locus-tag class description BED33_00030 IPR038717 Tc1-like transposase, DDE domain BED33_00030 IPR025959 Winged helix-turn helix domain BED33_00030 IPR009057 Homeobox-like domain superfamily BED33_00030 IPR012337 Ribonuclease H-like superfamily BED33_00035 IPR003696 Carbamoyltransferase BED33_00035 IPR031730 Carbamoyltransferase, C-terminal BED33_00035 IPR038152 Carbamoyltransferase, C-terminal domain superfamily BED33_00050 IPR036117 DhaL domain superfamily BED33_00050 IPR004007 DhaL domain BED33_00050 IPR012737 Dihydroxyacetone kinase, subunit L BED33_00055 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 BED33_00055 IPR004006 DhaK domain BED33_00060 IPR016205 Glycerol dehydrogenase BED33_00060 IPR018211 Alcohol dehydrogenase, iron-type, conserved site BED33_00060 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA BED33_00065 IPR001036 Acriflavin resistance protein BED33_00065 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BED33_00070 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BED33_00070 IPR006143 RND efflux pump, membrane fusion protein BED33_00075 IPR003876 Arginine deiminase BED33_00090 IPR002201 Glycosyl transferase, family 9 BED33_00090 IPR011916 Lipopolysaccharide heptosyltransferase III, putative BED33_00095 IPR000577 Carbohydrate kinase, FGGY BED33_00095 IPR033676 Autoinducer-2 kinase BED33_00095 IPR018485 Carbohydrate kinase, FGGY, C-terminal BED33_00095 IPR018484 Carbohydrate kinase, FGGY, N-terminal BED33_00100 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_00100 IPR007324 Sugar-binding domain, putative BED33_00100 IPR037171 NagB/RpiA transferase-like BED33_00100 IPR012318 Crp-type HTH domain BED33_00105 IPR030281 Autoinducer 2 import ATP-binding protein LsrA BED33_00105 IPR003593 AAA+ ATPase domain BED33_00105 IPR003439 ABC transporter-like BED33_00105 IPR017871 ABC transporter, conserved site BED33_00105 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_00110 IPR001851 ABC transporter, permease BED33_00115 IPR001851 ABC transporter, permease BED33_00120 IPR025997 Periplasmic binding protein BED33_00120 IPR028082 Periplasmic binding protein-like I BED33_00120 IPR030159 Autoinducer 2 ABC transporter, substrate-binding protein LsrB BED33_00125 IPR033673 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase BED33_00125 IPR002915 DeoC/FbaB/ lacD aldolase BED33_00125 IPR013785 Aldolase-type TIM barrel BED33_00125 IPR041720 Aldolase FbaB-like, archaeal-type BED33_00130 IPR007138 Antibiotic biosynthesis monooxygenase domain BED33_00130 IPR033672 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase BED33_00130 IPR011008 Dimeric alpha-beta barrel BED33_00140 IPR019637 Protein of unknown function DUF2501 BED33_00145 IPR001207 Transposase, mutator type BED33_00155 IPR009057 Homeobox-like domain superfamily BED33_00155 IPR002514 Transposase IS3/IS911family BED33_00175 IPR030923 LPS export ABC transporter permease LptG BED33_00175 IPR005495 Permease LptG/LptF-related BED33_00180 IPR030922 LPS export ABC transporter permease LptF BED33_00180 IPR005495 Permease LptG/LptF-related BED33_00185 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal BED33_00185 IPR023042 Peptidase M17, leucine aminopeptidase BED33_00185 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal BED33_00185 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B BED33_00190 IPR036768 DNA polymerase III subunit chi superfamily BED33_00190 IPR007459 DNA polymerase III chi subunit, HolC BED33_00195 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain BED33_00195 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm BED33_00195 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily BED33_00195 IPR002300 Aminoacyl-tRNA synthetase, class Ia BED33_00195 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site BED33_00195 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm BED33_00195 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding BED33_00195 IPR033705 Valyl tRNA synthetase, anticodon-binding domain BED33_00195 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding BED33_00195 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED33_00195 IPR002303 Valine-tRNA ligase BED33_00200 IPR016181 Acyl-CoA N-acyltransferase BED33_00200 IPR000182 GNAT domain BED33_00205 IPR016716 Regulator of ribonuclease activity B BED33_00205 IPR036701 RraB-like superfamily BED33_00205 IPR009671 Regulator of ribonuclease activity B domain BED33_00210 IPR024904 Ornithine carbamoyltransferase BED33_00210 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain BED33_00210 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding BED33_00210 IPR006130 Aspartate/ornithine carbamoyltransferase BED33_00210 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily BED33_00210 IPR002292 Ornithine/putrescine carbamoyltransferase BED33_00215 IPR004375 YhcH/YjgK/YiaL family BED33_00215 IPR037012 YhcH/YjgK/YiaL superfamily BED33_00225 IPR035906 MetI-like superfamily BED33_00225 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED33_00235 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal BED33_00235 IPR003593 AAA+ ATPase domain BED33_00235 IPR003439 ABC transporter-like BED33_00235 IPR017871 ABC transporter, conserved site BED33_00235 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_00240 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_00240 IPR003593 AAA+ ATPase domain BED33_00240 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal BED33_00240 IPR003439 ABC transporter-like BED33_00240 IPR017871 ABC transporter, conserved site BED33_00255 IPR001989 Radical-activating enzyme, conserved site BED33_00255 IPR034457 Organic radical-activating enzymes BED33_00255 IPR013785 Aldolase-type TIM barrel BED33_00255 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic BED33_00270 IPR036390 Winged helix DNA-binding domain superfamily BED33_00270 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily BED33_00270 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_00270 IPR011663 UbiC transcription regulator-associated BED33_00270 IPR000524 Transcription regulator HTH, GntR BED33_00270 IPR012702 Phosphonate C-P lyase system, transcriptional regulator PhnF BED33_00275 IPR009609 Phosphonate metabolism PhnG BED33_00280 IPR008772 Bacterial phosphonate metabolism, PhnH BED33_00280 IPR038058 PhnH-like superfamily BED33_00285 IPR008773 Phosphonate metabolism protein PhnI BED33_00290 IPR010306 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase BED33_00295 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_00295 IPR012700 Phosphonate C-P lyase system, PhnK BED33_00295 IPR017871 ABC transporter, conserved site BED33_00295 IPR003439 ABC transporter-like BED33_00295 IPR003593 AAA+ ATPase domain BED33_00300 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_00300 IPR003593 AAA+ ATPase domain BED33_00300 IPR012701 Phosphonate C-P lyase system, PhnL BED33_00300 IPR017871 ABC transporter, conserved site BED33_00300 IPR003439 ABC transporter-like BED33_00305 IPR032466 Metal-dependent hydrolase BED33_00305 IPR011059 Metal-dependent hydrolase, composite domain superfamily BED33_00305 IPR013108 Amidohydrolase 3 BED33_00305 IPR012696 Phosphonate metabolism PhnM BED33_00315 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BED33_00315 IPR017693 Phosphonate metabolism protein PhnP BED33_00315 IPR035682 Phosphonate metabolism protein, MBL domain BED33_00315 IPR001279 Metallo-beta-lactamase BED33_00320 IPR000534 Semialdehyde dehydrogenase, NAD-binding BED33_00320 IPR036291 NAD(P)-binding domain superfamily BED33_00320 IPR016040 NAD(P)-binding domain BED33_00325 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily BED33_00325 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family BED33_00335 IPR012349 FMN-binding split barrel BED33_00335 IPR011194 Uncharacterised protein family UPF0306 BED33_00345 IPR003593 AAA+ ATPase domain BED33_00345 IPR005116 Transport-associated OB, type 1 BED33_00345 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_00345 IPR040582 MalK, OB fold domain BED33_00345 IPR008995 Molybdate/tungstate binding, C-terminal BED33_00345 IPR017871 ABC transporter, conserved site BED33_00345 IPR003439 ABC transporter-like BED33_00350 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED33_00350 IPR035906 MetI-like superfamily BED33_00360 IPR006059 Bacterial extracellular solute-binding protein BED33_00370 IPR008929 Chondroitin AC/alginate lyase BED33_00370 IPR012480 Heparinase II/III-like BED33_00370 IPR008397 Alginate lyase domain BED33_00375 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal BED33_00375 IPR000310 Orn/Lys/Arg decarboxylase, major domain BED33_00375 IPR011006 CheY-like superfamily BED33_00375 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily BED33_00375 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal BED33_00375 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED33_00375 IPR011193 Ornithine/lysine/arginine decarboxylase BED33_00375 IPR027464 Ornithine decarboxylase, N-terminal BED33_00375 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED33_00375 IPR015424 Pyridoxal phosphate-dependent transferase BED33_00375 IPR027568 Ornithine decarboxylase SpeF BED33_00380 IPR002293 Amino acid/polyamine transporter I BED33_00380 IPR004754 Amino acid antiporter BED33_00380 IPR027566 Putrescine transporter PotE BED33_00390 IPR000182 GNAT domain BED33_00390 IPR016181 Acyl-CoA N-acyltransferase BED33_00410 IPR021144 Uncharacterised protein family UPF0597 BED33_00410 IPR005130 Serine dehydratase-like, alpha subunit BED33_00420 IPR012640 Membrane lipoprotein, lipid attachment site BED33_00420 IPR003423 Outer membrane efflux protein BED33_00420 IPR010131 RND efflux system, outer membrane lipoprotein, NodT BED33_00425 IPR011251 Luciferase-like domain BED33_00425 IPR019949 Luciferase family oxidoreductase, group 1 BED33_00425 IPR036661 Luciferase-like domain superfamily BED33_00435 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site BED33_00435 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_00435 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily BED33_00435 IPR001650 Helicase, C-terminal BED33_00435 IPR021046 Cold-shock protein, DEAD box A, C-terminal BED33_00435 IPR014001 Helicase superfamily 1/2, ATP-binding domain BED33_00435 IPR034415 CsdA, RNA recognition motif BED33_00435 IPR014014 RNA helicase, DEAD-box type, Q motif BED33_00435 IPR028618 ATP-dependent RNA helicase DeaD BED33_00435 IPR011545 DEAD/DEAH box helicase domain BED33_00435 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain BED33_00440 IPR019734 Tetratricopeptide repeat BED33_00440 IPR011990 Tetratricopeptide-like helical domain superfamily BED33_00440 IPR013026 Tetratricopeptide repeat-containing domain BED33_00440 IPR023605 Lipoprotein NlpI BED33_00440 IPR013105 Tetratricopeptide repeat 2 BED33_00445 IPR015847 Exoribonuclease, phosphorolytic domain 2 BED33_00445 IPR036345 Exoribonuclease, PH domain 2 superfamily BED33_00445 IPR004088 K Homology domain, type 1 BED33_00445 IPR012162 Polyribonucleotide nucleotidyltransferase BED33_00445 IPR012340 Nucleic acid-binding, OB-fold BED33_00445 IPR027408 PNPase/RNase PH domain superfamily BED33_00445 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain BED33_00445 IPR020568 Ribosomal protein S5 domain 2-type fold BED33_00445 IPR022967 RNA-binding domain, S1 BED33_00445 IPR003029 S1 domain BED33_00445 IPR036612 K Homology domain, type 1 superfamily BED33_00445 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily BED33_00445 IPR004087 K Homology domain BED33_00445 IPR001247 Exoribonuclease, phosphorolytic domain 1 BED33_00450 IPR005290 Ribosomal protein S15, bacterial-type BED33_00450 IPR000589 Ribosomal protein S15 BED33_00450 IPR009068 S15/NS1, RNA-binding BED33_00455 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal BED33_00455 IPR002501 Pseudouridine synthase II, N-terminal BED33_00455 IPR020103 Pseudouridine synthase, catalytic domain superfamily BED33_00455 IPR032819 tRNA pseudouridylate synthase B, C-terminal BED33_00455 IPR015947 PUA-like superfamily BED33_00455 IPR036974 PUA domain superfamily BED33_00455 IPR014780 tRNA pseudouridine synthase II, TruB BED33_00460 IPR015946 K homology domain-like, alpha/beta BED33_00460 IPR000238 Ribosome-binding factor A BED33_00460 IPR023799 Ribosome-binding factor A domain superfamily BED33_00460 IPR020053 Ribosome-binding factor A, conserved site BED33_00465 IPR000795 Transcription factor, GTP-binding domain BED33_00465 IPR000178 Translation initiation factor aIF-2, bacterial-like BED33_00465 IPR023115 Translation initiation factor IF- 2, domain 3 BED33_00465 IPR015760 Translation initiation factor IF- 2 BED33_00465 IPR036925 Translation initiation factor IF-2, domain 3 superfamily BED33_00465 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_00465 IPR005225 Small GTP-binding protein domain BED33_00465 IPR006847 Translation initiation factor IF-2, N-terminal BED33_00465 IPR004161 Translation elongation factor EFTu-like, domain 2 BED33_00465 IPR009000 Translation protein, beta-barrel domain superfamily BED33_00465 IPR009061 Putative DNA-binding domain superfamily BED33_00465 IPR013575 Initiation factor 2 associated domain, bacterial BED33_00470 IPR012340 Nucleic acid-binding, OB-fold BED33_00470 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical BED33_00470 IPR030842 Transcription termination/antitermination protein NusA, bacterial BED33_00470 IPR025249 KH domain, NusA-like BED33_00470 IPR015946 K homology domain-like, alpha/beta BED33_00470 IPR010214 Transcription termination factor NusA, C-terminal duplication BED33_00470 IPR013735 Transcription factor NusA, N-terminal BED33_00470 IPR036555 NusA, N-terminal domain superfamily BED33_00470 IPR003029 S1 domain BED33_00470 IPR022967 RNA-binding domain, S1 BED33_00470 IPR009019 K homology domain superfamily, prokaryotic type BED33_00470 IPR010213 Transcription termination factor NusA BED33_00475 IPR028989 Ribosome maturation factor RimP, N-terminal BED33_00475 IPR003728 Ribosome maturation factor RimP BED33_00475 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily BED33_00475 IPR035956 RimP, N-terminal domain superfamily BED33_00475 IPR028998 Ribosome maturation factor RimP, C-terminal BED33_00490 IPR004692 Preprotein translocase SecG subunit BED33_00495 IPR006352 Phosphoglucosamine mutase, bacterial type BED33_00495 IPR005841 Alpha-D-phosphohexomutase superfamily BED33_00495 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I BED33_00495 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily BED33_00495 IPR005843 Alpha-D-phosphohexomutase, C-terminal BED33_00495 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III BED33_00495 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II BED33_00495 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III BED33_00495 IPR016066 Alpha-D-phosphohexomutase, conserved site BED33_00500 IPR006390 Dihydropteroate synthase BED33_00500 IPR000489 Pterin-binding domain BED33_00500 IPR011005 Dihydropteroate synthase-like BED33_00505 IPR005936 Peptidase, FtsH BED33_00505 IPR000642 Peptidase M41 BED33_00505 IPR037219 Peptidase M41-like BED33_00505 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_00505 IPR011546 Peptidase M41, FtsH extracellular BED33_00505 IPR003593 AAA+ ATPase domain BED33_00505 IPR041569 AAA ATPase, AAA+ lid domain BED33_00505 IPR003960 ATPase, AAA-type, conserved site BED33_00505 IPR003959 ATPase, AAA-type, core BED33_00510 IPR002877 Ribosomal RNA methyltransferase FtsJ domain BED33_00510 IPR015507 Ribosomal RNA large subunit methyltransferase E BED33_00510 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED33_00510 IPR004512 Ribosomal RNA methyltransferase E, gammaproteobacteria BED33_00515 IPR001890 RNA-binding, CRM domain BED33_00515 IPR017924 RNA-binding protein YhbY BED33_00515 IPR035920 YhbY-like superfamily BED33_00520 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily BED33_00520 IPR023459 Transcription elongation factor GreA/GreB family BED33_00520 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal BED33_00520 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal BED33_00520 IPR018151 Transcription elongation factor, GreA/GreB, conserved site BED33_00520 IPR006359 Transcription elongation factor GreA BED33_00520 IPR028624 Transcription elongation factor GreA/GreB BED33_00520 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily BED33_00525 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C BED33_00525 IPR012338 Beta-lactamase/transpeptidase-like BED33_00530 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_00530 IPR039420 Transcriptional regulatory protein WalR-like BED33_00530 IPR001789 Signal transduction response regulator, receiver domain BED33_00530 IPR001867 OmpR/PhoB-type DNA-binding domain BED33_00530 IPR011006 CheY-like superfamily BED33_00535 IPR005467 Histidine kinase domain BED33_00535 IPR003594 Histidine kinase/HSP90-like ATPase BED33_00535 IPR003660 HAMP domain BED33_00535 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BED33_00535 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BED33_00535 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BED33_00535 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BED33_00540 IPR006074 GTP1/OBG, conserved site BED33_00540 IPR006169 GTP1/OBG domain BED33_00540 IPR031167 OBG-type guanine nucleotide-binding (G) domain BED33_00540 IPR006073 GTP binding domain BED33_00540 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_00540 IPR014100 GTP-binding protein Obg/CgtA BED33_00540 IPR036726 GTP1/OBG domain superfamily BED33_00540 IPR035101 GTP-binding protein, Obg-type BED33_00545 IPR000620 EamA domain BED33_00550 IPR001684 Ribosomal protein L27 BED33_00550 IPR018261 Ribosomal protein L27, conserved site BED33_00555 IPR001787 Ribosomal protein L21 BED33_00555 IPR028909 Ribosomal protein L21-like BED33_00555 IPR036164 L21-like superfamily BED33_00555 IPR018258 Ribosomal protein L21, conserved site BED33_00560 IPR008949 Isoprenoid synthase domain superfamily BED33_00560 IPR000092 Polyprenyl synthetase BED33_00560 IPR033749 Polyprenyl synthetase, conserved site BED33_00570 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BED33_00570 IPR038722 Ner, winged helix-turn-helix DNA-binding domain BED33_00575 IPR036291 NAD(P)-binding domain superfamily BED33_00575 IPR023958 Malate dehydrogenase, type 1, bacterial BED33_00575 IPR001236 Lactate/malate dehydrogenase, N-terminal BED33_00575 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal BED33_00575 IPR001252 Malate dehydrogenase, active site BED33_00575 IPR010097 Malate dehydrogenase, type 1 BED33_00575 IPR022383 Lactate/malate dehydrogenase, C-terminal BED33_00575 IPR001557 L-lactate/malate dehydrogenase BED33_00580 IPR036390 Winged helix DNA-binding domain superfamily BED33_00580 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_00580 IPR020900 Arginine repressor, DNA-binding domain BED33_00580 IPR036251 Arginine repressor, C-terminal domain superfamily BED33_00580 IPR020899 Arginine repressor, C-terminal BED33_00580 IPR001669 Arginine repressor BED33_00590 IPR005757 Murein peptide ligase BED33_00590 IPR036565 Mur-like, catalytic domain superfamily BED33_00590 IPR004101 Mur ligase, C-terminal BED33_00590 IPR000713 Mur ligase, N-terminal catalytic domain BED33_00590 IPR013221 Mur ligase, central BED33_00590 IPR036615 Mur ligase, C-terminal domain superfamily BED33_00595 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal BED33_00595 IPR028343 Fructose-1,6-bisphosphatase BED33_00595 IPR020548 Fructose-1,6-bisphosphatase, active site BED33_00595 IPR000146 Fructose-1,6-bisphosphatase class 1 BED33_00600 IPR004090 Chemotaxis methyl-accepting receptor BED33_00600 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BED33_00600 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding BED33_00600 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily BED33_00600 IPR003660 HAMP domain BED33_00600 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site BED33_00605 IPR036649 Inorganic pyrophosphatase superfamily BED33_00605 IPR008162 Inorganic pyrophosphatase BED33_00610 IPR039126 Gamma-glutamylaminecyclotransferase BED33_00610 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like BED33_00610 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily BED33_00610 IPR013024 Gamma-glutamyl cyclotransferase-like BED33_00615 IPR007452 Translocation and assembly module TamB BED33_00620 IPR035243 TamA, POTRA domain 1 BED33_00620 IPR034746 POTRA domain BED33_00620 IPR039910 Surface antigen D15-like BED33_00620 IPR010827 POTRA domain, BamA/TamA-like BED33_00620 IPR000184 Bacterial surface antigen (D15) BED33_00625 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily BED33_00625 IPR002569 Peptide methionine sulphoxide reductase MsrA BED33_00630 IPR005170 Transporter-associated domain BED33_00630 IPR002550 CNNM, transmembrane domain BED33_00630 IPR036318 FAD-binding, type PCMH-like superfamily BED33_00630 IPR000644 CBS domain BED33_00630 IPR016169 FAD-binding, type PCMH, subdomain 2 BED33_00635 IPR009491 Protein of unknown function DUF1107 BED33_00640 IPR006513 Conserved hypothetical protein CHP01626, YtfJ BED33_00645 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ BED33_00645 IPR020583 Inositol monophosphatase, metal-binding site BED33_00645 IPR000760 Inositol monophosphatase-like BED33_00645 IPR020550 Inositol monophosphatase, conserved site BED33_00650 IPR008334 5'-Nucleotidase, C-terminal BED33_00650 IPR036907 5'-Nucleotidase, C-terminal domain superfamily BED33_00650 IPR006146 5'-Nucleotidase, conserved site BED33_00650 IPR006179 5'-Nucleotidase/apyrase BED33_00650 IPR029052 Metallo-dependent phosphatase-like BED33_00650 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase BED33_00650 IPR041827 CpdB, N-terminal metallophosphatase domain BED33_00650 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type BED33_00660 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily BED33_00660 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal BED33_00660 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain BED33_00665 IPR007340 Opacity-associated protein A BED33_00665 IPR013731 Opacity-associated protein A, N-terminal BED33_00675 IPR000244 Ribosomal protein L9 BED33_00675 IPR009027 Ribosomal protein L9/RNase H1, N-terminal BED33_00675 IPR020594 Ribosomal protein L9, bacteria/chloroplast BED33_00675 IPR020069 Ribosomal protein L9, C-terminal BED33_00675 IPR036935 Ribosomal protein L9, N-terminal domain superfamily BED33_00675 IPR020070 Ribosomal protein L9, N-terminal BED33_00675 IPR036791 Ribosomal protein L9, C-terminal domain superfamily BED33_00680 IPR036870 Ribosomal protein S18 superfamily BED33_00680 IPR018275 Ribosomal protein S18, conserved site BED33_00680 IPR001648 Ribosomal protein S18 BED33_00685 IPR023646 Primosomal replication protein PriB BED33_00685 IPR000424 Primosome PriB/single-strand DNA-binding BED33_00685 IPR012340 Nucleic acid-binding, OB-fold BED33_00690 IPR020815 Ribosomal protein S6, conserved site BED33_00690 IPR000529 Ribosomal protein S6 BED33_00690 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 BED33_00690 IPR035980 Ribosomal protein S6 superfamily BED33_00690 IPR020814 Ribosomal protein S6, plastid/chloroplast BED33_00700 IPR029058 Alpha/Beta hydrolase fold BED33_00700 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain BED33_00705 IPR036275 YdgH-like superfamily BED33_00705 IPR010854 Domain of unknown function DUF1471 BED33_00705 IPR025543 Dodecin-like BED33_00710 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal BED33_00710 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal BED33_00710 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily BED33_00710 IPR034184 Putative acyl-CoA dehydrogenase AidB BED33_00710 IPR041504 Adaptive response protein AidB, N-terminal BED33_00710 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain BED33_00710 IPR006089 Acyl-CoA dehydrogenase, conserved site BED33_00715 IPR003346 Transposase, IS116/IS110/IS902 BED33_00715 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED33_00720 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BED33_00720 IPR013123 RNA 2-O ribose methyltransferase, substrate binding BED33_00720 IPR001537 tRNA/rRNA methyltransferase, SpoU type BED33_00720 IPR004441 RNA methyltransferase TrmH family BED33_00720 IPR029064 50S ribosomal protein L30e-like BED33_00720 IPR029028 Alpha/beta knot methyltransferases BED33_00720 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB BED33_00725 IPR001900 Ribonuclease II/R BED33_00725 IPR003029 S1 domain BED33_00725 IPR022967 RNA-binding domain, S1 BED33_00725 IPR013223 Ribonuclease B, N-terminal OB domain BED33_00725 IPR011805 Ribonuclease R BED33_00725 IPR013668 Ribonuclease R winged-helix domain BED33_00725 IPR011129 Cold shock domain BED33_00725 IPR012340 Nucleic acid-binding, OB-fold BED33_00725 IPR040476 RNase II/RNase R, cold shock domain BED33_00725 IPR022966 Ribonuclease II/R, conserved site BED33_00725 IPR004476 Ribonuclease II/ribonuclease R BED33_00730 IPR023761 Transcriptional repressor HTH, NsrR BED33_00730 IPR036390 Winged helix DNA-binding domain superfamily BED33_00730 IPR000944 Transcription regulator Rrf2-type BED33_00730 IPR030489 Transcription regulator Rrf2-type, conserved site BED33_00730 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_00735 IPR018220 Adenylosuccinate synthase, GTP-binding site BED33_00735 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_00735 IPR001114 Adenylosuccinate synthetase BED33_00735 IPR042111 Adenylosuccinate synthetase, domain 3 BED33_00735 IPR042110 Adenylosuccinate synthetase, domain 2 BED33_00735 IPR042109 Adenylosuccinate synthetase, domain 1 BED33_00735 IPR033128 Adenylosuccinate synthase, active site BED33_00740 IPR019201 Protein of unknown function DUF2065 BED33_00745 IPR010200 HflC BED33_00745 IPR001107 Band 7 domain BED33_00745 IPR036013 Band 7/SPFH domain superfamily BED33_00750 IPR001972 Stomatin family BED33_00750 IPR001107 Band 7 domain BED33_00750 IPR036013 Band 7/SPFH domain superfamily BED33_00750 IPR010201 HflK BED33_00750 IPR020980 Menbrane protein HflK, N-terminal BED33_00755 IPR042108 GTPase HflX, N-terminal domain superfamily BED33_00755 IPR025121 GTPase HflX, N-terminal BED33_00755 IPR016496 GTPase HflX BED33_00755 IPR006073 GTP binding domain BED33_00755 IPR032305 GTP-binding protein, middle domain BED33_00755 IPR035647 EF-G domain III/V-like BED33_00755 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_00755 IPR030394 HflX-type guanine nucleotide-binding (G) domain BED33_00760 IPR005001 RNA-binding protein Hfq BED33_00760 IPR010920 LSM domain superfamily BED33_00765 IPR018022 IPP transferase BED33_00765 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_00765 IPR039657 Dimethylallyltransferase BED33_00770 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BED33_00770 IPR020568 Ribosomal protein S5 domain 2-type fold BED33_00770 IPR037198 MutL, C-terminal domain superfamily BED33_00770 IPR042121 MutL, C-terminal domain, regulatory subdomain BED33_00770 IPR014790 MutL, C-terminal, dimerisation BED33_00770 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms BED33_00770 IPR042120 MutL, C-terminal domain, dimerisation subdomain BED33_00770 IPR013507 DNA mismatch repair protein, S5 domain 2-like BED33_00770 IPR002099 DNA mismatch repair protein family, N-terminal BED33_00770 IPR020667 DNA mismatch repair protein, MutL BED33_00770 IPR014762 DNA mismatch repair, conserved site BED33_00770 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BED33_00775 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain BED33_00780 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE BED33_00780 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_00785 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase BED33_00785 IPR017953 Carbohydrate kinase, predicted, conserved site BED33_00785 IPR029056 Ribokinase-like BED33_00785 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr BED33_00785 IPR036652 YjeF N-terminal domain superfamily BED33_00785 IPR004443 YjeF N-terminal domain BED33_00790 IPR009051 Alpha-helical ferredoxin BED33_00790 IPR004453 Epoxyqueuosine reductase QueG BED33_00790 IPR013542 Domain of unknown function DUF1730 BED33_00790 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BED33_00790 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BED33_00805 IPR013520 Exonuclease, RNase T/DNA polymerase III BED33_00805 IPR022894 Oligoribonuclease BED33_00805 IPR012337 Ribonuclease H-like superfamily BED33_00805 IPR036397 Ribonuclease H superfamily BED33_00810 IPR004881 Ribosome biogenesis GTPase RsgA BED33_00810 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_00810 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain BED33_00810 IPR010914 RsgA GTPase domain BED33_00815 IPR003817 Phosphatidylserine decarboxylase-related BED33_00815 IPR033177 Phosphatidylserine decarboxylase BED33_00815 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 BED33_00820 IPR006685 Mechanosensitive ion channel MscS BED33_00820 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 BED33_00820 IPR023408 Mechanosensitive ion channel MscS domain superfamily BED33_00820 IPR025692 Mechanosensitive ion channel inner membrane domain 1 BED33_00820 IPR006686 Mechanosensitive ion channel MscS, conserved site BED33_00820 IPR010920 LSM domain superfamily BED33_00820 IPR024393 Mechanosensitive ion channel MscS, porin domain BED33_00820 IPR011066 Mechanosensitive ion channel MscS, C-terminal BED33_00825 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal BED33_00825 IPR004525 Elongation factor P--(R)-beta-lysine ligase BED33_00825 IPR006195 Aminoacyl-tRNA synthetase, class II BED33_00825 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) BED33_00830 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site BED33_00830 IPR005884 Fumarate reductase, flavoprotein subunit BED33_00830 IPR036188 FAD/NAD(P)-binding domain superfamily BED33_00830 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily BED33_00830 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit BED33_00830 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain BED33_00830 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal BED33_00830 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily BED33_00835 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal BED33_00835 IPR009051 Alpha-helical ferredoxin BED33_00835 IPR012675 Beta-grasp domain superfamily BED33_00835 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BED33_00835 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BED33_00835 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain BED33_00835 IPR036010 2Fe-2S ferredoxin-like superfamily BED33_00835 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site BED33_00835 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein BED33_00840 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit BED33_00840 IPR003510 Fumarate reductase, subunit C BED33_00845 IPR003418 Fumarate reductase, subunit D BED33_00845 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit BED33_00850 IPR000566 Lipocalin/cytosolic fatty-acid binding domain BED33_00850 IPR022272 Lipocalin family conserved site BED33_00850 IPR002446 Lipocalin, bacterial BED33_00850 IPR022271 Lipocalin, ApoD type BED33_00850 IPR012674 Calycin BED33_00855 IPR000390 Small multidrug resistance protein family BED33_00860 IPR012556 Entericidin A/B BED33_00865 IPR008991 Translation protein SH3-like domain superfamily BED33_00865 IPR011768 Translation elongation factor P BED33_00865 IPR012340 Nucleic acid-binding, OB-fold BED33_00865 IPR013852 Translation elongation factor P/YeiP, conserved site BED33_00865 IPR014722 Ribosomal protein L2, domain 2 BED33_00865 IPR020599 Translation elongation factor P/YeiP BED33_00865 IPR013185 Translation elongation factor, KOW-like BED33_00865 IPR001059 Translation elongation factor P/YeiP, central BED33_00865 IPR015365 Elongation factor P, C-terminal BED33_00870 IPR013785 Aldolase-type TIM barrel BED33_00870 IPR007197 Radical SAM BED33_00870 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase BED33_00870 IPR022462 Lysine-2,3-aminomutase-like BED33_00875 IPR025294 Protein of unknown function DUF4156 BED33_00885 IPR018370 Chaperonin Cpn60, conserved site BED33_00885 IPR001844 Chaperonin Cpn60 BED33_00885 IPR002423 Chaperonin Cpn60/TCP-1 family BED33_00885 IPR027409 GroEL-like apical domain superfamily BED33_00885 IPR027413 GroEL-like equatorial domain superfamily BED33_00885 IPR027410 TCP-1-like chaperonin intermediate domain superfamily BED33_00890 IPR020818 GroES chaperonin family BED33_00890 IPR037124 GroES chaperonin superfamily BED33_00890 IPR018369 Chaperonin GroES, conserved site BED33_00890 IPR011032 GroES-like superfamily BED33_00895 IPR007313 FxsA cytoplasmic membrane protein BED33_00900 IPR024083 Fumarase/histidase, N-terminal BED33_00900 IPR018951 Fumarase C, C-terminal BED33_00900 IPR020557 Fumarate lyase, conserved site BED33_00900 IPR000362 Fumarate lyase family BED33_00900 IPR022761 Fumarate lyase, N-terminal BED33_00900 IPR008948 L-Aspartase-like BED33_00900 IPR004708 Aspartate ammonia-lyase BED33_00905 IPR004668 Anaerobic c4-dicarboxylate membrane transporter BED33_00910 IPR023700 Divalent cation tolerance protein CutA, Enterobacteria BED33_00910 IPR004323 Divalent ion tolerance protein, CutA BED33_00910 IPR011322 Nitrogen regulatory PII-like, alpha/beta BED33_00910 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BED33_00915 IPR003834 Cytochrome C biogenesis protein, transmembrane domain BED33_00915 IPR013766 Thioredoxin domain BED33_00915 IPR017937 Thioredoxin, conserved site BED33_00915 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily BED33_00915 IPR022910 Thiol:disulphide interchange protein DsbD BED33_00915 IPR036249 Thioredoxin-like superfamily BED33_00915 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain BED33_00915 IPR035671 DsbD gamma BED33_00920 IPR018197 Glycerate kinase, restriction-enzyme-like fold BED33_00920 IPR004381 Glycerate kinase BED33_00920 IPR018193 Glycerate kinase, flavodoxin-like fold BED33_00920 IPR036129 Glycerate kinase superfamily BED33_00925 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BED33_00925 IPR009057 Homeobox-like domain superfamily BED33_00925 IPR001647 DNA-binding HTH domain, TetR-type BED33_00935 IPR004184 Pyruvate formate lyase domain BED33_00935 IPR001150 Glycine radical domain BED33_00935 IPR005949 Formate acetyltransferase BED33_00935 IPR019777 Formate C-acetyltransferase glycine radical, conserved site BED33_00940 IPR004372 Acetate/propionate kinase BED33_00940 IPR000890 Aliphatic acid kinase, short-chain BED33_00940 IPR023865 Aliphatic acid kinase, short-chain, conserved site BED33_00940 IPR024917 Propionate kinase BED33_00945 IPR013057 Amino acid transporter, transmembrane domain BED33_00945 IPR004694 Hydroxy amino acid transporter BED33_00945 IPR023726 Threonine/serine transporter TdcC BED33_00950 IPR001926 Pyridoxal-phosphate dependent enzyme BED33_00950 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site BED33_00950 IPR005789 Threonine dehydratase, catabolic BED33_00950 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BED33_00955 IPR023404 Radical SAM, alpha/beta horseshoe BED33_00955 IPR007197 Radical SAM BED33_00955 IPR026332 Anaerobilin synthase HutW BED33_00955 IPR034505 Anaerobic coproporphyrinogen-III oxidase BED33_00955 IPR006638 Elp3/MiaB/NifB BED33_00960 IPR010413 Intracellular heme transport protein HutX-like BED33_00970 IPR019600 Hemin uptake protein HemP BED33_00975 IPR037066 TonB-dependent receptor, plug domain superfamily BED33_00975 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BED33_00975 IPR000531 TonB-dependent receptor-like, beta-barrel BED33_00975 IPR010916 TonB box, conserved site BED33_00975 IPR039426 Vitamin B12 transporter BtuB-like BED33_00975 IPR012910 TonB-dependent receptor, plug domain BED33_00975 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor BED33_00975 IPR011276 TonB-dependent haem/haemoglobin receptor BED33_00980 IPR007845 Haemin-degrading HemS/ChuX domain BED33_00985 IPR002491 ABC transporter periplasmic binding domain BED33_00990 IPR037294 ABC transporter, BtuC-like BED33_00990 IPR000522 ABC transporter, permease protein, BtuC-like BED33_00995 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_00995 IPR003593 AAA+ ATPase domain BED33_00995 IPR017871 ABC transporter, conserved site BED33_00995 IPR003439 ABC transporter-like BED33_00995 IPR015863 ABC transporter, hemin import, HmuV BED33_01010 IPR010917 TonB-dependent receptor, conserved site BED33_01010 IPR000531 TonB-dependent receptor-like, beta-barrel BED33_01010 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BED33_01010 IPR039423 TonB-dependent receptor-like BED33_01010 IPR037066 TonB-dependent receptor, plug domain superfamily BED33_01010 IPR010105 TonB-dependent siderophore receptor BED33_01010 IPR012910 TonB-dependent receptor, plug domain BED33_01025 IPR036165 YefM-like superfamily BED33_01025 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM BED33_01035 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_01035 IPR017871 ABC transporter, conserved site BED33_01035 IPR003439 ABC transporter-like BED33_01035 IPR036640 ABC transporter type 1, transmembrane domain superfamily BED33_01035 IPR011527 ABC transporter type 1, transmembrane domain BED33_01035 IPR003593 AAA+ ATPase domain BED33_01040 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BED33_01040 IPR012910 TonB-dependent receptor, plug domain BED33_01040 IPR037066 TonB-dependent receptor, plug domain superfamily BED33_01045 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component BED33_01045 IPR032623 FecR, N-terminal BED33_01045 IPR006860 FecR protein BED33_01060 IPR001455 TusA-like domain BED33_01060 IPR036868 TusA-like domain superfamily BED33_01065 IPR007272 Sulphur transport domain BED33_01070 IPR029025 Type III secretion system substrate exporter, C-terminal BED33_01070 IPR006307 Type III exporter system, secretion apparatus protein BsaZ BED33_01070 IPR006135 Type III secretion system substrate exporter BED33_01075 IPR002010 Type III secretion system inner membrane R protein BED33_01075 IPR006304 Type III secretion protein SpaR/YscT BED33_01080 IPR006306 Type III secretion protein HrpO BED33_01080 IPR002191 Bacterial export protein family 3 BED33_01085 IPR005838 Type III secretion system inner membrane P protein BED33_01085 IPR005773 Yop virulence translocation protein R BED33_01090 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb BED33_01090 IPR001543 Surface presentation of antigen (SpoA) BED33_01090 IPR036429 SpoA-like superfamily BED33_01090 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO BED33_01110 IPR006302 Type III secretion protein HrcV BED33_01110 IPR042193 FHIPEP, domain 3 BED33_01110 IPR025505 FHIPEP conserved site BED33_01110 IPR042196 FHIPEP, domain 4 BED33_01110 IPR001712 Type III secretion system FHIPEP BED33_01115 IPR017033 Type III secretion system apparatus protein SsaM BED33_01120 IPR013351 Type III secretion system effector delivery regulator TyeA-related BED33_01120 IPR010812 Hypersensitivity response secretion-like, HrpJ BED33_01135 IPR006182 Secretory protein YscJ/FliF BED33_01135 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ BED33_01155 IPR018062 HTH domain AraC-type, conserved site BED33_01155 IPR018060 DNA binding HTH domain, AraC-type BED33_01155 IPR009057 Homeobox-like domain superfamily BED33_01155 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like BED33_01180 IPR006972 Secretion system effector C, SseC-like BED33_01225 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_01225 IPR011006 CheY-like superfamily BED33_01225 IPR016032 Signal transduction response regulator, C-terminal effector BED33_01225 IPR000792 Transcription regulator LuxR, C-terminal BED33_01225 IPR001789 Signal transduction response regulator, receiver domain BED33_01230 IPR036458 Sodium:dicarboxylate symporter superfamily BED33_01230 IPR018107 Sodium:dicarboxylate symporter, conserved site BED33_01230 IPR034703 Proton/glutamate-aspartate symporter GltP BED33_01230 IPR033380 Glutamate-aspartate symport protein GltP/GltT BED33_01230 IPR001991 Sodium:dicarboxylate symporter BED33_01235 IPR025110 AMP-binding enzyme, C-terminal domain BED33_01235 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain BED33_01235 IPR011904 Acetate-CoA ligase BED33_01235 IPR020845 AMP-binding, conserved site BED33_01235 IPR000873 AMP-dependent synthetase/ligase BED33_01235 IPR042099 AMP-dependent synthetase-like superfamily BED33_01240 IPR007436 Protein of unknown function DUF485 BED33_01245 IPR001734 Sodium/solute symporter BED33_01245 IPR038377 Sodium/glucose symporter superfamily BED33_01245 IPR018212 Sodium/solute symporter, conserved site BED33_01245 IPR014083 Cation/acetate symporter ActP BED33_01290 IPR011607 Methylglyoxal synthase-like domain BED33_01290 IPR002695 Bifunctional purine biosynthesis protein PurH-like BED33_01290 IPR024051 AICAR transformylase, duplicated domain superfamily BED33_01290 IPR036914 Methylglyoxal synthase-like domain superfamily BED33_01290 IPR016193 Cytidine deaminase-like BED33_01295 IPR011761 ATP-grasp fold BED33_01295 IPR013815 ATP-grasp fold, subdomain 1 BED33_01295 IPR016185 Pre-ATP-grasp domain superfamily BED33_01295 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BED33_01295 IPR000115 Phosphoribosylglycinamide synthetase BED33_01295 IPR020560 Phosphoribosylglycinamide synthetase, C-domain BED33_01295 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal BED33_01295 IPR011054 Rudiment single hybrid motif BED33_01295 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily BED33_01295 IPR020559 Phosphoribosylglycinamide synthetase, conserved site BED33_01300 IPR010858 Protein of unknown function DUF1481 BED33_01300 IPR016500 Uncharacterised conserved protein UCP006993 BED33_01305 IPR020816 Histone-like DNA-binding protein, conserved site BED33_01305 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily BED33_01305 IPR000119 Histone-like DNA-binding protein BED33_01310 IPR023381 YP001051499.1-like domain superfamily BED33_01310 IPR007338 Protein of unknown function DUF416 BED33_01315 IPR007581 Endonuclease V BED33_01320 IPR000257 Uroporphyrinogen decarboxylase (URO-D) BED33_01320 IPR006361 Uroporphyrinogen decarboxylase HemE BED33_01320 IPR038071 UROD/MetE-like superfamily BED33_01325 IPR000086 NUDIX hydrolase domain BED33_01325 IPR015376 Zinc ribbon, NADH pyrophosphatase BED33_01325 IPR022925 NADH pyrophosphatase NudC BED33_01325 IPR020084 NUDIX hydrolase, conserved site BED33_01325 IPR015797 NUDIX hydrolase-like domain superfamily BED33_01330 IPR038309 Rsd/AlgQ superfamily BED33_01330 IPR023785 Regulator of RNA polymerase sigma(70) subunit, Rsd BED33_01330 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ BED33_01335 IPR038521 ThiC/Bza superfamily BED33_01335 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B BED33_01335 IPR025747 ThiC-associated domain BED33_01335 IPR037509 Phosphomethylpyrimidine synthase BED33_01340 IPR013785 Aldolase-type TIM barrel BED33_01340 IPR034291 Thiamine phosphate synthase BED33_01340 IPR022998 Thiamine phosphate synthase/TenI BED33_01340 IPR036206 Thiamin phosphate synthase superfamily BED33_01345 IPR012731 Thiazole biosynthesis adenylyltransferase ThiF BED33_01345 IPR035985 Ubiquitin-activating enzyme BED33_01345 IPR000594 THIF-type NAD/FAD binding fold BED33_01350 IPR003749 Sulfur carrier ThiS/MoaD-like BED33_01350 IPR010035 ThiS, thiamine-biosynthesis BED33_01350 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp BED33_01350 IPR012675 Beta-grasp domain superfamily BED33_01355 IPR013785 Aldolase-type TIM barrel BED33_01355 IPR033983 Thiazole synthase ThiG BED33_01355 IPR008867 Thiazole synthase BED33_01360 IPR007197 Radical SAM BED33_01360 IPR013785 Aldolase-type TIM barrel BED33_01360 IPR012726 Thiazole biosynthesis ThiH BED33_01360 IPR010722 Biotin and thiamin synthesis-associated domain BED33_01360 IPR034428 ThiH/NocL/HydG-like BED33_01365 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED33_01365 IPR003346 Transposase, IS116/IS110/IS902 BED33_01370 IPR007080 RNA polymerase Rpb1, domain 1 BED33_01370 IPR012754 DNA-directed RNA polymerase, subunit beta-prime BED33_01370 IPR006592 RNA polymerase, N-terminal BED33_01370 IPR007083 RNA polymerase Rpb1, domain 4 BED33_01370 IPR038120 RNA polymerase Rpb1, funnel domain superfamily BED33_01370 IPR042102 RNA polymerase Rpb1, domain 3 superfamily BED33_01370 IPR007066 RNA polymerase Rpb1, domain 3 BED33_01370 IPR000722 RNA polymerase, alpha subunit BED33_01370 IPR007081 RNA polymerase Rpb1, domain 5 BED33_01375 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain BED33_01375 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain BED33_01375 IPR007645 RNA polymerase Rpb2, domain 3 BED33_01375 IPR037034 RNA polymerase Rpb2, domain 2 superfamily BED33_01375 IPR007642 RNA polymerase Rpb2, domain 2 BED33_01375 IPR007644 RNA polymerase, beta subunit, protrusion BED33_01375 IPR007641 RNA polymerase Rpb2, domain 7 BED33_01375 IPR014724 RNA polymerase Rpb2, OB-fold BED33_01375 IPR007121 RNA polymerase, beta subunit, conserved site BED33_01375 IPR015712 DNA-directed RNA polymerase, subunit 2 BED33_01375 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily BED33_01375 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type BED33_01380 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like BED33_01380 IPR000206 Ribosomal protein L7/L12 BED33_01380 IPR013823 Ribosomal protein L7/L12, C-terminal BED33_01380 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily BED33_01380 IPR008932 Ribosomal protein L7/L12, oligomerisation BED33_01385 IPR001790 Ribosomal protein L10P BED33_01385 IPR002363 Ribosomal protein L10, eubacterial, conserved site BED33_01385 IPR022973 Ribosomal protein L10 BED33_01390 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein BED33_01390 IPR023674 Ribosomal protein L1-like BED33_01390 IPR002143 Ribosomal protein L1 BED33_01390 IPR005878 Ribosomal protein L1, bacterial-type BED33_01390 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich BED33_01390 IPR023673 Ribosomal protein L1, conserved site BED33_01395 IPR020785 Ribosomal protein L11, conserved site BED33_01395 IPR036769 Ribosomal protein L11, C-terminal domain superfamily BED33_01395 IPR000911 Ribosomal protein L11/L12 BED33_01395 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily BED33_01395 IPR006519 Ribosomal protein L11, bacterial-type BED33_01395 IPR020784 Ribosomal protein L11, N-terminal BED33_01395 IPR020783 Ribosomal protein L11, C-terminal BED33_01400 IPR008991 Translation protein SH3-like domain superfamily BED33_01400 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site BED33_01400 IPR001062 Transcription antitermination protein, NusG BED33_01400 IPR014722 Ribosomal protein L2, domain 2 BED33_01400 IPR036735 NusG, N-terminal domain superfamily BED33_01400 IPR006645 NusG, N-terminal BED33_01400 IPR005824 KOW BED33_01405 IPR005807 SecE subunit of protein translocation complex, bacterial-like BED33_01405 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit BED33_01405 IPR038379 SecE superfamily BED33_01410 IPR004161 Translation elongation factor EFTu-like, domain 2 BED33_01410 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal BED33_01410 IPR009000 Translation protein, beta-barrel domain superfamily BED33_01410 IPR000795 Transcription factor, GTP-binding domain BED33_01410 IPR005225 Small GTP-binding protein domain BED33_01410 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_01410 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain BED33_01410 IPR031157 Tr-type G domain, conserved site BED33_01410 IPR033720 Elongation factor Tu, domain 2 BED33_01410 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal BED33_01410 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle BED33_01445 IPR006083 Phosphoribulokinase/uridine kinase BED33_01445 IPR004566 Pantothenate kinase BED33_01445 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_01450 IPR030855 Bifunctional ligase/repressor BirA BED33_01450 IPR004408 Biotin--acetyl-CoA-carboxylase ligase BED33_01450 IPR004409 Biotin operon repressor, helix-turn-helix domain BED33_01450 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain BED33_01450 IPR013196 Helix-turn-helix, type 11 BED33_01450 IPR008988 Transcriptional repressor, C-terminal BED33_01450 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_01450 IPR036390 Winged helix DNA-binding domain superfamily BED33_01450 IPR003142 Biotin protein ligase, C-terminal BED33_01455 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase BED33_01455 IPR016169 FAD-binding, type PCMH, subdomain 2 BED33_01455 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal BED33_01455 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily BED33_01455 IPR036318 FAD-binding, type PCMH-like superfamily BED33_01455 IPR006094 FAD linked oxidase, N-terminal BED33_01455 IPR016167 FAD-binding, type PCMH, subdomain 1 BED33_01455 IPR016166 FAD-binding domain, PCMH-type BED33_01460 IPR003346 Transposase, IS116/IS110/IS902 BED33_01460 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED33_01490 IPR029039 Flavoprotein-like superfamily BED33_01490 IPR001226 Flavodoxin, conserved site BED33_01490 IPR026816 Flavodoxin domain BED33_01490 IPR008254 Flavodoxin/nitric oxide synthase BED33_01495 IPR004772 TrkH potassium transport family BED33_01495 IPR003445 Cation transporter BED33_01500 IPR023582 Impact family BED33_01500 IPR035647 EF-G domain III/V-like BED33_01500 IPR015796 Impact family, bacterial/archaeal BED33_01500 IPR036956 Impact, N-terminal domain superfamily BED33_01500 IPR020568 Ribosomal protein S5 domain 2-type fold BED33_01500 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal BED33_01500 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site BED33_01500 IPR001498 Impact, N-terminal BED33_01505 IPR022846 Xaa-Pro dipeptidase BED33_01505 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site BED33_01505 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal BED33_01505 IPR036005 Creatinase/aminopeptidase-like BED33_01505 IPR000994 Peptidase M24 BED33_01510 IPR036291 NAD(P)-binding domain superfamily BED33_01510 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site BED33_01510 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding BED33_01510 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal BED33_01510 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site BED33_01510 IPR029045 ClpP/crotonase-like domain superfamily BED33_01510 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BED33_01510 IPR001753 Enoyl-CoA hydratase/isomerase BED33_01510 IPR012799 Fatty oxidation complex, alpha subunit FadB BED33_01515 IPR020616 Thiolase, N-terminal BED33_01515 IPR012805 Acetyl-CoA C-acyltransferase FadA BED33_01515 IPR020613 Thiolase, conserved site BED33_01515 IPR020610 Thiolase, active site BED33_01515 IPR020617 Thiolase, C-terminal BED33_01515 IPR002155 Thiolase BED33_01515 IPR020615 Thiolase, acyl-enzyme intermediate active site BED33_01515 IPR016039 Thiolase-like BED33_01520 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BED33_01520 IPR017927 FAD-binding domain, ferredoxin reductase-type BED33_01520 IPR017938 Riboflavin synthase-like beta-barrel BED33_01520 IPR001433 Oxidoreductase FAD/NAD(P)-binding BED33_01520 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain BED33_01525 IPR023677 UbiD decarboxylyase, bacteria BED33_01525 IPR002830 UbiD decarboxylyase family BED33_01530 IPR036735 NusG, N-terminal domain superfamily BED33_01530 IPR010215 Transcription antitermination protein RfaH BED33_01530 IPR006645 NusG, N-terminal BED33_01535 IPR001731 Delta-aminolevulinic acid dehydratase BED33_01535 IPR030656 Delta-aminolevulinic acid dehydratase, active site BED33_01535 IPR013785 Aldolase-type TIM barrel BED33_01540 IPR024918 3'-5' ssDNA/RNA exonuclease TatD BED33_01540 IPR032466 Metal-dependent hydrolase BED33_01540 IPR001130 TatD family BED33_01540 IPR018228 Deoxyribonuclease, TatD-related, conserved site BED33_01545 IPR019820 Sec-independent periplasmic protein translocase, conserved site BED33_01545 IPR002033 Sec-independent periplasmic protein translocase TatC BED33_01550 IPR018448 Twin-arginine translocation protein TatB BED33_01555 IPR006312 Sec-independent protein translocase protein TatA/E BED33_01555 IPR003369 Sec-independent protein translocase protein TatA/B/E BED33_01560 IPR010232 Probable protein kinase UbiB BED33_01560 IPR011009 Protein kinase-like domain superfamily BED33_01560 IPR004147 UbiB domain BED33_01565 IPR003033 SCP2 sterol-binding domain BED33_01565 IPR036527 SCP2 sterol-binding domain superfamily BED33_01565 IPR038989 Ubiquinone biosynthesis protein UbiJ BED33_01570 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED33_01570 IPR023576 UbiE/COQ5 methyltransferase, conserved site BED33_01570 IPR004033 UbiE/COQ5 methyltransferase BED33_01585 IPR025299 CstA, C-terminal domain BED33_01585 IPR003706 CstA, N-terminal domain BED33_01595 IPR018016 Nucleoside phosphorylase, conserved site BED33_01595 IPR010058 Uridine phosphorylase BED33_01595 IPR035994 Nucleoside phosphorylase superfamily BED33_01595 IPR000845 Nucleoside phosphorylase domain BED33_01600 IPR029058 Alpha/Beta hydrolase fold BED33_01600 IPR002925 Dienelactone hydrolase BED33_01605 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal BED33_01605 IPR006276 Cobalamin-independent methionine synthase BED33_01605 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal BED33_01605 IPR038071 UROD/MetE-like superfamily BED33_01610 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_01610 IPR000847 Transcription regulator HTH, LysR BED33_01610 IPR037406 HTH-type transcriptional regulator MetR, PBP2 domain BED33_01610 IPR005119 LysR, substrate-binding BED33_01610 IPR036390 Winged helix DNA-binding domain superfamily BED33_01615 IPR000620 EamA domain BED33_01615 IPR004779 Carboxylate/Amino Acid/Amine Transporter BED33_01620 IPR004776 Membrane transport protein BED33_01625 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily BED33_01625 IPR030395 Glycerophosphodiester phosphodiesterase domain BED33_01630 IPR017922 sn-Glycerol-3-phosphate import ATP-binding protein UgpC BED33_01630 IPR003593 AAA+ ATPase domain BED33_01630 IPR003439 ABC transporter-like BED33_01630 IPR017871 ABC transporter, conserved site BED33_01630 IPR008995 Molybdate/tungstate binding, C-terminal BED33_01630 IPR040582 MalK, OB fold domain BED33_01630 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_01635 IPR030165 sn-Glycerol-3-phosphate transport system permease protein UgpE BED33_01635 IPR035906 MetI-like superfamily BED33_01635 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED33_01640 IPR035906 MetI-like superfamily BED33_01640 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED33_01645 IPR006059 Bacterial extracellular solute-binding protein BED33_01645 IPR006061 Solute-binding family 1, conserved site BED33_01680 IPR003593 AAA+ ATPase domain BED33_01680 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_01680 IPR003439 ABC transporter-like BED33_01680 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein BED33_01680 IPR017871 ABC transporter, conserved site BED33_01685 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal BED33_01685 IPR017871 ABC transporter, conserved site BED33_01685 IPR003439 ABC transporter-like BED33_01685 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_01685 IPR003593 AAA+ ATPase domain BED33_01690 IPR001851 ABC transporter, permease BED33_01690 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal BED33_01695 IPR001851 ABC transporter, permease BED33_01700 IPR000709 Leu/Ile/Val-binding protein BED33_01700 IPR028082 Periplasmic binding protein-like I BED33_01700 IPR028081 Leucine-binding protein domain BED33_01705 IPR040448 PanZ, acetyltransferase (GNAT) domain BED33_01705 IPR032900 PanD regulatory factor PanZ BED33_01705 IPR016181 Acyl-CoA N-acyltransferase BED33_01705 IPR000182 GNAT domain BED33_01720 IPR014284 RNA polymerase sigma-70 like domain BED33_01720 IPR000943 RNA polymerase sigma-70 BED33_01720 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_01720 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria BED33_01720 IPR009042 RNA polymerase sigma-70 region 1.2 BED33_01720 IPR007630 RNA polymerase sigma-70 region 4 BED33_01720 IPR007627 RNA polymerase sigma-70 region 2 BED33_01720 IPR013324 RNA polymerase sigma factor, region 3/4-like BED33_01720 IPR013325 RNA polymerase sigma factor, region 2 BED33_01725 IPR003838 ABC transporter permease protein domain BED33_01725 IPR004513 Cell division protein FtsX BED33_01725 IPR040690 FtsX, extracellular domain BED33_01730 IPR003439 ABC transporter-like BED33_01730 IPR017871 ABC transporter, conserved site BED33_01730 IPR005286 Cell division protein FtsE, ATP-binding BED33_01730 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_01730 IPR003593 AAA+ ATPase domain BED33_01735 IPR003593 AAA+ ATPase domain BED33_01735 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_01735 IPR013822 Signal recognition particle SRP54, helical bundle BED33_01735 IPR004390 Signal-recognition particle receptor FtsY BED33_01735 IPR036225 SRP/SRP receptor, N-terminal BED33_01735 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain BED33_01735 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily BED33_01740 IPR004398 RNA methyltransferase, RsmD BED33_01740 IPR002052 DNA methylase, N-6 adenine-specific, conserved site BED33_01740 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED33_01745 IPR009525 Protein of unknown function DUF1145 BED33_01760 IPR012506 YhhN-like BED33_01765 IPR006121 Heavy metal-associated domain, HMA BED33_01765 IPR027256 P-type ATPase, subfamily IB BED33_01765 IPR023214 HAD superfamily BED33_01765 IPR036412 HAD-like superfamily BED33_01765 IPR008250 P-type ATPase, A domain superfamily BED33_01765 IPR023298 P-type ATPase, transmembrane domain superfamily BED33_01765 IPR018303 P-type ATPase, phosphorylation site BED33_01765 IPR023299 P-type ATPase, cytoplasmic domain N BED33_01765 IPR001757 P-type ATPase BED33_01765 IPR036163 Heavy metal-associated domain superfamily BED33_01765 IPR017969 Heavy-metal-associated, conserved site BED33_01770 IPR001455 TusA-like domain BED33_01770 IPR022931 Sulfur carrier protein TusA BED33_01770 IPR036868 TusA-like domain superfamily BED33_01775 IPR003744 Queuosine precursor transporter BED33_01780 IPR014894 Protein DcrB BED33_01780 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich BED33_01785 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BED33_01785 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BED33_01785 IPR004017 Cysteine-rich domain BED33_01785 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit BED33_01785 IPR009051 Alpha-helical ferredoxin BED33_01790 IPR036188 FAD/NAD(P)-binding domain superfamily BED33_01790 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain BED33_01790 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit BED33_01795 IPR006076 FAD dependent oxidoreductase BED33_01795 IPR036188 FAD/NAD(P)-binding domain superfamily BED33_01795 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase