BED32_00030 SM00364 Leucine-rich repeats, bacterial type BED32_00080 SM00220 Serine/Threonine protein kinases, catalytic domain BED32_00135 SM00155 Phospholipase D. Active site motifs. BED32_00165 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BED32_00180 SM00857 Resolvase, N terminal domain BED32_00255 SM00470 ParB-like nuclease domain BED32_00295 SM00194 Protein tyrosine phosphatase, catalytic domain BED32_00295 SM00404 Protein tyrosine phosphatase, catalytic domain motif BED32_00365 SM00342 helix_turn_helix, arabinose operon control protein BED32_00460 SM00382 ATPases associated with a variety of cellular activities BED32_00460 SM00760 Bacterial dnaA protein helix-turn-helix domain BED32_00465 SM00480 DNA polymerase III beta subunit BED32_00475 SM00387 Histidine kinase-like ATPases BED32_00475 SM00433 TopoisomeraseII BED32_00555 SM00382 ATPases associated with a variety of cellular activities BED32_00555 SM01086 C-terminal, D2-small domain, of ClpB protein BED32_00570 SM00354 helix_turn _helix lactose operon repressor BED32_00575 SM00487 DEAD-like helicases superfamily BED32_00575 SM00490 helicase superfamily c-terminal domain BED32_00615 SM00859 Semialdehyde dehydrogenase, NAD binding domain BED32_00655 SM00382 ATPases associated with a variety of cellular activities BED32_00760 SM00382 ATPases associated with a variety of cellular activities BED32_00785 SM00382 ATPases associated with a variety of cellular activities BED32_00890 SM00354 helix_turn _helix lactose operon repressor BED32_00925 SM00912 haemagglutination activity domain BED32_00955 SM00387 Histidine kinase-like ATPases BED32_00960 SM00421 helix_turn_helix, Lux Regulon BED32_00960 SM00448 cheY-homologous receiver domain BED32_00995 SM00382 ATPases associated with a variety of cellular activities BED32_01000 SM00382 ATPases associated with a variety of cellular activities BED32_01045 SM00028 Tetratricopeptide repeats BED32_01055 SM00052 Putative diguanylate phosphodiesterase BED32_01095 SM00052 Putative diguanylate phosphodiesterase BED32_01115 SM00869 Autotransporter beta-domain BED32_01145 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BED32_01185 SM00382 ATPases associated with a variety of cellular activities BED32_01215 SM00382 ATPases associated with a variety of cellular activities BED32_01225 SM00954 Region found in RelA / SpoT proteins BED32_01360 SM00354 helix_turn _helix lactose operon repressor BED32_01380 SM00859 Semialdehyde dehydrogenase, NAD binding domain BED32_01405 SM00642 Alpha-amylase domain BED32_01410 SM00642 Alpha-amylase domain BED32_01445 SM00420 helix_turn_helix, Deoxyribose operon repressor BED32_01445 SM01134 BED32_01445 BED32_01455 SM00450 Rhodanese Homology Domain BED32_01465 SM00421 helix_turn_helix, Lux Regulon BED32_01515 SM00899 BED32_01515 BED32_01520 SM00316 Ribosomal protein S1-like RNA-binding domain BED32_01520 SM00732 Likely ribonuclease with RNase H fold. BED32_01550 SM00448 cheY-homologous receiver domain BED32_01550 SM00862 Transcriptional regulatory protein, C terminal BED32_01555 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BED32_01555 SM00387 Histidine kinase-like ATPases BED32_01555 SM00388 His Kinase A (phosphoacceptor) domain BED32_01570 SM00363 S4 RNA-binding domain BED32_01685 SM00354 helix_turn _helix lactose operon repressor BED32_01700 SM00382 ATPases associated with a variety of cellular activities BED32_01720 SM00100 Cyclic nucleotide-monophosphate binding domain BED32_01720 SM00419 helix_turn_helix, cAMP Regulatory protein BED32_01755 SM00062 Bacterial periplasmic substrate-binding proteins BED32_01785 SM00382 ATPases associated with a variety of cellular activities BED32_01850 SM00838 Elongation factor G C-terminus BED32_01850 SM00889 Elongation factor G, domain IV BED32_01870 SM01403 BED32_01870 BED32_01890 SM01382 BED32_01890 BED32_01890 SM01383 BED32_01890 BED32_01905 SM00322 K homology RNA-binding domain BED32_01925 SM01374 BED32_01925 BED32_01930 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BED32_01995 SM00363 S4 RNA-binding domain BED32_01995 SM01390 BED32_01995 BED32_02000 SM00662 RNA polymerases D BED32_02015 SM00422 helix_turn_helix, mercury resistance BED32_02135 SM00346 helix_turn_helix isocitrate lyase regulation BED32_02140 SM01018 B12 binding domain BED32_02145 SM00912 haemagglutination activity domain BED32_02195 SM00382 ATPases associated with a variety of cellular activities BED32_02225 SM00563 Phosphate acyltransferases BED32_02270 SM00829 Enoylreductase BED32_02275 SM00382 ATPases associated with a variety of cellular activities BED32_02310 SM00530 Helix-turn-helix XRE-family like proteins BED32_02345 SM00382 ATPases associated with a variety of cellular activities BED32_02360 SM00062 Bacterial periplasmic substrate-binding proteins BED32_02385 SM00357 Cold shock protein domain BED32_02390 SM00357 Cold shock protein domain BED32_02430 SM00878 Biotin carboxylase C-terminal domain BED32_02455 SM00829 Enoylreductase BED32_02460 SM00052 Putative diguanylate phosphodiesterase BED32_02460 SM00267 diguanylate cyclase BED32_02485 SM00316 Ribosomal protein S1-like RNA-binding domain BED32_02840 SM00530 Helix-turn-helix XRE-family like proteins BED32_02855 SM00354 helix_turn _helix lactose operon repressor BED32_02865 SM00642 Alpha-amylase domain BED32_02875 SM00460 Transglutaminase/protease-like homologues BED32_02930 SM00382 ATPases associated with a variety of cellular activities BED32_02960 SM00382 ATPases associated with a variety of cellular activities BED32_02995 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BED32_03000 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BED32_03055 SM00729 Elongator protein 3, MiaB family, Radical SAM BED32_03060 SM00073 Histidine Phosphotransfer domain BED32_03060 SM00091 PAS domain BED32_03060 SM00387 Histidine kinase-like ATPases BED32_03060 SM00388 His Kinase A (phosphoacceptor) domain BED32_03060 SM00448 cheY-homologous receiver domain BED32_03075 SM00749 bacterial OsmY and nodulation domain BED32_03115 SM00857 Resolvase, N terminal domain BED32_03135 SM00530 Helix-turn-helix XRE-family like proteins BED32_03175 SM00829 Enoylreductase BED32_03235 SM00345 helix_turn_helix gluconate operon transcriptional repressor BED32_03235 SM00895 BED32_03235 BED32_03255 SM00858 BED32_03255 BED32_03290 SM00869 Autotransporter beta-domain BED32_03300 SM00869 Autotransporter beta-domain BED32_03405 SM00400 zinc