036390 BED35_17985 BED35_17990 IPR011701 Major facilitator superfamily BED35_17990 IPR036259 BED35_17990 BED35_18000 IPR001279 Beta-lactamase-like BED35_18000 IPR036866 BED35_18000 BED35_18005 IPR036249 BED35_18005 BED35_18020 IPR001867 Signal transduction response regulator, C-terminal BED35_18020 IPR016032 Signal transduction response regulator, C-terminal effector BED35_18020 IPR036388 BED35_18020 BED35_18025 IPR019114 Chaperone lipoprotein, PulS/OutS-like BED35_18025 IPR038432 BED35_18025 BED35_18040 IPR007812 Type II secretion system protein L BED35_18040 IPR024230 GspL, cytoplasmic actin-ATPase-like domain BED35_18045 IPR005628 General secretion pathway protein K BED35_18045 IPR038072 BED35_18045 BED35_18050 IPR010055 Type II secretion system protein J BED35_18050 IPR012902 Prokaryotic N-terminal methylation site BED35_18055 IPR003413 Type II secretion system protein I domain BED35_18060 IPR000983 Bacterial general secretion pathway protein G-type pilin BED35_18060 IPR010054 General secretion pathway protein G BED35_18060 IPR012902 Prokaryotic N-terminal methylation site BED35_18060 IPR013545 Type II secretion system protein G BED35_18070 IPR001482 Type II secretion system protein E BED35_18070 IPR003593 AAA+ ATPase domain BED35_18070 IPR013369 Type II secretion system GspE BED35_18070 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_18070 IPR037257 BED35_18070 BED35_18075 IPR001775 GspD/PilQ family BED35_18075 IPR004845 Type II secretion system GspD, conserved site BED35_18075 IPR004846 Type II/III secretion system BED35_18075 IPR005644 NolW-like BED35_18075 IPR013356 Type II secretion system GspD BED35_18075 IPR038591 BED35_18075 BED35_18080 IPR024961 BED35_18080 BED35_18085 IPR016032 Signal transduction response regulator, C-terminal effector BED35_18085 IPR036388 BED35_18085 BED35_18090 IPR001765 Carbonic anhydrase BED35_18090 IPR036874 BED35_18090 BED35_18095 IPR002577 Helix-turn-helix, HxlR type BED35_18095 IPR036388 BED35_18095 BED35_18095 IPR036390 BED35_18095 BED35_18100 IPR002347 Glucose/ribitol dehydrogenase BED35_18100 IPR020904 Short-chain dehydrogenase/reductase, conserved site BED35_18100 IPR036291 BED35_18100 BED35_18110 IPR001623 DnaJ domain BED35_18110 IPR002939 Chaperone DnaJ, C-terminal BED35_18110 IPR008971 HSP40/DnaJ peptide-binding BED35_18110 IPR018253 DnaJ domain, conserved site BED35_18110 IPR036869 BED35_18110 BED35_18115 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED35_18115 IPR003346 Transposase, IS116/IS110/IS902 BED35_18120 IPR000014 PAS domain BED35_18120 IPR000160 GGDEF domain BED35_18120 IPR013656 PAS fold-4 BED35_18120 IPR029787 Nucleotide cyclase BED35_18120 IPR035965 BED35_18120 BED35_18125 IPR011944 Steroid delta5-4-isomerase BED35_18125 IPR032710 BED35_18125 BED35_18125 IPR037401 BED35_18125 BED35_18130 IPR003812 Fido domain BED35_18130 IPR036388 BED35_18130 BED35_18130 IPR036597 BED35_18130 BED35_18135 IPR009061 DNA binding domain, putative BED35_18135 IPR010260 Bacteriophage P4, Orf88 BED35_18140 IPR001207 Transposase, mutator type BED35_18145 IPR001387 Cro/C1-type helix-turn-helix domain BED35_18145 IPR010982 Lambda repressor-like, DNA-binding domain BED35_18145 IPR022452 Zinc finger/helix-turn-helix protein, YgiT BED35_18145 IPR022453 Zinc finger, YgiT-type BED35_18145 IPR032758 BED35_18145 BED35_18150 IPR031451 BED35_18150 BED35_18150 IPR038493 BED35_18150 BED35_18155 IPR001387 Cro/C1-type helix-turn-helix domain BED35_18155 IPR010982 Lambda repressor-like, DNA-binding domain BED35_18160 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family BED35_18160 IPR035093 BED35_18160 BED35_18165 IPR009057 Homeodomain-like BED35_18165 IPR038717 BED35_18165 BED35_18170 IPR002104 Integrase, catalytic BED35_18170 IPR004107 Integrase, SAM-like, N-terminal BED35_18170 IPR010998 Integrase, Lambda-type, N-terminal BED35_18170 IPR011010 DNA breaking-rejoining enzyme, catalytic core BED35_18170 IPR013762 Integrase-like, catalytic core BED35_18200 IPR005564 Major head protein GpE BED35_18210 IPR009057 Homeodomain-like BED35_18210 IPR038717 BED35_18210 BED35_18230 IPR006935 Helicase/UvrB domain BED35_18230 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_18245 IPR002104 Integrase, catalytic BED35_18245 IPR011010 DNA breaking-rejoining enzyme, catalytic core BED35_18245 IPR013762 Integrase-like, catalytic core BED35_18255 IPR002313 Lysine-tRNA ligase, class II BED35_18255 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) BED35_18255 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type BED35_18255 IPR012340 Nucleic acid-binding, OB-fold BED35_18255 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal BED35_18255 IPR034762 BED35_18255 BED35_18260 IPR000352 Peptide chain release factor class I/class II BED35_18260 IPR004374 Peptide chain release factor 2 BED35_18260 IPR005139 Peptide chain release factor BED35_18265 IPR001667 DDH domain BED35_18265 IPR003156 DHHA1 domain BED35_18265 IPR004610 Bacterial RecJ exonuclease BED35_18265 IPR038763 BED35_18265 BED35_18270 IPR009094 Disulphide bond isomerase, DsbC, N-terminal BED35_18270 IPR012336 Thioredoxin-like fold BED35_18270 IPR017937 Thioredoxin, conserved site BED35_18270 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal BED35_18270 IPR036249 BED35_18270 BED35_18275 IPR002104 Integrase, catalytic BED35_18275 IPR004107 Integrase, SAM-like, N-terminal BED35_18275 IPR010998 Integrase, Lambda-type, N-terminal BED35_18275 IPR011010 DNA breaking-rejoining enzyme, catalytic core BED35_18275 IPR011932 Tyrosine recombinase XerD BED35_18275 IPR013762 Integrase-like, catalytic core BED35_18275 IPR023009 Tyrosine recombinase XerC/XerD BED35_18280 IPR001226 Flavodoxin, conserved site BED35_18280 IPR008254 Flavodoxin/nitric oxide synthase BED35_18280 IPR010086 Flavodoxin, long chain BED35_18280 IPR029039 Flavoprotein-like BED35_18285 IPR010364 Uncharacterised protein family, inner membrane CreD BED35_18290 IPR003594 Histidine kinase-like ATPase, C-terminal domain BED35_18290 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain BED35_18290 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BED35_18290 IPR029150 Sensory domain of two-component sensor kinase BED35_18290 IPR029151 Periplasmic sensor domain-like BED35_18290 IPR036097 BED35_18290 BED35_18290 IPR036890 BED35_18290 BED35_18295 IPR001789 Signal transduction response regulator, receiver domain BED35_18295 IPR001867 Signal transduction response regulator, C-terminal BED35_18295 IPR011006 CheY-like superfamily BED35_18295 IPR016032 Signal transduction response regulator, C-terminal effector BED35_18295 IPR036388 BED35_18295 BED35_18300 IPR009883 Protein of unknown function DUF1434 BED35_18305 IPR005631 Flavinator of succinate dehydrogenase BED35_18305 IPR036714 BED35_18305 BED35_18310 IPR006222 Glycine cleavage T-protein, N-terminal BED35_18310 IPR017703 YgfZ/GcvT conserved site BED35_18310 IPR023758 tRNA-modifying protein YgfZ BED35_18310 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA BED35_18310 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain BED35_18315 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED35_18315 IPR003346 Transposase, IS116/IS110/IS902 BED35_18320 IPR004254 Hly-III-related BED35_18320 IPR005744 HylII BED35_18325 IPR006674 HD domain BED35_18330 IPR002347 Glucose/ribitol dehydrogenase BED35_18330 IPR020904 Short-chain dehydrogenase/reductase, conserved site BED35_18330 IPR036291 BED35_18330 BED35_18335 IPR024311 Lipocalin-like domain BED35_18340 IPR003437 Glycine cleavage system P protein, homodimeric BED35_18340 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BED35_18340 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 BED35_18340 IPR015424 Pyridoxal phosphate-dependent transferase BED35_18340 IPR020581 Glycine cleavage system P protein BED35_18345 IPR002930 Glycine cleavage system H-protein BED35_18345 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site BED35_18345 IPR011053 Single hybrid motif BED35_18345 IPR017453 Glycine cleavage system H-protein, subgroup BED35_18345 IPR033753 BED35_18345 BED35_18350 IPR006222 Glycine cleavage T-protein, N-terminal BED35_18350 IPR006223 Glycine cleavage system T protein BED35_18350 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain BED35_18350 IPR022903 Glycine cleavage system T protein, bacteria BED35_18350 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 BED35_18350 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA BED35_18350 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain BED35_18355 IPR002938 Monooxygenase, FAD-binding BED35_18355 IPR010971 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6 BED35_18355 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site BED35_18355 IPR036188 BED35_18355 BED35_18360 IPR002938 Monooxygenase, FAD-binding BED35_18360 IPR010971 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6 BED35_18360 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase BED35_18360 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site BED35_18360 IPR036188 BED35_18360 BED35_18365 IPR000994 Peptidase M24, structural domain BED35_18365 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site BED35_18365 IPR001714 Peptidase M24, methionine aminopeptidase BED35_18365 IPR007865 Aminopeptidase P, N-terminal BED35_18365 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal BED35_18365 IPR036005 BED35_18365 BED35_18370 IPR011978 Uncharacterised protein family UPF0149 BED35_18370 IPR036255 BED35_18370 BED35_18375 IPR007838 Cell division protein ZapA-like BED35_18375 IPR023771 Cell division protein ZapA, eubacteria BED35_18375 IPR036192 BED35_18375 BED35_18385 IPR002698 5-formyltetrahydrofolate cyclo-ligase BED35_18385 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain BED35_18385 IPR037171 BED35_18385 BED35_18390 IPR000941 Enolase BED35_18390 IPR020809 Enolase, conserved site BED35_18390 IPR020810 Enolase, C-terminal BED35_18390 IPR020811 Enolase, N-terminal BED35_18390 IPR029017 Enolase N-terminal domain-like BED35_18390 IPR036849 BED35_18390 BED35_18395 IPR004468 CTP synthase BED35_18395 IPR017456 CTP synthase, N-terminal BED35_18395 IPR017926 Glutamine amidotransferase BED35_18395 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_18395 IPR029062 Class I glutamine amidotransferase-like BED35_18400 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core BED35_18400 IPR011551 NTP pyrophosphohydrolase MazG, bacterial BED35_18405 IPR002912 ACT domain BED35_18405 IPR003607 HD/PDEase domain BED35_18405 IPR004095 TGS BED35_18405 IPR004811 RelA/SpoT family BED35_18405 IPR007685 RelA/SpoT BED35_18405 IPR012675 Beta-grasp domain BED35_18405 IPR012676 TGS-like BED35_18410 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD BED35_18410 IPR002792 TRAM domain BED35_18410 IPR010280 (Uracil-5)-methyltransferase family BED35_18410 IPR012340 Nucleic acid-binding, OB-fold BED35_18410 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BED35_18410 IPR030390 BED35_18410 BED35_18410 IPR030391 BED35_18410 BED35_18415 IPR001789 Signal transduction response regulator, receiver domain BED35_18415 IPR003594 Histidine kinase-like ATPase, C-terminal domain BED35_18415 IPR003660 HAMP linker domain BED35_18415 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain BED35_18415 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BED35_18415 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain BED35_18415 IPR011006 CheY-like superfamily BED35_18415 IPR019247 Histidine kinase BarA, N-terminal BED35_18415 IPR036097 BED35_18415 BED35_18415 IPR036641 BED35_18415 BED35_18415 IPR036890 BED35_18415 BED35_18420 IPR001478 PDZ domain BED35_18420 IPR001940 Peptidase S1C BED35_18420 IPR009003 Trypsin-like cysteine/serine peptidase domain BED35_18420 IPR011782 Peptidase S1C, Do BED35_18420 IPR036034 BED35_18420 BED35_18425 IPR003607 HD/PDEase domain BED35_18425 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase BED35_18425 IPR006674 HD domain BED35_18425 IPR020779 Deoxyguanosinetriphosphate triphosphohydrolase, proteobacteria BED35_18425 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain BED35_18425 IPR026875 Phosphohydrolase-associated domain BED35_18430 IPR000845 Nucleoside phosphorylase domain BED35_18430 IPR010049 MTA/SAH nucleosidase BED35_18430 IPR035994 BED35_18430 BED35_18435 IPR002491 ABC transporter periplasmic binding domain BED35_18435 IPR023544 ABC transporter, vitamin B12-binding protein BED35_18440 IPR005115 Uncharacterised domain UPF0126 BED35_18445 IPR000361 FeS cluster biogenesis BED35_18445 IPR016092 FeS cluster insertion protein BED35_18445 IPR017870 FeS cluster insertion, C-terminal, conserved site BED35_18445 IPR023063 Iron-sulfur cluster insertion protein ErpA BED35_18445 IPR035903 BED35_18445 BED35_18450 IPR001807 Chloride channel, voltage gated BED35_18450 IPR014743 Chloride channel, core BED35_18455 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase BED35_18455 IPR005814 Aminotransferase class-III BED35_18455 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BED35_18455 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 BED35_18455 IPR015424 Pyridoxal phosphate-dependent transferase BED35_18460 IPR004737 Nitrate transporter BED35_18460 IPR011701 Major facilitator superfamily BED35_18460 IPR036259 BED35_18460 BED35_18465 IPR000522 ABC transporter, permease protein BED35_18465 IPR037294 BED35_18465 BED35_18470 IPR002491 ABC transporter periplasmic binding domain BED35_18475 IPR003439 ABC transporter-like BED35_18475 IPR003593 AAA+ ATPase domain BED35_18475 IPR017871 ABC transporter, conserved site BED35_18475 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_18480 IPR001264 Glycosyl transferase, family 51 BED35_18480 IPR001460 Penicillin-binding protein, transpeptidase BED35_18480 IPR011813 Penicillin-binding protein 1B BED35_18480 IPR012338 Beta-lactamase/transpeptidase-like BED35_18480 IPR023346 Lysozyme-like domain BED35_18480 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_18480 IPR028166 Bifunctional transglycosylase second domain BED35_18480 IPR032730 BED35_18480 BED35_18480 IPR036950 BED35_18480 BED35_18485 IPR001650 Helicase, C-terminal BED35_18485 IPR007502 Helicase-associated domain BED35_18485 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type BED35_18485 IPR011545 DEAD/DEAH box helicase domain BED35_18485 IPR013689 RNA helicase, ATP-dependent, HrpB type, C-terminal BED35_18485 IPR014001 Helicase, superfamily 1/2, ATP-binding domain BED35_18485 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_18490 IPR004175 2',5' RNA ligase BED35_18490 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase BED35_18495 IPR005224 Sugar fermentation stimulation protein BED35_18500 IPR000962 Zinc finger, DksA/TraR C4-type BED35_18500 IPR012784 RNA polymerase-binding transcription factor DksA BED35_18500 IPR020458 Zinc finger, DksA/TraR C4-type conserved site BED35_18500 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria BED35_18500 IPR037187 BED35_18500 BED35_18505 IPR000924 Glutamyl/glutaminyl-tRNA synthetase BED35_18505 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED35_18505 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain BED35_18505 IPR022380 Glutamyl-Q tRNA(Asp) synthetase BED35_18510 IPR002646 Poly A polymerase, head domain BED35_18510 IPR010206 Poly(A) polymerase I BED35_18510 IPR025866 Polymerase A arginine-rich C-terminal domain BED35_18510 IPR032828 BED35_18510 BED35_18515 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK BED35_18515 IPR035907 BED35_18515 BED35_18520 IPR003700 Ketopantoate hydroxymethyltransferase BED35_18520 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain BED35_18525 IPR003721 Pantoate-beta-alanine ligase BED35_18525 IPR004821 Cytidyltransferase-like domain BED35_18525 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED35_18530 IPR003190 Aspartate decarboxylase BED35_18530 IPR009010 Aspartate decarboxylase-like domain BED35_18535 IPR002509 Polysaccharide deacetylase BED35_18535 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel BED35_18540 IPR000412 ABC-2 transporter BED35_18540 IPR013525 ABC-2 type transporter BED35_18545 IPR003439 ABC transporter-like BED35_18545 IPR003593 AAA+ ATPase domain BED35_18545 IPR017871 ABC transporter, conserved site BED35_18545 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_18550 IPR001765 Carbonic anhydrase BED35_18550 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site BED35_18550 IPR036874 BED35_18550 BED35_18555 IPR000836 Phosphoribosyltransferase domain BED35_18555 IPR005904 Hypoxanthine phosphoribosyl transferase BED35_18555 IPR029057 Phosphoribosyltransferase-like BED35_18560 IPR001117 Multicopper oxidase, type 1 BED35_18560 IPR002355 Multicopper oxidase, copper-binding site BED35_18560 IPR008972 Cupredoxin BED35_18560 IPR011706 Multicopper oxidase, type 2 BED35_18560 IPR011707 Multicopper oxidase, type 3 BED35_18560 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal BED35_18565 IPR019114 Chaperone lipoprotein, PulS/OutS-like BED35_18565 IPR038432 BED35_18565 BED35_18570 IPR001045 Spermidine/spermine synthases family BED35_18570 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BED35_18570 IPR030373 BED35_18570 BED35_18570 IPR035246 BED35_18570 BED35_18570 IPR037163 BED35_18570 BED35_18575 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic BED35_18575 IPR009165 S-adenosylmethionine decarboxylase, bacterial BED35_18575 IPR016067 S-adenosylmethionine decarboxylase, core BED35_18585 IPR000620 Drug/metabolite transporter BED35_18590 IPR008249 Uncharacterised protein family UPF0231 BED35_18600 IPR000531 TonB-dependent receptor, beta-barrel BED35_18600 IPR010105 TonB-dependent siderophore receptor BED35_18600 IPR010916 TonB box, conserved site BED35_18600 IPR010917 TonB-dependent receptor, conserved site BED35_18600 IPR012910 TonB-dependent receptor, plug BED35_18600 IPR036942 BED35_18600 BED35_18600 IPR037066 BED35_18600 BED35_18615 IPR001100 BED35_18615 BED35_18615 