BED33_01795 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily BED33_01795 IPR007419 BFD-like [2Fe-2S]-binding domain BED33_01795 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit BED33_01800 IPR020846 Major facilitator superfamily domain BED33_01800 IPR036259 MFS transporter superfamily BED33_01800 IPR011701 Major facilitator superfamily BED33_01800 IPR021159 Glycerate/sugar phosphate transporter, conserved site BED33_01800 IPR005267 Glycerol-3-phosphate transporter BED33_01800 IPR000849 Sugar phosphate transporter BED33_01805 IPR030395 Glycerophosphodiester phosphodiesterase domain BED33_01805 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily BED33_01810 IPR006379 HAD-superfamily hydrolase, subfamily IIB BED33_01810 IPR000150 Cof family BED33_01810 IPR023214 HAD superfamily BED33_01810 IPR036412 HAD-like superfamily BED33_01815 IPR029058 Alpha/Beta hydrolase fold BED33_01815 IPR022742 Serine aminopeptidase, S33 BED33_01820 IPR004778 Homoserine/Threonine efflux protein BED33_01820 IPR001123 Amino acid exporter protein, LeuE-type BED33_01825 IPR004778 Homoserine/Threonine efflux protein BED33_01825 IPR001123 Amino acid exporter protein, LeuE-type BED33_01830 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial BED33_01830 IPR001650 Helicase, C-terminal BED33_01830 IPR010997 HRDC-like superfamily BED33_01830 IPR004589 DNA helicase, ATP-dependent, RecQ type BED33_01830 IPR011545 DEAD/DEAH box helicase domain BED33_01830 IPR002121 HRDC domain BED33_01830 IPR014001 Helicase superfamily 1/2, ATP-binding domain BED33_01830 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_01830 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_01830 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain BED33_01830 IPR018982 RQC domain BED33_01835 IPR036541 Phospholipase A1 superfamily BED33_01835 IPR003187 Phospholipase A1 BED33_01840 IPR029069 HotDog domain superfamily BED33_01840 IPR006683 Thioesterase domain BED33_01840 IPR003736 Phenylacetic acid degradation-related domain BED33_01845 IPR000620 EamA domain BED33_01845 IPR004626 RarD protein BED33_01850 IPR004488 Magnesium/cobalt transport protein CorA BED33_01850 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB BED33_01855 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily BED33_01855 IPR009215 TIM-barrel domain, IGPS-like BED33_01855 IPR013785 Aldolase-type TIM barrel BED33_01860 IPR008322 Uncharacterised protein family UPF0261 BED33_01870 IPR014016 UvrD-like helicase, ATP-binding domain BED33_01870 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_01870 IPR000212 DNA helicase, UvrD/REP type BED33_01870 IPR014017 UvrD-like DNA helicase, C-terminal BED33_01870 IPR013986 DExx box DNA helicase domain superfamily BED33_01870 IPR034739 UvrD/AddA helicase, N-terminal BED33_01870 IPR005753 DNA helicase, ATP-dependent, UvrD type BED33_01875 IPR023214 HAD superfamily BED33_01875 IPR036412 HAD-like superfamily BED33_01875 IPR041492 Haloacid dehalogenase-like hydrolase BED33_01875 IPR006439 HAD hydrolase, subfamily IA BED33_01880 IPR023009 Tyrosine recombinase XerC/XerD BED33_01880 IPR011931 Tyrosine recombinase XerC BED33_01880 IPR004107 Integrase, SAM-like, N-terminal BED33_01880 IPR010998 Integrase/recombinase, N-terminal BED33_01880 IPR011010 DNA breaking-rejoining enzyme, catalytic core BED33_01880 IPR002104 Integrase, catalytic domain BED33_01880 IPR013762 Integrase-like, catalytic domain superfamily BED33_01885 IPR007435 Protein of unknown function DUF484 BED33_01885 IPR029016 GAF-like domain superfamily BED33_01890 IPR018510 Diaminopimelate epimerase, active site BED33_01890 IPR001653 Diaminopimelate epimerase, DapF BED33_01895 IPR032831 Prokaryotic lipoprotein-attachment site BED33_01900 IPR020895 Frataxin conserved site BED33_01900 IPR002908 Frataxin/CyaY BED33_01900 IPR036524 Frataxin/CyaY superfamily BED33_01910 IPR000274 Adenylate cyclase, class-I BED33_01910 IPR024686 Adenylate cyclase class-I, conserved site BED33_01910 IPR024685 Adenylate cyclase class-I, N-terminal domain BED33_01915 IPR000860 Porphobilinogen deaminase BED33_01915 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site BED33_01915 IPR022417 Porphobilinogen deaminase, N-terminal BED33_01915 IPR022418 Porphobilinogen deaminase, C-terminal BED33_01915 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily BED33_01920 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase BED33_01920 IPR039793 Uroporphyrinogen-III synthase BED33_01920 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily BED33_01925 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX BED33_01930 IPR013105 Tetratricopeptide repeat 2 BED33_01930 IPR011990 Tetratricopeptide-like helical domain superfamily BED33_01930 IPR013026 Tetratricopeptide repeat-containing domain BED33_01930 IPR010817 HemY, N-terminal BED33_01930 IPR005254 Heme biosynthesis-associated TPR protein BED33_01930 IPR019734 Tetratricopeptide repeat BED33_01935 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED33_01935 IPR003346 Transposase, IS116/IS110/IS902 BED33_01965 IPR023085 UDP-N-acetyl-D-mannosaminuronic acid transferase BED33_01965 IPR004629 Glycosyl transferase WecB/TagA/CpsF BED33_01970 IPR010691 Probable ECA polymerase WzyE BED33_01975 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase BED33_01980 IPR002797 Polysaccharide biosynthesis protein BED33_01980 IPR032896 Lipid III flippase WzxE BED33_01985 IPR012749 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE-like BED33_01985 IPR032894 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE BED33_01985 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED33_01985 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED33_01985 IPR015424 Pyridoxal phosphate-dependent transferase BED33_01985 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase BED33_01990 IPR012752 dTDP-fucosamine acetyltransferase WecD BED33_01990 IPR000182 GNAT domain BED33_01990 IPR020683 Ankyrin repeat-containing domain BED33_01990 IPR002110 Ankyrin repeat BED33_01990 IPR016181 Acyl-CoA N-acyltransferase BED33_01995 IPR029044 Nucleotide-diphospho-sugar transferases BED33_01995 IPR005835 Nucleotidyl transferase domain BED33_01995 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form BED33_02000 IPR005888 dTDP-glucose 4,6-dehydratase BED33_02000 IPR036291 NAD(P)-binding domain superfamily BED33_02000 IPR016040 NAD(P)-binding domain BED33_02005 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal BED33_02005 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation BED33_02005 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase BED33_02005 IPR032891 UDP-N-acetyl-D-mannosamine dehydrogenase WecC BED33_02005 IPR017476 UDP-glucose/GDP-mannose dehydrogenase BED33_02005 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal BED33_02005 IPR036291 NAD(P)-binding domain superfamily BED33_02005 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BED33_02005 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily BED33_02010 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like BED33_02010 IPR032892 UDP-N-acetylglucosamine 2-epimerase WecB BED33_02010 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain BED33_02015 IPR003856 Polysaccharide chain length determinant N-terminal domain BED33_02015 IPR032895 ECA polysaccharide chain length modulation protein WzzE BED33_02020 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase BED33_02020 IPR000715 Glycosyl transferase, family 4 BED33_02025 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED33_02025 IPR003346 Transposase, IS116/IS110/IS902 BED33_02030 IPR036269 Rho termination factor, N-terminal domain superfamily BED33_02030 IPR011112 Rho termination factor, N-terminal BED33_02030 IPR041703 Transcription termination factor Rho, ATP binding domain BED33_02030 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_02030 IPR012340 Nucleic acid-binding, OB-fold BED33_02030 IPR011113 Rho termination factor, RNA-binding domain BED33_02030 IPR004665 Transcription termination factor Rho BED33_02030 IPR011129 Cold shock domain BED33_02030 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain BED33_02030 IPR003593 AAA+ ATPase domain BED33_02035 IPR005746 Thioredoxin BED33_02035 IPR013766 Thioredoxin domain BED33_02035 IPR036249 Thioredoxin-like superfamily BED33_02035 IPR017937 Thioredoxin, conserved site BED33_02040 IPR011545 DEAD/DEAH box helicase domain BED33_02040 IPR014014 RNA helicase, DEAD-box type, Q motif BED33_02040 IPR023554 ATP-dependent RNA helicase RhlB type BED33_02040 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site BED33_02040 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_02040 IPR001650 Helicase, C-terminal BED33_02040 IPR014001 Helicase superfamily 1/2, ATP-binding domain BED33_02045 IPR022371 Exopolyphosphatase BED33_02045 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase BED33_02045 IPR003695 Ppx/GppA phosphatase BED33_02045 IPR030673 Pyrophosphatase, GppA/Ppx-type BED33_02050 IPR036116 Fibronectin type III superfamily BED33_02050 IPR011050 Pectin lyase fold/virulence factor BED33_02050 IPR003961 Fibronectin type III BED33_02050 IPR000743 Glycoside hydrolase, family 28 BED33_02050 IPR013783 Immunoglobulin-like fold BED33_02050 IPR012334 Pectin lyase fold BED33_02055 IPR000212 DNA helicase, UvrD/REP type BED33_02055 IPR005752 ATP-dependent DNA helicase Rep BED33_02055 IPR014017 UvrD-like DNA helicase, C-terminal BED33_02055 IPR013986 DExx box DNA helicase domain superfamily BED33_02055 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_02055 IPR014016 UvrD-like helicase, ATP-binding domain BED33_02055 IPR034739 UvrD/AddA helicase, N-terminal BED33_02060 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type BED33_02060 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site BED33_02070 IPR009057 Homeobox-like domain superfamily BED33_02070 IPR012337 Ribonuclease H-like superfamily BED33_02070 IPR038717 Tc1-like transposase, DDE domain BED33_02070 IPR025959 Winged helix-turn helix domain BED33_02090 IPR025758 Fic/DOC N-terminal BED33_02090 IPR003812 Fido domain BED33_02090 IPR036597 Fido-like domain superfamily BED33_02090 IPR026287 Protein adenylyltransferase SoFic-like BED33_02090 IPR040198 Fido domain-containing protein BED33_02125 IPR010998 Integrase/recombinase, N-terminal BED33_02125 IPR025166 Integrase, DNA-binding domain BED33_02125 IPR038488 Integrase, DNA-binding domain superfamily BED33_02125 IPR002104 Integrase, catalytic domain BED33_02125 IPR013762 Integrase-like, catalytic domain superfamily BED33_02125 IPR011010 DNA breaking-rejoining enzyme, catalytic core BED33_02125 IPR004107 Integrase, SAM-like, N-terminal BED33_02130 IPR020449 Transcription regulator HTH, AraC- type BED33_02130 IPR018060 DNA binding HTH domain, AraC-type BED33_02130 IPR018062 HTH domain AraC-type, conserved site BED33_02130 IPR028082 Periplasmic binding protein-like I BED33_02130 IPR009057 Homeobox-like domain superfamily BED33_02135 IPR001851 ABC transporter, permease BED33_02140 IPR013455 ABC transporter, D-xylose, ATP-binding protein BED33_02140 IPR003593 AAA+ ATPase domain BED33_02140 IPR003439 ABC transporter-like BED33_02140 IPR017871 ABC transporter, conserved site BED33_02140 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_02145 IPR028082 Periplasmic binding protein-like I BED33_02145 IPR013456 D-xylose ABC transporter, substrate-binding protein BED33_02145 IPR025997 Periplasmic binding protein BED33_02150 IPR001998 Xylose isomerase BED33_02150 IPR013452 Xylose isomerase, bacterial-type BED33_02150 IPR036237 Xylose isomerase-like superfamily BED33_02155 IPR000577 Carbohydrate kinase, FGGY BED33_02155 IPR018485 Carbohydrate kinase, FGGY, C-terminal BED33_02155 IPR018484 Carbohydrate kinase, FGGY, N-terminal BED33_02155 IPR018483 Carbohydrate kinase, FGGY, conserved site BED33_02155 IPR006000 Xylulokinase BED33_02160 IPR013783 Immunoglobulin-like fold BED33_02160 IPR008962 PapD-like superfamily BED33_02160 IPR036316 Pili assembly chaperone, C-terminal domain superfamily BED33_02160 IPR001829 Pili assembly chaperone, bacterial BED33_02160 IPR016148 Pili assembly chaperone, C-terminal BED33_02160 IPR018046 Pili assembly chaperone, conserved site BED33_02160 IPR016147 Pili assembly chaperone, N-terminal BED33_02175 IPR032905 O-acetyltransferase WecH BED33_02175 IPR002656 Acyltransferase 3 BED33_02180 IPR036259 MFS transporter superfamily BED33_02180 IPR020846 Major facilitator superfamily domain BED33_02180 IPR011701 Major facilitator superfamily BED33_02185 IPR036390 Winged helix DNA-binding domain superfamily BED33_02185 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_02185 IPR015190 Translation elongation factor SelB, winged helix, type 2 BED33_02185 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal BED33_02185 IPR009000 Translation protein, beta-barrel domain superfamily BED33_02185 IPR000795 Transcription factor, GTP-binding domain BED33_02185 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_02185 IPR031157 Tr-type G domain, conserved site BED33_02185 IPR015191 Translation elongation factor SelB, winged helix, type 3 BED33_02185 IPR004161 Translation elongation factor EFTu-like, domain 2 BED33_02185 IPR004535 Translation elongation factor, selenocysteine-specific BED33_02190 IPR018319 L-seryl-tRNA selenium transferase-like BED33_02190 IPR004534 L-seryl-tRNA(Sec) selenium transferase BED33_02190 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED33_02190 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain BED33_02190 IPR015424 Pyridoxal phosphate-dependent transferase BED33_02195 IPR024064 FdhE-like superfamily BED33_02195 IPR006452 Formate dehydrogenase accessory protein BED33_02200 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase BED33_02200 IPR016174 Di-haem cytochrome, transmembrane BED33_02200 IPR006471 Formate dehydrogenase, gamma subunit BED33_02205 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria BED33_02205 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BED33_02205 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BED33_02205 IPR038384 Formate dehydrogenase, C-terminal domain superfamily BED33_02205 IPR015246 Formate dehydrogenase, transmembrane BED33_02205 IPR014603 Formate dehydrogenase iron-sulphur subunit BED33_02210 IPR009010 Aspartate decarboxylase-like domain superfamily BED33_02210 IPR006657 Molybdopterin dinucleotide-binding domain BED33_02210 IPR006656 Molybdopterin oxidoreductase BED33_02210 IPR006443 Formate dehydrogenase-N, alpha subunit BED33_02210 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site BED33_02210 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site BED33_02210 IPR006311 Twin-arginine translocation pathway, signal sequence BED33_02210 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain BED33_02215 IPR009010 Aspartate decarboxylase-like domain superfamily BED33_02215 IPR006443 Formate dehydrogenase-N, alpha subunit BED33_02215 IPR006657 Molybdopterin dinucleotide-binding domain BED33_02215 IPR006656 Molybdopterin oxidoreductase BED33_02215 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain BED33_02215 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site BED33_02215 IPR006311 Twin-arginine translocation pathway, signal sequence BED33_02215 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site BED33_02220 IPR003786 Sulfur carrier protein FdhD BED33_02220 IPR016193 Cytidine deaminase-like BED33_02225 IPR019833 Manganese/iron superoxide dismutase, binding site BED33_02225 IPR001189 Manganese/iron superoxide dismutase BED33_02225 IPR019832 Manganese/iron superoxide dismutase, C-terminal BED33_02225 IPR019831 Manganese/iron superoxide dismutase, N-terminal BED33_02225 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily BED33_02225 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily BED33_02230 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BED33_02230 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding BED33_02230 IPR003660 HAMP domain BED33_02230 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site BED33_02230 IPR004090 Chemotaxis methyl-accepting receptor BED33_02230 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily BED33_02235 IPR005302 Molybdenum cofactor sulfurase, C-terminal BED33_02235 IPR005163 3-alpha domain BED33_02235 IPR011037 Pyruvate kinase-like, insert domain superfamily BED33_02240 IPR002716 PIN domain BED33_02240 IPR022907 VapC family BED33_02240 IPR029060 PIN-like domain superfamily BED33_02245 IPR007159 SpoVT-AbrB domain BED33_02245 IPR037914 SpoVT-AbrB domain superfamily BED33_02250 IPR021230 Protein of unknown function DUF2810 BED33_02255 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED33_02255 IPR015424 Pyridoxal phosphate-dependent transferase BED33_02255 IPR004839 Aminotransferase, class I/classII BED33_02255 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED33_02255 IPR036390 Winged helix DNA-binding domain superfamily BED33_02255 IPR000524 Transcription regulator HTH, GntR BED33_02255 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_02265 IPR007761 Mannitol repressor MtlR-like BED33_02265 IPR038026 MtlR-like superfamily BED33_02270 IPR013118 Mannitol dehydrogenase, C-terminal BED33_02270 IPR000669 Mannitol dehydrogenase BED33_02270 IPR023027 Mannitol dehydrogenase, conserved site BED33_02270 IPR013328 6-phosphogluconate dehydrogenase, domain 2 BED33_02270 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BED33_02270 IPR023028 Mannitol-1-phosphate 5-dehydrogenase BED33_02270 IPR036291 NAD(P)-binding domain superfamily BED33_02270 IPR013131 Mannitol dehydrogenase, N-terminal BED33_02275 IPR003501 Phosphotransferase system, EIIB component, type 2/3 BED33_02275 IPR029503 Phosphotransferase system EIIB component, mannitol-specific BED33_02275 IPR016152 Phosphotransferase/anion transporter BED33_02275 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC BED33_02275 IPR036095 PTS system IIB component-like superfamily BED33_02275 IPR002178 PTS EIIA type-2 domain BED33_02275 IPR013011 Phosphotransferase system, EIIB component, type 2 BED33_02275 IPR003352 Phosphotransferase system, EIIC BED33_02275 IPR013014 Phosphotransferase system, EIIC component, type 2 BED33_02280 IPR021413 Protein of unknown function DUF3053 BED33_02285 IPR008909 DALR anticodon binding BED33_02285 IPR015944 Glycine-tRNA ligase, beta subunit BED33_02285 IPR006194 Glycine-tRNA synthetase, heterodimeric BED33_02290 IPR002310 Glycine-tRNA ligase, alpha subunit BED33_02290 IPR006194 Glycine-tRNA synthetase, heterodimeric BED33_02295 IPR005019 Methyladenine glycosylase BED33_02295 IPR004597 DNA-3-methyladenine glycosylase I BED33_02295 IPR011257 DNA glycosylase BED33_02300 IPR016181 Acyl-CoA N-acyltransferase BED33_02300 IPR000182 GNAT domain BED33_02325 IPR036259 MFS transporter superfamily BED33_02325 IPR020846 Major facilitator superfamily domain BED33_02325 IPR011701 Major facilitator superfamily BED33_02330 IPR036291 NAD(P)-binding domain superfamily BED33_02330 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain BED33_02330 IPR023756 Glyoxylate/hydroxypyruvate reductase B BED33_02330 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 BED33_02330 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site BED33_02330 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BED33_02335 IPR006047 Glycosyl hydrolase, family 13, catalytic domain BED33_02335 IPR014635 Alpha-amylase, MalS type BED33_02335 IPR017853 Glycoside hydrolase superfamily BED33_02340 IPR004839 Aminotransferase, class I/classII BED33_02340 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED33_02340 IPR015424 Pyridoxal phosphate-dependent transferase BED33_02345 IPR023018 Transport protein YidE, putative BED33_02345 IPR006037 Regulator of K+ conductance, C-terminal BED33_02345 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily BED33_02345 IPR006512 YidE/YbjL duplication BED33_02350 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED33_02350 IPR003346 Transposase, IS116/IS110/IS902 BED33_02355 IPR036259 MFS transporter superfamily BED33_02355 IPR020846 Major facilitator superfamily domain BED33_02355 IPR011701 Major facilitator superfamily BED33_02355 IPR004734 Multidrug resistance protein BED33_02370 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain BED33_02370 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BED33_02370 IPR033892 Ferredoxin--NADP reductase, bacteria BED33_02370 IPR001433 Oxidoreductase FAD/NAD(P)-binding BED33_02370 IPR017938 Riboflavin synthase-like beta-barrel BED33_02370 IPR017927 FAD-binding domain, ferredoxin reductase-type BED33_02375 IPR008523 Protein of unknown function DUF805 BED33_02380 IPR009918 Protein of unknown function DUF1454 BED33_02385 IPR013785 Aldolase-type TIM barrel BED33_02385 IPR020861 Triosephosphate isomerase, active site BED33_02385 IPR035990 Triosephosphate isomerase superfamily BED33_02385 IPR000652 Triosephosphate isomerase BED33_02385 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic BED33_02395 IPR005669 Thiosulphate/Sulfate-binding protein BED33_02395 IPR034408 Sulphate/thiosulphate-binding site BED33_02395 IPR000957 Sulphate/thiosulphate-binding, conserved site BED33_02400 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type BED33_02400 IPR015912 Phosphofructokinase, conserved site BED33_02400 IPR000023 Phosphofructokinase domain BED33_02400 IPR035966 Phosphofructokinase superfamily BED33_02400 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic BED33_02400 IPR022953 ATP-dependent 6-phosphofructokinase BED33_02405 IPR027469 Cation efflux transmembrane domain superfamily BED33_02405 IPR002524 Cation efflux protein BED33_02405 IPR027470 Cation efflux protein, cytoplasmic domain BED33_02405 IPR036837 Cation efflux protein, cytoplasmic domain superfamily BED33_02405 IPR023783 Cation efflux pump FieF BED33_02410 IPR012899 LTXXQ motif family protein BED33_02415 IPR001789 Signal transduction response regulator, receiver domain BED33_02415 IPR039420 Transcriptional regulatory protein WalR-like BED33_02415 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_02415 IPR011006 CheY-like superfamily BED33_02415 IPR001867 OmpR/PhoB-type DNA-binding domain BED33_02420 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BED33_02420 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BED33_02420 IPR005467 Histidine kinase domain BED33_02420 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BED33_02420 IPR003594 Histidine kinase/HSP90-like ATPase BED33_02420 IPR003660 HAMP domain BED33_02420 IPR038515 CpxA, periplasmic domain superfamily BED33_02420 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BED33_02420 IPR032404 Two-component sensor protein CpxA, periplasmic domain BED33_02425 IPR035451 Ada-like domain superfamily BED33_02425 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_02425 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain BED33_02425 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain BED33_02425 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding BED33_02425 IPR018062 HTH domain AraC-type, conserved site BED33_02425 IPR018060 DNA binding HTH domain, AraC-type BED33_02425 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily BED33_02425 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site BED33_02425 IPR004026 Ada DNA repair, metal-binding BED33_02425 IPR016221 Bifunctional regulatory protein Ada BED33_02425 IPR009057 Homeobox-like domain superfamily BED33_02430 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BED33_02430 IPR029028 Alpha/beta knot methyltransferases BED33_02430 IPR001537 tRNA/rRNA methyltransferase, SpoU type BED33_02430 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase BED33_02435 IPR001451 Hexapeptide repeat BED33_02435 IPR042122 Serine acetyltransferase, N-terminal domain superfamily BED33_02435 IPR005881 Serine O-acetyltransferase BED33_02435 IPR011004 Trimeric LpxA-like superfamily BED33_02435 IPR018357 Hexapeptide transferase, conserved site BED33_02435 IPR010493 Serine acetyltransferase, N-terminal BED33_02440 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal BED33_02440 IPR013328 6-phosphogluconate dehydrogenase, domain 2 BED33_02440 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal BED33_02440 IPR036291 NAD(P)-binding domain superfamily BED33_02440 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent BED33_02440 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BED33_02445 IPR035958 SecB-like superfamily BED33_02445 IPR003708 Bacterial protein export chaperone SecB BED33_02450 IPR011767 Glutaredoxin active site BED33_02450 IPR011900 Glutaredoxin, GrxC BED33_02450 IPR036249 Thioredoxin-like superfamily BED33_02450 IPR002109 Glutaredoxin BED33_02450 IPR014025 Glutaredoxin subgroup BED33_02455 IPR001763 Rhodanese-like domain BED33_02455 IPR036873 Rhodanese-like domain superfamily BED33_02460 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily BED33_02460 IPR011258 BPG-independent PGAM, N-terminal BED33_02460 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent BED33_02460 IPR006124 Metalloenzyme BED33_02460 IPR017850 Alkaline-phosphatase-like, core domain superfamily BED33_02465 IPR011055 Duplicated hybrid motif BED33_02465 IPR016047 Peptidase M23 BED33_02470 IPR006837 Divergent polysaccharide deacetylase BED33_02470 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel BED33_02485 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site BED33_02485 IPR036291 NAD(P)-binding domain superfamily BED33_02485 IPR013149 Alcohol dehydrogenase, C-terminal BED33_02485 IPR013154 Alcohol dehydrogenase, N-terminal BED33_02485 IPR011032 GroES-like superfamily BED33_02485 IPR004627 L-threonine 3-dehydrogenase BED33_02485 IPR020843 Polyketide synthase, enoylreductase domain BED33_02490 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase BED33_02490 IPR004839 Aminotransferase, class I/classII BED33_02490 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site BED33_02490 IPR015424 Pyridoxal phosphate-dependent transferase BED33_02490 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED33_02490 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED33_02495 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase BED33_02495 IPR001509 NAD-dependent epimerase/dehydratase BED33_02495 IPR036291 NAD(P)-binding domain superfamily BED33_02500 IPR011910 ADP-heptose--LPS heptosyltransferase 2 BED33_02500 IPR002201 Glycosyl transferase, family 9 BED33_02505 IPR011908 Lipopolysaccharide heptosyltransferase I BED33_02505 IPR002201 Glycosyl transferase, family 9 BED33_02510 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily BED33_02510 IPR039901 3-deoxy-D-manno-octulosonic acid transferase BED33_02510 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal BED33_02515 IPR001173 Glycosyltransferase 2-like BED33_02515 IPR029044 Nucleotide-diphospho-sugar transferases BED33_02520 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED33_02520 IPR004821 Cytidyltransferase-like domain BED33_02520 IPR001980 Phosphopantetheine adenylyltransferase BED33_02525 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type BED33_02525 IPR010663 Zinc finger, FPG/IleRS-type BED33_02525 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site BED33_02525 IPR010979 Ribosomal protein S13-like, H2TH BED33_02525 IPR035937 MutM-like, N-terminal BED33_02525 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain BED33_02525 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding BED33_02525 IPR020629 Formamidopyrimidine-DNA glycosylase BED33_02530 IPR018264 Ribosomal protein L33, conserved site BED33_02530 IPR011332 Zinc-binding ribosomal protein BED33_02530 IPR038584 Ribosomal protein L33 superfamily BED33_02530 IPR001705 Ribosomal protein L33 BED33_02535 IPR001383 Ribosomal protein L28 BED33_02535 IPR026569 Ribosomal protein L28/L24 BED33_02535 IPR037147 Ribosomal protein L28/L24 superfamily BED33_02535 IPR034704 L28p-like BED33_02540 IPR001405 Uncharacterised protein family UPF0758 BED33_02540 IPR020891 Uncharacterised protein family UPF0758, conserved site BED33_02540 IPR022820 Uncharacterised protein family UPF0758, YicR subfamily BED33_02540 IPR025657 RadC-like JAB domain BED33_02540 IPR010994 RuvA domain 2-like BED33_02540 IPR037518 MPN domain BED33_02545 IPR035929 CoaB-like superfamily BED33_02545 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC BED33_02545 IPR003382 Flavoprotein BED33_02545 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal BED33_02545 IPR036551 Flavin prenyltransferase-like BED33_02550 IPR033704 dUTPase, trimeric BED33_02550 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase BED33_02550 IPR036157 dUTPase-like superfamily BED33_02550 IPR029054 dUTPase-like BED33_02555 IPR001647 DNA-binding HTH domain, TetR-type BED33_02555 IPR009057 Homeobox-like domain superfamily BED33_02555 IPR023772 DNA-binding HTH domain, TetR-type, conserved site BED33_02555 IPR023769 Nucleoid occlusion factor SlmA BED33_02555 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BED33_02560 IPR000836 Phosphoribosyltransferase domain BED33_02560 IPR029057 Phosphoribosyltransferase-like BED33_02560 IPR004467 Orotate phosphoribosyl transferase domain BED33_02560 IPR023031 Orotate phosphoribosyltransferase BED33_02565 IPR002381 Ribonuclease PH, bacterial-type BED33_02565 IPR018336 Ribonuclease PH, conserved site BED33_02565 IPR027408 PNPase/RNase PH domain superfamily BED33_02565 IPR001247 Exoribonuclease, phosphorolytic domain 1 BED33_02565 IPR015847 Exoribonuclease, phosphorolytic domain 2 BED33_02565 IPR036345 Exoribonuclease, PH domain 2 superfamily BED33_02565 IPR020568 Ribosomal protein S5 domain 2-type fold BED33_02570 IPR013551 Domain of unknown function DUF1732 BED33_02570 IPR005229 Conserved hypothetical protein CHP00255 BED33_02570 IPR013527 YicC-like, N-terminal BED33_02575 IPR025166 Integrase, DNA-binding domain BED33_02575 IPR038488 Integrase, DNA-binding domain superfamily BED33_02575 IPR011010 DNA breaking-rejoining enzyme, catalytic core BED33_02575 IPR002104 Integrase, catalytic domain BED33_02575 IPR013762 Integrase-like, catalytic domain superfamily BED33_02575 IPR010998 Integrase/recombinase, N-terminal BED33_02595 IPR013557 AntA/AntB antirepressor BED33_02595 IPR018876 Bacteriophage P22, antirepressor protein, C-terminal BED33_02675 IPR001633 EAL domain BED33_02675 IPR000014 PAS domain BED33_02675 IPR035965 PAS domain superfamily BED33_02675 IPR000160 GGDEF domain BED33_02675 IPR035919 EAL domain superfamily BED33_02675 IPR029787 Nucleotide cyclase BED33_02680 IPR014748 Enoyl-CoA hydratase, C-terminal BED33_02680 IPR029045 ClpP/crotonase-like domain superfamily BED33_02680 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site BED33_02680 IPR001753 Enoyl-CoA hydratase/isomerase BED33_02685 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain BED33_02685 IPR008276 Concentrative nucleoside transporter BED33_02685 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial BED33_02685 IPR011657 Concentrative nucleoside transporter C-terminal domain BED33_02685 IPR002668 Concentrative nucleoside transporter N-terminal domain BED33_02690 IPR038717 Tc1-like transposase, DDE domain BED33_02690 IPR012337 Ribonuclease H-like superfamily BED33_02690 IPR025959 Winged helix-turn helix domain BED33_02690 IPR009057 Homeobox-like domain superfamily BED33_02700 IPR005115 Uncharacterised domain UPF0126 BED33_02710 IPR020590 Guanylate kinase, conserved site BED33_02710 IPR017665 Guanylate kinase BED33_02710 IPR008144 Guanylate kinase-like domain BED33_02710 IPR008145 Guanylate kinase/L-type calcium channel beta subunit BED33_02710 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_02715 IPR012293 RNA polymerase subunit, RPB6/omega BED33_02715 IPR006110 RNA polymerase, subunit omega/K/RPB6 BED33_02715 IPR003716 DNA-directed RNA polymerase, omega subunit BED33_02715 IPR036161 RPB6/omega subunit-like superfamily BED33_02720 IPR012675 Beta-grasp domain superfamily BED33_02720 IPR003607 HD/PDEase domain BED33_02720 IPR004095 TGS BED33_02720 IPR007685 RelA/SpoT BED33_02720 IPR002912 ACT domain BED33_02720 IPR033655 RelA, TGS domain BED33_02720 IPR012676 TGS-like BED33_02720 IPR004811 RelA/SpoT family BED33_02725 IPR001537 tRNA/rRNA methyltransferase, SpoU type BED33_02725 IPR029028 Alpha/beta knot methyltransferases BED33_02725 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase BED33_02725 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BED33_02725 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal BED33_02730 IPR004609 ATP-dependent DNA helicase RecG BED33_02730 IPR033454 RecG, wedge domain BED33_02730 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_02730 IPR012340 Nucleic acid-binding, OB-fold BED33_02730 IPR001650 Helicase, C-terminal BED33_02730 IPR014001 Helicase superfamily 1/2, ATP-binding domain BED33_02730 IPR011545 DEAD/DEAH box helicase domain BED33_02735 IPR004445 Sodium/glutamate symport carrier protein GltS BED33_02740 IPR006042 Xanthine/uracil permease BED33_02740 IPR006043 Xanthine/uracil/vitamin C permease BED33_02745 IPR007844 AsmA BED33_02760 IPR038722 Ner, winged helix-turn-helix DNA-binding domain BED33_02760 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BED33_02765 IPR012660 Thioesterase, putative BED33_02765 IPR029069 HotDog domain superfamily BED33_02765 IPR000182 GNAT domain BED33_02765 IPR016181 Acyl-CoA N-acyltransferase BED33_02770 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily BED33_02770 IPR003732 D-aminoacyl-tRNA deacylase DTD BED33_02775 IPR017039 Virulence factor BrkB BED33_02775 IPR023679 Uncharacterised protein family UPF0761, bacterial BED33_02780 IPR036412 HAD-like superfamily BED33_02780 IPR006439 HAD hydrolase, subfamily IA BED33_02780 IPR041492 Haloacid dehalogenase-like hydrolase BED33_02780 IPR023214 HAD superfamily BED33_02780 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BED33_02790 IPR008147 Glutamine synthetase, beta-Grasp domain BED33_02790 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain BED33_02790 IPR008146 Glutamine synthetase, catalytic domain BED33_02790 IPR027303 Glutamine synthetase, glycine-rich site BED33_02790 IPR004809 Glutamine synthetase type I BED33_02790 IPR001637 Glutamine synthetase class-I, adenylation site BED33_02790 IPR027302 Glutamine synthetase, N-terminal conserved site BED33_02790 IPR036651 Glutamine synthetase, N-terminal domain superfamily BED33_02800 IPR013767 PAS fold BED33_02800 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BED33_02800 IPR000014 PAS domain BED33_02800 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BED33_02800 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BED33_02800 IPR005467 Histidine kinase domain BED33_02800 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BED33_02800 IPR003594 Histidine kinase/HSP90-like ATPase BED33_02800 IPR035965 PAS domain superfamily BED33_02805 IPR001789 Signal transduction response regulator, receiver domain BED33_02805 IPR009057 Homeobox-like domain superfamily BED33_02805 IPR002197 DNA binding HTH domain, Fis-type BED33_02805 IPR025944 Sigma-54 interaction domain, conserved site BED33_02805 IPR010114 DNA-binding transcriptional regulator NtrC BED33_02805 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_02805 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BED33_02805 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BED33_02805 IPR002078 RNA polymerase sigma factor 54 interaction domain BED33_02805 IPR003593 AAA+ ATPase domain BED33_02805 IPR011006 CheY-like superfamily BED33_02810 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN BED33_02810 IPR007197 Radical SAM BED33_02810 IPR023404 Radical SAM, alpha/beta horseshoe BED33_02810 IPR010723 HemN, C-terminal BED33_02810 IPR034505 Anaerobic coproporphyrinogen-III oxidase BED33_02810 IPR006638 Elp3/MiaB/NifB BED33_02815 IPR007336 Der GTPase activator BED33_02820 IPR006073 GTP binding domain BED33_02820 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_02820 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC BED33_02820 IPR030393 EngB-type guanine nucleotide-binding (G) domain BED33_02825 IPR012337 Ribonuclease H-like superfamily BED33_02825 IPR002562 3'-5' exonuclease domain BED33_02825 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal BED33_02825 IPR002421 5'-3' exonuclease, N-terminal BED33_02825 IPR036279 5'-3' exonuclease, C-terminal domain superfamily BED33_02825 IPR036397 Ribonuclease H superfamily BED33_02825 IPR018320 DNA polymerase 1 BED33_02825 IPR002298 DNA polymerase A BED33_02825 IPR019760 DNA-directed DNA polymerase, family A, conserved site BED33_02825 IPR001098 DNA-directed DNA polymerase, family A, palm domain BED33_02825 IPR020045 DNA polymerase I-like, H3TH domain BED33_02825 IPR008918 Helix-hairpin-helix motif, class 2 BED33_02825 IPR029060 PIN-like domain superfamily BED33_02830 IPR013766 Thioredoxin domain BED33_02830 IPR017937 Thioredoxin, conserved site BED33_02830 IPR036249 Thioredoxin-like superfamily BED33_02830 IPR001853 DSBA-like thioredoxin domain BED33_02830 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL BED33_02835 IPR002575 Aminoglycoside phosphotransferase BED33_02835 IPR011009 Protein kinase-like domain superfamily BED33_02835 IPR032882 SrkA/RdoA protein kinase BED33_02840 IPR009383 Protein of unknown function DUF1040 BED33_02840 IPR038134 YihD-like superfamily BED33_02845 IPR013482 Molybdenum cofactor guanylyltransferase BED33_02845 IPR025877 MobA-like NTP transferase BED33_02845 IPR029044 Nucleotide-diphospho-sugar transferases BED33_02850 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain BED33_02850 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_02855 IPR036397 Ribonuclease H superfamily BED33_02855 IPR012337 Ribonuclease H-like superfamily BED33_02855 IPR001584 Integrase, catalytic core BED33_02855 IPR025948 HTH-like domain BED33_02885 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_02885 IPR000524 Transcription regulator HTH, GntR BED33_02885 IPR008920 Transcription regulator FadR/GntR, C-terminal BED33_02885 IPR011711 GntR, C-terminal BED33_02885 IPR036390 Winged helix DNA-binding domain superfamily BED33_02890 IPR004638 Drug resistance transporter EmrB-like BED33_02890 IPR011701 Major facilitator superfamily BED33_02890 IPR020846 Major facilitator superfamily domain BED33_02890 IPR036259 MFS transporter superfamily BED33_02895 IPR028082 Periplasmic binding protein-like I BED33_02895 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BED33_02895 IPR000843 LacI-type HTH domain BED33_02900 IPR029056 Ribokinase-like BED33_02900 IPR002139 Ribokinase/fructokinase BED33_02900 IPR011611 Carbohydrate kinase PfkB BED33_02900 IPR011877 Ribokinase BED33_02900 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site BED33_02905 IPR028082 Periplasmic binding protein-like I BED33_02905 IPR025997 Periplasmic binding protein BED33_02910 IPR001851 ABC transporter, permease BED33_02915 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_02915 IPR015861 ABC transporter, ribose import, RbsA BED33_02915 IPR017871 ABC transporter, conserved site BED33_02915 IPR003439 ABC transporter-like BED33_02915 IPR003593 AAA+ ATPase domain BED33_02920 IPR023064 D-ribose pyranase BED33_02920 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU BED33_02920 IPR023750 RbsD-like superfamily BED33_02925 IPR003855 Potassium transporter BED33_02925 IPR023051 Potassium uptake protein, low affinity, Kup BED33_02930 IPR003593 AAA+ ATPase domain BED33_02930 IPR041538 ATPase RavA-like, AAA lid domain BED33_02930 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_02930 IPR011704 ATPase, dynein-related, AAA domain BED33_02930 IPR022547 ATPase, RavA, C-terminal BED33_02930 IPR023671 ATPase RavA BED33_02935 IPR002035 von Willebrand factor, type A BED33_02935 IPR036465 von Willebrand factor A-like domain superfamily BED33_02935 IPR023481 Uncharacterised protein family ViaA BED33_02935 IPR008912 Uncharacterised protein family CoxE-like BED33_02945 IPR004618 Aspartate--ammonia ligase BED33_02945 IPR006195 Aminoacyl-tRNA synthetase, class II BED33_02950 IPR011008 Dimeric alpha-beta barrel BED33_02950 IPR019888 Transcription regulator AsnC-type BED33_02950 IPR011991 ArsR-like helix-turn-helix domain BED33_02950 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain BED33_02950 IPR036390 Winged helix DNA-binding domain superfamily BED33_02950 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_02950 IPR019885 Transcription regulator HTH, AsnC-type, conserved site BED33_02950 IPR000485 AsnC-type HTH domain BED33_02955 IPR008254 Flavodoxin/nitric oxide synthase BED33_02955 IPR029039 Flavoprotein-like superfamily BED33_02960 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG BED33_02960 IPR026904 GidA associated domain 3 BED33_02960 IPR036188 FAD/NAD(P)-binding domain superfamily BED33_02960 IPR020595 MnmG-related, conserved site BED33_02960 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related BED33_02965 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED33_02965 IPR003682 rRNA small subunit methyltransferase G BED33_02970 IPR005598 ATP synthase protein I BED33_02975 IPR035908 ATP synthase, F0 complex, subunit A superfamily BED33_02975 IPR023011 ATP synthase, F0 complex, subunit A, active site BED33_02975 IPR000568 ATP synthase, F0 complex, subunit A BED33_02980 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast BED33_02980 IPR000454 ATP synthase, F0 complex, subunit C BED33_02980 IPR035921 F/V-ATP synthase subunit C superfamily BED33_02980 IPR002379 V-ATPase proteolipid subunit C-like domain BED33_02980 IPR038662 F1F0 ATP synthase subunit C superfamily BED33_02980 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site BED33_02985 IPR005864 ATP synthase, F0 complex, subunit b, bacterial BED33_02985 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast BED33_02985 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily BED33_02990 IPR020781 ATPase, OSCP/delta subunit, conserved site BED33_02990 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily BED33_02990 IPR000711 ATPase, OSCP/delta subunit BED33_02995 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site BED33_02995 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain BED33_02995 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain BED33_02995 IPR005294 ATP synthase, F1 complex, alpha subunit BED33_02995 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily BED33_02995 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily BED33_02995 IPR000793 ATP synthase, alpha subunit, C-terminal BED33_02995 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily BED33_02995 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_02995 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain BED33_03000 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site BED33_03000 IPR000131 ATP synthase, F1 complex, gamma subunit BED33_03000 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily BED33_03005 IPR003593 AAA+ ATPase domain BED33_03005 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain BED33_03005 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal BED33_03005 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_03005 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily BED33_03005 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain BED33_03005 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site BED33_03005 IPR005722 ATP synthase, F1 complex, beta subunit BED33_03010 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal BED33_03010 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal BED33_03010 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain BED33_03010 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily BED33_03010 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit BED33_03015 IPR011004 Trimeric LpxA-like superfamily BED33_03015 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase BED33_03015 IPR038009 GlmU, C-terminal LbH domain BED33_03015 IPR001451 Hexapeptide repeat BED33_03015 IPR018357 Hexapeptide transferase, conserved site BED33_03015 IPR025877 MobA-like NTP transferase BED33_03015 IPR029044 Nucleotide-diphospho-sugar transferases BED33_03020 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising BED33_03020 IPR035490 GlmS/FrlB, SIS domain 2 BED33_03020 IPR035466 GlmS/AgaS, SIS domain 1 BED33_03020 IPR017932 Glutamine amidotransferase type 2 domain BED33_03020 IPR001347 Sugar isomerase (SIS) BED33_03020 IPR029055 Nucleophile aminohydrolases, N-terminal BED33_03025 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS BED33_03025 IPR024370 PBP domain BED33_03030 IPR011864 Phosphate ABC transporter, permease protein PstC BED33_03030 IPR035906 MetI-like superfamily BED33_03030 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED33_03035 IPR005672 Phosphate transport system permease protein PstA BED33_03035 IPR035906 MetI-like superfamily BED33_03035 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED33_03040 IPR003593 AAA+ ATPase domain BED33_03040 IPR003439 ABC transporter-like BED33_03040 IPR017871 ABC transporter, conserved site BED33_03040 IPR015850 ABC transporter, phosphate import, PstB BED33_03040 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_03040 IPR005670 Phosphate transport system permease protein 1 BED33_03045 IPR038078 PhoU-like domain superfamily BED33_03045 IPR026022 PhoU domain BED33_03045 IPR028366 Phosphate transport system protein PhoU BED33_03055 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter BED33_03055 IPR001320 Ionotropic glutamate receptor BED33_03055 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BED33_03055 IPR018313 Solute-binding protein family 3, conserved site BED33_03065 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED33_03065 IPR035906 MetI-like superfamily BED33_03065 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain BED33_03070 IPR036412 HAD-like superfamily BED33_03070 IPR006439 HAD hydrolase, subfamily IA BED33_03070 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BED33_03070 IPR041492 Haloacid dehalogenase-like hydrolase BED33_03070 IPR023214 HAD superfamily BED33_03075 IPR026033 Azaguanine-like transporters BED33_03075 IPR006043 Xanthine/uracil/vitamin C permease BED33_03085 IPR000792 Transcription regulator LuxR, C-terminal BED33_03085 IPR001789 Signal transduction response regulator, receiver domain BED33_03085 IPR011006 CheY-like superfamily BED33_03085 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_03085 IPR016032 Signal transduction response regulator, C-terminal effector BED33_03090 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BED33_03090 IPR005467 Histidine kinase domain BED33_03090 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BED33_03090 IPR003594 Histidine kinase/HSP90-like ATPase BED33_03090 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BED33_03090 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BED33_03090 IPR029151 Periplasmic sensor-like domain superfamily BED33_03095 IPR005025 NADPH-dependent FMN reductase-like BED33_03095 IPR029039 Flavoprotein-like superfamily BED33_03100 IPR003660 HAMP domain BED33_03100 IPR004090 Chemotaxis methyl-accepting receptor BED33_03100 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily BED33_03100 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BED33_03100 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site BED33_03100 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding BED33_03105 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED33_03105 IPR035906 MetI-like superfamily BED33_03110 IPR003439 ABC transporter-like BED33_03110 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain BED33_03110 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal BED33_03110 IPR017871 ABC transporter, conserved site BED33_03110 IPR026253 Methionine import ATP-binding protein MetN BED33_03110 IPR018449 NIL domain BED33_03110 IPR003593 AAA+ ATPase domain BED33_03110 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_03120 IPR010758 Trans-2-enoyl-CoA reductase BED33_03120 IPR024906 Enoyl reductase FAD binding domain BED33_03120 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative BED33_03125 IPR031168 TrmE-type guanine nucleotide-binding domain BED33_03125 IPR025867 MnmE, helical domain BED33_03125 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_03125 IPR005225 Small GTP-binding protein domain BED33_03125 IPR027368 tRNA modification GTPase MnmE domain 2 BED33_03125 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 BED33_03125 IPR018948 GTP-binding protein TrmE, N-terminal BED33_03125 IPR006073 GTP binding domain BED33_03125 IPR004520 tRNA modification GTPase MnmE BED33_03130 IPR019998 Membrane insertase YidC BED33_03130 IPR028053 Membrane insertase YidC, N-terminal BED33_03130 IPR038210 Membrane insertase YidC, periplasmic domain BED33_03130 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 BED33_03130 IPR038221 YidC, periplasmic domain superfamily BED33_03130 IPR028055 Membrane insertase YidC/Oxa1, C-terminal BED33_03135 IPR002696 Putative membrane protein insertion efficiency factor BED33_03140 IPR000100 Ribonuclease P BED33_03140 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BED33_03140 IPR020568 Ribosomal protein S5 domain 2-type fold BED33_03140 IPR020539 Ribonuclease P, conserved site BED33_03145 IPR000271 Ribosomal protein L34 BED33_03145 IPR020939 Ribosomal protein L34, conserved site BED33_03150 IPR010921 Trp repressor/replication initiator BED33_03150 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_03150 IPR038454 DnaA, N-terminal domain superfamily BED33_03150 IPR024633 DnaA N-terminal domain BED33_03150 IPR018312 Chromosomal replication control, initiator DnaA, conserved site BED33_03150 IPR013317 Chromosomal replication initiator protein DnaA BED33_03150 IPR003593 AAA+ ATPase domain BED33_03150 IPR020591 Chromosomal replication control, initiator DnaA-like BED33_03150 IPR001957 Chromosomal replication control, initiator DnaA BED33_03150 IPR013159 Chromosomal replication initiator, DnaA C-terminal BED33_03155 IPR001001 DNA polymerase III, beta sliding clamp BED33_03155 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal BED33_03155 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal BED33_03155 IPR022637 DNA polymerase III, beta sliding clamp, central BED33_03160 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_03160 IPR003395 RecF/RecN/SMC, N-terminal BED33_03160 IPR042174 DNA-binding RecF, domain 2 BED33_03160 IPR018078 DNA-binding, RecF, conserved site BED33_03160 IPR001238 DNA-binding, RecF BED33_03165 IPR003594 Histidine kinase/HSP90-like ATPase BED33_03165 IPR041423 DNA gyrase subunit B insert domain BED33_03165 IPR013760 DNA topoisomerase, type IIA-like domain superfamily BED33_03165 IPR001241 DNA topoisomerase, type IIA BED33_03165 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BED33_03165 IPR020568 Ribosomal protein S5 domain 2-type fold BED33_03165 IPR011557 DNA gyrase, subunit B BED33_03165 IPR002288 DNA gyrase B subunit, C-terminal BED33_03165 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal BED33_03165 IPR034160 DNA gyrase subunit B, TOPRIM domain BED33_03165 IPR006171 TOPRIM domain BED33_03165 IPR018522 DNA topoisomerase, type IIA, conserved site BED33_03165 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 BED33_03165 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BED33_03170 IPR006379 HAD-superfamily hydrolase, subfamily IIB BED33_03170 IPR000150 Cof family BED33_03170 IPR036412 HAD-like superfamily BED33_03170 IPR023214 HAD superfamily BED33_03175 IPR036291 NAD(P)-binding domain superfamily BED33_03175 IPR003462 Ornithine cyclodeaminase/mu-crystallin BED33_03175 IPR014334 Ectoine utilization protein EutC BED33_03175 IPR023401 Ornithine cyclodeaminase, N-terminal BED33_03180 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BED33_03180 IPR005789 Threonine dehydratase, catabolic BED33_03180 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site BED33_03180 IPR001926 Pyridoxal-phosphate dependent enzyme BED33_03185 IPR011042 Six-bladed beta-propeller, TolB-like BED33_03185 IPR022223 Protein of unknown function DUF3748 BED33_03185 IPR011659 WD40-like Beta Propeller BED33_03190 IPR010780 Protein of unknown function DUF1375 BED33_03195 IPR023728 Small heat shock protein IbpA BED33_03195 IPR002068 Alpha crystallin/Hsp20 domain BED33_03195 IPR037913 Small heat shock protein IbpA/IbpB, ACD domain BED33_03195 IPR008978 HSP20-like chaperone BED33_03200 IPR008978 HSP20-like chaperone BED33_03200 IPR037913 Small heat shock protein IbpA/IbpB, ACD domain BED33_03200 IPR002068 Alpha crystallin/Hsp20 domain BED33_03200 IPR022848 Small heat shock protein IbpB BED33_03205 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED33_03205 IPR003346 Transposase, IS116/IS110/IS902 BED33_03215 IPR000577 Carbohydrate kinase, FGGY BED33_03215 IPR018485 Carbohydrate kinase, FGGY, C-terminal BED33_03215 IPR018483 Carbohydrate kinase, FGGY, conserved site BED33_03215 IPR018484 Carbohydrate kinase, FGGY, N-terminal BED33_03215 IPR005999 Glycerol kinase BED33_03220 IPR023271 Aquaporin-like BED33_03220 IPR000425 Major intrinsic protein BED33_03220 IPR022357 Major intrinsic protein, conserved site BED33_03230 IPR009252 Cell division protein ZapB BED33_03235 IPR010203 Regulator of ribonuclease activity A BED33_03235 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein BED33_03235 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily BED33_03235 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria BED33_03240 IPR000537 UbiA prenyltransferase family BED33_03240 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase BED33_03240 IPR026046 UbiA prenyltransferase domain containing protein 1 BED33_03245 IPR019489 Clp ATPase, C-terminal BED33_03245 IPR003593 AAA+ ATPase domain BED33_03245 IPR004491 Heat shock protein HslU BED33_03245 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_03245 IPR003959 ATPase, AAA-type, core BED33_03250 IPR001353 Proteasome, subunit alpha/beta BED33_03250 IPR023333 Proteasome B-type subunit BED33_03250 IPR022281 ATP-dependent protease, HslV subunit BED33_03250 IPR029055 Nucleophile aminohydrolases, N-terminal BED33_03255 IPR007730 Sporulation-like domain BED33_03255 IPR011930 Cell division protein FtsN BED33_03255 IPR036680 Sporulation-like domain superfamily BED33_03260 IPR000843 LacI-type HTH domain BED33_03260 IPR028082 Periplasmic binding protein-like I BED33_03260 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BED33_03265 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain BED33_03265 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_03265 IPR005259 Primosomal protein N' BED33_03265 IPR041222 Primosomal protein N', 3' DNA-binding domain BED33_03265 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily BED33_03265 IPR011545 DEAD/DEAH box helicase domain BED33_03265 IPR014001 Helicase superfamily 1/2, ATP-binding domain BED33_03265 IPR001650 Helicase, C-terminal BED33_03265 IPR041236 Primosomal protein N, C-terminal domain BED33_03270 IPR034704 L28p-like BED33_03270 IPR002150 Ribosomal protein L31 BED33_03270 IPR027491 Ribosomal protein L31 type A BED33_03270 IPR042105 Ribosomal protein L31 superfamily BED33_03275 IPR010985 Ribbon-helix-helix BED33_03275 IPR002084 Methionine repressor MetJ BED33_03275 IPR023453 Methionine repressor MetJ domain superfamily BED33_03280 IPR015424 Pyridoxal phosphate-dependent transferase BED33_03280 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED33_03280 IPR011821 O-succinylhomoserine (thiol)-lyase BED33_03280 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED33_03280 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme BED33_03285 IPR001342 Homoserine dehydrogenase, catalytic BED33_03285 IPR018042 Aspartate kinase, conserved site BED33_03285 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding BED33_03285 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I BED33_03285 IPR019811 Homoserine dehydrogenase, conserved site BED33_03285 IPR036291 NAD(P)-binding domain superfamily BED33_03285 IPR001048 Aspartate/glutamate/uridylate kinase BED33_03285 IPR041743 Bifunctional aspartokinase/homoserine dehydrogenase, N-terminal catalytic domain BED33_03285 IPR001341 Aspartate kinase BED33_03285 IPR036393 Acetylglutamate kinase-like superfamily BED33_03290 IPR029041 FAD-linked oxidoreductase-like BED33_03290 IPR003171 Methylenetetrahydrofolate reductase BED33_03290 IPR004620 5,10-methylenetetrahydrofolate reductase BED33_03295 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily BED33_03295 IPR033129 Phosphoenolpyruvate carboxylase, His active site BED33_03295 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site BED33_03295 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type BED33_03295 IPR021135 Phosphoenolpyruvate carboxylase BED33_03300 IPR011650 Peptidase M20, dimerisation domain BED33_03300 IPR010169 Acetylornithine deacetylase ArgE BED33_03300 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site BED33_03300 IPR002933 Peptidase M20 BED33_03300 IPR036264 Bacterial exopeptidase dimerisation domain BED33_03305 IPR000534 Semialdehyde dehydrogenase, NAD-binding BED33_03305 IPR036291 NAD(P)-binding domain superfamily BED33_03305 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site BED33_03305 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 BED33_03305 IPR012280 Semialdehyde dehydrogenase, dimerisation domain BED33_03310 IPR004662 Acetylglutamate kinase family BED33_03310 IPR001048 Aspartate/glutamate/uridylate kinase BED33_03310 IPR041731 N-Acetyl-L-glutamate kinase, noncyclic BED33_03310 IPR036393 Acetylglutamate kinase-like superfamily BED33_03310 IPR037528 Acetylglutamate kinase ArgB BED33_03315 IPR024083 Fumarase/histidase, N-terminal BED33_03315 IPR020557 Fumarate lyase, conserved site BED33_03315 IPR000362 Fumarate lyase family BED33_03315 IPR029419 Argininosuccinate lyase, C-terminal BED33_03315 IPR008948 L-Aspartase-like BED33_03315 IPR009049 Argininosuccinate lyase BED33_03315 IPR022761 Fumarate lyase, N-terminal BED33_03320 IPR011276 TonB-dependent haem/haemoglobin receptor BED33_03320 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BED33_03320 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor BED33_03320 IPR037066 TonB-dependent receptor, plug domain superfamily BED33_03320 IPR000531 TonB-dependent receptor-like, beta-barrel BED33_03320 IPR039426 Vitamin B12 transporter BtuB-like BED33_03320 IPR012910 TonB-dependent receptor, plug domain BED33_03345 IPR036640 ABC transporter type 1, transmembrane domain superfamily BED33_03345 IPR017871 ABC transporter, conserved site BED33_03345 IPR010128 ATPase, type I secretion system, PrtD BED33_03345 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_03345 IPR003439 ABC transporter-like BED33_03345 IPR011527 ABC transporter type 1, transmembrane domain BED33_03345 IPR003593 AAA+ ATPase domain BED33_03350 IPR006144 Secretion protein HlyD, conserved site BED33_03350 IPR010129 Type I secretion membrane fusion protein, HlyD family BED33_03370 IPR011767 Glutaredoxin active site BED33_03370 IPR002109 Glutaredoxin BED33_03370 IPR011906 Glutaredoxin domain BED33_03370 IPR014025 Glutaredoxin subgroup BED33_03370 IPR037944 Peroxiredoxin-5-like BED33_03370 IPR013740 Redoxin BED33_03370 IPR036249 