finger BED32_03405 SM00493 BED32_03405 BED32_03405 SM00766 DNA primase DnaG DnaB-binding BED32_03420 SM01207 BED32_03420 BED32_03425 SM00905 Dihydroneopterin aldolase BED32_03435 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BED32_03440 SM00287 Bacterial SH3 domain homologues BED32_03445 SM01118 BED32_03445 BED32_03520 SM00387 Histidine kinase-like ATPases BED32_03520 SM00433 TopoisomeraseII BED32_03540 SM00434 DNA Topoisomerase IV BED32_03545 SM00563 Phosphate acyltransferases BED32_03555 SM00729 Elongator protein 3, MiaB family, Radical SAM BED32_03570 SM00342 helix_turn_helix, arabinose operon control protein BED32_03695 SM00342 helix_turn_helix, arabinose operon control protein BED32_03720 SM00382 ATPases associated with a variety of cellular activities BED32_03755 SM00382 ATPases associated with a variety of cellular activities BED32_03785 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BED32_03830 SM00382 ATPases associated with a variety of cellular activities BED32_03855 SM00382 ATPases associated with a variety of cellular activities BED32_03875 SM00858 BED32_03875 BED32_04080 SM00052 Putative diguanylate phosphodiesterase BED32_04080 SM00091 PAS domain BED32_04080 SM00267 diguanylate cyclase BED32_04125 SM00354 helix_turn _helix lactose operon repressor BED32_04145 SM00345 helix_turn_helix gluconate operon transcriptional repressor BED32_04300 SM00478 endonuclease III BED32_04300 SM00525 BED32_04300 BED32_04325 SM00729 Elongator protein 3, MiaB family, Radical SAM BED32_04335 SM01152 BED32_04335 BED32_04370 SM00732 Likely ribonuclease with RNase H fold. BED32_04395 SM00731 SprT homologues. BED32_04400 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BED32_04440 SM00861 Transketolase, pyrimidine binding domain BED32_04445 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BED32_04460 SM00194 Protein tyrosine phosphatase, catalytic domain BED32_04460 SM00404 Protein tyrosine phosphatase, catalytic domain motif BED32_04640 SM00257 Lysin motif BED32_04650 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BED32_04650 SM00534 ATPase domain of DNA mismatch repair MUTS family BED32_04720 SM00382 ATPases associated with a variety of cellular activities BED32_04730 SM00382 ATPases associated with a variety of cellular activities BED32_04740 SM00825 Beta-ketoacyl synthase BED32_04755 SM00822 BED32_04755 BED32_04765 SM01235 BED32_04765 BED32_04775 SM00838 Elongation factor G C-terminus BED32_04775 SM00889 Elongation factor G, domain IV BED32_04780 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BED32_04820 SM01012 BED32_04820 BED32_04835 SM00382 ATPases associated with a variety of cellular activities BED32_04865 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BED32_04900 SM00382 ATPases associated with a variety of cellular activities BED32_04910 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BED32_04955 SM01091 Transporter associated domain BED32_04975 SM00382 ATPases associated with a variety of cellular activities BED32_04975 SM00962 SRP54-type protein, GTPase domain BED32_04975 SM00963 SRP54-type protein, helical bundle domain BED32_05010 SM00448 cheY-homologous receiver domain BED32_05010 SM00850 LytTr DNA-binding domain BED32_05020 SM00830 Chorismate mutase type II BED32_05025 SM00830 Chorismate mutase type II BED32_05035 SM00382 ATPases associated with a variety of cellular activities BED32_05035 SM01086 C-terminal, D2-small domain, of ClpB protein BED32_05045 SM00363 S4 RNA-binding domain BED32_05105 SM00155 Phospholipase D. Active site motifs. BED32_05110 SM00881 CoA binding domain BED32_05115 SM01144 BED32_05115 BED32_05125 SM00967 RNA 2'-O ribose methyltransferase substrate binding BED32_05145 SM00347 helix_turn_helix multiple antibiotic resistance protein BED32_05190 SM00062 Bacterial periplasmic substrate-binding proteins BED32_05205 SM00382 ATPases associated with a variety of cellular activities BED32_05340 SM00530 Helix-turn-helix XRE-family like proteins BED32_05365 SM00382 ATPases associated with a variety of cellular activities BED32_05600 SM01007 Class II Aldolase and Adducin N-terminal domain BED32_05630 SM00710 Parallel beta-helix repeats BED32_05670 SM00900 BED32_05670 BED32_05755 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BED32_05765 SM00345 helix_turn_helix gluconate operon transcriptional repressor BED32_05765 SM00866 BED32_05765 BED32_05785 SM01068 Putative carbohydrate binding domain BED32_05855 SM00448 cheY-homologous receiver domain BED32_05855 SM00862 Transcriptional regulatory protein, C terminal BED32_05860 SM00091 PAS domain BED32_05860 SM00387 Histidine kinase-like ATPases BED32_05860 SM00388 His Kinase A (phosphoacceptor) domain BED32_05880 SM00642 Alpha-amylase domain BED32_05925 SM01323 BED32_05925 BED32_05985 SM00861 Transketolase, pyrimidine binding domain BED32_06000 SM00981 BED32_06000 BED32_06085 SM00382 ATPases associated with a variety of cellular activities BED32_06085 SM00994 ClpX C4-type zinc finger BED32_06085 SM01086 C-terminal, D2-small domain, of ClpB protein BED32_06090 SM00382 ATPases associated with a variety of cellular activities BED32_06090 SM00464 Found in ATP-dependent protease La (LON) BED32_06095 SM00411 bacterial (prokaryotic) histone like domain BED32_06105 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BED32_06135 SM00344 helix_turn_helix ASNC type BED32_06140 SM00382 ATPases associated with a variety of cellular activities BED32_06145 SM00382 ATPases associated with a variety of cellular activities BED32_06150 SM00938 Nitrogen regulatory protein P-II BED32_06195 SM00382 ATPases associated with a variety of cellular activities BED32_06290 SM00382 ATPases associated with a variety of cellular activities BED32_06300 SM00493 BED32_06300 BED32_06305 SM00387 Histidine kinase-like ATPases BED32_06405 SM00422 helix_turn_helix, mercury resistance BED32_06415 SM00244 prohibitin homologues BED32_06425 SM00822 BED32_06425 BED32_06435 SM00382 ATPases associated with a variety of cellular activities BED32_06450 SM01001 AIR carboxylase BED32_06465 SM00840 BED32_06465 BED32_06600 SM00382 ATPases associated with a variety of cellular activities BED32_06925 SM00530 Helix-turn-helix XRE-family like proteins BED32_06950 SM00382 ATPases associated with a variety of cellular activities BED32_06990 SM00507 HNH nucleases BED32_07050 SM01252 BED32_07050 BED32_07140 SM01040 BRO family, N-terminal domain BED32_07145 SM01252 