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BED35_18615 IPR006258 Dihydrolipoamide dehydrogenase BED35_18615 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site BED35_18615 IPR016156 FAD/NAD-linked reductase, dimerisation domain BED35_18615 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain BED35_18615 IPR036188 BED35_18615 BED35_18620 IPR000089 Biotin/lipoyl attachment BED35_18620 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain BED35_18620 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site BED35_18620 IPR004167 E3 binding BED35_18620 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex BED35_18620 IPR011053 Single hybrid motif BED35_18620 IPR023213 Chloramphenicol acetyltransferase-like domain BED35_18620 IPR036625 BED35_18620 BED35_18625 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type BED35_18625 IPR005474 Transketolase, N-terminal BED35_18625 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II BED35_18625 IPR029061 Thiamin diphosphate-binding fold BED35_18630 IPR000524 Transcription regulator HTH, GntR BED35_18630 IPR008920 Transcription regulator FadR/GntR, C-terminal BED35_18630 IPR011711 GntR, C-terminal BED35_18630 IPR036388 BED35_18630 BED35_18630 IPR036390 BED35_18630 BED35_18635 IPR002293 Amino acid/polyamine transporter I BED35_18635 IPR004840 Amino acid permease, conserved site BED35_18635 IPR004841 Amino acid permease/ SLC12A domain BED35_18640 IPR031347 BED35_18640 BED35_18640 IPR036640 BED35_18640 BED35_18645 IPR002502 N-acetylmuramoyl-L-alanine amidase domain BED35_18645 IPR036505 BED35_18645 BED35_18650 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal BED35_18650 IPR004393 Nicotinate-nucleotide pyrophosphorylase BED35_18650 IPR013785 Aldolase-type TIM barrel BED35_18650 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal BED35_18650 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD BED35_18650 IPR036068 BED35_18650 BED35_18650 IPR037128 BED35_18650 BED35_18655 IPR001082 Fimbrial protein pilin BED35_18655 IPR012902 Prokaryotic N-terminal methylation site BED35_18660 IPR001482 Type II secretion system protein E BED35_18660 IPR007831 General secretory system II, protein E, N-terminal BED35_18660 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_18660 IPR037257 BED35_18660 BED35_18665 IPR001992 Type II secretion system conserved site BED35_18665 IPR003004 GspF/PilC family BED35_18665 IPR018076 Type II secretion system F domain BED35_18670 IPR001093 IMP dehydrogenase/GMP reductase BED35_18670 IPR005993 Guanosine monophosphate reductase 1 BED35_18670 IPR013785 Aldolase-type TIM barrel BED35_18670 IPR015875 IMP dehydrogenase / GMP reductase, conserved site BED35_18675 IPR001977 Dephospho-CoA kinase BED35_18675 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_18680 IPR009777 Cell division protein ZapD BED35_18680 IPR027462 Z ring-associated protein D, C-terminal domain BED35_18680 IPR036268 BED35_18680 BED35_18685 IPR005584 DNA gyrase inhibitor YacG BED35_18685 IPR013088 Zinc finger, NHR/GATA-type BED35_18690 IPR000086 NUDIX hydrolase domain BED35_18690 IPR003561 Mutator MutT BED35_18690 IPR015797 NUDIX hydrolase domain-like BED35_18690 IPR020084 NUDIX hydrolase, conserved site BED35_18690 IPR020476 NUDIX hydrolase BED35_18695 IPR000185 Protein translocase subunit SecA BED35_18695 IPR004027 SEC-C motif BED35_18695 IPR011115 SecA DEAD-like, N-terminal BED35_18695 IPR011116 SecA Wing/Scaffold BED35_18695 IPR011130 SecA preprotein, cross-linking domain BED35_18695 IPR020937 SecA conserved site BED35_18695 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_18695 IPR036266 BED35_18695 BED35_18695 IPR036670 BED35_18695 BED35_18700 IPR009502 Secretion monitor BED35_18705 IPR007922 Protein of unknown function DUF721/UPF0232 BED35_18710 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase BED35_18710 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal BED35_18710 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal BED35_18710 IPR020568 Ribosomal protein S5 domain 2-type fold BED35_18715 IPR000158 Cell division protein FtsZ BED35_18715 IPR003008 Tubulin/FtsZ, GTPase domain BED35_18715 IPR008280 Tubulin/FtsZ, C-terminal BED35_18715 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain BED35_18715 IPR020805 Cell division protein FtsZ, conserved site BED35_18715 IPR024757 Cell division protein FtsZ, C-terminal BED35_18715 IPR036525 BED35_18715 BED35_18720 IPR003494 SHS2 domain inserted in FtsA BED35_18720 IPR020823 Cell division protein FtsA BED35_18725 IPR005548 Cell division protein FtsQ/DivIB BED35_18725 IPR013685 Polypeptide-transport-associated, FtsQ-type BED35_18725 IPR026579 Cell division protein FtsQ BED35_18730 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site BED35_18730 IPR005905 D-alanine--D-alanine ligase BED35_18730 IPR011095 D-alanine--D-alanine ligase, C-terminal BED35_18730 IPR011127 D-alanine--D-alanine ligase, N-terminal domain BED35_18730 IPR013815 ATP-grasp fold, subdomain 1 BED35_18730 IPR016185 Pre-ATP-grasp domain BED35_18735 IPR000713 Mur ligase, N-terminal BED35_18735 IPR004101 Mur ligase, C-terminal BED35_18735 IPR005758 UDP-N-acetylmuramate-alanine ligase BED35_18735 IPR013221 Mur ligase, central BED35_18735 IPR036565 BED35_18735 BED35_18735 IPR036615 BED35_18735 BED35_18740 IPR004276 Glycosyl transferase, family 28 BED35_18740 IPR006009 N-acetylglucosaminyltransferase, MurG BED35_18740 IPR007235 Glycosyl transferase, family 28, C-terminal BED35_18745 IPR001182 Cell cycle protein FtsW/RodA BED35_18745 IPR013437 Cell division protein FtsW BED35_18745 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site BED35_18750 IPR004101 Mur ligase, C-terminal BED35_18750 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase BED35_18750 IPR013221 Mur ligase, central BED35_18750 IPR036565 BED35_18750 BED35_18750 IPR036615 BED35_18750 BED35_18755 IPR000715 Glycosyl transferase, family 4 BED35_18755 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase BED35_18755 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site BED35_18760 IPR000713 Mur ligase, N-terminal BED35_18760 IPR004101 Mur ligase, C-terminal BED35_18760 IPR005863 UDP-MurNAc-pentapeptide synthetase BED35_18760 IPR013221 Mur ligase, central BED35_18760 IPR035911 BED35_18760 BED35_18760 IPR036565 BED35_18760 BED35_18760 IPR036615 BED35_18760 BED35_18765 IPR000713 Mur ligase, N-terminal BED35_18765 IPR004101 Mur ligase, C-terminal BED35_18765 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase BED35_18765 IPR013221 Mur ligase, central BED35_18765 IPR035911 BED35_18765 BED35_18765 IPR036565 BED35_18765 BED35_18765 IPR036615 BED35_18765 BED35_18770 IPR001460 Penicillin-binding protein, transpeptidase BED35_18770 IPR005311 Penicillin-binding protein, dimerisation domain BED35_18770 IPR012338 Beta-lactamase/transpeptidase-like BED35_18770 IPR036138 BED35_18770 BED35_18770 IPR037532 BED35_18770 BED35_18780 IPR002903 Ribosomal RNA small subunit methyltransferase H BED35_18780 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain BED35_18780 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BED35_18785 IPR003444 MraZ BED35_18785 IPR020603 MraZ domain BED35_18785 IPR037914 BED35_18785 BED35_18785 IPR038619 BED35_18785 BED35_18790 IPR010574 L-alanine exporter AlaE BED35_18795 IPR000843 Transcription regulator HTH, LacI BED35_18795 IPR001761 Periplasmic binding protein/LacI sugar binding domain BED35_18795 IPR010982 Lambda repressor-like, DNA-binding domain BED35_18795 IPR012781 D-fructose-responsive transcription factor BED35_18795 IPR028082 Periplasmic binding protein-like I BED35_18800 IPR002912 ACT domain BED35_18800 IPR004789 Acetolactate synthase, small subunit BED35_18800 IPR019455 Acetolactate synthase, small subunit, C-terminal BED35_18800 IPR027271 BED35_18800 BED35_18805 IPR000399 TPP-binding enzyme, conserved site BED35_18805 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding BED35_18805 IPR012000 Thiamine pyrophosphate enzyme, central domain BED35_18805 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain BED35_18805 IPR012846 Acetolactate synthase, large subunit, biosynthetic BED35_18805 IPR029035 DHS-like NAD/FAD-binding domain BED35_18805 IPR029061 Thiamin diphosphate-binding fold BED35_18810 IPR000873 AMP-dependent synthetase/ligase BED35_18810 IPR020845 AMP-binding, conserved site BED35_18815 IPR000847 Transcription regulator HTH, LysR BED35_18815 IPR005119 LysR, substrate-binding BED35_18815 IPR036388 BED35_18815 BED35_18815 IPR036390 BED35_18815 BED35_18820 IPR000891 Pyruvate carboxyltransferase BED35_18820 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site BED35_18820 IPR005671 2-isopropylmalate synthase, bacterial-type BED35_18820 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain BED35_18820 IPR013785 Aldolase-type TIM barrel BED35_18820 IPR036230 BED35_18820 BED35_18825 IPR004429 Isopropylmalate dehydrogenase BED35_18825 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site BED35_18825 IPR024084 Isopropylmalate dehydrogenase-like domain BED35_18830 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha BED35_18830 IPR004430 3-isopropylmalate dehydratase, large subunit BED35_18830 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 BED35_18830 IPR018136 Aconitase family, 4Fe-4S cluster binding site BED35_18830 IPR036008 BED35_18830 BED35_18835 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel BED35_18835 IPR004431 3-isopropylmalate dehydratase, small subunit BED35_18835 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel BED35_18850 IPR004750 Sugar efflux BED35_18850 IPR011701 Major facilitator superfamily BED35_18850 IPR036259 BED35_18850 BED35_18855 IPR001150 Glycine radical domain BED35_18855 IPR004184 Pyruvate formate lyase domain BED35_18855 IPR010098 Glycyl radical enzyme, PFL2/glycerol dehydratase family BED35_18855 IPR019777 Formate C-acetyltransferase glycine radical, conserved site BED35_18865 IPR000914 Bacterial extracellular solute-binding protein, family 5 BED35_18865 IPR023767 Transcriptional regulator SgrR BED35_18865 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain BED35_18865 IPR036390 BED35_18865 BED35_18875 IPR025320 Protein of unknown function DUF4225 BED35_18880 IPR005948 Thiamine ABC transporter periplasmic binding protein BED35_18880 IPR005967 Proteobacterial thiamine ABC transporter, periplasmic binding protein BED35_18880 IPR006059 Bacterial extracellular solute-binding, family 1 BED35_18885 IPR000515 MetI-like domain BED35_18885 IPR005947 Thiamine ABC transporter, permease protein BED35_18885 IPR035906 BED35_18885 BED35_18890 IPR003439 ABC transporter-like BED35_18890 IPR003593 AAA+ ATPase domain BED35_18890 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ BED35_18890 IPR017871 ABC transporter, conserved site BED35_18890 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_18895 IPR032816 BED35_18895 BED35_18900 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain BED35_18900 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain BED35_18900 IPR006172 DNA-directed DNA polymerase, family B BED35_18900 IPR012337 Ribonuclease H-like domain BED35_18900 IPR017964 DNA-directed DNA polymerase, family B, conserved site BED35_18900 IPR023211 DNA polymerase, palm domain BED35_18900 IPR036397 BED35_18900 BED35_18905 IPR000330 SNF2-related BED35_18905 IPR001650 Helicase, C-terminal BED35_18905 IPR014001 Helicase, superfamily 1/2, ATP-binding domain BED35_18905 IPR022737 RNA polymerase recycling, bacterial, C-terminal BED35_18905 IPR023949 RNA polymerase-associated protein RapA BED35_18905 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_18905 IPR038718 BED35_18905 BED35_18910 IPR003344 Bacterial Ig-like, group 1 BED35_18910 IPR003535 Intimin/invasin bacterial adhesion mediator protein BED35_18910 IPR008964 Invasin/intimin cell-adhesion BED35_18910 IPR013783 Immunoglobulin-like fold BED35_18910 IPR015217 Invasin, domain 3 BED35_18910 IPR024519 Domain of unknown function DUF3442, intimin/invasin BED35_18910 IPR038177 BED35_18910 BED35_18915 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F BED35_18915 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site BED35_18915 IPR020103 Pseudouridine synthase, catalytic domain BED35_18920 IPR001623 DnaJ domain BED35_18920 IPR007791 Heat shock protein DnaJ-like protein DjlA BED35_18920 IPR023749 DnaJ-like protein DjlA BED35_18920 IPR029024 TerB-like BED35_18920 IPR036869 BED35_18920 BED35_18925 IPR005653 Organic solvent tolerance-like, N-terminal BED35_18925 IPR007543 Organic solvent tolerance protein, C-terminal BED35_18925 IPR020889 Lipopolysaccharide assembly, LptD BED35_18930 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type BED35_18930 IPR015391 SurA N-terminal BED35_18930 IPR023034 Peptidyl-prolyl isomerase SurA BED35_18930 IPR027304 Trigger factor/SurA domain BED35_18935 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA BED35_18935 IPR037510 BED35_18935 BED35_18940 IPR001737 Ribosomal RNA adenine methylase transferase BED35_18940 IPR011530 Ribosomal RNA adenine dimethylase BED35_18940 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site BED35_18940 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal BED35_18940 IPR023165 rRNA adenine dimethylase-like BED35_18940 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BED35_18945 IPR007474 ApaG domain BED35_18945 IPR023065 Uncharacterised protein family ApaG BED35_18945 IPR036767 BED35_18945 BED35_18950 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) BED35_18950 IPR004843 Calcineurin-like phosphoesterase domain, apaH type BED35_18950 IPR029052 Metallo-dependent phosphatase-like BED35_18955 IPR001796 Dihydrofolate reductase domain BED35_18955 IPR012259 Dihydrofolate reductase BED35_18955 IPR017925 Dihydrofolate reductase conserved site BED35_18955 IPR024072 Dihydrofolate reductase-like domain BED35_18960 IPR020914 Uncharacterised protein family UPF0442 BED35_18960 IPR024528 Domain of unknown function DUF3815 BED35_18965 IPR010619 Domain of unknown function DUF1212 BED35_18970 IPR001123 Lysine-type exporter protein (LYSE/YGGA) BED35_18975 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain BED35_18975 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain BED35_18975 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain BED35_18975 IPR006275 Carbamoyl-phosphate synthase, large subunit BED35_18975 IPR011607 Methylglyoxal synthase-like domain BED35_18975 IPR016185 Pre-ATP-grasp domain BED35_18975 IPR036897 BED35_18975 BED35_18975 IPR036914 BED35_18975 BED35_18980 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain BED35_18980 IPR006274 Carbamoyl-phosphate synthase, small subunit BED35_18980 IPR017926 Glutamine amidotransferase BED35_18980 IPR029062 Class I glutamine amidotransferase-like BED35_18980 IPR036480 BED35_18980 BED35_18985 IPR000846 Dihydrodipicolinate reductase, N-terminal BED35_18985 IPR022663 Dihydrodipicolinate reductase, C-terminal BED35_18985 IPR022664 Dihydrodipicolinate reductase, conserved site BED35_18985 IPR023940 Dihydrodipicolinate reductase, bacterial BED35_18985 IPR036291 BED35_18985 BED35_18990 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase BED35_18995 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain BED35_19000 IPR001872 Peptidase A8, signal peptidase II BED35_19005 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site BED35_19005 IPR002300 Aminoacyl-tRNA synthetase, class Ia BED35_19005 IPR002301 Isoleucine-tRNA ligase BED35_19005 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain BED35_19005 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding BED35_19005 IPR010663 Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase BED35_19005 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding BED35_19005 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED35_19005 IPR023585 Isoleucine-tRNA ligase, type 1 BED35_19010 IPR002606 Riboflavin kinase, bacterial BED35_19010 IPR004821 Cytidyltransferase-like domain BED35_19010 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED35_19010 IPR015864 FAD synthetase BED35_19010 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic BED35_19010 IPR023465 Riboflavin kinase domain BED35_19020 IPR002583 Ribosomal protein S20 BED35_19020 IPR036510 BED35_19020 BED35_19025 IPR000847 Transcription regulator HTH, LysR BED35_19025 IPR005119 LysR, substrate-binding BED35_19025 IPR036388 BED35_19025 BED35_19025 IPR036390 BED35_19025 BED35_19030 IPR004670 Na+/H+ antiporter NhaA BED35_19030 IPR023171 Na/H antiporter domain BED35_19035 IPR001305 Heat shock protein DnaJ, cysteine-rich domain BED35_19035 IPR001623 DnaJ domain BED35_19035 IPR002939 Chaperone DnaJ, C-terminal BED35_19035 IPR008971 HSP40/DnaJ peptide-binding BED35_19035 IPR012724 Chaperone DnaJ BED35_19035 IPR018253 DnaJ domain, conserved site BED35_19035 IPR036410 BED35_19035 BED35_19035 IPR036869 BED35_19035 BED35_19040 IPR012725 Chaperone DnaK BED35_19040 IPR013126 Heat shock protein 70 family BED35_19040 IPR018181 Heat shock protein 70, conserved site BED35_19040 IPR029047 Heat shock protein 70kD, peptide-binding domain BED35_19040 IPR029048 Heat shock protein 70kD, C-terminal domain BED35_19045 IPR000791 GPR1/FUN34/yaaH BED35_19050 IPR001064 Beta/gamma crystallin BED35_19050 IPR011024 Gamma-crystallin-related BED35_19050 IPR016181 Acyl-CoA N-acyltransferase BED35_19055 IPR011701 Major facilitator superfamily BED35_19055 IPR036259 BED35_19055 BED35_19060 IPR001453 Molybdopterin binding domain BED35_19060 IPR008284 Molybdenum cofactor biosynthesis, conserved site BED35_19060 IPR036425 BED35_19060 BED35_19065 IPR001585 Transaldolase BED35_19065 IPR004730 Transaldolase type 1 BED35_19065 IPR013785 Aldolase-type TIM barrel BED35_19065 IPR018225 Transaldolase, active site BED35_19070 IPR005583 Uncharacterised protein family UPF0246 BED35_19075 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED35_19075 IPR003346 Transposase, IS116/IS110/IS902 BED35_19080 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site BED35_19080 