Thioredoxin-like superfamily BED33_03375 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_03375 IPR036390 Winged helix DNA-binding domain superfamily BED33_03375 IPR005119 LysR, substrate-binding BED33_03375 IPR000847 Transcription regulator HTH, LysR BED33_03380 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BED33_03380 IPR036188 FAD/NAD(P)-binding domain superfamily BED33_03380 IPR023753 FAD/NAD(P)-binding domain BED33_03380 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily BED33_03380 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I BED33_03380 IPR022962 Soluble pyridine nucleotide transhydrogenase BED33_03385 IPR023764 Transcriptional repressor HTH, FabR BED33_03385 IPR009057 Homeobox-like domain superfamily BED33_03385 IPR001647 DNA-binding HTH domain, TetR-type BED33_03390 IPR009867 Protein of unknown function DUF1422 BED33_03395 IPR030390 RNA methyltransferase TrmA, active site BED33_03395 IPR030391 RNA methyltransferase TrmA, conserved site BED33_03395 IPR010280 (Uracil-5)-methyltransferase family BED33_03395 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED33_03395 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA BED33_03400 IPR010101 TonB-dependent vitamin B12 transporter BtuB BED33_03400 IPR012910 TonB-dependent receptor, plug domain BED33_03400 IPR039426 Vitamin B12 transporter BtuB-like BED33_03400 IPR000531 TonB-dependent receptor-like, beta-barrel BED33_03400 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BED33_03400 IPR010917 TonB-dependent receptor, conserved site BED33_03400 IPR037066 TonB-dependent receptor, plug domain superfamily BED33_03405 IPR015942 Asp/Glu/hydantoin racemase BED33_03405 IPR018187 Asp/Glu racemase, active site 1 BED33_03405 IPR001920 Asp/Glu racemase BED33_03405 IPR004391 Glutamate racemase BED33_03405 IPR033134 Asp/Glu racemase, active site 2 BED33_03445 IPR033893 ABC transporter periplasmic-binding protein YtfQ BED33_03445 IPR025997 Periplasmic binding protein BED33_03445 IPR028082 Periplasmic binding protein-like I BED33_03450 IPR017871 ABC transporter, conserved site BED33_03450 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_03450 IPR003593 AAA+ ATPase domain BED33_03450 IPR003439 ABC transporter-like BED33_03455 IPR001851 ABC transporter, permease BED33_03460 IPR001851 ABC transporter, permease BED33_03465 IPR036390 Winged helix DNA-binding domain superfamily BED33_03465 IPR000847 Transcription regulator HTH, LysR BED33_03465 IPR020890 Transcription regulator HTH, HdfR BED33_03465 IPR005119 LysR, substrate-binding BED33_03465 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_03470 IPR007335 Protein of unknown function DUF413 BED33_03475 IPR003593 AAA+ ATPase domain BED33_03475 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_03475 IPR020568 Ribosomal protein S5 domain 2-type fold BED33_03475 IPR000523 Magnesium chelatase ChlI domain BED33_03475 IPR004482 Mg chelatase-related protein BED33_03475 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BED33_03475 IPR025158 Mg chelatase-related protein, C-terminal domain BED33_03480 IPR012846 Acetolactate synthase, large subunit, biosynthetic BED33_03480 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding BED33_03480 IPR000399 TPP-binding enzyme, conserved site BED33_03480 IPR029035 DHS-like NAD/FAD-binding domain superfamily BED33_03480 IPR029061 Thiamin diphosphate-binding fold BED33_03480 IPR012000 Thiamine pyrophosphate enzyme, central domain BED33_03480 IPR039368 Acetolactate synthase large subunit, TPP binding domain BED33_03480 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain BED33_03485 IPR002912 ACT domain BED33_03490 IPR018300 Aminotransferase, class IV, conserved site BED33_03490 IPR001544 Aminotransferase class IV BED33_03490 IPR036038 Aminotransferase-like, PLP-dependent enzymes BED33_03490 IPR005785 Branched-chain amino acid aminotransferase I BED33_03490 IPR033939 Branched-chain aminotransferase BED33_03495 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site BED33_03495 IPR037237 IlvD/EDD, N-terminal domain BED33_03495 IPR042096 Dihydroxy-acid dehydratase, C-terminal BED33_03495 IPR004404 Dihydroxy-acid dehydratase BED33_03495 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase BED33_03500 IPR001926 Pyridoxal-phosphate dependent enzyme BED33_03500 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BED33_03500 IPR001721 Threonine dehydratase, ACT-like domain BED33_03500 IPR038110 Threonine dehydratase, ACT-like domain superfamily BED33_03500 IPR005787 Threonine dehydratase, biosynthetic BED33_03500 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site BED33_03515 IPR005119 LysR, substrate-binding BED33_03515 IPR037404 HTH-type transcriptional activator IlvY, PBP2 domain BED33_03515 IPR000847 Transcription regulator HTH, LysR BED33_03515 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_03515 IPR036390 Winged helix DNA-binding domain superfamily BED33_03520 IPR036291 NAD(P)-binding domain superfamily BED33_03520 IPR013116 Ketol-acid reductoisomerase, N-terminal BED33_03520 IPR000506 Ketol-acid reductoisomerase, C-terminal BED33_03520 IPR013023 Ketol-acid reductoisomerase BED33_03520 IPR013328 6-phosphogluconate dehydrogenase, domain 2 BED33_03520 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BED33_03530 IPR035900 Colicin E immunity protein superfamily BED33_03530 IPR000290 Colicin immunity protein/pyocin immunity protein BED33_03535 IPR000290 Colicin immunity protein/pyocin immunity protein BED33_03535 IPR035900 Colicin E immunity protein superfamily BED33_03545 IPR008962 PapD-like superfamily BED33_03545 IPR018046 Pili assembly chaperone, conserved site BED33_03545 IPR016148 Pili assembly chaperone, C-terminal BED33_03545 IPR001829 Pili assembly chaperone, bacterial BED33_03545 IPR036316 Pili assembly chaperone, C-terminal domain superfamily BED33_03545 IPR013783 Immunoglobulin-like fold BED33_03545 IPR016147 Pili assembly chaperone, N-terminal BED33_03565 IPR016148 Pili assembly chaperone, C-terminal BED33_03565 IPR036316 Pili assembly chaperone, C-terminal domain superfamily BED33_03565 IPR008962 PapD-like superfamily BED33_03565 IPR013783 Immunoglobulin-like fold BED33_03565 IPR001829 Pili assembly chaperone, bacterial BED33_03565 IPR016147 Pili assembly chaperone, N-terminal BED33_03565 IPR018046 Pili assembly chaperone, conserved site BED33_03570 IPR025959 Winged helix-turn helix domain BED33_03570 IPR038717 Tc1-like transposase, DDE domain BED33_03570 IPR012337 Ribonuclease H-like superfamily BED33_03570 IPR009057 Homeobox-like domain superfamily BED33_03580 IPR028082 Periplasmic binding protein-like I BED33_03580 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BED33_03580 IPR000843 LacI-type HTH domain BED33_03595 IPR009610 CbtA toxin of type IV toxin-antitoxin system BED33_03605 IPR001207 Transposase, mutator type BED33_03610 IPR022742 Serine aminopeptidase, S33 BED33_03610 IPR012354 Esterase/lipase BED33_03610 IPR029058 Alpha/Beta hydrolase fold BED33_03615 IPR012334 Pectin lyase fold BED33_03615 IPR025157 Hemagglutinin repeat BED33_03615 IPR011050 Pectin lyase fold/virulence factor BED33_03615 IPR024973 ESPR domain BED33_03615 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat BED33_03615 IPR008638 Filamentous haemagglutinin, N-terminal BED33_03615 IPR006914 VENN motif-containing domain BED33_03630 IPR011050 Pectin lyase fold/virulence factor BED33_03630 IPR006473 Peptidase C58, YopT-type domain BED33_03630 IPR003951 Peptidase C58, Yersinia/Haemophilus virulence surface antigen BED33_03630 IPR012334 Pectin lyase fold BED33_03630 IPR025157 Hemagglutinin repeat BED33_03630 IPR008638 Filamentous haemagglutinin, N-terminal BED33_03630 IPR040198 Fido domain-containing protein BED33_03630 IPR036597 Fido-like domain superfamily BED33_03630 IPR003812 Fido domain BED33_03630 IPR038765 Papain-like cysteine peptidase superfamily BED33_03630 IPR024973 ESPR domain BED33_03645 IPR007895 MASE1 BED33_03645 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BED33_03645 IPR003594 Histidine kinase/HSP90-like ATPase BED33_03645 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain BED33_03645 IPR005467 Histidine kinase domain BED33_03650 IPR016032 Signal transduction response regulator, C-terminal effector BED33_03650 IPR011006 CheY-like superfamily BED33_03650 IPR000792 Transcription regulator LuxR, C-terminal BED33_03650 IPR001789 Signal transduction response regulator, receiver domain BED33_03655 IPR000917 Sulfatase, N-terminal BED33_03655 IPR040423 Phosphoethanolamine transferase BED33_03655 IPR012549 Phosphoethanolamine transferase, N-terminal BED33_03655 IPR017850 Alkaline-phosphatase-like, core domain superfamily BED33_03660 IPR015946 K homology domain-like, alpha/beta BED33_03660 IPR019953 Organic hydroperoxide resistance protein famiy BED33_03660 IPR003718 OsmC/Ohr family BED33_03660 IPR036102 OsmC/Ohr superfamily BED33_03665 IPR003346 Transposase, IS116/IS110/IS902 BED33_03665 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED33_03670 IPR039424 Solute-binding protein family 5 BED33_03670 IPR023765 Solute-binding protein family 5, conserved site BED33_03670 IPR000914 Solute-binding protein family 5 domain BED33_03670 IPR030678 Peptide/nickel binding protein, MppA-type BED33_03675 IPR035906 MetI-like superfamily BED33_03675 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED33_03680 IPR025966 Oligopeptide transport permease C-like, N-terminal domain BED33_03680 IPR035906 MetI-like superfamily BED33_03680 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED33_03685 IPR017871 ABC transporter, conserved site BED33_03685 IPR003439 ABC transporter-like BED33_03685 IPR003593 AAA+ ATPase domain BED33_03685 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_03685 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal BED33_03690 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal BED33_03690 IPR003593 AAA+ ATPase domain BED33_03690 IPR003439 ABC transporter-like BED33_03690 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_03690 IPR017871 ABC transporter, conserved site BED33_03695 IPR017744 Cellulose biosynthesis protein BcsG BED33_03695 IPR017850 Alkaline-phosphatase-like, core domain superfamily BED33_03700 IPR019995 Cellulose biosynthesis, BcsF/YhjT BED33_03705 IPR017745 Cellulose biosynthesis protein BcsE BED33_03715 IPR017746 Cellulose synthase operon protein BcsQ BED33_03715 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_03720 IPR009875 PilZ domain BED33_03720 IPR029044 Nucleotide-diphospho-sugar transferases BED33_03720 IPR001173 Glycosyltransferase 2-like BED33_03720 IPR005150 Cellulose synthase BED33_03720 IPR003919 Cellulose synthase, subunit A BED33_03725 IPR008979 Galactose-binding-like domain superfamily BED33_03725 IPR018513 Cellulose synthase BcsB, bacterial BED33_03725 IPR003920 Cellulose synthase, subunit B BED33_03730 IPR008928 Six-hairpin glycosidase superfamily BED33_03730 IPR019834 Glycoside hydrolase, family 8, conserved site BED33_03730 IPR002037 Glycoside hydrolase, family 8 BED33_03730 IPR012341 Six-hairpin glycosidase-like superfamily BED33_03735 IPR019734 Tetratricopeptide repeat BED33_03735 IPR008410 Cellulose synthase operon C, C-terminal BED33_03735 IPR013026 Tetratricopeptide repeat-containing domain BED33_03735 IPR011990 Tetratricopeptide-like helical domain superfamily BED33_03745 IPR003660 HAMP domain BED33_03745 IPR001633 EAL domain BED33_03745 IPR035919 EAL domain superfamily BED33_03745 IPR033419 Gammaproteobacterial periplasmic sensor domain GAPES3 BED33_03745 IPR029787 Nucleotide cyclase BED33_03745 IPR000160 GGDEF domain BED33_03750 IPR009331 Oligogalacturonate-specific porin BED33_03755 IPR010702 Periplasmic pectate lyase BED33_03765 IPR036458 Sodium:dicarboxylate symporter superfamily BED33_03765 IPR018107 Sodium:dicarboxylate symporter, conserved site BED33_03765 IPR001991 Sodium:dicarboxylate symporter BED33_03765 IPR023954 C4-dicarboxylate transport protein BED33_03770 IPR011765 Peptidase M16, N-terminal BED33_03770 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like BED33_03770 IPR007863 Peptidase M16, C-terminal BED33_03775 IPR011611 Carbohydrate kinase PfkB BED33_03775 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site BED33_03775 IPR029056 Ribokinase-like BED33_03780 IPR004370 4-oxalocrotonate tautomerase BED33_03780 IPR014347 Tautomerase/MIF superfamily BED33_03780 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type BED33_03785 IPR035919 EAL domain superfamily BED33_03785 IPR001633 EAL domain BED33_03795 IPR036265 HIT-like superfamily BED33_03795 IPR038433 CDP-diacylglycerol pyrophosphatase superfamily BED33_03795 IPR003763 CDP-diacylglycerol pyrophosphatase BED33_03800 IPR005274 Inner membrane protein YhjD BED33_03800 IPR017039 Virulence factor BrkB BED33_03805 IPR012332 P22 tailspike-like, C-terminal domain superfamily BED33_03805 IPR006315 Outer membrane autotransporter barrel BED33_03805 IPR005546 Autotransporter beta-domain BED33_03805 IPR036709 Autotransporter beta-domain superfamily BED33_03805 IPR011050 Pectin lyase fold/virulence factor BED33_03810 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BED33_03810 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily BED33_03810 IPR006322 Glutathione reductase, eukaryote/bacterial BED33_03810 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I BED33_03810 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site BED33_03810 IPR023753 FAD/NAD(P)-binding domain BED33_03810 IPR036188 FAD/NAD(P)-binding domain superfamily BED33_03815 IPR002052 DNA methylase, N-6 adenine-specific, conserved site BED33_03815 IPR007473 Ribosomal RNA large subunit methyltransferase J BED33_03815 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED33_03820 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 BED33_03820 IPR001567 Peptidase M3A/M3B catalytic domain BED33_03825 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED33_03825 IPR007536 Ribosomal RNA small subunit methyltransferase J BED33_03830 IPR034033 Serralysin-like metallopeptidase domain BED33_03830 IPR006026 Peptidase, metallopeptidase BED33_03830 IPR013858 Peptidase M10 serralysin, C-terminal BED33_03830 IPR016294 Peptidase M10B BED33_03830 IPR001818 Peptidase M10, metallopeptidase BED33_03830 IPR024079 Metallopeptidase, catalytic domain superfamily BED33_03830 IPR001343 RTX calcium-binding nonapeptide repeat BED33_03830 IPR018511 Hemolysin-type calcium-binding conserved site BED33_03830 IPR011049 Serralysin-like metalloprotease, C-terminal BED33_03835 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase BED33_03835 IPR033922 NAD(P) binding domain of glutamate dehydrogenase BED33_03835 IPR014362 Glutamate dehydrogenase BED33_03835 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain BED33_03835 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal BED33_03835 IPR033524 Leu/Phe/Val dehydrogenases active site BED33_03835 IPR036291 NAD(P)-binding domain superfamily BED33_03840 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED33_03840 IPR006015 Universal stress protein A family BED33_03840 IPR006016 UspA BED33_03845 IPR003346 Transposase, IS116/IS110/IS902 BED33_03845 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED33_03850 IPR019598 Universal stress protein B BED33_03855 IPR001204 Phosphate transporter BED33_03860 IPR023166 HI0933-like insert domain superfamily BED33_03860 IPR036188 FAD/NAD(P)-binding domain superfamily BED33_03860 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like BED33_03865 IPR036390 Winged helix DNA-binding domain superfamily BED33_03865 IPR011856 tRNA endonuclease-like domain superfamily BED33_03865 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_03865 IPR014833 TnsA endonuclease, N-terminal BED33_03865 IPR011335 Restriction endonuclease type II-like BED33_03865 IPR014832 TnsA endonuclease C-terminal BED33_03875 IPR021542 Tn7 transposition regulator TnsC BED33_03875 IPR003593 AAA+ ATPase domain BED33_03875 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_03900 IPR036397 Ribonuclease H superfamily BED33_03900 IPR032874 DDE domain BED33_03900 IPR001584 Integrase, catalytic core BED33_03900 IPR012337 Ribonuclease H-like superfamily BED33_03905 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BED33_03905 IPR003959 ATPase, AAA-type, core BED33_03905 IPR015947 PUA-like superfamily BED33_03905 IPR027543 Lon protease, bacterial BED33_03905 IPR004815 Lon protease, bacterial/eukaryotic-type BED33_03905 IPR003593 AAA+ ATPase domain BED33_03905 IPR003111 Lon, substrate-binding domain BED33_03905 IPR027065 Lon protease BED33_03905 IPR008269 Peptidase S16, Lon proteolytic domain BED33_03905 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_03905 IPR020568 Ribosomal protein S5 domain 2-type fold BED33_03925 IPR018107 Sodium:dicarboxylate symporter, conserved site BED33_03925 IPR023954 C4-dicarboxylate transport protein BED33_03925 IPR001991 Sodium:dicarboxylate symporter BED33_03925 IPR036458 Sodium:dicarboxylate symporter superfamily BED33_03940 IPR006395 Methylaspartate ammonia-lyase BED33_03940 IPR022662 Methylaspartate ammonia-lyase, C-terminal BED33_03940 IPR022665 Methylaspartate ammonia-lyase, N-terminal BED33_03940 IPR029017 Enolase-like, N-terminal BED33_03940 IPR036849 Enolase-like, C-terminal domain superfamily BED33_03945 IPR014714 Glutamate mutase E subunit, C-terminal domain superfamily BED33_03945 IPR006396 Glutamate mutase epsilon subunit BED33_03945 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic BED33_03960 IPR006204 GHMP kinase N-terminal domain BED33_03960 IPR012363 Propanediol utilisation/coumermycin biosynthesis, PduX-related BED33_03960 IPR020568 Ribosomal protein S5 domain 2-type fold BED33_03960 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BED33_03965 IPR006367 Sirohaem synthase, N-terminal BED33_03965 IPR000878 Tetrapyrrole methylase BED33_03965 IPR035996 Tetrapyrrole methylase superfamily BED33_03965 IPR019478 Sirohaem synthase, dimerisation domain BED33_03965 IPR014777 Tetrapyrrole methylase, subdomain 1 BED33_03965 IPR014776 Tetrapyrrole methylase, subdomain 2 BED33_03965 IPR006366 Uroporphyrin-III C-methyltransferase BED33_03965 IPR036291 NAD(P)-binding domain superfamily BED33_03965 IPR037115 Sirohaem synthase, dimerisation domain superfamily BED33_03965 IPR012409 Sirohaem synthase BED33_03965 IPR028281 Siroheme synthase, central domain BED33_03965 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site BED33_03970 IPR000847 Transcription regulator HTH, LysR BED33_03970 IPR005119 LysR, substrate-binding BED33_03970 IPR036390 Winged helix DNA-binding domain superfamily BED33_03970 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_03975 IPR020557 Fumarate lyase, conserved site BED33_03975 IPR011167 Iron-dependent fumarate hydratase BED33_03975 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain BED33_03975 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain BED33_03975 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily BED33_03985 IPR000150 Cof family BED33_03985 IPR036412 HAD-like superfamily BED33_03985 IPR023214 HAD superfamily BED33_03985 IPR006379 HAD-superfamily hydrolase, subfamily IIB BED33_03995 IPR036390 Winged helix DNA-binding domain superfamily BED33_03995 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_03995 IPR000847 Transcription regulator HTH, LysR BED33_03995 IPR005119 LysR, substrate-binding BED33_04000 IPR036259 MFS transporter superfamily BED33_04000 IPR020846 Major facilitator superfamily domain BED33_04000 IPR011701 Major facilitator superfamily BED33_04005 IPR016160 Aldehyde dehydrogenase, cysteine active site BED33_04005 IPR016162 Aldehyde dehydrogenase, N-terminal BED33_04005 IPR016163 Aldehyde dehydrogenase, C-terminal BED33_04005 IPR010061 Methylmalonate-semialdehyde dehydrogenase BED33_04005 IPR015590 Aldehyde dehydrogenase domain BED33_04005 IPR016161 Aldehyde/histidinol dehydrogenase BED33_04010 IPR023770 5-deoxy-glucuronate isomerase, Bacilli BED33_04010 IPR024203 5-deoxy-glucuronate isomerase, IolB BED33_04010 IPR021120 KduI/IolB isomerase BED33_04010 IPR014710 RmlC-like jelly roll fold BED33_04010 IPR011051 RmlC-like cupin domain superfamily BED33_04020 IPR011611 Carbohydrate kinase PfkB BED33_04020 IPR022841 5-dehydro-2-deoxygluconokinase, Firmicutes BED33_04020 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site BED33_04020 IPR029056 Ribokinase-like BED33_04020 IPR023314 5-Dehydro-2-deoxygluconokinase-like superfamily BED33_04020 IPR030830 5-Dehydro-2-deoxygluconokinase BED33_04025 IPR030817 3,5/4-Trihydroxycyclohexa-1,2-dione hydrolase BED33_04025 IPR023757 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase, Firmicutes BED33_04025 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding BED33_04025 IPR000399 TPP-binding enzyme, conserved site BED33_04025 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain BED33_04025 IPR012000 Thiamine pyrophosphate enzyme, central domain BED33_04025 IPR029061 Thiamin diphosphate-binding fold BED33_04025 IPR029035 DHS-like NAD/FAD-binding domain superfamily BED33_04030 IPR004104 Oxidoreductase, C-terminal BED33_04030 IPR023794 Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase BED33_04030 IPR000683 Oxidoreductase, N-terminal BED33_04030 IPR036291 NAD(P)-binding domain superfamily BED33_04035 IPR013022 Xylose isomerase-like, TIM barrel domain BED33_04035 IPR023952 Inosose dehydratase BED33_04035 IPR036237 Xylose isomerase-like superfamily BED33_04035 IPR030823 IolE/MocC family BED33_04040 IPR000182 GNAT domain BED33_04040 IPR016181 Acyl-CoA N-acyltransferase BED33_04045 IPR011051 RmlC-like cupin domain superfamily BED33_04045 IPR014710 RmlC-like jelly roll fold BED33_04045 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain BED33_04045 IPR012093 Pirin BED33_04045 IPR003829 Pirin, N-terminal domain BED33_04050 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BED33_04050 IPR001761 Periplasmic binding protein/LacI sugar binding domain BED33_04050 IPR000843 LacI-type HTH domain BED33_04050 IPR028082 Periplasmic binding protein-like I BED33_04055 IPR003474 Gluconate transporter BED33_04060 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_04060 IPR006001 Carbohydrate kinase, thermoresistant glucokinase BED33_04060 IPR031322 Shikimate kinase/gluconokinase BED33_04065 IPR002771 Multiple antibiotic resistance (MarC)-related BED33_04070 IPR000534 Semialdehyde dehydrogenase, NAD-binding BED33_04070 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site BED33_04070 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type BED33_04070 IPR012080 Aspartate-semialdehyde dehydrogenase BED33_04070 IPR012280 Semialdehyde dehydrogenase, dimerisation domain BED33_04070 IPR036291 NAD(P)-binding domain superfamily BED33_04075 IPR012782 Acetolactate synthase, catabolic BED33_04075 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain BED33_04075 IPR012000 Thiamine pyrophosphate enzyme, central domain BED33_04075 IPR029061 Thiamin diphosphate-binding fold BED33_04075 IPR029035 DHS-like NAD/FAD-binding domain superfamily BED33_04075 IPR000399 TPP-binding enzyme, conserved site BED33_04075 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding BED33_04080 IPR005128 Alpha-acetolactate decarboxylase BED33_04085 IPR037410 HTH-type transcriptional regulator BudR, PBP2 domain BED33_04085 IPR005119 LysR, substrate-binding BED33_04085 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_04085 IPR036390 Winged helix DNA-binding domain superfamily BED33_04085 IPR000847 Transcription regulator HTH, LysR BED33_04090 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region BED33_04090 IPR010559 Signal transduction histidine kinase, internal region BED33_04090 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BED33_04090 IPR003018 GAF domain BED33_04095 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta BED33_04095 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB BED33_04095 IPR006047 Glycosyl hydrolase, family 13, catalytic domain BED33_04095 IPR004193 Glycoside hydrolase, family 13, N-terminal BED33_04095 IPR014756 Immunoglobulin E-set BED33_04095 IPR037439 1,4-alpha-glucan-branching enzyme BED33_04095 IPR013780 Glycosyl hydrolase, all-beta BED33_04095 IPR013783 Immunoglobulin-like fold BED33_04095 IPR017853 Glycoside hydrolase superfamily BED33_04100 IPR022844 Glycogen debranching enzyme, bacterial BED33_04100 IPR013780 Glycosyl hydrolase, all-beta BED33_04100 IPR006047 Glycosyl hydrolase, family 13, catalytic domain BED33_04100 IPR040784 Glycogen debranching enzyme, C-terminal domain BED33_04100 IPR013783 Immunoglobulin-like fold BED33_04100 IPR014756 Immunoglobulin E-set BED33_04100 IPR017853 Glycoside hydrolase superfamily BED33_04100 IPR004193 Glycoside hydrolase, family 13, N-terminal BED33_04100 IPR011837 Glycogen debranching enzyme, GlgX type BED33_04105 IPR029044 Nucleotide-diphospho-sugar transferases BED33_04105 IPR005835 Nucleotidyl transferase domain BED33_04105 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial BED33_04105 IPR005836 ADP-glucose pyrophosphorylase, conserved site BED33_04105 IPR011004 Trimeric LpxA-like superfamily BED33_04105 IPR011831 Glucose-1-phosphate adenylyltransferase BED33_04110 IPR013534 Starch synthase, catalytic domain BED33_04110 IPR011835 Bacterial/plant glycogen synthase BED33_04110 IPR001296 Glycosyl transferase, family 1 BED33_04115 IPR000811 Glycosyl transferase, family 35 BED33_04115 IPR035090 Phosphorylase pyridoxal-phosphate attachment site BED33_04115 IPR011833 Glycogen/starch/alpha-glucan phosphorylase BED33_04120 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase BED33_04120 IPR036188 FAD/NAD(P)-binding domain superfamily BED33_04120 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily BED33_04120 IPR031656 Alpha-glycerophosphate oxidase, C-terminal BED33_04120 IPR006076 FAD dependent oxidoreductase BED33_04130 IPR003346 Transposase, IS116/IS110/IS902 BED33_04130 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED33_04135 IPR037171 NagB/RpiA transferase-like BED33_04135 IPR001034 DeoR-type HTH domain BED33_04135 IPR014036 DeoR C-terminal sensor domain BED33_04135 IPR018356 Transcription regulator, HTH DeoR-type, conserved site BED33_04135 IPR036390 Winged helix DNA-binding domain superfamily BED33_04135 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_04140 IPR038236 GlpG peptidase, N-terminal domain superfamily BED33_04140 IPR022732 Peptidase S54, GlpG peptidase, N-terminal BED33_04140 IPR022764 Peptidase S54, rhomboid domain BED33_04140 IPR035952 Rhomboid-like superfamily BED33_04140 IPR023662 Rhomboid protease GlpG BED33_04145 IPR036873 Rhodanese-like domain superfamily BED33_04145 IPR001763 Rhodanese-like domain BED33_04145 IPR023695 Thiosulfate sulfurtransferase, bacterial BED33_04155 IPR023768 Transcriptional regulator HTH-type, MalT BED33_04155 IPR000792 Transcription regulator LuxR, C-terminal BED33_04155 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_04155 IPR041617 MalT-like TPR region BED33_04155 IPR011990 Tetratricopeptide-like helical domain superfamily BED33_04155 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_04155 IPR016032 Signal transduction response regulator, C-terminal effector BED33_04160 IPR000811 Glycosyl transferase, family 35 BED33_04160 IPR011833 Glycogen/starch/alpha-glucan phosphorylase BED33_04160 IPR035090 Phosphorylase pyridoxal-phosphate attachment site BED33_04165 IPR003385 Glycoside hydrolase, family 77 BED33_04165 IPR017853 Glycoside hydrolase superfamily BED33_04170 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal BED33_04170 IPR035903 HesB-like domain superfamily BED33_04170 IPR034904 Fe-S cluster assembly domain superfamily BED33_04170 IPR000361 FeS cluster biogenesis BED33_04170 IPR017726 Fe/S biogenesis protein NfuA BED33_04175 IPR029057 Phosphoribosyltransferase-like BED33_04175 IPR000836 Phosphoribosyltransferase domain BED33_04175 IPR005222 Competence protein ComF BED33_04180 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase BED33_04180 IPR029058 Alpha/Beta hydrolase fold BED33_04180 IPR000073 Alpha/beta hydrolase fold-1 BED33_04185 IPR036275 YdgH-like superfamily BED33_04185 IPR010854 Domain of unknown function DUF1471 BED33_04185 IPR025543 Dodecin-like BED33_04190 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED33_04190 IPR003346 Transposase, IS116/IS110/IS902 BED33_04195 IPR023732 Probable [Fe-S]-dependent transcriptional repressor BED33_04195 IPR015102 Transcriptional regulator HTH-type, FeoC BED33_04195 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_04195 IPR036390 Winged helix DNA-binding domain superfamily BED33_04200 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_04200 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain BED33_04200 IPR030389 FeoB-type guanine nucleotide-binding (G) domain BED33_04200 IPR041069 FeoB, cytosolic helical domain BED33_04200 IPR011640 Ferrous iron transport protein B, C-terminal BED33_04200 IPR003373 Ferrous iron transport protein B BED33_04205 IPR008988 Transcriptional repressor, C-terminal BED33_04205 IPR038157 Ferrous iron transporter, core domain BED33_04205 IPR007167 Ferrous iron transporter FeoA domain BED33_04210 IPR022967 RNA-binding domain, S1 BED33_04210 IPR003029 S1 domain BED33_04210 IPR023323 Tex-like domain superfamily BED33_04210 IPR023319 Tex-like protein, HTH domain superfamily BED33_04210 IPR010994 RuvA domain 2-like BED33_04210 IPR012337 Ribonuclease H-like superfamily BED33_04210 IPR012340 Nucleic acid-binding, OB-fold BED33_04210 IPR018974 Tex-like protein, N-terminal BED33_04210 IPR006641 YqgF/RNase H-like domain BED33_04210 IPR032639 Tex protein, YqgF-like domain BED33_04210 IPR037027 YqgF/RNase H-like domain superfamily BED33_04210 IPR041692 HHH domain 9 BED33_04235 IPR018151 Transcription elongation factor, GreA/GreB, conserved site BED33_04235 IPR006358 Transcription elongation factor GreB BED33_04235 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily BED33_04235 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal BED33_04235 IPR023459 Transcription elongation factor GreA/GreB family BED33_04235 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal BED33_04235 IPR028624 Transcription elongation factor GreA/GreB BED33_04235 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily BED33_04240 IPR001789 Signal transduction response regulator, receiver domain BED33_04240 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_04240 IPR039420 Transcriptional regulatory protein WalR-like BED33_04240 IPR016032 Signal transduction response regulator, C-terminal effector BED33_04240 IPR011006 CheY-like superfamily BED33_04240 IPR001867 OmpR/PhoB-type DNA-binding domain BED33_04245 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BED33_04245 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BED33_04245 IPR003660 HAMP domain BED33_04245 IPR003594 Histidine kinase/HSP90-like ATPase BED33_04245 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BED33_04245 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BED33_04245 IPR005467 Histidine kinase domain BED33_04250 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal BED33_04250 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal BED33_04250 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising BED33_04250 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site BED33_04255 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily BED33_04255 IPR000397 Heat shock protein Hsp33 BED33_04255 IPR016153 Heat shock protein Hsp33, N-terminal BED33_04255 IPR016154 Heat shock protein Hsp33, C-terminal BED33_04260 IPR036986 RNA-binding S4 domain superfamily BED33_04260 IPR002942 RNA-binding S4 domain BED33_04260 IPR025708 Heat shock protein 15 BED33_04265 IPR036412 HAD-like superfamily BED33_04265 IPR006439 HAD hydrolase, subfamily IA BED33_04265 IPR041492 Haloacid dehalogenase-like hydrolase BED33_04265 IPR023214 HAD superfamily BED33_04270 IPR010771 Intracellular growth attenuator IgaA BED33_04275 IPR000086 NUDIX hydrolase domain BED33_04275 IPR015797 NUDIX hydrolase-like domain superfamily BED33_04275 IPR020084 NUDIX hydrolase, conserved site BED33_04280 IPR012338 Beta-lactamase/transpeptidase-like BED33_04280 IPR001264 Glycosyl transferase, family 51 BED33_04280 IPR023346 Lysozyme-like domain superfamily BED33_04280 IPR036950 Penicillin binding protein transglycosylase domain BED33_04280 IPR001460 Penicillin-binding protein, transpeptidase BED33_04280 IPR031376 Penicillin-binding protein, OB-like domain BED33_04305 IPR001775 GspD/PilQ family BED33_04305 IPR004846 Type II/III secretion system BED33_04305 IPR004845 Type II secretion system GspD, conserved site BED33_04305 IPR005644 NolW-like BED33_04305 IPR011662 Secretin/TonB, short N-terminal domain BED33_04305 IPR038591 NolW-like superfamily BED33_04305 IPR013355 Type IV pilus secretin PilQ BED33_04310 IPR000623 Shikimate kinase/Threonine synthase-like 1 BED33_04310 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_04310 IPR031322 Shikimate kinase/gluconokinase BED33_04310 IPR023000 Shikimate kinase, conserved site BED33_04315 IPR016037 3-dehydroquinate synthase AroB BED33_04315 IPR030963 3-dehydroquinate synthase family BED33_04315 IPR030960 3-dehydroquinate synthase domain BED33_04320 IPR007730 Sporulation-like domain BED33_04320 IPR036680 Sporulation-like domain superfamily BED33_04325 IPR012327 D12 class N6 adenine-specific DNA methyltransferase BED33_04325 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED33_04325 IPR012263 Adenine modification methylase, M.EcoRV-type BED33_04325 IPR002052 DNA methylase, N-6 adenine-specific, conserved site BED33_04325 IPR023095 Adenine-specific methyltransferase, domain 2 BED33_04330 IPR011060 Ribulose-phosphate binding barrel BED33_04330 IPR026019 Ribulose-phosphate 3-epimerase BED33_04330 IPR013785 Aldolase-type TIM barrel BED33_04330 IPR000056 Ribulose-phosphate 3-epimerase-like BED33_04340 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site BED33_04340 IPR002305 Aminoacyl-tRNA synthetase, class Ic BED33_04340 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED33_04340 IPR002306 Tryptophan-tRNA ligase BED33_04340 IPR024109 Tryptophan-tRNA ligase, bacterial-type BED33_04345 IPR006367 Sirohaem synthase, N-terminal BED33_04345 IPR035996 Tetrapyrrole methylase superfamily BED33_04345 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site BED33_04345 IPR019478 Sirohaem synthase, dimerisation domain BED33_04345 IPR028281 Siroheme synthase, central domain BED33_04345 IPR012409 Sirohaem synthase BED33_04345 IPR037115 Sirohaem synthase, dimerisation domain superfamily BED33_04345 IPR036291 NAD(P)-binding domain superfamily BED33_04345 IPR000878 Tetrapyrrole methylase BED33_04345 IPR014777 Tetrapyrrole methylase, subdomain 1 BED33_04345 IPR006366 Uroporphyrin-III C-methyltransferase BED33_04345 IPR014776 Tetrapyrrole methylase, subdomain 2 BED33_04355 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily BED33_04355 IPR012748 Rieske-like [2Fe-2S] domain, NirD-type BED33_04355 IPR017881 Nitrite reductase (NADH) small subunit BED33_04360 IPR007419 BFD-like [2Fe-2S]-binding domain BED33_04360 IPR036188 FAD/NAD(P)-binding domain superfamily BED33_04360 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily BED33_04360 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain BED33_04360 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal BED33_04360 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily BED33_04360 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site BED33_04360 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB BED33_04360 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain BED33_04360 IPR017121 Nitrite reductase [NAD(P)H], large subunit BED33_04360 IPR023753 FAD/NAD(P)-binding domain BED33_04365 IPR032466 Metal-dependent hydrolase BED33_04365 IPR011059 Metal-dependent hydrolase, composite domain superfamily BED33_04365 IPR013108 Amidohydrolase 3 BED33_04370 IPR023528 Major facilitator superfamily transporter, TsgA BED33_04370 IPR036259 MFS transporter superfamily BED33_04370 IPR020846 Major facilitator superfamily domain BED33_04370 IPR011701 Major facilitator superfamily BED33_04375 IPR028082 Periplasmic binding protein-like I BED33_04375 IPR000843 LacI-type HTH domain BED33_04375 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BED33_04380 IPR019802 Glycoside hydrolase, family 4, conserved site BED33_04380 IPR036291 NAD(P)-binding domain superfamily BED33_04380 IPR001088 Glycoside hydrolase, family 4 BED33_04380 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal BED33_04380 IPR022616 Glycosyl hydrolase, family 4, C-terminal BED33_04385 IPR029000 Cyclophilin-like domain superfamily BED33_04385 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site BED33_04385 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain BED33_04390 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_04390 IPR033186 Helicase HerA-like C-terminal BED33_04395 IPR029062 Class I glutamine amidotransferase-like BED33_04395 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain BED33_04395 IPR017926 Glutamine amidotransferase BED33_04400 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED33_04400 IPR015424 Pyridoxal phosphate-dependent transferase BED33_04400 IPR005814 Aminotransferase class-III BED33_04400 IPR004636 Acetylornithine/Succinylornithine transaminase family BED33_04400 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED33_04400 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria BED33_04410 IPR014710 RmlC-like jelly roll fold BED33_04410 IPR012318 Crp-type HTH domain BED33_04410 IPR000595 Cyclic nucleotide-binding domain BED33_04410 IPR018335 Transcription regulator HTH, Crp-type, conserved site BED33_04410 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_04410 IPR018490 Cyclic nucleotide-binding-like BED33_04410 IPR036390 Winged helix DNA-binding domain superfamily BED33_04410 IPR018488 Cyclic nucleotide-binding, conserved site BED33_04415 IPR036102 OsmC/Ohr superfamily BED33_04415 IPR003718 OsmC/Ohr family BED33_04415 IPR015946 K homology domain-like, alpha/beta BED33_04420 IPR006083 Phosphoribulokinase/uridine kinase BED33_04420 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_04420 IPR006082 Phosphoribulokinase BED33_04425 IPR036685 YehU-like superfamily BED33_04425 IPR010648 Uncharacterised protein family UPF0270 BED33_04430 IPR000952 AB hydrolase 4, conserved site BED33_04430 IPR000073 Alpha/beta hydrolase fold-1 BED33_04430 IPR012020 AB hydrolase 4 family BED33_04430 IPR029058 Alpha/Beta hydrolase fold BED33_04435 IPR001123 Amino acid exporter protein, LeuE-type BED33_04440 IPR003719 Phenazine biosynthesis PhzF protein BED33_04445 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain BED33_04445 IPR010068 Taurine ABC transporter, substrate-binding protein TauA BED33_04445 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BED33_04455 IPR035906 MetI-like superfamily BED33_04455 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED33_04460 IPR042098 Taurine dioxygenase TauD-like superfamily BED33_04460 IPR003819 TauD/TfdA-like domain BED33_04470 IPR001173 Glycosyltransferase 2-like BED33_04470 IPR029044 Nucleotide-diphospho-sugar transferases BED33_04475 IPR032781 ABC-transporter extension domain BED33_04475 IPR003439 ABC transporter-like BED33_04475 IPR017871 ABC transporter, conserved site BED33_04475 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_04475 IPR003593 AAA+ ATPase domain BED33_04480 IPR029039 Flavoprotein-like superfamily BED33_04480 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG BED33_04480 IPR003680 Flavodoxin-like fold BED33_04485 IPR004771 K+/H+ exchanger BED33_04485 IPR038770 Sodium/solute symporter superfamily BED33_04485 IPR020884 Glutathione-regulated potassium-efflux system protein KefB BED33_04485 IPR036291 NAD(P)-binding domain superfamily BED33_04485 IPR006153 Cation/H+ exchanger BED33_04485 IPR003148 Regulator of K+ conductance, N-terminal BED33_04490 IPR012658 Conserved hypothetical protein CHP02443 BED33_04495 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain BED33_04500 IPR007236 SlyX BED33_04505 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily BED33_04505 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal BED33_04505 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain BED33_04510 IPR013559 YheO-like BED33_04510 IPR039445 Transcriptional regulator DauR-like, HTH domain BED33_04510 IPR039446 Transcriptional regulator DauR-like BED33_04515 IPR003787 Sulphur relay, DsrE/F-like protein BED33_04515 IPR027396 DsrEFH-like BED33_04515 IPR017463 Sulphur relay, TusD/DsrE BED33_04520 IPR003787 Sulphur relay, DsrE/F-like protein BED33_04520 IPR027396 DsrEFH-like BED33_04520 IPR037450 Sulphur relay, TusC BED33_04520 IPR017462 Sulphur relay, TusC/DsrF BED33_04525 IPR023526 Sulphur relay, TusB BED33_04525 IPR027396 DsrEFH-like BED33_04525 IPR007215 Sulphur relay, TusB/DsrH BED33_04530 IPR005679 Ribosomal protein S12, bacterial-type BED33_04530 IPR012340 Nucleic acid-binding, OB-fold BED33_04530 IPR006032 Ribosomal protein S12/S23 BED33_04535 IPR036823 Ribosomal protein S7 domain superfamily BED33_04535 IPR005717 Ribosomal protein S7, bacterial/organellar-type BED33_04535 IPR000235 Ribosomal protein S5/S7 BED33_04535 IPR020606 Ribosomal protein S7, conserved site BED33_04535 IPR023798 Ribosomal protein S7 domain BED33_04540 IPR020568 Ribosomal protein S5 domain 2-type fold BED33_04540 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_04540 IPR035647 EF-G domain III/V-like BED33_04540 IPR004540 Translation elongation factor EFG/EF2 BED33_04540 IPR004161 Translation elongation factor EFTu-like, domain 2 BED33_04540 IPR000640 Elongation factor EFG, domain V-like BED33_04540 IPR035649 EFG, domain V BED33_04540 IPR041095 Elongation Factor G, domain II BED33_04540 IPR005517 Translation elongation factor EFG/EF2, domain IV BED33_04540 IPR031157 Tr-type G domain, conserved site BED33_04540 IPR000795 Transcription factor, GTP-binding domain BED33_04540 IPR005225 Small GTP-binding protein domain BED33_04540 IPR009022 Elongation factor G, domain III BED33_04540 IPR009000 Translation protein, beta-barrel domain superfamily BED33_04540 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BED33_04550 IPR007419 BFD-like [2Fe-2S]-binding domain BED33_04550 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily BED33_04555 IPR009040 Ferritin-like diiron domain BED33_04555 IPR002024 Bacterioferritin BED33_04555 IPR008331 Ferritin/DPS protein domain BED33_04555 IPR012347 Ferritin-like BED33_04555 IPR009078 Ferritin-like superfamily BED33_04560 IPR027486 Ribosomal protein S10 domain BED33_04560 IPR018268 Ribosomal protein S10, conserved site BED33_04560 IPR001848 Ribosomal protein S10 BED33_04560 IPR036838 Ribosomal protein S10 domain superfamily BED33_04565 IPR000597 Ribosomal protein L3 BED33_04565 IPR019926 Ribosomal protein L3, conserved site BED33_04565 IPR019927 Ribosomal protein L3, bacterial/organelle-type BED33_04565 IPR009000 Translation protein, beta-barrel domain superfamily BED33_04570 IPR013005 50S ribosomal protein uL4 BED33_04570 IPR002136 Ribosomal protein L4/L1e BED33_04570 IPR023574 Ribosomal protein L4 domain superfamily BED33_04575 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily BED33_04575 IPR001014 Ribosomal protein L23/L25, conserved site BED33_04575 IPR013025 Ribosomal protein L25/L23 BED33_04575 IPR012678 Ribosomal protein L23/L15e core domain superfamily BED33_04580 IPR002171 Ribosomal protein L2 BED33_04580 IPR022671 Ribosomal protein L2, conserved site BED33_04580 IPR022669 Ribosomal protein L2, C-terminal BED33_04580 IPR005880 Ribosomal protein L2, bacterial/organellar-type BED33_04580 IPR012340 Nucleic acid-binding, OB-fold BED33_04580 IPR022666 Ribosomal Proteins L2, RNA binding domain BED33_04580 IPR014722 Ribosomal protein L2, domain 2 BED33_04580 IPR008991 Translation protein SH3-like domain superfamily BED33_04580 IPR014726 Ribosomal protein L2, domain 3 BED33_04585 IPR020934 Ribosomal protein S19 conserved site BED33_04585 IPR002222 Ribosomal protein S19/S15 BED33_04585 IPR005732 Ribosomal protein S19, bacterial-type BED33_04585 IPR023575 Ribosomal protein S19, superfamily BED33_04590 IPR001063 Ribosomal protein L22/L17 BED33_04590 IPR018260 Ribosomal protein L22/L17, conserved site BED33_04590 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type BED33_04590 IPR036394 Ribosomal protein L22/L17 superfamily BED33_04595 IPR004044 K Homology domain, type 2 BED33_04595 IPR015946 K homology domain-like, alpha/beta BED33_04595 IPR004087 K Homology domain BED33_04595 IPR036419 Ribosomal protein S3, C-terminal domain superfamily BED33_04595 IPR005704 Ribosomal protein S3, bacterial-type BED33_04595 IPR001351 Ribosomal protein S3, C-terminal BED33_04595 IPR018280 Ribosomal protein S3, conserved site BED33_04595 IPR009019 K homology domain superfamily, prokaryotic type BED33_04600 IPR000114 Ribosomal protein L16 BED33_04600 IPR036920 Ribosomal protein L10e/L16 superfamily BED33_04600 IPR020798 Ribosomal protein L16, conserved site BED33_04600 IPR016180 Ribosomal protein L10e/L16 BED33_04605 IPR001854 Ribosomal protein L29/L35 BED33_04605 IPR036049 Ribosomal protein L29/L35 superfamily BED33_04610 IPR019984 30S ribosomal protein S17 BED33_04610 IPR012340 Nucleic acid-binding, OB-fold BED33_04610 IPR019979 Ribosomal protein S17, conserved site BED33_04610 IPR000266 Ribosomal protein S17/S11 BED33_04615 IPR000218 Ribosomal protein L14P BED33_04615 IPR019972 Ribosomal protein L14P, conserved site BED33_04615 IPR005745 Ribosomal protein L14P, bacterial-type BED33_04615 IPR036853 Ribosomal protein L14 superfamily BED33_04620 IPR008991 Translation protein SH3-like domain superfamily BED33_04620 IPR003256 Ribosomal protein L24 BED33_04620 IPR014722 Ribosomal protein L2, domain 2 BED33_04620 IPR041988 Ribosomal Protein L26/L24, KOW domain BED33_04620 IPR005824 KOW BED33_04620 IPR005825 Ribosomal protein L24/L26, conserved site BED33_04625 IPR031310 Ribosomal protein L5, N-terminal BED33_04625 IPR022803 Ribosomal protein L5 domain superfamily BED33_04625 IPR002132 Ribosomal protein L5 BED33_04625 IPR031309 Ribosomal protein L5, C-terminal BED33_04625 IPR020930 Ribosomal protein L5, bacterial-type BED33_04630 IPR001209 Ribosomal protein S14 BED33_04630 IPR023036 Ribosomal protein S14, bacterial/plastid BED33_04630 IPR018271 Ribosomal protein S14, conserved site BED33_04635 IPR035987 Ribosomal protein S8 superfamily BED33_04635 IPR000630 Ribosomal protein S8 BED33_04640 IPR020040 Ribosomal protein L6, alpha-beta domain BED33_04640 IPR002358 Ribosomal protein L6, conserved site BED33_04640 IPR000702 Ribosomal protein L6 BED33_04640 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily BED33_04640 IPR019906 Ribosomal protein L6, bacterial-type BED33_04645 IPR004389 Ribosomal protein L18, bacterial-type BED33_04645 IPR005484 Ribosomal protein L18 BED33_04650 IPR005712 Ribosomal protein S5, bacterial-type BED33_04650 IPR018192 Ribosomal protein S5, N-terminal, conserved site BED33_04650 IPR005324 Ribosomal protein S5, C-terminal BED33_04650 IPR000851 Ribosomal protein S5 BED33_04650 IPR013810 Ribosomal protein S5, N-terminal BED33_04650 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BED33_04650 IPR020568 Ribosomal protein S5 domain 2-type fold BED33_04655 IPR018038 Ribosomal protein L30, conserved site BED33_04655 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain BED33_04655 IPR005996 Ribosomal protein L30, bacterial-type BED33_04655 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily BED33_04660 IPR030878 Ribosomal protein L15 BED33_04660 IPR021131 Ribosomal protein L18e/L15P BED33_04660 IPR001196 Ribosomal protein L15, conserved site BED33_04660 IPR005749 Ribosomal protein L15, bacterial-type BED33_04660 IPR036227 Ribosomal L18e/L15P superfamily BED33_04665 IPR026593 Protein translocase subunit SecY BED33_04665 IPR002208 SecY/SEC61-alpha family BED33_04665 IPR030659 SecY conserved site BED33_04665 IPR023201 SecY domain superfamily BED33_04670 IPR035977 Ribosomal protein L36 superfamily BED33_04670 IPR000473 Ribosomal protein L36 BED33_04680 IPR018102 Ribosomal S11, conserved site BED33_04680 IPR019981 Ribosomal protein S11, bacterial-type BED33_04680 IPR001971 Ribosomal protein S11 BED33_04680 IPR036967 Ribosomal protein S11 superfamily BED33_04685 IPR036986 RNA-binding S4 domain superfamily BED33_04685 IPR022801 Ribosomal protein S4/S9 BED33_04685 IPR001912 Ribosomal protein S4/S9, N-terminal BED33_04685 IPR005709 Ribosomal protein S4, bacterial-type BED33_04685 IPR018079 Ribosomal protein S4, conserved site BED33_04685 IPR002942 RNA-binding S4 domain BED33_04690 IPR011773 DNA-directed RNA polymerase, alpha subunit BED33_04690 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type BED33_04690 IPR011262 DNA-directed RNA polymerase, insert domain BED33_04690 IPR036603 RNA polymerase, RBP11-like subunit BED33_04690 IPR011260 RNA polymerase, alpha subunit, C-terminal BED33_04690 IPR036643 DNA-directed RNA polymerase, insert domain superfamily BED33_04695 IPR036373 Ribosomal protein L17 superfamily BED33_04695 IPR000456 Ribosomal protein L17 BED33_04700 IPR018961 DnaJ homologue, subfamily C, member 28, conserved domain BED33_04705 IPR009061 Putative DNA-binding domain superfamily BED33_04705 IPR000551 MerR-type HTH domain BED33_04705 IPR011788 Zn(II)-responsive transcriptional regulator BED33_04710 IPR005589 Alternative ribosome-rescue factor A BED33_04720 IPR036019 Gated mechanosensitive channel BED33_04720 IPR001185 Large-conductance mechanosensitive channel BED33_04720 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L BED33_04720 IPR019823 Large-conductance mechanosensitive channel, conserved site BED33_04725 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily BED33_04725 IPR003148 Regulator of K+ conductance, N-terminal BED33_04725 IPR006036 Potassium uptake protein TrkA BED33_04725 IPR006037 Regulator of K+ conductance, C-terminal BED33_04725 IPR036291 NAD(P)-binding domain superfamily BED33_04730 IPR035926 NusB-like superfamily BED33_04730 IPR023267 RNA (C5-cytosine) methyltransferase BED33_04730 IPR023541 rRNA small subunit methyltransferase B, enterobacteriaceae BED33_04730 IPR006027 NusB/RsmB/TIM44 BED33_04730 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED33_04730 IPR004573 rRNA small subunit methyltransferase B BED33_04730 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type BED33_04730 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site BED33_04735 IPR036477 Formyl transferase, N-terminal domain superfamily BED33_04735 IPR002376 Formyl transferase, N-terminal BED33_04735 IPR037022 Formyl transferase, C-terminal domain superfamily BED33_04735 IPR001555 Phosphoribosylglycinamide formyltransferase, active site BED33_04735 IPR005794 Methionyl-tRNA formyltransferase BED33_04735 IPR005793 Formyl transferase, C-terminal BED33_04735 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain BED33_04735 IPR011034 Formyl transferase-like, C-terminal domain superfamily BED33_04740 IPR023635 Peptide deformylase BED33_04740 IPR036821 Peptide deformylase superfamily BED33_04745 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_04745 IPR041614 DprA, winged helix domain BED33_04745 IPR003488 DNA recombination-mediator protein A BED33_04750 IPR007456 Smg BED33_04755 IPR013498 DNA topoisomerase, type IA, zn finger BED33_04755 IPR000380 DNA topoisomerase, type IA BED33_04760 IPR023535 Threonylcarbamoyl-AMP synthase BED33_04760 IPR006070 YrdC-like domain BED33_04760 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily BED33_04765 IPR036291 NAD(P)-binding domain superfamily BED33_04765 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal BED33_04765 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase BED33_04765 IPR011342 Shikimate dehydrogenase BED33_04765 IPR041121 SDH, C-terminal BED33_04765 IPR022893 Shikimate dehydrogenase family BED33_04770 IPR001451 Hexapeptide repeat BED33_04770 IPR011004 Trimeric LpxA-like superfamily BED33_04800 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED33_04800 IPR003346 Transposase, IS116/IS110/IS902 BED33_04805 IPR029062 Class I glutamine amidotransferase-like BED33_04805 IPR033752 MetA family BED33_04805 IPR005697 Homoserine O-succinyltransferase MetA BED33_04810 IPR011076 Malate synthase-like superfamily BED33_04810 IPR006252 Malate synthase A BED33_04810 IPR019830 Malate synthase, conserved site BED33_04810 IPR001465 Malate synthase BED33_04815 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily BED33_04815 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site BED33_04815 IPR006254 Isocitrate lyase BED33_04815 IPR039556 ICL/PEPM domain BED33_04815 IPR040442 Pyruvate kinase-like domain superfamily BED33_04820 IPR010452 Isocitrate dehydrogenase kinasephosphatase BED33_04825 IPR029016 GAF-like domain superfamily BED33_04825 IPR014757 Transcription regulator IclR, C-terminal BED33_04825 IPR036390 Winged helix DNA-binding domain superfamily BED33_04825 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_04825 IPR005471 Transcription regulator IclR, N-terminal BED33_04830 IPR011005 Dihydropteroate synthase-like BED33_04830 IPR003726 Homocysteine-binding domain BED33_04830 IPR006158 Cobalamin (vitamin B12)-binding domain BED33_04830 IPR033706 Methionine synthase, B12-binding domain BED33_04830 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain BED33_04830 IPR036724 Cobalamin-binding domain superfamily BED33_04830 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily BED33_04830 IPR004223 Vitamin B12-dependent methionine synthase, activation domain BED33_04830 IPR000489 Pterin-binding domain BED33_04830 IPR036594 Methionine synthase domain BED33_04830 IPR011822 Cobalamin-dependent methionine synthase BED33_04830 IPR036589 Homocysteine-binding domain superfamily BED33_04835 IPR011050 Pectin lyase fold/virulence factor BED33_04835 IPR012334 Pectin lyase fold BED33_04835 IPR025157 Hemagglutinin repeat BED33_04835 IPR008638 Filamentous haemagglutinin, N-terminal BED33_04840 IPR005565 Haemolysin activator HlyB, C-terminal BED33_04840 IPR027282 Two partner secretion pathway transporter BED33_04840 IPR013686 Polypeptide-transport-associated, ShlB-type BED33_04840 IPR035251 ShlB, POTRA domain BED33_04840 IPR034746 POTRA domain BED33_04845 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 BED33_04845 IPR004710 Bile acid:sodium symporter BED33_04845 IPR038770 Sodium/solute symporter superfamily BED33_04850 IPR001341 Aspartate kinase BED33_04850 IPR001048 Aspartate/glutamate/uridylate kinase BED33_04850 IPR005260 Aspartate kinase, monofunctional class BED33_04850 IPR002912 ACT domain BED33_04850 IPR041745 Lysine-sensitive aspartokinase 3, N-terminal catalytic domain BED33_04850 IPR018042 Aspartate kinase, conserved site BED33_04850 IPR036393 Acetylglutamate kinase-like superfamily BED33_04855 IPR035476 Phosphoglucose isomerase, SIS domain 1 BED33_04855 IPR001672 Phosphoglucose isomerase (PGI) BED33_04855 IPR018189 Phosphoglucose isomerase, conserved site BED33_04855 IPR035482 Phosphoglucose isomerase, SIS domain 2 BED33_04855 IPR023096 Phosphoglucose isomerase, C-terminal BED33_04860 IPR009315 Phosphate-starvation-induced PsiE BED33_04860 IPR020948 Phosphate-starvation-induced PsiE-like BED33_04865 IPR003346 Transposase, IS116/IS110/IS902 BED33_04865 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED33_04870 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED33_04870 IPR035906 MetI-like superfamily BED33_04880 IPR006061 Solute-binding family 1, conserved site BED33_04880 IPR006059 Bacterial extracellular solute-binding protein BED33_04880 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein BED33_04885 IPR003439 ABC transporter-like BED33_04885 IPR015855 ABC transporter, maltose/maltodextrin import, MalK BED33_04885 IPR017871 ABC transporter, conserved site BED33_04885 IPR003593 AAA+ ATPase domain BED33_04885 IPR008995 Molybdate/tungstate binding, C-terminal BED33_04885 IPR040582 MalK, OB fold domain BED33_04885 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_04890 IPR036998 Porin, LamB-type superfamily BED33_04890 IPR023738 Maltoporin BED33_04890 IPR003192 Porin, LamB-type BED33_04895 IPR010794 Maltose operon periplasmic BED33_04900 IPR011009 Protein kinase-like domain superfamily BED33_04905 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily BED33_04905 IPR007440 Chorismate--pyruvate lyase BED33_04910 IPR000537 UbiA prenyltransferase family BED33_04910 IPR039653 Prenyltransferase BED33_04910 IPR030470 UbiA prenyltransferase conserved site BED33_04910 IPR006370 4-hydroxybenzoate polyprenyltransferase-like BED33_04915 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase BED33_04915 IPR002123 Phospholipid/glycerol acyltransferase BED33_04915 IPR041728 GPAT/DHAPAT, acyltransferase domain BED33_04915 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB BED33_04920 IPR000829 DAGK family BED33_04920 IPR033718 Diacylglycerol kinase, prokaryotic BED33_04920 IPR036945 Diacylglycerol kinase (DAGK) superfamily BED33_04925 IPR006197 Peptidase S24, LexA-like BED33_04925 IPR015927 Peptidase S24/S26A/S26B/S26C BED33_04925 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_04925 IPR006199 LexA repressor, DNA-binding domain BED33_04925 IPR039418 LexA-like BED33_04925 IPR036390 Winged helix DNA-binding domain superfamily BED33_04925 IPR036286 LexA/Signal peptidase-like superfamily BED33_04925 IPR006200 Transcription regulator LexA BED33_04930 IPR036629 YjbJ superfamily BED33_04930 IPR008462 CsbD-like domain BED33_04930 IPR026042 Stress response protein YjbJ BED33_04935 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_04935 IPR036390 Winged helix DNA-binding domain superfamily BED33_04935 IPR002481 Ferric-uptake regulator BED33_04940 IPR036514 SGNH hydrolase superfamily BED33_04940 IPR002656 Acyltransferase 3 BED33_04945 IPR013785 Aldolase-type TIM barrel BED33_04945 IPR001269 tRNA-dihydrouridine synthase BED33_04945 IPR004653 tRNA-dihydrouridine(20/20a) synthase BED33_04945 IPR035587 DUS-like, FMN-binding domain BED33_04945 IPR018517 tRNA-dihydrouridine synthase, conserved site BED33_04950 IPR014318 Phage shock protein, PspG BED33_04960 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site BED33_04960 IPR011032 GroES-like superfamily BED33_04960 IPR020843 Polyketide synthase, enoylreductase domain BED33_04960 IPR036291 NAD(P)-binding domain superfamily BED33_04960 IPR013149 Alcohol dehydrogenase, C-terminal BED33_04960 IPR013154 Alcohol dehydrogenase, N-terminal BED33_04965 IPR007692 DNA helicase, DnaB type BED33_04965 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_04965 IPR003593 AAA+ ATPase domain BED33_04965 IPR007694 DNA helicase, DnaB-like, C-terminal BED33_04965 IPR007693 DNA helicase, DnaB-like, N-terminal BED33_04965 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal BED33_04965 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily BED33_04975 IPR004839 Aminotransferase, class I/classII BED33_04975 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site BED33_04975 IPR015424 Pyridoxal phosphate-dependent transferase BED33_04975 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED33_04975 IPR000796 Aspartate/other aminotransferase BED33_04975 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED33_04980 IPR007351 