BED32_07145 BED32_07295 SM00448 cheY-homologous receiver domain BED32_07295 SM00862 Transcriptional regulatory protein, C terminal BED32_07315 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. BED32_07330 SM00382 ATPases associated with a variety of cellular activities BED32_07365 SM00357 Cold shock protein domain BED32_07375 SM00267 diguanylate cyclase BED32_07385 SM00729 Elongator protein 3, MiaB family, Radical SAM BED32_07400 SM00936 Penicillin-binding protein 5, C-terminal domain BED32_07455 SM00382 ATPases associated with a variety of cellular activities BED32_07470 SM00062 Bacterial periplasmic substrate-binding proteins BED32_07485 SM00116 Domain in cystathionine beta-synthase and other proteins. BED32_07485 SM01091 Transporter associated domain BED32_07500 SM00729 Elongator protein 3, MiaB family, Radical SAM BED32_07585 SM01081 Putative carbohydrate binding domain BED32_07600 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BED32_07635 SM00448 cheY-homologous receiver domain BED32_07635 SM00862 Transcriptional regulatory protein, C terminal BED32_07640 SM00387 Histidine kinase-like ATPases BED32_07640 SM00388 His Kinase A (phosphoacceptor) domain BED32_07705 SM00796 Allophanate hydrolase subunit 1 BED32_07710 SM00797 Allophanate hydrolase subunit 2 BED32_07760 SM00861 Transketolase, pyrimidine binding domain BED32_07775 SM00881 CoA binding domain BED32_07880 SM00855 Phosphoglycerate mutase family BED32_07885 SM00477 DNA/RNA non-specific endonuclease BED32_07885 SM00892 DNA/RNA non-specific endonuclease BED32_07930 SM00382 ATPases associated with a variety of cellular activities BED32_07955 SM00382 ATPases associated with a variety of cellular activities BED32_07975 SM00729 Elongator protein 3, MiaB family, Radical SAM BED32_07975 SM00876 Biotin and Thiamin Synthesis associated domain BED32_07995 SM00382 ATPases associated with a variety of cellular activities BED32_08000 SM00487 DEAD-like helicases superfamily BED32_08000 SM00490 helicase superfamily c-terminal domain BED32_08015 SM00729 Elongator protein 3, MiaB family, Radical SAM BED32_08050 SM00382 ATPases associated with a variety of cellular activities BED32_08065 SM00487 DEAD-like helicases superfamily BED32_08065 SM00490 helicase superfamily c-terminal domain BED32_08080 SM00116 Domain in cystathionine beta-synthase and other proteins. BED32_08095 SM01118 BED32_08095 BED32_08100 SM00507 HNH nucleases BED32_08115 SM00382 ATPases associated with a variety of cellular activities BED32_08160 SM00382 ATPases associated with a variety of cellular activities BED32_08165 SM00450 Rhodanese Homology Domain BED32_08190 SM00382 ATPases associated with a variety of cellular activities BED32_08235 SM00487 DEAD-like helicases superfamily BED32_08235 SM00488 BED32_08235 BED32_08235 SM00491 BED32_08235 BED32_08260 SM00903 Flavin reductase like domain BED32_08270 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BED32_08270 SM00091 PAS domain BED32_08270 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BED32_08275 SM00382 ATPases associated with a variety of cellular activities BED32_08285 SM00062 Bacterial periplasmic substrate-binding proteins BED32_08285 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BED32_08315 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. BED32_08355 SM00382 ATPases associated with a variety of cellular activities BED32_08370 SM00852 Probable molybdopterin binding domain BED32_08385 SM00382 ATPases associated with a variety of cellular activities BED32_08410 SM00829 Enoylreductase BED32_08435 SM00354 helix_turn _helix lactose operon repressor BED32_08445 SM00382 ATPases associated with a variety of cellular activities BED32_08455 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BED32_08455 SM00382 ATPases associated with a variety of cellular activities BED32_08540 SM00919 Malic enzyme, NAD binding domain BED32_08540 SM01274 BED32_08540 BED32_08615 SM01091 Transporter associated domain BED32_08645 SM00382 ATPases associated with a variety of cellular activities BED32_08710 SM01350 BED32_08710 BED32_08765 SM00382 ATPases associated with a variety of cellular activities BED32_08815 SM00382 ATPases associated with a variety of cellular activities BED32_08850 SM00877 BED32_08850 BED32_08855 SM00877 BED32_08855 BED32_08895 SM00877 BED32_08895 BED32_08900 SM00877 BED32_08900 BED32_08930 SM00877 BED32_08930 BED32_08935 SM00877 BED32_08935 BED32_08945 SM00342 helix_turn_helix, arabinose operon control protein BED32_09025 SM00382 ATPases associated with a variety of cellular activities BED32_09045 SM00855 Phosphoglycerate mutase family BED32_09065 SM00421 helix_turn_helix, Lux Regulon BED32_09145 SM00420 helix_turn_helix, Deoxyribose operon repressor BED32_09145 SM01134 BED32_09145 BED32_09155 SM00260 Two component signalling adaptor domain BED32_09155 SM00448 cheY-homologous receiver domain BED32_09165 SM00345 helix_turn_helix gluconate operon transcriptional repressor BED32_09185 SM00382 ATPases associated with a variety of cellular activities BED32_09205 SM00387 Histidine kinase-like ATPases BED32_09210 SM00421 helix_turn_helix, Lux Regulon BED32_09210 SM00448 cheY-homologous receiver domain BED32_09215 SM00448 cheY-homologous receiver domain BED32_09220 SM00387 Histidine kinase-like ATPases BED32_09235 SM00764 Citrate lyase ligase C-terminal domain BED32_09360 SM00421 helix_turn_helix, Lux Regulon BED32_09360 SM00448 cheY-homologous receiver domain BED32_09435 SM00344 helix_turn_helix ASNC type BED32_09445 SM00829 Enoylreductase BED32_09455 SM01038 Beta galactosidase small chain BED32_09460 SM00354 helix_turn _helix lactose operon repressor BED32_09465 SM00357 Cold shock protein domain BED32_09475 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BED32_09475 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BED32_09495 SM00831 Cation transporter/ATPase, N-terminus BED32_09500 SM00829 Enoylreductase BED32_09530 SM00073 Histidine Phosphotransfer domain BED32_09530 SM00260 Two component signalling adaptor domain BED32_09530 SM00387 Histidine kinase-like ATPases BED32_09530 SM01231 BED32_09530 BED32_09535 SM00260 Two component signalling adaptor domain BED32_09540 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BED32_09540 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BED32_09540 SM00319 Homologues of the ligand binding domain of Tar BED32_09545 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BED32_09545 