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme BED35_19080 IPR004450 Threonine synthase-like BED35_19080 IPR029144 Threonine synthase, N-terminal BED35_19080 IPR036052 BED35_19080 BED35_19080 IPR037158 BED35_19080 BED35_19085 IPR000870 Homoserine kinase BED35_19085 IPR006203 GHMP kinase, ATP-binding, conserved site BED35_19085 IPR006204 GHMP kinase N-terminal domain BED35_19085 IPR013750 GHMP kinase, C-terminal domain BED35_19085 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BED35_19085 IPR020568 Ribosomal protein S5 domain 2-type fold BED35_19085 IPR036554 BED35_19085 BED35_19090 IPR001048 Aspartate/glutamate/uridylate kinase BED35_19090 IPR001341 Aspartate kinase domain BED35_19090 IPR001342 Homoserine dehydrogenase, catalytic BED35_19090 IPR002912 ACT domain BED35_19090 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding BED35_19090 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I BED35_19090 IPR018042 Aspartate kinase, conserved site BED35_19090 IPR019811 Homoserine dehydrogenase, conserved site BED35_19090 IPR027795 GATS-like ACT domain BED35_19090 IPR036291 BED35_19090 BED35_19090 IPR036393 BED35_19090 BED35_19100 IPR001789 Signal transduction response regulator, receiver domain BED35_19100 IPR001867 Signal transduction response regulator, C-terminal BED35_19100 IPR011006 CheY-like superfamily BED35_19100 IPR016032 Signal transduction response regulator, C-terminal effector BED35_19100 IPR036388 BED35_19100 BED35_19105 IPR010292 Uncharacterised protein family CreA BED35_19110 IPR009057 Homeodomain-like BED35_19110 IPR010499 Bacterial transcription activator, effector binding BED35_19110 IPR011256 Regulatory factor, effector binding domain BED35_19110 IPR018060 DNA binding HTH domain, AraC-type BED35_19110 IPR018062 HTH domain AraC-type, conserved site BED35_19110 IPR020449 Transcription regulator HTH, AraC- type BED35_19110 IPR029442 GyrI-like small molecule binding domain BED35_19115 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site BED35_19115 IPR013078 Histidine phosphatase superfamily, clade-1 BED35_19115 IPR023086 Phosphoglycerate mutase, GpmB, probable BED35_19115 IPR029033 Histidine phosphatase superfamily BED35_19125 IPR000831 Trp repressor BED35_19125 IPR010921 Trp repressor/replication initiator BED35_19125 IPR013335 Trp repressor, bacterial BED35_19125 IPR038116 BED35_19125 BED35_19130 IPR000189 Prokaryotic transglycosylase, active site BED35_19130 IPR008258 Lytic transglycosylase-like SLT domain BED35_19130 IPR008939 Lytic transglycosylase, superhelical U-shaped BED35_19130 IPR012289 Lytic transglycosylase, superhelical linker BED35_19130 IPR023346 Lysozyme-like domain BED35_19130 IPR037061 BED35_19130 BED35_19135 IPR001757 Cation-transporting P-type ATPase BED35_19135 IPR004014 Cation-transporting P-type ATPase, N-terminal BED35_19135 IPR006068 Cation-transporting P-type ATPase, C-terminal BED35_19135 IPR008250 P-type ATPase, A domain BED35_19135 IPR018303 P-type ATPase, phosphorylation site BED35_19135 IPR023214 HAD-like domain BED35_19135 IPR023298 P-type ATPase, transmembrane domain BED35_19135 IPR023299 P-type ATPase, cytoplasmic domain N BED35_19135 IPR036412 BED35_19135 BED35_19140 IPR025293 Protein of unknown function DUF4154 BED35_19145 IPR000160 GGDEF domain BED35_19145 IPR029787 Nucleotide cyclase BED35_19145 IPR033417 BED35_19145 BED35_19150 IPR006664 Outer membrane protein, bacterial BED35_19150 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal BED35_19150 IPR036737 BED35_19150 BED35_19155 IPR003439 ABC transporter-like BED35_19155 IPR003593 AAA+ ATPase domain BED35_19155 IPR017871 ABC transporter, conserved site BED35_19155 IPR022374 ABC transporter, ATP-binding protein, ChvD BED35_19155 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_19155 IPR032781 BED35_19155 BED35_19160 IPR003812 Fido domain BED35_19160 IPR025230 Domain of unknown function DUF4172 BED35_19160 IPR036388 BED35_19160 BED35_19160 IPR036597 BED35_19160 BED35_19165 IPR000847 Transcription regulator HTH, LysR BED35_19165 IPR005119 LysR, substrate-binding BED35_19165 IPR036388 BED35_19165 BED35_19165 IPR036390 BED35_19165 BED35_19170 IPR011032 GroES (chaperonin 10)-like BED35_19170 IPR013154 Alcohol dehydrogenase GroES-like BED35_19170 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 BED35_19170 IPR020843 Polyketide synthase, enoylreductase BED35_19170 IPR036291 BED35_19170 BED35_19185 IPR023190 Phosphoserine phosphatase, domain 2 BED35_19185 IPR023214 HAD-like domain BED35_19185 IPR036412 BED35_19185 BED35_19190 IPR019305 Uncharacterised protein family Smp BED35_19195 IPR000845 Nucleoside phosphorylase domain BED35_19195 IPR004402 Purine nucleoside phosphorylase DeoD-type BED35_19195 IPR018016 Nucleoside phosphorylase, conserved site BED35_19195 IPR035994 BED35_19195 BED35_19200 IPR006124 Metalloenzyme BED35_19200 IPR010045 Phosphopentomutase BED35_19200 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha BED35_19200 IPR017850 Alkaline-phosphatase-like, core domain BED35_19200 IPR024052 Phosphopentomutase DeoB cap domain BED35_19205 IPR000053 Pyrimidine-nucleoside phosphorylase BED35_19205 IPR000312 Glycosyl transferase, family 3 BED35_19205 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal BED35_19205 IPR013465 Thymidine phosphorylase BED35_19205 IPR017459 Glycosyl transferase family 3, N-terminal domain BED35_19205 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site BED35_19205 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic BED35_19205 IPR035902 BED35_19205 BED35_19205 IPR036320 BED35_19205 BED35_19205 IPR036566 BED35_19205 BED35_19210 IPR002915 DeoC/FbaB/ lacD aldolase BED35_19210 IPR011343 Deoxyribose-phosphate aldolase BED35_19210 IPR013785 Aldolase-type TIM barrel BED35_19210 IPR023649 Deoxyribose-phosphate aldolase type II BED35_19215 IPR002668 Concentrative nucleoside transporter N-terminal domain BED35_19215 IPR011642 Nucleoside recognition Gate BED35_19215 IPR011657 Concentrative nucleoside transporter C-terminal domain BED35_19215 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial BED35_19220 IPR001130 TatD family BED35_19220 IPR018228 Deoxyribonuclease, TatD-related, conserved site BED35_19220 IPR032466 BED35_19220 BED35_19225 IPR002641 Patatin/Phospholipase A2-related BED35_19225 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase BED35_19230 IPR009760 Protein of unknown function DUF1328 BED35_19235 IPR007055 BON domain BED35_19235 IPR014004 Transport-associated and nodulation domain, bacteria BED35_19240 IPR000795 Elongation factor, GTP-binding domain BED35_19240 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 BED35_19240 IPR004548 Peptide chain release factor 3 BED35_19240 IPR005225 Small GTP-binding protein domain BED35_19240 IPR009000 Translation protein, beta-barrel domain BED35_19240 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_19240 IPR031157 BED35_19240 BED35_19240 IPR032090 BED35_19240 BED35_19240 IPR035647 BED35_19240 BED35_19240 IPR038467 BED35_19240 BED35_19245 IPR000182 GNAT domain BED35_19245 IPR006464 Ribosomal-protein-alanine acetyltransferase BED35_19245 IPR016181 Acyl-CoA N-acyltransferase BED35_19250 IPR004615 DNA polymerase III, psi subunit BED35_19250 IPR036654 BED35_19250 BED35_19255 IPR002052 DNA methylase, N-6 adenine-specific, conserved site BED35_19255 IPR007848 Methyltransferase small domain BED35_19255 IPR013675 Methyltransferase small, N-terminal BED35_19255 IPR023543 rRNA small subunit methyltransferase C BED35_19255 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BED35_19260 IPR023210 NADP-dependent oxidoreductase domain BED35_19260 IPR036812 BED35_19260 BED35_19275 IPR009885 Protein of unknown function DUF1435 BED35_19280 IPR000160 GGDEF domain BED35_19280 IPR029787 Nucleotide cyclase BED35_19285 IPR000531 TonB-dependent receptor, beta-barrel BED35_19285 IPR010105 TonB-dependent siderophore receptor BED35_19285 IPR010916 TonB box, conserved site BED35_19285 IPR010917 TonB-dependent receptor, conserved site BED35_19285 IPR012910 TonB-dependent receptor, plug BED35_19285 IPR036942 BED35_19285 BED35_19285 IPR037066 BED35_19285 BED35_19290 IPR002491 ABC transporter periplasmic binding domain BED35_19295 IPR002139 Ribokinase BED35_19295 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site BED35_19295 IPR011611 Carbohydrate kinase PfkB BED35_19295 IPR029056 Ribokinase-like BED35_19300 IPR003192 Porin, LamB type BED35_19300 IPR021570 LamB-type porin N-terminal domain BED35_19300 IPR036998 BED35_19300 BED35_19305 IPR001996 Phosphotransferase system, IIB component, type 1 BED35_19305 IPR003352 Phosphotransferase system, EIIC BED35_19305 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component BED35_19305 IPR010973 Phosphotransferase system, sucrose-specific IIBC component BED35_19305 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site BED35_19305 IPR036878 BED35_19305 BED35_19310 IPR001362 Glycoside hydrolase, family 32 BED35_19310 IPR006232 Sucrose-6-phosphate hydrolase BED35_19310 IPR013148 Glycosyl hydrolase family 32, N-terminal BED35_19310 IPR013189 Glycosyl hydrolase family 32, C-terminal BED35_19310 IPR013320 Concanavalin A-like lectin/glucanase, subgroup BED35_19310 IPR018053 Glycoside hydrolase, family 32, active site BED35_19310 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain BED35_19315 IPR000843 Transcription regulator HTH, LacI BED35_19315 IPR010982 Lambda repressor-like, DNA-binding domain BED35_19315 IPR012781 D-fructose-responsive transcription factor BED35_19315 IPR028082 Periplasmic binding protein-like I BED35_19320 IPR000014 PAS domain BED35_19320 IPR002078 RNA polymerase sigma factor 54 interaction domain BED35_19320 IPR002197 DNA binding HTH domain, Fis-type BED35_19320 IPR009057 Homeodomain-like BED35_19320 IPR013767 PAS fold BED35_19320 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BED35_19320 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_19320 IPR029016 GAF domain-like BED35_19320 IPR035965 BED35_19320 BED35_19325 IPR000070 Pectinesterase, catalytic BED35_19325 IPR011050 Pectin lyase fold/virulence factor BED35_19325 IPR012334 Pectin lyase fold BED35_19330 IPR018724 2OG-Fe dioxygenase BED35_19335 IPR011701 Major facilitator superfamily BED35_19335 IPR036259 BED35_19335 BED35_19350 IPR009057 Homeodomain-like BED35_19350 IPR038717 BED35_19350 BED35_19355 IPR003696 Carbamoyltransferase BED35_19355 IPR031730 BED35_19355 BED35_19355 IPR038152 BED35_19355 BED35_19360 IPR001296 Glycosyl transferase, family 1 BED35_19370 IPR004007 DhaL domain BED35_19370 IPR012737 Dihydroxyacetone kinase, subunit L BED35_19370 IPR036117 BED35_19370 BED35_19375 IPR004006 Dak kinase BED35_19375 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 BED35_19380 IPR001670 Alcohol dehydrogenase, iron-type BED35_19380 IPR016205 Glycerol dehydrogenase BED35_19380 IPR018211 Alcohol dehydrogenase, iron-type, conserved site BED35_19385 IPR001036 Acriflavin resistance protein BED35_19385 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BED35_19390 IPR006143 RND efflux pump, membrane fusion protein BED35_19390 IPR032317 BED35_19390 BED35_19395 IPR003876 Arginine deiminase BED35_19405 IPR007016 O-antigen ligase-related BED35_19410 IPR002201 Glycosyl transferase, family 9 BED35_19410 IPR011916 Lipopolysaccharide heptosyltransferase III, putative BED35_19415 IPR000577 BED35_19415 BED35_19415 IPR018484 Carbohydrate kinase, FGGY, N-terminal BED35_19415 IPR018485 Carbohydrate kinase, FGGY, C-terminal BED35_19415 IPR033676 BED35_19415 BED35_19420 IPR007324 Sugar-binding domain, putative BED35_19420 IPR036388 BED35_19420 BED35_19420 IPR037171 BED35_19420 BED35_19425 IPR003439 ABC transporter-like BED35_19425 IPR003593 AAA+ ATPase domain BED35_19425 IPR017871 ABC transporter, conserved site BED35_19425 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_19430 IPR001851 ABC transporter, permease BED35_19435 IPR001851 ABC transporter, permease BED35_19440 IPR025997 Periplasmic binding protein domain BED35_19440 IPR028082 Periplasmic binding protein-like I BED35_19445 IPR002915 DeoC/FbaB/ lacD aldolase BED35_19445 IPR013785 Aldolase-type TIM barrel BED35_19445 IPR033673 BED35_19445 BED35_19450 IPR007138 Antibiotic biosynthesis monooxygenase-like domain BED35_19450 IPR011008 Dimeric alpha-beta barrel BED35_19450 IPR033672 BED35_19450 BED35_19455 IPR029058 Alpha/Beta hydrolase fold BED35_19460 IPR019637 Protein of unknown function DUF2501 BED35_19465 IPR001207 Transposase, mutator type BED35_19470 IPR010546 Protein of unknown function DUF1120 BED35_19475 IPR002514 Transposase IS3/IS911family BED35_19475 IPR009057 Homeodomain-like BED35_19495 IPR005495 Permease YjgP/YjgQ, predicted BED35_19495 IPR030923 BED35_19495 BED35_19500 IPR005495 Permease YjgP/YjgQ, predicted BED35_19500 IPR030922 BED35_19500 BED35_19505 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal BED35_19505 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal BED35_19505 IPR011356 Leucine aminopeptidase/peptidase B BED35_19505 IPR023042 Peptidase M17, leucine aminopeptidase BED35_19510 IPR007459 DNA polymerase III chi subunit, HolC BED35_19510 IPR036768 BED35_19510 BED35_19515 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site BED35_19515 IPR002300 Aminoacyl-tRNA synthetase, class Ia BED35_19515 IPR002303 Valine-tRNA ligase BED35_19515 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain BED35_19515 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding BED35_19515 IPR010978 tRNA-binding arm BED35_19515 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding BED35_19515 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED35_19515 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm BED35_19515 IPR037118 BED35_19515 BED35_19520 IPR000182 GNAT domain BED35_19520 IPR016181 Acyl-CoA N-acyltransferase BED35_19525 IPR009671 Regulator of ribonuclease activity B domain BED35_19525 IPR016716 Regulator of ribonuclease activity B BED35_19525 IPR036701 BED35_19525 BED35_19530 IPR002292 Ornithine/putrescine carbamoyltransferase BED35_19530 IPR006130 Aspartate/ornithine carbamoyltransferase BED35_19530 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain BED35_19530 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding BED35_19530 IPR024904 Ornithine carbamoyltransferase BED35_19530 IPR036901 BED35_19530 BED35_19535 IPR004375 Conserved hypothetical protein CHP00022 BED35_19535 IPR037012 BED35_19535 BED35_19540 IPR000914 Bacterial extracellular solute-binding protein, family 5 BED35_19540 IPR030678 BED35_19540 BED35_19545 IPR000515 MetI-like domain BED35_19545 IPR035906 BED35_19545 BED35_19550 IPR000515 MetI-like domain BED35_19550 IPR025966 Oligopeptide transport permease C-like, N-terminal domain BED35_19550 IPR035906 BED35_19550 BED35_19555 IPR003439 ABC transporter-like BED35_19555 IPR003593 AAA+ ATPase domain BED35_19555 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_19560 IPR003439 ABC transporter-like BED35_19560 IPR003593 AAA+ ATPase domain BED35_19560 IPR017871 ABC transporter, conserved site BED35_19560 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_19565 IPR005119 LysR, substrate-binding BED35_19575 IPR001989 Radical-activating enzyme, conserved site BED35_19575 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic BED35_19575 IPR013785 Aldolase-type TIM barrel BED35_19580 IPR005565 Haemolysin activator HlyB BED35_19580 IPR013686 Polypeptide-transport-associated, ShlB-type BED35_19585 IPR031929 BED35_19585 BED35_19590 IPR000524 Transcription regulator HTH, GntR BED35_19590 IPR011663 UbiC transcription regulator-associated BED35_19590 IPR012702 Phosphonate C-P lyase system, transcriptional regulator PhnF BED35_19590 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain BED35_19590 IPR036388 BED35_19590 BED35_19590 IPR036390 BED35_19590 BED35_19595 IPR009609 Phosphonate metabolism PhnG BED35_19600 IPR008772 Bacterial phosphonate metabolism, PhnH BED35_19600 IPR038058 BED35_19600 BED35_19605 IPR008773 Phosphonate metabolism protein PhnI BED35_19610 IPR010306 Phosphonate metabolism PhnJ BED35_19615 IPR003439 ABC transporter-like BED35_19615 IPR003593 AAA+ ATPase domain BED35_19615 IPR012700 Phosphonate C-P lyase system, PhnK BED35_19615 IPR017871 ABC transporter, conserved site BED35_19615 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_19620 IPR003439 ABC transporter-like BED35_19620 IPR003593 AAA+ ATPase domain BED35_19620 IPR012701 Phosphonate C-P lyase system, PhnL BED35_19620 IPR017871 ABC transporter, conserved site BED35_19620 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_19625 IPR011059 Metal-dependent hydrolase, composite domain BED35_19625 IPR012696 Phosphonate metabolism PhnM BED35_19625 IPR013108 Amidohydrolase 3 BED35_19625 IPR032466 BED35_19625 BED35_19635 IPR001279 Beta-lactamase-like BED35_19635 IPR017693 Phosphonate metabolism protein PhnP BED35_19635 IPR036866 BED35_19635 BED35_19640 IPR036291 BED35_19640 BED35_19645 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family BED35_19645 IPR035093 BED35_19645 BED35_19650 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM BED35_19650 IPR036165 BED35_19650 BED35_19655 IPR011194 Uncharacterised protein family UPF0306 BED35_19655 IPR012349 FMN-binding split barrel BED35_19660 IPR008397 Alginate lyase domain BED35_19660 IPR008929 Chondroitin AC/alginate lyase BED35_19665 IPR003439 ABC transporter-like BED35_19665 IPR003593 AAA+ ATPase domain BED35_19665 IPR008995 Molybdate/tungstate binding, C-terminal BED35_19665 IPR013611 Transport-associated OB, type 2 BED35_19665 IPR017871 ABC transporter, conserved site BED35_19665 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_19670 IPR000515 MetI-like domain BED35_19670 IPR035906 BED35_19670 BED35_19675 IPR000515 MetI-like domain BED35_19675 IPR035906 BED35_19675 BED35_19680 IPR006059 Bacterial extracellular solute-binding, family 1 BED35_19685 IPR008397 Alginate lyase domain BED35_19685 IPR008929 Chondroitin AC/alginate lyase BED35_19690 IPR008929 Chondroitin