Uncharacterised protein YjbR BED33_04980 IPR038056 YjbR-like superfamily BED33_04985 IPR041552 UvrA DNA-binding domain BED33_04985 IPR004602 UvrABC system subunit A BED33_04985 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_04985 IPR017871 ABC transporter, conserved site BED33_04985 IPR003439 ABC transporter-like BED33_04985 IPR041102 UvrA, interaction domain BED33_04990 IPR011344 Single-stranded DNA-binding protein BED33_04990 IPR000424 Primosome PriB/single-strand DNA-binding BED33_04990 IPR012340 Nucleic acid-binding, OB-fold BED33_04995 IPR017508 HipA, N-terminal subdomain 1 BED33_04995 IPR012893 HipA-like, C-terminal BED33_05010 IPR006043 Xanthine/uracil/vitamin C permease BED33_05015 IPR006153 Cation/H+ exchanger BED33_05015 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria BED33_05015 IPR038770 Sodium/solute symporter superfamily BED33_05015 IPR018422 Cation/H+ exchanger, CPA1 family BED33_05020 IPR036390 Winged helix DNA-binding domain superfamily BED33_05020 IPR005119 LysR, substrate-binding BED33_05020 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_05020 IPR000847 Transcription regulator HTH, LysR BED33_05025 IPR023760 Holin-like protein CidA BED33_05025 IPR005538 LrgA/CidA family BED33_05035 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type BED33_05035 IPR017871 ABC transporter, conserved site BED33_05035 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_05035 IPR003439 ABC transporter-like BED33_05035 IPR003593 AAA+ ATPase domain BED33_05040 IPR035906 MetI-like superfamily BED33_05040 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain BED33_05040 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED33_05045 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED33_05045 IPR035906 MetI-like superfamily BED33_05045 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain BED33_05050 IPR018313 Solute-binding protein family 3, conserved site BED33_05050 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BED33_05060 IPR003346 Transposase, IS116/IS110/IS902 BED33_05060 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED33_05065 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase BED33_05065 IPR004960 Bacterial lipid A biosynthesis acyltransferase BED33_05065 IPR030857 Lipid A biosynthesis palmitoleoyltransferase, LpxP BED33_05070 IPR001898 Solute carrier family 13 BED33_05070 IPR030676 Citrate carrier CitT-related BED33_05075 IPR012340 Nucleic acid-binding, OB-fold BED33_05075 IPR011129 Cold shock domain BED33_05075 IPR002059 Cold-shock protein, DNA-binding BED33_05075 IPR012156 Cold shock, CspA BED33_05075 IPR019844 Cold-shock (CSD) domain BED33_05080 IPR002059 Cold-shock protein, DNA-binding BED33_05080 IPR012340 Nucleic acid-binding, OB-fold BED33_05080 IPR019844 Cold-shock (CSD) domain BED33_05080 IPR011129 Cold shock domain BED33_05080 IPR012156 Cold shock, CspA BED33_05085 IPR008816 Glycine zipper 2TM domain BED33_05095 IPR002197 DNA binding HTH domain, Fis-type BED33_05095 IPR009057 Homeobox-like domain superfamily BED33_05095 IPR005412 DNA-binding protein Fis BED33_05100 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal BED33_05100 IPR035587 DUS-like, FMN-binding domain BED33_05100 IPR032887 tRNA-dihydrouridine synthase B BED33_05100 IPR013785 Aldolase-type TIM barrel BED33_05100 IPR018517 tRNA-dihydrouridine synthase, conserved site BED33_05100 IPR001269 tRNA-dihydrouridine synthase BED33_05100 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 BED33_05105 IPR004498 Ribosomal protein L11 methyltransferase BED33_05105 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED33_05110 IPR038377 Sodium/glucose symporter superfamily BED33_05110 IPR001734 Sodium/solute symporter BED33_05110 IPR018212 Sodium/solute symporter, conserved site BED33_05110 IPR011849 Sodium/pantothenate symporter BED33_05115 IPR010398 Protein of unknown function DUF997 BED33_05120 IPR013815 ATP-grasp fold, subdomain 1 BED33_05120 IPR011054 Rudiment single hybrid motif BED33_05120 IPR016185 Pre-ATP-grasp domain superfamily BED33_05120 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain BED33_05120 IPR011761 ATP-grasp fold BED33_05120 IPR005481 Biotin carboxylase-like, N-terminal domain BED33_05120 IPR011764 Biotin carboxylation domain BED33_05120 IPR005482 Biotin carboxylase, C-terminal BED33_05120 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase BED33_05125 IPR000089 Biotin/lipoyl attachment BED33_05125 IPR011053 Single hybrid motif BED33_05125 IPR001249 Acetyl-CoA biotin carboxyl carrier BED33_05125 IPR001882 Biotin-binding site BED33_05130 IPR036441 Dehydroquinase, class II superfamily BED33_05130 IPR001874 Dehydroquinase, class II BED33_05130 IPR018509 Dehydroquinase, class II, conserved site BED33_05135 IPR013130 Ferric reductase transmembrane component-like domain BED33_05135 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ BED33_05140 IPR000572 Oxidoreductase, molybdopterin-binding domain BED33_05140 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP BED33_05140 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily BED33_05145 IPR036291 NAD(P)-binding domain superfamily BED33_05145 IPR011032 GroES-like superfamily BED33_05145 IPR020843 Polyketide synthase, enoylreductase domain BED33_05145 IPR013154 Alcohol dehydrogenase, N-terminal BED33_05145 IPR014188 Acrylyl-CoA reductase AcuI BED33_05145 IPR013149 Alcohol dehydrogenase, C-terminal BED33_05150 IPR029787 Nucleotide cyclase BED33_05150 IPR001633 EAL domain BED33_05150 IPR035919 EAL domain superfamily BED33_05150 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 BED33_05150 IPR000160 GGDEF domain BED33_05155 IPR004753 Cell shape determining protein MreB BED33_05160 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 BED33_05160 IPR007221 Rod shape-determining protein MreC BED33_05160 IPR042177 Cell/Rod shape-determining protein MreC, domain 1 BED33_05165 IPR007227 Cell shape-determining protein MreD BED33_05165 IPR026034 Cell shape-determining protein MreD, proteobacterial type BED33_05170 IPR029001 Inosine triphosphate pyrophosphatase-like BED33_05170 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein BED33_05175 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G BED33_05175 IPR004659 Ribonuclease E/G BED33_05175 IPR022967 RNA-binding domain, S1 BED33_05175 IPR003029 S1 domain BED33_05175 IPR012340 Nucleic acid-binding, OB-fold BED33_05180 IPR032712 AsmA-like, C-terminal BED33_05180 IPR011836 Conserved hypothetical protein CHP02099 BED33_05180 IPR025263 Domain of unknown function DUF3971 BED33_05185 IPR036526 Carbon-nitrogen hydrolase superfamily BED33_05185 IPR001110 Uncharacterised protein family UPF0012, conserved site BED33_05185 IPR003010 Carbon-nitrogen hydrolase BED33_05190 IPR002510 Metalloprotease TldD/PmbA BED33_05190 IPR025502 TldD BED33_05190 IPR036059 Metalloprotease TldD/PmbA superfamily BED33_05190 IPR035068 Metalloprotease TldD/PmbA, N-terminal BED33_05225 IPR022045 Insecticide toxin TcdB middle/N-terminal BED33_05225 IPR003284 Salmonella virulence plasmid 65kDa B protein BED33_05225 IPR022044 Insecticide toxin TcdB middle/C-terminal BED33_05230 IPR041079 Neuraminidase-like domain BED33_05230 IPR040840 Tc toxin complex TcA, C-terminal TcB-binding domain BED33_05245 IPR000847 Transcription regulator HTH, LysR BED33_05245 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_05245 IPR005119 LysR, substrate-binding BED33_05245 IPR036390 Winged helix DNA-binding domain superfamily BED33_05250 IPR012451 Protein of unknown function DUF1656 BED33_05255 IPR006143 RND efflux pump, membrane fusion protein BED33_05255 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA BED33_05255 IPR039562 Membrane fusion protein, biotin-lipoyl like domain BED33_05260 IPR023706 Para-hydroxybenzoic acid efflux pump, subunit AaeB BED33_05260 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein BED33_05265 IPR016163 Aldehyde dehydrogenase, C-terminal BED33_05265 IPR016160 Aldehyde dehydrogenase, cysteine active site BED33_05265 IPR010102 Succinate semialdehyde dehydrogenase BED33_05265 IPR015590 Aldehyde dehydrogenase domain BED33_05265 IPR029510 Aldehyde dehydrogenase, glutamic acid active site BED33_05265 IPR016162 Aldehyde dehydrogenase, N-terminal BED33_05265 IPR016161 Aldehyde/histidinol dehydrogenase BED33_05275 IPR035905 Barstar-like superfamily BED33_05275 IPR000468 Barstar (barnase inhibitor) BED33_05280 IPR006839 Ribosome-associated, YjgA BED33_05280 IPR023153 PSPTO4464-like domain superfamily BED33_05285 IPR011010 DNA breaking-rejoining enzyme, catalytic core BED33_05285 IPR023009 Tyrosine recombinase XerC/XerD BED33_05285 IPR004107 Integrase, SAM-like, N-terminal BED33_05285 IPR010998 Integrase/recombinase, N-terminal BED33_05285 IPR002104 Integrase, catalytic domain BED33_05285 IPR013762 Integrase-like, catalytic domain superfamily BED33_05315 IPR023095 Adenine-specific methyltransferase, domain 2 BED33_05315 IPR002052 DNA methylase, N-6 adenine-specific, conserved site BED33_05315 IPR012263 Adenine modification methylase, M.EcoRV-type BED33_05315 IPR012327 D12 class N6 adenine-specific DNA methyltransferase BED33_05315 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED33_05325 IPR008766 Replication gene A protein BED33_05460 IPR002510 Metalloprotease TldD/PmbA BED33_05460 IPR036059 Metalloprotease TldD/PmbA superfamily BED33_05460 IPR035068 Metalloprotease TldD/PmbA, N-terminal BED33_05465 IPR003346 Transposase, IS116/IS110/IS902 BED33_05465 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED33_05470 IPR009155 Cytochrome b562 BED33_05470 IPR010980 Cytochrome c/b562 BED33_05475 IPR023459 Transcription elongation factor GreA/GreB family BED33_05475 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal BED33_05475 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain BED33_05475 IPR028625 Regulator of nucleoside diphosphate kinase BED33_05475 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily BED33_05505 IPR011059 Metal-dependent hydrolase, composite domain superfamily BED33_05505 IPR032466 Metal-dependent hydrolase BED33_05505 IPR020043 Deacetylase Atu3266-like BED33_05505 IPR006680 Amidohydrolase-related BED33_05510 IPR018319 L-seryl-tRNA selenium transferase-like BED33_05510 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED33_05510 IPR015424 Pyridoxal phosphate-dependent transferase BED33_05510 IPR006337 D-glucosaminate-6-phosphate ammonia lyase DgaE-like BED33_05515 IPR010763 2-dehydro-3-deoxy-phosphogluconate aldolase BED33_05515 IPR013785 Aldolase-type TIM barrel BED33_05525 IPR013196 Helix-turn-helix, type 11 BED33_05525 IPR007737 Mga helix-turn-helix domain BED33_05525 IPR011608 PRD domain BED33_05525 IPR036634 PRD domain superfamily BED33_05525 IPR016152 Phosphotransferase/anion transporter BED33_05525 IPR002178 PTS EIIA type-2 domain BED33_05525 IPR036095 PTS system IIB component-like superfamily BED33_05525 IPR013011 Phosphotransferase system, EIIB component, type 2 BED33_05525 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_05525 IPR036390 Winged helix DNA-binding domain superfamily BED33_05530 IPR013430 Toxin-antitoxin system, antidote protein, HigA BED33_05530 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BED33_05530 IPR001387 Cro/C1-type helix-turn-helix domain BED33_05535 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily BED33_05535 IPR007711 Toxin HigB-1 BED33_05545 IPR028082 Periplasmic binding protein-like I BED33_05545 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BED33_05545 IPR012771 Trehalose operon repressor BED33_05545 IPR000843 LacI-type HTH domain BED33_05555 IPR012769 Trehalose-6-phosphate hydrolase BED33_05555 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) BED33_05555 IPR017853 Glycoside hydrolase superfamily BED33_05555 IPR006047 Glycosyl hydrolase, family 13, catalytic domain BED33_05555 IPR013780 Glycosyl hydrolase, all-beta BED33_05570 IPR025841 Circularly permuted ATP-grasp type 2 BED33_05570 IPR007296 Domain of unknown function DUF403 BED33_05575 IPR016450 Uncharacterised conserved protein UCP005522 BED33_05575 IPR025841 Circularly permuted ATP-grasp type 2 BED33_05580 IPR006175 YjgF/YER057c/UK114 family BED33_05580 IPR006056 RidA family BED33_05580 IPR035959 RutC-like superfamily BED33_05580 IPR019897 RidA, conserved site BED33_05585 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal BED33_05585 IPR002801 Aspartate transcarbamylase regulatory subunit BED33_05585 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily BED33_05585 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily BED33_05585 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal BED33_05590 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain BED33_05590 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding BED33_05590 IPR006130 Aspartate/ornithine carbamoyltransferase BED33_05590 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily BED33_05590 IPR002082 Aspartate carbamoyltransferase BED33_05595 IPR035895 HPr-like superfamily BED33_05595 IPR002114 Phosphotransferase system, HPr serine phosphorylation site BED33_05595 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site BED33_05595 IPR000032 Phosphocarrier protein HPr-like BED33_05600 IPR005337 RapZ-like family BED33_05600 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_05605 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN BED33_05605 IPR016152 Phosphotransferase/anion transporter BED33_05605 IPR002178 PTS EIIA type-2 domain BED33_05610 IPR003489 Ribosome hibernation promoting factor/RaiA BED33_05610 IPR036567 Ribosome hibernation promotion factor-like BED33_05615 IPR007046 RNA polymerase sigma factor 54, core-binding domain BED33_05615 IPR007634 RNA polymerase sigma factor 54, DNA-binding BED33_05615 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily BED33_05615 IPR000394 RNA polymerase sigma factor 54 BED33_05620 IPR003593 AAA+ ATPase domain BED33_05620 IPR017871 ABC transporter, conserved site BED33_05620 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_05620 IPR003439 ABC transporter-like BED33_05620 IPR030921 LPS export ABC transporter, ATP-binding protein LptB BED33_05620 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal BED33_05625 IPR005653 Organic solvent tolerance-like, N-terminal BED33_05625 IPR014340 Lipopolysaccharide export system protein LptA BED33_05630 IPR010664 Lipopolysaccharide assembly, LptC-related BED33_05630 IPR026265 Lipopolysaccharide export system protein LptC BED33_05635 IPR010023 KdsC family BED33_05635 IPR023214 HAD superfamily BED33_05635 IPR036412 HAD-like superfamily BED33_05640 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type BED33_05640 IPR001347 Sugar isomerase (SIS) BED33_05640 IPR000644 CBS domain BED33_05640 IPR035474 KpsF-like, SIS domain BED33_05650 IPR003593 AAA+ ATPase domain BED33_05650 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_05650 IPR003439 ABC transporter-like BED33_05650 IPR017871 ABC transporter, conserved site BED33_05650 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl BED33_05655 IPR003453 ABC transport permease subunit MlaE, Proteobacteria BED33_05655 IPR030802 ABC transporter permease MalE BED33_05660 IPR003399 Mce/MlaD BED33_05660 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD BED33_05665 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC BED33_05665 IPR042245 Tgt2/MlaC superfamily BED33_05670 IPR036513 STAS domain superfamily BED33_05670 IPR002645 STAS domain BED33_05675 IPR002634 BolA protein BED33_05675 IPR036065 BolA-like superfamily BED33_05680 IPR036968 Enolpyruvate transferase domain superfamily BED33_05680 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase BED33_05680 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta BED33_05680 IPR001986 Enolpyruvate transferase domain BED33_05685 IPR036034 PDZ superfamily BED33_05685 IPR011783 Peptidase S1C, DegS BED33_05685 IPR001940 Peptidase S1C BED33_05685 IPR001478 PDZ domain BED33_05685 IPR009003 Peptidase S1, PA clan BED33_05690 IPR009003 Peptidase S1, PA clan BED33_05690 IPR011782 Peptidase S1C, Do BED33_05690 IPR036034 PDZ superfamily BED33_05690 IPR001478 PDZ domain BED33_05690 IPR001940 Peptidase S1C BED33_05695 IPR009386 Protein of unknown function DUF1043 BED33_05700 IPR030870 Cell division protein ZapE BED33_05700 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_05700 IPR005654 ATPase, AFG1-like BED33_05705 IPR023563 Ribosomal protein L13, conserved site BED33_05705 IPR036899 Ribosomal protein L13 superfamily BED33_05705 IPR005822 Ribosomal protein L13 BED33_05705 IPR005823 Ribosomal protein L13, bacterial-type BED33_05710 IPR020568 Ribosomal protein S5 domain 2-type fold BED33_05710 IPR000754 Ribosomal protein S9 BED33_05710 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BED33_05710 IPR023035 Ribosomal protein S9, bacterial/plastid BED33_05710 IPR020574 Ribosomal protein S9, conserved site BED33_05715 IPR010987 Glutathione S-transferase, C-terminal-like BED33_05715 IPR004045 Glutathione S-transferase, N-terminal BED33_05715 IPR036249 Thioredoxin-like superfamily BED33_05715 IPR036282 Glutathione S-transferase, C-terminal domain superfamily BED33_05715 IPR040079 Glutathione Transferase family BED33_05715 IPR004046 Glutathione S-transferase, C-terminal BED33_05715 IPR034341 Stringent starvation protein A, N-terminal BED33_05720 IPR036760 SspB-like superfamily BED33_05720 IPR007481 Stringent starvation protein B BED33_05735 IPR023753 FAD/NAD(P)-binding domain BED33_05735 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 BED33_05735 IPR009051 Alpha-helical ferredoxin BED33_05735 IPR028261 Dihydroprymidine dehydrogenase domain II BED33_05735 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BED33_05735 IPR036188 FAD/NAD(P)-binding domain superfamily BED33_05740 IPR017932 Glutamine amidotransferase type 2 domain BED33_05740 IPR013785 Aldolase-type TIM barrel BED33_05740 IPR002489 Glutamate synthase, alpha subunit, C-terminal BED33_05740 IPR006982 Glutamate synthase, central-N BED33_05740 IPR002932 Glutamate synthase domain BED33_05740 IPR029055 Nucleophile aminohydrolases, N-terminal BED33_05740 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily BED33_05745 IPR032432 Radical SAM, C-terminal extension BED33_05745 IPR005911 Protein YhcC-like BED33_05745 IPR039661 ELP3/YhcC BED33_05745 IPR023404 Radical SAM, alpha/beta horseshoe BED33_05745 IPR007197 Radical SAM BED33_05745 IPR006638 Elp3/MiaB/NifB BED33_05750 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily BED33_05750 IPR011006 CheY-like superfamily BED33_05750 IPR003594 Histidine kinase/HSP90-like ATPase BED33_05750 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BED33_05750 IPR005467 Histidine kinase domain BED33_05750 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB BED33_05750 IPR001789 Signal transduction response regulator, receiver domain BED33_05750 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BED33_05750 IPR013767 PAS fold BED33_05750 IPR035965 PAS domain superfamily BED33_05750 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain BED33_05750 IPR000014 PAS domain BED33_05750 IPR036641 HPT domain superfamily BED33_05750 IPR040642 Histidine kinase receptor ArcB, transmembrane domain BED33_05750 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BED33_05750 IPR000700 PAS-associated, C-terminal BED33_05750 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BED33_05755 IPR029062 Class I glutamine amidotransferase-like BED33_05755 IPR026041 Glyoxalase ElbB BED33_05760 IPR036950 Penicillin binding protein transglycosylase domain BED33_05760 IPR011812 Biosynthetic peptidoglycan transglycosylase BED33_05760 IPR001264 Glycosyl transferase, family 51 BED33_05760 IPR023346 Lysozyme-like domain superfamily BED33_05765 IPR007055 BON domain BED33_05765 IPR014004 Transport-associated and nodulation domain, bacteria BED33_05770 IPR023070 DnaA initiator-associating protein BED33_05770 IPR001347 Sugar isomerase (SIS) BED33_05770 IPR035461 GmhA/DiaA BED33_05775 IPR011856 tRNA endonuclease-like domain superfamily BED33_05775 IPR011335 Restriction endonuclease type II-like BED33_05775 IPR003509 Uncharacterised protein family UPF0102 BED33_05780 IPR028082 Periplasmic binding protein-like I BED33_05780 IPR007443 Penicillin-binding protein activator LpoA BED33_05780 IPR011990 Tetratricopeptide-like helical domain superfamily BED33_05785 IPR000878 Tetrapyrrole methylase BED33_05785 IPR008189 rRNA small subunit methyltransferase I BED33_05785 IPR018063 SAM-dependent methyltransferase RsmI, conserved site BED33_05785 IPR014776 Tetrapyrrole methylase, subdomain 2 BED33_05785 IPR014777 Tetrapyrrole methylase, subdomain 1 BED33_05785 IPR035996 Tetrapyrrole methylase superfamily BED33_05805 IPR006120 Resolvase, HTH domain BED33_05805 IPR006119 Resolvase, N-terminal catalytic domain BED33_05805 IPR006118 Recombinase, conserved site BED33_05805 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily BED33_05805 IPR009057 Homeobox-like domain superfamily BED33_05815 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED33_05815 IPR001525 C-5 cytosine methyltransferase BED33_05815 IPR018117 DNA methylase, C-5 cytosine-specific, active site BED33_05825 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BED33_05825 IPR001387 Cro/C1-type helix-turn-helix domain BED33_05840 IPR036316 Pili assembly chaperone, C-terminal domain superfamily BED33_05840 IPR018046 Pili assembly chaperone, conserved site BED33_05840 IPR013783 Immunoglobulin-like fold BED33_05840 IPR008962 PapD-like superfamily BED33_05840 IPR016148 Pili assembly chaperone, C-terminal BED33_05840 IPR001829 Pili assembly chaperone, bacterial BED33_05840 IPR016147 Pili assembly chaperone, N-terminal BED33_05845 IPR018030 Fimbrial membrane usher, conserved site BED33_05845 IPR037224 PapC, N-terminal domain superfamily BED33_05845 IPR000015 Outer membrane usher protein BED33_05845 IPR025885 PapC, N-terminal domain BED33_05845 IPR025949 PapC-like, C-terminal domain BED33_05845 IPR042186 Outer membrane usher protein FimD, plug domain BED33_05855 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_05855 IPR000847 Transcription regulator HTH, LysR BED33_05855 IPR005119 LysR, substrate-binding BED33_05855 IPR036390 Winged helix DNA-binding domain superfamily BED33_05860 IPR023210 NADP-dependent oxidoreductase domain BED33_05860 IPR036812 NADP-dependent oxidoreductase domain superfamily BED33_05860 IPR020471 Aldo/keto reductase BED33_05865 IPR020843 Polyketide synthase, enoylreductase domain BED33_05865 IPR013149 Alcohol dehydrogenase, C-terminal BED33_05865 IPR013154 Alcohol dehydrogenase, N-terminal BED33_05865 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site BED33_05865 IPR011032 GroES-like superfamily BED33_05865 IPR036291 NAD(P)-binding domain superfamily BED33_05870 IPR011051 RmlC-like cupin domain superfamily BED33_05870 IPR014710 RmlC-like jelly roll fold BED33_05870 IPR012093 Pirin BED33_05870 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain BED33_05870 IPR003829 Pirin, N-terminal domain BED33_05875 IPR005119 LysR, substrate-binding BED33_05875 IPR000847 Transcription regulator HTH, LysR BED33_05875 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_05875 IPR036390 Winged helix DNA-binding domain superfamily BED33_05880 IPR004045 Glutathione S-transferase, N-terminal BED33_05880 IPR040079 Glutathione Transferase family BED33_05880 IPR010987 Glutathione S-transferase, C-terminal-like BED33_05880 IPR036249 Thioredoxin-like superfamily BED33_05880 IPR016639 Glutathione S-transferase Omega/GSH BED33_05880 IPR036282 Glutathione S-transferase, C-terminal domain superfamily BED33_05885 IPR032808 DoxX family BED33_05890 IPR025612 YqjK-like protein BED33_05895 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III BED33_05900 IPR010279 Inner membrane protein YqjD/ElaB BED33_05910 IPR026574 Modulator protein MzrA BED33_05910 IPR027398 SecD export protein N-terminal TM domain BED33_05915 IPR032818 DedA family BED33_05915 IPR032816 SNARE associated Golgi protein BED33_05925 IPR008920 Transcription regulator FadR/GntR, C-terminal BED33_05925 IPR000524 Transcription regulator HTH, GntR BED33_05925 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_05925 IPR011711 GntR, C-terminal BED33_05925 IPR036390 Winged helix DNA-binding domain superfamily BED33_05930 IPR036259 MFS transporter superfamily BED33_05930 IPR011701 Major facilitator superfamily BED33_05930 IPR020846 Major facilitator superfamily domain BED33_05935 IPR032466 Metal-dependent hydrolase BED33_05935 IPR003766 Uronate isomerase BED33_05940 IPR013131 Mannitol dehydrogenase, N-terminal BED33_05940 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BED33_05940 IPR013328 6-phosphogluconate dehydrogenase, domain 2 BED33_05940 IPR023668 Altronate oxidoreductase BED33_05940 IPR013118 Mannitol dehydrogenase, C-terminal BED33_05940 IPR036291 NAD(P)-binding domain superfamily BED33_05945 IPR007392 D-galactarate/Altronate dehydratase, C-terminal BED33_05945 IPR013974 SAF domain BED33_05950 IPR019629 Uncharacterised protein family HI1736/YgjV BED33_05950 IPR026267 Inner membrane protein YgjV BED33_05955 IPR023025 Serine/threonine transporter SstT BED33_05955 IPR036458 Sodium:dicarboxylate symporter superfamily BED33_05955 IPR001991 Sodium:dicarboxylate symporter BED33_05960 IPR005496 Integral membrane protein TerC BED33_05960 IPR022369 Integral membrane protein TerC, riboswitch-linked BED33_05970 IPR036291 NAD(P)-binding domain superfamily BED33_05970 IPR000683 Oxidoreductase, N-terminal BED33_05975 IPR002725 Protein of unknown function DUF45 BED33_05990 IPR011050 Pectin lyase fold/virulence factor BED33_05990 IPR006315 Outer membrane autotransporter barrel BED33_05990 IPR036709 Autotransporter beta-domain superfamily BED33_05990 IPR005546 Autotransporter beta-domain BED33_05995 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD BED33_05995 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED33_05995 IPR007848 Methyltransferase small domain BED33_05995 IPR002052 DNA methylase, N-6 adenine-specific, conserved site BED33_06000 IPR003346 Transposase, IS116/IS110/IS902 BED33_06000 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED33_06005 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal BED33_06005 IPR023753 FAD/NAD(P)-binding domain BED33_06005 IPR013785 Aldolase-type TIM barrel BED33_06005 IPR036188 FAD/NAD(P)-binding domain superfamily BED33_06010 IPR000620 EamA domain BED33_06015 IPR005325 Protein of unknown function DUF308, membrane BED33_06025 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED33_06025 IPR015424 Pyridoxal phosphate-dependent transferase BED33_06025 IPR002129 Pyridoxal phosphate-dependent decarboxylase BED33_06025 IPR010107 Glutamate decarboxylase BED33_06025 IPR021115 Pyridoxal-phosphate binding site BED33_06030 IPR002293 Amino acid/polyamine transporter I BED33_06035 IPR015868 Glutaminase BED33_06035 IPR012338 Beta-lactamase/transpeptidase-like BED33_06045 IPR001207 Transposase, mutator type BED33_06050 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site BED33_06050 IPR003352 Phosphotransferase system, EIIC BED33_06050 IPR013013 Phosphotransferase system, EIIC component, type 1 BED33_06050 IPR001996 Phosphotransferase system, IIB component, type 1 BED33_06050 IPR036878 Glucose permease domain IIB BED33_06055 IPR040190 N-acetylmuramic acid 6-phosphate etherase/glucokinase regulatory protein BED33_06055 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ BED33_06055 IPR000408 Regulator of chromosome condensation, RCC1 BED33_06055 IPR001347 Sugar isomerase (SIS) BED33_06055 IPR005486 Glucokinase regulatory protein, conserved site BED33_06060 IPR009057 Homeobox-like domain superfamily BED33_06060 IPR000281 Helix-turn-helix protein RpiR BED33_06060 IPR035472 RpiR-like, SIS domain BED33_06060 IPR001347 Sugar isomerase (SIS) BED33_06060 IPR022821 Transcription regulator HTH, MurR BED33_06060 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_06065 IPR017853 Glycoside hydrolase superfamily BED33_06065 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily BED33_06065 IPR001764 Glycoside hydrolase, family 3, N-terminal BED33_06065 IPR002772 Glycoside hydrolase family 3 C-terminal domain BED33_06065 IPR019800 Glycoside hydrolase, family 3, active site BED33_06065 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily BED33_06075 IPR008302 Uncharacterised conserved protein UCP016719 BED33_06085 IPR003346 Transposase, IS116/IS110/IS902 BED33_06085 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED33_06090 IPR042189 Sigma-70 factor, region 1.1 superfamily BED33_06090 IPR007624 RNA polymerase sigma-70 region 3 BED33_06090 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_06090 IPR007127 RNA polymerase sigma factor 70, region 1.1 BED33_06090 IPR013324 RNA polymerase sigma factor, region 3/4-like BED33_06090 IPR012760 RNA polymerase sigma factor RpoD, C-terminal BED33_06090 IPR007627 RNA polymerase sigma-70 region 2 BED33_06090 IPR013325 RNA polymerase sigma factor, region 2 BED33_06090 IPR000943 RNA polymerase sigma-70 BED33_06090 IPR014284 RNA polymerase sigma-70 like domain BED33_06090 IPR007630 RNA polymerase sigma-70 region 4 BED33_06090 IPR009042 RNA polymerase sigma-70 region 1.2 BED33_06090 IPR028630 RNA polymerase sigma factor RpoD BED33_06090 IPR007631 RNA polymerase sigma factor 70, non-essential domain BED33_06095 IPR034151 Bacterial DnaG primase, TOPRIM domain BED33_06095 IPR006295 DNA primase, DnaG BED33_06095 IPR013173 DNA primase DnaG, DnaB-binding domain BED33_06095 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily BED33_06095 IPR030846 DNA primase DnaG, bacteria BED33_06095 IPR019475 DNA primase, DnaB-helicase binding domain BED33_06095 IPR013264 DNA primase, catalytic core, N-terminal BED33_06095 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal BED33_06095 IPR036977 DNA Primase, CHC2-type zinc finger BED33_06095 IPR002694 Zinc finger, CHC2-type BED33_06095 IPR006171 TOPRIM domain BED33_06100 IPR001911 Ribosomal protein S21 BED33_06100 IPR018278 Ribosomal protein S21, conserved site BED33_06100 IPR038380 Ribosomal protein S21 superfamily BED33_06105 IPR017860 Peptidase M22, conserved site BED33_06105 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD BED33_06105 IPR017861 Kae1/TsaD family BED33_06105 IPR000905 Gcp-like domain BED33_06110 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY BED33_06115 IPR006156 Dihydroneopterin aldolase BED33_06115 IPR006157 Dihydroneopterin aldolase/epimerase domain BED33_06120 IPR003824 Undecaprenyl-diphosphatase UppP BED33_06125 IPR003607 HD/PDEase domain BED33_06125 IPR006674 HD domain BED33_06125 IPR012006 tRNA nucleotidyltransferase, proteobacteria BED33_06125 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain BED33_06125 IPR002646 Poly A polymerase, head domain BED33_06130 IPR016476 SH3 domain protein BED33_06130 IPR003646 SH3-like domain, bacterial-type BED33_06135 IPR039013 Inorganic triphosphatase YgiF BED33_06135 IPR007899 CHAD domain BED33_06135 IPR033469 CYTH-like domain superfamily BED33_06135 IPR023577 CYTH domain BED33_06140 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme BED33_06140 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain BED33_06140 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase BED33_06145 IPR011914 RfaE bifunctional protein, domain II BED33_06145 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site BED33_06145 IPR004821 Cytidyltransferase-like domain BED33_06145 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED33_06145 IPR029056 Ribokinase-like BED33_06145 IPR023030 Bifunctional protein HldE BED33_06145 IPR011611 Carbohydrate kinase PfkB BED33_06145 IPR011913 RfaE bifunctional protein, domain I BED33_06150 IPR002293 Amino acid/polyamine transporter I BED33_06155 IPR007475 Ubiquinone biosynthesis accessory factor UbiK BED33_06160 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily BED33_06160 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB BED33_06165 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type BED33_06165 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B BED33_06170 IPR016185 Pre-ATP-grasp domain superfamily BED33_06170 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain BED33_06175 IPR009576 Biofilm formation YgiB BED33_06185 IPR010130 Type I secretion outer membrane protein, TolC BED33_06185 IPR003423 Outer membrane efflux protein BED33_06190 IPR020084 NUDIX hydrolase, conserved site BED33_06190 IPR004385 Nucleoside diphosphate pyrophosphatase BED33_06190 IPR000086 NUDIX hydrolase domain BED33_06190 IPR015797 NUDIX hydrolase-like domain superfamily BED33_06195 IPR009659 Protein of unknown function DUF1249 BED33_06200 IPR029052 Metallo-dependent phosphatase-like BED33_06200 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA BED33_06200 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type BED33_06205 IPR029058 Alpha/Beta hydrolase fold BED33_06205 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA BED33_06210 IPR002288 DNA gyrase B subunit, C-terminal BED33_06210 IPR003594 Histidine kinase/HSP90-like ATPase BED33_06210 IPR006171 TOPRIM domain BED33_06210 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative BED33_06210 IPR018522 DNA topoisomerase, type IIA, conserved site BED33_06210 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 BED33_06210 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal BED33_06210 IPR013760 DNA topoisomerase, type IIA-like domain superfamily BED33_06210 IPR001241 DNA topoisomerase, type IIA BED33_06210 IPR020568 Ribosomal protein S5 domain 2-type fold BED33_06210 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BED33_06210 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BED33_06215 IPR005119 LysR, substrate-binding BED33_06215 IPR000847 Transcription regulator HTH, LysR BED33_06215 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_06215 IPR036390 Winged helix DNA-binding domain superfamily BED33_06220 IPR007138 Antibiotic biosynthesis monooxygenase domain BED33_06220 IPR011008 Dimeric alpha-beta barrel BED33_06225 IPR003680 Flavodoxin-like fold BED33_06225 IPR029039 Flavoprotein-like superfamily BED33_06230 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat BED33_06230 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal BED33_06230 IPR013760 DNA topoisomerase, type IIA-like domain superfamily BED33_06230 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal BED33_06230 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta BED33_06230 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily BED33_06230 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative BED33_06235 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase BED33_06235 IPR002123 Phospholipid/glycerol acyltransferase BED33_06240 IPR026589 Cell division protein FtsP BED33_06240 IPR011706 Multicopper oxidase, type 2 BED33_06240 IPR011707 Multicopper oxidase, type 3 BED33_06240 IPR008972 Cupredoxin BED33_06240 IPR006311 Twin-arginine translocation pathway, signal sequence BED33_06245 IPR022946 Uncharacterised protein family UPF0313 BED33_06245 IPR006638 Elp3/MiaB/NifB BED33_06245 IPR024560 Uncharacterised protein family UPF0313, C-terminal BED33_06245 IPR020612 Methylthiotransferase, conserved site BED33_06245 IPR007197 Radical SAM BED33_06245 IPR013704 Uncharacterised protein family UPF0313, N-terminal BED33_06245 IPR023404 Radical SAM, alpha/beta horseshoe BED33_06250 IPR036812 NADP-dependent oxidoreductase domain superfamily BED33_06250 IPR020471 Aldo/keto reductase BED33_06250 IPR023210 NADP-dependent oxidoreductase domain BED33_06250 IPR018170 Aldo/keto reductase, conserved site BED33_06255 IPR018211 Alcohol dehydrogenase, iron-type, conserved site BED33_06255 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA BED33_06260 IPR009057 Homeobox-like domain superfamily BED33_06260 IPR009594 Transcription regulator HTH, AraC, N-terminal BED33_06260 IPR018060 DNA binding HTH domain, AraC-type BED33_06265 IPR032816 SNARE associated Golgi protein BED33_06265 IPR032818 DedA family BED33_06270 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED33_06270 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED33_06270 IPR015424 Pyridoxal phosphate-dependent transferase BED33_06270 IPR006233 Cystathionine beta-lyase, bacterial BED33_06270 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme BED33_06275 IPR014164 TonB-system energizer ExbB type-1 BED33_06275 IPR002898 MotA/TolQ/ExbB proton channel BED33_06280 IPR014170 TonB system transport protein ExbD type-1 BED33_06280 IPR003400 Biopolymer transport protein ExbD/TolR BED33_06315 IPR022399 Helicase/secretion neighbourhood ATPase BED33_06315 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_06315 IPR001482 Type II/IV secretion system protein BED33_06330 IPR001775 GspD/PilQ family BED33_06330 IPR007055 BON domain BED33_06330 IPR004846 Type II/III secretion system BED33_06330 IPR014004 Transport-associated and nodulation domain, bacteria BED33_06330 IPR032789 Pilus formation protein, N-terminal BED33_06355 IPR004574 Alkylated DNA repair protein AlkB BED33_06355 IPR005123 Oxoglutarate/iron-dependent dioxygenase BED33_06355 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like BED33_06355 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily BED33_06360 IPR001036 Acriflavin resistance protein BED33_06360 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BED33_06360 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA BED33_06365 IPR012337 Ribonuclease H-like superfamily BED33_06370 IPR003738 SOS response associated peptidase (SRAP) BED33_06370 IPR036590 SOS response associated peptidase-like BED33_06385 IPR018062 HTH domain AraC-type, conserved site BED33_06385 IPR009057 Homeobox-like domain superfamily BED33_06385 IPR020449 Transcription regulator HTH, AraC- type BED33_06385 IPR018060 DNA binding HTH domain, AraC-type BED33_06390 IPR009057 Homeobox-like domain superfamily BED33_06390 IPR002514 Transposase IS3/IS911family BED33_06410 IPR017911 ABC transporter, macrolide export, ATP-binding domain BED33_06410 IPR025857 MacB-like periplasmic core domain BED33_06410 IPR003593 AAA+ ATPase domain BED33_06410 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_06410 IPR003838 ABC transporter permease protein domain BED33_06410 IPR003439 ABC transporter-like BED33_06410 IPR017871 ABC transporter, conserved site BED33_06415 IPR018060 DNA binding HTH domain, AraC-type BED33_06415 IPR018062 HTH domain AraC-type, conserved site BED33_06415 IPR020449 Transcription regulator HTH, AraC- type BED33_06415 IPR009057 Homeobox-like domain superfamily BED33_06425 IPR001584 Integrase, catalytic core BED33_06425 IPR012337 Ribonuclease H-like superfamily BED33_06425 IPR025948 HTH-like domain BED33_06425 IPR036397 Ribonuclease H superfamily BED33_06440 IPR021764 Enterochelin esterase, N-terminal BED33_06440 IPR000801 Putative esterase BED33_06440 IPR013783 Immunoglobulin-like fold BED33_06440 IPR029058 Alpha/Beta hydrolase fold BED33_06440 IPR014756 Immunoglobulin E-set BED33_06445 IPR003593 AAA+ ATPase domain BED33_06445 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_06445 IPR003439 ABC transporter-like BED33_06445 IPR017871 ABC transporter, conserved site BED33_06450 IPR000522 ABC transporter, permease protein, BtuC-like BED33_06450 IPR037294 ABC transporter, BtuC-like BED33_06455 IPR037294 ABC transporter, BtuC-like BED33_06455 IPR000522 ABC transporter, permease protein, BtuC-like BED33_06460 IPR002491 ABC transporter periplasmic binding domain BED33_06470 IPR036291 NAD(P)-binding domain superfamily BED33_06470 IPR001509 NAD-dependent epimerase/dehydratase BED33_06475 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily BED33_06475 IPR004090 Chemotaxis methyl-accepting receptor BED33_06475 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BED33_06475 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding BED33_06475 IPR003660 HAMP domain BED33_06475 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site BED33_06485 IPR042194 FHIPEP, domain 1 BED33_06485 IPR042193 FHIPEP, domain 3 BED33_06485 IPR042196 FHIPEP, domain 4 BED33_06485 IPR025505 FHIPEP conserved site BED33_06485 IPR001712 Type III secretion system FHIPEP BED33_06485 IPR006301 Flagellar biosynthesis protein FlhA BED33_06490 IPR029025 Type III secretion system substrate exporter, C-terminal BED33_06490 IPR006135 Type III secretion system substrate exporter BED33_06490 IPR006136 Flagellar biosynthetic protein FlhB BED33_06495 IPR006303 Flagellar biosynthesis protein FliR BED33_06495 IPR002010 Type III secretion system inner membrane R protein BED33_06500 IPR006305 Flagellar biosynthesis protein FliQ BED33_06500 IPR002191 Bacterial export protein family 3 BED33_06505 IPR005838 Type III secretion system inner membrane P protein BED33_06505 IPR005837 Flagellar transport protein FliP BED33_06510 IPR036429 SpoA-like superfamily BED33_06510 IPR001543 Surface presentation of antigen (SpoA) BED33_06510 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb BED33_06510 IPR012826 Flagellar motor switch FliN BED33_06520 IPR003593 AAA+ ATPase domain BED33_06520 IPR002197 DNA binding HTH domain, Fis-type BED33_06520 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BED33_06520 IPR002078 RNA polymerase sigma factor 54 interaction domain BED33_06520 IPR001789 Signal transduction response regulator, receiver domain BED33_06520 IPR009057 Homeobox-like domain superfamily BED33_06520 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BED33_06520 IPR011006 CheY-like superfamily BED33_06520 IPR025944 Sigma-54 interaction domain, conserved site BED33_06520 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_06525 IPR001624 Flagellar hook-basal body complex protein FliE BED33_06545 IPR003593 AAA+ ATPase domain BED33_06545 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site BED33_06545 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_06545 IPR005714 ATPase, type III secretion system, FliI/YscN BED33_06545 IPR040627 T3SS EscN ATPase, C-terminal BED33_06545 IPR020005 Flagellar export ATPase FliI, clade 1 BED33_06545 IPR032463 ATPase, type III secretion system, FliI BED33_06545 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain BED33_06570 IPR001444 Flagellar basal body rod protein, N-terminal BED33_06570 IPR006300 Flagellar basal-body rod protein FlgB BED33_06570 IPR019776 Flagellar basal body rod protein, conserved site BED33_06575 IPR001444 Flagellar basal body rod protein, N-terminal BED33_06575 IPR019776 Flagellar basal body rod protein, conserved site BED33_06575 IPR006299 Flagellar basal-body rod protein FlgC BED33_06575 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BED33_06580 IPR025963 FlgD Tudor-like domain BED33_06580 IPR025965 FlgD Ig-like domain BED33_06580 IPR005648 Flagellar hook capping protein BED33_06585 IPR019776 Flagellar basal body rod protein, conserved site BED33_06585 IPR011491 Flagellar hook protein FlgE BED33_06585 IPR001444 Flagellar basal body rod protein, N-terminal BED33_06585 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BED33_06585 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like BED33_06585 IPR037058 Flagellar hook protein FlgE superfamily BED33_06585 IPR020013 Flagellar hook-basal body protein, FlgE/F/G BED33_06590 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like BED33_06590 IPR020013 Flagellar hook-basal body protein, FlgE/F/G BED33_06590 IPR019776 Flagellar basal body rod protein, conserved site BED33_06590 IPR001444 Flagellar basal body rod protein, N-terminal BED33_06590 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BED33_06595 IPR001444 Flagellar basal body rod protein, N-terminal BED33_06595 IPR019776 Flagellar basal body rod protein, conserved site BED33_06595 IPR020013 Flagellar hook-basal body protein, FlgE/F/G BED33_06595 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like BED33_06595 IPR012834 Flagellar basal-body rod FlgG BED33_06595 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BED33_06600 IPR000527 Flagellar L-ring protein BED33_06605 IPR001782 Flagellar P-ring protein BED33_06640 IPR001029 Flagellin, D0/D1 domain BED33_06640 IPR042187 Flagellin, C-terminal domain, subdomain 2 BED33_06640 IPR001492 Flagellin BED33_06650 IPR003713 Flagellar protein FliS BED33_06650 IPR036584 Flagellar protein FliS superfamily BED33_06670 IPR014284 RNA polymerase sigma-70 like domain BED33_06670 IPR012845 RNA polymerase sigma factor, FliA/WhiG BED33_06670 IPR000943 RNA polymerase sigma-70 BED33_06670 IPR007630 RNA polymerase sigma-70 region 4 BED33_06670 IPR007627 RNA polymerase sigma-70 region 2 BED33_06670 IPR013325 RNA polymerase sigma factor, region 2 BED33_06670 IPR013324 RNA polymerase sigma factor, region 3/4-like BED33_06675 IPR000540 Flagellar motor protein MotA, conserved site BED33_06675 IPR022522 Flagellar motor stator, MotA BED33_06675 IPR002898 MotA/TolQ/ExbB proton channel BED33_06680 IPR036737 OmpA-like domain superfamily BED33_06680 IPR006665 OmpA-like domain BED33_06680 IPR025713 Motility protein B, N-terminal domain BED33_06685 IPR008816 Glycine zipper 2TM domain BED33_06690 IPR001821 [NiFe]-hydrogenase, small subunit BED33_06690 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily BED33_06690 IPR037148 [NiFe]-hydrogenase, small subunit, C-terminal domain superfamily BED33_06690 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal BED33_06690 IPR006311 Twin-arginine translocation pathway, signal sequence BED33_06690 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit BED33_06690 IPR027394 Cytochrome-c3 hydrogenase, C-terminal BED33_06695 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal BED33_06695 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BED33_06695 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BED33_06700 IPR005614 NrfD family BED33_06705 IPR001501 Nickel-dependent hydrogenase, large subunit BED33_06705 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site BED33_06705 IPR029014 [NiFe]-hydrogenase, large subunit BED33_06710 IPR023430 Peptidase HybD-like domain superfamily BED33_06710 IPR000671 Peptidase A31 family BED33_06710 IPR004419 Peptidase A31, hydrogenase expression/formation protein BED33_06715 IPR038530 [NiFe]-hydrogenase assembly, chaperone, HybE superfamily BED33_06715 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE BED33_06720 IPR039002 Hydrogenase maturation factor HybF BED33_06720 IPR000688 Hydrogenase maturation factor HypA/HybF BED33_06720 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site BED33_06725 IPR004392 Hydrogenase maturation factor HypB BED33_06725 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_06725 IPR003495 CobW/HypB/UreG, nucleotide-binding domain BED33_06730 IPR019812 Hydrogenase assembly chaperone, conserved site BED33_06730 IPR001109 Hydrogenase expression/formation protein, HupF/HypC BED33_06730 IPR037254 HupF/HypC superfamily BED33_06735 IPR042243 HypD, domain 2 BED33_06735 IPR002780 Hydrogenase formation HypD protein BED33_06735 IPR042244 HypD, domain 1 BED33_06740 IPR036676 PurM-like, C-terminal domain superfamily BED33_06740 IPR011854 Carbamoyl dehydratase HypE BED33_06740 IPR036921 PurM-like, N-terminal domain superfamily BED33_06740 IPR016188 PurM-like, N-terminal domain BED33_06740 IPR010918 PurM-like, C-terminal domain BED33_06745 IPR041440 HypF, Kae1-like domain BED33_06745 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily BED33_06745 IPR017968 Acylphosphatase, conserved site BED33_06745 IPR001792 Acylphosphatase-like domain BED33_06745 IPR004421 Carbamoyltransferase, HypF-type BED33_06745 IPR036046 Acylphosphatase-like domain superfamily BED33_06745 IPR011125 Zinc finger, HypF-type BED33_06745 IPR006070 YrdC-like domain BED33_06750 IPR026287 Protein adenylyltransferase SoFic-like BED33_06750 IPR040198 Fido domain-containing protein BED33_06750 IPR036597 Fido-like domain superfamily BED33_06750 IPR003812 Fido domain BED33_06750 IPR025758 Fic/DOC N-terminal BED33_06755 IPR029056 Ribokinase-like BED33_06755 IPR000417 Hydroxyethylthiazole kinase BED33_06770 IPR035919 EAL domain superfamily BED33_06770 IPR013655 PAS fold-3 BED33_06770 IPR001633 EAL domain BED33_06770 IPR000160 GGDEF domain BED33_06770 IPR029787 Nucleotide cyclase BED33_06770 IPR001610 PAC motif BED33_06770 IPR000014 PAS domain BED33_06770 IPR000700 PAS-associated, C-terminal BED33_06770 IPR035965 PAS domain superfamily BED33_06770 IPR013656 PAS fold-4 BED33_06775 IPR022824 Multidrug resistance protein MdtA BED33_06775 IPR006143 RND efflux pump, membrane fusion protein BED33_06775 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BED33_06790 IPR005829 Sugar transporter, conserved site BED33_06790 IPR005828 Major facilitator, sugar transporter-like BED33_06790 IPR036292 Proline/betaine transporter ProP, C-terminal BED33_06790 IPR015041 Osmosensory transporter coiled coil BED33_06790 IPR004736 MFS transporter, metabolite:H symporter BED33_06790 IPR036259 MFS transporter superfamily BED33_06790 IPR020846 Major facilitator superfamily domain BED33_06805 IPR003841 Sodium-dependent phosphate transport protein BED33_06805 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein BED33_06810 IPR036452 Ribonucleoside hydrolase-like BED33_06810 IPR022976 Non-specific ribonucleoside hydrolase RihC BED33_06810 IPR023186 Inosine/uridine-preferring nucleoside hydrolase BED33_06810 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain BED33_06815 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BED33_06815 IPR028082 Periplasmic binding protein-like I BED33_06815 IPR000843 LacI-type HTH domain BED33_06820 IPR003346 Transposase, IS116/IS110/IS902 BED33_06820 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED33_06825 IPR011701 Major facilitator superfamily BED33_06825 IPR004736 MFS transporter, metabolite:H symporter BED33_06825 IPR020846 Major facilitator superfamily domain BED33_06825 IPR036259 MFS transporter superfamily BED33_06825 IPR005828 Major facilitator, sugar transporter-like BED33_06830 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_06830 IPR036390 Winged helix DNA-binding domain superfamily BED33_06830 IPR004839 Aminotransferase, class I/classII BED33_06830 IPR015424 Pyridoxal phosphate-dependent transferase BED33_06830 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED33_06830 IPR000524 Transcription regulator HTH, GntR BED33_06850 IPR002491 ABC transporter periplasmic binding domain BED33_06850 IPR033870 FatB domain BED33_06855 IPR037294 ABC transporter, BtuC-like BED33_06855 IPR000522 ABC transporter, permease protein, BtuC-like BED33_06860 IPR000522 ABC transporter, permease protein, BtuC-like BED33_06860 IPR037294 ABC transporter, BtuC-like BED33_06870 IPR000994 Peptidase M24 BED33_06870 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 BED33_06870 IPR036005 Creatinase/aminopeptidase-like BED33_06870 IPR001714 Peptidase M24, methionine aminopeptidase BED33_06890 IPR005694 Efflux pump membrane protein BED33_06890 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BED33_06890 IPR030196 Multidrug resistance protein MdtN BED33_06895 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein BED33_06905 IPR027464 Ornithine decarboxylase, N-terminal BED33_06905 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal BED33_06905 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily BED33_06905 IPR000310 Orn/Lys/Arg decarboxylase, major domain BED33_06905 IPR011193 Ornithine/lysine/arginine decarboxylase BED33_06905 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal BED33_06905 IPR027568 Ornithine decarboxylase SpeF BED33_06905 IPR015424 Pyridoxal phosphate-dependent transferase BED33_06905 IPR011006 CheY-like superfamily BED33_06905 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED33_06905 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED33_06910 IPR027566 Putrescine transporter PotE BED33_06910 IPR004754 Amino acid antiporter BED33_06910 IPR002293 Amino acid/polyamine transporter I BED33_06930 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain BED33_06930 IPR003220 InsA N-terminal domain BED33_06950 IPR002104 Integrase, catalytic domain BED33_06950 IPR013762 Integrase-like, catalytic domain superfamily BED33_06950 IPR011010 DNA breaking-rejoining enzyme, catalytic core BED33_06950 IPR010998 Integrase/recombinase, N-terminal BED33_06965 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily BED33_06965 IPR011006 CheY-like superfamily BED33_06965 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal BED33_06965 IPR011193 Ornithine/lysine/arginine decarboxylase BED33_06965 IPR000310 Orn/Lys/Arg decarboxylase, major domain BED33_06965 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal BED33_06965 IPR015424 Pyridoxal phosphate-dependent transferase BED33_06965 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED33_06965 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED33_06965 IPR027464 Ornithine decarboxylase, N-terminal BED33_06975 IPR023664 Murein transglycosylase-C BED33_06975 IPR000189 Prokaryotic transglycosylase, active site BED33_06975 IPR008258 Transglycosylase SLT domain 1 BED33_06975 IPR023346 Lysozyme-like domain superfamily BED33_06975 IPR024570 Murein transglycosylase-C, N-terminal BED33_06980 IPR036766 Fe(II) trafficking protein YggX superfamily BED33_06980 IPR007457 Fe(II) trafficking protein YggX BED33_06985 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal BED33_06985 IPR000445 Helix-hairpin-helix motif BED33_06985 IPR004035 Endonuclease III, iron-sulphur binding site BED33_06985 IPR005760 A/G-specific adenine glycosylase MutY BED33_06985 IPR004036 Endonuclease III-like, conserved site-2 BED33_06985 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif BED33_06985 IPR003265 HhH-GPD domain BED33_06985 IPR011257 DNA glycosylase BED33_06985 IPR015797 NUDIX hydrolase-like domain superfamily BED33_06985 IPR029119 MutY, C-terminal BED33_06990 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type BED33_06990 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED33_06995 IPR007416 Protein of unknown function DUF469 BED33_07000 IPR012338 Beta-lactamase/transpeptidase-like BED33_07000 IPR015868 Glutaminase BED33_07005 IPR021307 Protein of unknown function DUF2884 BED33_07010 IPR034505 Anaerobic coproporphyrinogen-III oxidase BED33_07010 IPR004559 Heme chaperone HemW-like BED33_07010 IPR010723 HemN, C-terminal BED33_07010 IPR006638 Elp3/MiaB/NifB BED33_07010 IPR007197 Radical SAM BED33_07010 IPR023404 Radical SAM, alpha/beta horseshoe BED33_07015 IPR029001 Inosine triphosphate pyrophosphatase-like BED33_07015 IPR002637 Ham1-like protein BED33_07015 IPR020922 dITP/XTP pyrophosphatase BED33_07020 IPR036591 YggU-like superfamily BED33_07020 IPR003746 Protein of unknown function DUF167 BED33_07020 IPR005228 Conserved hypothetical protein CHP00251 BED33_07025 IPR003425 CCB3/YggT BED33_07030 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal BED33_07030 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain BED33_07030 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BED33_07030 IPR036291 NAD(P)-binding domain superfamily BED33_07030 IPR000304 Pyrroline-5-carboxylate reductase BED33_07035 IPR011078 Pyridoxal phosphate homeostasis protein BED33_07035 IPR001608 Alanine racemase, N-terminal BED33_07035 IPR029066 PLP-binding barrel BED33_07040 IPR003593 AAA+ ATPase domain BED33_07040 IPR006321 Pilus retraction protein PilT BED33_07040 IPR001482 Type II/IV secretion system protein BED33_07040 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_07045 IPR017754 Agmatine deiminase BED33_07045 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type BED33_07050 IPR003010 Carbon-nitrogen hydrolase BED33_07050 IPR023719 Aliphatic amidase BED33_07050 IPR036526 Carbon-nitrogen hydrolase superfamily BED33_07055 IPR037027 YqgF/RNase H-like domain superfamily BED33_07055 IPR006641 YqgF/RNase H-like domain BED33_07055 IPR005227 Putative pre-16S rRNA nuclease BED33_07055 IPR012337 Ribonuclease H-like superfamily BED33_07060 IPR003774 Protein of unknown function UPF0301 BED33_07065 IPR004215 Prokaryotic glutathione synthetase, N-terminal BED33_07065 IPR016185 Pre-ATP-grasp domain superfamily BED33_07065 IPR011761 ATP-grasp fold BED33_07065 IPR013815 ATP-grasp fold, subdomain 1 BED33_07065 IPR006284 Glutathione synthetase, prokaryotic BED33_07065 IPR004218 Prokaryotic glutathione synthetase, ATP-binding BED33_07070 IPR006700 Ribosomal RNA small subunit methyltransferase E BED33_07070 IPR029028 Alpha/beta knot methyltransferases BED33_07070 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BED33_07070 IPR015947 PUA-like superfamily BED33_07075 IPR007346 Endonuclease I BED33_07080 IPR035240 SprT-like, zinc ribbon domain BED33_07080 IPR023483 Uncharacterised protein family SprT BED33_07080 IPR006640 SprT-like BED33_07085 IPR001845 HTH ArsR-type DNA-binding domain BED33_07085 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_07085 IPR036390 Winged helix DNA-binding domain superfamily BED33_07085 IPR011991 ArsR-like helix-turn-helix domain BED33_07090 IPR001207 Transposase, mutator type BED33_07095 IPR007272 Sulphur transport domain BED33_07105 IPR022629 S-adenosylmethionine synthetase, central domain BED33_07105 IPR022628 S-adenosylmethionine synthetase, N-terminal BED33_07105 IPR022631 S-adenosylmethionine synthetase, conserved site BED33_07105 IPR022636 S-adenosylmethionine synthetase superfamily BED33_07105 IPR002133 S-adenosylmethionine synthetase BED33_07105 IPR022630 S-adenosylmethionine synthetase, C-terminal BED33_07110 IPR041128 Arginine decarboxylase, C-terminal helical BED33_07110 IPR040634 Arginine decarboxylase, helical bundle domain BED33_07110 IPR002985 Arginine decarboxylase BED33_07110 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal BED33_07110 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal BED33_07110 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site BED33_07110 IPR000183 Ornithine/DAP/Arg decarboxylase BED33_07110 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site BED33_07110 IPR029066 PLP-binding barrel BED33_07115 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily BED33_07115 IPR017941 Rieske [2Fe-2S] iron-sulphur domain BED33_07120 IPR001915 Peptidase M48 BED33_07125 IPR005475 Transketolase-like, pyrimidine-binding domain BED33_07125 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II BED33_07125 IPR020826 Transketolase binding site BED33_07125 IPR029061 Thiamin diphosphate-binding fold BED33_07125 IPR033247 Transketolase family BED33_07125 IPR005474 Transketolase, N-terminal BED33_07125 IPR005478 Transketolase, bacterial-like BED33_07125 IPR033248 Transketolase, C-terminal domain BED33_07130 IPR036291 NAD(P)-binding domain superfamily BED33_07130 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain BED33_07130 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family BED33_07130 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site BED33_07130 IPR006422 D-erythrose-4-phosphate dehydrogenase BED33_07130 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain BED33_07135 IPR001576 Phosphoglycerate kinase BED33_07135 IPR015911 Phosphoglycerate kinase, conserved site BED33_07135 IPR015824 Phosphoglycerate kinase, N-terminal BED33_07135 IPR036043 Phosphoglycerate kinase superfamily BED33_07140 IPR000771 Fructose-bisphosphate aldolase, class-II BED33_07140 