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BED32_09545 SM00319 Homologues of the ligand binding domain of Tar BED32_09550 SM00138 Methyltransferase, chemotaxis proteins BED32_09555 SM00448 cheY-homologous receiver domain BED32_09560 SM00448 cheY-homologous receiver domain BED32_09605 SM00858 BED32_09605 BED32_09715 SM00530 Helix-turn-helix XRE-family like proteins BED32_09795 SM01400 BED32_09795 BED32_09815 SM00937 BED32_09815 BED32_09845 SM00267 diguanylate cyclase BED32_09870 SM00481 DNA polymerase alpha chain like domain BED32_09945 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BED32_09945 SM00387 Histidine kinase-like ATPases BED32_09960 SM00345 helix_turn_helix gluconate operon transcriptional repressor BED32_10020 SM00345 helix_turn_helix gluconate operon transcriptional repressor BED32_10020 SM00866 BED32_10020 BED32_10045 SM00869 Autotransporter beta-domain BED32_10055 SM00257 Lysin motif BED32_10095 SM00420 helix_turn_helix, Deoxyribose operon repressor BED32_10095 SM01134 BED32_10095 BED32_10115 SM00363 S4 RNA-binding domain BED32_10185 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BED32_10190 SM00382 ATPases associated with a variety of cellular activities BED32_10205 SM00382 ATPases associated with a variety of cellular activities BED32_10215 SM00257 Lysin motif BED32_10270 SM00487 DEAD-like helicases superfamily BED32_10270 SM00491 BED32_10270 BED32_10290 SM00341 Helicase and RNase D C-terminal BED32_10290 SM00474 3'-5' exonuclease BED32_10375 SM01022 BED32_10375 BED32_10395 SM00972 Spore Coat Protein U domain BED32_10400 SM00972 Spore Coat Protein U domain BED32_10405 SM00972 Spore Coat Protein U domain BED32_10430 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BED32_10435 SM00945 ProQ/FINO family BED32_10440 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BED32_10440 SM00245 tail specific protease BED32_10465 SM00346 helix_turn_helix isocitrate lyase regulation BED32_10470 SM00644 BED32_10470 BED32_10500 SM00382 ATPases associated with a variety of cellular activities BED32_10590 SM00382 ATPases associated with a variety of cellular activities BED32_10640 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BED32_10665 SM00873 B3/4 domain BED32_10665 SM00874 tRNA synthetase B5 domain BED32_10665 SM00896 Ferredoxin-fold anticodon binding domain BED32_10670 SM00411 bacterial (prokaryotic) histone like domain BED32_10695 SM00382 ATPases associated with a variety of cellular activities BED32_10815 SM00382 ATPases associated with a variety of cellular activities BED32_10885 SM00354 helix_turn _helix lactose operon repressor BED32_10905 SM00479 BED32_10905 BED32_10960 SM00347 helix_turn_helix multiple antibiotic resistance protein BED32_11040 SM00382 ATPases associated with a variety of cellular activities BED32_11045 SM00382 ATPases associated with a variety of cellular activities BED32_11075 SM00382 ATPases associated with a variety of cellular activities BED32_11110 SM00953 BED32_11110 BED32_11120 SM00091 PAS domain BED32_11120 SM00382 ATPases associated with a variety of cellular activities BED32_11130 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BED32_11155 SM00148 Phospholipase C, catalytic domain (part); domain X BED32_11205 SM00382 ATPases associated with a variety of cellular activities BED32_11205 SM00487 DEAD-like helicases superfamily BED32_11205 SM00490 helicase superfamily c-terminal domain BED32_11205 SM00847 Helicase associated domain (HA2) Add an annotation BED32_11215 SM00530 Helix-turn-helix XRE-family like proteins BED32_11220 SM00020 Trypsin-like serine protease BED32_11235 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BED32_11235 SM00387 Histidine kinase-like ATPases BED32_11235 SM00388 His Kinase A (phosphoacceptor) domain BED32_11240 SM00448 cheY-homologous receiver domain BED32_11240 SM00862 Transcriptional regulatory protein, C terminal BED32_11265 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BED32_11265 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BED32_11280 SM00100 Cyclic nucleotide-monophosphate binding domain BED32_11280 SM00419 helix_turn_helix, cAMP Regulatory protein BED32_11300 SM00871 Bacterial transcription activator, effector binding domain BED32_11305 SM00822 BED32_11305 BED32_11350 SM00644 BED32_11350 BED32_11415 SM00421 helix_turn_helix, Lux Regulon BED32_11440 SM00354 helix_turn _helix lactose operon repressor BED32_11470 SM00342 helix_turn_helix, arabinose operon control protein BED32_11480 SM00382 ATPases associated with a variety of cellular activities BED32_11555 SM00342 helix_turn_helix, arabinose operon control protein BED32_11565 SM00900 BED32_11565 BED32_11575 SM00478 endonuclease III BED32_11575 SM00525 BED32_11575 BED32_11740 SM00382 ATPases associated with a variety of cellular activities BED32_11760 SM00530 Helix-turn-helix XRE-family like proteins BED32_11765 SM00530 Helix-turn-helix XRE-family like proteins BED32_11840 SM00357 Cold shock protein domain BED32_11840 SM00955 BED32_11840 BED32_11860 SM00420 helix_turn_helix, Deoxyribose operon repressor BED32_11860 SM01134 BED32_11860 BED32_11870 SM01007 Class II Aldolase and Adducin N-terminal domain BED32_11885 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BED32_11900 SM00530 Helix-turn-helix XRE-family like proteins BED32_11910 SM00028 Tetratricopeptide repeats BED32_11920 SM00014 Acid phosphatase homologues BED32_11945 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BED32_11945 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BED32_11945 SM00493 BED32_11945 BED32_11960 SM00822 BED32_11960 BED32_11975 SM00363 S4 RNA-binding domain BED32_11985 SM00481 DNA polymerase alpha chain like domain BED32_12020 SM00749 bacterial OsmY and nodulation domain BED32_12075 SM00155 Phospholipase D. Active site motifs. BED32_12085 SM00382 ATPases associated with a variety of cellular activities BED32_12090 SM00382 ATPases associated with a variety of cellular activities BED32_12135 SM00528 Domain in histone-like proteins of HNS family BED32_12140 SM00984 UDP binding domain BED32_12145 SM00448 cheY-homologous receiver domain BED32_12200 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BED32_12200 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BED32_12200 SM00493 BED32_12200 BED32_12220 SM00870 BED32_12220 BED32_12245 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BED32_12260 SM00763 PrkA AAA domain