AC/alginate lyase BED35_19690 IPR012480 Heparinase II/III-like BED35_19695 IPR000310 Orn/Lys/Arg decarboxylase, major domain BED35_19695 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal BED35_19695 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal BED35_19695 IPR011006 CheY-like superfamily BED35_19695 IPR011193 Ornithine/lysine/arginine decarboxylase BED35_19695 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BED35_19695 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 BED35_19695 IPR015424 Pyridoxal phosphate-dependent transferase BED35_19695 IPR027464 Ornithine decarboxylase, N-terminal domain BED35_19695 IPR027568 Ornithine decarboxylase SpeF BED35_19695 IPR036633 BED35_19695 BED35_19700 IPR002293 Amino acid/polyamine transporter I BED35_19700 IPR004754 Amino acid antiporter BED35_19700 IPR027566 Putrescine-ornithine antiporter BED35_19710 IPR000182 GNAT domain BED35_19710 IPR016181 Acyl-CoA N-acyltransferase BED35_19715 IPR003033 SCP2 sterol-binding domain BED35_19715 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT BED35_19715 IPR036527 BED35_19715 BED35_19720 IPR001539 Peptidase U32 BED35_19720 IPR036206 BED35_19720 BED35_19725 IPR001539 Peptidase U32 BED35_19730 IPR005130 Serine dehydratase-like, alpha subunit BED35_19730 IPR021144 Uncharacterised protein family UPF0597 BED35_19740 IPR003423 Outer membrane efflux protein BED35_19740 IPR010131 RND efflux system, outer membrane lipoprotein, NodT BED35_19740 IPR039562 BED35_19740 BED35_19745 IPR011251 Luciferase-like domain BED35_19745 IPR019949 Luciferase family oxidoreductase, group 1 BED35_19745 IPR036661 BED35_19745 BED35_19755 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site BED35_19755 IPR001650 Helicase, C-terminal BED35_19755 IPR005580 DbpA, RNA-binding BED35_19755 IPR011545 DEAD/DEAH box helicase domain BED35_19755 IPR012677 Nucleotide-binding, alpha-beta plait BED35_19755 IPR014001 Helicase, superfamily 1/2, ATP-binding domain BED35_19755 IPR021046 Cold-shock protein, DEAD box A, C-terminal BED35_19755 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_19755 IPR028618 ATP-dependent RNA helicase DeaD BED35_19760 IPR011990 Tetratricopeptide-like helical domain BED35_19760 IPR013105 Tetratricopeptide TPR2 BED35_19760 IPR019734 Tetratricopeptide repeat BED35_19760 IPR023605 Lipoprotein NlpI BED35_19765 IPR001247 Exoribonuclease, phosphorolytic domain 1 BED35_19765 IPR003029 Ribosomal protein S1, RNA-binding domain BED35_19765 IPR004087 K Homology domain BED35_19765 IPR004088 K Homology domain, type 1 BED35_19765 IPR012162 Polyribonucleotide nucleotidyltransferase BED35_19765 IPR012340 Nucleic acid-binding, OB-fold BED35_19765 IPR015847 Exoribonuclease, phosphorolytic domain 2 BED35_19765 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain BED35_19765 IPR020568 Ribosomal protein S5 domain 2-type fold BED35_19765 IPR022967 RNA-binding domain, S1 BED35_19765 IPR027408 PNPase/RNase PH domain BED35_19765 IPR036345 BED35_19765 BED35_19765 IPR036456 BED35_19765 BED35_19765 IPR036612 BED35_19765 BED35_19770 IPR000589 Ribosomal protein S15 BED35_19770 IPR005290 Ribosomal protein S15, bacterial-type BED35_19770 IPR009068 S15/NS1, RNA-binding BED35_19775 IPR002501 Pseudouridine synthase II BED35_19775 IPR014780 tRNA pseudouridine synthase II, TruB BED35_19775 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal BED35_19775 IPR015947 PUA-like domain BED35_19775 IPR020103 Pseudouridine synthase, catalytic domain BED35_19775 IPR032819 BED35_19775 BED35_19775 IPR036974 BED35_19775 BED35_19780 IPR000238 Ribosome-binding factor A BED35_19780 IPR015946 K homology domain-like, alpha/beta BED35_19780 IPR020053 Ribosome-binding factor A, conserved site BED35_19780 IPR023799 Ribosome-binding factor A domain BED35_19785 IPR000178 Translation initiation factor aIF-2, bacterial-like BED35_19785 IPR000795 Elongation factor, GTP-binding domain BED35_19785 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 BED35_19785 IPR005225 Small GTP-binding protein domain BED35_19785 IPR006847 Translation initiation factor IF-2, N-terminal BED35_19785 IPR009000 Translation protein, beta-barrel domain BED35_19785 IPR009061 DNA binding domain, putative BED35_19785 IPR013575 Initiation factor 2 associated domain, bacterial BED35_19785 IPR023115 Translation initiation factor IF- 2, domain 3 BED35_19785 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_19785 IPR036925 BED35_19785 BED35_19790 IPR004087 K Homology domain BED35_19790 IPR009019 K homology domain, prokaryotic type BED35_19790 IPR010213 Transcription termination factor NusA BED35_19790 IPR010214 Transcription termination factor NusA, C-terminal duplication BED35_19790 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical BED35_19790 IPR012340 Nucleic acid-binding, OB-fold BED35_19790 IPR013735 Transcription factor NusA, N-terminal BED35_19790 IPR015946 K homology domain-like, alpha/beta BED35_19790 IPR022967 RNA-binding domain, S1 BED35_19790 IPR025249 KH domain, NusA-like BED35_19790 IPR030842 BED35_19790 BED35_19790 IPR036555 BED35_19790 BED35_19795 IPR003728 Ribosome maturation factor RimP BED35_19795 IPR028989 Ribosome maturation factor RimP, N-terminal BED35_19795 IPR028998 Ribosome maturation factor RimP, C-terminal BED35_19795 IPR035956 BED35_19795 BED35_19795 IPR036847 BED35_19795 BED35_19810 IPR004692 Preprotein translocase SecG subunit BED35_19815 IPR005841 Alpha-D-phosphohexomutase superfamily BED35_19815 IPR005843 Alpha-D-phosphohexomutase, C-terminal BED35_19815 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I BED35_19815 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II BED35_19815 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III BED35_19815 IPR006352 Phosphoglucosamine mutase BED35_19815 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III BED35_19815 IPR016066 Alpha-D-phosphohexomutase, conserved site BED35_19815 IPR036900 BED35_19815 BED35_19820 IPR000489 Pterin-binding BED35_19820 IPR006390 Dihydropteroate synthase BED35_19820 IPR011005 Dihydropteroate synthase-like BED35_19825 IPR000642 Peptidase M41 BED35_19825 IPR003593 AAA+ ATPase domain BED35_19825 IPR003959 ATPase, AAA-type, core BED35_19825 IPR003960 ATPase, AAA-type, conserved site BED35_19825 IPR005936 Peptidase, FtsH BED35_19825 IPR011546 Peptidase M41, FtsH extracellular BED35_19825 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_19825 IPR037219 BED35_19825 BED35_19830 IPR002877 Ribosomal RNA methyltransferase FtsJ domain BED35_19830 IPR004512 Ribosomal RNA methyltransferase E, gammaproteobacteria BED35_19830 IPR015507 Ribosomal RNA large subunit methyltransferase E BED35_19830 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BED35_19835 IPR001890 RNA-binding, CRM domain BED35_19835 IPR017924 RNA-binding protein YhbY BED35_19835 IPR035920 BED35_19835 BED35_19840 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal BED35_19840 IPR006359 Transcription elongation factor GreA BED35_19840 IPR018151 Transcription elongation factor, GreA/GreB, conserved site BED35_19840 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal BED35_19840 IPR023459 Transcription elongation factor GreA/GreB family BED35_19840 IPR028624 Transcription elongation factor GreA/GreB BED35_19840 IPR036805 BED35_19840 BED35_19840 IPR036953 BED35_19840 BED35_19845 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C BED35_19845 IPR012338 Beta-lactamase/transpeptidase-like BED35_19850 IPR001789 Signal transduction response regulator, receiver domain BED35_19850 IPR001867 Signal transduction response regulator, C-terminal BED35_19850 IPR011006 CheY-like superfamily BED35_19850 IPR036388 BED35_19850 BED35_19855 IPR003594 Histidine kinase-like ATPase, C-terminal domain BED35_19855 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain BED35_19855 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BED35_19855 IPR036097 BED35_19855 BED35_19855 IPR036890 BED35_19855 BED35_19860 IPR006073 GTP binding domain BED35_19860 IPR006074 GTP1/OBG, conserved site BED35_19860 IPR006169 GTP1/OBG domain BED35_19860 IPR014100 GTP-binding protein Obg/CgtA BED35_19860 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_19860 IPR035101 BED35_19860 BED35_19860 IPR036726 BED35_19860 BED35_19865 IPR000620 Drug/metabolite transporter BED35_19870 IPR001684 Ribosomal protein L27 BED35_19870 IPR018261 Ribosomal protein L27, conserved site BED35_19875 IPR001787 Ribosomal protein L21 BED35_19875 IPR018258 Ribosomal protein L21, conserved site BED35_19875 IPR028909 Ribosomal protein L21-like BED35_19875 IPR036164 BED35_19875 BED35_19880 IPR000092 Polyprenyl synthetase BED35_19880 IPR008949 Terpenoid synthase BED35_19880 IPR033749 BED35_19880 BED35_19885 IPR003314 Transposase MuA/Repressor CI, DNA-binding BED35_19885 IPR009061 DNA binding domain, putative BED35_19885 IPR010749 Protein of unknown function DUF1323 BED35_19885 IPR036388 BED35_19885 BED35_19890 IPR010982 Lambda repressor-like, DNA-binding domain BED35_19890 IPR038722 BED35_19890 BED35_19895 IPR001236 Lactate/malate dehydrogenase, N-terminal BED35_19895 IPR001252 Malate dehydrogenase, active site BED35_19895 IPR001557 L-lactate/malate dehydrogenase BED35_19895 IPR010097 Malate dehydrogenase, type 1 BED35_19895 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal BED35_19895 IPR022383 Lactate/malate dehydrogenase, C-terminal BED35_19895 IPR023958 Malate dehydrogenase, type 1, bacterial BED35_19895 IPR036291 BED35_19895 BED35_19900 IPR001669 Arginine repressor BED35_19900 IPR020899 Arginine repressor, C-terminal BED35_19900 IPR020900 Arginine repressor, DNA-binding domain BED35_19900 IPR036251 BED35_19900 BED35_19900 IPR036388 BED35_19900 BED35_19900 IPR036390 BED35_19900 BED35_19905 IPR010854 Domain of unknown function DUF1471 BED35_19905 IPR025543 Dodecin-like BED35_19905 IPR036275 BED35_19905 BED35_19910 IPR000713 Mur ligase, N-terminal BED35_19910 IPR004101 Mur ligase, C-terminal BED35_19910 IPR005757 Murein peptide ligase BED35_19910 IPR013221 Mur ligase, central BED35_19910 IPR036565 BED35_19910 BED35_19910 IPR036615 BED35_19910 BED35_19915 IPR000146 Fructose-1,6-bisphosphatase class 1/Sedoheputulose-1,7-bisphosphatase BED35_19915 IPR020548 Fructose-1,6-bisphosphatase, active site BED35_19915 IPR028343 Fructose-1,6-bisphosphatase BED35_19915 IPR033391 BED35_19915 BED35_19920 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding BED35_19920 IPR003660 HAMP linker domain BED35_19920 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BED35_19920 IPR004090 Chemotaxis methyl-accepting receptor BED35_19920 IPR035440 BED35_19920 BED35_19925 IPR008162 Inorganic pyrophosphatase BED35_19925 IPR036649 BED35_19925 BED35_19930 IPR009288 AIG2-like BED35_19930 IPR036568 BED35_19930 BED35_19935 IPR007452 Protein of unknown function DUF490 BED35_19940 IPR000184 Bacterial surface antigen (D15) BED35_19940 IPR010827 Surface antigen variable number BED35_19940 IPR035243 BED35_19940 BED35_19945 IPR002569 Peptide methionine sulphoxide reductase MsrA BED35_19945 IPR036509 BED35_19945 BED35_19950 IPR000644 CBS domain BED35_19950 IPR002550 Domain of unknown function DUF21 BED35_19950 IPR005170 Transporter-associated domain BED35_19950 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 BED35_19950 IPR036318 BED35_19950 BED35_19955 IPR009491 Protein of unknown function DUF1107 BED35_19960 IPR006513 Conserved hypothetical protein CHP01626, YtfJ BED35_19965 IPR000760 Inositol monophosphatase BED35_19965 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial BED35_19965 IPR020550 Inositol monophosphatase, conserved site BED35_19965 IPR020583 Inositol monophosphatase, metal-binding site BED35_19970 IPR004843 Calcineurin-like phosphoesterase domain, apaH type BED35_19970 IPR006146 5'-Nucleotidase, conserved site BED35_19970 IPR006179 5'-Nucleotidase/apyrase BED35_19970 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase BED35_19970 IPR008334 5'-Nucleotidase, C-terminal BED35_19970 IPR029052 Metallo-dependent phosphatase-like BED35_19970 IPR036907 BED35_19970 BED35_19980 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal BED35_19980 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain BED35_19980 IPR036944 BED35_19980 BED35_19985 IPR007340 Opacity-associated protein A BED35_19985 IPR013731 Opacity-associated protein A, N-terminal BED35_19990 IPR022231 Protein of unknown function DUF3757 BED35_19995 IPR009027 Ribosomal protein L9/RNase H1, N-terminal BED35_19995 IPR020069 Ribosomal protein L9, C-terminal BED35_19995 IPR020070 Ribosomal protein L9, N-terminal BED35_19995 IPR020594 Ribosomal protein L9, bacteria/chloroplast BED35_19995 IPR036791 BED35_19995 BED35_19995 IPR036935 BED35_19995 BED35_20000 IPR001648 Ribosomal protein S18 BED35_20000 IPR018275 Ribosomal protein S18, conserved site BED35_20000 IPR036870 BED35_20000 BED35_20005 IPR000424 Primosome PriB/single-strand DNA-binding BED35_20005 IPR012340 Nucleic acid-binding, OB-fold BED35_20005 IPR023646 Primosomal replication protein PriB BED35_20010 IPR000529 Ribosomal protein S6 BED35_20010 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 BED35_20010 IPR020814 Ribosomal protein S6, plastid/chloroplast BED35_20010 IPR020815 Ribosomal protein S6, conserved site BED35_20010 IPR035980 BED35_20010 BED35_20015 IPR010854 Domain of unknown function DUF1471 BED35_20015 IPR025543 Dodecin-like BED35_20015 IPR036275 BED35_20015 BED35_20020 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain BED35_20020 IPR029058 Alpha/Beta hydrolase fold BED35_20025 IPR010854 Domain of unknown function DUF1471 BED35_20025 IPR025543 Dodecin-like BED35_20025 IPR036275 BED35_20025 BED35_20030 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal BED35_20030 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain BED35_20030 IPR036250 BED35_20030 BED35_20035 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED35_20035 IPR003346 Transposase, IS116/IS110/IS902 BED35_20040 IPR001537 tRNA/rRNA methyltransferase, SpoU type BED35_20040 IPR004441 RNA methyltransferase TrmH family BED35_20040 IPR013123 RNA 2-O ribose methyltransferase, substrate binding BED35_20040 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB BED35_20040 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BED35_20040 IPR029028 Alpha/beta knot methyltransferases BED35_20040 IPR029064 50S ribosomal protein L30e-like BED35_20045 IPR001900 BED35_20045 BED35_20045 IPR003029 Ribosomal protein S1, RNA-binding domain BED35_20045 IPR004476 Ribonuclease II/ribonuclease R BED35_20045 IPR011129 Cold shock protein BED35_20045 IPR011805 Ribonuclease R BED35_20045 IPR012340 Nucleic acid-binding, OB-fold BED35_20045 IPR013223 Ribonuclease B, N-terminal OB domain BED35_20045 IPR013668 Ribonuclease R winged-helix domain BED35_20045 IPR022967 RNA-binding domain, S1 BED35_20050 IPR000944 Transcription regulator Rrf2-like BED35_20050 IPR030489 BED35_20050 BED35_20050 IPR036388 BED35_20050 BED35_20050 IPR036390 BED35_20050 BED35_20055 IPR001114 Adenylosuccinate synthetase BED35_20055 IPR018220 Adenylosuccinate synthase, active site BED35_20055 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_20055 IPR033128 BED35_20055 BED35_20060 IPR019201 Protein of unknown function DUF2065 BED35_20065 IPR001107 Band 7 protein BED35_20065 IPR010200 HflC BED35_20065 IPR036013 BED35_20065 BED35_20070 IPR001107 Band 7 protein BED35_20070 IPR001972 Stomatin family BED35_20070 IPR010201 HflK BED35_20070 IPR020980 Menbrane protein HflK, N-terminal BED35_20070 IPR036013 BED35_20070 BED35_20075 IPR006073 GTP binding domain BED35_20075 IPR016496 GTPase HflX BED35_20075 IPR025121 GTPase HflX N-terminal domain BED35_20075 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_20075 IPR032305 BED35_20075 BED35_20075 IPR035647 BED35_20075 BED35_20080 IPR005001 Host factor Hfq BED35_20080 IPR010920 Like-Sm (LSM) domain BED35_20085 IPR018022 tRNA delta(2)-isopentenylpyrophosphate transferase BED35_20085 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_20090 IPR002099 DNA mismatch repair protein family BED35_20090 IPR013507 DNA mismatch repair protein, C-terminal BED35_20090 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BED35_20090 IPR014762 DNA mismatch repair, conserved site BED35_20090 IPR014790 MutL, C-terminal, dimerisation BED35_20090 IPR020568 Ribosomal protein S5 domain 2-type fold BED35_20090 IPR020667 DNA mismatch repair protein, MutL BED35_20090 IPR036890 BED35_20090 BED35_20090 IPR037198 BED35_20090 BED35_20095 IPR002508 Cell wall hydrolase/autolysin, catalytic BED35_20095 IPR018392 LysM domain BED35_20095 IPR021731 AMIN domain BED35_20095 IPR036779 BED35_20095 BED35_20100 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE BED35_20100 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_20105 IPR000631 YjeF C-terminal domain BED35_20105 IPR004443 YjeF N-terminal domain BED35_20105 IPR029056 Ribokinase-like BED35_20105 IPR030677 BED35_20105 BED35_20105 IPR036652 BED35_20105 BED35_20110 IPR004453 Epoxyqueuosine reductase QueG BED35_20110 IPR009051 Alpha-helical ferredoxin BED35_20110 IPR013542 Domain of unknown function DUF1730 BED35_20110 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BED35_20125 IPR012337 Ribonuclease H-like domain BED35_20125 IPR013520 Exonuclease, RNase T/DNA polymerase III BED35_20125 IPR022894 Oligoribonuclease BED35_20125 IPR036397 BED35_20125 BED35_20130 IPR004881 Ribosome biogenesis GTPase RsgA, putative BED35_20130 IPR010914 EngC GTPase BED35_20130 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_20135 IPR003817 Phosphatidylserine decarboxylase-related BED35_20135 IPR033177 BED35_20135 BED35_20135 IPR033178 BED35_20135 BED35_20140 IPR006685 Mechanosensitive ion channel MscS BED35_20140 IPR006686 Mechanosensitive ion channel MscS, conserved site BED35_20140 IPR010920 Like-Sm (LSM) domain BED35_20140 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 BED35_20140 IPR011066 Mechanosensitive ion channel MscS, C-terminal BED35_20140 IPR023408 BED35_20140 BED35_20140 IPR024393 Mechanosensitive ion