IPR013785 Aldolase-type TIM barrel BED33_07140 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype BED33_07145 IPR015103 Protein-tyrosine phosphatase, YopH, N-terminal BED33_07145 IPR016130 Protein-tyrosine phosphatase, active site BED33_07145 IPR003595 Protein-tyrosine phosphatase, catalytic BED33_07145 IPR003546 Type III secreted modular tyrosine phosphatase, SptP/YopH BED33_07145 IPR036484 Protein-tyrosine phosphatase, YopH, N-terminal domain superfamily BED33_07145 IPR000387 Tyrosine specific protein phosphatases domain BED33_07145 IPR000242 PTP type protein phosphatase BED33_07145 IPR029021 Protein-tyrosine phosphatase-like BED33_07150 IPR006686 Mechanosensitive ion channel MscS, conserved site BED33_07150 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 BED33_07150 IPR023408 Mechanosensitive ion channel MscS domain superfamily BED33_07150 IPR008910 Conserved TM helix BED33_07150 IPR010920 LSM domain superfamily BED33_07150 IPR006685 Mechanosensitive ion channel MscS BED33_07150 IPR011066 Mechanosensitive ion channel MscS, C-terminal BED33_07155 IPR003346 Transposase, IS116/IS110/IS902 BED33_07155 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED33_07160 IPR023445 Arginine exporter protein ArgO, enterobacteria BED33_07160 IPR004777 L-lysine exporter/arginine exporter BED33_07160 IPR001123 Amino acid exporter protein, LeuE-type BED33_07165 IPR007497 Protein of unknown function DUF541 BED33_07170 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_07170 IPR000847 Transcription regulator HTH, LysR BED33_07170 IPR017685 HTH-type transcriptional regulator ArgP BED33_07170 IPR036390 Winged helix DNA-binding domain superfamily BED33_07170 IPR005119 LysR, substrate-binding BED33_07170 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria BED33_07175 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup BED33_07175 IPR037171 NagB/RpiA transferase-like BED33_07175 IPR004788 Ribose 5-phosphate isomerase, type A BED33_07180 IPR036291 NAD(P)-binding domain superfamily BED33_07180 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain BED33_07180 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 BED33_07180 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site BED33_07180 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BED33_07180 IPR002912 ACT domain BED33_07215 IPR024924 7-carboxy-7-deazaguanine synthase-like BED33_07215 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria BED33_07215 IPR007197 Radical SAM BED33_07215 IPR013785 Aldolase-type TIM barrel BED33_07235 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family BED33_07235 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily BED33_07240 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily BED33_07240 IPR001433 Oxidoreductase FAD/NAD(P)-binding BED33_07240 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria BED33_07240 IPR017938 Riboflavin synthase-like beta-barrel BED33_07240 IPR017927 FAD-binding domain, ferredoxin reductase-type BED33_07240 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BED33_07240 IPR001094 Flavodoxin-like BED33_07240 IPR008254 Flavodoxin/nitric oxide synthase BED33_07240 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain BED33_07240 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase BED33_07240 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding BED33_07240 IPR029039 Flavoprotein-like superfamily BED33_07245 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain BED33_07245 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site BED33_07245 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily BED33_07245 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain BED33_07245 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit BED33_07250 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED33_07250 IPR011800 Phosphoadenosine phosphosulphate reductase CysH BED33_07250 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase BED33_07250 IPR002500 Phosphoadenosine phosphosulphate reductase BED33_07265 IPR007484 Peptidase M28 BED33_07270 IPR035996 Tetrapyrrole methylase superfamily BED33_07270 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site BED33_07270 IPR006367 Sirohaem synthase, N-terminal BED33_07270 IPR019478 Sirohaem synthase, dimerisation domain BED33_07270 IPR028281 Siroheme synthase, central domain BED33_07270 IPR012409 Sirohaem synthase BED33_07270 IPR037115 Sirohaem synthase, dimerisation domain superfamily BED33_07270 IPR036291 NAD(P)-binding domain superfamily BED33_07270 IPR014776 Tetrapyrrole methylase, subdomain 2 BED33_07270 IPR000878 Tetrapyrrole methylase BED33_07270 IPR006366 Uroporphyrin-III C-methyltransferase BED33_07270 IPR014777 Tetrapyrrole methylase, subdomain 1 BED33_07275 IPR002500 Phosphoadenosine phosphosulphate reductase BED33_07275 IPR011784 Sulphate adenylyltransferase, small subunit BED33_07275 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED33_07280 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal BED33_07280 IPR009000 Translation protein, beta-barrel domain superfamily BED33_07280 IPR000795 Transcription factor, GTP-binding domain BED33_07280 IPR011779 Sulphate adenylyltransferase, large subunit BED33_07280 IPR005225 Small GTP-binding protein domain BED33_07280 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain BED33_07280 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_07280 IPR031157 Tr-type G domain, conserved site BED33_07285 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_07285 IPR002891 Adenylyl-sulfate kinase BED33_07290 IPR022721 Protein of unknown function DUF3561 BED33_07295 IPR023081 Cell division protein FtsB BED33_07295 IPR007060 Septum formation initiator FtsL/DivIC BED33_07300 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BED33_07300 IPR034683 Cytidylyltransferase IspD/TarI BED33_07300 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site BED33_07300 IPR029044 Nucleotide-diphospho-sugar transferases BED33_07305 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site BED33_07305 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily BED33_07305 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase BED33_07310 IPR042214 Pseudouridine synthase, TruD, catalytic domain BED33_07310 IPR020103 Pseudouridine synthase, catalytic domain superfamily BED33_07310 IPR011760 Pseudouridine synthase, TruD, insertion domain BED33_07310 IPR020119 Pseudouridine synthase TruD, conserved site BED33_07310 IPR001656 Pseudouridine synthase, TruD BED33_07315 IPR036523 SurE-like phosphatase/nucleotidase superfamily BED33_07315 IPR030048 Survival protein SurE BED33_07315 IPR002828 Survival protein SurE-like phosphatase/nucleotidase BED33_07320 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED33_07320 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase BED33_07325 IPR018392 LysM domain BED33_07325 IPR016047 Peptidase M23 BED33_07325 IPR011055 Duplicated hybrid motif BED33_07325 IPR036779 LysM domain superfamily BED33_07330 IPR009042 RNA polymerase sigma-70 region 1.2 BED33_07330 IPR007627 RNA polymerase sigma-70 region 2 BED33_07330 IPR007624 RNA polymerase sigma-70 region 3 BED33_07330 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_07330 IPR007630 RNA polymerase sigma-70 region 4 BED33_07330 IPR014284 RNA polymerase sigma-70 like domain BED33_07330 IPR012761 RNA polymerase sigma factor RpoS BED33_07330 IPR013324 RNA polymerase sigma factor, region 3/4-like BED33_07330 IPR013325 RNA polymerase sigma factor, region 2 BED33_07330 IPR000943 RNA polymerase sigma-70 BED33_07335 IPR005748 DNA mismatch repair protein MutS BED33_07335 IPR016151 DNA mismatch repair protein MutS, N-terminal BED33_07335 IPR036187 DNA mismatch repair protein MutS, core domain superfamily BED33_07335 IPR007860 DNA mismatch repair protein MutS, connector domain BED33_07335 IPR036678 MutS, connector domain superfamily BED33_07335 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_07335 IPR007696 DNA mismatch repair protein MutS, core BED33_07335 IPR007861 DNA mismatch repair protein MutS, clamp BED33_07335 IPR000432 DNA mismatch repair protein MutS, C-terminal BED33_07335 IPR007695 DNA mismatch repair protein MutS-like, N-terminal BED33_07335 IPR017261 DNA mismatch repair protein MutS/MSH BED33_07350 IPR008966 Adhesion domain superfamily BED33_07350 IPR036937 Fimbrial-type adhesion domain superfamily BED33_07350 IPR000259 Fimbrial-type adhesion domain BED33_07355 IPR008966 Adhesion domain superfamily BED33_07355 IPR036937 Fimbrial-type adhesion domain superfamily BED33_07355 IPR000259 Fimbrial-type adhesion domain BED33_07360 IPR042186 Outer membrane usher protein FimD, plug domain BED33_07360 IPR018030 Fimbrial membrane usher, conserved site BED33_07360 IPR037224 PapC, N-terminal domain superfamily BED33_07360 IPR000015 Outer membrane usher protein BED33_07360 IPR025885 PapC, N-terminal domain BED33_07360 IPR025949 PapC-like, C-terminal domain BED33_07365 IPR008962 PapD-like superfamily BED33_07365 IPR013783 Immunoglobulin-like fold BED33_07365 IPR036316 Pili assembly chaperone, C-terminal domain superfamily BED33_07365 IPR001829 Pili assembly chaperone, bacterial BED33_07365 IPR016147 Pili assembly chaperone, N-terminal BED33_07365 IPR016148 Pili assembly chaperone, C-terminal BED33_07365 IPR018046 Pili assembly chaperone, conserved site BED33_07375 IPR008966 Adhesion domain superfamily BED33_07375 IPR036937 Fimbrial-type adhesion domain superfamily BED33_07375 IPR000259 Fimbrial-type adhesion domain BED33_07380 IPR036937 Fimbrial-type adhesion domain superfamily BED33_07380 IPR008966 Adhesion domain superfamily BED33_07380 IPR000259 Fimbrial-type adhesion domain BED33_07405 IPR003593 AAA+ ATPase domain BED33_07405 IPR039421 Type I protein exporter BED33_07405 IPR011527 ABC transporter type 1, transmembrane domain BED33_07405 IPR036640 ABC transporter type 1, transmembrane domain superfamily BED33_07405 IPR003439 ABC transporter-like BED33_07405 IPR017871 ABC transporter, conserved site BED33_07405 IPR033838 Colicin V processing peptidase BED33_07405 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_07405 IPR005074 Peptidase C39, bacteriocin processing BED33_07410 IPR030190 Macrolide export protein MacA BED33_07410 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BED33_07410 IPR006143 RND efflux pump, membrane fusion protein BED33_07415 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_07415 IPR003593 AAA+ ATPase domain BED33_07415 IPR003838 ABC transporter permease protein domain BED33_07415 IPR017871 ABC transporter, conserved site BED33_07415 IPR017911 ABC transporter, macrolide export, ATP-binding domain BED33_07415 IPR003439 ABC transporter-like BED33_07415 IPR025857 MacB-like periplasmic core domain BED33_07420 IPR003423 Outer membrane efflux protein BED33_07420 IPR010131 RND efflux system, outer membrane lipoprotein, NodT BED33_07425 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 BED33_07425 IPR000794 Beta-ketoacyl synthase BED33_07425 IPR018201 Beta-ketoacyl synthase, active site BED33_07425 IPR014031 Beta-ketoacyl synthase, C-terminal BED33_07425 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BED33_07425 IPR016039 Thiolase-like BED33_07425 IPR014030 Beta-ketoacyl synthase, N-terminal BED33_07440 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase BED33_07440 IPR036291 NAD(P)-binding domain superfamily BED33_07440 IPR002347 Short-chain dehydrogenase/reductase SDR BED33_07440 IPR020904 Short-chain dehydrogenase/reductase, conserved site BED33_07445 IPR015424 Pyridoxal phosphate-dependent transferase BED33_07445 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED33_07445 IPR004839 Aminotransferase, class I/classII BED33_07445 IPR005861 Histidinol-phosphate aminotransferase family BED33_07445 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED33_07450 IPR004852 Di-haem cytochrome c peroxidase BED33_07450 IPR009056 Cytochrome c-like domain BED33_07450 IPR036909 Cytochrome c-like domain superfamily BED33_07450 IPR025992 Haem-binding domain BED33_07460 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BED33_07460 IPR035649 EFG, domain V BED33_07460 IPR000640 Elongation factor EFG, domain V-like BED33_07460 IPR041095 Elongation Factor G, domain II BED33_07460 IPR004161 Translation elongation factor EFTu-like, domain 2 BED33_07460 IPR031157 Tr-type G domain, conserved site BED33_07460 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_07460 IPR020568 Ribosomal protein S5 domain 2-type fold BED33_07460 IPR009022 Elongation factor G, domain III BED33_07460 IPR035647 EF-G domain III/V-like BED33_07460 IPR000795 Transcription factor, GTP-binding domain BED33_07460 IPR009000 Translation protein, beta-barrel domain superfamily BED33_07460 IPR005517 Translation elongation factor EFG/EF2, domain IV BED33_07460 IPR004540 Translation elongation factor EFG/EF2 BED33_07460 IPR005225 Small GTP-binding protein domain BED33_07465 IPR001845 HTH ArsR-type DNA-binding domain BED33_07465 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_07465 IPR036390 Winged helix DNA-binding domain superfamily BED33_07465 IPR011991 ArsR-like helix-turn-helix domain BED33_07470 IPR036291 NAD(P)-binding domain superfamily BED33_07470 IPR011032 GroES-like superfamily BED33_07470 IPR013154 Alcohol dehydrogenase, N-terminal BED33_07470 IPR013149 Alcohol dehydrogenase, C-terminal BED33_07475 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component BED33_07480 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit BED33_07490 IPR004701 Phosphotransferase system, mannose-type IIA component BED33_07490 IPR033887 PTS system mannose/sorbose specific IIA subunit BED33_07490 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily BED33_07490 IPR013789 Phosphotransferase system, mannose family IIA component BED33_07495 IPR011991 ArsR-like helix-turn-helix domain BED33_07495 IPR037171 NagB/RpiA transferase-like BED33_07495 IPR009057 Homeobox-like domain superfamily BED33_07495 IPR025246 Transposase IS30-like HTH domain BED33_07495 IPR007324 Sugar-binding domain, putative BED33_07500 IPR003010 Carbon-nitrogen hydrolase BED33_07500 IPR036526 Carbon-nitrogen hydrolase superfamily BED33_07520 IPR003593 AAA+ ATPase domain BED33_07520 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_07520 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein BED33_07520 IPR017871 ABC transporter, conserved site BED33_07520 IPR003439 ABC transporter-like BED33_07525 IPR003593 AAA+ ATPase domain BED33_07525 IPR003439 ABC transporter-like BED33_07525 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_07525 IPR017871 ABC transporter, conserved site BED33_07525 IPR030921 LPS export ABC transporter, ATP-binding protein LptB BED33_07530 IPR001851 ABC transporter, permease BED33_07530 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal BED33_07535 IPR001851 ABC transporter, permease BED33_07540 IPR028081 Leucine-binding protein domain BED33_07540 IPR000709 Leu/Ile/Val-binding protein BED33_07540 IPR028082 Periplasmic binding protein-like I BED33_07545 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily BED33_07545 IPR011167 Iron-dependent fumarate hydratase BED33_07545 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain BED33_07545 IPR020557 Fumarate lyase, conserved site BED33_07545 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain BED33_07550 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site BED33_07550 IPR009010 Aspartate decarboxylase-like domain superfamily BED33_07550 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal BED33_07550 IPR006657 Molybdopterin dinucleotide-binding domain BED33_07550 IPR006656 Molybdopterin oxidoreductase BED33_07550 IPR006311 Twin-arginine translocation pathway, signal sequence BED33_07550 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain BED33_07550 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site BED33_07550 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE BED33_07555 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BED33_07555 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BED33_07555 IPR014297 Dimethylsulphoxide reductase, chain B BED33_07560 IPR007059 DMSO reductase anchor subunit (DmsC) BED33_07565 IPR026269 Tat proofreading chaperone DmsD-type BED33_07565 IPR036411 TorD-like superfamily BED33_07565 IPR020945 DMSO/Nitrate reductase chaperone BED33_07565 IPR028611 Tat proofreading chaperone DmsD BED33_07570 IPR003346 Transposase, IS116/IS110/IS902 BED33_07570 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED33_07575 IPR023745 MSF-type transporter, YcaD BED33_07575 IPR036259 MFS transporter superfamily BED33_07575 IPR020846 Major facilitator superfamily domain BED33_07575 IPR011701 Major facilitator superfamily BED33_07580 IPR036653 CinA-like, C-terminal BED33_07580 IPR008136 CinA, C-terminal BED33_07585 IPR020584 DNA recombination/repair protein RecA, conserved site BED33_07585 IPR003593 AAA+ ATPase domain BED33_07585 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface BED33_07585 IPR013765 DNA recombination and repair protein RecA BED33_07585 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain BED33_07585 IPR023400 DNA recombination and repair protein RecA, C-terminal BED33_07585 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_07590 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_07590 IPR003783 Regulatory protein RecX BED33_07595 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily BED33_07595 IPR003156 DHHA1 domain BED33_07595 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria BED33_07595 IPR012947 Threonyl/alanyl tRNA synthetase, SAD BED33_07595 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain BED33_07595 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily BED33_07595 IPR002318 Alanine-tRNA ligase, class IIc BED33_07595 IPR009000 Translation protein, beta-barrel domain superfamily BED33_07595 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal BED33_07600 IPR036107 Carbon storage regulator superfamily BED33_07600 IPR003751 Translational regulator CsrA BED33_07620 IPR006439 HAD hydrolase, subfamily IA BED33_07620 IPR010976 Beta-phosphoglucomutase hydrolase BED33_07620 IPR023214 HAD superfamily BED33_07620 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BED33_07620 IPR041492 Haloacid dehalogenase-like hydrolase BED33_07620 IPR036412 HAD-like superfamily BED33_07630 IPR006334 Glutamate--cysteine ligase, monofunctional BED33_07630 IPR007370 Glutamate--cysteine ligase BED33_07630 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain BED33_07635 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily BED33_07635 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like BED33_07635 IPR003815 S-ribosylhomocysteinase (LuxS) BED33_07640 IPR002550 CNNM, transmembrane domain BED33_07640 IPR036318 FAD-binding, type PCMH-like superfamily BED33_07640 IPR016169 FAD-binding, type PCMH, subdomain 2 BED33_07640 IPR005170 Transporter-associated domain BED33_07640 IPR000644 CBS domain BED33_07645 IPR003346 Transposase, IS116/IS110/IS902 BED33_07645 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED33_07655 IPR002541 Cytochrome c assembly protein BED33_07660 IPR004780 Signal recognition particle protein BED33_07660 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily BED33_07660 IPR004125 Signal recognition particle, SRP54 subunit, M-domain BED33_07660 IPR003593 AAA+ ATPase domain BED33_07660 IPR013822 Signal recognition particle SRP54, helical bundle BED33_07660 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain BED33_07660 IPR022941 Signal recognition particle, SRP54 subunit BED33_07660 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_07660 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily BED33_07665 IPR023803 Ribosomal protein S16 domain superfamily BED33_07665 IPR000307 Ribosomal protein S16 BED33_07665 IPR020592 Ribosomal protein S16, conserved site BED33_07670 IPR011033 PRC-barrel-like superfamily BED33_07670 IPR009000 Translation protein, beta-barrel domain superfamily BED33_07670 IPR036976 RimM, N-terminal domain superfamily BED33_07670 IPR027275 PRC-barrel domain BED33_07670 IPR011961 16S rRNA processing protein RimM BED33_07670 IPR002676 RimM, N-terminal BED33_07675 IPR029028 Alpha/beta knot methyltransferases BED33_07675 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain BED33_07675 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal BED33_07675 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria BED33_07675 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BED33_07680 IPR038657 Ribosomal protein L19 superfamily BED33_07680 IPR001857 Ribosomal protein L19 BED33_07680 IPR018257 Ribosomal protein L19, conserved site BED33_07680 IPR008991 Translation protein SH3-like domain superfamily BED33_07690 IPR004668 Anaerobic c4-dicarboxylate membrane transporter BED33_07695 IPR001789 Signal transduction response regulator, receiver domain BED33_07695 IPR007492 LytTR DNA-binding domain BED33_07695 IPR011006 CheY-like superfamily BED33_07700 IPR006219 DHAP synthase, class 1 BED33_07700 IPR006218 DAHP synthetase I/KDSA BED33_07700 IPR013785 Aldolase-type TIM barrel BED33_07705 IPR003099 Prephenate dehydrogenase BED33_07705 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein BED33_07705 IPR011277 Chorismate mutase, T-protein BED33_07705 IPR002701 Chorismate mutase II, prokaryotic-type BED33_07705 IPR036979 Chorismate mutase domain superfamily BED33_07705 IPR036263 Chorismate mutase type II superfamily BED33_07705 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BED33_07705 IPR036291 NAD(P)-binding domain superfamily BED33_07710 IPR018528 Prephenate dehydratase, conserved site BED33_07710 IPR036263 Chorismate mutase type II superfamily BED33_07710 IPR036979 Chorismate mutase domain superfamily BED33_07710 IPR001086 Prephenate dehydratase BED33_07710 IPR002701 Chorismate mutase II, prokaryotic-type BED33_07710 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase BED33_07710 IPR002912 ACT domain BED33_07710 IPR010952 Chorismate mutase, gammaproteobacteria BED33_07715 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED33_07715 IPR003346 Transposase, IS116/IS110/IS902 BED33_07720 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_07720 IPR017730 Chaperonin ClpB BED33_07720 IPR019489 Clp ATPase, C-terminal BED33_07720 IPR036628 Clp, N-terminal domain superfamily BED33_07720 IPR004176 Clp, N-terminal BED33_07720 IPR001270 ClpA/B family BED33_07720 IPR018368 ClpA/B, conserved site 1 BED33_07720 IPR003959 ATPase, AAA-type, core BED33_07720 IPR028299 ClpA/B, conserved site 2 BED33_07720 IPR003593 AAA+ ATPase domain BED33_07720 IPR041546 ClpA/ClpB, AAA lid domain BED33_07730 IPR036986 RNA-binding S4 domain superfamily BED33_07730 IPR002942 RNA-binding S4 domain BED33_07730 IPR006145 Pseudouridine synthase, RsuA/RluA BED33_07730 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site BED33_07730 IPR006225 Pseudouridine synthase, RluC/RluD BED33_07730 IPR020103 Pseudouridine synthase, catalytic domain superfamily BED33_07735 IPR017689 Outer membrane protein assembly factor BamD BED33_07735 IPR039565 Outer membrane lipoprotein BamD-like BED33_07735 IPR011990 Tetratricopeptide-like helical domain superfamily BED33_07745 IPR003489 Ribosome hibernation promoting factor/RaiA BED33_07745 IPR036567 Ribosome hibernation promotion factor-like BED33_07750 IPR001207 Transposase, mutator type BED33_07755 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED33_07755 IPR003346 Transposase, IS116/IS110/IS902 BED33_07785 IPR017028 Uncharacterised conserved protein UCP034456 BED33_07785 IPR018736 Protein of unknown function DUF2279, periplasmic lipoprotein BED33_07790 IPR016270 CDP-alcohol phosphatidyltransferase class-II family BED33_07790 IPR025202 Phospholipase D-like domain BED33_07790 IPR001736 Phospholipase D/Transphosphatidylase BED33_07795 IPR003781 CoA-binding BED33_07795 IPR011761 ATP-grasp fold BED33_07795 IPR016181 Acyl-CoA N-acyltransferase BED33_07795 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain BED33_07795 IPR016102 Succinyl-CoA synthetase-like BED33_07795 IPR000182 GNAT domain BED33_07795 IPR036291 NAD(P)-binding domain superfamily BED33_07795 IPR013815 ATP-grasp fold, subdomain 1 BED33_07805 IPR005746 Thioredoxin BED33_07805 IPR017937 Thioredoxin, conserved site BED33_07805 IPR036249 Thioredoxin-like superfamily BED33_07805 IPR013766 Thioredoxin domain BED33_07810 IPR029064 50S ribosomal protein L30e-like BED33_07810 IPR004441 RNA methyltransferase TrmH family BED33_07810 IPR001537 tRNA/rRNA methyltransferase, SpoU type BED33_07810 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BED33_07810 IPR029028 Alpha/beta knot methyltransferases BED33_07810 IPR013123 RNA 2-O ribose methyltransferase, substrate binding BED33_07810 IPR016479 tRNA/rRNA methyltransferase, YfiF, predicted BED33_07815 IPR020846 Major facilitator superfamily domain BED33_07815 IPR011701 Major facilitator superfamily BED33_07815 IPR036259 MFS transporter superfamily BED33_07815 IPR004638 Drug resistance transporter EmrB-like BED33_07820 IPR005694 Efflux pump membrane protein BED33_07820 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BED33_07825 IPR010131 RND efflux system, outer membrane lipoprotein, NodT BED33_07825 IPR003423 Outer membrane efflux protein BED33_07830 IPR036390 Winged helix DNA-binding domain superfamily BED33_07830 IPR000835 MarR-type HTH domain BED33_07830 IPR023187 Transcriptional regulator MarR-type, conserved site BED33_07830 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_07835 IPR008407 Branched-chain amino acid transport, AzlD BED33_07840 IPR011606 Branched-chain amino acid transport, permease BED33_07845 IPR011701 Major facilitator superfamily BED33_07845 IPR020846 Major facilitator superfamily domain BED33_07845 IPR036259 MFS transporter superfamily BED33_07860 IPR014087 1-carboxybiuret hydrolase, AtzE subunit BED33_07860 IPR000120 Amidase BED33_07860 IPR023631 Amidase signature domain BED33_07860 IPR036928 Amidase signature (AS) superfamily BED33_07875 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BED33_07875 IPR018313 Solute-binding protein family 3, conserved site BED33_07875 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter BED33_07875 IPR001320 Ionotropic glutamate receptor BED33_07880 IPR035906 MetI-like superfamily BED33_07880 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED33_07880 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain BED33_07885 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain BED33_07885 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED33_07885 IPR035906 MetI-like superfamily BED33_07890 IPR003593 AAA+ ATPase domain BED33_07890 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_07890 IPR017871 ABC transporter, conserved site BED33_07890 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type BED33_07890 IPR003439 ABC transporter-like BED33_07905 IPR001110 Uncharacterised protein family UPF0012, conserved site BED33_07905 IPR036526 Carbon-nitrogen hydrolase superfamily BED33_07905 IPR003010 Carbon-nitrogen hydrolase BED33_07910 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED33_07910 IPR015424 Pyridoxal phosphate-dependent transferase BED33_07910 IPR004839 Aminotransferase, class I/classII BED33_07910 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED33_07915 IPR022000 Min27-like integrase, DNA-binding domain BED33_07915 IPR011010 DNA breaking-rejoining enzyme, catalytic core BED33_07915 IPR002104 Integrase, catalytic domain BED33_07915 IPR010998 Integrase/recombinase, N-terminal BED33_07915 IPR013762 Integrase-like, catalytic domain superfamily BED33_07925 IPR002052 DNA methylase, N-6 adenine-specific, conserved site BED33_07925 IPR007757 MT-A70-like BED33_07925 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED33_07970 IPR024432 Putative exodeoxyribonuclease 8, PDDEXK-like domain BED33_07970 IPR010584 Exodeoxyribonuclease 8 BED33_08050 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_08050 IPR002611 IstB-like ATP-binding protein BED33_08050 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein BED33_08085 IPR010774 Protein of unknown function DUF1364 BED33_08090 IPR036614 Holliday junction resolvase RusA-like superfamily BED33_08090 IPR016281 Crossover junction endodeoxyribonuclease, RusA BED33_08090 IPR008822 Holliday junction resolvase RusA-like BED33_08120 IPR004929 Spanin, inner membrane subunit BED33_08285 IPR017714 Methylthioribulose-1-phosphate dehydratase BED33_08285 IPR036409 Class II aldolase/adducin N-terminal domain superfamily BED33_08285 IPR001303 Class II aldolase/adducin N-terminal BED33_08290 IPR036412 HAD-like superfamily BED33_08290 IPR006439 HAD hydrolase, subfamily IA BED33_08290 IPR023214 HAD superfamily BED33_08290 IPR023943 Enolase-phosphatase E1 BED33_08295 IPR014710 RmlC-like jelly roll fold BED33_08295 IPR011051 RmlC-like cupin domain superfamily BED33_08295 IPR023956 Acireductone dioxygenase ARD, bacteria BED33_08295 IPR004313 Acireductone dioxygenase ARD family BED33_08300 IPR027363 Methylthioribose-1-phosphate isomerase, N-terminal BED33_08300 IPR037171 NagB/RpiA transferase-like BED33_08300 IPR011559 Initiation factor 2B alpha/beta/delta BED33_08300 IPR005251 Methylthioribose-1-phosphate isomerase BED33_08300 IPR000649 Initiation factor 2B-related BED33_08305 IPR009212 Methylthioribose kinase BED33_08305 IPR011009 Protein kinase-like domain superfamily BED33_08305 IPR002575 Aminoglycoside phosphotransferase BED33_08310 IPR013686 Polypeptide-transport-associated, ShlB-type BED33_08310 IPR005565 Haemolysin activator HlyB, C-terminal BED33_08310 IPR034746 POTRA domain BED33_08325 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type BED33_08325 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily BED33_08325 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily BED33_08325 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal BED33_08325 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal BED33_08325 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal BED33_08330 IPR001347 Sugar isomerase (SIS) BED33_08330 IPR035461 GmhA/DiaA BED33_08330 IPR004515 Phosphoheptose isomerase BED33_08335 IPR026869 Putative glutamine amidotransferase type 2 BED33_08335 IPR017932 Glutamine amidotransferase type 2 domain BED33_08335 IPR029055 Nucleophile aminohydrolases, N-terminal BED33_08340 IPR005490 L,D-transpeptidase catalytic domain BED33_08340 IPR038063 L,D-transpeptidase catalytic domain-like BED33_08345 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain BED33_08345 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A BED33_08350 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD BED33_08350 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B BED33_08355 IPR007329 FMN-binding BED33_08355 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C BED33_08360 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D BED33_08360 IPR003667 NqrDE/RnfAE BED33_08370 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BED33_08370 IPR036010 2Fe-2S ferredoxin-like superfamily BED33_08370 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain BED33_08370 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase BED33_08370 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain BED33_08370 IPR017927 FAD-binding domain, ferredoxin reductase-type BED33_08370 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F BED33_08370 IPR001433 Oxidoreductase FAD/NAD(P)-binding BED33_08370 IPR017938 Riboflavin synthase-like beta-barrel BED33_08370 IPR012675 Beta-grasp domain superfamily BED33_08375 IPR003374 ApbE-like superfamily BED33_08375 IPR042159 Flavin-trafficking protein ApbE BED33_08375 IPR024932 Flavin transferase ApbE BED33_08380 IPR007495 (Na+)-NQR maturation factor NqrM BED33_08385 IPR030395 Glycerophosphodiester phosphodiesterase domain BED33_08385 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily BED33_08390 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site BED33_08390 IPR016185 Pre-ATP-grasp domain superfamily BED33_08390 IPR013815 ATP-grasp fold, subdomain 1 BED33_08390 IPR005905 D-alanine--D-alanine ligase BED33_08390 IPR011761 ATP-grasp fold BED33_08390 IPR011127 D-alanine--D-alanine ligase, N-terminal domain BED33_08390 IPR011095 D-alanine--D-alanine ligase, C-terminal BED33_08395 IPR039445 Transcriptional regulator DauR-like, HTH domain BED33_08395 IPR039446 Transcriptional regulator DauR-like BED33_08395 IPR013559 YheO-like BED33_08400 IPR001926 Pyridoxal-phosphate dependent enzyme BED33_08400 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site BED33_08400 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BED33_08410 IPR036775 DNA polymerase, Y-family, little finger domain superfamily BED33_08410 IPR017961 DNA polymerase, Y-family, little finger domain BED33_08410 IPR022880 DNA polymerase IV BED33_08410 IPR024728 DNA polymerase type-Y, HhH motif BED33_08410 IPR001126 UmuC domain BED33_08415 IPR002933 Peptidase M20 BED33_08415 IPR011650 Peptidase M20, dimerisation domain BED33_08415 IPR001160 Peptidase M20C, Xaa-His dipeptidase BED33_08420 IPR000836 Phosphoribosyltransferase domain BED33_08420 IPR029057 Phosphoribosyltransferase-like BED33_08420 IPR023747 Xanthine-guanine phosphoribosyltransferase BED33_08425 IPR003346 Transposase, IS116/IS110/IS902 BED33_08425 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED33_08435 IPR038208 Sigma factor-binding protein Crl superfamily BED33_08435 IPR009986 Sigma factor-binding transcriptional regulator Crl BED33_08440 IPR036974 PUA domain superfamily BED33_08440 IPR015947 PUA-like superfamily BED33_08440 IPR002478 PUA domain BED33_08440 IPR019797 Glutamate 5-kinase, conserved site BED33_08440 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase BED33_08440 IPR001057 Glutamate/acetylglutamate kinase BED33_08440 IPR041739 Glutamate-5-kinase domain BED33_08440 IPR001048 Aspartate/glutamate/uridylate kinase BED33_08440 IPR011529 Glutamate 5-kinase BED33_08440 IPR036393 Acetylglutamate kinase-like superfamily BED33_08445 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site BED33_08445 IPR000965 GPR domain BED33_08445 IPR012134 Glutamate-5-semialdehyde dehydrogenase BED33_08445 IPR016161 Aldehyde/histidinol dehydrogenase BED33_08445 IPR015590 Aldehyde dehydrogenase domain BED33_08445 IPR016162 Aldehyde dehydrogenase, N-terminal BED33_08445 IPR016163 Aldehyde dehydrogenase, C-terminal BED33_08450 IPR000524 Transcription regulator HTH, GntR BED33_08450 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily BED33_08450 IPR011663 UbiC transcription regulator-associated BED33_08450 IPR036390 Winged helix DNA-binding domain superfamily BED33_08450 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_08455 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component BED33_08455 IPR013013 Phosphotransferase system, EIIC component, type 1 BED33_08455 IPR010975 Phosphotransferase system, alpha-glucoside-specific IIBC component BED33_08455 IPR036878 Glucose permease domain IIB BED33_08455 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site BED33_08455 IPR003352 Phosphotransferase system, EIIC BED33_08455 IPR001996 Phosphotransferase system, IIB component, type 1 BED33_08460 IPR036291 NAD(P)-binding domain superfamily BED33_08460 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal BED33_08460 IPR001088 Glycoside hydrolase, family 4 BED33_08460 IPR019802 Glycoside hydrolase, family 4, conserved site BED33_08460 IPR022616 Glycosyl hydrolase, family 4, C-terminal BED33_08465 IPR009875 PilZ domain BED33_08465 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal BED33_08465 IPR023787 Type III secretion system flagellar brake protein YcgR BED33_08465 IPR012349 FMN-binding split barrel BED33_08470 IPR008928 Six-hairpin glycosidase superfamily BED33_08470 IPR037824 NdvB, GH94N domain 2 BED33_08470 IPR033432 Glycosyl hydrolase 36, catalytic domain BED33_08470 IPR037820 NdvB, GH94N domain 1 BED33_08470 IPR011013 Galactose mutarotase-like domain superfamily BED33_08470 IPR019282 Domain of unknown function DUF2329 BED33_08470 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily BED33_08470 IPR009342 Putative carbohydrate binding domain BED33_08470 IPR010383 Glycosyl hydrolase 94 BED33_08470 IPR012341 Six-hairpin glycosidase-like superfamily BED33_08485 IPR013216 Methyltransferase type 11 BED33_08485 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED33_08505 IPR010105 TonB-dependent siderophore receptor BED33_08505 IPR012910 TonB-dependent receptor, plug domain BED33_08505 IPR039423 TonB-dependent receptor-like BED33_08505 IPR000531 TonB-dependent receptor-like, beta-barrel BED33_08505 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BED33_08505 IPR037066 TonB-dependent receptor, plug domain superfamily BED33_08510 IPR027544 Shikimate kinase 2 BED33_08510 IPR000623 Shikimate kinase/Threonine synthase-like 1 BED33_08510 IPR031322 Shikimate kinase/gluconokinase BED33_08510 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_08510 IPR023000 Shikimate kinase, conserved site BED33_08515 IPR014710 RmlC-like jelly roll fold BED33_08515 IPR011051 RmlC-like cupin domain superfamily BED33_08515 IPR009664 Pyrimidine/purine nucleoside phosphorylase BED33_08520 IPR007476 Putative exonuclease, RdgC BED33_08525 IPR000600 ROK family BED33_08530 IPR004592 Nuclease SbcC, gammaproteobacteria type BED33_08530 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_08530 IPR038729 Rad50/SbcC-type AAA domain BED33_08535 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain BED33_08535 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type BED33_08535 IPR029052 Metallo-dependent phosphatase-like BED33_08535 IPR004593 Nuclease SbcCD subunit D BED33_08535 IPR026843 Nuclease SbcCD subunit D, C-terminal domain BED33_08540 IPR011006 CheY-like superfamily BED33_08540 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_08540 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB BED33_08540 IPR001789 Signal transduction response regulator, receiver domain BED33_08540 IPR039420 Transcriptional regulatory protein WalR-like BED33_08540 IPR001867 OmpR/PhoB-type DNA-binding domain BED33_08545 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BED33_08545 IPR003594 Histidine kinase/HSP90-like ATPase BED33_08545 IPR035965 PAS domain superfamily BED33_08545 IPR021766 Phosphate regulon sensor protein PhoR BED33_08545 IPR000014 PAS domain BED33_08545 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR BED33_08545 IPR013767 PAS fold BED33_08545 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BED33_08545 IPR005467 Histidine kinase domain BED33_08545 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BED33_08545 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BED33_08550 IPR024370 PBP domain BED33_08550 IPR011862 Phosphate binding protein BED33_08555 IPR004685 Branched-chain amino acid transport system II carrier protein BED33_08560 IPR004840 Amino acid permease, conserved site BED33_08560 IPR004841 Amino acid permease/ SLC12A domain BED33_08565 IPR017069 Maltodextrin glucosidase BED33_08565 IPR014756 Immunoglobulin E-set BED33_08565 IPR017853 Glycoside hydrolase superfamily BED33_08565 IPR013780 Glycosyl hydrolase, all-beta BED33_08565 IPR006047 Glycosyl hydrolase, family 13, catalytic domain BED33_08565 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain BED33_08570 IPR036291 NAD(P)-binding domain superfamily BED33_08570 IPR002347 Short-chain dehydrogenase/reductase SDR BED33_08570 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase BED33_08570 IPR020904 Short-chain dehydrogenase/reductase, conserved site BED33_08575 IPR000101 Gamma-glutamyltranspeptidase BED33_08575 IPR029055 Nucleophile aminohydrolases, N-terminal BED33_08580 IPR018084 Hok/gef cell toxic protein, conserved site BED33_08580 IPR000021 Hok/gef cell toxic protein BED33_08585 IPR019479 Peroxiredoxin, C-terminal BED33_08585 IPR013766 Thioredoxin domain BED33_08585 IPR024706 Peroxiredoxin, AhpC-type BED33_08585 IPR036249 Thioredoxin-like superfamily BED33_08585 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant BED33_08590 IPR007431 Acyl carrier protein phosphodiesterase BED33_08590 IPR023491 Acyl carrier protein phosphodiesterase, gammaproteobacteria BED33_08595 IPR042118 QueA, domain 1 BED33_08595 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA BED33_08595 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily BED33_08595 IPR042119 QueA, domain 2 BED33_08605 IPR002616 tRNA-guanine(15) transglycosylase-like BED33_08605 IPR004803 tRNA-guanine transglycosylase BED33_08605 IPR036511 Queuine tRNA-ribosyltransferase-like BED33_08610 IPR003849 Preprotein translocase YajC BED33_08615 IPR027398 SecD export protein N-terminal TM domain BED33_08615 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial BED33_08615 IPR022645 Protein-export membrane protein SecD/SecF, bacterial BED33_08615 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site BED33_08615 IPR005791 Protein translocase subunit SecD BED33_08620 IPR005665 Protein-export membrane protein SecF, bacterial BED33_08620 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial BED33_08620 IPR022645 Protein-export membrane protein SecD/SecF, bacterial BED33_08620 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site BED33_08635 IPR005144 ATP-cone domain BED33_08635 IPR003796 Ribonucleotide reductase regulator NrdR-like BED33_08640 IPR024072 Dihydrofolate reductase-like domain superfamily BED33_08640 IPR004794 Riboflavin biosynthesis protein RibD BED33_08640 IPR016193 Cytidine deaminase-like BED33_08640 IPR002125 Cytidine and deoxycytidylate deaminase domain BED33_08640 IPR016192 APOBEC/CMP deaminase, zinc-binding BED33_08640 IPR011549 Riboflavin-specific deaminase, C-terminal BED33_08640 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal BED33_08645 IPR002180 Lumazine/riboflavin synthase BED33_08645 IPR034964 Lumazine synthase BED33_08645 IPR036467 Lumazine/riboflavin synthase superfamily BED33_08650 IPR006027 NusB/RsmB/TIM44 BED33_08650 IPR011605 NusB antitermination factor BED33_08650 IPR035926 NusB-like superfamily BED33_08655 IPR006283 Thiamine-monophosphate kinase BED33_08655 IPR036921 PurM-like, N-terminal domain superfamily BED33_08655 IPR016188 PurM-like, N-terminal domain BED33_08655 IPR036676 PurM-like, C-terminal domain superfamily BED33_08655 IPR010918 PurM-like, C-terminal domain BED33_08660 IPR026037 Phosphatidylglycerophosphatase A BED33_08660 IPR007686 YutG/PgpA domain BED33_08660 IPR036681 PgpA-like superfamily BED33_08665 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED33_08665 IPR003346 Transposase, IS116/IS110/IS902 BED33_08670 IPR005477 Deoxyxylulose-5-phosphate synthase BED33_08670 IPR029061 Thiamin diphosphate-binding fold BED33_08670 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II BED33_08670 IPR005475 Transketolase-like, pyrimidine-binding domain BED33_08670 IPR033248 Transketolase, C-terminal domain BED33_08670 IPR020826 Transketolase binding site BED33_08675 IPR008949 Isoprenoid synthase domain superfamily BED33_08675 IPR000092 Polyprenyl synthetase BED33_08675 IPR033749 Polyprenyl synthetase, conserved site BED33_08680 IPR037004 Exonuclease VII, small subunit superfamily BED33_08680 IPR003761 Exonuclease VII, small subunit BED33_08685 IPR020536 Thil, AANH domain BED33_08685 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED33_08685 IPR036873 Rhodanese-like domain superfamily BED33_08685 IPR003720 tRNA sulfurtransferase ThiI BED33_08685 IPR004114 THUMP domain BED33_08685 IPR001763 Rhodanese-like domain BED33_08685 IPR026340 Thiazole biosynthesis domain BED33_08690 IPR002818 DJ-1/PfpI BED33_08690 IPR029062 Class I glutamine amidotransferase-like BED33_08690 IPR006287 Protein/nucleic acid deglycase DJ-1 BED33_08695 IPR003710 Ketopantoate reductase ApbA/PanE BED33_08695 IPR013328 6-phosphogluconate dehydrogenase, domain 2 BED33_08695 IPR013752 Ketopantoate reductase, C-terminal domain BED33_08695 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BED33_08695 IPR013332 Ketopantoate reductase, N-terminal domain BED33_08695 IPR036291 NAD(P)-binding domain superfamily BED33_08700 IPR036183 YajQ-like superfamily BED33_08700 IPR035571 UPF0234-like, C-terminal BED33_08700 IPR007551 Protein of unknown function DUF520 BED33_08700 IPR035570 UPF0234, N-terminal BED33_08705 IPR011701 Major facilitator superfamily BED33_08705 IPR036259 MFS transporter superfamily BED33_08705 IPR020846 Major facilitator superfamily domain BED33_08710 IPR006369 Protohaem IX farnesyltransferase BED33_08710 IPR030470 UbiA prenyltransferase conserved site BED33_08710 IPR000537 UbiA prenyltransferase family BED33_08715 IPR014210 Cytochrome o ubiquinol oxidase subunit IV BED33_08715 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes BED33_08720 IPR014206 Cytochrome o ubiquinol oxidase, subunit III BED33_08720 IPR033946 Ubiquinol oxidase subunit III domain BED33_08720 IPR024791 Cytochrome c oxidase subunit III BED33_08720 IPR000298 Cytochrome c oxidase subunit III-like BED33_08720 IPR035973 Cytochrome c oxidase subunit III-like superfamily BED33_08720 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle BED33_08725 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site BED33_08725 IPR014207 Cytochrome o ubiquinol oxidase, subunit I BED33_08725 IPR023616 Cytochrome c oxidase-like, subunit I domain BED33_08725 IPR036927 Cytochrome c oxidase-like, subunit I superfamily BED33_08725 IPR000883 Cytochrome c oxidase subunit I BED33_08730 IPR002429 Cytochrome c oxidase subunit II-like C-terminal BED33_08730 IPR006333 Cytochrome o ubiquinol oxidase subunit II BED33_08730 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily BED33_08730 IPR010514 COX aromatic rich motif BED33_08730 IPR034227 Ubiquinol oxidase subunit 2, cupredoxin domain BED33_08730 IPR008972 Cupredoxin BED33_08730 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain BED33_08735 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like BED33_08735 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily BED33_08740 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 BED33_08740 IPR036259 MFS transporter superfamily BED33_08740 IPR011701 Major facilitator superfamily BED33_08740 IPR020846 Major facilitator superfamily domain BED33_08745 IPR012640 Membrane lipoprotein, lipid attachment site BED33_08745 IPR005619 Uncharacterised protein family, YajG BED33_08750 IPR002634 BolA protein BED33_08750 IPR036065 BolA-like superfamily BED33_08760 IPR027304 Trigger factor/SurA domain superfamily BED33_08760 IPR036611 Trigger factor ribosome-binding domain superfamily BED33_08760 IPR008881 Trigger factor, ribosome-binding, bacterial BED33_08760 IPR037041 Trigger factor, C-terminal domain superfamily BED33_08760 IPR008880 Trigger factor, C-terminal BED33_08760 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain BED33_08760 IPR005215 Trigger factor BED33_08765 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA BED33_08765 IPR033135 ClpP, histidine active site BED33_08765 IPR018215 ClpP, Ser active site BED33_08765 IPR001907 ATP-dependent Clp protease proteolytic subunit BED33_08765 IPR029045 ClpP/crotonase-like domain superfamily BED33_08770 IPR010603 Zinc finger, ClpX C4-type BED33_08770 IPR003959 ATPase, AAA-type, core BED33_08770 IPR038366 Zinc finger, ClpX C4-type superfamily BED33_08770 IPR003593 AAA+ ATPase domain BED33_08770 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_08770 IPR019489 Clp ATPase, C-terminal BED33_08770 IPR004487 Clp protease, ATP-binding subunit ClpX BED33_08775 IPR008269 Peptidase S16, Lon proteolytic domain BED33_08775 IPR004815 Lon protease, bacterial/eukaryotic-type BED33_08775 IPR003111 Lon, substrate-binding domain BED33_08775 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_08775 IPR003959 ATPase, AAA-type, core BED33_08775 IPR003593 AAA+ ATPase domain BED33_08775 IPR008268 Peptidase S16, active site BED33_08775 IPR015947 PUA-like superfamily BED33_08775 IPR020568 Ribosomal protein S5 domain 2-type fold BED33_08775 IPR027065 Lon protease BED33_08775 IPR027543 Lon protease, bacterial BED33_08775 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BED33_08780 IPR020816 Histone-like DNA-binding protein, conserved site BED33_08780 IPR000119 Histone-like DNA-binding protein BED33_08780 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily BED33_08785 IPR027304 Trigger factor/SurA domain superfamily BED33_08785 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type BED33_08785 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site BED33_08790 IPR004509 Competence protein ComEA, helix-hairpin-helix domain BED33_08790 IPR010994 RuvA domain 2-like BED33_08795 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family BED33_08795 IPR029069 HotDog domain superfamily BED33_08800 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED33_08800 IPR018317 Queuosine biosynthesis protein QueC BED33_08805 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain BED33_08805 IPR000914 Solute-binding protein family 5 domain BED33_08805 IPR039424 Solute-binding protein family 5 BED33_08810 IPR023938 HMP-PP phosphatase BED33_08810 IPR000150 Cof family BED33_08810 IPR036412 HAD-like superfamily BED33_08810 IPR006379 HAD-superfamily hydrolase, subfamily IIB BED33_08810 IPR023214 HAD superfamily BED33_08820 IPR011991 ArsR-like helix-turn-helix domain BED33_08820 IPR011008 Dimeric alpha-beta barrel BED33_08820 IPR019885 Transcription regulator HTH, AsnC-type, conserved site BED33_08820 IPR019888 Transcription regulator AsnC-type BED33_08820 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_08820 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain BED33_08820 IPR000485 AsnC-type HTH domain BED33_08820 IPR036390 Winged helix DNA-binding domain superfamily BED33_08825 IPR003439 ABC transporter-like BED33_08825 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_08825 IPR036640 ABC transporter type 1, transmembrane domain superfamily BED33_08825 IPR039421 Type I protein exporter BED33_08825 IPR011527 ABC transporter type 1, transmembrane domain BED33_08825 IPR017871 ABC transporter, conserved site BED33_08825 IPR003593 AAA+ ATPase domain BED33_08830 IPR039421 Type I protein exporter BED33_08830 IPR003593 AAA+ ATPase domain BED33_08830 IPR011527 ABC transporter type 1, transmembrane domain BED33_08830 IPR036640 ABC transporter type 1, transmembrane domain superfamily BED33_08830 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_08830 IPR017871 ABC transporter, conserved site BED33_08830 IPR003439 ABC transporter-like BED33_08835 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BED33_08835 IPR011322 Nitrogen regulatory PII-like, alpha/beta BED33_08835 IPR017918 Nitrogen regulatory protein PII, conserved site BED33_08835 IPR002332 Nitrogen regulatory protein P-II, urydylation site BED33_08835 IPR002187 Nitrogen regulatory protein PII BED33_08840 IPR001905 Ammonium transporter BED33_08840 IPR018047 Ammonium transporter, conserved site BED33_08840 IPR024041 Ammonium transporter AmtB-like domain BED33_08840 IPR029020 Ammonium/urea transporter BED33_08845 IPR029069 HotDog domain superfamily BED33_08845 IPR003703 Acyl-CoA thioesterase BED33_08850 IPR039366 YscW/ExsB BED33_08855 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_08855 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain BED33_08855 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding BED33_08865 IPR036666 HHA superfamily BED33_08865 IPR007985 Haemolysin expression modulating, HHA BED33_08870 IPR019693 Biofilm formation regulator YbaJ BED33_08880 IPR003593 AAA+ ATPase domain BED33_08880 IPR003439 ABC transporter-like BED33_08880 IPR017871 ABC transporter, conserved site BED33_08880 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_08885 IPR001626 ABC transporter, TroCD-like BED33_08885 IPR037294 ABC transporter, BtuC-like BED33_08890 IPR006129 Adhesin B BED33_08890 IPR006127 Periplasmic solute binding protein, ZnuA-like BED33_08890 IPR006128 Adhesion lipoprotein BED33_08895 IPR000473 Ribosomal protein L36 BED33_08895 IPR035977 Ribosomal protein L36 superfamily BED33_08900 IPR002150 Ribosomal protein L31 BED33_08900 IPR042105 Ribosomal protein L31 superfamily BED33_08900 IPR027493 Ribosomal protein L31 type B BED33_08900 IPR034704 L28p-like BED33_08905 IPR019733 Uncharacterised protein family YhfT BED33_08910 IPR021238 Protein of unknown function DUF2620 BED33_08915 IPR017850 Alkaline-phosphatase-like, core domain superfamily BED33_08915 IPR024052 Phosphopentomutase DeoB cap domain superfamily BED33_08915 IPR006124 Metalloenzyme BED33_08915 IPR010045 Phosphopentomutase BED33_08920 IPR001608 Alanine racemase, N-terminal BED33_08920 IPR029066 PLP-binding barrel BED33_08930 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BED33_08930 IPR001036 Acriflavin resistance protein BED33_08930 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 BED33_08935 IPR006143 RND efflux pump, membrane fusion protein BED33_08935 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BED33_08940 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BED33_08940 IPR013572 Transcription regulator MAATS, C-terminal BED33_08940 IPR009057 Homeobox-like domain superfamily BED33_08940 IPR023772 DNA-binding HTH domain, TetR-type, conserved site BED33_08940 IPR001647 DNA-binding HTH domain, TetR-type BED33_08945 IPR027396 DsrEFH-like BED33_08945 IPR003787 Sulphur relay, DsrE/F-like protein BED33_08955 IPR019630 Protein of unknown function DUF2496, YbaM-related BED33_08965 IPR007401 Protein of unknown function DUF454 BED33_08970 IPR000836 Phosphoribosyltransferase domain BED33_08970 IPR005764 Adenine phosphoribosyl transferase BED33_08970 IPR029057 Phosphoribosyltransferase-like BED33_08975 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily BED33_08975 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_08975 IPR021029 DNA polymerase III, tau subunit, domain V BED33_08975 IPR012763 DNA polymerase III, subunit gamma/ tau BED33_08975 IPR022754 DNA polymerase III, gamma subunit, domain III BED33_08975 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal BED33_08975 IPR001270 ClpA/B family BED33_08975 IPR003593 AAA+ ATPase domain BED33_08975 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV BED33_08980 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily BED33_08980 IPR004401 Nucleoid-associated protein YbaB/EbfC family BED33_08985 IPR023628 Recombination protein RecR, C4-type zinc finger BED33_08985 IPR000093 DNA recombination protein RecR BED33_08985 IPR034137 RecR, TOPRIM domain BED33_08985 IPR006171 TOPRIM domain BED33_08985 IPR023627 Recombination protein RecR BED33_08985 IPR015967 Recombination protein RecR, conserved site BED33_08990 IPR003594 Histidine kinase/HSP90-like ATPase BED33_08990 IPR020568 Ribosomal protein S5 domain 2-type fold BED33_08990 IPR020575 Heat shock protein Hsp90, N-terminal BED33_08990 IPR001404 Heat shock protein Hsp90 family BED33_08990 IPR037196 HSP90, C-terminal domain BED33_08990 IPR019805 Heat shock protein Hsp90, conserved site BED33_08990 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BED33_08995 IPR033690 Adenylate kinase, conserved site BED33_08995 IPR000850 Adenylate kinase/UMP-CMP kinase BED33_08995 IPR006259 Adenylate kinase subfamily BED33_08995 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_08995 IPR007862 Adenylate kinase, active site lid domain BED33_09000 IPR001015 Ferrochelatase BED33_09000 IPR033644 Ferrochelatase, C-terminal BED33_09000 IPR033659 Ferrochelatase, N-terminal BED33_09000 IPR019772 Ferrochelatase, active site BED33_09005 IPR002797 Polysaccharide biosynthesis protein BED33_09010 IPR002495 Glycosyl transferase, family 8 BED33_09010 IPR001173 Glycosyltransferase 2-like BED33_09010 IPR029044 Nucleotide-diphospho-sugar transferases BED33_09015 IPR029044 Nucleotide-diphospho-sugar transferases BED33_09015 IPR001173 Glycosyltransferase 2-like BED33_09020 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain BED33_09020 IPR001296 Glycosyl transferase, family 1 BED33_09025 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain BED33_09025 IPR001296 Glycosyl transferase, family 1 BED33_09030 IPR000715 Glycosyl transferase, family 4 BED33_09030 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site BED33_09035 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED33_09035 IPR036291 NAD(P)-binding domain superfamily BED33_09035 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain BED33_09040 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain BED33_09040 IPR001296 Glycosyl transferase, family 1 BED33_09045 IPR016040 NAD(P)-binding domain BED33_09045 IPR005886 UDP-glucose 4-epimerase BED33_09045 IPR036291 NAD(P)-binding domain superfamily BED33_09050 IPR011611 Carbohydrate kinase PfkB BED33_09050 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site BED33_09050 IPR029056 Ribokinase-like BED33_09055 IPR038770 Sodium/solute symporter superfamily BED33_09055 IPR003148 Regulator of K+ conductance, N-terminal BED33_09055 IPR036291 NAD(P)-binding domain superfamily BED33_09055 IPR006153 Cation/H+ exchanger BED33_09055 IPR004771 K+/H+ exchanger BED33_09060 IPR036259 MFS transporter superfamily BED33_09060 IPR020846 Major facilitator superfamily domain BED33_09060 IPR011701 Major facilitator superfamily BED33_09075 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily BED33_09075 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC BED33_09075 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain BED33_09080 IPR002816 TraB family BED33_09085 IPR023298 P-type ATPase, transmembrane domain superfamily BED33_09085 IPR008250 P-type ATPase, A domain superfamily BED33_09085 IPR023214 HAD superfamily BED33_09085 IPR036412 HAD-like superfamily BED33_09085 IPR027256 P-type ATPase, subfamily IB BED33_09085 IPR006121 Heavy metal-associated domain, HMA BED33_09085 IPR036163 Heavy metal-associated domain superfamily BED33_09085 IPR018303 P-type ATPase, phosphorylation site BED33_09085 IPR001757 P-type ATPase BED33_09085 IPR017969 Heavy-metal-associated, conserved site BED33_09085 IPR023299 P-type ATPase, cytoplasmic domain N BED33_09090 IPR000551 MerR-type HTH domain BED33_09090 IPR009061 Putative DNA-binding domain superfamily BED33_09090 IPR011789 Cu(I)-responsive transcriptional regulator BED33_09095 IPR002810 NfeD-like, C-terminal domain BED33_09100 IPR001972 Stomatin family BED33_09100 IPR032435 Band 7, C-terminal extension BED33_09100 IPR018080 Band 7/stomatin-like, conserved site BED33_09100 IPR001107 Band 7 domain BED33_09100 IPR036013 Band 7/SPFH domain superfamily BED33_09105 IPR011990 Tetratricopeptide-like helical domain superfamily BED33_09105 IPR013766 Thioredoxin domain BED33_09105 IPR036249 Thioredoxin-like superfamily BED33_09110 IPR002347 Short-chain dehydrogenase/reductase SDR BED33_09110 IPR020904 Short-chain dehydrogenase/reductase, conserved site BED33_09110 IPR036291 NAD(P)-binding domain superfamily BED33_09115 IPR036514 SGNH hydrolase superfamily BED33_09115 IPR008265 Lipase, GDSL, active site BED33_09115 IPR013830 SGNH hydrolase-type esterase domain BED33_09120 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_09120 IPR017871 ABC transporter, conserved site BED33_09120 IPR003439 ABC transporter-like BED33_09120 IPR003593 AAA+ ATPase domain BED33_09125 IPR038766 Membrane component