BED32_12290 SM00052 Putative diguanylate phosphodiesterase BED32_12290 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BED32_12290 SM00091 PAS domain BED32_12290 SM00267 diguanylate cyclase BED32_12300 SM01005 Alanine racemase, C-terminal domain BED32_12315 SM00345 helix_turn_helix gluconate operon transcriptional repressor BED32_12355 SM00836 DALR anticodon binding domain BED32_12355 SM01016 Arginyl tRNA synthetase N terminal dom BED32_12435 SM00382 ATPases associated with a variety of cellular activities BED32_12485 SM01007 Class II Aldolase and Adducin N-terminal domain BED32_12495 SM00420 helix_turn_helix, Deoxyribose operon repressor BED32_12495 SM01134 BED32_12495 BED32_12500 SM00387 Histidine kinase-like ATPases BED32_12505 SM00448 cheY-homologous receiver domain BED32_12635 SM00479 BED32_12635 BED32_12650 SM01022 BED32_12650 BED32_12660 SM00487 DEAD-like helicases superfamily BED32_12660 SM00490 helicase superfamily c-terminal domain BED32_12695 SM01091 Transporter associated domain BED32_12730 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BED32_12730 SM00091 PAS domain BED32_12730 SM00267 diguanylate cyclase BED32_12755 SM00357 Cold shock protein domain BED32_12800 SM00342 helix_turn_helix, arabinose operon control protein BED32_12820 SM00382 ATPases associated with a variety of cellular activities BED32_12825 SM00090 RIO-like kinase BED32_12840 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BED32_12840 SM00091 PAS domain BED32_12840 SM00267 diguanylate cyclase BED32_12860 SM00342 helix_turn_helix, arabinose operon control protein BED32_12910 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BED32_12910 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BED32_12920 SM00354 helix_turn _helix lactose operon repressor BED32_12925 SM00640 Glycosyl hydrolases family 32 BED32_12975 SM01329 BED32_12975 BED32_13010 SM00448 cheY-homologous receiver domain BED32_13010 SM00862 Transcriptional regulatory protein, C terminal BED32_13015 SM00387 Histidine kinase-like ATPases BED32_13015 SM00388 His Kinase A (phosphoacceptor) domain BED32_13045 SM00382 ATPases associated with a variety of cellular activities BED32_13055 SM00487 DEAD-like helicases superfamily BED32_13055 SM00490 helicase superfamily c-terminal domain BED32_13055 SM00982 BED32_13055 BED32_13055 SM01058 CarD-like/TRCF domain BED32_13120 SM00382 ATPases associated with a variety of cellular activities BED32_13160 SM00825 Beta-ketoacyl synthase BED32_13170 SM00822 BED32_13170 BED32_13175 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BED32_13205 SM00363 S4 RNA-binding domain BED32_13210 SM00316 Ribosomal protein S1-like RNA-binding domain BED32_13240 SM00421 helix_turn_helix, Lux Regulon BED32_13250 SM00450 Rhodanese Homology Domain BED32_13275 SM00421 helix_turn_helix, Lux Regulon BED32_13275 SM00448 cheY-homologous receiver domain BED32_13335 SM01091 Transporter associated domain BED32_13350 SM00421 helix_turn_helix, Lux Regulon BED32_13420 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BED32_13425 SM00992 Hemimethylated DNA-binding protein YccV like BED32_13430 SM00881 CoA binding domain BED32_13440 SM00851 MGS-like domain BED32_13495 SM00825 Beta-ketoacyl synthase BED32_13515 SM00382 ATPases associated with a variety of cellular activities BED32_13520 SM00981 BED32_13520 BED32_13570 SM00849 Metallo-beta-lactamase superfamily BED32_13625 SM00357 Cold shock protein domain BED32_13630 SM00357 Cold shock protein domain BED32_13635 SM01150 BED32_13635 BED32_13645 SM00382 ATPases associated with a variety of cellular activities BED32_13650 SM00849 Metallo-beta-lactamase superfamily BED32_13655 SM00411 bacterial (prokaryotic) histone like domain BED32_13660 SM00316 Ribosomal protein S1-like RNA-binding domain BED32_13685 SM00870 BED32_13685 BED32_13735 SM00382 ATPases associated with a variety of cellular activities BED32_13745 SM00843 BED32_13745 BED32_13750 SM00344 helix_turn_helix ASNC type BED32_13760 SM00382 ATPases associated with a variety of cellular activities BED32_13765 SM00382 ATPases associated with a variety of cellular activities BED32_13775 SM00316 Ribosomal protein S1-like RNA-binding domain BED32_13780 SM00382 ATPases associated with a variety of cellular activities BED32_13780 SM01086 C-terminal, D2-small domain, of ClpB protein BED32_13790 SM00357 Cold shock protein domain BED32_13795 SM00382 ATPases associated with a variety of cellular activities BED32_13860 SM00382 ATPases associated with a variety of cellular activities BED32_13865 SM00062 Bacterial periplasmic substrate-binding proteins BED32_13865 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BED32_13880 SM00062 Bacterial periplasmic substrate-binding proteins BED32_13880 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BED32_13905 SM00382 ATPases associated with a variety of cellular activities BED32_13940 SM00014 Acid phosphatase homologues BED32_13945 SM01133 BED32_13945 BED32_13950 SM00420 helix_turn_helix, Deoxyribose operon repressor BED32_13950 SM01134 BED32_13950 BED32_13970 SM00936 Penicillin-binding protein 5, C-terminal domain BED32_13975 SM00116 Domain in cystathionine beta-synthase and other proteins. BED32_13990 SM00382 ATPases associated with a variety of cellular activities BED32_13990 SM00930 BED32_13990 BED32_14020 SM00382 ATPases associated with a variety of cellular activities BED32_14055 SM00518 AP endonuclease family 2 BED32_14080 SM00862 Transcriptional regulatory protein, C terminal BED32_14125 SM00841 Elongation factor P, C-terminal BED32_14125 SM01185 BED32_14125 BED32_14145 SM00345 helix_turn_helix gluconate operon transcriptional repressor BED32_14145 SM00895 BED32_14145 BED32_14155 SM00833 Cobalamin synthesis protein cobW C-terminal domain BED32_14160 SM00014 Acid phosphatase homologues BED32_14175 SM00052 Putative diguanylate phosphodiesterase BED32_14195 SM00382 ATPases associated with a variety of cellular activities BED32_14210 SM00363 S4 RNA-binding domain BED32_14215 SM00487 DEAD-like helicases superfamily BED32_14215 SM00490 helicase superfamily c-terminal domain BED32_14285 SM01057 Eukaryotic-type carbonic anhydrase BED32_14325 SM00530 Helix-turn-helix XRE-family like proteins BED32_14340 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BED32_14340 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BED32_14390 SM00387 Histidine kinase-like ATPases BED32_14390 SM00388 His Kinase A (phosphoacceptor) domain