channel MscS, porin domain BED35_20140 IPR025692 Mechanosensitive ion channel inner membrane domain 1 BED35_20145 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) BED35_20145 IPR004525 Elongation factor P--(R)-beta-lysine ligase BED35_20145 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal BED35_20150 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site BED35_20150 IPR003953 FAD binding domain BED35_20150 IPR005884 Fumarate reductase, flavoprotein subunit BED35_20150 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit BED35_20150 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal BED35_20150 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain BED35_20150 IPR036188 BED35_20150 BED35_20150 IPR037099 BED35_20150 BED35_20155 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein BED35_20155 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site BED35_20155 IPR009051 Alpha-helical ferredoxin BED35_20155 IPR012675 Beta-grasp domain BED35_20155 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BED35_20155 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BED35_20155 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal BED35_20155 IPR036010 BED35_20155 BED35_20160 IPR003510 Fumarate reductase, subunit C BED35_20160 IPR034804 BED35_20160 BED35_20165 IPR003418 Fumarate reductase, D subunit BED35_20165 IPR034804 BED35_20165 BED35_20170 IPR000566 Lipocalin/cytosolic fatty-acid binding domain BED35_20170 IPR002446 Lipocalin, bacterial BED35_20170 IPR012674 Calycin BED35_20170 IPR022271 Lipocalin, ApoD type BED35_20170 IPR022272 Lipocalin family conserved site BED35_20175 IPR000390 Small multidrug resistance protein family BED35_20180 IPR012556 Entericidin EcnAB BED35_20185 IPR001059 Translation elongation factor P/YeiP, central BED35_20185 IPR008991 Translation protein SH3-like domain BED35_20185 IPR011768 Translation elongation factor P BED35_20185 IPR012340 Nucleic acid-binding, OB-fold BED35_20185 IPR013185 Translation elongation factor, KOW-like BED35_20185 IPR013852 Translation elongation factor P/YeiP, conserved site BED35_20185 IPR014722 Ribosomal protein L2 domain 2 BED35_20185 IPR015365 Elongation factor P, C-terminal BED35_20185 IPR020599 Translation elongation factor P/YeiP BED35_20190 IPR003739 Lysine-2,3-aminomutase family BED35_20190 IPR007197 Radical SAM BED35_20190 IPR013785 Aldolase-type TIM barrel BED35_20190 IPR022462 Lysine-2,3-aminomutase-like BED35_20195 IPR025294 Protein of unknown function DUF4156 BED35_20205 IPR001844 Chaperonin Cpn60 BED35_20205 IPR002423 Chaperonin Cpn60/TCP-1 BED35_20205 IPR018370 Chaperonin Cpn60, conserved site BED35_20205 IPR027409 GroEL-like apical domain BED35_20205 IPR027410 TCP-1-like chaperonin intermediate domain BED35_20205 IPR027413 GroEL-like equatorial domain BED35_20210 IPR011032 GroES (chaperonin 10)-like BED35_20210 IPR018369 Chaperonin Cpn10, conserved site BED35_20210 IPR020818 Chaperonin Cpn10 BED35_20210 IPR037124 BED35_20210 BED35_20215 IPR007313 FxsA cytoplasmic membrane protein BED35_20220 IPR000362 Fumarate lyase family BED35_20220 IPR004708 Aspartate ammonia-lyase BED35_20220 IPR008948 L-Aspartase-like BED35_20220 IPR018951 Fumarase C, C-terminal BED35_20220 IPR020557 Fumarate lyase, conserved site BED35_20220 IPR022761 Fumarate lyase, N-terminal BED35_20220 IPR024083 Fumarase/histidase, N-terminal BED35_20225 IPR004668 Anaerobic c4-dicarboxylate membrane transporter BED35_20230 IPR004323 Divalent ion tolerance protein, CutA BED35_20230 IPR011322 Nitrogen regulatory PII-like, alpha/beta BED35_20230 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BED35_20230 IPR023700 Divalent cation tolerance protein CutA, bacteria BED35_20235 IPR003834 Cytochrome c assembly protein, transmembrane domain BED35_20235 IPR017937 Thioredoxin, conserved site BED35_20235 IPR022910 Thiol:disulphide interchange protein DsbD BED35_20235 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain BED35_20235 IPR036249 BED35_20235 BED35_20235 IPR036929 BED35_20235 BED35_20240 IPR004381 Glycerate kinase BED35_20240 IPR018193 Glycerate kinase, flavodoxin-like domain BED35_20240 IPR018197 Glycerate kinase, restriction-enzyme-like fold BED35_20240 IPR036129 BED35_20240 BED35_20245 IPR001647 DNA-binding HTH domain, TetR-type BED35_20245 IPR009057 Homeodomain-like BED35_20245 IPR036271 BED35_20245 BED35_20255 IPR001150 Glycine radical domain BED35_20255 IPR004184 Pyruvate formate lyase domain BED35_20255 IPR005949 Formate acetyltransferase BED35_20255 IPR019777 Formate C-acetyltransferase glycine radical, conserved site BED35_20260 IPR000890 Aliphatic acid kinase, short-chain BED35_20260 IPR004372 Acetate/Proprionate kinase BED35_20260 IPR023865 Aliphatic acid kinase, short-chain, conserved site BED35_20260 IPR024917 Propionate kinase BED35_20265 IPR004694 Hydroxy amino acid transporter BED35_20265 IPR013057 Amino acid transporter, transmembrane BED35_20265 IPR023726 Threonine/serine transporter TdcC BED35_20270 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site BED35_20270 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme BED35_20270 IPR005789 Threonine dehydratase, catabolic BED35_20270 IPR036052 BED35_20270 BED35_20275 IPR006638 Elongator protein 3/MiaB/NifB BED35_20275 IPR007197 Radical SAM BED35_20275 IPR023404 Radical SAM, alpha/beta horseshoe BED35_20275 IPR026332 Putative heme utilization radical SAM enzyme HutW BED35_20280 IPR010413 Heme utilization carrier protein HutX like BED35_20285 IPR016040 NAD(P)-binding domain BED35_20285 IPR036291 BED35_20285 BED35_20290 IPR019600 Hemin uptake protein HemP BED35_20295 IPR000531 TonB-dependent receptor, beta-barrel BED35_20295 IPR010916 TonB box, conserved site BED35_20295 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor BED35_20295 IPR011276 TonB-dependent haem/haemoglobin receptor BED35_20295 IPR012910 TonB-dependent receptor, plug BED35_20295 IPR036942 BED35_20295 BED35_20295 IPR037066 BED35_20295 BED35_20300 IPR007845 Haemin-degrading HemS/ChuX domain BED35_20305 IPR002491 ABC transporter periplasmic binding domain BED35_20310 IPR000522 ABC transporter, permease protein BED35_20310 IPR037294 BED35_20310 BED35_20315 IPR003439 ABC transporter-like BED35_20315 IPR003593 AAA+ ATPase domain BED35_20315 IPR017871 ABC transporter, conserved site BED35_20315 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_20325 IPR009506 Protein of unknown function DUF1127 BED35_20330 IPR000531 TonB-dependent receptor, beta-barrel BED35_20330 IPR010105 TonB-dependent siderophore receptor BED35_20330 IPR010917 TonB-dependent receptor, conserved site BED35_20330 IPR012910 TonB-dependent receptor, plug BED35_20330 IPR036942 BED35_20330 BED35_20330 IPR037066 BED35_20330 BED35_20345 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM BED35_20345 IPR036165 BED35_20345 BED35_20355 IPR003439 ABC transporter-like BED35_20355 IPR003593 AAA+ ATPase domain BED35_20355 IPR011527 ABC transporter type 1, transmembrane domain BED35_20355 IPR017871 ABC transporter, conserved site BED35_20355 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_20355 IPR036640 BED35_20355 BED35_20360 IPR011662 Secretin/TonB, short N-terminal BED35_20360 IPR012910 TonB-dependent receptor, plug BED35_20360 IPR036942 BED35_20360 BED35_20360 IPR037066 BED35_20360 BED35_20365 IPR006860 FecR protein BED35_20365 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component BED35_20365 IPR032623 BED35_20365 BED35_20370 IPR007627 RNA polymerase sigma-70 region 2 BED35_20370 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 BED35_20370 IPR013324 RNA polymerase sigma factor, region 3/4 BED35_20370 IPR013325 RNA polymerase sigma factor, region 2 BED35_20370 IPR014284 RNA polymerase sigma-70 like domain BED35_20370 IPR036388 BED35_20370 BED35_20380 IPR001455 TusA-like domain BED35_20380 IPR036868 BED35_20380 BED35_20385 IPR007272 Sulphur transport domain BED35_20390 IPR006135 Type III secretion system substrate exporter BED35_20390 IPR006307 Type III exporter system, secretion apparatus protein BsaZ BED35_20390 IPR029025 Type III secretion system substrate exporter, C-terminal BED35_20395 IPR002010 Type III secretion system inner membrane R protein BED35_20395 IPR006304 Type III secretion protein SpaR/YscT BED35_20400 IPR002191 Bacterial export protein family 3 BED35_20400 IPR006306 Type III secretion protein HrpO BED35_20405 IPR005773 Yop virulence translocation protein R BED35_20405 IPR005838 Type III secretion system inner membrane P protein BED35_20410 IPR001543 Surface presentation of antigen (SpoA) BED35_20410 IPR009532 SepQ BED35_20410 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO BED35_20410 IPR036429 BED35_20410 BED35_20425 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain BED35_20425 IPR003593 AAA+ ATPase domain BED35_20425 IPR005714 ATPase, type III secretion system, FliI/YscN BED35_20425 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site BED35_20425 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_20430 IPR001712 Type III secretion system FHIPEP BED35_20430 IPR006302 Type III secretion protein HrcV BED35_20430 IPR025505 FHIPEP conserved site BED35_20440 IPR010812 Hypersensitivity response secretion-like, HrpJ BED35_20440 IPR013351 Type III secretion system effector delivery regulator TyeA-related BED35_20440 IPR015144 Type III secretion system effector delivery regulator TyeA BED35_20440 IPR038347 BED35_20440 BED35_20445 IPR012842 Type III secretion system HrpE/YscL BED35_20450 IPR025292 Type III secretion system protein BED35_20455 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ BED35_20455 IPR006182 Secretory protein YscJ/FliF BED35_20465 IPR010437 Type III secretion system SsaH BED35_20470 IPR011841 Type III secretion system, needle protein BED35_20470 IPR021123 Type III secretion, needle-protein-like BED35_20470 IPR037203 BED35_20470 BED35_20475 IPR009057 Homeodomain-like BED35_20475 IPR018060 DNA binding HTH domain, AraC-type BED35_20475 IPR020449 Transcription regulator HTH, AraC- type BED35_20485 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD BED35_20485 IPR011990 Tetratricopeptide-like helical domain BED35_20490 IPR022797 Type III secretion system regulator LcrR/Chaperone CesD2 BED35_20495 IPR008611 Protein EaeB BED35_20500 IPR006972 Secretion system effector C, SseC-like BED35_20505 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD BED35_20505 IPR011990 Tetratricopeptide-like helical domain BED35_20505 IPR016379 Type III secretion system, low calcium response, chaperone LcrH/SycD, subgroup BED35_20510 IPR005095 EspA-like secreted protein BED35_20510 IPR035074 BED35_20510 BED35_20520 IPR012671 Type III secretion system, secretion protein E BED35_20525 IPR012843 Type III secretion system YscD/HrpQ BED35_20525 IPR032034 BED35_20525 BED35_20530 IPR003522 Type III secretion system outer membrane pore YscC/HrcC BED35_20530 IPR004845 Type II secretion system GspD, conserved site BED35_20530 IPR004846 Type II/III secretion system BED35_20530 IPR005644 NolW-like BED35_20530 IPR038591 BED35_20530 BED35_20545 IPR000792 Transcription regulator LuxR, C-terminal BED35_20545 IPR001789 Signal transduction response regulator, receiver domain BED35_20545 IPR011006 CheY-like superfamily BED35_20545 IPR016032 Signal transduction response regulator, C-terminal effector BED35_20550 IPR001991 Sodium:dicarboxylate symporter BED35_20550 IPR018107 Sodium:dicarboxylate symporter, conserved site BED35_20550 IPR034703 BED35_20550 BED35_20550 IPR036458 BED35_20550 BED35_20555 IPR000873 AMP-dependent synthetase/ligase BED35_20555 IPR011904 Acetate-CoA ligase BED35_20555 IPR020845 AMP-binding, conserved site BED35_20555 IPR025110 AMP-binding enzyme C-terminal domain BED35_20555 IPR032387 BED35_20555 BED35_20560 IPR007436 Protein of unknown function DUF485 BED35_20565 IPR001734 Sodium/solute symporter BED35_20565 IPR014083 Cation/acetate symporter ActP BED35_20565 IPR018212 Sodium/solute symporter, conserved site BED35_20565 IPR038377 BED35_20565 BED35_20610 IPR002695 AICARFT/IMPCHase bienzyme BED35_20610 IPR011607 Methylglyoxal synthase-like domain BED35_20610 IPR016193 Cytidine deaminase-like BED35_20610 IPR024051 AICAR transformylase domain BED35_20610 IPR036914 BED35_20610 BED35_20615 IPR000115 Phosphoribosylglycinamide synthetase BED35_20615 IPR011054 Rudiment single hybrid motif BED35_20615 IPR013815 ATP-grasp fold, subdomain 1 BED35_20615 IPR016185 Pre-ATP-grasp domain BED35_20615 IPR020559 Phosphoribosylglycinamide synthetase, conserved site BED35_20615 IPR020560 Phosphoribosylglycinamide synthetase, C-domain BED35_20615 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BED35_20615 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal BED35_20615 IPR037123 BED35_20615 BED35_20620 IPR010858 Protein of unknown function DUF1481 BED35_20625 IPR000119 Histone-like bacterial DNA-binding protein BED35_20625 IPR010992 Integration host factor (IHF)-like DNA-binding domain BED35_20625 IPR020816 Histone-like DNA-binding protein, conserved site BED35_20630 IPR007338 Protein of unknown function DUF416 BED35_20630 IPR023381 YP001051499.1-like domain BED35_20635 IPR007581 Endonuclease V BED35_20640 IPR000257 Uroporphyrinogen decarboxylase (URO-D) BED35_20640 IPR006361 Uroporphyrinogen decarboxylase HemE BED35_20640 IPR038071 BED35_20640 BED35_20645 IPR000086 NUDIX hydrolase domain BED35_20645 IPR015376 Zinc ribbon, NADH pyrophosphatase BED35_20645 IPR015797 NUDIX hydrolase domain-like BED35_20645 IPR020084 NUDIX hydrolase, conserved site BED35_20645 IPR022925 NADH pyrophosphatase NudC BED35_20650 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ BED35_20650 IPR023785 Regulator of RNA polymerase sigma(70) subunit, Rsd BED35_20650 IPR038309 BED35_20650 BED35_20655 IPR002817 Thiamine biosynthesis protein ThiC BED35_20655 IPR025747 ThiC-associated domain BED35_20655 IPR037509 BED35_20655 BED35_20655 IPR038521 BED35_20655 BED35_20660 IPR013785 Aldolase-type TIM barrel BED35_20660 IPR022998 Thiamin phosphate synthase superfamily BED35_20660 IPR034291 BED35_20660 BED35_20660 IPR036206 BED35_20660 BED35_20665 IPR000594 UBA/THIF-type NAD/FAD binding fold BED35_20665 IPR035985 BED35_20665 BED35_20670 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 BED35_20670 IPR010035 ThiS, thiamine-biosynthesis BED35_20670 IPR012675 Beta-grasp domain BED35_20670 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp BED35_20675 IPR008867 Thiazole biosynthesis BED35_20675 IPR013785 Aldolase-type TIM barrel BED35_20675 IPR033983 BED35_20675 BED35_20680 IPR007197 Radical SAM BED35_20680 IPR010722 Biotin and thiamin synthesis-associated domain BED35_20680 IPR012726 Thiazole biosynthesis ThiH BED35_20680 IPR013785 Aldolase-type TIM barrel BED35_20685 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED35_20685 IPR003346 Transposase, IS116/IS110/IS902 BED35_20690 IPR000722 RNA polymerase, alpha subunit BED35_20690 IPR006592 RNA polymerase, N-terminal BED35_20690 IPR007066 RNA polymerase Rpb1, domain 3 BED35_20690 IPR007080 RNA polymerase Rpb1, domain 1 BED35_20690 IPR007081 RNA polymerase Rpb1, domain 5 BED35_20690 IPR007083 RNA polymerase Rpb1, domain 4 BED35_20690 IPR012754 DNA-directed RNA polymerase, subunit beta-prime BED35_20690 IPR038120 BED35_20690 BED35_20695 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 BED35_20695 IPR007121 RNA polymerase, beta subunit, conserved site BED35_20695 IPR007641 RNA polymerase Rpb2, domain 7 BED35_20695 IPR007642 RNA polymerase Rpb2, domain 2 BED35_20695 IPR007644 RNA polymerase, beta subunit, protrusion BED35_20695 IPR007645 RNA polymerase Rpb2, domain 3 BED35_20695 IPR010243 DNA-directed RNA polymerase, beta subunit BED35_20695 IPR014724 RNA polymerase Rpb2, OB-fold BED35_20695 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain BED35_20695 IPR037033 BED35_20695 BED35_20695 IPR037034 BED35_20695 BED35_20700 IPR000206 Ribosomal protein L7/L12 BED35_20700 IPR008932 Ribosomal protein L7/L12, oligomerisation BED35_20700 IPR013823 Ribosomal protein L7/L12, C-terminal BED35_20700 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like BED35_20700 IPR036235 BED35_20700 BED35_20705 IPR001790 Ribosomal protein L10/acidic P0 BED35_20705 IPR002363 Ribosomal protein L10, eubacterial, conserved site BED35_20705 IPR022973 Ribosomal protein L10 BED35_20710 IPR002143 Ribosomal protein L1 BED35_20710 IPR005878 Ribosomal protein L1, bacterial-type BED35_20710 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich BED35_20710 IPR023673 Ribosomal protein L1, conserved site BED35_20710 IPR023674 Ribosomal protein L1-like BED35_20710 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein BED35_20715 IPR000911 Ribosomal protein L11/L12 BED35_20715 IPR006519 Ribosomal protein L11, bacterial-type BED35_20715 IPR020783 Ribosomal protein L11, C-terminal BED35_20715 IPR020784 Ribosomal protein L11, N-terminal BED35_20715 IPR020785 Ribosomal protein L11, conserved site BED35_20715 IPR036769 BED35_20715 BED35_20715 IPR036796 BED35_20715 BED35_20720 IPR001062 Transcription antitermination protein, NusG BED35_20720 IPR005824 KOW BED35_20720 IPR006645 NusG, N-terminal BED35_20720 IPR008991 Translation protein SH3-like domain BED35_20720 IPR014722 Ribosomal protein L2 domain 2 BED35_20720 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site BED35_20720 IPR036735 BED35_20720 BED35_20725 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit BED35_20725 IPR005807 SecE subunit of protein translocation complex BED35_20725 IPR038379 BED35_20725 BED35_20730 IPR000795 Elongation factor, GTP-binding domain BED35_20730 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal BED35_20730 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 BED35_20730 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle BED35_20730 IPR005225 Small GTP-binding protein domain BED35_20730 IPR009000 Translation protein, beta-barrel domain BED35_20730 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal BED35_20730 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_20730 