of ABC transporter, predicted BED33_09130 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit BED33_09130 IPR011761 ATP-grasp fold BED33_09130 IPR013815 ATP-grasp fold, subdomain 1 BED33_09130 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type BED33_09130 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain BED33_09130 IPR011054 Rudiment single hybrid motif BED33_09130 IPR016185 Pre-ATP-grasp domain superfamily BED33_09135 IPR035893 PurE domain superfamily BED33_09135 IPR024694 PurE, prokaryotic type BED33_09135 IPR000031 PurE domain BED33_09135 IPR033747 Class I PurE BED33_09140 IPR010138 UDP-2,3-diacylglucosamine hydrolase BED33_09140 IPR029052 Metallo-dependent phosphatase-like BED33_09140 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type BED33_09145 IPR029000 Cyclophilin-like domain superfamily BED33_09145 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site BED33_09145 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase BED33_09145 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain BED33_09150 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR BED33_09150 IPR015803 Cysteine-tRNA ligase BED33_09150 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase BED33_09150 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED33_09150 IPR032678 tRNA synthetases class I, catalytic domain BED33_09150 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding BED33_09155 IPR002942 RNA-binding S4 domain BED33_09155 IPR036986 RNA-binding S4 domain superfamily BED33_09160 IPR036291 NAD(P)-binding domain superfamily BED33_09160 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase BED33_09160 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site BED33_09160 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BED33_09160 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BED33_09170 IPR002104 Integrase, catalytic domain BED33_09170 IPR010998 Integrase/recombinase, N-terminal BED33_09170 IPR011010 DNA breaking-rejoining enzyme, catalytic core BED33_09170 IPR013762 Integrase-like, catalytic domain superfamily BED33_09175 IPR002052 DNA methylase, N-6 adenine-specific, conserved site BED33_09175 IPR007757 MT-A70-like BED33_09175 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED33_09220 IPR024432 Putative exodeoxyribonuclease 8, PDDEXK-like domain BED33_09220 IPR010584 Exodeoxyribonuclease 8 BED33_09285 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein BED33_09285 IPR002611 IstB-like ATP-binding protein BED33_09285 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_09320 IPR010774 Protein of unknown function DUF1364 BED33_09325 IPR016281 Crossover junction endodeoxyribonuclease, RusA BED33_09325 IPR008822 Holliday junction resolvase RusA-like BED33_09325 IPR036614 Holliday junction resolvase RusA-like superfamily BED33_09370 IPR009052 DNA polymerase III-theta, bacterial BED33_09370 IPR036745 DNA polymerase III-theta superfamily BED33_09445 IPR035089 Tail sheath protein, subtilisin-like domain BED33_09445 IPR007067 Tail sheath protein BED33_09445 IPR020287 Tail sheath protein, C-terminal domain BED33_09505 IPR036514 SGNH hydrolase superfamily BED33_09505 IPR002656 Acyltransferase 3 BED33_09510 IPR013762 Integrase-like, catalytic domain superfamily BED33_09510 IPR010998 Integrase/recombinase, N-terminal BED33_09510 IPR011010 DNA breaking-rejoining enzyme, catalytic core BED33_09510 IPR002104 Integrase, catalytic domain BED33_09515 IPR007757 MT-A70-like BED33_09515 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED33_09515 IPR002052 DNA methylase, N-6 adenine-specific, conserved site BED33_09610 IPR039418 LexA-like BED33_09610 IPR001387 Cro/C1-type helix-turn-helix domain BED33_09610 IPR015927 Peptidase S24/S26A/S26B/S26C BED33_09610 IPR036286 LexA/Signal peptidase-like superfamily BED33_09610 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BED33_09635 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily BED33_09635 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_09635 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal BED33_09635 IPR007692 DNA helicase, DnaB type BED33_09635 IPR007694 DNA helicase, DnaB-like, C-terminal BED33_09635 IPR007693 DNA helicase, DnaB-like, N-terminal BED33_09635 IPR003593 AAA+ ATPase domain BED33_09685 IPR029052 Metallo-dependent phosphatase-like BED33_09685 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type BED33_09685 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase BED33_09725 IPR034690 Endolysin T4 type BED33_09725 IPR002196 Glycoside hydrolase, family 24 BED33_09725 IPR023346 Lysozyme-like domain superfamily BED33_09730 IPR004929 Spanin, inner membrane subunit BED33_09890 IPR004107 Integrase, SAM-like, N-terminal BED33_09890 IPR038488 Integrase, DNA-binding domain superfamily BED33_09890 IPR002104 Integrase, catalytic domain BED33_09890 IPR013762 Integrase-like, catalytic domain superfamily BED33_09890 IPR010998 Integrase/recombinase, N-terminal BED33_09890 IPR025166 Integrase, DNA-binding domain BED33_09890 IPR011010 DNA breaking-rejoining enzyme, catalytic core BED33_09895 IPR010998 Integrase/recombinase, N-terminal BED33_09895 IPR011010 DNA breaking-rejoining enzyme, catalytic core BED33_09895 IPR038488 Integrase, DNA-binding domain superfamily BED33_09895 IPR002104 Integrase, catalytic domain BED33_09895 IPR004107 Integrase, SAM-like, N-terminal BED33_09895 IPR013762 Integrase-like, catalytic domain superfamily BED33_09895 IPR025166 Integrase, DNA-binding domain BED33_09900 IPR004107 Integrase, SAM-like, N-terminal BED33_09900 IPR010998 Integrase/recombinase, N-terminal BED33_09900 IPR025166 Integrase, DNA-binding domain BED33_09900 IPR038488 Integrase, DNA-binding domain superfamily BED33_09900 IPR002104 Integrase, catalytic domain BED33_09900 IPR011010 DNA breaking-rejoining enzyme, catalytic core BED33_09900 IPR013762 Integrase-like, catalytic domain superfamily BED33_09915 IPR025758 Fic/DOC N-terminal BED33_09915 IPR040198 Fido domain-containing protein BED33_09915 IPR026287 Protein adenylyltransferase SoFic-like BED33_09915 IPR003812 Fido domain BED33_09915 IPR036597 Fido-like domain superfamily BED33_09970 IPR036286 LexA/Signal peptidase-like superfamily BED33_09970 IPR039418 LexA-like BED33_09970 IPR006197 Peptidase S24, LexA-like BED33_09970 IPR015927 Peptidase S24/S26A/S26B/S26C BED33_09980 IPR001867 OmpR/PhoB-type DNA-binding domain BED33_09980 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response BED33_09980 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_09980 IPR011006 CheY-like superfamily BED33_09980 IPR001789 Signal transduction response regulator, receiver domain BED33_09980 IPR039420 Transcriptional regulatory protein WalR-like BED33_09990 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED33_09990 IPR003346 Transposase, IS116/IS110/IS902 BED33_10000 IPR039994 JmjC domain-containing BED33_10000 IPR003347 JmjC domain BED33_10010 IPR002830 UbiD decarboxylyase family BED33_10010 IPR032903 UbiD-like decarboxylase/ferulic acid decarboxylase 1 BED33_10015 IPR011527 ABC transporter type 1, transmembrane domain BED33_10015 IPR036640 ABC transporter type 1, transmembrane domain superfamily BED33_10015 IPR003439 ABC transporter-like BED33_10015 IPR017871 ABC transporter, conserved site BED33_10015 IPR039421 Type I protein exporter BED33_10015 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_10015 IPR003593 AAA+ ATPase domain BED33_10030 IPR029052 Metallo-dependent phosphatase-like BED33_10030 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type BED33_10030 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase BED33_10045 IPR011129 Cold shock domain BED33_10045 IPR019844 Cold-shock (CSD) domain BED33_10045 IPR002059 Cold-shock protein, DNA-binding BED33_10045 IPR012340 Nucleic acid-binding, OB-fold BED33_10045 IPR012156 Cold shock, CspA BED33_10050 IPR012340 Nucleic acid-binding, OB-fold BED33_10050 IPR002059 Cold-shock protein, DNA-binding BED33_10050 IPR019844 Cold-shock (CSD) domain BED33_10050 IPR011129 Cold shock domain BED33_10050 IPR012156 Cold shock, CspA BED33_10055 IPR003691 Putative fluoride ion transporter CrcB BED33_10060 IPR000160 GGDEF domain BED33_10060 IPR007894 MASE2 BED33_10060 IPR029787 Nucleotide cyclase BED33_10065 IPR006312 Sec-independent protein translocase protein TatA/E BED33_10065 IPR003369 Sec-independent protein translocase protein TatA/B/E BED33_10065 IPR024905 Sec-independent protein translocase protein TatE BED33_10070 IPR031691 Lipoyl synthase, N-terminal BED33_10070 IPR003698 Lipoyl synthase BED33_10070 IPR006638 Elp3/MiaB/NifB BED33_10070 IPR013785 Aldolase-type TIM barrel BED33_10070 IPR007197 Radical SAM BED33_10075 IPR020605 Octanoyltransferase, conserved site BED33_10075 IPR000544 Octanoyltransferase BED33_10075 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain BED33_10080 IPR007454 Uncharacterised protein family UPF0250 BED33_10080 IPR027471 YbeD-like domain superfamily BED33_10085 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A BED33_10085 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal BED33_10085 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily BED33_10085 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal BED33_10085 IPR012338 Beta-lactamase/transpeptidase-like BED33_10085 IPR015956 Penicillin-binding protein, C-terminal domain superfamily BED33_10090 IPR012997 Rare lipoprotein A BED33_10090 IPR009009 RlpA-like protein, double-psi beta-barrel domain BED33_10090 IPR034718 Endolytic peptidoglycan transglycosylase RlpA BED33_10090 IPR036680 Sporulation-like domain superfamily BED33_10090 IPR007730 Sporulation-like domain BED33_10090 IPR036908 RlpA-like domain superfamily BED33_10095 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB BED33_10095 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA BED33_10095 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site BED33_10100 IPR017790 Penicillin-binding protein 2 BED33_10100 IPR001460 Penicillin-binding protein, transpeptidase BED33_10100 IPR036138 Penicillin-binding protein, dimerisation domain superfamily BED33_10100 IPR005311 Penicillin-binding protein, dimerisation domain BED33_10100 IPR012338 Beta-lactamase/transpeptidase-like BED33_10105 IPR029028 Alpha/beta knot methyltransferases BED33_10105 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BED33_10105 IPR003742 RNA methyltransferase RlmH BED33_10110 IPR004394 Protein Iojap/ribosomal silencing factor RsfS BED33_10115 IPR004821 Cytidyltransferase-like domain BED33_10115 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase BED33_10115 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED33_10120 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_10120 IPR010372 DNA polymerase III delta, N-terminal BED33_10120 IPR005790 DNA polymerase III, delta subunit BED33_10120 IPR032780 DNA polymerase III subunit delta, C-terminal BED33_10120 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal BED33_10125 IPR007485 LPS-assembly lipoprotein LptE BED33_10130 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site BED33_10130 IPR002300 Aminoacyl-tRNA synthetase, class Ia BED33_10130 IPR002302 Leucine-tRNA ligase BED33_10130 IPR025709 Leucyl-tRNA synthetase, editing domain BED33_10130 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding BED33_10130 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED33_10130 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding BED33_10130 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain BED33_10135 IPR009912 Zinc-ribbon containing domain BED33_10140 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type BED33_10140 IPR003439 ABC transporter-like BED33_10140 IPR017871 ABC transporter, conserved site BED33_10140 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_10140 IPR003593 AAA+ ATPase domain BED33_10145 IPR035906 MetI-like superfamily BED33_10145 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED33_10145 IPR030205 Glutamate/aspartate transport system permease protein GltK/AatM BED33_10145 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain BED33_10150 IPR030202 Glutamate/aspartate transport system permease protein GltJ/AatQ BED33_10150 IPR035906 MetI-like superfamily BED33_10150 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED33_10150 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain BED33_10155 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BED33_10165 IPR036526 Carbon-nitrogen hydrolase superfamily BED33_10165 IPR004563 Apolipoprotein N-acyltransferase BED33_10165 IPR003010 Carbon-nitrogen hydrolase BED33_10170 IPR005170 Transporter-associated domain BED33_10170 IPR016169 FAD-binding, type PCMH, subdomain 2 BED33_10170 IPR036318 FAD-binding, type PCMH-like superfamily BED33_10170 IPR000644 CBS domain BED33_10180 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_10180 IPR003714 PhoH-like protein BED33_10185 IPR002792 TRAM domain BED33_10185 IPR005839 Methylthiotransferase BED33_10185 IPR020612 Methylthiotransferase, conserved site BED33_10185 IPR013848 Methylthiotransferase, N-terminal BED33_10185 IPR038135 Methylthiotransferase, N-terminal domain superfamily BED33_10185 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB BED33_10185 IPR007197 Radical SAM BED33_10185 IPR023404 Radical SAM, alpha/beta horseshoe BED33_10185 IPR006638 Elp3/MiaB/NifB BED33_10190 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 BED33_10190 IPR002938 FAD-binding domain BED33_10190 IPR036188 FAD/NAD(P)-binding domain superfamily BED33_10190 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site BED33_10225 IPR006426 Asparagine synthase, glutamine-hydrolyzing BED33_10225 IPR033738 Asparagine synthase, N-terminal domain BED33_10225 IPR017932 Glutamine amidotransferase type 2 domain BED33_10225 IPR001962 Asparagine synthase BED33_10225 IPR029055 Nucleophile aminohydrolases, N-terminal BED33_10225 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED33_10230 IPR006357 HAD-superfamily hydrolase, subfamily IIA BED33_10230 IPR036412 HAD-like superfamily BED33_10230 IPR023214 HAD superfamily BED33_10235 IPR000835 MarR-type HTH domain BED33_10235 IPR036390 Winged helix DNA-binding domain superfamily BED33_10235 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_10235 IPR000600 ROK family BED33_10240 IPR003764 N-acetylglucosamine-6-phosphate deacetylase BED33_10240 IPR032466 Metal-dependent hydrolase BED33_10240 IPR006680 Amidohydrolase-related BED33_10240 IPR011059 Metal-dependent hydrolase, composite domain superfamily BED33_10245 IPR004547 Glucosamine-6-phosphate isomerase BED33_10245 IPR018321 Glucosamine-6-phosphate isomerase, conserved site BED33_10245 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase BED33_10245 IPR037171 NagB/RpiA transferase-like BED33_10255 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site BED33_10255 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal BED33_10255 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily BED33_10255 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain BED33_10255 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain BED33_10255 IPR000924 Glutamyl/glutaminyl-tRNA synthetase BED33_10255 IPR022861 Glutamine-tRNA ligase, bacterial BED33_10255 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily BED33_10255 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED33_10255 IPR004514 Glutamine-tRNA synthetase BED33_10260 IPR005318 Outer membrane porin, bacterial BED33_10260 IPR023614 Porin domain superfamily BED33_10265 IPR025727 YbfN-like lipoprotein BED33_10270 IPR004867 Chitobiase C-terminal domain BED33_10270 IPR025705 Beta-hexosaminidase BED33_10270 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain BED33_10270 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily BED33_10270 IPR015883 Glycoside hydrolase family 20, catalytic domain BED33_10270 IPR017853 Glycoside hydrolase superfamily BED33_10270 IPR029018 Beta-hexosaminidase-like, domain 2 BED33_10270 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal BED33_10270 IPR013783 Immunoglobulin-like fold BED33_10270 IPR012291 CBM2, carbohydrate-binding domain superfamily BED33_10270 IPR014756 Immunoglobulin E-set BED33_10275 IPR036390 Winged helix DNA-binding domain superfamily BED33_10275 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_10275 IPR002481 Ferric-uptake regulator BED33_10280 IPR008254 Flavodoxin/nitric oxide synthase BED33_10280 IPR010086 Flavodoxin, long chain BED33_10280 IPR001226 Flavodoxin, conserved site BED33_10280 IPR029039 Flavoprotein-like superfamily BED33_10285 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding BED33_10285 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily BED33_10285 IPR003660 HAMP domain BED33_10285 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BED33_10285 IPR004090 Chemotaxis methyl-accepting receptor BED33_10285 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site BED33_10290 IPR010985 Ribbon-helix-helix BED33_10290 IPR002145 Ribbon-helix-helix protein, CopG BED33_10295 IPR029058 Alpha/Beta hydrolase fold BED33_10295 IPR000073 Alpha/beta hydrolase fold-1 BED33_10300 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain BED33_10300 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily BED33_10300 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal BED33_10300 IPR010985 Ribbon-helix-helix BED33_10300 IPR005621 Negative modulator of initiation of replication SeqA BED33_10300 IPR013321 Arc-type ribbon-helix-helix BED33_10305 IPR005852 Phosphoglucomutase, alpha-D-glucose specific BED33_10305 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III BED33_10305 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II BED33_10305 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III BED33_10305 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I BED33_10305 IPR005843 Alpha-D-phosphohexomutase, C-terminal BED33_10305 IPR016066 Alpha-D-phosphohexomutase, conserved site BED33_10305 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily BED33_10315 IPR000620 EamA domain BED33_10320 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_10320 IPR039420 Transcriptional regulatory protein WalR-like BED33_10320 IPR001789 Signal transduction response regulator, receiver domain BED33_10320 IPR001867 OmpR/PhoB-type DNA-binding domain BED33_10320 IPR011006 CheY-like superfamily BED33_10325 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal BED33_10325 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BED33_10325 IPR025201 Sensor protein KdpD, transmembrane domain BED33_10325 IPR038318 KdpD, transmembrane domain superfamily BED33_10325 IPR029016 GAF-like domain superfamily BED33_10325 IPR003594 Histidine kinase/HSP90-like ATPase BED33_10325 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BED33_10325 IPR005467 Histidine kinase domain BED33_10325 IPR003018 GAF domain BED33_10325 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BED33_10325 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BED33_10330 IPR003820 Potassium-transporting ATPase C chain BED33_10335 IPR023299 P-type ATPase, cytoplasmic domain N BED33_10335 IPR023298 P-type ATPase, transmembrane domain superfamily BED33_10335 IPR008250 P-type ATPase, A domain superfamily BED33_10335 IPR036412 HAD-like superfamily BED33_10335 IPR018303 P-type ATPase, phosphorylation site BED33_10335 IPR001757 P-type ATPase BED33_10335 IPR006391 P-type ATPase, B chain, subfamily IA BED33_10340 IPR004623 Potassium-transporting ATPase A chain BED33_10345 IPR011726 K+ transporting P-type ATPase, F subunit BED33_10350 IPR019663 Uncharacterised protein YbfA BED33_10360 IPR003996 RTX toxin-activating protein C, bacteria BED33_10370 IPR013560 Domain of unknown function DUF1722 BED33_10375 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain BED33_10375 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED33_10375 IPR006050 DNA photolyase, N-terminal BED33_10375 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily BED33_10375 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily BED33_10375 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal BED33_10375 IPR002081 Cryptochrome/DNA photolyase class 1 BED33_10380 IPR024225 Cyclic-AMP phosphodiesterase class-II, conserved site BED33_10380 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BED33_10380 IPR000396 Cyclic-AMP phosphodiesterase, class-II BED33_10385 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily BED33_10385 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 BED33_10390 IPR003833 Carboxyltransferase domain, subdomain C and D BED33_10390 IPR010016 KipI family BED33_10390 IPR029000 Cyclophilin-like domain superfamily BED33_10395 IPR029000 Cyclophilin-like domain superfamily BED33_10395 IPR003778 Carboxyltransferase domain, subdomain A and B BED33_10400 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel BED33_10400 IPR005501 LamB/YcsF/PxpA-like BED33_10415 IPR033693 Pyroglutamyl peptidase I, Glu active site BED33_10415 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily BED33_10415 IPR000816 Peptidase C15, pyroglutamyl peptidase I BED33_10415 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like BED33_10415 IPR033694 Pyroglutamyl peptidase I, Cys active site BED33_10415 IPR029762 Pyroglutamyl peptidase I, bacterial-type BED33_10420 IPR002020 Citrate synthase BED33_10420 IPR010953 Citrate synthase, type I BED33_10420 IPR036969 Citrate synthase superfamily BED33_10420 IPR016142 Citrate synthase-like, large alpha subdomain BED33_10420 IPR016143 Citrate synthase-like, small alpha subdomain BED33_10420 IPR024176 Citrate synthase, bacterial-type BED33_10420 IPR019810 Citrate synthase active site BED33_10425 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit BED33_10425 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit BED33_10425 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit BED33_10425 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site BED33_10430 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit BED33_10430 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor BED33_10430 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit BED33_10435 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit BED33_10435 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain BED33_10435 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily BED33_10435 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal BED33_10435 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily BED33_10435 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site BED33_10435 IPR011281 Succinate dehydrogenase, flavoprotein subunit BED33_10435 IPR036188 FAD/NAD(P)-binding domain superfamily BED33_10440 IPR036010 2Fe-2S ferredoxin-like superfamily BED33_10440 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal BED33_10440 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein BED33_10440 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BED33_10440 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain BED33_10440 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BED33_10440 IPR009051 Alpha-helical ferredoxin BED33_10440 IPR012675 Beta-grasp domain superfamily BED33_10445 IPR005475 Transketolase-like, pyrimidine-binding domain BED33_10445 IPR011603 2-oxoglutarate dehydrogenase E1 component BED33_10445 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain BED33_10445 IPR001017 Dehydrogenase, E1 component BED33_10445 IPR029061 Thiamin diphosphate-binding fold BED33_10445 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal BED33_10445 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily BED33_10450 IPR006255 Dihydrolipoamide succinyltransferase BED33_10450 IPR011053 Single hybrid motif BED33_10450 IPR036625 E3-binding domain superfamily BED33_10450 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily BED33_10450 IPR000089 Biotin/lipoyl attachment BED33_10450 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain BED33_10450 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site BED33_10450 IPR004167 Peripheral subunit-binding domain BED33_10455 IPR016102 Succinyl-CoA synthetase-like BED33_10455 IPR005809 Succinate--CoA synthetase, beta subunit BED33_10455 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site BED33_10455 IPR013815 ATP-grasp fold, subdomain 1 BED33_10455 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type BED33_10455 IPR011761 ATP-grasp fold BED33_10455 IPR005811 ATP-citrate lyase/succinyl-CoA ligase BED33_10460 IPR036291 NAD(P)-binding domain superfamily BED33_10460 IPR005811 ATP-citrate lyase/succinyl-CoA ligase BED33_10460 IPR005810 Succinyl-CoA ligase, alpha subunit BED33_10460 IPR003781 CoA-binding BED33_10460 IPR016102 Succinyl-CoA synthetase-like BED33_10460 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site BED33_10460 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site BED33_10465 IPR019931 LPXTG cell wall anchor domain BED33_10465 IPR008334 5'-Nucleotidase, C-terminal BED33_10465 IPR036907 5'-Nucleotidase, C-terminal domain superfamily BED33_10465 IPR006146 5'-Nucleotidase, conserved site BED33_10465 IPR006179 5'-Nucleotidase/apyrase BED33_10465 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type BED33_10465 IPR041827 CpdB, N-terminal metallophosphatase domain BED33_10465 IPR029052 Metallo-dependent phosphatase-like BED33_10470 IPR002585 Cytochrome ubiquinol oxidase subunit 1 BED33_10475 IPR003317 Cytochrome ubiquinol oxidase subunit 2 BED33_10480 IPR011724 Cyd operon protein YbgT BED33_10480 IPR012994 Membrane bound YbgT-like BED33_10485 IPR011846 Cyd operon protein YbgE BED33_10490 IPR029069 HotDog domain superfamily BED33_10490 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site BED33_10490 IPR006683 Thioesterase domain BED33_10490 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase BED33_10490 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family BED33_10495 IPR014163 Tol-Pal system, TolQ BED33_10495 IPR002898 MotA/TolQ/ExbB proton channel BED33_10500 IPR014168 Tol-Pal system protein TolR BED33_10500 IPR003400 Biopolymer transport protein ExbD/TolR BED33_10505 IPR014161 Tol-Pal system, TolA BED33_10505 IPR014161 Tol-Pal system, TolA BED33_10510 IPR007195 TolB, N-terminal BED33_10510 IPR036752 TolB, N-terminal domain superfamily BED33_10510 IPR014167 Tol-Pal system protein TolB BED33_10510 IPR011659 WD40-like Beta Propeller BED33_10510 IPR011042 Six-bladed beta-propeller, TolB-like BED33_10515 IPR006664 Outer membrane protein, bacterial BED33_10515 IPR006665 OmpA-like domain BED33_10515 IPR006690 Outer membrane protein, OmpA-like, conserved site BED33_10515 IPR036737 OmpA-like domain superfamily BED33_10515 IPR039001 Peptidoglycan-associated lipoprotein BED33_10515 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal BED33_10520 IPR013026 Tetratricopeptide repeat-containing domain BED33_10520 IPR014162 Cell division coordinator CpoB, C-terminal BED33_10520 IPR019734 Tetratricopeptide repeat BED33_10520 IPR011990 Tetratricopeptide-like helical domain superfamily BED33_10520 IPR034706 Cell division coordinator CpoB BED33_10520 IPR032519 YbgF, trimerisation domain BED33_10545 IPR023513 Quinolinate synthase A, type 1 BED33_10545 IPR036094 Quinolinate synthetase A superfamily BED33_10545 IPR003473 Quinolinate synthetase A BED33_10550 IPR006419 Nicotinamide mononucleotide transporter PnuC BED33_10555 IPR036837 Cation efflux protein, cytoplasmic domain superfamily BED33_10555 IPR027469 Cation efflux transmembrane domain superfamily BED33_10555 IPR023500 Zinc transporter ZitB BED33_10555 IPR002524 Cation efflux protein BED33_10560 IPR006219 DHAP synthase, class 1 BED33_10560 IPR006218 DAHP synthetase I/KDSA BED33_10560 IPR013785 Aldolase-type TIM barrel BED33_10565 IPR013078 Histidine phosphatase superfamily, clade-1 BED33_10565 IPR029033 Histidine phosphatase superfamily BED33_10565 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site BED33_10565 IPR005952 Phosphoglycerate mutase 1 BED33_10570 IPR020821 Extracellular Endonuclease, subunit A BED33_10570 IPR001604 DNA/RNA non-specific endonuclease BED33_10570 IPR018524 DNA/RNA non-specific endonuclease, active site BED33_10570 IPR040255 Non-specific endonuclease BED33_10590 IPR015443 Aldose 1-epimerase BED33_10590 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase BED33_10590 IPR011013 Galactose mutarotase-like domain superfamily BED33_10590 IPR014718 Glycoside hydrolase-type carbohydrate-binding BED33_10590 IPR018052 Aldose 1-epimerase, conserved site BED33_10590 IPR013458 Aldose 1-epimerase, bacterial BED33_10595 IPR022963 Galactokinase, bacterial BED33_10595 IPR006204 GHMP kinase N-terminal domain BED33_10595 IPR036554 GHMP kinase, C-terminal domain superfamily BED33_10595 IPR000705 Galactokinase BED33_10595 IPR020568 Ribosomal protein S5 domain 2-type fold BED33_10595 IPR019741 Galactokinase, conserved site BED33_10595 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BED33_10595 IPR006203 GHMP kinase, ATP-binding, conserved site BED33_10595 IPR006206 Mevalonate/galactokinase BED33_10595 IPR013750 GHMP kinase, C-terminal domain BED33_10595 IPR019539 Galactokinase galactose-binding domain BED33_10600 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site BED33_10600 IPR001937 Galactose-1-phosphate uridyl transferase, class I BED33_10600 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal BED33_10600 IPR036265 HIT-like superfamily BED33_10600 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal BED33_10605 IPR005886 UDP-glucose 4-epimerase BED33_10605 IPR016040 NAD(P)-binding domain BED33_10605 IPR036291 NAD(P)-binding domain superfamily BED33_10615 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_10615 IPR003439 ABC transporter-like BED33_10615 IPR003593 AAA+ ATPase domain BED33_10620 IPR008995 Molybdate/tungstate binding, C-terminal BED33_10620 IPR003725 Molybdenum-binding protein ModE, N-terminal BED33_10620 IPR016462 Molybdate-dependent transcriptional regulator ModE BED33_10620 IPR036390 Winged helix DNA-binding domain superfamily BED33_10620 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_10620 IPR000847 Transcription regulator HTH, LysR BED33_10620 IPR005116 Transport-associated OB, type 1 BED33_10620 IPR004606 Molybdenum-pterin binding BED33_10625 IPR019702 Multidrug efflux pump accessory protein AcrZ BED33_10630 IPR005950 Molybdate ABC transporter, substrate-binding protein BED33_10635 IPR011867 Molybdate ABC transporter, permease protein BED33_10635 IPR035906 MetI-like superfamily BED33_10635 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED33_10640 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_10640 IPR005116 Transport-associated OB, type 1 BED33_10640 IPR017871 ABC transporter, conserved site BED33_10640 IPR011868 Molybdate ABC transporter, ATP-binding protein BED33_10640 IPR015852 ABC transporter, molybdenum import, ModC BED33_10640 IPR008995 Molybdate/tungstate binding, C-terminal BED33_10640 IPR003439 ABC transporter-like BED33_10640 IPR003593 AAA+ ATPase domain BED33_10640 IPR004606 Molybdenum-pterin binding BED33_10645 IPR000150 Cof family BED33_10645 IPR036412 HAD-like superfamily BED33_10645 IPR006379 HAD-superfamily hydrolase, subfamily IIB BED33_10645 IPR023214 HAD superfamily BED33_10650 IPR011045 Nitrous oxide reductase, N-terminal BED33_10650 IPR019405 Lactonase, 7-bladed beta propeller BED33_10650 IPR015943 WD40/YVTN repeat-like-containing domain superfamily BED33_10650 IPR022528 6-phosphogluconolactonase, YbhE-type BED33_10655 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA BED33_10655 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED33_10655 IPR005814 Aminotransferase class-III BED33_10655 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED33_10655 IPR015424 Pyridoxal phosphate-dependent transferase BED33_10660 IPR007197 Radical SAM BED33_10660 IPR010722 Biotin and thiamin synthesis-associated domain BED33_10660 IPR013785 Aldolase-type TIM barrel BED33_10660 IPR006638 Elp3/MiaB/NifB BED33_10660 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB BED33_10660 IPR024177 Biotin synthase BED33_10665 IPR004839 Aminotransferase, class I/classII BED33_10665 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type BED33_10665 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED33_10665 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED33_10665 IPR015424 Pyridoxal phosphate-dependent transferase BED33_10665 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria BED33_10665 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site BED33_10670 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC BED33_10670 IPR013216 Methyltransferase type 11 BED33_10670 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED33_10675 IPR004472 Dethiobiotin synthase BioD BED33_10675 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_10680 IPR003593 AAA+ ATPase domain BED33_10680 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type BED33_10680 IPR003439 ABC transporter-like BED33_10680 IPR017871 ABC transporter, conserved site BED33_10680 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_10685 IPR024759 UvrB, YAD/RRR-motif-containing domain BED33_10685 IPR041471 UvrB, interaction domain BED33_10685 IPR004807 UvrABC system, subunit B BED33_10685 IPR036876 UVR domain superfamily BED33_10685 IPR001943 UVR domain BED33_10685 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_10685 IPR014001 Helicase superfamily 1/2, ATP-binding domain BED33_10685 IPR006935 Helicase/UvrB, N-terminal BED33_10685 IPR001650 Helicase, C-terminal BED33_10690 IPR018668 DNA-binding protein VF530-like BED33_10690 IPR036361 SAP domain superfamily BED33_10695 IPR038136 Gluconeogenesis factor superfamily BED33_10695 IPR010119 Gluconeogenesis factor BED33_10695 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 BED33_10700 IPR010505 Molybdenum cofactor synthesis C-terminal BED33_10700 IPR006638 Elp3/MiaB/NifB BED33_10700 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site BED33_10700 IPR007197 Radical SAM BED33_10700 IPR013483 Molybdenum cofactor biosynthesis protein A BED33_10700 IPR013785 Aldolase-type TIM barrel BED33_10705 IPR023045 Molybdenum cofactor biosynthesis C BED33_10705 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain BED33_10705 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily BED33_10710 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp BED33_10710 IPR012675 Beta-grasp domain superfamily BED33_10710 IPR003749 Sulfur carrier ThiS/MoaD-like BED33_10715 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily BED33_10715 IPR003448 Molybdopterin biosynthesis MoaE BED33_10720 IPR006214 Bax inhibitor 1-related BED33_10725 IPR000412 ABC-2 transporter BED33_10730 IPR000412 ABC-2 transporter BED33_10735 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_10735 IPR003593 AAA+ ATPase domain BED33_10735 IPR003439 ABC transporter-like BED33_10735 IPR017871 ABC transporter, conserved site BED33_10740 IPR022936 Uncharacterised protein family UPF0194, membrane protein YbhG BED33_10740 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BED33_10745 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BED33_10745 IPR015292 Transcription regulator YbiH, C-terminal BED33_10745 IPR001647 DNA-binding HTH domain, TetR-type BED33_10745 IPR009057 Homeobox-like domain superfamily BED33_10745 IPR023772 DNA-binding HTH domain, TetR-type, conserved site BED33_10750 IPR014014 RNA helicase, DEAD-box type, Q motif BED33_10750 IPR011545 DEAD/DEAH box helicase domain BED33_10750 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site BED33_10750 IPR028622 ATP-dependent RNA helicase RhlE BED33_10750 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_10750 IPR001650 Helicase, C-terminal BED33_10750 IPR014001 Helicase superfamily 1/2, ATP-binding domain BED33_10755 IPR001269 tRNA-dihydrouridine synthase BED33_10755 IPR042270 tRNA-dihydrouridine(16) synthase, C-terminal BED33_10755 IPR032886 tRNA-dihydrouridine(16) synthase BED33_10755 IPR018517 tRNA-dihydrouridine synthase, conserved site BED33_10755 IPR013785 Aldolase-type TIM barrel BED33_10755 IPR035587 DUS-like, FMN-binding domain BED33_10765 IPR006668 Magnesium transporter, MgtE intracellular domain BED33_10765 IPR006667 SLC41 divalent cation transporters, integral membrane domain BED33_10765 IPR006669 Magnesium transporter MgtE BED33_10765 IPR038048 Magnesium transporter MgtE, transmembrane domain BED33_10765 IPR000644 CBS domain BED33_10765 IPR038076 MgtE, N-terminal domain superfamily BED33_10765 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily BED33_10770 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal BED33_10770 IPR012338 Beta-lactamase/transpeptidase-like BED33_10770 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A BED33_10775 IPR036318 FAD-binding, type PCMH-like superfamily BED33_10775 IPR006094 FAD linked oxidase, N-terminal BED33_10775 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal BED33_10775 IPR016169 FAD-binding, type PCMH, subdomain 2 BED33_10775 IPR016164 FAD-linked oxidase-like, C-terminal BED33_10775 IPR016167 FAD-binding, type PCMH, subdomain 1 BED33_10775 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 BED33_10775 IPR012256 D-lactate dehydrogenase BED33_10775 IPR016166 FAD-binding domain, PCMH-type BED33_10775 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 BED33_10780 IPR008173 Adenylyl cyclase CyaB BED33_10780 IPR023577 CYTH domain BED33_10780 IPR033469 CYTH-like domain superfamily BED33_10785 IPR003615 HNH nuclease BED33_10785 IPR002711 HNH endonuclease BED33_10795 IPR007341 Transglycosylase-associated protein BED33_10800 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_10800 IPR003439 ABC transporter-like BED33_10800 IPR017871 ABC transporter, conserved site BED33_10800 IPR012693 ABC transporter, phosphonate import, PhnC BED33_10800 IPR003593 AAA+ ATPase domain BED33_10805 IPR017797 Phosphonate ABC transporter, substrate-binding protein BED33_10805 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein BED33_10810 IPR005769 ABC transporter, permease PhnE/PtxC BED33_10810 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED33_10810 IPR035906 MetI-like superfamily BED33_10815 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED33_10815 IPR005769 ABC transporter, permease PhnE/PtxC BED33_10815 IPR035906 MetI-like superfamily BED33_10820 IPR009921 Domain of unknown function DUF1456 BED33_10830 IPR001851 ABC transporter, permease BED33_10835 IPR001851 ABC transporter, permease BED33_10840 IPR017871 ABC transporter, conserved site BED33_10840 IPR003439 ABC transporter-like BED33_10840 IPR012693 ABC transporter, phosphonate import, PhnC BED33_10840 IPR003593 AAA+ ATPase domain BED33_10840 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_10845 IPR003593 AAA+ ATPase domain BED33_10845 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein BED33_10845 IPR003439 ABC transporter-like BED33_10845 IPR017871 ABC transporter, conserved site BED33_10845 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_10850 IPR001763 Rhodanese-like domain BED33_10850 IPR036873 Rhodanese-like domain superfamily BED33_10850 IPR001307 Thiosulphate sulfurtransferase, conserved site BED33_10865 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain BED33_10875 IPR003593 AAA+ ATPase domain BED33_10875 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_10875 IPR003439 ABC transporter-like BED33_10875 IPR017871 ABC transporter, conserved site BED33_10880 IPR035906 MetI-like superfamily BED33_10880 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED33_10890 IPR002347 Short-chain dehydrogenase/reductase SDR BED33_10890 IPR036291 NAD(P)-binding domain superfamily BED33_10895 IPR036390 Winged helix DNA-binding domain superfamily BED33_10895 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_10895 IPR005119 LysR, substrate-binding BED33_10895 IPR000847 Transcription regulator HTH, LysR BED33_10905 IPR004779 Carboxylate/Amino Acid/Amine Transporter BED33_10905 IPR000620 EamA domain BED33_10915 IPR001702 Porin, Gram-negative type BED33_10915 IPR001897 Porin, gammaproteobacterial BED33_10915 IPR033900 Porin domain, Gram-negative type BED33_10915 IPR013793 Porin, Gram-negative type, conserved site BED33_10915 IPR023614 Porin domain superfamily BED33_10920 IPR010614 DEAD2 BED33_10920 IPR006555 ATP-dependent helicase, C-terminal BED33_10920 IPR001650 Helicase, C-terminal BED33_10920 IPR014001 Helicase superfamily 1/2, ATP-binding domain BED33_10920 IPR039000 ATP-dependent DNA helicase DinG BED33_10920 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_10920 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type BED33_10920 IPR006554 Helicase-like, DEXD box c2 type BED33_10925 IPR034294 Aquaporin transporter BED33_10925 IPR022357 Major intrinsic protein, conserved site BED33_10925 IPR023743 Aquaporin Z BED33_10925 IPR023271 Aquaporin-like BED33_10925 IPR000425 Major intrinsic protein BED33_10930 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily BED33_10930 IPR017459 Glycosyl transferase family 3, N-terminal domain BED33_10930 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily BED33_10950 IPR016909 Ribosomal RNA large subunit methyltransferase F BED33_10950 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED33_10950 IPR010286 METTL16/RlmF family BED33_10955 IPR013655 PAS fold-3 BED33_10955 IPR000700 PAS-associated, C-terminal BED33_10955 IPR000014 PAS domain BED33_10955 IPR035965 PAS domain superfamily BED33_10955 IPR001610 PAC motif BED33_10955 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BED33_10955 IPR004090 Chemotaxis methyl-accepting receptor BED33_10960 IPR003439 ABC transporter-like BED33_10960 IPR017871 ABC transporter, conserved site BED33_10960 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_10960 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type BED33_10960 IPR003593 AAA+ ATPase domain BED33_10965 IPR035906 MetI-like superfamily BED33_10965 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED33_10965 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain BED33_10970 IPR001320 Ionotropic glutamate receptor BED33_10970 IPR018313 Solute-binding protein family 3, conserved site BED33_10970 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BED33_10975 IPR020458 Zinc finger, DksA/TraR C4-type conserved site BED33_10975 IPR000962 Zinc finger, DksA/TraR C4-type BED33_10975 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria BED33_10980 IPR008331 Ferritin/DPS protein domain BED33_10980 IPR002177 DNA-binding protein Dps BED33_10980 IPR009078 Ferritin-like superfamily BED33_10980 IPR012347 Ferritin-like BED33_10980 IPR023067 DNA protection during starvation protein, gammaproteobacteria BED33_10980 IPR023188 DNA-binding protein Dps, conserved site BED33_10985 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal BED33_10985 IPR023506 Trans-aconitate 2-methyltransferase BED33_10985 IPR025714 Methyltransferase domain BED33_10985 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED33_11000 IPR000782 FAS1 domain BED33_11000 IPR036378 FAS1 domain superfamily BED33_11010 IPR000620 EamA domain BED33_11020 IPR000758 Virulence-related outer membrane protein BED33_11020 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel BED33_11020 IPR027385 Outer membrane protein beta-barrel domain BED33_11040 IPR003439 ABC transporter-like BED33_11040 IPR003593 AAA+ ATPase domain BED33_11040 IPR032781 ABC-transporter extension domain BED33_11040 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_11045 IPR003346 Transposase, IS116/IS110/IS902 BED33_11045 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED33_11050 IPR012730 Molybdopterin synthase sulfurylase MoeB BED33_11050 IPR000594 THIF-type NAD/FAD binding fold BED33_11050 IPR035985 Ubiquitin-activating enzyme BED33_11055 IPR001453 MoaB/Mog domain BED33_11055 IPR038987 Molybdopterin biosynthesis protein MoeA-like BED33_11055 IPR005111 MoeA, C-terminal, domain IV BED33_11055 IPR036688 MoeA, C-terminal, domain IV superfamily BED33_11055 IPR008284 Molybdenum cofactor biosynthesis, conserved site BED33_11055 IPR005110 MoeA, N-terminal and linker domain BED33_11055 IPR036425 MoaB/Mog-like domain superfamily BED33_11055 IPR036135 MoeA, N-terminal and linker domain superfamily BED33_11070 IPR003593 AAA+ ATPase domain BED33_11070 IPR017911 ABC transporter, macrolide export, ATP-binding domain BED33_11070 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_11070 IPR003439 ABC transporter-like BED33_11070 IPR017871 ABC transporter, conserved site BED33_11070 IPR003838 ABC transporter permease protein domain BED33_11070 IPR025857 MacB-like periplasmic core domain BED33_11090 IPR014186 S-formylglutathione hydrolase BED33_11090 IPR000801 Putative esterase BED33_11090 IPR029058 Alpha/Beta hydrolase fold BED33_11095 IPR020843 Polyketide synthase, enoylreductase domain BED33_11095 IPR036291 NAD(P)-binding domain superfamily BED33_11095 IPR011032 GroES-like superfamily BED33_11095 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site BED33_11095 IPR013154 Alcohol dehydrogenase, N-terminal BED33_11095 IPR013149 Alcohol dehydrogenase, C-terminal BED33_11095 IPR014183 Alcohol dehydrogenase class III BED33_11100 IPR005119 LysR, substrate-binding BED33_11100 IPR000847 Transcription regulator HTH, LysR BED33_11100 IPR036390 Winged helix DNA-binding domain superfamily BED33_11100 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_11105 IPR036259 MFS transporter superfamily BED33_11105 IPR010645 Uncharacterised MFS-type transporter YbfB BED33_11110 IPR018234 GTP cyclohydrolase I, conserved site BED33_11110 IPR020602 GTP cyclohydrolase I domain BED33_11110 IPR001474 GTP cyclohydrolase I BED33_11115 IPR007349 Domain of unknown function DUF418 BED33_11120 IPR000843 LacI-type HTH domain BED33_11120 IPR028082 Periplasmic binding protein-like I BED33_11120 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BED33_11125 IPR025997 Periplasmic binding protein BED33_11125 IPR028082 Periplasmic binding protein-like I BED33_11130 IPR015862 ABC transporter, galactose import, MglA BED33_11130 IPR017871 ABC transporter, conserved site BED33_11130 IPR003439 ABC transporter-like BED33_11130 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_11130 IPR003593 AAA+ ATPase domain BED33_11135 IPR001851 ABC transporter, permease BED33_11135 IPR030158 Galactoside transport system permease protein MglC BED33_11140 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BED33_11140 IPR029016 GAF-like domain superfamily BED33_11140 IPR009057 Homeobox-like domain superfamily BED33_11140 IPR025944 Sigma-54 interaction domain, conserved site BED33_11140 IPR002197 DNA binding HTH domain, Fis-type BED33_11140 IPR003018 GAF domain BED33_11140 IPR002078 RNA polymerase sigma factor 54 interaction domain BED33_11140 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_11140 IPR003593 AAA+ ATPase domain BED33_11150 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BED33_11150 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BED33_11155 IPR004420 Peptidase A31, hydrogenase maturation protease HycI BED33_11155 IPR000671 Peptidase A31 family BED33_11155 IPR023430 Peptidase HybD-like domain superfamily BED33_11160 IPR010005 Formate hydrogenlyase maturation HycH BED33_11165 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit BED33_11165 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit BED33_11170 IPR010226 NADH-quinone oxidoreductase, chain I BED33_11170 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BED33_11170 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BED33_11175 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily BED33_11175 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site BED33_11175 IPR029014 [NiFe]-hydrogenase, large subunit BED33_11175 IPR001501 Nickel-dependent hydrogenase, large subunit BED33_11175 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit BED33_11175 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily BED33_11175 IPR001135 NADH-quinone oxidoreductase, subunit D BED33_11180 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit BED33_11180 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal BED33_11185 IPR038730 Hydrogenase-4 component E-like BED33_11185 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like BED33_11190 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal BED33_11190 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit BED33_11195 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site BED33_11195 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H BED33_11200 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit BED33_11200 IPR003918 NADH:ubiquinone oxidoreductase BED33_11205 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BED33_11205 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BED33_11210 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site BED33_11210 IPR000688 Hydrogenase maturation factor HypA/HybF BED33_11215 IPR019812 Hydrogenase assembly chaperone, conserved site BED33_11215 IPR001109 Hydrogenase expression/formation protein, HupF/HypC BED33_11215 IPR037254 HupF/HypC superfamily BED33_11220 IPR003848 Domain of unknown function DUF218 BED33_11220 IPR023604 Uncharacterised protein family SanA BED33_11225 IPR012302 Malic enzyme, NAD-binding BED33_11225 IPR001891 Malic oxidoreductase BED33_11225 IPR037062 Malic enzyme, N-terminal domain superfamily BED33_11225 IPR023667 NAD-dependent malic enzyme, proteobacteria BED33_11225 IPR012301 Malic enzyme, N-terminal domain BED33_11225 IPR036291 NAD(P)-binding domain superfamily BED33_11225 IPR015884 Malic enzyme, conserved site BED33_11235 IPR020797 Cytidine deaminase, bacteria BED33_11235 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain BED33_11235 IPR016193 Cytidine deaminase-like BED33_11235 IPR016192 APOBEC/CMP deaminase, zinc-binding BED33_11235 IPR002125 Cytidine and deoxycytidylate deaminase domain BED33_11235 IPR006263 Cytidine deaminase, homodimeric BED33_11240 IPR005261 Conserved hypothetical protein CHP00659 BED33_11240 IPR007300 CidB/LrgB family BED33_11245 IPR022957 Uncharacterised protein family UPF0299 BED33_11245 IPR005538 LrgA/CidA family BED33_11250 IPR011701 Major facilitator superfamily BED33_11250 IPR036259 MFS transporter superfamily BED33_11250 IPR020846 Major facilitator superfamily domain BED33_11270 IPR023458 Methionine-tRNA ligase, type 1 BED33_11270 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal BED33_11270 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain BED33_11270 IPR015413 Methionyl/Leucyl tRNA synthetase BED33_11270 IPR002547 tRNA-binding domain BED33_11270 IPR033911 Methioninyl-tRNA synthetase core domain BED33_11270 IPR029038 Methionyl-tRNA synthetase, Zn-domain BED33_11270 IPR012340 Nucleic acid-binding, OB-fold BED33_11270 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED33_11270 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding BED33_11270 IPR014758 Methionyl-tRNA synthetase BED33_11270 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site BED33_11275 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_11275 IPR000808 Mrp, conserved site BED33_11275 IPR034904 Fe-S cluster assembly domain superfamily BED33_11275 IPR019591 Mrp/NBP35 ATP-binding protein BED33_11275 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 BED33_11280 IPR006083 Phosphoribulokinase/uridine kinase BED33_11280 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_11280 IPR000764 Uridine kinase-like BED33_11280 IPR026008 Uridine kinase BED33_11285 IPR033704 dUTPase, trimeric BED33_11285 IPR011962 dCTP deaminase BED33_11285 IPR029054 dUTPase-like BED33_11285 IPR036157 dUTPase-like superfamily BED33_11290 IPR007844 AsmA BED33_11295 IPR018385 C4-dicarboxylate anaerobic carrier-like BED33_11295 IPR004669 C4-dicarboxylate anaerobic carrier BED33_11300 IPR005496 Integral membrane protein TerC BED33_11300 IPR016169 FAD-binding, type PCMH, subdomain 2 BED33_11300 IPR005170 Transporter-associated domain BED33_11300 IPR000644 CBS domain BED33_11300 IPR036318 FAD-binding, type PCMH-like superfamily BED33_11310 IPR029044 Nucleotide-diphospho-sugar transferases BED33_11310 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form BED33_11310 IPR005835 Nucleotidyl transferase domain BED33_11315 IPR029044 Nucleotide-diphospho-sugar transferases BED33_11315 IPR001173 Glycosyltransferase 2-like BED33_11325 IPR013525 ABC-2 type transporter BED33_11330 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_11330 IPR003439 ABC transporter-like BED33_11330 IPR003593 AAA+ ATPase domain BED33_11335 IPR011051 RmlC-like cupin domain superfamily BED33_11335 IPR014710 RmlC-like jelly roll fold BED33_11335 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related BED33_11340 IPR036291 NAD(P)-binding domain superfamily BED33_11340 IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase BED33_11340 IPR001509 NAD-dependent epimerase/dehydratase BED33_11345 IPR029044 Nucleotide-diphospho-sugar transferases BED33_11345 IPR001173 Glycosyltransferase 2-like BED33_11345 IPR001296 Glycosyl transferase, family 1 BED33_11360 IPR001207 Transposase, mutator type BED33_11385 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type BED33_11385 IPR005835 Nucleotidyl transferase domain BED33_11385 IPR029044 Nucleotide-diphospho-sugar transferases BED33_11390 IPR029044 Nucleotide-diphospho-sugar transferases BED33_11390 IPR005835 Nucleotidyl transferase domain BED33_11390 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type BED33_11395 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BED33_11395 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating BED33_11395 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding BED33_11395 IPR006184 6-phosphogluconate-binding site BED33_11395 IPR036291 NAD(P)-binding domain superfamily BED33_11395 IPR006183 6-phosphogluconate dehydrogenase BED33_11395 IPR006114 6-phosphogluconate dehydrogenase, C-terminal BED33_11395 IPR013328 6-phosphogluconate dehydrogenase, domain 2 BED33_11400 IPR023019 Histidine biosynthesis bifunctional protein HisIE BED33_11400 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like BED33_11400 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily BED33_11400 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain BED33_11400 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase BED33_11405 IPR004651 Histidine biosynthesis, HisF BED33_11405 IPR013785 Aldolase-type TIM barrel BED33_11405 IPR011060 Ribulose-phosphate binding barrel BED33_11405 IPR006062 Histidine biosynthesis BED33_11410 IPR013785 Aldolase-type TIM barrel BED33_11410 IPR006062 Histidine biosynthesis BED33_11410 IPR011060 Ribulose-phosphate binding barrel BED33_11410 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA BED33_11410 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase BED33_11415 IPR029062 Class I glutamine amidotransferase-like BED33_11415 IPR017926 Glutamine amidotransferase BED33_11415 IPR010139 Imidazole glycerol phosphate synthase, subunit H BED33_11420 IPR000807 Imidazoleglycerol-phosphate dehydratase BED33_11420 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site BED33_11420 IPR006543 Histidinol-phosphate phosphatase BED33_11420 IPR005954 Histidinol-phosphatase BED33_11420 IPR020566 Histidine biosynthesis bifunctional protein HisB BED33_11420 IPR023214 HAD superfamily BED33_11420 IPR006549 HAD-superfamily hydrolase,subfamily IIIA BED33_11420 IPR036412 HAD-like superfamily BED33_11420 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily BED33_11420 IPR020568 Ribosomal protein S5 domain 2-type fold BED33_11425 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site BED33_11425 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED33_11425 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED33_11425 IPR004839 Aminotransferase, class I/classII BED33_11425 IPR015424 Pyridoxal phosphate-dependent transferase BED33_11425 IPR005861 Histidinol-phosphate aminotransferase family BED33_11430 IPR022695 Histidinol dehydrogenase, monofunctional BED33_11430 IPR001692 Histidinol dehydrogenase, conserved site BED33_11430 IPR012131 Histidinol dehydrogenase BED33_11430 IPR016161 Aldehyde/histidinol dehydrogenase BED33_11435 IPR013115 Histidine biosynthesis HisG, C-terminal BED33_11435 IPR001348 ATP phosphoribosyltransferase HisG BED33_11435 IPR020621 ATP phosphoribosyltransferase HisG, long form BED33_11435 IPR013820 ATP phosphoribosyltransferase, catalytic domain BED33_11435 IPR018198 ATP phosphoribosyltransferase, conserved site BED33_11435 IPR011322 Nitrogen regulatory PII-like, alpha/beta BED33_11435 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BED33_11445 IPR001851 ABC transporter, permease BED33_11450 IPR003593 AAA+ ATPase domain BED33_11450 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_11450 IPR015861 ABC transporter, ribose import, RbsA BED33_11450 IPR017871 ABC transporter, conserved site BED33_11450 IPR003439 ABC transporter-like BED33_11455 IPR018211 Alcohol dehydrogenase, iron-type, conserved site BED33_11455 IPR016205 Glycerol dehydrogenase BED33_11455 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA BED33_11465 IPR002293 Amino acid/polyamine transporter I BED33_11470 IPR034747 Exonuclease I, SH3-like domain BED33_11470 IPR034748 Exonuclease I, C-terminal alpha-helical domain BED33_11470 IPR038649 Exonuclease I, SH3-like domain superfamily BED33_11470 IPR013620 Exodeoxyribonuclease I, C-terminal BED33_11470 IPR013520 Exonuclease, RNase T/DNA polymerase III BED33_11470 IPR036397 Ribonuclease H superfamily BED33_11470 IPR012337 Ribonuclease H-like superfamily BED33_11470 IPR023607 Exodeoxyribonuclease I BED33_11475 IPR010080 Thioester reductase-like domain BED33_11475 IPR020845 AMP-binding, conserved site BED33_11475 IPR000873 AMP-dependent synthetase/ligase BED33_11475 IPR042099 AMP-dependent synthetase-like superfamily BED33_11475 IPR013120 Male sterility, NAD-binding BED33_11475 IPR036291 NAD(P)-binding domain superfamily BED33_11475 IPR020806 Polyketide synthase, phosphopantetheine-binding domain BED33_11475 IPR036736 ACP-like superfamily BED33_11475 IPR009081 Phosphopantetheine binding ACP domain BED33_11480 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein BED33_11485 IPR007458 Protein of unknown function DUF496 BED33_11490 IPR001851 ABC transporter, permease BED33_11495 IPR001851 ABC transporter, permease BED33_11505 IPR025997 Periplasmic binding protein BED33_11505 IPR028082 Periplasmic binding protein-like I BED33_11510 IPR006204 GHMP kinase N-terminal domain BED33_11510 IPR012363 Propanediol utilisation/coumermycin biosynthesis, PduX-related BED33_11510 IPR020568 Ribosomal protein S5 domain 2-type fold BED33_11510 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BED33_11515 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED33_11515 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED33_11515 IPR015424 Pyridoxal phosphate-dependent transferase BED33_11515 IPR004839 Aminotransferase, class I/classII BED33_11515 IPR005860 L-threonine-O-3-phosphate decarboxylase BED33_11515 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site BED33_11520 IPR014776 Tetrapyrrole methylase, subdomain 2 BED33_11520 IPR000878 Tetrapyrrole methylase BED33_11520 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site BED33_11520 IPR035996 Tetrapyrrole methylase superfamily