BED32_14395 SM00421 helix_turn_helix, Lux Regulon BED32_14395 SM00448 cheY-homologous receiver domain BED32_14400 SM00387 Histidine kinase-like ATPases BED32_14400 SM00388 His Kinase A (phosphoacceptor) domain BED32_14400 SM00448 cheY-homologous receiver domain BED32_14405 SM00434 DNA Topoisomerase IV BED32_14445 SM00852 Probable molybdopterin binding domain BED32_14460 SM01060 BED32_14460 BED32_14470 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BED32_14520 SM00354 helix_turn _helix lactose operon repressor BED32_14585 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BED32_14585 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BED32_14590 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BED32_14625 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BED32_14665 SM00354 helix_turn _helix lactose operon repressor BED32_14700 SM00052 Putative diguanylate phosphodiesterase BED32_14715 SM00382 ATPases associated with a variety of cellular activities BED32_14730 SM00062 Bacterial periplasmic substrate-binding proteins BED32_14775 SM00859 Semialdehyde dehydrogenase, NAD binding domain BED32_14785 SM00342 helix_turn_helix, arabinose operon control protein BED32_14800 SM00345 helix_turn_helix gluconate operon transcriptional repressor BED32_14840 SM00354 helix_turn _helix lactose operon repressor BED32_14880 SM00825 Beta-ketoacyl synthase BED32_14920 SM00463 Small MutS-related domain BED32_14995 SM00382 ATPases associated with a variety of cellular activities BED32_15030 SM00778 Zinc-binding domain of primase-helicase BED32_15100 SM00354 helix_turn _helix lactose operon repressor BED32_15105 SM00867 YceI-like domain BED32_15135 SM00382 ATPases associated with a variety of cellular activities BED32_15180 SM00382 ATPases associated with a variety of cellular activities BED32_15225 SM00448 cheY-homologous receiver domain BED32_15225 SM00850 LytTr DNA-binding domain BED32_15330 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BED32_15330 SM00292 breast cancer carboxy-terminal domain BED32_15330 SM00532 Ligase N family BED32_15335 SM00771 ZipA, C-terminal domain (FtsZ-binding) BED32_15365 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BED32_15365 SM00387 Histidine kinase-like ATPases BED32_15365 SM00388 His Kinase A (phosphoacceptor) domain BED32_15370 SM00448 cheY-homologous receiver domain BED32_15370 SM00862 Transcriptional regulatory protein, C terminal BED32_15380 SM00382 ATPases associated with a variety of cellular activities BED32_15390 SM00382 ATPases associated with a variety of cellular activities BED32_15435 SM01130 BED32_15435 BED32_15480 SM00919 Malic enzyme, NAD binding domain BED32_15480 SM01274 BED32_15480 BED32_15500 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BED32_15515 SM00421 helix_turn_helix, Lux Regulon BED32_15515 SM00448 cheY-homologous receiver domain BED32_15640 SM01130 BED32_15640 BED32_15705 SM00382 ATPases associated with a variety of cellular activities BED32_15740 SM00052 Putative diguanylate phosphodiesterase BED32_15740 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BED32_15740 SM00091 PAS domain BED32_15740 SM00267 diguanylate cyclase BED32_15770 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BED32_15770 SM00387 Histidine kinase-like ATPases BED32_15770 SM00388 His Kinase A (phosphoacceptor) domain BED32_15775 SM00448 cheY-homologous receiver domain BED32_15775 SM00862 Transcriptional regulatory protein, C terminal BED32_15820 SM00420 helix_turn_helix, Deoxyribose operon repressor BED32_15820 SM01134 BED32_15820 BED32_15825 SM00116 Domain in cystathionine beta-synthase and other proteins. BED32_15935 SM00116 Domain in cystathionine beta-synthase and other proteins. BED32_15935 SM01240 BED32_15935 BED32_15960 SM00382 ATPases associated with a variety of cellular activities BED32_15970 SM00564 beta-propeller repeat BED32_15990 SM00530 Helix-turn-helix XRE-family like proteins BED32_15995 SM00028 Tetratricopeptide repeats BED32_16005 SM00562 BED32_16005 BED32_16020 SM01359 BED32_16020 BED32_16020 SM01360 BED32_16020 BED32_16025 SM00869 Autotransporter beta-domain BED32_16055 SM00271 DnaJ molecular chaperone homology domain BED32_16150 SM00938 Nitrogen regulatory protein P-II BED32_16160 SM00382 ATPases associated with a variety of cellular activities BED32_16160 SM00448 cheY-homologous receiver domain BED32_16170 SM00387 Histidine kinase-like ATPases BED32_16170 SM00388 His Kinase A (phosphoacceptor) domain BED32_16180 SM01211 BED32_16180 BED32_16185 SM00062 Bacterial periplasmic substrate-binding proteins BED32_16245 SM00358 Double-stranded RNA binding motif BED32_16245 SM00535 Ribonuclease III family BED32_16295 SM00487 DEAD-like helicases superfamily BED32_16295 SM00490 helicase superfamily c-terminal domain BED32_16310 SM00248 ankyrin repeats BED32_16330 SM00986 Uracil DNA glycosylase superfamily BED32_16330 SM00987 UreE urease accessory protein, C-terminal domain BED32_16390 SM00342 helix_turn_helix, arabinose operon control protein BED32_16475 SM00988 UreE urease accessory protein, N-terminal domain BED32_16495 SM00382 ATPases associated with a variety of cellular activities BED32_16500 SM00382 ATPases associated with a variety of cellular activities BED32_16530 SM00450 Rhodanese Homology Domain BED32_16545 SM00357 Cold shock protein domain BED32_16570 SM00342 helix_turn_helix, arabinose operon control protein BED32_16590 SM00345 helix_turn_helix gluconate operon transcriptional repressor BED32_16620 SM00382 ATPases associated with a variety of cellular activities BED32_16640 SM00479 BED32_16640 BED32_16655 SM00849 Metallo-beta-lactamase superfamily BED32_16660 SM00257 Lysin motif BED32_16735 SM00382 ATPases associated with a variety of cellular activities BED32_16735 SM00930 BED32_16735 BED32_16775 SM01322 BED32_16775 BED32_16795 SM00977 TilS substrate C-terminal domain BED32_16815 SM00481 DNA polymerase alpha chain like domain BED32_16845 SM00935 Outer membrane protein (OmpH-like) BED32_16855 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BED32_16900 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BED32_16945 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BED32_16945 SM00475 5'-3' exonuclease BED32_16990 SM00925 MltA specific insert domain BED32_17010 SM00646 BED32_17010 BED32_17070 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BED32_17085 SM00927 DNA mismatch repair enzyme MutH BED32_17105 SM00563 