IPR031157 BED35_20730 BED35_20765 IPR004566 Bacterial pantothenate kinase BED35_20765 IPR006083 Phosphoribulokinase/uridine kinase BED35_20765 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_20770 IPR003142 Biotin protein ligase, C-terminal BED35_20770 IPR004143 Biotin/lipoate A/B protein ligase BED35_20770 IPR004408 Biotin--acetyl-CoA-carboxylase ligase BED35_20770 IPR004409 Biotin operon repressor, helix-turn-helix domain BED35_20770 IPR008988 Transcriptional repressor, C-terminal BED35_20770 IPR013196 Helix-turn-helix, type 11 BED35_20770 IPR030855 BED35_20770 BED35_20770 IPR036388 BED35_20770 BED35_20770 IPR036390 BED35_20770 BED35_20775 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase BED35_20775 IPR006094 FAD linked oxidase, N-terminal BED35_20775 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal BED35_20775 IPR016167 FAD-binding, type 2, subdomain 1 BED35_20775 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 BED35_20775 IPR036318 BED35_20775 BED35_20775 IPR036635 BED35_20775 BED35_20780 IPR003346 Transposase, IS116/IS110/IS902 BED35_20785 IPR010921 Trp repressor/replication initiator BED35_20810 IPR001226 Flavodoxin, conserved site BED35_20810 IPR026816 Flavodoxin domain BED35_20810 IPR029039 Flavoprotein-like BED35_20815 IPR003445 Cation transporter BED35_20815 IPR004772 Potassium uptake protein TrkH family BED35_20820 IPR001498 Impact, N-terminal BED35_20820 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal BED35_20820 IPR015796 Impact family, bacterial/archaeal BED35_20820 IPR020568 Ribosomal protein S5 domain 2-type fold BED35_20820 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site BED35_20820 IPR035647 BED35_20820 BED35_20820 IPR036956 BED35_20820 BED35_20825 IPR000994 Peptidase M24, structural domain BED35_20825 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site BED35_20825 IPR022846 Xaa-Pro dipeptidase BED35_20825 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal BED35_20825 IPR036005 BED35_20825 BED35_20830 IPR001753 Crotonase superfamily BED35_20830 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal BED35_20830 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding BED35_20830 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site BED35_20830 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like BED35_20830 IPR012799 Fatty oxidation complex, alpha subunit FadB BED35_20830 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site BED35_20830 IPR029045 ClpP/crotonase-like domain BED35_20830 IPR036291 BED35_20830 BED35_20835 IPR002155 Thiolase BED35_20835 IPR012805 Acetyl-CoA C-acyltransferase FadA BED35_20835 IPR016039 Thiolase-like BED35_20835 IPR020610 Thiolase, active site BED35_20835 IPR020613 Thiolase, conserved site BED35_20835 IPR020615 Thiolase, acyl-enzyme intermediate active site BED35_20835 IPR020616 Thiolase, N-terminal BED35_20835 IPR020617 Thiolase, C-terminal BED35_20840 IPR001221 Phenol hydroxylase reductase BED35_20840 IPR001433 Oxidoreductase FAD/NAD(P)-binding BED35_20840 IPR008333 Oxidoreductase, FAD-binding domain BED35_20840 IPR017938 Riboflavin synthase-like beta-barrel BED35_20840 IPR039261 BED35_20840 BED35_20845 IPR002830 UbiD decarboxylyase family BED35_20845 IPR023677 3-octaprenyl-4-hydroxybenzoate carboxy-lyase BED35_20850 IPR006645 NusG, N-terminal BED35_20850 IPR010215 Transcription antitermination protein RfaH BED35_20850 IPR036735 BED35_20850 BED35_20855 IPR001731 Porphobilinogen synthase BED35_20855 IPR013785 Aldolase-type TIM barrel BED35_20855 IPR030656 BED35_20855 BED35_20860 IPR001130 TatD family BED35_20860 IPR018228 Deoxyribonuclease, TatD-related, conserved site BED35_20860 IPR024918 Tat-linked quality control protein TatD BED35_20860 IPR032466 BED35_20860 BED35_20865 IPR002033 Sec-independent periplasmic protein translocase TatC BED35_20865 IPR019820 Sec-independent periplasmic protein translocase, conserved site BED35_20870 IPR018448 Twin-arginine translocation protein TatB BED35_20875 IPR003369 Sec-independent protein translocase protein TatA/B/E BED35_20875 IPR006312 Sec-independent protein translocase protein TatA/E BED35_20880 IPR004147 UbiB domain BED35_20880 IPR010232 Probable protein kinase UbiB BED35_20880 IPR011009 Protein kinase-like domain BED35_20885 IPR003033 SCP2 sterol-binding domain BED35_20885 IPR036527 BED35_20885 BED35_20890 IPR004033 UbiE/COQ5 methyltransferase BED35_20890 IPR023576 UbiE/COQ5 methyltransferase, conserved site BED35_20890 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BED35_20905 IPR003706 Carbon starvation protein CstA BED35_20905 IPR025299 CstA C-terminal domain BED35_20910 IPR026893 Tyrosine/serine-protein phosphatase IphP-type BED35_20910 IPR029021 Protein-tyrosine phosphatase-like BED35_20915 IPR000845 Nucleoside phosphorylase domain BED35_20915 IPR010058 Uridine phosphorylase BED35_20915 IPR018016 Nucleoside phosphorylase, conserved site BED35_20915 IPR035994 BED35_20915 BED35_20920 IPR002925 Dienelactone hydrolase BED35_20920 IPR029058 Alpha/Beta hydrolase fold BED35_20925 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal BED35_20925 IPR006276 Cobalamin-independent methionine synthase BED35_20925 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal BED35_20925 IPR038071 BED35_20925 BED35_20930 IPR000847 Transcription regulator HTH, LysR BED35_20930 IPR005119 LysR, substrate-binding BED35_20930 IPR036388 BED35_20930 BED35_20930 IPR036390 BED35_20930 BED35_20935 IPR000620 Drug/metabolite transporter BED35_20935 IPR004779 Carboxylate/Amino Acid/Amine Transporter BED35_20940 IPR004776 Auxin efflux carrier BED35_20945 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain BED35_20945 IPR030395 BED35_20945 BED35_20950 IPR003439 ABC transporter-like BED35_20950 IPR003593 AAA+ ATPase domain BED35_20950 IPR008995 Molybdate/tungstate binding, C-terminal BED35_20950 IPR013611 Transport-associated OB, type 2 BED35_20950 IPR017871 ABC transporter, conserved site BED35_20950 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_20955 IPR000515 MetI-like domain BED35_20955 IPR035906 BED35_20955 BED35_20960 IPR000515 MetI-like domain BED35_20960 IPR035906 BED35_20960 BED35_20965 IPR006059 Bacterial extracellular solute-binding, family 1 BED35_20965 IPR006061 Bacterial extracellular solute-binding family 1, conserved site BED35_20970 IPR007540 Fimbrial major subunit, CS1-type BED35_20975 IPR032636 BED35_20975 BED35_20980 IPR008962 PapD-like BED35_20980 IPR013783 Immunoglobulin-like fold BED35_20980 IPR016147 PapD, N-terminal, bacterial BED35_20985 IPR013783 Immunoglobulin-like fold BED35_21000 IPR003439 ABC transporter-like BED35_21000 IPR003593 AAA+ ATPase domain BED35_21000 IPR017871 ABC transporter, conserved site BED35_21000 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_21000 IPR030660 BED35_21000 BED35_21005 IPR003439 ABC transporter-like BED35_21005 IPR003593 AAA+ ATPase domain BED35_21005 IPR017871 ABC transporter, conserved site BED35_21005 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_21005 IPR032823 BED35_21005 BED35_21010 IPR001851 ABC transporter, permease BED35_21010 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal BED35_21015 IPR001851 ABC transporter, permease BED35_21020 IPR000709 Leu/Ile/Val-binding protein BED35_21020 IPR028081 Leucine-binding protein domain BED35_21020 IPR028082 Periplasmic binding protein-like I BED35_21025 IPR000182 GNAT domain BED35_21025 IPR016181 Acyl-CoA N-acyltransferase BED35_21025 IPR032900 BED35_21025 BED35_21040 IPR000943 RNA polymerase sigma-70 BED35_21040 IPR007627 RNA polymerase sigma-70 region 2 BED35_21040 IPR007630 RNA polymerase sigma-70 region 4 BED35_21040 IPR009042 RNA polymerase sigma-70 region 1.2 BED35_21040 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria BED35_21040 IPR013324 RNA polymerase sigma factor, region 3/4 BED35_21040 IPR013325 RNA polymerase sigma factor, region 2 BED35_21040 IPR014284 RNA polymerase sigma-70 like domain BED35_21040 IPR036388 BED35_21040 BED35_21045 IPR003838 Permease FtsX-like BED35_21045 IPR004513 ABC transporter, cell division protein FtsX BED35_21050 IPR003439 ABC transporter-like BED35_21050 IPR003593 AAA+ ATPase domain BED35_21050 IPR005286 Cell division protein FtsE, ATP-binding BED35_21050 IPR017871 ABC transporter, conserved site BED35_21050 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_21055 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain BED35_21055 IPR003593 AAA+ ATPase domain BED35_21055 IPR004390 Signal-recognition particle receptor FtsY BED35_21055 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle BED35_21055 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_21055 IPR036225 BED35_21055 BED35_21060 IPR002052 DNA methylase, N-6 adenine-specific, conserved site BED35_21060 IPR004398 RNA methyltransferase, RsmD BED35_21060 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BED35_21065 IPR009525 Protein of unknown function DUF1145 BED35_21070 IPR019635 Protein of unknown function DUF2500 BED35_21075 IPR014949 Protein of unknown function DUF1820 BED35_21080 IPR012506 YhhN-like BED35_21085 IPR001757 Cation-transporting P-type ATPase BED35_21085 IPR006121 Heavy metal-associated domain, HMA BED35_21085 IPR008250 P-type ATPase, A domain BED35_21085 IPR017969 Heavy-metal-associated, conserved site BED35_21085 IPR018303 P-type ATPase, phosphorylation site BED35_21085 IPR023214 HAD-like domain BED35_21085 IPR023298 P-type ATPase, transmembrane domain BED35_21085 IPR023299 P-type ATPase, cytoplasmic domain N BED35_21085 IPR027256 Cation-transporting P-type ATPase, subfamily IB BED35_21085 IPR036163 BED35_21085 BED35_21085 IPR036412 BED35_21085 BED35_21090 IPR001455 TusA-like domain BED35_21090 IPR022931 Sulphurtransferase TusA BED35_21090 IPR036868 BED35_21090 BED35_21095 IPR003744 Protein of unknown function DUF165 BED35_21100 IPR014894 Protein DcrB BED35_21100 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich BED35_21105 IPR004017 Cysteine-rich domain BED35_21105 IPR009051 Alpha-helical ferredoxin BED35_21105 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit BED35_21105 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BED35_21105 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BED35_21110 IPR003953 FAD binding domain BED35_21110 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit BED35_21110 IPR036188 BED35_21110 BED35_21115 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase BED35_21115 IPR006076 FAD dependent oxidoreductase BED35_21115 IPR007419 BFD-like [2Fe-2S]-binding domain BED35_21115 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit BED35_21115 IPR036188 BED35_21115 BED35_21120 IPR000849 Sugar phosphate transporter BED35_21120 IPR005267 Glycerol-3-phosphate transporter BED35_21120 IPR011701 Major facilitator superfamily BED35_21120 IPR021159 Glycerate/sugar phosphate transporter, conserved site BED35_21120 IPR036259 BED35_21120 BED35_21125 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain BED35_21125 IPR030395 BED35_21125 BED35_21130 IPR000150 Cof protein BED35_21130 IPR006379 HAD-superfamily hydrolase, subfamily IIB BED35_21130 IPR023214 HAD-like domain BED35_21130 IPR036412 BED35_21130 BED35_21135 IPR022742 Putative lysophospholipase BED35_21135 IPR029058 Alpha/Beta hydrolase fold BED35_21140 IPR001123 Lysine-type exporter protein (LYSE/YGGA) BED35_21145 IPR001123 Lysine-type exporter protein (LYSE/YGGA) BED35_21145 IPR004778 Homoserine/Threonine efflux protein BED35_21150 IPR001650 Helicase, C-terminal BED35_21150 IPR002121 HRDC domain BED35_21150 IPR004589 DNA helicase, ATP-dependent, RecQ type BED35_21150 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial BED35_21150 IPR010997 HRDC-like BED35_21150 IPR011545 DEAD/DEAH box helicase domain BED35_21150 IPR014001 Helicase, superfamily 1/2, ATP-binding domain BED35_21150 IPR018982 RQC domain BED35_21150 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_21150 IPR032284 BED35_21150 BED35_21150 IPR036388 BED35_21150 BED35_21155 IPR003187 Phospholipase A1 BED35_21155 IPR036541 BED35_21155 BED35_21160 IPR003736 Phenylacetic acid degradation-related domain BED35_21160 IPR006683 Thioesterase superfamily BED35_21160 IPR029069 HotDog domain BED35_21165 IPR000620 Drug/metabolite transporter BED35_21165 IPR004626 RarD protein BED35_21170 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB BED35_21170 IPR004488 Magnesium/cobalt transport protein CorA BED35_21175 IPR009215 TIM-barrel domain, IGPS-like BED35_21175 IPR013785 Aldolase-type TIM barrel BED35_21175 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain BED35_21180 IPR008322 Uncharacterised protein family UPF0261 BED35_21185 IPR001647 DNA-binding HTH domain, TetR-type BED35_21185 IPR009057 Homeodomain-like BED35_21190 IPR005753 DNA helicase, ATP-dependent, UvrD type BED35_21190 IPR013986 DExx box DNA helicase domain BED35_21190 IPR014017 DNA helicase, UvrD-like, C-terminal BED35_21190 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_21190 IPR034739 BED35_21190 BED35_21195 IPR006439 HAD hydrolase, subfamily IA BED35_21195 IPR023214 HAD-like domain BED35_21195 IPR036412 BED35_21195 BED35_21200 IPR002104 Integrase, catalytic BED35_21200 IPR004107 Integrase, SAM-like, N-terminal BED35_21200 IPR010998 Integrase, Lambda-type, N-terminal BED35_21200 IPR011010 DNA breaking-rejoining enzyme, catalytic core BED35_21200 IPR011931 Tyrosine recombinase XerC BED35_21200 IPR013762 Integrase-like, catalytic core BED35_21200 IPR023009 Tyrosine recombinase XerC/XerD BED35_21205 IPR007435 Protein of unknown function DUF484 BED35_21205 IPR029016 GAF domain-like BED35_21210 IPR001653 Diaminopimelate epimerase, DapF BED35_21210 IPR018510 Diaminopimelate epimerase, active site BED35_21215 IPR032831 BED35_21215 BED35_21220 IPR002908 Frataxin/CyaY BED35_21220 IPR020895 Frataxin conserved site BED35_21220 IPR036524 BED35_21220 BED35_21225 IPR036188 BED35_21225 BED35_21225 IPR038732 BED35_21225 BED35_21230 IPR000274 Adenylate cyclase, class-I BED35_21230 IPR024685 Adenylate cyclase class-I, N-terminal domain BED35_21230 IPR024686 Adenylate cyclase class-I, conserved site BED35_21235 IPR000860 Tetrapyrrole biosynthesis, hydroxymethylbilane synthase BED35_21235 IPR022417 Porphobilinogen deaminase, N-terminal BED35_21235 IPR022418 Porphobilinogen deaminase, C-terminal BED35_21235 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site BED35_21235 IPR036803 BED35_21235 BED35_21240 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase BED35_21240 IPR036108 BED35_21240 BED35_21245 IPR007470 HemX BED35_21250 IPR005254 Heme biosynthesis-associated TPR protein BED35_21250 IPR010817 HemY, N-terminal BED35_21250 IPR011990 Tetratricopeptide-like helical domain BED35_21255 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED35_21255 IPR003346 Transposase, IS116/IS110/IS902 BED35_21285 IPR004629 Glycosyl transferase WecB/TagA/CpsF BED35_21285 IPR023085 UDP-N-acetyl-D-mannosaminuronic acid transferase BED35_21290 IPR010691 Uncharacterised protein family WzyE BED35_21295 IPR009993 4-alpha-L-fucosyltransferase BED35_21300 IPR002797 Polysaccharide biosynthesis protein BED35_21300 IPR032896 BED35_21300 BED35_21305 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase BED35_21305 IPR012749 TDP-4-keto-6-deoxy-D-glucose transaminase BED35_21305 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BED35_21305 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 BED35_21305 IPR015424 Pyridoxal phosphate-dependent transferase BED35_21305 IPR032894 BED35_21305 BED35_21310 IPR000182 GNAT domain BED35_21310 IPR012752 TDP-D-fucosamine acetyltransferase WecD BED35_21310 IPR016181 Acyl-CoA N-acyltransferase BED35_21315 IPR005835 Nucleotidyl transferase BED35_21315 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form BED35_21315 IPR029044 Nucleotide-diphospho-sugar transferases BED35_21320 IPR005888 dTDP-glucose 4,6-dehydratase BED35_21320 IPR016040 NAD(P)-binding domain BED35_21320 IPR036291 BED35_21320 BED35_21325 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal BED35_21325 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like BED35_21325 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation BED35_21325 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal BED35_21325 IPR017476 UDP-glucose/GDP-mannose dehydrogenase BED35_21325 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase BED35_21325 IPR032891 BED35_21325 BED35_21325 IPR036220 BED35_21325 BED35_21325 IPR036291 BED35_21325 BED35_21330 IPR003331 UDP-N-acetylglucosamine 2-epimerase BED35_21330 IPR029767 UDP-N-acetylglucosamine 2-epimerase, WecB-type BED35_21330 IPR032892 BED35_21330 BED35_21335 IPR003856 Lipopolysaccharide biosynthesis BED35_21335 IPR032895 BED35_21335 BED35_21340 IPR000715 Glycosyl transferase, family 4 BED35_21340 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase BED35_21345 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED35_21345 IPR003346 Transposase, IS116/IS110/IS902 BED35_21350 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain BED35_21350 IPR003593 AAA+ ATPase domain BED35_21350 IPR004665 Transcription termination factor Rho BED35_21350 IPR011112 Rho termination factor, N-terminal BED35_21350 IPR011113 Rho termination factor, RNA-binding BED35_21350 IPR011129 Cold shock protein BED35_21350 IPR012340 Nucleic acid-binding, OB-fold BED35_21350 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_21350 IPR036269 BED35_21350 BED35_21355 IPR005746 Thioredoxin BED35_21355 IPR013766 Thioredoxin domain BED35_21355 IPR017937 Thioredoxin, conserved site BED35_21355 IPR036249 BED35_21355 BED35_21360 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site BED35_21360 IPR001650 Helicase, C-terminal BED35_21360 IPR011545 DEAD/DEAH box helicase domain BED35_21360 IPR014001 Helicase, superfamily 1/2, ATP-binding domain BED35_21360 IPR023554 RNA helicase, ATP-dependent, RhlB-type BED35_21360 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_21365 IPR003695 Ppx/GppA phosphatase BED35_21365 IPR022371 