BED33_11520 IPR014777 Tetrapyrrole methylase, subdomain 1 BED33_11520 IPR012409 Sirohaem synthase BED33_11520 IPR006367 Sirohaem synthase, N-terminal BED33_11520 IPR028281 Siroheme synthase, central domain BED33_11520 IPR006366 Uroporphyrin-III C-methyltransferase BED33_11520 IPR036291 NAD(P)-binding domain superfamily BED33_11520 IPR037115 Sirohaem synthase, dimerisation domain superfamily BED33_11520 IPR019478 Sirohaem synthase, dimerisation domain BED33_11525 IPR004372 Acetate/propionate kinase BED33_11525 IPR000890 Aliphatic acid kinase, short-chain BED33_11525 IPR023865 Aliphatic acid kinase, short-chain, conserved site BED33_11525 IPR024896 Propionate kinase PduW BED33_11530 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV BED33_11530 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_11535 IPR000249 Microcompartment protein, bacteria BED33_11535 IPR037233 CcmK-like superfamily BED33_11535 IPR009307 Ethanolamine utilisation EutS BED33_11545 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC BED33_11545 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily BED33_11545 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BED33_11545 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BED33_11545 IPR009051 Alpha-helical ferredoxin BED33_11545 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain BED33_11545 IPR019554 Soluble ligand binding domain BED33_11545 IPR026902 RnfC Barrel sandwich hybrid domain BED33_11550 IPR039697 Iron-type alcohol dehydrogenase-like BED33_11550 IPR018211 Alcohol dehydrogenase, iron-type, conserved site BED33_11550 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA BED33_11555 IPR016163 Aldehyde dehydrogenase, C-terminal BED33_11555 IPR016162 Aldehyde dehydrogenase, N-terminal BED33_11555 IPR015590 Aldehyde dehydrogenase domain BED33_11555 IPR016161 Aldehyde/histidinol dehydrogenase BED33_11555 IPR012408 Acetaldehyde/propionaldehyde dehydrogenase, EutE/PduP-related BED33_11560 IPR036451 Cobalamin adenosyltransferase-like superfamily BED33_11560 IPR016030 Cobalamin adenosyltransferase-like BED33_11560 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type BED33_11565 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml BED33_11565 IPR036677 EutN/Ccml superfamily BED33_11575 IPR008300 Phosphate propanoyltransferase BED33_11585 IPR037233 CcmK-like superfamily BED33_11585 IPR000249 Microcompartment protein, bacteria BED33_11585 IPR020808 Bacterial microcompartments protein, conserved site BED33_11595 IPR028975 Diol dehydratase-reactivating factor, alpha subunit, swiveling domain superfamily BED33_11595 IPR040916 DD-reactivating factor swiveling domain BED33_11595 IPR009191 Diol dehydratase-reactivating factor alpha subunit BED33_11595 IPR030994 Diol dehydratase reactivase ATPase-like domain BED33_11600 IPR003207 Propanediol/glycerol dehydratase, small subunit BED33_11600 IPR036091 Propanediol/glycerol dehydratase, small subunit superfamily BED33_11605 IPR010254 B12-dependent dehydratases, beta subunit BED33_11605 IPR003208 Diol/glycerol dehydratase/dehydratase reactivating factor BED33_11605 IPR025541 Propanediol/glycerol dehydratase, medium subunit BED33_11610 IPR036999 Diol/glycerol dehydratase, large subunit superfamily BED33_11610 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic BED33_11610 IPR003206 Diol/glycerol dehydratase, large subunit BED33_11615 IPR030984 Microcompartment protein PduB BED33_11615 IPR000249 Microcompartment protein, bacteria BED33_11615 IPR009193 Polyhedral organelle shell protein, EutL/PduB type BED33_11615 IPR037233 CcmK-like superfamily BED33_11620 IPR000249 Microcompartment protein, bacteria BED33_11620 IPR020808 Bacterial microcompartments protein, conserved site BED33_11620 IPR037233 CcmK-like superfamily BED33_11625 IPR022357 Major intrinsic protein, conserved site BED33_11625 IPR000425 Major intrinsic protein BED33_11625 IPR023271 Aquaporin-like BED33_11630 IPR009057 Homeobox-like domain superfamily BED33_11630 IPR018771 PocR domain BED33_11630 IPR018060 DNA binding HTH domain, AraC-type BED33_11630 IPR018062 HTH domain AraC-type, conserved site BED33_11630 IPR020449 Transcription regulator HTH, AraC- type BED33_11635 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_11635 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA BED33_11635 IPR011698 CobB/CobQ-like glutamine amidotransferase BED33_11635 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain BED33_11635 IPR017929 CobB/CobQ glutamine amidotransferase BED33_11635 IPR029062 Class I glutamine amidotransferase-like BED33_11645 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily BED33_11645 IPR003722 Cobalamin biosynthesis precorrin-8X methylmutase CobH/CbiC BED33_11650 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD BED33_11650 IPR036074 CbiD superfamily BED33_11655 IPR000878 Tetrapyrrole methylase BED33_11655 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase BED33_11655 IPR014777 Tetrapyrrole methylase, subdomain 1 BED33_11655 IPR035996 Tetrapyrrole methylase superfamily BED33_11660 IPR007848 Methyltransferase small domain BED33_11660 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED33_11660 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit BED33_11665 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site BED33_11665 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase BED33_11665 IPR035996 Tetrapyrrole methylase superfamily BED33_11665 IPR000878 Tetrapyrrole methylase BED33_11665 IPR014777 Tetrapyrrole methylase, subdomain 1 BED33_11665 IPR014776 Tetrapyrrole methylase, subdomain 2 BED33_11670 IPR002750 CobE/GbiG C-terminal domain BED33_11670 IPR036518 CobE/GbiG C-terminal domain superfamily BED33_11670 IPR038029 GbiG N-terminal domain superfamily BED33_11670 IPR021745 Cobalamin biosynthesis central region BED33_11670 IPR021744 Cobalamin synthesis G, N-terminal BED33_11675 IPR035996 Tetrapyrrole methylase superfamily BED33_11675 IPR000878 Tetrapyrrole methylase BED33_11675 IPR014777 Tetrapyrrole methylase, subdomain 1 BED33_11675 IPR014776 Tetrapyrrole methylase, subdomain 2 BED33_11675 IPR006363 Precorrin-3B C17-methyltransferase domain BED33_11680 IPR003723 Precorrin-6x reductase BED33_11685 IPR010388 Anaerobic cobalt chelatase BED33_11690 IPR000878 Tetrapyrrole methylase BED33_11690 IPR014776 Tetrapyrrole methylase, subdomain 2 BED33_11690 IPR014777 Tetrapyrrole methylase, subdomain 1 BED33_11690 IPR035996 Tetrapyrrole methylase superfamily BED33_11690 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site BED33_11690 IPR012382 Precorrin-2 C(20)-methyltransferase BED33_11690 IPR006364 Precorrin-2 C(20)-methyltransferase domain BED33_11695 IPR002751 Metal transport protein CbiM/NikMN BED33_11695 IPR018024 Cobalamin (vitamin B12) transport protein CbiM BED33_11700 IPR003705 Cobalt transport protein CbiN BED33_11705 IPR012809 Cobalt ECF transporter T component CbiQ BED33_11705 IPR003339 ABC/ECF transporter, transmembrane component BED33_11710 IPR005876 Cobalt transport protein ATP-binding subunit BED33_11710 IPR003593 AAA+ ATPase domain BED33_11710 IPR003439 ABC transporter-like BED33_11710 IPR017871 ABC transporter, conserved site BED33_11710 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_11710 IPR015856 ABC transporter, CbiO/EcfA subunit BED33_11715 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_11715 IPR029062 Class I glutamine amidotransferase-like BED33_11715 IPR017929 CobB/CobQ glutamine amidotransferase BED33_11715 IPR033949 Cobyric acid synthase, glutamine amidotransferase type 1 BED33_11715 IPR004459 Cobyric acid synthase CobQ BED33_11715 IPR011698 CobB/CobQ-like glutamine amidotransferase BED33_11725 IPR003805 Adenosylcobinamide-GDP ribazoletransferase BED33_11730 IPR017578 Alpha-ribazole phosphatase, CobC BED33_11730 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site BED33_11730 IPR013078 Histidine phosphatase superfamily, clade-1 BED33_11730 IPR029033 Histidine phosphatase superfamily BED33_11735 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily BED33_11735 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic BED33_11735 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal BED33_11735 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like BED33_11780 IPR037026 Vgr protein, OB-fold domain superfamily BED33_11780 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein BED33_11780 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset BED33_11780 IPR006531 Gp5 N-terminal BED33_11805 IPR018223 Argininosuccinate synthase, conserved site BED33_11805 IPR001518 Argininosuccinate synthase BED33_11805 IPR023437 Argininosuccinate synthase, type 2 subfamily BED33_11805 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED33_11805 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail BED33_11805 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body BED33_11810 IPR002528 Multi antimicrobial extrusion protein BED33_11820 IPR013785 Aldolase-type TIM barrel BED33_11820 IPR022998 Thiamine phosphate synthase/TenI BED33_11820 IPR036206 Thiamin phosphate synthase superfamily BED33_11820 IPR034291 Thiamine phosphate synthase BED33_11825 IPR000150 Cof family BED33_11825 IPR006379 HAD-superfamily hydrolase, subfamily IIB BED33_11825 IPR036412 HAD-like superfamily BED33_11825 IPR023214 HAD superfamily BED33_11830 IPR014036 DeoR C-terminal sensor domain BED33_11830 IPR036390 Winged helix DNA-binding domain superfamily BED33_11830 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_11830 IPR018356 Transcription regulator, HTH DeoR-type, conserved site BED33_11830 IPR001034 DeoR-type HTH domain BED33_11830 IPR037171 NagB/RpiA transferase-like BED33_11835 IPR012338 Beta-lactamase/transpeptidase-like BED33_11835 IPR001466 Beta-lactamase-related BED33_11835 IPR023650 Beta-lactamase, class-A active site BED33_11840 IPR002545 CheW-like domain BED33_11840 IPR024181 Chemotaxis response regulator CheV BED33_11840 IPR036061 CheW-like domain superfamily BED33_11840 IPR011006 CheY-like superfamily BED33_11840 IPR001789 Signal transduction response regulator, receiver domain BED33_11850 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_11850 IPR036390 Winged helix DNA-binding domain superfamily BED33_11850 IPR000524 Transcription regulator HTH, GntR BED33_11850 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED33_11850 IPR015424 Pyridoxal phosphate-dependent transferase BED33_11850 IPR004839 Aminotransferase, class I/classII BED33_11860 IPR013752 Ketopantoate reductase, C-terminal domain BED33_11860 IPR013332 Ketopantoate reductase, N-terminal domain BED33_11860 IPR036291 NAD(P)-binding domain superfamily BED33_11860 IPR003710 Ketopantoate reductase ApbA/PanE BED33_11860 IPR013328 6-phosphogluconate dehydrogenase, domain 2 BED33_11860 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BED33_11870 IPR003593 AAA+ ATPase domain BED33_11870 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_11870 IPR017871 ABC transporter, conserved site BED33_11870 IPR008995 Molybdate/tungstate binding, C-terminal BED33_11870 IPR003439 ABC transporter-like BED33_11870 IPR013611 Transport-associated OB, type 2 BED33_11870 IPR015853 ABC transporter, ferric cation import, FbpC BED33_11875 IPR035906 MetI-like superfamily BED33_11875 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED33_11880 IPR026045 Ferric binding protein BED33_11885 IPR011701 Major facilitator superfamily BED33_11885 IPR020846 Major facilitator superfamily domain BED33_11885 IPR036259 MFS transporter superfamily BED33_11885 IPR021159 Glycerate/sugar phosphate transporter, conserved site BED33_11885 IPR000849 Sugar phosphate transporter BED33_11890 IPR005467 Histidine kinase domain BED33_11890 IPR007895 MASE1 BED33_11890 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain BED33_11890 IPR003594 Histidine kinase/HSP90-like ATPase BED33_11890 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BED33_11895 IPR011006 CheY-like superfamily BED33_11895 IPR000792 Transcription regulator LuxR, C-terminal BED33_11895 IPR001789 Signal transduction response regulator, receiver domain BED33_11895 IPR016032 Signal transduction response regulator, C-terminal effector BED33_11900 IPR001789 Signal transduction response regulator, receiver domain BED33_11900 IPR024187 Signal transduction response regulator, citrate/malate metabolism BED33_11900 IPR011006 CheY-like superfamily BED33_11900 IPR028141 Transcriptional regulator BED33_11905 IPR033463 Single cache domain 3 BED33_11905 IPR029151 Periplasmic sensor-like domain superfamily BED33_11905 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BED33_11905 IPR039506 SpoOB, alpha-helical domain BED33_11905 IPR013767 PAS fold BED33_11905 IPR035965 PAS domain superfamily BED33_11905 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB BED33_11905 IPR000014 PAS domain BED33_11905 IPR003594 Histidine kinase/HSP90-like ATPase BED33_11905 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BED33_11905 IPR005467 Histidine kinase domain BED33_11920 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED33_11920 IPR000182 GNAT domain BED33_11920 IPR004821 Cytidyltransferase-like domain BED33_11920 IPR013166 Citrate lyase ligase, C-terminal BED33_11920 IPR005216 Citrate lyase ligase BED33_11920 IPR016181 Acyl-CoA N-acyltransferase BED33_11925 IPR006495 Citrate lyase acyl carrier protein CitD BED33_11925 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein BED33_11930 IPR040442 Pyruvate kinase-like domain superfamily BED33_11930 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily BED33_11930 IPR005000 HpcH/HpaI aldolase/citrate lyase domain BED33_11930 IPR006475 Citrate lyase, beta subunit, bacteria BED33_11930 IPR011206 Citrate lyase beta subunit-like BED33_11935 IPR006472 Citrate lyase, alpha subunit BED33_11935 IPR037171 NagB/RpiA transferase-like BED33_11940 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG BED33_11940 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase BED33_11940 IPR002736 Triphosphoribosyl-dephospho-CoA protein BED33_11945 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG BED33_11945 IPR002736 Triphosphoribosyl-dephospho-CoA protein BED33_11950 IPR001898 Solute carrier family 13 BED33_11950 IPR030676 Citrate carrier CitT-related BED33_11965 IPR004682 TRAP transporter solute receptor, DctP family BED33_11965 IPR038404 TRAP transporter solute receptor DctP superfamily BED33_11965 IPR018389 TRAP transporter solute receptor DctP/TeaA BED33_11975 IPR003542 Enterobactin synthetase-like, component D BED33_11975 IPR041354 4'-phosphopantetheinyl transferase, N-terminal domain BED33_11975 IPR037143 4'-phosphopantetheinyl transferase domain superfamily BED33_11975 IPR008278 4'-phosphopantetheinyl transferase domain BED33_11985 IPR005828 Major facilitator, sugar transporter-like BED33_11985 IPR005829 Sugar transporter, conserved site BED33_11985 IPR003663 Sugar/inositol transporter BED33_11985 IPR036259 MFS transporter superfamily BED33_11985 IPR020846 Major facilitator superfamily domain BED33_11990 IPR002114 Phosphotransferase system, HPr serine phosphorylation site BED33_11990 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site BED33_11990 IPR002178 PTS EIIA type-2 domain BED33_11990 IPR016152 Phosphotransferase/anion transporter BED33_11990 IPR035895 HPr-like superfamily BED33_11990 IPR000032 Phosphocarrier protein HPr-like BED33_11990 IPR016258 Multiphosphoryl transfer protein FruB BED33_11995 IPR018636 Protein of unknown function DUF2058 BED33_12000 IPR020103 Pseudouridine synthase, catalytic domain superfamily BED33_12000 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site BED33_12000 IPR006145 Pseudouridine synthase, RsuA/RluA BED33_12025 IPR025885 PapC, N-terminal domain BED33_12025 IPR000015 Outer membrane usher protein BED33_12025 IPR025949 PapC-like, C-terminal domain BED33_12025 IPR037224 PapC, N-terminal domain superfamily BED33_12025 IPR018030 Fimbrial membrane usher, conserved site BED33_12025 IPR042186 Outer membrane usher protein FimD, plug domain BED33_12030 IPR013783 Immunoglobulin-like fold BED33_12030 IPR016147 Pili assembly chaperone, N-terminal BED33_12030 IPR008962 PapD-like superfamily BED33_12030 IPR036316 Pili assembly chaperone, C-terminal domain superfamily BED33_12030 IPR001829 Pili assembly chaperone, bacterial BED33_12030 IPR016148 Pili assembly chaperone, C-terminal BED33_12030 IPR018046 Pili assembly chaperone, conserved site BED33_12045 IPR001789 Signal transduction response regulator, receiver domain BED33_12045 IPR016032 Signal transduction response regulator, C-terminal effector BED33_12045 IPR000792 Transcription regulator LuxR, C-terminal BED33_12045 IPR011006 CheY-like superfamily BED33_12055 IPR042252 MtfA, N-terminal BED33_12055 IPR024079 Metallopeptidase, catalytic domain superfamily BED33_12055 IPR010384 MtfA family BED33_12065 IPR018485 Carbohydrate kinase, FGGY, C-terminal BED33_12065 IPR000577 Carbohydrate kinase, FGGY BED33_12065 IPR018484 Carbohydrate kinase, FGGY, N-terminal BED33_12065 IPR018483 Carbohydrate kinase, FGGY, conserved site BED33_12090 IPR013783 Immunoglobulin-like fold BED33_12090 IPR036316 Pili assembly chaperone, C-terminal domain superfamily BED33_12090 IPR008962 PapD-like superfamily BED33_12090 IPR016147 Pili assembly chaperone, N-terminal BED33_12095 IPR003346 Transposase, IS116/IS110/IS902 BED33_12095 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED33_12100 IPR005836 ADP-glucose pyrophosphorylase, conserved site BED33_12100 IPR011831 Glucose-1-phosphate adenylyltransferase BED33_12100 IPR029044 Nucleotide-diphospho-sugar transferases BED33_12100 IPR011004 Trimeric LpxA-like superfamily BED33_12100 IPR005835 Nucleotidyl transferase domain BED33_12100 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial BED33_12110 IPR017704 Putative selenium-binding protein YdfZ BED33_12125 IPR019713 Inner membrane protein YlaC BED33_12130 IPR036736 ACP-like superfamily BED33_12130 IPR013149 Alcohol dehydrogenase, C-terminal BED33_12130 IPR013154 Alcohol dehydrogenase, N-terminal BED33_12130 IPR011032 GroES-like superfamily BED33_12130 IPR014043 Acyl transferase BED33_12130 IPR018201 Beta-ketoacyl synthase, active site BED33_12130 IPR014031 Beta-ketoacyl synthase, C-terminal BED33_12130 IPR009081 Phosphopantetheine binding ACP domain BED33_12130 IPR020806 Polyketide synthase, phosphopantetheine-binding domain BED33_12130 IPR013968 Polyketide synthase, ketoreductase domain BED33_12130 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase BED33_12130 IPR036291 NAD(P)-binding domain superfamily BED33_12130 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding BED33_12130 IPR014030 Beta-ketoacyl synthase, N-terminal BED33_12130 IPR016039 Thiolase-like BED33_12130 IPR032821 Ketoacyl-synthetase, C-terminal extension BED33_12130 IPR020843 Polyketide synthase, enoylreductase domain BED33_12130 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BED33_12130 IPR020807 Polyketide synthase, dehydratase domain BED33_12130 IPR042104 Polyketide synthase, dehydratase domain superfamily BED33_12130 IPR001227 Acyl transferase domain superfamily BED33_12135 IPR001207 Transposase, mutator type BED33_12140 IPR023230 Glycoside hydrolase, family 2, conserved site BED33_12140 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich BED33_12140 IPR006104 Glycosyl hydrolases family 2, sugar binding domain BED33_12140 IPR017853 Glycoside hydrolase superfamily BED33_12140 IPR006103 Glycoside hydrolase family 2, catalytic domain BED33_12140 IPR032312 Beta-galactosidase, domain 4 BED33_12140 IPR013783 Immunoglobulin-like fold BED33_12140 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase BED33_12140 IPR023232 Glycoside hydrolase, family 2, active site BED33_12140 IPR006101 Glycoside hydrolase, family 2 BED33_12140 IPR014718 Glycoside hydrolase-type carbohydrate-binding BED33_12140 IPR008979 Galactose-binding-like domain superfamily BED33_12140 IPR011013 Galactose mutarotase-like domain superfamily BED33_12140 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily BED33_12140 IPR004199 Beta galactosidase small chain/ domain 5 BED33_12145 IPR028082 Periplasmic binding protein-like I BED33_12145 IPR000843 LacI-type HTH domain BED33_12145 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BED33_12150 IPR012340 Nucleic acid-binding, OB-fold BED33_12150 IPR019844 Cold-shock (CSD) domain BED33_12150 IPR011129 Cold shock domain BED33_12150 IPR002059 Cold-shock protein, DNA-binding BED33_12150 IPR012156 Cold shock, CspA BED33_12155 IPR019717 Dextransucrase DSRB BED33_12160 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily BED33_12160 IPR004090 Chemotaxis methyl-accepting receptor BED33_12160 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site BED33_12160 IPR003660 HAMP domain BED33_12160 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BED33_12160 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding BED33_12175 IPR003416 MgtC/SapB/SrpB/YhiD family BED33_12180 IPR023298 P-type ATPase, transmembrane domain superfamily BED33_12180 IPR001757 P-type ATPase BED33_12180 IPR006415 P-type ATPase, subfamily IIIB BED33_12180 IPR023214 HAD superfamily BED33_12180 IPR036412 HAD-like superfamily BED33_12180 IPR008250 P-type ATPase, A domain superfamily BED33_12180 IPR006068 Cation-transporting P-type ATPase, C-terminal BED33_12180 IPR018303 P-type ATPase, phosphorylation site BED33_12180 IPR023299 P-type ATPase, cytoplasmic domain N BED33_12180 IPR004014 Cation-transporting P-type ATPase, N-terminal BED33_12185 IPR020843 Polyketide synthase, enoylreductase domain BED33_12185 IPR013149 Alcohol dehydrogenase, C-terminal BED33_12185 IPR011032 GroES-like superfamily BED33_12185 IPR036291 NAD(P)-binding domain superfamily BED33_12185 IPR041694 Oxidoreductase, N-terminal domain BED33_12190 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED33_12190 IPR006015 Universal stress protein A family BED33_12190 IPR006016 UspA BED33_12195 IPR036194 Flagellar transcriptional activator FlhD superfamily BED33_12195 IPR023559 Flagellar transcriptional activator FlhD BED33_12200 IPR007944 Flagellar transcriptional activator FlhC BED33_12205 IPR022522 Flagellar motor stator, MotA BED33_12205 IPR000540 Flagellar motor protein MotA, conserved site BED33_12205 IPR002898 MotA/TolQ/ExbB proton channel BED33_12210 IPR006665 OmpA-like domain BED33_12210 IPR025713 Motility protein B, N-terminal domain BED33_12210 IPR036737 OmpA-like domain superfamily BED33_12215 IPR004105 Histidine kinase CheA-like, homodimeric domain BED33_12215 IPR035891 CheY-binding domain of CheA BED33_12215 IPR036641 HPT domain superfamily BED33_12215 IPR036061 CheW-like domain superfamily BED33_12215 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily BED33_12215 IPR003594 Histidine kinase/HSP90-like ATPase BED33_12215 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BED33_12215 IPR005467 Histidine kinase domain BED33_12215 IPR015162 CheY binding BED33_12215 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BED33_12215 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain BED33_12215 IPR002545 CheW-like domain BED33_12215 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BED33_12220 IPR002545 CheW-like domain BED33_12220 IPR036061 CheW-like domain superfamily BED33_12220 IPR039315 Chemotaxis protein CheW BED33_12225 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BED33_12225 IPR003660 HAMP domain BED33_12225 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site BED33_12225 IPR004090 Chemotaxis methyl-accepting receptor BED33_12225 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily BED33_12225 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding BED33_12230 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site BED33_12230 IPR003660 HAMP domain BED33_12230 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BED33_12230 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding BED33_12230 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily BED33_12230 IPR004090 Chemotaxis methyl-accepting receptor BED33_12235 IPR026024 Chemotaxis protein methyltransferase CheR BED33_12235 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal BED33_12235 IPR000780 MCP methyltransferase, CheR-type BED33_12235 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal BED33_12235 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily BED33_12235 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED33_12240 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase BED33_12240 IPR011006 CheY-like superfamily BED33_12240 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type BED33_12240 IPR035909 Methylesterase CheB, C-terminal BED33_12240 IPR001789 Signal transduction response regulator, receiver domain BED33_12245 IPR011006 CheY-like superfamily BED33_12245 IPR001789 Signal transduction response regulator, receiver domain BED33_12250 IPR007439 Chemotaxis phosphatase, CheZ BED33_12260 IPR029025 Type III secretion system substrate exporter, C-terminal BED33_12260 IPR006135 Type III secretion system substrate exporter BED33_12260 IPR006136 Flagellar biosynthetic protein FlhB BED33_12265 IPR006301 Flagellar biosynthesis protein FlhA BED33_12265 IPR025505 FHIPEP conserved site BED33_12265 IPR001712 Type III secretion system FHIPEP BED33_12265 IPR042196 FHIPEP, domain 4 BED33_12265 IPR042194 FHIPEP, domain 1 BED33_12265 IPR042193 FHIPEP, domain 3 BED33_12270 IPR009420 Flagellar protein FlhE BED33_12280 IPR036679 FlgN-like superfamily BED33_12280 IPR007809 FlgN-like protein BED33_12285 IPR035890 Anti-sigma-28 factor FlgM superfamily BED33_12285 IPR031316 Anti-sigma-28 factor FlgM, C-terminal BED33_12285 IPR007412 Anti-sigma-28 factor, FlgM BED33_12290 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal BED33_12290 IPR013974 SAF domain BED33_12290 IPR039246 Flagellar protein FlgA BED33_12290 IPR041231 FlgA, N-terminal BED33_12295 IPR001444 Flagellar basal body rod protein, N-terminal BED33_12295 IPR006300 Flagellar basal-body rod protein FlgB BED33_12295 IPR019776 Flagellar basal body rod protein, conserved site BED33_12300 IPR006299 Flagellar basal-body rod protein FlgC BED33_12300 IPR019776 Flagellar basal body rod protein, conserved site BED33_12300 IPR001444 Flagellar basal body rod protein, N-terminal BED33_12300 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BED33_12305 IPR005648 Flagellar hook capping protein BED33_12305 IPR025965 FlgD Ig-like domain BED33_12305 IPR025963 FlgD Tudor-like domain BED33_12310 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like BED33_12310 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BED33_12310 IPR019776 Flagellar basal body rod protein, conserved site BED33_12310 IPR001444 Flagellar basal body rod protein, N-terminal BED33_12310 IPR020013 Flagellar hook-basal body protein, FlgE/F/G BED33_12310 IPR037058 Flagellar hook protein FlgE superfamily BED33_12310 IPR011491 Flagellar hook protein FlgE BED33_12315 IPR001444 Flagellar basal body rod protein, N-terminal BED33_12315 IPR020013 Flagellar hook-basal body protein, FlgE/F/G BED33_12315 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BED33_12315 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like BED33_12315 IPR019776 Flagellar basal body rod protein, conserved site BED33_12320 IPR012834 Flagellar basal-body rod FlgG BED33_12320 IPR019776 Flagellar basal body rod protein, conserved site BED33_12320 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like BED33_12320 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BED33_12320 IPR020013 Flagellar hook-basal body protein, FlgE/F/G BED33_12320 IPR001444 Flagellar basal body rod protein, N-terminal BED33_12325 IPR000527 Flagellar L-ring protein BED33_12330 IPR001782 Flagellar P-ring protein BED33_12335 IPR013377 Peptidoglycan hydrolase FlgJ BED33_12335 IPR019301 Flagellar protein FlgJ, N-terminal BED33_12335 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain BED33_12340 IPR001444 Flagellar basal body rod protein, N-terminal BED33_12340 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BED33_12340 IPR002371 Flagellar hook-associated protein 1 BED33_12345 IPR001029 Flagellin, D0/D1 domain BED33_12345 IPR013384 Flagellar hook-associated protein 3 BED33_12350 IPR002010 Type III secretion system inner membrane R protein BED33_12350 IPR006303 Flagellar biosynthesis protein FliR BED33_12355 IPR002191 Bacterial export protein family 3 BED33_12355 IPR006305 Flagellar biosynthesis protein FliQ BED33_12360 IPR005838 Type III secretion system inner membrane P protein BED33_12360 IPR005837 Flagellar transport protein FliP BED33_12365 IPR022781 Flagellar biosynthesis protein, FliO BED33_12370 IPR012826 Flagellar motor switch FliN BED33_12370 IPR031576 Flagellar motor switch protein FliN, N-terminal BED33_12370 IPR036429 SpoA-like superfamily BED33_12370 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb BED33_12370 IPR001543 Surface presentation of antigen (SpoA) BED33_12375 IPR036429 SpoA-like superfamily BED33_12375 IPR001543 Surface presentation of antigen (SpoA) BED33_12375 IPR001689 Flagellar motor switch protein FliM BED33_12375 IPR028976 CheC-like superfamily BED33_12380 IPR005503 Flagellar basal body-associated protein FliL BED33_12385 IPR038610 FliK-like, C-terminal domain superfamily BED33_12385 IPR001635 Flagellar hook-length control protein FliK BED33_12385 IPR021136 Flagellar hook-length control protein-like, C-terminal BED33_12390 IPR012823 Flagellar export FliJ BED33_12390 IPR018006 Flagellar FliJ, proteobacteria BED33_12395 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_12395 IPR040627 T3SS EscN ATPase, C-terminal BED33_12395 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site BED33_12395 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain BED33_12395 IPR032463 ATPase, type III secretion system, FliI BED33_12395 IPR005714 ATPase, type III secretion system, FliI/YscN BED33_12395 IPR020005 Flagellar export ATPase FliI, clade 1 BED33_12395 IPR003593 AAA+ ATPase domain BED33_12400 IPR000563 Flagellar assembly protein FliH BED33_12400 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE BED33_12405 IPR028263 Flagellar motor switch protein FliG, N-terminal domain BED33_12405 IPR032779 Flagellar motor switch protein FliG, middle domain BED33_12405 IPR000090 Flagellar motor switch protein FliG BED33_12405 IPR023087 Flagellar motor switch protein FliG, C-terminal BED33_12405 IPR011002 Flagellar motor switch protein FliG, alpha-helical BED33_12410 IPR000067 Flagellar M-ring protein FliF BED33_12410 IPR006182 Secretory protein YscJ/FliF BED33_12410 IPR013556 Flagellar M-ring C-terminal BED33_12415 IPR001624 Flagellar hook-basal body complex protein FliE BED33_12420 IPR013762 Integrase-like, catalytic domain superfamily BED33_12420 IPR011010 DNA breaking-rejoining enzyme, catalytic core BED33_12420 IPR002104 Integrase, catalytic domain BED33_12420 IPR022000 Min27-like integrase, DNA-binding domain BED33_12420 IPR010998 Integrase/recombinase, N-terminal BED33_12440 IPR003265 HhH-GPD domain BED33_12440 IPR011257 DNA glycosylase BED33_12445 IPR003607 HD/PDEase domain BED33_12445 IPR037522 HD-GYP domain BED33_12445 IPR006675 HDIG domain BED33_12445 IPR006674 HD domain BED33_12450 IPR018062 HTH domain AraC-type, conserved site BED33_12450 IPR018060 DNA binding HTH domain, AraC-type BED33_12450 IPR009057 Homeobox-like domain superfamily BED33_12450 IPR020449 Transcription regulator HTH, AraC- type BED33_12455 IPR008622 Flagellar protein FliT BED33_12460 IPR003713 Flagellar protein FliS BED33_12460 IPR036584 Flagellar protein FliS superfamily BED33_12465 IPR010810 Flagellin hook, IN motif BED33_12465 IPR040026 Flagellar hook-associated protein 2 BED33_12465 IPR003481 Flagellar hook-associated protein 2, N-terminal BED33_12465 IPR010809 Flagellar hook-associated protein 2, C-terminal BED33_12470 IPR001492 Flagellin BED33_12470 IPR001029 Flagellin, D0/D1 domain BED33_12470 IPR014981 Flagellin D3 BED33_12475 IPR001029 Flagellin, D0/D1 domain BED33_12475 IPR014981 Flagellin D3 BED33_12475 IPR001492 Flagellin BED33_12485 IPR013324 RNA polymerase sigma factor, region 3/4-like BED33_12485 IPR000943 RNA polymerase sigma-70 BED33_12485 IPR007627 RNA polymerase sigma-70 region 2 BED33_12485 IPR007624 RNA polymerase sigma-70 region 3 BED33_12485 IPR007630 RNA polymerase sigma-70 region 4 BED33_12485 IPR012845 RNA polymerase sigma factor, FliA/WhiG BED33_12485 IPR028617 RNA polymerase sigma factor FliA BED33_12485 IPR014284 RNA polymerase sigma-70 like domain BED33_12485 IPR013325 RNA polymerase sigma factor, region 2 BED33_12490 IPR004107 Integrase, SAM-like, N-terminal BED33_12490 IPR022523 Flagellar regulator, FliZ BED33_12495 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BED33_12495 IPR023702 D-cysteine desulphhydrase, bacterial BED33_12495 IPR005966 D-cysteine desulfhydrase BED33_12495 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase BED33_12495 IPR001926 Pyridoxal-phosphate dependent enzyme BED33_12525 IPR041349 Proline utilization A proline dehydrogenase N-terminal domain BED33_12525 IPR002872 Proline dehydrogenase domain BED33_12525 IPR024082 Proline dehydrogenase PutA, domain II BED33_12525 IPR024089 Proline dehydrogenase PutA, domain I/II BED33_12525 IPR024090 Proline dehydrogenase PutA, domain I BED33_12525 IPR029041 FAD-linked oxidoreductase-like BED33_12525 IPR010985 Ribbon-helix-helix BED33_12525 IPR025703 Bifunctional protein PutA BED33_12525 IPR013321 Arc-type ribbon-helix-helix BED33_12525 IPR015590 Aldehyde dehydrogenase domain BED33_12525 IPR016162 Aldehyde dehydrogenase, N-terminal BED33_12525 IPR029510 Aldehyde dehydrogenase, glutamic acid active site BED33_12525 IPR016160 Aldehyde dehydrogenase, cysteine active site BED33_12525 IPR016163 Aldehyde dehydrogenase, C-terminal BED33_12525 IPR016161 Aldehyde/histidinol dehydrogenase BED33_12525 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 BED33_12530 IPR001734 Sodium/solute symporter BED33_12530 IPR038377 Sodium/glucose symporter superfamily BED33_12530 IPR018212 Sodium/solute symporter, conserved site BED33_12530 IPR011851 Sodium/proline symporter BED33_12550 IPR004923 Iron permease FTR1/Fip1/EfeU BED33_12555 IPR034981 EfeO/Algp7, imelysin-like domain BED33_12555 IPR018976 Imelysin-like domain BED33_12555 IPR038352 Imelysin-like domain superfamily BED33_12555 IPR028096 EfeO-type cupredoxin-like domain BED33_12555 IPR008972 Cupredoxin BED33_12560 IPR011008 Dimeric alpha-beta barrel BED33_12560 IPR006313 Deferrochelatase/peroxidase EfeB BED33_12560 IPR006311 Twin-arginine translocation pathway, signal sequence BED33_12560 IPR006314 Dyp-type peroxidase BED33_12565 IPR037513 NAD(P)H dehydrogenase (quinone), prokaryotic BED33_12565 IPR005025 NADPH-dependent FMN reductase-like BED33_12565 IPR010089 Flavoprotein WrbA-like BED33_12565 IPR029039 Flavoprotein-like superfamily BED33_12565 IPR008254 Flavodoxin/nitric oxide synthase BED33_12575 IPR015915 Kelch-type beta propeller BED33_12575 IPR006652 Kelch repeat type 1 BED33_12575 IPR019936 Mutatrotase, YjhT-like BED33_12590 IPR012349 FMN-binding split barrel BED33_12590 IPR019917 FMN reductase (NADH) RutF BED33_12590 IPR002563 Flavin reductase like domain BED33_12595 IPR023936 NADH dehydrogenase/NAD(P)H nitroreductase, putative, RutE BED33_12595 IPR000415 Nitroreductase-like BED33_12595 IPR029479 Nitroreductase BED33_12600 IPR019913 Pyrimidine utilisation protein RutD BED33_12600 IPR000073 Alpha/beta hydrolase fold-1 BED33_12600 IPR029058 Alpha/Beta hydrolase fold BED33_12605 IPR006175 YjgF/YER057c/UK114 family BED33_12605 IPR019898 Putative aminoacrylate peracid reductase RutC BED33_12605 IPR035959 RutC-like superfamily BED33_12605 IPR019897 RidA, conserved site BED33_12610 IPR000868 Isochorismatase-like BED33_12610 IPR019916 Isochorismatase, RutB BED33_12610 IPR036380 Isochorismatase-like superfamily BED33_12620 IPR013573 Transcription regulator YcdC, C-terminal BED33_12620 IPR019915 Transcription regulator, pyrimidine utilisation, RutR BED33_12620 IPR001647 DNA-binding HTH domain, TetR-type BED33_12620 IPR009057 Homeobox-like domain superfamily BED33_12620 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BED33_12625 IPR004840 Amino acid permease, conserved site BED33_12625 IPR004841 Amino acid permease/ SLC12A domain BED33_12635 IPR002104 Integrase, catalytic domain BED33_12635 IPR013762 Integrase-like, catalytic domain superfamily BED33_12635 IPR010998 Integrase/recombinase, N-terminal BED33_12635 IPR011010 DNA breaking-rejoining enzyme, catalytic core BED33_12640 IPR002514 Transposase IS3/IS911family BED33_12640 IPR009057 Homeobox-like domain superfamily BED33_12665 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta BED33_12665 IPR013776 Alpha-amylase, thermostable BED33_12665 IPR013780 Glycosyl hydrolase, all-beta BED33_12665 IPR006047 Glycosyl hydrolase, family 13, catalytic domain BED33_12665 IPR017853 Glycoside hydrolase superfamily BED33_12675 IPR009707 Membrane protein GlpM/YdgC BED33_12690 IPR004791 UvrABC system, subunit C BED33_12690 IPR038476 UvrC homology region 2 superfamily BED33_12690 IPR036876 UVR domain superfamily BED33_12690 IPR001943 UVR domain BED33_12690 IPR010994 RuvA domain 2-like BED33_12690 IPR000305 GIY-YIG endonuclease BED33_12690 IPR001162 UvrC family homology region BED33_12690 IPR035901 GIY-YIG endonuclease superfamily BED33_12695 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial BED33_12695 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase BED33_12695 IPR000462 CDP-alcohol phosphatidyltransferase BED33_12715 IPR007684 Zinc finger, Ogr/Delta-type BED33_12790 IPR005119 LysR, substrate-binding BED33_12790 IPR000847 Transcription regulator HTH, LysR BED33_12790 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_12790 IPR036390 Winged helix DNA-binding domain superfamily BED33_12800 IPR018357 Hexapeptide transferase, conserved site BED33_12800 IPR001451 Hexapeptide repeat BED33_12800 IPR011004 Trimeric LpxA-like superfamily BED33_12810 IPR010534 Bacteriophage 933W, GpQ BED33_12815 IPR019689 Toxin GhoT/OrtT BED33_12825 IPR023346 Lysozyme-like domain superfamily BED33_12825 IPR002196 Glycoside hydrolase, family 24 BED33_12825 IPR034690 Endolysin T4 type BED33_12830 IPR029058 Alpha/Beta hydrolase fold BED33_12830 IPR000073 Alpha/beta hydrolase fold-1 BED33_12835 IPR029024 TerB-like BED33_12835 IPR007486 Inner membrane protein YebE BED33_12840 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_12840 IPR036390 Winged helix DNA-binding domain superfamily BED33_12840 IPR005119 LysR, substrate-binding BED33_12840 IPR000847 Transcription regulator HTH, LysR BED33_12845 IPR001586 Beta-lactamase, class-C active site BED33_12845 IPR012338 Beta-lactamase/transpeptidase-like BED33_12845 IPR001466 Beta-lactamase-related BED33_12850 IPR012676 TGS-like BED33_12850 IPR006073 GTP binding domain BED33_12850 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_12850 IPR023192 TGS-like domain superfamily BED33_12850 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 BED33_12850 IPR012675 Beta-grasp domain superfamily BED33_12850 IPR031167 OBG-type guanine nucleotide-binding (G) domain BED33_12850 IPR013029 YchF, C-terminal domain BED33_12850 IPR041706 YchF, N-terminal BED33_12850 IPR004095 TGS BED33_12860 IPR036416 Peptidyl-tRNA hydrolase superfamily BED33_12860 IPR018171 Peptidyl-tRNA hydrolase, conserved site BED33_12860 IPR001328 Peptidyl-tRNA hydrolase BED33_12865 IPR019698 Protein of unknown function DUF2583 BED33_12875 IPR000836 Phosphoribosyltransferase domain BED33_12875 IPR029057 Phosphoribosyltransferase-like BED33_12875 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site BED33_12875 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain BED33_12875 IPR005946 Ribose-phosphate pyrophosphokinase BED33_12875 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type BED33_12880 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BED33_12880 IPR020568 Ribosomal protein S5 domain 2-type fold BED33_12880 IPR036554 GHMP kinase, C-terminal domain superfamily BED33_12880 IPR013750 GHMP kinase, C-terminal domain BED33_12880 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase BED33_12880 IPR006204 GHMP kinase N-terminal domain BED33_12885 IPR004565 Outer membrane lipoprotein LolB BED33_12885 IPR029046 Lipoprotein localisation LolA/LolB/LppX BED33_12890 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase BED33_12890 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain BED33_12890 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal BED33_12890 IPR036291 NAD(P)-binding domain superfamily BED33_12890 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase BED33_12890 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily BED33_12890 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily BED33_12890 IPR018214 Glutamyl-tRNA reductase, conserved site BED33_12895 IPR000352 Peptide chain release factor class I BED33_12895 IPR004373 Peptide chain release factor 1 BED33_12895 IPR005139 Peptide chain release factor BED33_12900 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific BED33_12900 IPR040758 Release factor glutamine methyltransferase, N-terminal domain BED33_12900 IPR002052 DNA methylase, N-6 adenine-specific, conserved site BED33_12900 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED33_12900 IPR004556 Methyltransferase HemK-like BED33_12900 IPR025714 Methyltransferase domain BED33_12905 IPR007360 Invasion gene expression up-regulator, SirB BED33_12910 IPR032698 Protein SirB1, N-terminal BED33_12915 IPR006218 DAHP synthetase I/KDSA BED33_12915 IPR006269 3-deoxy-8-phosphooctulonate synthase BED33_12915 IPR013785 Aldolase-type TIM barrel BED33_12920 IPR002645 STAS domain BED33_12920 IPR001902 SLC26A/SulP transporter BED33_12920 IPR011547 SLC26A/SulP transporter domain BED33_12920 IPR036513 STAS domain superfamily BED33_12920 IPR018045 Sulphate anion transporter, conserved site BED33_12925 IPR009050 Globin-like superfamily BED33_12925 IPR012292 Globin/Protoglobin BED33_12925 IPR039435 Diguanylate cyclase DosC, globin sensor domain BED33_12925 IPR000160 GGDEF domain BED33_12925 IPR029787 Nucleotide cyclase BED33_12945 IPR023514 Glyoxylate/hydroxypyruvate reductase A BED33_12945 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain BED33_12945 IPR036291 NAD(P)-binding domain superfamily BED33_12950 IPR004013 PHP domain BED33_12950 IPR023710 Probable phosphatase YcdX BED33_12950 IPR003141 Polymerase/histidinol phosphatase, N-terminal BED33_12950 IPR016195 Polymerase/histidinol phosphatase-like BED33_12955 IPR026269 Tat proofreading chaperone DmsD-type BED33_12955 IPR020945 DMSO/Nitrate reductase chaperone BED33_12955 IPR036411 TorD-like superfamily BED33_12960 IPR010835 Protein of unknown function DUF1439 BED33_12965 IPR011701 Major facilitator superfamily BED33_12965 IPR020846 Major facilitator superfamily domain BED33_12965 IPR036259 MFS transporter superfamily BED33_12965 IPR022855 Multidrug resistance protein MdtH BED33_12980 IPR000182 GNAT domain BED33_12980 IPR016181 Acyl-CoA N-acyltransferase BED33_12985 IPR007432 Protein of unknown function DUF480 BED33_12985 IPR036390 Winged helix DNA-binding domain superfamily BED33_12985 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_12990 IPR036291 NAD(P)-binding domain superfamily BED33_12990 IPR000683 Oxidoreductase, N-terminal BED33_12995 IPR004268 Peptidoglycan biosynthesis protein MurJ BED33_13000 IPR004837 Sodium/calcium exchanger membrane region BED33_13000 IPR004713 Calcium/proton exchanger BED33_13010 IPR036259 MFS transporter superfamily BED33_13010 IPR020846 Major facilitator superfamily domain BED33_13010 IPR011701 Major facilitator superfamily BED33_13015 IPR003346 Transposase, IS116/IS110/IS902 BED33_13015 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED33_13025 IPR003660 HAMP domain BED33_13025 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BED33_13025 IPR003594 Histidine kinase/HSP90-like ATPase BED33_13025 IPR042295 NarX-like, N-terminal domain superfamily BED33_13025 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing BED33_13025 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain BED33_13025 IPR005467 Histidine kinase domain BED33_13025 IPR029095 NarX-like, N-terminal BED33_13030 IPR003317 Cytochrome ubiquinol oxidase subunit 2 BED33_13035 IPR002585 Cytochrome ubiquinol oxidase subunit 1 BED33_13040 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED33_13040 IPR000524 Transcription regulator HTH, GntR BED33_13040 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED33_13040 IPR015424 Pyridoxal phosphate-dependent transferase BED33_13040 IPR036390 Winged helix DNA-binding domain superfamily BED33_13040 IPR004839 Aminotransferase, class I/classII BED33_13040 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_13045 IPR005814 Aminotransferase class-III BED33_13045 IPR004636 Acetylornithine/Succinylornithine transaminase family BED33_13045 IPR015424 Pyridoxal phosphate-dependent transferase BED33_13045 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED33_13045 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria BED33_13045 IPR026330 Succinylornithine transaminase BED33_13045 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED33_13050 IPR017650 Arginine N-succinyltransferase BED33_13050 IPR007041 Arginine N-succinyltransferase AstA/AruG BED33_13050 IPR016181 Acyl-CoA N-acyltransferase BED33_13055 IPR016162 Aldehyde dehydrogenase, N-terminal BED33_13055 IPR016160 Aldehyde dehydrogenase, cysteine active site BED33_13055 IPR015590 Aldehyde dehydrogenase domain BED33_13055 IPR016163 Aldehyde dehydrogenase, C-terminal BED33_13055 IPR016161 Aldehyde/histidinol dehydrogenase BED33_13055 IPR029510 Aldehyde dehydrogenase, glutamic acid active site BED33_13055 IPR017649 Succinylglutamate-semialdehyde dehydrogenase BED33_13060 IPR037031 Succinylarginine dihydrolase superfamily BED33_13060 IPR007079 Succinylarginine dihydrolase BED33_13065 IPR007036 Succinylglutamate desuccinylase/aspartoacylase BED33_13065 IPR016681 Succinylglutamate desuccinylase BED33_13070 IPR003346 Transposase, IS116/IS110/IS902 BED33_13070 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED33_13075 IPR023614 Porin domain superfamily BED33_13075 IPR013793 Porin, Gram-negative type, conserved site BED33_13075 IPR001897 Porin, gammaproteobacterial BED33_13075 IPR001702 Porin, Gram-negative type BED33_13075 IPR033900 Porin domain, Gram-negative type BED33_13080 IPR025948 HTH-like domain BED33_13080 IPR036397 Ribonuclease H superfamily BED33_13080 IPR001584 Integrase, catalytic core BED33_13080 IPR012337 Ribonuclease H-like superfamily BED33_13095 IPR011059 Metal-dependent hydrolase, composite domain superfamily BED33_13095 IPR005920 Imidazolonepropionase BED33_13095 IPR032466 Metal-dependent hydrolase BED33_13095 IPR006680 Amidohydrolase-related BED33_13100 IPR036390 Winged helix DNA-binding domain superfamily BED33_13100 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_13100 IPR011663 UbiC transcription regulator-associated BED33_13100 IPR000524 Transcription regulator HTH, GntR BED33_13100 IPR010248 Histidine utilization repressor BED33_13100 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily BED33_13105 IPR032466 Metal-dependent hydrolase BED33_13105 IPR006680 Amidohydrolase-related BED33_13105 IPR011059 Metal-dependent hydrolase, composite domain superfamily BED33_13105 IPR023512 Deaminase MtaD/DadD BED33_13135 IPR036779 LysM domain superfamily BED33_13135 IPR018392 LysM domain BED33_13135 IPR016047 Peptidase M23 BED33_13135 IPR011055 Duplicated hybrid motif BED33_13140 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY BED33_13140 IPR013785 Aldolase-type TIM barrel BED33_13140 IPR000771 Fructose-bisphosphate aldolase, class-II BED33_13140 IPR023788 D-tagatose-bisphosphate aldolase, class II, subunit KbaY BED33_13145 IPR035466 GlmS/AgaS, SIS domain 1 BED33_13145 IPR001347 Sugar isomerase (SIS) BED33_13145 IPR014180 Sugar isomerase, AgaS BED33_13145 IPR035464 AgaS, SIS domain BED33_13150 IPR004701 Phosphotransferase system, mannose-type IIA component BED33_13150 IPR033887 PTS system mannose/sorbose specific IIA subunit BED33_13150 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily BED33_13155 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component BED33_13165 IPR004720 Phosphotransferase system, sorbose subfamily IIB component BED33_13165 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily BED33_13165 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup BED33_13170 IPR023435 D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit KbaZ BED33_13170 IPR013785 Aldolase-type TIM barrel BED33_13170 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ-like BED33_13175 IPR014036 DeoR C-terminal sensor domain BED33_13175 IPR001034 DeoR-type HTH domain BED33_13175 IPR037171 NagB/RpiA transferase-like BED33_13175 IPR018356 Transcription regulator, HTH DeoR-type, conserved site BED33_13175 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_13175 IPR036390 Winged helix DNA-binding domain superfamily BED33_13185 IPR003346 Transposase, IS116/IS110/IS902 BED33_13185 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED33_13195 IPR036986 RNA-binding S4 domain superfamily BED33_13195 IPR020103 Pseudouridine synthase, catalytic domain superfamily BED33_13195 IPR002942 RNA-binding S4 domain BED33_13195 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain BED33_13195 IPR006145 Pseudouridine synthase, RsuA/RluA BED33_13195 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site BED33_13195 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F BED33_13200 IPR004445 Sodium/glutamate symport carrier protein GltS BED33_13210 IPR003346 Transposase, IS116/IS110/IS902 BED33_13210 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED33_13215 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED33_13215 IPR003346 Transposase, IS116/IS110/IS902 BED33_13220 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED33_13220 IPR027555 tRNA (mo5U34)-methyltransferase-like BED33_13220 IPR010017 tRNA U34 carboxymethyltransferase BED33_13225 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED33_13225 IPR041698 Methyltransferase domain 25 BED33_13225 IPR005271 Carboxy-S-adenosyl-L-methionine synthase BED33_13230 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily BED33_13230 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein BED33_13235 IPR002763 Protein of unknown function DUF72 BED33_13235 IPR036520 UPF0759 superfamily BED33_13240 IPR036380 Isochorismatase-like superfamily BED33_13240 IPR000868 Isochorismatase-like BED33_13245 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb BED33_13245 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type BED33_13245 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) BED33_13245 IPR012340 Nucleic acid-binding, OB-fold BED33_13245 IPR004115 GAD-like domain superfamily BED33_13245 IPR004524 Aspartate-tRNA ligase, type 1 BED33_13245 IPR006195 Aminoacyl-tRNA synthetase, class II BED33_13245 IPR029351 GAD domain BED33_13250 IPR015797 NUDIX hydrolase-like domain superfamily BED33_13250 IPR003564 Dihydroneopterin triphosphate diphosphatase BED33_13250 IPR000086 NUDIX hydrolase domain BED33_13250 IPR020084 NUDIX hydrolase, conserved site BED33_13255 IPR026564 Transcriptional regulator TACO1-like, domain 3 BED33_13255 IPR002876 Transcriptional regulator TACO1-like BED33_13255 IPR029072 YebC-like BED33_13255 IPR017856 Integrase-like, N-terminal BED33_13260 IPR012337 Ribonuclease H-like superfamily BED33_13260 IPR002176 Crossover junction endodeoxyribonuclease RuvC BED33_13260 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site BED33_13260 IPR036397 Ribonuclease H superfamily BED33_13265 IPR000085 Bacterial DNA recombination protein RuvA BED33_13265 IPR010994 RuvA domain 2-like BED33_13265 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial BED33_13265 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 BED33_13265 IPR011114 Holliday junction DNA helicase RuvA, C-terminal BED33_13265 IPR012340 Nucleic acid-binding, OB-fold BED33_13265 IPR036267 RuvA, C-terminal domain superfamily BED33_13270 IPR003593 AAA+ ATPase domain BED33_13270 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_13270 IPR008824 RuvB-like P-loop domain BED33_13270 IPR008823 RuvB C-terminal winged helix domain BED33_13270 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_13270 IPR041445 RuvB, AAA lid domain BED33_13270 IPR004605 DNA helicase, Holliday junction RuvB-type BED33_13270 IPR036390 Winged helix DNA-binding domain superfamily BED33_13275 IPR005279 Dipeptide/tripeptide permease BED33_13275 IPR023778 Amino acid/peptide transporter family, dipeptide/tripeptide permease B BED33_13275 IPR000109 Proton-dependent oligopeptide transporter family BED33_13275 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site BED33_13275 IPR036259 MFS transporter superfamily BED33_13280 IPR001626 ABC transporter, TroCD-like BED33_13280 IPR037294 ABC transporter, BtuC-like BED33_13285 IPR017882 Zinc import ATP-binding protein ZnuC BED33_13285 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_13285 IPR003439 ABC transporter-like BED33_13285 IPR003593 AAA+ ATPase domain BED33_13290 IPR035520 High-affinity zinc uptake system protein ZnuA BED33_13290 IPR006127 Periplasmic solute binding protein, ZnuA-like BED33_13295 IPR018392 LysM domain BED33_13295 IPR013731 Opacity-associated protein A, N-terminal BED33_13295 IPR016047 Peptidase M23 BED33_13295 IPR011055 Duplicated hybrid motif BED33_13300 IPR011921 Lipid A biosynthesis myristoyltransferase BED33_13300 IPR004960 Bacterial lipid A biosynthesis acyltransferase BED33_13315 IPR015806 Pyruvate kinase, insert domain superfamily BED33_13315 IPR036918 Pyruvate kinase, C-terminal domain superfamily BED33_13315 IPR018209 Pyruvate kinase, active site BED33_13315 IPR011037 Pyruvate kinase-like, insert domain superfamily BED33_13315 IPR040442 Pyruvate kinase-like domain superfamily BED33_13315 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily BED33_13315 IPR001697 Pyruvate kinase BED33_13315 IPR015795 Pyruvate kinase, C-terminal BED33_13315 IPR015793 Pyruvate kinase, barrel BED33_13320 IPR001347 Sugar isomerase (SIS) BED33_13320 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_13320 IPR000281 Helix-turn-helix protein RpiR BED33_13320 IPR035472 RpiR-like, SIS domain BED33_13320 IPR009057 Homeobox-like domain superfamily BED33_13325 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding BED33_13325 IPR036291 NAD(P)-binding domain superfamily BED33_13325 IPR019796 Glucose-6-phosphate dehydrogenase, active site BED33_13325 IPR001282 Glucose-6-phosphate dehydrogenase BED33_13325 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal BED33_13330 IPR031337 KDPG/KHG aldolase, active site 1 BED33_13330 IPR013785 Aldolase-type TIM barrel BED33_13330 IPR000887 KDPG/KHG aldolase BED33_13330 IPR031338 KDPG/KHG aldolase, active site 2 BED33_13335 IPR023740 Spermidine export protein MdtJ BED33_13335 IPR000390 Small multidrug resistance protein family BED33_13340 IPR023737 Spermidine export protein MdtI BED33_13340 IPR000390 Small multidrug resistance protein family BED33_13345 IPR019897 RidA, conserved site BED33_13345 IPR035959 RutC-like superfamily BED33_13345 IPR006175 YjgF/YER057c/UK114 family BED33_13345 IPR035709 RutC family, YoaB-like BED33_13350 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_13350 IPR014001 Helicase superfamily 1/2, ATP-binding domain BED33_13350 IPR006935 Helicase/UvrB, N-terminal BED33_13350 IPR006555 ATP-dependent helicase, C-terminal BED33_13350 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type BED33_13355 IPR000905 Gcp-like domain BED33_13355 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB BED33_13365 IPR042099 AMP-dependent synthetase-like superfamily BED33_13365 IPR025110 AMP-binding enzyme, C-terminal domain BED33_13365 IPR000873 AMP-dependent synthetase/ligase BED33_13365 IPR020845 AMP-binding, conserved site BED33_13370 IPR002562 3'-5' exonuclease domain BED33_13370 IPR010997 HRDC-like superfamily BED33_13370 IPR002121 HRDC domain BED33_13370 IPR006292 Ribonuclease D BED33_13370 IPR012337 Ribonuclease H-like superfamily BED33_13370 IPR036397 Ribonuclease H superfamily BED33_13375 IPR005527 Cell division topological specificity factor MinE BED33_13375 IPR036707 Cell division topological specificity factor MinE superfamily BED33_13380 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_13380 IPR010223 ATP binding protein MinD, bacterial-type BED33_13380 IPR025501 ATP binding protein MinD BED33_13380 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain BED33_13385 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal BED33_13385 IPR007874 Septum formation inhibitor MinC, N-terminal BED33_13385 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily BED33_13385 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily BED33_13385 IPR013033 Septum formation inhibitor MinC BED33_13385 IPR005526 Septum formation inhibitor MinC, C-terminal BED33_13395 IPR038068 YcgL-like superfamily BED33_13395 IPR027354 YcgL domain BED33_13400 IPR031304 Transglycosylase SLT domain 2 BED33_13400 IPR023346 Lysozyme-like domain superfamily BED33_13400 IPR011757 Lytic transglycosylase MltB BED33_13405 IPR011234 Fumarylacetoacetase-like, C-terminal BED33_13405 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily BED33_13410 IPR005358 Putative zinc- or iron-chelating domain containing protein BED33_13410 IPR008228 Uncharacterised conserved protein UCP006173 BED33_13435 IPR011066 Mechanosensitive ion channel MscS, C-terminal BED33_13435 IPR023408 Mechanosensitive ion channel MscS domain superfamily BED33_13435 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 BED33_13435 IPR006685 Mechanosensitive ion channel MscS BED33_13435 IPR010920 LSM domain superfamily BED33_13435 IPR006686 Mechanosensitive ion channel MscS, conserved site BED33_13440 IPR010987 Glutathione S-transferase, C-terminal-like BED33_13440 IPR036282 Glutathione S-transferase, C-terminal domain superfamily BED33_13440 IPR004045 Glutathione S-transferase, N-terminal BED33_13440 IPR034338 Glutathione S-transferases, subfamily 4, C-terminal BED33_13440 IPR036249 Thioredoxin-like superfamily BED33_13440 IPR040079 Glutathione Transferase family BED33_13460 IPR009950 Protein of unknown function DUF1480 BED33_13490 IPR020846 Major facilitator superfamily domain BED33_13490 IPR036259 MFS transporter superfamily BED33_13490 IPR011701 Major facilitator superfamily BED33_13495 IPR005119 LysR, substrate-binding BED33_13495 IPR036390 Winged helix DNA-binding domain superfamily BED33_13495 IPR037417 HTH-type transcriptional regulator SyrM, PBP2 domain BED33_13495 IPR000847 Transcription regulator HTH, LysR BED33_13495 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_13500 IPR003399 Mce/MlaD BED33_13505 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type BED33_13505 IPR011031 Multihaem cytochrome BED33_13505 IPR007498 Intermembrane transport protein PqiA-like BED33_13510 IPR003018 GAF domain BED33_13510 IPR029016 GAF-like domain superfamily BED33_13510 IPR000614 Free Met sulfoxide reductase conserved site BED33_13515 IPR036442 ProQ/FinO domain superfamily BED33_13515 IPR035236 RNA chaperone ProQ, C-terminal BED33_13515 IPR016103 ProQ/FinO domain BED33_13515 IPR023529 RNA chaperone ProQ BED33_13520 IPR029045 