Phosphate acyltransferases BED32_17115 SM00354 helix_turn _helix lactose operon repressor BED32_17140 SM00849 Metallo-beta-lactamase superfamily BED32_17160 SM00862 Transcriptional regulatory protein, C terminal BED32_17210 SM00382 ATPases associated with a variety of cellular activities BED32_17230 SM00947 Carbonic anhydrase BED32_17240 SM00822 BED32_17240 BED32_17250 SM00271 DnaJ molecular chaperone homology domain BED32_17260 SM00091 PAS domain BED32_17260 SM00267 diguanylate cyclase BED32_17285 SM00530 Helix-turn-helix XRE-family like proteins BED32_17295 SM00530 Helix-turn-helix XRE-family like proteins BED32_17400 SM00937 BED32_17400 BED32_17430 SM00387 Histidine kinase-like ATPases BED32_17430 SM00388 His Kinase A (phosphoacceptor) domain BED32_17435 SM00448 cheY-homologous receiver domain BED32_17435 SM00862 Transcriptional regulatory protein, C terminal BED32_17470 SM00822 BED32_17470 BED32_17505 SM01011 Aminopeptidase P, N-terminal domain BED32_17530 SM01192 BED32_17530 BED32_17530 SM01193 BED32_17530 BED32_17545 SM00954 Region found in RelA / SpoT proteins BED32_17555 SM00073 Histidine Phosphotransfer domain BED32_17555 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BED32_17555 SM00387 Histidine kinase-like ATPases BED32_17555 SM00388 His Kinase A (phosphoacceptor) domain BED32_17555 SM00448 cheY-homologous receiver domain BED32_17560 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BED32_17565 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BED32_17615 SM00382 ATPases associated with a variety of cellular activities BED32_17625 SM00487 DEAD-like helicases superfamily BED32_17625 SM00490 helicase superfamily c-terminal domain BED32_17625 SM00847 Helicase associated domain (HA2) Add an annotation BED32_17685 SM00382 ATPases associated with a variety of cellular activities BED32_17690 SM00947 Carbonic anhydrase BED32_17745 SM00342 helix_turn_helix, arabinose operon control protein BED32_17770 SM00345 helix_turn_helix gluconate operon transcriptional repressor BED32_17770 SM00895 BED32_17770 BED32_17785 SM00644 BED32_17785 BED32_17810 SM01240 BED32_17810 BED32_17835 SM00957 SecA DEAD-like domain BED32_17835 SM00958 SecA preprotein cross-linking domain BED32_17855 SM00864 Tubulin/FtsZ family, GTPase domain BED32_17855 SM00865 Tubulin/FtsZ family, C-terminal domain BED32_17860 SM00842 Cell division protein FtsA BED32_17935 SM00354 helix_turn _helix lactose operon repressor BED32_17960 SM00917 LeuA allosteric (dimerisation) domain BED32_17965 SM01329 BED32_17965 BED32_18030 SM00382 ATPases associated with a variety of cellular activities BED32_18040 SM00486 DNA polymerase type-B family BED32_18045 SM00487 DEAD-like helicases superfamily BED32_18045 SM00490 helicase superfamily c-terminal domain BED32_18050 SM00634 Bacterial Ig-like domain (group 1) BED32_18060 SM00271 DnaJ molecular chaperone homology domain BED32_18080 SM00650 Ribosomal RNA adenine dimethylases BED32_18115 SM00851 MGS-like domain BED32_18115 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BED32_18120 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BED32_18150 SM00904 Riboflavin kinase BED32_18175 SM00271 DnaJ molecular chaperone homology domain BED32_18190 SM00247 Beta/gamma crystallins BED32_18200 SM00852 Probable molybdopterin binding domain BED32_18240 SM00448 cheY-homologous receiver domain BED32_18240 SM00862 Transcriptional regulatory protein, C terminal BED32_18250 SM00342 helix_turn_helix, arabinose operon control protein BED32_18250 SM00871 Bacterial transcription activator, effector binding domain BED32_18255 SM00855 Phosphoglycerate mutase family BED32_18275 SM00831 Cation transporter/ATPase, N-terminus BED32_18285 SM00267 diguanylate cyclase BED32_18295 SM00382 ATPases associated with a variety of cellular activities BED32_18310 SM00829 Enoylreductase BED32_18345 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain BED32_18350 SM01133 BED32_18350 BED32_18375 SM00749 bacterial OsmY and nodulation domain BED32_18420 SM00267 diguanylate cyclase BED32_18450 SM00640 Glycosyl hydrolases family 32 BED32_18455 SM00354 helix_turn _helix lactose operon repressor BED32_18460 SM00091 PAS domain BED32_18510 SM01120 BED32_18510 BED32_18565 SM00382 ATPases associated with a variety of cellular activities BED32_18585 SM01133 BED32_18585 BED32_18695 SM00382 ATPases associated with a variety of cellular activities BED32_18700 SM00382 ATPases associated with a variety of cellular activities BED32_18730 SM00345 helix_turn_helix gluconate operon transcriptional repressor BED32_18730 SM00866 BED32_18730 BED32_18755 SM00382 ATPases associated with a variety of cellular activities BED32_18760 SM00382 ATPases associated with a variety of cellular activities BED32_18805 SM00382 ATPases associated with a variety of cellular activities BED32_18895 SM00487 DEAD-like helicases superfamily BED32_18895 SM00490 helicase superfamily c-terminal domain BED32_18900 SM00028 Tetratricopeptide repeats BED32_18905 SM00316 Ribosomal protein S1-like RNA-binding domain BED32_18905 SM00322 K homology RNA-binding domain BED32_18910 SM01387 BED32_18910 BED32_18925 SM00173 Ras subfamily of RAS small GTPases BED32_18930 SM00316 Ribosomal protein S1-like RNA-binding domain BED32_18930 SM00322 K homology RNA-binding domain BED32_18965 SM00382 ATPases associated with a variety of cellular activities BED32_18975 SM01103 BED32_18975 BED32_18990 SM00448 cheY-homologous receiver domain BED32_18990 SM00862 Transcriptional regulatory protein, C terminal BED32_18995 SM00387 Histidine kinase-like ATPases BED32_18995 SM00388 His Kinase A (phosphoacceptor) domain BED32_19060 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BED32_19060 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BED32_19090 SM01091 Transporter associated domain BED32_19180 SM00967 RNA 2'-O ribose methyltransferase substrate binding BED32_19185 SM00316 Ribosomal protein S1-like RNA-binding domain BED32_19185 SM00357 Cold shock protein domain BED32_19185 SM00955 BED32_19185 BED32_19195 SM00788 Adenylosuccinate synthetase BED32_19205 SM00244 prohibitin homologues BED32_19210 SM00244 prohibitin homologues BED32_19230 SM00853 MutL C terminal dimerisation domain BED32_19230 SM01340 BED32_19230 BED32_19235 SM00257 Lysin motif BED32_19235 SM00646 BED32_19235 BED32_19265 SM00479 BED32_19265 BED32_19325 SM00841 Elongation factor P, C-terminal BED32_19325 SM01185 BED32_19325 BED32_19350 SM00883 