Exopolyphosphatase BED35_21365 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase BED35_21365 IPR030673 BED35_21365 BED35_21370 IPR000743 Glycoside hydrolase, family 28 BED35_21370 IPR003961 Fibronectin, type III BED35_21370 IPR011050 Pectin lyase fold/virulence factor BED35_21370 IPR012334 Pectin lyase fold BED35_21370 IPR013783 Immunoglobulin-like fold BED35_21370 IPR036116 BED35_21370 BED35_21375 IPR005752 DNA helicase, ATP-dependent, RepA type BED35_21375 IPR013986 DExx box DNA helicase domain BED35_21375 IPR014017 DNA helicase, UvrD-like, C-terminal BED35_21375 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_21375 IPR034739 BED35_21375 BED35_21385 IPR008966 Adhesion domain BED35_21385 IPR036937 BED35_21385 BED35_21390 IPR009057 Homeodomain-like BED35_21390 IPR038717 BED35_21390 BED35_21395 IPR014942 Protein of unknown function DUF1814 BED35_21410 IPR003812 Fido domain BED35_21410 IPR025758 Fic/DOC N-terminal BED35_21410 IPR026287 Adenosine monophosphate-protein transferase BED35_21410 IPR036597 BED35_21410 BED35_21415 IPR004968 DNA primase/nucleoside triphosphatase, C-terminal BED35_21415 IPR006171 Toprim domain BED35_21415 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal BED35_21415 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal BED35_21415 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_21415 IPR036388 BED35_21415 BED35_21415 IPR036390 BED35_21415 BED35_21420 IPR009241 Addiction module killer protein BED35_21425 IPR009061 DNA binding domain, putative BED35_21425 IPR010260 Bacteriophage P4, Orf88 BED35_21445 IPR002104 Integrase, catalytic BED35_21445 IPR010998 Integrase, Lambda-type, N-terminal BED35_21445 IPR011010 DNA breaking-rejoining enzyme, catalytic core BED35_21445 IPR013762 Integrase-like, catalytic core BED35_21445 IPR025166 Domain of unknown function DUF4102 BED35_21445 IPR038488 BED35_21445 BED35_21450 IPR009057 Homeodomain-like BED35_21450 IPR018060 DNA binding HTH domain, AraC-type BED35_21450 IPR018062 HTH domain AraC-type, conserved site BED35_21450 IPR020449 Transcription regulator HTH, AraC- type BED35_21450 IPR028082 Periplasmic binding protein-like I BED35_21455 IPR001851 ABC transporter, permease BED35_21460 IPR003439 ABC transporter-like BED35_21460 IPR003593 AAA+ ATPase domain BED35_21460 IPR013455 ABC transporter, D-xylose, ATP-binding protein BED35_21460 IPR017871 ABC transporter, conserved site BED35_21460 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_21465 IPR013456 D-xylose ABC transporter, substrate-binding protein BED35_21465 IPR025997 Periplasmic binding protein domain BED35_21465 IPR028082 Periplasmic binding protein-like I BED35_21470 IPR001998 Xylose isomerase BED35_21470 IPR013452 Xylose isomerase, bacterial-type BED35_21470 IPR036237 BED35_21470 BED35_21475 IPR000577 BED35_21475 BED35_21475 IPR006000 Xylulokinase BED35_21475 IPR018483 Carbohydrate kinase, FGGY, conserved site BED35_21475 IPR018484 Carbohydrate kinase, FGGY, N-terminal BED35_21475 IPR018485 Carbohydrate kinase, FGGY, C-terminal BED35_21480 IPR001829 Pili assembly chaperone, bacterial BED35_21480 IPR008962 PapD-like BED35_21480 IPR013783 Immunoglobulin-like fold BED35_21480 IPR016147 PapD, N-terminal, bacterial BED35_21480 IPR016148 Pili assembly chaperone, C-terminal domain BED35_21480 IPR018046 Pili assembly chaperone, conserved site BED35_21480 IPR036316 BED35_21480 BED35_21485 IPR000868 Isochorismatase-like BED35_21485 IPR036380 BED35_21485 BED35_21490 IPR002818 ThiJ/PfpI BED35_21490 IPR009057 Homeodomain-like BED35_21490 IPR018060 DNA binding HTH domain, AraC-type BED35_21490 IPR029062 Class I glutamine amidotransferase-like BED35_21495 IPR002656 Acyltransferase 3 BED35_21495 IPR032905 BED35_21495 BED35_21500 IPR011701 Major facilitator superfamily BED35_21500 IPR036259 BED35_21500 BED35_21505 IPR000795 Elongation factor, GTP-binding domain BED35_21505 IPR004535 Translation elongation factor, selenocysteine-specific BED35_21505 IPR009000 Translation protein, beta-barrel domain BED35_21505 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal BED35_21505 IPR015190 Translation elongation factor SelB, winged helix, type 2 BED35_21505 IPR015191 Translation elongation factor SelB, winged helix, type 3 BED35_21505 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_21505 IPR031157 BED35_21505 BED35_21505 IPR036388 BED35_21505 BED35_21505 IPR036390 BED35_21505 BED35_21510 IPR004534 L-seryl-tRNA selenium transferase BED35_21510 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BED35_21510 IPR015424 Pyridoxal phosphate-dependent transferase BED35_21510 IPR018319 L-seryl-tRNA selenium transferase-like BED35_21510 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain BED35_21515 IPR006452 Formate dehydrogenase accessory protein BED35_21515 IPR024064 FdhE-like BED35_21520 IPR006471 Formate dehydrogenase, gamma subunit BED35_21520 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase BED35_21520 IPR016174 Di-haem cytochrome, transmembrane BED35_21525 IPR006470 Formate dehydrogenase, beta subunit BED35_21525 IPR014603 Formate dehydrogenase, iron-sulphur subunit BED35_21525 IPR015246 Formate dehydrogenase, transmembrane BED35_21525 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BED35_21525 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BED35_21525 IPR038384 BED35_21525 BED35_21530 IPR006443 Formate dehydrogenase, alpha subunit, anaerobic BED35_21530 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site BED35_21530 IPR006656 Molybdopterin oxidoreductase BED35_21530 IPR006657 Molydopterin dinucleotide-binding domain BED35_21530 IPR009010 Aspartate decarboxylase-like domain BED35_21535 IPR006656 Molybdopterin oxidoreductase BED35_21535 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain BED35_21535 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site BED35_21540 IPR003786 Protein FdhD BED35_21540 IPR016193 Cytidine deaminase-like BED35_21545 IPR001189 Manganese/iron superoxide dismutase BED35_21545 IPR019831 Manganese/iron superoxide dismutase, N-terminal BED35_21545 IPR019832 Manganese/iron superoxide dismutase, C-terminal BED35_21545 IPR019833 Manganese/iron superoxide dismutase, binding site BED35_21545 IPR036314 BED35_21545 BED35_21545 IPR036324 BED35_21545 BED35_21550 IPR003660 HAMP linker domain BED35_21550 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BED35_21550 IPR004090 Chemotaxis methyl-accepting receptor BED35_21550 IPR032255 BED35_21550 BED35_21555 IPR005163 3-alpha domain BED35_21555 IPR005302 Molybdenum cofactor sulfurase, C-terminal BED35_21555 IPR011037 Pyruvate kinase-like, insert domain BED35_21560 IPR002716 PIN domain BED35_21560 IPR022907 VapC family BED35_21560 IPR029060 PIN domain-like BED35_21565 IPR007159 AbrB-like domain BED35_21565 IPR037914 BED35_21565 BED35_21570 IPR021230 Protein of unknown function DUF2810 BED35_21575 IPR000524 Transcription regulator HTH, GntR BED35_21575 IPR004839 Aminotransferase, class I/classII BED35_21575 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BED35_21575 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 BED35_21575 IPR015424 Pyridoxal phosphate-dependent transferase BED35_21575 IPR036388 BED35_21575 BED35_21575 IPR036390 BED35_21575 BED35_21580 IPR001123 Lysine-type exporter protein (LYSE/YGGA) BED35_21585 IPR007761 Mannitol repressor BED35_21585 IPR038026 BED35_21585 BED35_21590 IPR000669 Mannitol dehydrogenase BED35_21590 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like BED35_21590 IPR013118 Mannitol dehydrogenase, C-terminal BED35_21590 IPR013131 Mannitol dehydrogenase, N-terminal BED35_21590 IPR013328 Dehydrogenase, multihelical BED35_21590 IPR023027 Mannitol dehydrogenase, conserved site BED35_21590 IPR023028 Mannitol-1-phosphate 5-dehydrogenase BED35_21590 IPR036291 BED35_21590 BED35_21595 IPR002178 PTS EIIA type-2 domain BED35_21595 IPR003352 Phosphotransferase system, EIIC BED35_21595 IPR003501 Phosphotransferase system, EIIB component, type 2/3 BED35_21595 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC BED35_21595 IPR016152 Phosphotransferase/anion transporter BED35_21595 IPR036095 BED35_21595 BED35_21600 IPR021413 Protein of unknown function DUF3053 BED35_21605 IPR008909 DALR anticodon binding BED35_21605 IPR015944 Glycine-tRNA ligase, beta subunit BED35_21610 IPR002310 Glycine-tRNA ligase, alpha subunit BED35_21615 IPR004597 DNA-3-methyladenine glycosylase I BED35_21615 IPR005019 Methyladenine glycosylase BED35_21615 IPR011257 DNA glycosylase BED35_21620 IPR000182 GNAT domain BED35_21620 IPR016181 Acyl-CoA N-acyltransferase BED35_21630 IPR011024 Gamma-crystallin-related BED35_21630 IPR015059 Calcium-dependent cell adhesion molecule, N-terminal BED35_21640 IPR036388 BED35_21640 BED35_21640 IPR036390 BED35_21640 BED35_21645 IPR011701 Major facilitator superfamily BED35_21645 IPR036259 BED35_21645 BED35_21650 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BED35_21650 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain BED35_21650 IPR023756 Glyoxylate/hydroxypyruvate reductase B BED35_21650 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 BED35_21650 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site BED35_21650 IPR036291 BED35_21650 BED35_21655 IPR006047 Glycosyl hydrolase, family 13, catalytic domain BED35_21655 IPR014635 Alpha-amylase, MalS type BED35_21655 IPR017853 Glycoside hydrolase, superfamily BED35_21660 IPR004839 Aminotransferase, class I/classII BED35_21660 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BED35_21660 IPR015424 Pyridoxal phosphate-dependent transferase BED35_21665 IPR006037 Regulator of K+ conductance, C-terminal BED35_21665 IPR006512 YidE/YbjL duplication BED35_21665 IPR023018 Transport protein YidE, putative BED35_21665 IPR036721 BED35_21665 BED35_21670 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED35_21670 IPR003346 Transposase, IS116/IS110/IS902 BED35_21675 IPR011701 Major facilitator superfamily BED35_21675 IPR036259 BED35_21675 BED35_21690 IPR001433 Oxidoreductase FAD/NAD(P)-binding BED35_21690 IPR008333 Oxidoreductase, FAD-binding domain BED35_21690 IPR017938 Riboflavin synthase-like beta-barrel BED35_21690 IPR039261 BED35_21690 BED35_21695 IPR008523 Lactobacillus phage LBR48, DUF805 BED35_21700 IPR009918 Protein of unknown function DUF1454 BED35_21705 IPR000652 Triosephosphate isomerase BED35_21705 IPR013785 Aldolase-type TIM barrel BED35_21705 IPR020861 Triosephosphate isomerase, active site BED35_21705 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic BED35_21705 IPR035990 BED35_21705 BED35_21710 IPR028908 Tox-PL domain BED35_21715 IPR005669 Thiosulphate/Sulfate-binding protein BED35_21715 IPR034408 BED35_21715 BED35_21720 IPR000023 Phosphofructokinase domain BED35_21720 IPR012003 ATP-dependent phosphofructokinase, prokaryotic-type BED35_21720 IPR012828 6-phosphofructokinase BED35_21720 IPR015912 Phosphofructokinase, conserved site BED35_21720 IPR022953 Phosphofructokinase BED35_21720 IPR035966 BED35_21720 BED35_21725 IPR002524 Cation efflux protein BED35_21725 IPR023783 Cation efflux pump FieF BED35_21725 IPR027469 Cation efflux protein transmembrane domain BED35_21725 IPR027470 Cation efflux protein cytoplasmic domain BED35_21725 IPR036837 BED35_21725 BED35_21730 IPR012899 LTXXQ motif family protein BED35_21735 IPR001789 Signal transduction response regulator, receiver domain BED35_21735 IPR001867 Signal transduction response regulator, C-terminal BED35_21735 IPR011006 CheY-like superfamily BED35_21735 IPR036388 BED35_21735 BED35_21740 IPR003594 Histidine kinase-like ATPase, C-terminal domain BED35_21740 IPR003660 HAMP linker domain BED35_21740 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain BED35_21740 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BED35_21740 IPR032404 BED35_21740 BED35_21740 IPR036097 BED35_21740 BED35_21740 IPR036890 BED35_21740 BED35_21740 IPR038515 BED35_21740 BED35_21745 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site BED35_21745 IPR004026 Ada DNA repair, metal-binding BED35_21745 IPR009057 Homeodomain-like BED35_21745 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding BED35_21745 IPR016221 Bifunctional regulatory protein Ada BED35_21745 IPR018060 DNA binding HTH domain, AraC-type BED35_21745 IPR035451 BED35_21745 BED35_21745 IPR036217 BED35_21745 BED35_21745 IPR036388 BED35_21745 BED35_21745 IPR036631 BED35_21745 BED35_21750 IPR001537 tRNA/rRNA methyltransferase, SpoU type BED35_21750 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase BED35_21750 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BED35_21750 IPR029028 Alpha/beta knot methyltransferases BED35_21755 IPR001451 Bacterial transferase hexapeptide repeat BED35_21755 IPR005881 Serine O-acetyltransferase BED35_21755 IPR010493 Serine acetyltransferase, N-terminal BED35_21755 IPR011004 Trimeric LpxA-like BED35_21755 IPR018357 Hexapeptide transferase, conserved site BED35_21760 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal BED35_21760 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent BED35_21760 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like BED35_21760 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal BED35_21760 IPR013328 Dehydrogenase, multihelical BED35_21760 IPR036291 BED35_21760 BED35_21765 IPR003708 Bacterial protein export chaperone SecB BED35_21765 IPR035958 BED35_21765 BED35_21770 IPR002109 Glutaredoxin BED35_21770 IPR011767 Glutaredoxin active site BED35_21770 IPR011900 Glutaredoxin, GrxC BED35_21770 IPR014025 Glutaredoxin subgroup BED35_21770 IPR036249 BED35_21770 BED35_21775 IPR001763 Rhodanese-like domain BED35_21775 IPR036873 BED35_21775 BED35_21780 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent BED35_21780 IPR006124 Metalloenzyme BED35_21780 IPR011258 BPG-independent PGAM, N-terminal BED35_21780 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha BED35_21780 IPR017850 Alkaline-phosphatase-like, core domain BED35_21780 IPR036646 BED35_21780 BED35_21785 IPR011055 Duplicated hybrid motif BED35_21785 IPR016047 Peptidase M23 BED35_21790 IPR006837 Protein of unknown function DUF610, YibQ BED35_21790 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel BED35_21805 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site BED35_21805 IPR004627 L-threonine 3-dehydrogenase BED35_21805 IPR011032 GroES (chaperonin 10)-like BED35_21805 IPR013149 Alcohol dehydrogenase, C-terminal BED35_21805 IPR013154 Alcohol dehydrogenase GroES-like BED35_21805 IPR020843 Polyketide synthase, enoylreductase BED35_21805 IPR036291 BED35_21805 BED35_21810 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site BED35_21810 IPR004839 Aminotransferase, class I/classII BED35_21810 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase BED35_21810 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BED35_21810 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 BED35_21810 IPR015424 Pyridoxal phosphate-dependent transferase BED35_21815 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain BED35_21815 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase BED35_21815 IPR036291 BED35_21815 BED35_21820 IPR002201 Glycosyl transferase, family 9 BED35_21820 IPR011910 Lipopolysaccharide heptosyltransferase II BED35_21825 IPR002201 Glycosyl transferase, family 9 BED35_21825 IPR011908 Lipopolysaccharide heptosyltransferase I BED35_21830 IPR001296 Glycosyl transferase, family 1 BED35_21830 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal BED35_21830 IPR038107 BED35_21830 BED35_21835 IPR001173 Glycosyltransferase 2-like BED35_21835 IPR029044 Nucleotide-diphospho-sugar transferases BED35_21840 IPR001980 Coenzyme A biosynthesis protein BED35_21840 IPR004821 Cytidyltransferase-like domain BED35_21840 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED35_21845 IPR010663 Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase BED35_21845 IPR010979 Ribosomal protein S13-like, H2TH BED35_21845 IPR012319 DNA glycosylase/AP lyase, catalytic domain BED35_21845 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding BED35_21845 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site BED35_21845 IPR020629 Formamidopyrimidine-DNA glycosylase BED35_21845 IPR035937 BED35_21845 BED35_21850 IPR001705 Ribosomal protein L33 BED35_21850 IPR011332 Zinc-binding ribosomal protein BED35_21850 IPR018264 Ribosomal protein L33, conserved site BED35_21850 IPR038584 BED35_21850 BED35_21855 IPR001383 Ribosomal protein L28 BED35_21855 IPR026569 Ribosomal protein L28/L24 BED35_21855 IPR034704 BED35_21855 BED35_21855 IPR037147 BED35_21855 BED35_21860 IPR001405 RadC protein BED35_21860 IPR010994 RuvA domain 2-like BED35_21860 IPR020891 Uncharacterised protein family UPF0758, conserved site BED35_21860 IPR022820 Uncharacterised protein family UPF0758, YicR subfamily BED35_21860 IPR025657 RadC-like JAB domain BED35_21865 IPR003382 Flavoprotein BED35_21865 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC BED35_21865 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal BED35_21865 IPR035929 BED35_21865 BED35_21865 IPR036551 BED35_21865 BED35_21870 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase BED35_21870 IPR029054 dUTPase-like BED35_21870 IPR036157 BED35_21870 BED35_21875 IPR001647 DNA-binding HTH domain, TetR-type BED35_21875 IPR009057 Homeodomain-like BED35_21875 IPR023769 Nucleoid occlusion factor SlmA BED35_21875 IPR023772 DNA-binding HTH domain, TetR-type, conserved site BED35_21875 IPR036271 BED35_21875 BED35_21880 IPR000836 Phosphoribosyltransferase domain BED35_21880 IPR004467 Orotate phosphoribosyl transferase domain BED35_21880 IPR023031 Orotate phosphoribosyltransferase BED35_21880 IPR029057 Phosphoribosyltransferase-like BED35_21885 IPR001247 Exoribonuclease, phosphorolytic domain 1 BED35_21885 IPR002381 Ribonuclease phosphorolytic, bacterial-type BED35_21885 IPR015847 Exoribonuclease, phosphorolytic domain 2 BED35_21885 IPR018336 Ribonuclease PH, conserved site BED35_21885 IPR020568 Ribosomal protein S5 domain 2-type fold BED35_21885 IPR027408 PNPase/RNase PH domain BED35_21885 IPR036345 BED35_21885 BED35_21890 IPR005229 Conserved hypothetical protein CHP00255 BED35_21890 IPR013527 YicC-like, N-terminal BED35_21890 IPR013551 Domain of unknown function DUF1732 BED35_21895 IPR002104 Integrase, catalytic BED35_21895 IPR010998 Integrase, Lambda-type, N-terminal BED35_21895 IPR011010 DNA breaking-rejoining enzyme, catalytic core BED35_21895 IPR013762 Integrase-like, catalytic core BED35_21895 IPR025166 Domain of unknown function DUF4102 BED35_21895 IPR038488 BED35_21895 BED35_21905 IPR009061 DNA binding domain, putative BED35_21905 IPR010260 Bacteriophage P4, Orf88 BED35_21915 IPR013557 AntA/AntB antirepressor BED35_21935 IPR025317 Protein of unknown function DUF4222 BED35_21945 IPR006171 Toprim domain BED35_21945 IPR009270 Domain of unknown function DUF927 BED35_21945 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal BED35_21960 IPR013046 Bacteriophage Mu/P2, baseplate assembly BED35_21960 IPR037026 BED35_21960 BED35_21980 IPR007421 ATPase, AAA-4 BED35_21980 IPR038461 BED35_21980 BED35_21980 IPR038475 BED35_21980 BED35_21985 IPR001279 Beta-lactamase-like BED35_21985 IPR036866 BED35_21985 BED35_21995 IPR000014 PAS domain BED35_21995 IPR000160 GGDEF domain BED35_21995 IPR001633 EAL domain BED35_21995 IPR029787 Nucleotide cyclase BED35_21995 IPR035919 BED35_21995 BED35_21995 IPR035965 BED35_21995 BED35_22000 IPR001753 Crotonase superfamily BED35_22000 IPR029045 ClpP/crotonase-like domain BED35_22005 IPR002668 Concentrative nucleoside transporter N-terminal domain BED35_22005 IPR011657 Concentrative nucleoside transporter C-terminal domain BED35_22010 IPR009057 Homeodomain-like BED35_22010 IPR038717 BED35_22010 BED35_22020 IPR005115 Uncharacterised domain UPF0126 BED35_22030 IPR008145 Guanylate kinase/L-type calcium channel beta subunit BED35_22030 IPR017665 Guanylate kinase BED35_22030 IPR020590 Guanylate kinase, conserved site BED35_22030 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_22035 IPR003716 DNA-directed RNA polymerase, omega subunit BED35_22035 IPR006110 RNA polymerase, subunit omega/K/RPB6 BED35_22035 IPR012293 RNA polymerase subunit, RPB6/omega BED35_22035 IPR036161 BED35_22035 BED35_22040 IPR002912 ACT domain BED35_22040 IPR003607 HD/PDEase domain BED35_22040 IPR004095 TGS BED35_22040 IPR004811 RelA/SpoT family BED35_22040 IPR007685 RelA/SpoT BED35_22040 IPR012675 Beta-grasp domain BED35_22040 IPR012676 TGS-like BED35_22045 IPR001537 tRNA/rRNA methyltransferase, SpoU type BED35_22045 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal BED35_22045 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BED35_22045 IPR029028 Alpha/beta knot methyltransferases BED35_22045 IPR033671 BED35_22045 BED35_22050 IPR001650 Helicase, C-terminal BED35_22050 IPR004609 ATP-dependent DNA helicase RecG BED35_22050 IPR011545 DEAD/DEAH box helicase domain BED35_22050 IPR012340 Nucleic acid-binding, OB-fold BED35_22050 IPR014001 Helicase, superfamily 1/2, ATP-binding domain BED35_22050 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_22050 IPR033454 BED35_22050 BED35_22055 IPR004445 Sodium/glutamate symporter BED35_22060 IPR006042 Xanthine/uracil permease BED35_22060 IPR006043 Xanthine/uracil/vitamin C permease BED35_22060 IPR017588 Xanthine permease BED35_22070 IPR000792 Transcription regulator LuxR, C-terminal BED35_22070 IPR013656 PAS fold-4 BED35_22070 IPR016032 Signal transduction response regulator, C-terminal effector BED35_22070 IPR035965 BED35_22070 BED35_22070 IPR036388 BED35_22070 BED35_22075 IPR000792 Transcription regulator LuxR, C-terminal BED35_22075 IPR013656 PAS fold-4 BED35_22075 IPR016032 Signal transduction response regulator, C-terminal effector BED35_22075 IPR036388 BED35_22075 BED35_22080 IPR010982 Lambda repressor-like, DNA-binding domain BED35_22080 IPR038722 BED35_22080 BED35_22085 IPR000182 GNAT domain BED35_22085 IPR012660 Thioesterase, putative BED35_22085 IPR016181 Acyl-CoA N-acyltransferase BED35_22085 IPR029069 HotDog domain BED35_22090 IPR003732 D-tyrosyl-tRNA(Tyr) deacylase BED35_22090 IPR023509 D-Tyr tRNAtyr deacylase-like domain BED35_22095 IPR017039 Virulence factor BrkB BED35_22095 IPR023679 Uncharacterised protein family UPF0761, bacterial BED35_22100 IPR006439 HAD hydrolase, subfamily IA BED35_22100 IPR023198 Phosphoglycolate phosphatase, domain 2 BED35_22100 IPR023214 HAD-like domain BED35_22100 IPR036412 BED35_22100 BED35_22105 IPR000640 Translation elongation factor EFG, V domain BED35_22105 IPR000795 Elongation factor, GTP-binding domain BED35_22105 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 BED35_22105 IPR005225 Small GTP-binding protein domain BED35_22105 IPR006298 GTP-binding protein TypA BED35_22105 IPR009000 Translation protein, beta-barrel domain BED35_22105 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_22105 IPR031157 BED35_22105 BED35_22105 IPR035647 BED35_22105 BED35_22110 IPR001637 Glutamine synthetase class-I, adenylation site BED35_22110 IPR004809 Glutamine synthetase type I BED35_22110 IPR008146 Glutamine synthetase, catalytic domain BED35_22110 IPR008147 Glutamine synthetase, beta-Grasp BED35_22110 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain BED35_22110 IPR027302 Glutamine synthetase, N-terminal conserved site BED35_22110 IPR027303 Glutamine synthetase, glycine-rich site BED35_22110 IPR036651 BED35_22110 BED35_22120 IPR000014 PAS domain BED35_22120 IPR003594 Histidine kinase-like ATPase, C-terminal domain BED35_22120 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain BED35_22120 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BED35_22120 IPR013767 PAS fold BED35_22120 IPR035965 BED35_22120 BED35_22120 IPR036097 BED35_22120 BED35_22120 IPR036890 BED35_22120 BED35_22125 IPR001789 Signal transduction response regulator, receiver domain BED35_22125 IPR002078 RNA polymerase sigma factor 54 interaction domain BED35_22125 IPR002197 DNA binding HTH domain, Fis-type BED35_22125 IPR003593 AAA+ ATPase domain BED35_22125 IPR009057 Homeodomain-like BED35_22125 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) BED35_22125 IPR011006 CheY-like superfamily BED35_22125 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BED35_22125 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BED35_22125 IPR025944 Sigma-54 interaction domain, conserved site BED35_22125 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_22130 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN BED35_22130 IPR006638 Elongator protein 3/MiaB/NifB BED35_22130 IPR007197 Radical SAM BED35_22130 IPR010723 HemN, C-terminal domain BED35_22130 IPR023404 Radical SAM, alpha/beta horseshoe BED35_22135 IPR007336 Der GTPase activator BED35_22140 IPR006073 GTP binding domain BED35_22140 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC BED35_22140 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_22145 IPR001098 DNA-directed DNA polymerase, family A, palm domain BED35_22145 IPR002298 DNA polymerase A BED35_22145 IPR002421 5'-3' exonuclease, N-terminal BED35_22145 IPR002562 3'-5' exonuclease domain BED35_22145 IPR008918 Helix-hairpin-helix motif, class 2 BED35_22145 IPR012337 Ribonuclease H-like domain BED35_22145 IPR018320 DNA polymerase 1 BED35_22145 IPR019760 DNA-directed DNA polymerase, family A, conserved site BED35_22145 IPR020045 5'-3' exonuclease, C-terminal domain BED35_22145 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal BED35_22145 IPR029060 PIN domain-like BED35_22145 IPR036279 BED35_22145 BED35_22145 IPR036397 BED35_22145 BED35_22150 IPR001853 DSBA-like thioredoxin domain BED35_22150 IPR017937 Thioredoxin, conserved site BED35_22150 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL BED35_22150 IPR036249 BED35_22150 BED35_22155 IPR002575 Aminoglycoside phosphotransferase BED35_22155 IPR011009 Protein kinase-like domain BED35_22155 IPR032882 BED35_22155 BED35_22160 IPR009383 Protein of unknown function DUF1040 BED35_22160 IPR038134 BED35_22160 BED35_22165 IPR013482 Molybdenum cofactor guanylyltransferase BED35_22165 IPR025877 MobA-like NTP transferase domain BED35_22165 IPR029044 Nucleotide-diphospho-sugar transferases BED35_22170 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain BED35_22170 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_22175 IPR001584 Integrase, catalytic core BED35_22175 IPR012337 Ribonuclease H-like domain BED35_22175 IPR036397 BED35_22175 BED35_22180 IPR010921 Trp repressor/replication initiator BED35_22205 IPR000524 Transcription regulator HTH, GntR BED35_22205 IPR008920 Transcription regulator FadR/GntR, C-terminal BED35_22205 IPR011711 GntR, C-terminal BED35_22205 IPR036388 BED35_22205 BED35_22205 IPR036390 BED35_22205 BED35_22215 IPR000843 Transcription regulator HTH, LacI BED35_22215 IPR010982 Lambda repressor-like, DNA-binding domain BED35_22215 IPR028082 Periplasmic binding protein-like I BED35_22220 IPR002139 Ribokinase BED35_22220 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site BED35_22220 IPR011611 Carbohydrate kinase PfkB BED35_22220 IPR011877 Ribokinase, bacterial BED35_22220 IPR029056 Ribokinase-like BED35_22225 IPR025997 Periplasmic binding protein domain BED35_22225 IPR028082 Periplasmic binding protein-like I BED35_22230 IPR001851 ABC transporter, permease BED35_22235 IPR003439 ABC transporter-like BED35_22235 IPR003593 AAA+ ATPase domain BED35_22235 IPR017871 ABC transporter, conserved site BED35_22235 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_22240 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU BED35_22240 IPR023064 D-ribose pyranase BED35_22240 IPR023750 RbsD-like domain BED35_22245 IPR003855 K+ potassium transporter BED35_22245 IPR023051 Potassium uptake protein, low affinity, Kup BED35_22250 IPR003593 AAA+ ATPase domain BED35_22250 IPR011704 ATPase, dynein-related, AAA domain BED35_22250 IPR022547 ATPase, RavA, C-terminal BED35_22250 IPR023671 ATPase RavA BED35_22250 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_22255 IPR002035 von Willebrand factor, type A BED35_22255 IPR008912 Uncharacterised protein family CoxE-like BED35_22255 IPR023481 Uncharacterised protein family ViaA BED35_22255 IPR036465 BED35_22255 BED35_22260 IPR009781 Protein of unknown function DUF1345 BED35_22265 IPR004618 Aspartate--ammonia ligase BED35_22270 IPR000485 AsnC-type HTH domain BED35_22270 IPR011008 Dimeric alpha-beta barrel BED35_22270 IPR019885 Transcription regulator HTH, AsnC-type, conserved site BED35_22270 IPR019887 Transcription regulator AsnC-type, C-terminal BED35_22270 IPR019888 Transcription regulator AsnC-type BED35_22270 IPR036388 BED35_22270 BED35_22270 IPR036390 BED35_22270 BED35_22275 IPR001094 Flavodoxin BED35_22275 IPR008254 Flavodoxin/nitric oxide synthase BED35_22275 IPR029039 Flavoprotein-like BED35_22280 IPR002218 Glucose-inhibited division protein A-related BED35_22280 IPR004416 Glucose-inhibited division protein A BED35_22280 IPR020595 Glucose-inhibited division protein A-related, conserved site BED35_22280 IPR026904 GidA associated domain 3 BED35_22280 IPR036188 BED35_22280 BED35_22285 IPR003682 rRNA small subunit methyltransferase G BED35_22285 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BED35_22290 IPR005598 ATP synthase protein I BED35_22295 IPR000568 ATPase, F0 complex, subunit A BED35_22295 IPR023011 ATPase, F0 complex, subunit A, active site BED35_22295 IPR035908 BED35_22295 BED35_22300 IPR000454 ATPase, F0 complex, subunit C BED35_22300 IPR002379 V-ATPase proteolipid subunit C-like domain BED35_22300 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast BED35_22300 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site BED35_22300 IPR035921 BED35_22300 BED35_22300 IPR038662 BED35_22300 BED35_22305 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast BED35_22305 IPR005864 ATPase, F0 complex, subunit B, bacterial BED35_22305 IPR028987 F-type ATP synthase subunit B-like, membrane domain BED35_22310 IPR000711 ATPase, OSCP/delta subunit BED35_22310 IPR020781 ATPase, OSCP/delta subunit, conserved site BED35_22310 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain BED35_22315 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain BED35_22315 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal BED35_22315 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain BED35_22315 IPR005294 ATPase, F1 complex, alpha subunit BED35_22315 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site BED35_22315 IPR023366 ATP synthase subunit alpha-like domain BED35_22315 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_22315 IPR036121 BED35_22315 BED35_22315 IPR038376 BED35_22315 BED35_22320 IPR000131 ATPase, F1 complex, gamma subunit BED35_22320 IPR023632 ATPase, F1 complex, gamma subunit conserved site BED35_22320 IPR035968 BED35_22320 BED35_22325 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain BED35_22325 IPR003593 AAA+ ATPase domain BED35_22325 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain BED35_22325 IPR005722 ATPase, F1 complex, beta subunit BED35_22325 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site BED35_22325 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal BED35_22325 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_22325 IPR036121 BED35_22325 BED35_22330 IPR001469 ATPase, F1 complex, delta/epsilon subunit BED35_22330 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal BED35_22330 IPR020547 ATPase, F1 complex, delta/epsilon subunit, C-terminal domain BED35_22330 IPR036771 BED35_22330 BED35_22330 IPR036794 BED35_22330 BED35_22335 IPR001451 Bacterial transferase hexapeptide repeat BED35_22335 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase BED35_22335 IPR011004 Trimeric LpxA-like BED35_22335 IPR018357 Hexapeptide transferase, conserved site BED35_22335 IPR025877 MobA-like NTP transferase domain BED35_22335 IPR029044 Nucleotide-diphospho-sugar transferases BED35_22340 IPR001347 Sugar isomerase (SIS) BED35_22340 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising BED35_22340 IPR029055 Nucleophile aminohydrolases, N-terminal BED35_22345 IPR005673 ABC transporter, phosphate-binding protein PstS BED35_22345 IPR024370 PBP domain BED35_22350 IPR000515 MetI-like domain BED35_22350 IPR011864 Phosphate ABC transporter, permease protein PstC BED35_22350 IPR035906 BED35_22350 BED35_22355 IPR000515 MetI-like domain BED35_22355 IPR005672 Phosphate transport system permease protein PstA BED35_22355 IPR035906 BED35_22355 BED35_22360 IPR003439 ABC transporter-like BED35_22360 IPR003593 AAA+ ATPase domain BED35_22360 IPR005670 Phosphate transport system permease protein 1 BED35_22360 IPR017871 ABC transporter, conserved site BED35_22360 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_22365 IPR026022 PhoU domain BED35_22365 IPR028366 Phosphate transport system protein PhoU BED35_22365 IPR038078 BED35_22365 BED35_22370 IPR007607 Protein of unknown function DUF583 BED35_22375 IPR001638 Extracellular solute-binding protein, family 3 BED35_22375 IPR018313 Extracellular solute-binding protein, family 3, conserved site BED35_22385 IPR000515 MetI-like domain BED35_22385 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family BED35_22385 IPR035906 BED35_22385 BED35_22390 IPR006439 HAD hydrolase, subfamily IA BED35_22390 IPR023198 Phosphoglycolate phosphatase, domain 2 BED35_22390 IPR023214 HAD-like domain BED35_22390 IPR036412 BED35_22390 BED35_22395 IPR006043 Xanthine/uracil/vitamin C permease BED35_22395 IPR026033 Purine permease PbuG-like BED35_22400 IPR005624 Domain of unknown function DUF336 BED35_22400 IPR038084 BED35_22400 BED35_22405 IPR000792 Transcription regulator LuxR, C-terminal BED35_22405 IPR001789 Signal transduction response regulator, receiver domain BED35_22405 IPR011006 CheY-like superfamily BED35_22405 IPR036388 BED35_22405 BED35_22410 IPR003594 Histidine kinase-like ATPase, C-terminal domain BED35_22410 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain BED35_22410 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BED35_22410 IPR036097 BED35_22410 BED35_22410 IPR036890 BED35_22410 BED35_22415 IPR005025 NADPH-dependent FMN reductase-like BED35_22415 IPR029039 Flavoprotein-like BED35_22420 IPR003660 HAMP linker domain BED35_22420 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BED35_22420 IPR004090 Chemotaxis methyl-accepting receptor BED35_22420 IPR033479 BED35_22420 BED35_22425 IPR000515 MetI-like domain BED35_22425 IPR035906 BED35_22425 BED35_22430 IPR003439 ABC transporter-like BED35_22430 IPR003593 AAA+ ATPase domain BED35_22430 IPR017871 ABC transporter, conserved site BED35_22430 IPR018449 NIL domain BED35_22430 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_22435 IPR004872 Lipoprotein NlpA family BED35_22440 IPR010758 Trans-2-enoyl-CoA reductase BED35_22440 IPR024906 Enoyl reductase FAD binding domain BED35_22440 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative BED35_22445 IPR004520 tRNA modification GTPase MnmE BED35_22445 IPR005225 Small GTP-binding protein domain BED35_22445 IPR006073 GTP binding domain BED35_22445 IPR018948 GTP-binding protein TrmE, N-terminal BED35_22445 IPR025867 tRNA modification GTPase MnmE C-terminal domain BED35_22445 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 BED35_22445 IPR027368 tRNA modification GTPase MnmE domain 2 BED35_22445 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED35_22450 IPR001708 Membrane insertase OXA1/ALB3/YidC BED35_22450 IPR019998 Membrane insertase YidC BED35_22450 IPR028053 Membrane insertase YidC, N-terminal BED35_22450 IPR028055 Membrane insertase YidC/Oxa1, C-terminal BED35_22450 IPR038210 BED35_22450 BED35_22450 IPR038221 BED35_22450 BED35_22455 IPR002696 Putative membrane protein insertion efficiency factor BED35_22460 IPR000100 Ribonuclease P BED35_22460 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BED35_22460 IPR020539 Ribonuclease P, conserved site BED35_22460 IPR020568 Ribosomal protein S5 domain 2-type fold BED35_22465 IPR000271 Ribosomal protein L34 BED35_22465 IPR020939 Ribosomal protein L34, conserved site