Chaperonin 10 Kd subunit BED32_19415 SM00729 Elongator protein 3, MiaB family, Radical SAM BED32_19455 SM00382 ATPases associated with a variety of cellular activities BED32_19495 SM00382 ATPases associated with a variety of cellular activities BED32_19500 SM00965 Secretin and TonB N terminus short domain BED32_19565 SM00382 ATPases associated with a variety of cellular activities BED32_19615 SM00342 helix_turn_helix, arabinose operon control protein BED32_19685 SM00421 helix_turn_helix, Lux Regulon BED32_19685 SM00448 cheY-homologous receiver domain BED32_19750 SM00798 AICARFT/IMPCHase bienzyme BED32_19750 SM00851 MGS-like domain BED32_19755 SM01209 BED32_19755 BED32_19755 SM01210 BED32_19755 BED32_19765 SM00411 bacterial (prokaryotic) histone like domain BED32_19820 SM00876 Biotin and Thiamin Synthesis associated domain BED32_19830 SM00663 RNA polymerase I subunit A N-terminus BED32_19855 SM00649 Ribosomal protein L11/L12 BED32_19860 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BED32_19860 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BED32_19990 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BED32_19995 SM01004 Delta-aminolevulinic acid dehydratase BED32_20090 SM00382 ATPases associated with a variety of cellular activities BED32_20140 SM00382 ATPases associated with a variety of cellular activities BED32_20145 SM00382 ATPases associated with a variety of cellular activities BED32_20190 SM00382 ATPases associated with a variety of cellular activities BED32_20195 SM00382 ATPases associated with a variety of cellular activities BED32_20195 SM00962 SRP54-type protein, GTPase domain BED32_20195 SM00963 SRP54-type protein, helical bundle domain BED32_20290 SM00341 Helicase and RNase D C-terminal BED32_20290 SM00487 DEAD-like helicases superfamily BED32_20290 SM00490 helicase superfamily c-terminal domain BED32_20290 SM00956 BED32_20290 BED32_20360 SM01219 BED32_20360 BED32_20465 SM00984 UDP binding domain BED32_20490 SM00357 Cold shock protein domain BED32_20490 SM00382 ATPases associated with a variety of cellular activities BED32_20490 SM00959 Rho termination factor, N-terminal domain BED32_20500 SM00487 DEAD-like helicases superfamily BED32_20500 SM00490 helicase superfamily c-terminal domain BED32_20510 SM00060 Fibronectin type 3 domain BED32_20555 SM00778 Zinc-binding domain of primase-helicase BED32_20555 SM00885 D5 N terminal like BED32_20590 SM00342 helix_turn_helix, arabinose operon control protein BED32_20600 SM00382 ATPases associated with a variety of cellular activities BED32_20630 SM00342 helix_turn_helix, arabinose operon control protein BED32_20675 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BED32_20690 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BED32_20690 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BED32_20690 SM01358 BED32_20690 BED32_20705 SM00966 SpoVT / AbrB like domain BED32_20715 SM00345 helix_turn_helix gluconate operon transcriptional repressor BED32_20795 SM00642 Alpha-amylase domain BED32_20875 SM00448 cheY-homologous receiver domain BED32_20875 SM00862 Transcriptional regulatory protein, C terminal BED32_20880 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BED32_20880 SM00387 Histidine kinase-like ATPases BED32_20880 SM00388 His Kinase A (phosphoacceptor) domain BED32_20885 SM00342 helix_turn_helix, arabinose operon control protein BED32_20895 SM00971 Serine acetyltransferase, N-terminal BED32_20915 SM00450 Rhodanese Homology Domain BED32_20945 SM00829 Enoylreductase BED32_20985 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain BED32_20985 SM01232 BED32_20985 BED32_21085 SM00778 Zinc-binding domain of primase-helicase BED32_21125 SM00849 Metallo-beta-lactamase superfamily BED32_21135 SM00052 Putative diguanylate phosphodiesterase BED32_21135 SM00091 PAS domain BED32_21135 SM00267 diguanylate cyclase BED32_21170 SM00072 Guanylate kinase homologues. BED32_21175 SM01409 BED32_21175 BED32_21180 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BED32_21180 SM00954 Region found in RelA / SpoT proteins BED32_21190 SM00487 DEAD-like helicases superfamily BED32_21190 SM00490 helicase superfamily c-terminal domain BED32_21210 SM00421 helix_turn_helix, Lux Regulon BED32_21215 SM00421 helix_turn_helix, Lux Regulon BED32_21250 SM01230 BED32_21250 BED32_21260 SM00091 PAS domain BED32_21260 SM00387 Histidine kinase-like ATPases BED32_21260 SM00388 His Kinase A (phosphoacceptor) domain BED32_21265 SM00382 ATPases associated with a variety of cellular activities BED32_21265 SM00448 cheY-homologous receiver domain BED32_21270 SM00729 Elongator protein 3, MiaB family, Radical SAM BED32_21285 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BED32_21285 SM00474 3'-5' exonuclease BED32_21285 SM00475 5'-3' exonuclease BED32_21285 SM00482 DNA polymerase A domain BED32_21345 SM00345 helix_turn_helix gluconate operon transcriptional repressor BED32_21345 SM00895 BED32_21345 BED32_21355 SM00354 helix_turn _helix lactose operon repressor BED32_21375 SM00382 ATPases associated with a variety of cellular activities BED32_21390 SM00382 ATPases associated with a variety of cellular activities BED32_21395 SM00327 von Willebrand factor (vWF) type A domain BED32_21410 SM00344 helix_turn_helix ASNC type BED32_21420 SM01228 BED32_21420 BED32_21465 SM00382 ATPases associated with a variety of cellular activities BED32_21500 SM00382 ATPases associated with a variety of cellular activities BED32_21515 SM00062 Bacterial periplasmic substrate-binding proteins BED32_21545 SM00421 helix_turn_helix, Lux Regulon BED32_21545 SM00448 cheY-homologous receiver domain BED32_21550 SM00387 Histidine kinase-like ATPases BED32_21550 SM00388 His Kinase A (phosphoacceptor) domain BED32_21560 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BED32_21560 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BED32_21570 SM00382 ATPases associated with a variety of cellular activities BED32_21570 SM00930 BED32_21570 BED32_21595 SM01234 BED32_21595 BED32_21645 SM00634 Bacterial Ig-like domain (group 1) BED32_21655 SM00886 Stress responsive A/B Barrel Domain BED32_21740 SM00530 Helix-turn-helix XRE-family like proteins BED32_21960 SM00857 Resolvase, N terminal domain BED32_21965 SM00869 Autotransporter beta-domain BED32_21975 SM00912 haemagglutination activity domain BED32_22110 SM00634 Bacterial Ig-like domain (group 1) BED32_22120 SM00886 Stress responsive A/B Barrel Domain