ClpP/crotonase-like domain superfamily BED33_13520 IPR001478 PDZ domain BED33_13520 IPR036034 PDZ superfamily BED33_13520 IPR004447 C-terminal-processing peptidase S41A BED33_13520 IPR040573 Tail specific protease, N-terminal domain BED33_13520 IPR005151 Tail specific protease BED33_13520 IPR020992 Tail specific protease, C-terminal BED33_13525 IPR001915 Peptidase M48 BED33_13525 IPR022919 Peptidase M48, protease HtpX, putative BED33_13540 IPR027946 Oligogalacturonate lyase domain BED33_13540 IPR015943 WD40/YVTN repeat-like-containing domain superfamily BED33_13545 IPR036390 Winged helix DNA-binding domain superfamily BED33_13545 IPR005471 Transcription regulator IclR, N-terminal BED33_13545 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_13545 IPR011991 ArsR-like helix-turn-helix domain BED33_13545 IPR014757 Transcription regulator IclR, C-terminal BED33_13545 IPR029016 GAF-like domain superfamily BED33_13550 IPR002502 N-acetylmuramoyl-L-alanine amidase domain BED33_13550 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily BED33_13550 IPR036366 PGBD superfamily BED33_13550 IPR036365 PGBD-like superfamily BED33_13560 IPR016956 Inner membrane protein YdjM BED33_13560 IPR007404 LexA-binding, inner membrane-associated putative hydrolase BED33_13570 IPR009331 Oligogalacturonate-specific porin BED33_13575 IPR006059 Bacterial extracellular solute-binding protein BED33_13580 IPR040582 MalK, OB fold domain BED33_13580 IPR005116 Transport-associated OB, type 1 BED33_13580 IPR003593 AAA+ ATPase domain BED33_13580 IPR003439 ABC transporter-like BED33_13580 IPR017871 ABC transporter, conserved site BED33_13580 IPR008995 Molybdate/tungstate binding, C-terminal BED33_13580 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_13585 IPR035906 MetI-like superfamily BED33_13585 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED33_13590 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED33_13590 IPR035906 MetI-like superfamily BED33_13595 IPR010702 Periplasmic pectate lyase BED33_13600 IPR002347 Short-chain dehydrogenase/reductase SDR BED33_13600 IPR020904 Short-chain dehydrogenase/reductase, conserved site BED33_13600 IPR036291 NAD(P)-binding domain superfamily BED33_13600 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase BED33_13605 IPR021120 KduI/IolB isomerase BED33_13605 IPR011051 RmlC-like cupin domain superfamily BED33_13605 IPR007045 5-keto 4-deoxyuronate isomerase BED33_13605 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal BED33_13605 IPR014710 RmlC-like jelly roll fold BED33_13610 IPR011051 RmlC-like cupin domain superfamily BED33_13610 IPR014710 RmlC-like jelly roll fold BED33_13610 IPR025499 Pectin degradation protein KdgF BED33_13610 IPR013096 Cupin 2, conserved barrel BED33_13615 IPR001207 Transposase, mutator type BED33_13620 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BED33_13620 IPR023214 HAD superfamily BED33_13620 IPR041492 Haloacid dehalogenase-like hydrolase BED33_13620 IPR006439 HAD hydrolase, subfamily IA BED33_13620 IPR036412 HAD-like superfamily BED33_13625 IPR025229 YniB-like protein BED33_13630 IPR005119 LysR, substrate-binding BED33_13630 IPR000847 Transcription regulator HTH, LysR BED33_13630 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_13630 IPR036390 Winged helix DNA-binding domain superfamily BED33_13635 IPR017821 Succinate CoA transferase BED33_13635 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily BED33_13635 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain BED33_13635 IPR037171 NagB/RpiA transferase-like BED33_13635 IPR003702 Acetyl-CoA hydrolase/transferase BED33_13640 IPR029045 ClpP/crotonase-like domain superfamily BED33_13640 IPR001753 Enoyl-CoA hydratase/isomerase BED33_13640 IPR014748 Enoyl-CoA hydratase, C-terminal BED33_13640 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site BED33_13645 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_13645 IPR005129 SIMIBI class G3E GTPase, ArgK/MeaB BED33_13660 IPR037294 ABC transporter, BtuC-like BED33_13660 IPR001626 ABC transporter, TroCD-like BED33_13665 IPR001626 ABC transporter, TroCD-like BED33_13665 IPR037294 ABC transporter, BtuC-like BED33_13670 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_13670 IPR003593 AAA+ ATPase domain BED33_13670 IPR003439 ABC transporter-like BED33_13670 IPR017871 ABC transporter, conserved site BED33_13675 IPR006129 Adhesin B BED33_13675 IPR006127 Periplasmic solute binding protein, ZnuA-like BED33_13675 IPR006128 Adhesion lipoprotein BED33_13680 IPR008258 Transglycosylase SLT domain 1 BED33_13680 IPR023346 Lysozyme-like domain superfamily BED33_13680 IPR023946 Endo-type membrane-bound lytic murein transglycosylase A BED33_13680 IPR000189 Prokaryotic transglycosylase, active site BED33_13685 IPR002771 Multiple antibiotic resistance (MarC)-related BED33_13710 IPR007563 Protein of unknown function DUF554 BED33_13715 IPR025309 KTSC domain BED33_13720 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily BED33_13720 IPR004095 TGS BED33_13720 IPR012675 Beta-grasp domain superfamily BED33_13720 IPR033728 Threonine-tRNA ligase catalytic core domain BED33_13720 IPR012676 TGS-like BED33_13720 IPR002320 Threonine-tRNA ligase, class IIa BED33_13720 IPR036621 Anticodon-binding domain superfamily BED33_13720 IPR012947 Threonyl/alanyl tRNA synthetase, SAD BED33_13720 IPR004154 Anticodon-binding BED33_13720 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) BED33_13720 IPR006195 Aminoacyl-tRNA synthetase, class II BED33_13725 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily BED33_13725 IPR001288 Translation initiation factor 3 BED33_13725 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily BED33_13725 IPR019813 Translation initiation factor 3, conserved site BED33_13725 IPR019814 Translation initiation factor 3, N-terminal BED33_13725 IPR019815 Translation initiation factor 3, C-terminal BED33_13730 IPR021137 Ribosomal protein L35 BED33_13730 IPR037229 Ribosomal protein L35 superfamily BED33_13730 IPR001706 Ribosomal protein L35, non-mitochondrial BED33_13730 IPR018265 Ribosomal protein L35, conserved site BED33_13735 IPR005813 Ribosomal protein L20 BED33_13735 IPR035566 Ribosomal protein L20, C-terminal BED33_13740 IPR006195 Aminoacyl-tRNA synthetase, class II BED33_13740 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial BED33_13740 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit BED33_13740 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal BED33_13740 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm BED33_13740 IPR002319 Phenylalanyl-tRNA synthetase BED33_13745 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 BED33_13745 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily BED33_13745 IPR005146 B3/B4 tRNA-binding domain BED33_13745 IPR005121 Ferrodoxin-fold anticodon-binding domain BED33_13745 IPR012340 Nucleic acid-binding, OB-fold BED33_13745 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain BED33_13745 IPR005147 tRNA synthetase, B5-domain BED33_13745 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain BED33_13745 IPR002547 tRNA-binding domain BED33_13745 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit BED33_13745 IPR009061 Putative DNA-binding domain superfamily BED33_13750 IPR005684 Integration host factor, alpha subunit BED33_13750 IPR020816 Histone-like DNA-binding protein, conserved site BED33_13750 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily BED33_13750 IPR000119 Histone-like DNA-binding protein BED33_13755 IPR038717 Tc1-like transposase, DDE domain BED33_13755 IPR025959 Winged helix-turn helix domain BED33_13755 IPR012337 Ribonuclease H-like superfamily BED33_13755 IPR009057 Homeobox-like domain superfamily BED33_13765 IPR037294 ABC transporter, BtuC-like BED33_13765 IPR000522 ABC transporter, permease protein, BtuC-like BED33_13765 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC BED33_13770 IPR033674 Thioredoxin/glutathione peroxidase BtuE BED33_13770 IPR029759 Glutathione peroxidase active site BED33_13770 IPR029760 Glutathione peroxidase conserved site BED33_13770 IPR036249 Thioredoxin-like superfamily BED33_13770 IPR000889 Glutathione peroxidase BED33_13775 IPR017871 ABC transporter, conserved site BED33_13775 IPR003593 AAA+ ATPase domain BED33_13775 IPR003439 ABC transporter-like BED33_13775 IPR023693 ABC transporter, vitamin B12, BtuD BED33_13775 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_13780 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED33_13780 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase BED33_13780 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED33_13780 IPR022850 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase, ArnB BED33_13780 IPR015424 Pyridoxal phosphate-dependent transferase BED33_13785 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase BED33_13785 IPR029044 Nucleotide-diphospho-sugar transferases BED33_13785 IPR001173 Glycosyltransferase 2-like BED33_13790 IPR011034 Formyl transferase-like, C-terminal domain superfamily BED33_13790 IPR036477 Formyl transferase, N-terminal domain superfamily BED33_13790 IPR021168 Bifunctional polymyxin resistance protein, ArnA BED33_13790 IPR002376 Formyl transferase, N-terminal BED33_13790 IPR036291 NAD(P)-binding domain superfamily BED33_13790 IPR001509 NAD-dependent epimerase/dehydratase BED33_13790 IPR005793 Formyl transferase, C-terminal BED33_13795 IPR002509 NodB homology domain BED33_13795 IPR023557 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD, probable BED33_13795 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel BED33_13800 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase BED33_13800 IPR003342 Glycosyl transferase family 39/83 BED33_13805 IPR022883 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase, subunit ArnE BED33_13805 IPR000620 EamA domain BED33_13805 IPR000390 Small multidrug resistance protein family BED33_13810 IPR022832 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF BED33_13810 IPR000390 Small multidrug resistance protein family BED33_13815 IPR038765 Papain-like cysteine peptidase superfamily BED33_13815 IPR000064 Endopeptidase, NLPC/P60 domain BED33_13825 IPR003846 Protein adenylyltransferase SelO BED33_13840 IPR010916 TonB box, conserved site BED33_13840 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BED33_13840 IPR039426 Vitamin B12 transporter BtuB-like BED33_13840 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor BED33_13840 IPR011276 TonB-dependent haem/haemoglobin receptor BED33_13840 IPR000531 TonB-dependent receptor-like, beta-barrel BED33_13840 IPR037066 TonB-dependent receptor, plug domain superfamily BED33_13840 IPR012910 TonB-dependent receptor, plug domain BED33_13845 IPR019600 Hemin uptake protein HemP BED33_13850 IPR013785 Aldolase-type TIM barrel BED33_13850 IPR006219 DHAP synthase, class 1 BED33_13850 IPR006218 DAHP synthetase I/KDSA BED33_13855 IPR005177 Bifunctional kinase-pyrophosphorylase BED33_13855 IPR026530 Phosphoenolpyruvate synthase regulatory protein BED33_13855 IPR008917 Transcription factor, Skn-1-like, DNA-binding domain superfamily BED33_13860 IPR008279 PEP-utilising enzyme, mobile domain BED33_13860 IPR006319 Phosphoenolpyruvate synthase BED33_13860 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding BED33_13860 IPR018274 PEP-utilising enzyme, active site BED33_13860 IPR013815 ATP-grasp fold, subdomain 1 BED33_13860 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily BED33_13860 IPR000121 PEP-utilising enzyme, C-terminal BED33_13860 IPR036637 Phosphohistidine domain superfamily BED33_13860 IPR023151 PEP-utilising enzyme, conserved site BED33_13860 IPR040442 Pyruvate kinase-like domain superfamily BED33_13870 IPR002549 Transmembrane protein TqsA-like BED33_13875 IPR006094 FAD linked oxidase, N-terminal BED33_13875 IPR016164 FAD-linked oxidase-like, C-terminal BED33_13875 IPR004113 FAD-linked oxidase, C-terminal BED33_13875 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BED33_13875 IPR036318 FAD-binding, type PCMH-like superfamily BED33_13875 IPR009051 Alpha-helical ferredoxin BED33_13875 IPR016166 FAD-binding domain, PCMH-type BED33_13875 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BED33_13880 IPR003736 Phenylacetic acid degradation-related domain BED33_13880 IPR006683 Thioesterase domain BED33_13880 IPR030863 1,4-dihydroxy-2-naphthoyl-CoA hydrolase, MenI BED33_13880 IPR029069 HotDog domain superfamily BED33_13885 IPR035903 HesB-like domain superfamily BED33_13885 IPR011298 FeS assembly scaffold SufA BED33_13885 IPR000361 FeS cluster biogenesis BED33_13885 IPR016092 FeS cluster insertion protein BED33_13885 IPR017870 FeS cluster insertion, C-terminal, conserved site BED33_13890 IPR010231 SUF system FeS cluster assembly, SufB BED33_13890 IPR000825 SUF system FeS cluster assembly, SufBD BED33_13890 IPR037284 SUF system FeS cluster assembly, SufBD superfamily BED33_13895 IPR003593 AAA+ ATPase domain BED33_13895 IPR003439 ABC transporter-like BED33_13895 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_13895 IPR017871 ABC transporter, conserved site BED33_13895 IPR010230 FeS cluster assembly SUF system, ATPase SufC BED33_13900 IPR037284 SUF system FeS cluster assembly, SufBD superfamily BED33_13900 IPR011542 SUF system FeS cluster assembly, SufD BED33_13900 IPR000825 SUF system FeS cluster assembly, SufBD BED33_13905 IPR000192 Aminotransferase class V domain BED33_13905 IPR015424 Pyridoxal phosphate-dependent transferase BED33_13905 IPR010970 Cysteine desulfurase, SufS BED33_13905 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED33_13905 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED33_13905 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site BED33_13910 IPR003808 Fe-S metabolism associated domain, SufE-like BED33_13910 IPR023939 Cysteine desulfuration protein SufE BED33_13915 IPR041597 L,D-transpeptidase C-terminal domain BED33_13915 IPR005490 L,D-transpeptidase catalytic domain BED33_13915 IPR038063 L,D-transpeptidase catalytic domain-like BED33_13915 IPR018392 LysM domain BED33_13920 IPR016367 Murein-lipoprotein BED33_13920 IPR006817 Lipoprotein leucine-zipper BED33_13925 IPR015806 Pyruvate kinase, insert domain superfamily BED33_13925 IPR036918 Pyruvate kinase, C-terminal domain superfamily BED33_13925 IPR015795 Pyruvate kinase, C-terminal BED33_13925 IPR015793 Pyruvate kinase, barrel BED33_13925 IPR018209 Pyruvate kinase, active site BED33_13925 IPR011037 Pyruvate kinase-like, insert domain superfamily BED33_13925 IPR040442 Pyruvate kinase-like domain superfamily BED33_13925 IPR001697 Pyruvate kinase BED33_13925 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily BED33_13945 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily BED33_13945 IPR017938 Riboflavin synthase-like beta-barrel BED33_13945 IPR026017 Lumazine-binding domain BED33_13945 IPR001783 Lumazine-binding protein BED33_13950 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED33_13950 IPR003333 Mycolic acid cyclopropane synthase BED33_13955 IPR036259 MFS transporter superfamily BED33_13955 IPR020846 Major facilitator superfamily domain BED33_13955 IPR011701 Major facilitator superfamily BED33_13955 IPR004812 Drug resistance transporter Bcr/CmlA subfamily BED33_13960 IPR000847 Transcription regulator HTH, LysR BED33_13960 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_13960 IPR005119 LysR, substrate-binding BED33_13960 IPR036390 Winged helix DNA-binding domain superfamily BED33_13965 IPR023588 Transcription regulator HTH, PurR BED33_13965 IPR028082 Periplasmic binding protein-like I BED33_13965 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BED33_13965 IPR000843 LacI-type HTH domain BED33_13970 IPR001189 Manganese/iron superoxide dismutase BED33_13970 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily BED33_13970 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily BED33_13970 IPR019831 Manganese/iron superoxide dismutase, N-terminal BED33_13970 IPR019832 Manganese/iron superoxide dismutase, C-terminal BED33_13970 IPR019833 Manganese/iron superoxide dismutase, binding site BED33_13975 IPR000064 Endopeptidase, NLPC/P60 domain BED33_13975 IPR038765 Papain-like cysteine peptidase superfamily BED33_13980 IPR002109 Glutaredoxin BED33_13980 IPR033658 Glutaredoxin, PICOT-like BED33_13980 IPR014434 Monothiol glutaredoxin BED33_13980 IPR004480 Monothiol glutaredoxin-related BED33_13980 IPR036249 Thioredoxin-like superfamily BED33_13985 IPR036397 Ribonuclease H superfamily BED33_13985 IPR005987 Ribonuclease T BED33_13985 IPR012337 Ribonuclease H-like superfamily BED33_13985 IPR013520 Exonuclease, RNase T/DNA polymerase III BED33_13995 IPR037523 Vicinal oxygen chelate (VOC) domain BED33_13995 IPR018146 Glyoxalase I, conserved site BED33_13995 IPR004361 Glyoxalase I BED33_13995 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BED33_13995 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BED33_14005 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BED33_14005 IPR001647 DNA-binding HTH domain, TetR-type BED33_14005 IPR009057 Homeobox-like domain superfamily BED33_14005 IPR011075 Tetracyclin repressor-like, C-terminal domain BED33_14010 IPR017850 Alkaline-phosphatase-like, core domain superfamily BED33_14010 IPR040423 Phosphoethanolamine transferase BED33_14010 IPR000917 Sulfatase, N-terminal BED33_14010 IPR012549 Phosphoethanolamine transferase, N-terminal BED33_14015 IPR010710 Protein of unknown function DUF1289 BED33_14020 IPR036812 NADP-dependent oxidoreductase domain superfamily BED33_14020 IPR023210 NADP-dependent oxidoreductase domain BED33_14020 IPR020471 Aldo/keto reductase BED33_14025 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein BED33_14035 IPR012451 Protein of unknown function DUF1656 BED33_14040 IPR023071 Transcriptional regulator, SlyA BED33_14040 IPR023187 Transcriptional regulator MarR-type, conserved site BED33_14040 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_14040 IPR000835 MarR-type HTH domain BED33_14040 IPR036390 Winged helix DNA-binding domain superfamily BED33_14045 IPR008816 Glycine zipper 2TM domain BED33_14050 IPR005338 Anhydro-N-acetylmuramic acid kinase BED33_14055 IPR036328 C-type lysozyme inhibitor superfamily BED33_14055 IPR018660 C-type lysozyme inhibitor BED33_14060 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site BED33_14060 IPR012349 FMN-binding split barrel BED33_14060 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal BED33_14060 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative BED33_14060 IPR000659 Pyridoxamine 5'-phosphate oxidase BED33_14065 IPR002305 Aminoacyl-tRNA synthetase, class Ic BED33_14065 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site BED33_14065 IPR002307 Tyrosine-tRNA ligase BED33_14065 IPR024088 Tyrosine-tRNA ligase, bacterial-type BED33_14065 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 BED33_14065 IPR036986 RNA-binding S4 domain superfamily BED33_14065 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED33_14065 IPR002942 RNA-binding S4 domain BED33_14075 IPR004046 Glutathione S-transferase, C-terminal BED33_14075 IPR036249 Thioredoxin-like superfamily BED33_14075 IPR004045 Glutathione S-transferase, N-terminal BED33_14075 IPR040079 Glutathione Transferase family BED33_14075 IPR036282 Glutathione S-transferase, C-terminal domain superfamily BED33_14075 IPR010987 Glutathione S-transferase, C-terminal-like BED33_14080 IPR020317 Uncharacterised protein family YjbD BED33_14085 IPR006977 Yip1 domain BED33_14095 IPR003346 Transposase, IS116/IS110/IS902 BED33_14095 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED33_14100 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site BED33_14100 IPR036259 MFS transporter superfamily BED33_14100 IPR023517 Amino acid/peptide transporter family, dipeptide and tripeptide permease A BED33_14100 IPR005279 Dipeptide/tripeptide permease BED33_14100 IPR000109 Proton-dependent oligopeptide transporter family BED33_14105 IPR005119 LysR, substrate-binding BED33_14105 IPR000847 Transcription regulator HTH, LysR BED33_14105 IPR036390 Winged helix DNA-binding domain superfamily BED33_14105 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_14110 IPR029032 AhpD-like BED33_14120 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_14120 IPR003439 ABC transporter-like BED33_14120 IPR003593 AAA+ ATPase domain BED33_14120 IPR017871 ABC transporter, conserved site BED33_14125 IPR003593 AAA+ ATPase domain BED33_14125 IPR003439 ABC transporter-like BED33_14125 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal BED33_14125 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_14130 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED33_14130 IPR035906 MetI-like superfamily BED33_14130 IPR025966 Oligopeptide transport permease C-like, N-terminal domain BED33_14135 IPR035906 MetI-like superfamily BED33_14135 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED33_14140 IPR039424 Solute-binding protein family 5 BED33_14140 IPR023765 Solute-binding protein family 5, conserved site BED33_14140 IPR000914 Solute-binding protein family 5 domain BED33_14140 IPR030678 Peptide/nickel binding protein, MppA-type BED33_14155 IPR014317 Transcription activator PspF BED33_14155 IPR002078 RNA polymerase sigma factor 54 interaction domain BED33_14155 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_14155 IPR002197 DNA binding HTH domain, Fis-type BED33_14155 IPR009057 Homeobox-like domain superfamily BED33_14155 IPR003593 AAA+ ATPase domain BED33_14155 IPR025944 Sigma-54 interaction domain, conserved site BED33_14155 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BED33_14160 IPR007157 PspA/IM30 BED33_14160 IPR014319 Phage shock protein, PspA BED33_14165 IPR009554 Phage shock protein B BED33_14170 IPR007168 Phage shock protein, PspC, N-terminal BED33_14170 IPR014320 Phage shock protein, PspC BED33_14180 IPR007413 Protein of unknown function DUF463, YcjX-like protein BED33_14185 IPR006507 Uncharacterised protein family UPF0283 BED33_14185 IPR021147 Protein of unknown function DUF697 BED33_14200 IPR030828 TyrR family, helix-turn-helix domain BED33_14200 IPR009057 Homeobox-like domain superfamily BED33_14200 IPR002912 ACT domain BED33_14200 IPR003593 AAA+ ATPase domain BED33_14200 IPR000014 PAS domain BED33_14200 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_14200 IPR025944 Sigma-54 interaction domain, conserved site BED33_14200 IPR035965 PAS domain superfamily BED33_14200 IPR002078 RNA polymerase sigma factor 54 interaction domain BED33_14200 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BED33_14200 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BED33_14205 IPR013740 Redoxin BED33_14205 IPR013766 Thioredoxin domain BED33_14205 IPR002065 Thiol peroxidase Tpx BED33_14205 IPR018219 Thiol peroxidase conserved site BED33_14205 IPR036249 Thioredoxin-like superfamily BED33_14210 IPR034603 Dipeptide epimerase BED33_14210 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site BED33_14210 IPR029065 Enolase C-terminal domain-like BED33_14210 IPR029017 Enolase-like, N-terminal BED33_14210 IPR036849 Enolase-like, C-terminal domain superfamily BED33_14210 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal BED33_14210 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain BED33_14215 IPR000834 Peptidase M14, carboxypeptidase A BED33_14220 IPR039424 Solute-binding protein family 5 BED33_14220 IPR030678 Peptide/nickel binding protein, MppA-type BED33_14220 IPR023765 Solute-binding protein family 5, conserved site BED33_14220 IPR000914 Solute-binding protein family 5 domain BED33_14225 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB BED33_14225 IPR023714 Zinc transport protein ZntB BED33_14230 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type BED33_14230 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal BED33_14230 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase BED33_14230 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED33_14235 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily BED33_14235 IPR000909 Phosphatidylinositol-specific phospholipase C, X domain BED33_14245 IPR000390 Small multidrug resistance protein family BED33_14250 IPR003416 MgtC/SapB/SrpB/YhiD family BED33_14255 IPR005590 Protein of unknown function DUF333 BED33_14260 IPR036291 NAD(P)-binding domain superfamily BED33_14260 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BED33_14260 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain BED33_14260 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 BED33_14260 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site BED33_14265 IPR021730 Dicarboxylate transport BED33_14270 IPR025985 YnbE-like lipoprotein BED33_14275 IPR008309 Uncharacterised conserved protein UCP025560 BED33_14280 IPR029039 Flavoprotein-like superfamily BED33_14280 IPR003680 Flavodoxin-like fold BED33_14280 IPR023048 NADH-azoreductase, FMN-dependent BED33_14285 IPR011545 DEAD/DEAH box helicase domain BED33_14285 IPR003593 AAA+ ATPase domain BED33_14285 IPR011709 Domain of unknown function DUF1605 BED33_14285 IPR007502 Helicase-associated domain BED33_14285 IPR014001 Helicase superfamily 1/2, ATP-binding domain BED33_14285 IPR001650 Helicase, C-terminal BED33_14285 IPR024590 RNA helicase HrpA, C-terminal BED33_14285 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_14285 IPR010222 RNA helicase HrpA BED33_14300 IPR009003 Peptidase S1, PA clan BED33_14300 IPR008256 Peptidase S1B BED33_14300 IPR001254 Serine proteases, trypsin domain BED33_14300 IPR033116 Serine proteases, trypsin family, serine active site BED33_14300 IPR018114 Serine proteases, trypsin family, histidine active site BED33_14310 IPR001333 Peptidase M32, carboxypeptidase Taq BED33_14315 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BED33_14315 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BED33_14315 IPR005467 Histidine kinase domain BED33_14315 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BED33_14315 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BED33_14315 IPR003594 Histidine kinase/HSP90-like ATPase BED33_14315 IPR003660 HAMP domain BED33_14320 IPR039420 Transcriptional regulatory protein WalR-like BED33_14320 IPR016032 Signal transduction response regulator, C-terminal effector BED33_14320 IPR001867 OmpR/PhoB-type DNA-binding domain BED33_14320 IPR011006 CheY-like superfamily BED33_14320 IPR001789 Signal transduction response regulator, receiver domain BED33_14320 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_14330 IPR004754 Amino acid antiporter BED33_14330 IPR002293 Amino acid/polyamine transporter I BED33_14335 IPR025539 YdgH protein BED33_14335 IPR025543 Dodecin-like BED33_14335 IPR036275 YdgH-like superfamily BED33_14335 IPR010854 Domain of unknown function DUF1471 BED33_14345 IPR026255 NAD(P) transhydrogenase, alpha subunit BED33_14345 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 BED33_14345 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 BED33_14345 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal BED33_14345 IPR036291 NAD(P)-binding domain superfamily BED33_14345 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal BED33_14345 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain BED33_14350 IPR034300 NADP transhydrogenase beta-like domain BED33_14350 IPR012136 NADP transhydrogenase, beta subunit BED33_14350 IPR029035 DHS-like NAD/FAD-binding domain superfamily BED33_14355 IPR006016 UspA BED33_14360 IPR036390 Winged helix DNA-binding domain superfamily BED33_14360 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_14360 IPR014710 RmlC-like jelly roll fold BED33_14360 IPR012318 Crp-type HTH domain BED33_14360 IPR018490 Cyclic nucleotide-binding-like BED33_14360 IPR018335 Transcription regulator HTH, Crp-type, conserved site BED33_14360 IPR000595 Cyclic nucleotide-binding domain BED33_14365 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_14365 IPR023546 Methylated-DNA--protein-cysteine methyltransferase BED33_14365 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain BED33_14365 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain BED33_14365 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding BED33_14365 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site BED33_14365 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily BED33_14380 IPR011256 Regulatory factor, effector binding domain superfamily BED33_14380 IPR029442 GyrI-like small molecule binding domain BED33_14380 IPR024911 DNA gyrase inhibitor GyrI BED33_14380 IPR010499 Bacterial transcription activator, effector binding BED33_14385 IPR002347 Short-chain dehydrogenase/reductase SDR BED33_14385 IPR020904 Short-chain dehydrogenase/reductase, conserved site BED33_14385 IPR036291 NAD(P)-binding domain superfamily BED33_14410 IPR036412 HAD-like superfamily BED33_14410 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BED33_14410 IPR023214 HAD superfamily BED33_14410 IPR041492 Haloacid dehalogenase-like hydrolase BED33_14410 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB BED33_14410 IPR006439 HAD hydrolase, subfamily IA BED33_14415 IPR004789 Acetolactate synthase, small subunit BED33_14415 IPR002912 ACT domain BED33_14415 IPR039557 AHAS, ACT domain BED33_14420 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain BED33_14420 IPR029061 Thiamin diphosphate-binding fold BED33_14420 IPR012000 Thiamine pyrophosphate enzyme, central domain BED33_14420 IPR029035 DHS-like NAD/FAD-binding domain superfamily BED33_14420 IPR012846 Acetolactate synthase, large subunit, biosynthetic BED33_14420 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding BED33_14420 IPR039368 Acetolactate synthase large subunit, TPP binding domain BED33_14420 IPR000399 TPP-binding enzyme, conserved site BED33_14430 IPR002502 N-acetylmuramoyl-L-alanine amidase domain BED33_14430 IPR036365 PGBD-like superfamily BED33_14430 IPR036366 PGBD superfamily BED33_14430 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily BED33_14470 IPR005119 LysR, substrate-binding BED33_14470 IPR036390 Winged helix DNA-binding domain superfamily BED33_14470 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_14470 IPR000847 Transcription regulator HTH, LysR BED33_14475 IPR005829 Sugar transporter, conserved site BED33_14475 IPR036259 MFS transporter superfamily BED33_14475 IPR011701 Major facilitator superfamily BED33_14475 IPR020846 Major facilitator superfamily domain BED33_14485 IPR000871 Beta-lactamase, class-A BED33_14485 IPR023650 Beta-lactamase, class-A active site BED33_14485 IPR012338 Beta-lactamase/transpeptidase-like BED33_14490 IPR008865 DNA replication terminus site-binding protein BED33_14490 IPR036381 Replication terminator Tus, domain 1 BED33_14490 IPR036384 Replication terminator Tus superfamily BED33_14500 IPR020557 Fumarate lyase, conserved site BED33_14500 IPR022761 Fumarate lyase, N-terminal BED33_14500 IPR000362 Fumarate lyase family BED33_14500 IPR018951 Fumarase C, C-terminal BED33_14500 IPR008948 L-Aspartase-like BED33_14500 IPR005677 Fumarate hydratase, class II BED33_14500 IPR024083 Fumarase/histidase, N-terminal BED33_14505 IPR011051 RmlC-like cupin domain superfamily BED33_14505 IPR001250 Mannose-6-phosphate isomerase, type I BED33_14505 IPR014710 RmlC-like jelly roll fold BED33_14505 IPR016305 Mannose-6-phosphate isomerase BED33_14505 IPR018050 Phosphomannose isomerase, type I, conserved site BED33_14510 IPR010352 Protein of unknown function DUF945 BED33_14520 IPR028082 Periplasmic binding protein-like I BED33_14520 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BED33_14520 IPR000843 LacI-type HTH domain BED33_14520 IPR001761 Periplasmic binding protein/LacI sugar binding domain BED33_14525 IPR001996 Phosphotransferase system, IIB component, type 1 BED33_14525 IPR011301 PTS system, maltose/glucose-specific IIBC component BED33_14525 IPR036878 Glucose permease domain IIB BED33_14525 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site BED33_14525 IPR003352 Phosphotransferase system, EIIC BED33_14525 IPR013013 Phosphotransferase system, EIIC component, type 1 BED33_14525 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component BED33_14530 IPR004839 Aminotransferase, class I/classII BED33_14530 IPR027619 Putative C-S lyase BED33_14530 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED33_14530 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED33_14530 IPR015424 Pyridoxal phosphate-dependent transferase BED33_14535 IPR006650 Adenosine/AMP deaminase active site BED33_14535 IPR001365 Adenosine/AMP deaminase domain BED33_14535 IPR032466 Metal-dependent hydrolase BED33_14535 IPR006330 Adenosine/adenine deaminase BED33_14535 IPR028893 Adenosine deaminase BED33_14540 IPR016833 Putative sodium bile acid cotransporter BED33_14540 IPR038770 Sodium/solute symporter superfamily BED33_14545 IPR004104 Oxidoreductase, C-terminal BED33_14545 IPR036291 NAD(P)-binding domain superfamily BED33_14545 IPR000683 Oxidoreductase, N-terminal BED33_14550 IPR003313 AraC-type arabinose-binding/dimerisation domain BED33_14550 IPR018060 DNA binding HTH domain, AraC-type BED33_14550 IPR018062 HTH domain AraC-type, conserved site BED33_14550 IPR020449 Transcription regulator HTH, AraC- type BED33_14550 IPR009057 Homeobox-like domain superfamily BED33_14550 IPR037923 Transcription regulator HTH-like BED33_14560 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_14560 IPR003439 ABC transporter-like BED33_14560 IPR003593 AAA+ ATPase domain BED33_14560 IPR017917 ABC transporter, arabinose import, ATP-binding protein, AraG BED33_14560 IPR017871 ABC transporter, conserved site BED33_14565 IPR026266 L-arabinose-binding periplasmic protein BED33_14565 IPR001761 Periplasmic binding protein/LacI sugar binding domain BED33_14565 IPR028082 Periplasmic binding protein-like I BED33_14570 IPR018485 Carbohydrate kinase, FGGY, C-terminal BED33_14570 IPR005929 Ribulokinase BED33_14575 IPR004216 L-fucose/L-arabinose isomerase, C-terminal BED33_14575 IPR003762 L-arabinose isomerase BED33_14575 IPR038583 L-arabinose isomerase, N-terminal domain superfamily BED33_14575 IPR009015 L-fucose isomerase, N-terminal/central domain superfamily BED33_14575 IPR024664 L-arabinose isomerase, C-terminal BED33_14585 IPR001238 DNA-binding, RecF BED33_14585 IPR018078 DNA-binding, RecF, conserved site BED33_14585 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_14585 IPR003395 RecF/RecN/SMC, N-terminal BED33_14585 IPR042174 DNA-binding RecF, domain 2 BED33_14595 IPR010129 Type I secretion membrane fusion protein, HlyD family BED33_14595 IPR006144 Secretion protein HlyD, conserved site BED33_14610 IPR019690 Protein of unknown function DUF2569 BED33_14615 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA BED33_14615 IPR003667 NqrDE/RnfAE BED33_14620 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB BED33_14620 IPR007202 4Fe-4S domain BED33_14620 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BED33_14620 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BED33_14620 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria BED33_14620 IPR011005 Dihydropteroate synthase-like BED33_14625 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BED33_14625 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BED33_14625 IPR009051 Alpha-helical ferredoxin BED33_14625 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC BED33_14625 IPR019554 Soluble ligand binding domain BED33_14625 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily BED33_14625 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain BED33_14625 IPR026902 RnfC Barrel sandwich hybrid domain BED33_14635 IPR011256 Regulatory factor, effector binding domain superfamily BED33_14635 IPR018062 HTH domain AraC-type, conserved site BED33_14635 IPR020449 Transcription regulator HTH, AraC- type BED33_14635 IPR018060 DNA binding HTH domain, AraC-type BED33_14635 IPR009057 Homeobox-like domain superfamily BED33_14635 IPR029442 GyrI-like small molecule binding domain BED33_14635 IPR010499 Bacterial transcription activator, effector binding BED33_14640 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD BED33_14640 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D BED33_14645 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG BED33_14645 IPR007329 FMN-binding BED33_14650 IPR010968 Ion-translocating oxidoreductase complex subunit E BED33_14650 IPR003667 NqrDE/RnfAE BED33_14655 IPR003265 HhH-GPD domain BED33_14655 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal BED33_14655 IPR004035 Endonuclease III, iron-sulphur binding site BED33_14655 IPR004036 Endonuclease III-like, conserved site-2 BED33_14655 IPR011257 DNA glycosylase BED33_14655 IPR005759 Endonuclease III BED33_14655 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif BED33_14655 IPR000445 Helix-hairpin-helix motif BED33_14730 IPR000086 NUDIX hydrolase domain BED33_14730 IPR015797 NUDIX hydrolase-like domain superfamily BED33_14730 IPR020084 NUDIX hydrolase, conserved site BED33_14730 IPR020476 NUDIX hydrolase BED33_14755 IPR004929 Spanin, inner membrane subunit BED33_14820 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_14820 IPR002611 IstB-like ATP-binding protein BED33_14820 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein BED33_14845 IPR039418 LexA-like BED33_14845 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BED33_14845 IPR001387 Cro/C1-type helix-turn-helix domain BED33_14845 IPR015927 Peptidase S24/S26A/S26B/S26C BED33_14845 IPR036286 LexA/Signal peptidase-like superfamily BED33_14905 IPR024432 Putative exodeoxyribonuclease 8, PDDEXK-like domain BED33_14905 IPR010584 Exodeoxyribonuclease 8 BED33_14925 IPR003029 S1 domain BED33_14925 IPR011129 Cold shock domain BED33_14925 IPR013223 Ribonuclease B, N-terminal OB domain BED33_14925 IPR012340 Nucleic acid-binding, OB-fold BED33_14925 IPR011804 Ribonuclease II BED33_14925 IPR001900 Ribonuclease II/R BED33_14925 IPR004476 Ribonuclease II/ribonuclease R BED33_14925 IPR022966 Ribonuclease II/R, conserved site BED33_14930 IPR025299 CstA, C-terminal domain BED33_14930 IPR003706 CstA, N-terminal domain BED33_14935 IPR007423 Selenoprotein, putative BED33_14940 IPR033919 Transaldolase/Fructose-6-phosphate aldolase, archaeal/bacterial BED33_14940 IPR018225 Transaldolase, active site BED33_14940 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase BED33_14940 IPR023001 Fructose-6-phosphate aldolase BED33_14940 IPR013785 Aldolase-type TIM barrel BED33_14940 IPR001585 Transaldolase/Fructose-6-phosphate aldolase BED33_14945 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_14945 IPR001034 DeoR-type HTH domain BED33_14945 IPR036390 Winged helix DNA-binding domain superfamily BED33_14945 IPR014036 DeoR C-terminal sensor domain BED33_14945 IPR018356 Transcription regulator, HTH DeoR-type, conserved site BED33_14945 IPR037171 NagB/RpiA transferase-like BED33_14955 IPR036409 Class II aldolase/adducin N-terminal domain superfamily BED33_14955 IPR001303 Class II aldolase/adducin N-terminal BED33_14955 IPR004661 L-ribulose-5-phosphate 4-epimerase BED33_14955 IPR033748 L-ribulose-5-phosphate 4-epimerase AraD BED33_14960 IPR008816 Glycine zipper 2TM domain BED33_14965 IPR001950 SUI1 domain BED33_14965 IPR005872 Archaeal/bacterial translation initiation factor SUI1 BED33_14965 IPR036877 SUI1 domain superfamily BED33_14970 IPR014732 Orotidine 5'-phosphate decarboxylase BED33_14970 IPR013785 Aldolase-type TIM barrel BED33_14970 IPR001754 Orotidine 5'-phosphate decarboxylase domain BED33_14970 IPR011060 Ribulose-phosphate binding barrel BED33_14970 IPR018089 Orotidine 5'-phosphate decarboxylase, active site BED33_14975 IPR010854 Domain of unknown function DUF1471 BED33_14975 IPR025543 Dodecin-like BED33_14975 IPR036275 YdgH-like superfamily BED33_14980 IPR004711 Benzoate transporter BED33_14985 IPR013096 Cupin 2, conserved barrel BED33_14985 IPR011051 RmlC-like cupin domain superfamily BED33_14985 IPR001387 Cro/C1-type helix-turn-helix domain BED33_14985 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BED33_14985 IPR014710 RmlC-like jelly roll fold BED33_14995 IPR011990 Tetratricopeptide-like helical domain superfamily BED33_14995 IPR030865 Lipopolysaccharide assembly protein B BED33_14995 IPR019734 Tetratricopeptide repeat BED33_14995 IPR041166 LapB, rubredoxin metal binding domain BED33_14995 IPR013026 Tetratricopeptide repeat-containing domain BED33_15000 IPR010445 Lipopolysaccharide assembly protein A domain BED33_15000 IPR032906 Lipopolysaccharide assembly protein A BED33_15005 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily BED33_15005 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BED33_15010 IPR036144 RibA-like superfamily BED33_15010 IPR000926 GTP cyclohydrolase II, RibA BED33_15010 IPR032677 GTP cyclohydrolase II BED33_15015 IPR036008 Aconitase, iron-sulfur domain BED33_15015 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel BED33_15015 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain BED33_15015 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain BED33_15015 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 BED33_15015 IPR006249 Aconitase/Iron-responsive element-binding protein 2 BED33_15015 IPR018136 Aconitase family, 4Fe-4S cluster binding site BED33_15025 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_15025 IPR000847 Transcription regulator HTH, LysR BED33_15025 IPR005119 LysR, substrate-binding BED33_15025 IPR036390 Winged helix DNA-binding domain superfamily BED33_15030 IPR034149 DNA topoisomerase 1, TOPRIM domain BED33_15030 IPR003601 DNA topoisomerase, type IA, domain 2 BED33_15030 IPR023406 DNA topoisomerase, type IA, active site BED33_15030 IPR013497 DNA topoisomerase, type IA, central BED33_15030 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 BED33_15030 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 BED33_15030 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 BED33_15030 IPR023405 DNA topoisomerase, type IA, core domain BED33_15030 IPR003602 DNA topoisomerase, type IA, DNA-binding domain BED33_15030 IPR005733 DNA topoisomerase I, bacterial-type BED33_15030 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type BED33_15030 IPR006171 TOPRIM domain BED33_15030 IPR013498 DNA topoisomerase, type IA, zn finger BED33_15030 IPR028612 DNA topoisomerase I, type IA BED33_15030 IPR000380 DNA topoisomerase, type IA BED33_15035 IPR019633 Protein of unknown function DUF2498 BED33_15035 IPR038191 YciN superfamily BED33_15040 IPR013703 Peptidase S49, N-terminal proteobacteria BED33_15040 IPR002142 Peptidase S49 BED33_15040 IPR029045 ClpP/crotonase-like domain superfamily BED33_15045 IPR002347 Short-chain dehydrogenase/reductase SDR BED33_15045 IPR020904 Short-chain dehydrogenase/reductase, conserved site BED33_15045 IPR036291 NAD(P)-binding domain superfamily BED33_15050 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_15050 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain BED33_15050 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR BED33_15060 IPR020103 Pseudouridine synthase, catalytic domain superfamily BED33_15060 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site BED33_15060 IPR006145 Pseudouridine synthase, RsuA/RluA BED33_15060 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F BED33_15060 IPR002942 RNA-binding S4 domain BED33_15060 IPR036986 RNA-binding S4 domain superfamily BED33_15065 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily BED33_15065 IPR006070 YrdC-like domain BED33_15070 IPR004013 PHP domain BED33_15070 IPR003141 Polymerase/histidinol phosphatase, N-terminal BED33_15070 IPR016195 Polymerase/histidinol phosphatase-like BED33_15075 IPR005801 ADC synthase BED33_15075 IPR019999 Anthranilate synthase component I-like BED33_15075 IPR006805 Anthranilate synthase component I, N-terminal BED33_15075 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial BED33_15075 IPR015890 Chorismate-utilising enzyme, C-terminal BED33_15080 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain BED33_15080 IPR017926 Glutamine amidotransferase BED33_15080 IPR029062 Class I glutamine amidotransferase-like BED33_15085 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily BED33_15085 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily BED33_15085 IPR000312 Glycosyl transferase, family 3 BED33_15085 IPR005940 Anthranilate phosphoribosyl transferase BED33_15085 IPR017459 Glycosyl transferase family 3, N-terminal domain BED33_15090 IPR011060 Ribulose-phosphate binding barrel BED33_15090 IPR001468 Indole-3-glycerol phosphate synthase, conserved site BED33_15090 IPR013798 Indole-3-glycerol phosphate synthase BED33_15090 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) BED33_15090 IPR013785 Aldolase-type TIM barrel BED33_15095 IPR023026 Tryptophan synthase beta chain/beta chain-like BED33_15095 IPR006653 Tryptophan synthase, beta chain, conserved site BED33_15095 IPR006654 Tryptophan synthase, beta chain BED33_15095 IPR001926 Pyridoxal-phosphate dependent enzyme BED33_15095 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BED33_15100 IPR002028 Tryptophan synthase, alpha chain BED33_15100 IPR018204 Tryptophan synthase, alpha chain, active site BED33_15100 IPR011060 Ribulose-phosphate binding barrel BED33_15100 IPR013785 Aldolase-type TIM barrel BED33_15110 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel BED33_15110 IPR005618 Outer membrane protein, OmpW BED33_15115 IPR005358 Putative zinc- or iron-chelating domain containing protein BED33_15120 IPR009627 Uncharacterised protein family UPF0259 BED33_15130 IPR006008 Intracellular septation protein A BED33_15135 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase BED33_15135 IPR006683 Thioesterase domain BED33_15135 IPR029069 HotDog domain superfamily BED33_15135 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain BED33_15140 IPR006260 TonB/TolA, C-terminal BED33_15140 IPR037682 TonB, C-terminal BED33_15140 IPR003538 Gram-negative bacterial TonB protein BED33_15145 IPR011008 Dimeric alpha-beta barrel BED33_15145 IPR005545 YCII-related BED33_15160 IPR027379 Cardiolipin synthase N-terminal BED33_15160 IPR001736 Phospholipase D/Transphosphatidylase BED33_15160 IPR022924 Cardiolipin synthase BED33_15160 IPR025202 Phospholipase D-like domain BED33_15160 IPR030840 Cardiolipin synthase A BED33_15165 IPR007376 dsDNA mimic, putative BED33_15165 IPR036763 Putative dsDNA mimic superfamily BED33_15170 IPR003593 AAA+ ATPase domain BED33_15170 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_15170 IPR017871 ABC transporter, conserved site BED33_15170 IPR003439 ABC transporter-like BED33_15170 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal BED33_15175 IPR003593 AAA+ ATPase domain BED33_15175 IPR017871 ABC transporter, conserved site BED33_15175 IPR003439 ABC transporter-like BED33_15175 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal BED33_15175 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_15180 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED33_15180 IPR025966 Oligopeptide transport permease C-like, N-terminal domain BED33_15180 IPR035906 MetI-like superfamily BED33_15185 IPR035906 MetI-like superfamily BED33_15185 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED33_15190 IPR030678 Peptide/nickel binding protein, MppA-type BED33_15190 IPR039424 Solute-binding protein family 5 BED33_15190 IPR023765 Solute-binding protein family 5, conserved site BED33_15190 IPR000914 Solute-binding protein family 5 domain BED33_15195 IPR030678 Peptide/nickel binding protein, MppA-type BED33_15195 IPR039424 Solute-binding protein family 5 BED33_15195 IPR023765 Solute-binding protein family 5, conserved site BED33_15195 IPR000914 Solute-binding protein family 5 domain BED33_15200 IPR002771 Multiple antibiotic resistance (MarC)-related BED33_15205 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA BED33_15205 IPR015590 Aldehyde dehydrogenase domain BED33_15205 IPR016162 Aldehyde dehydrogenase, N-terminal BED33_15205 IPR016163 Aldehyde dehydrogenase, C-terminal BED33_15205 IPR016161 Aldehyde/histidinol dehydrogenase BED33_15205 IPR039697 Iron-type alcohol dehydrogenase-like BED33_15205 IPR034789 Bifunctional aldehyde-alcohol dehydrogenase, C-terminal domain BED33_15205 IPR018211 Alcohol dehydrogenase, iron-type, conserved site BED33_15205 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase BED33_15210 IPR020633 Thymidine kinase, conserved site BED33_15210 IPR001267 Thymidine kinase BED33_15210 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_15220 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily BED33_15220 IPR001801 Histone-like protein H-NS BED33_15220 IPR027444 Histone-like protein H-NS, C-terminal domain BED33_15220 IPR027454 Histone-like protein H-NS, N-terminal BED33_15225 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily BED33_15225 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation BED33_15225 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal BED33_15225 IPR017476 UDP-glucose/GDP-mannose dehydrogenase BED33_15225 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type BED33_15225 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BED33_15225 IPR036291 NAD(P)-binding domain superfamily BED33_15225 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal BED33_15230 IPR001789 Signal transduction response regulator, receiver domain BED33_15230 IPR028616 Regulator of RpoS BED33_15230 IPR039420 Transcriptional regulatory protein WalR-like BED33_15230 IPR011006 CheY-like superfamily BED33_15230 IPR036457 PPM-type phosphatase domain superfamily BED33_15235 IPR002641 Patatin-like phospholipase domain BED33_15235 IPR001423 Lysophospholipase patatin, conserved site BED33_15235 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase BED33_15245 IPR023006 Uncharacterised protein family UPF0225 BED33_15245 IPR004027 SEC-C motif BED33_15245 IPR032710 NTF2-like domain superfamily BED33_15250 IPR004810 Formyltetrahydrofolate deformylase BED33_15250 IPR036477 Formyl transferase, N-terminal domain superfamily BED33_15250 IPR002376 Formyl transferase, N-terminal BED33_15250 IPR002912 ACT domain BED33_15250 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain BED33_15265 IPR036390 Winged helix DNA-binding domain superfamily BED33_15265 IPR005119 LysR, substrate-binding BED33_15265 IPR000847 Transcription regulator HTH, LysR BED33_15265 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_15270 IPR005135 Endonuclease/exonuclease/phosphatase BED33_15270 IPR037493 Exodeoxyribonuclease III-like BED33_15270 IPR020848 AP endonuclease 1, conserved site BED33_15270 IPR020847 AP endonuclease 1, binding site BED33_15270 IPR004808 AP endonuclease 1 BED33_15270 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BED33_15275 IPR020476 NUDIX hydrolase BED33_15275 IPR000086 NUDIX hydrolase domain BED33_15275 IPR020084 NUDIX hydrolase, conserved site BED33_15275 IPR015797 NUDIX hydrolase-like domain superfamily BED33_15280 IPR009971 Protein of unknown function DUF1496 BED33_15285 IPR000380 DNA topoisomerase, type IA BED33_15285 IPR023406 DNA topoisomerase, type IA, active site BED33_15285 IPR013497 DNA topoisomerase, type IA, central BED33_15285 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 BED33_15285 IPR006171 TOPRIM domain BED33_15285 IPR003601 DNA topoisomerase, type IA, domain 2 BED33_15285 IPR034144 DNA topoisomerase 3-like, TOPRIM domain BED33_15285 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 BED33_15285 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 BED33_15285 IPR023405 DNA topoisomerase, type IA, core domain BED33_15285 IPR003602 DNA topoisomerase, type IA, DNA-binding domain BED33_15285 IPR005738 DNA topoisomerase III BED33_15290 IPR036921 PurM-like, N-terminal domain superfamily BED33_15290 IPR004536 Selenophosphate synthetase BED33_15290 IPR010918 PurM-like, C-terminal domain BED33_15290 IPR023061 Selenophosphate synthetase, class I BED33_15290 IPR036676 PurM-like, C-terminal domain superfamily BED33_15290 IPR016188 PurM-like, N-terminal domain BED33_15295 IPR000415 Nitroreductase-like BED33_15295 IPR026021 Putative NAD(P)H nitroreductase YdjA-like BED33_15295 IPR029479 Nitroreductase BED33_15300 IPR002142 Peptidase S49 BED33_15300 IPR029045 ClpP/crotonase-like domain superfamily BED33_15300 IPR004634 Peptidase S49, protease IV BED33_15300 IPR033854 Signal peptide peptidase A BED33_15300 IPR004635 Peptidase S49, SppA BED33_15305 IPR027473 L-asparaginase, C-terminal BED33_15305 IPR040919 Asparaginase/glutaminase, C-terminal BED33_15305 IPR027475 Asparaginase/glutaminase, active site 2 BED33_15305 IPR020827 Asparaginase/glutaminase, active site 1 BED33_15305 IPR006034 Asparaginase/glutaminase-like BED33_15305 IPR041725 Type I (cytosolic) L-asparaginase BED33_15305 IPR027474 L-asparaginase, N-terminal BED33_15305 IPR037152 L-asparaginase, N-terminal domain superfamily BED33_15305 IPR036152 Asparaginase/glutaminase-like superfamily BED33_15305 IPR006033 Type I L-asparaginase family BED33_15310 IPR036380 Isochorismatase-like superfamily BED33_15310 IPR000868 Isochorismatase-like BED33_15325 IPR002579 Peptide methionine sulphoxide reductase MrsB BED33_15325 IPR028427 Peptide methionine sulfoxide reductase BED33_15325 IPR011057 Mss4-like superfamily BED33_15330 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site BED33_15330 IPR036291 NAD(P)-binding domain superfamily BED33_15330 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I BED33_15330 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain BED33_15330 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain BED33_15330 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family BED33_15335 IPR011013 Galactose mutarotase-like domain superfamily BED33_15335 IPR025532 Glucose-6-phosphate 1-epimerase BED33_15335 IPR014718 Glycoside hydrolase-type carbohydrate-binding BED33_15335 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase BED33_15340 IPR010583 MltA-interacting MipA BED33_15345 IPR016230 Serine-protein kinase, PrkA BED33_15345 IPR013153 PrkA AAA domain BED33_15345 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_15345 IPR010650 PrkA C-terminal domain BED33_15350 IPR006698 Uncharacterised protein family UPF0229 BED33_15365 IPR005119 LysR, substrate-binding BED33_15365 IPR000847 Transcription regulator HTH, LysR BED33_15365 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_15365 IPR036390 Winged helix DNA-binding domain superfamily BED33_15370 IPR012093 Pirin BED33_15370 IPR003829 Pirin, N-terminal domain BED33_15370 IPR014710 RmlC-like jelly roll fold BED33_15370 IPR011051 RmlC-like cupin domain superfamily BED33_15370 IPR008778 Pirin, C-terminal domain BED33_15375 IPR035919 EAL domain superfamily BED33_15375 IPR000160 GGDEF domain BED33_15375 IPR000700 PAS-associated, C-terminal BED33_15375 IPR000014 PAS domain BED33_15375 IPR001610 PAC motif BED33_15375 IPR029787 Nucleotide cyclase BED33_15375 IPR012226 Diguanylate cyclase/phosphodiesterase BED33_15375 IPR001633 EAL domain BED33_15375 IPR035965 PAS domain superfamily BED33_15385 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site BED33_15385 IPR029066 PLP-binding barrel BED33_15385 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal BED33_15385 IPR000821 Alanine racemase BED33_15385 IPR001608 Alanine racemase, N-terminal BED33_15385 IPR011079 Alanine racemase, C-terminal BED33_15390 IPR036188 FAD/NAD(P)-binding domain superfamily BED33_15390 IPR006076 FAD dependent oxidoreductase BED33_15390 IPR023080 D-amino acid dehydrogenase DadA BED33_15395 IPR007390 Sporulation stage V, protein R BED33_15400 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_15400 IPR028374 FadR, C-terminal domain BED33_15400 IPR014178 Fatty acid response transcription factor FadR BED33_15400 IPR000524 Transcription regulator HTH, GntR BED33_15400 IPR036390 Winged helix DNA-binding domain superfamily BED33_15400 IPR008920 Transcription regulator FadR/GntR, C-terminal BED33_15405 IPR004671 Na+/H+ antiporter NhaB BED33_15410 IPR003752 Disulphide bond formation protein DsbB/BdbC BED33_15410 IPR022920 Disulphide bond formation protein DsbB BED33_15410 IPR023380 DsbB-like superfamily BED33_15430 IPR036822 Copper homeostasis (CutC) domain superfamily BED33_15430 IPR023648 Copper homeostasis CutC domain BED33_15430 IPR005627 Copper homeostasis protein CutC BED33_15435 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BED33_15435 IPR010393 Protein of unknown function DUF991 BED33_15440 IPR008909 DALR anticodon binding BED33_15440 IPR035684 Arginyl-tRNA synthetase, catalytic core domain BED33_15440 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily BED33_15440 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding BED33_15440 IPR005148 Arginyl tRNA synthetase N-terminal domain BED33_15440 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site BED33_15440 IPR001278 Arginine-tRNA ligase BED33_15440 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED33_15450 IPR003714 PhoH-like protein BED33_15450 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_15465 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD BED33_15470 IPR001173 Glycosyltransferase 2-like BED33_15470 IPR029044 Nucleotide-diphospho-sugar transferases BED33_15470 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA BED33_15485 IPR036005 Creatinase/aminopeptidase-like BED33_15485 IPR000994 Peptidase M24 BED33_15485 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal BED33_15495 IPR002318 Alanine-tRNA ligase, class IIc BED33_15495 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria BED33_15495 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain BED33_15495 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal BED33_15495 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily BED33_15495 IPR003156 DHHA1 domain BED33_15495 IPR012947 Threonyl/alanyl tRNA synthetase, SAD BED33_15495 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily BED33_15495 IPR009000 Translation protein, beta-barrel domain superfamily BED33_15505 IPR014431 Tellurite resistance methyltransferase, TehB type-2 BED33_15505 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED33_15505 IPR014710 RmlC-like jelly roll fold BED33_15505 IPR004537 Tellurite resistance methyltransferase, TehB BED33_15505 IPR015392 Domain of unknown function DUF1971 BED33_15505 IPR015985 Tellurite resistance methyltransferase TehB-like domain BED33_15515 IPR036249 Thioredoxin-like superfamily BED33_15515 IPR013766 Thioredoxin domain BED33_15515 IPR023555 Thiol-disulphide oxidoreductase ResA BED33_15515 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant BED33_15520 IPR025857 MacB-like periplasmic core domain BED33_15520 IPR017871 ABC transporter, conserved site BED33_15520 IPR003838 ABC transporter permease protein domain BED33_15520 IPR003593 AAA+ ATPase domain BED33_15520 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_15520 IPR017911 ABC transporter, macrolide export, ATP-binding domain BED33_15520 IPR003439 ABC transporter-like BED33_15530 IPR003439 ABC transporter-like BED33_15530 IPR017871 ABC transporter, conserved site BED33_15530 IPR017911 ABC transporter, macrolide export, ATP-binding domain BED33_15530 IPR025857 MacB-like periplasmic core domain BED33_15530 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_15530 IPR003593 AAA+ ATPase domain BED33_15530 IPR003838 ABC transporter permease protein domain BED33_15540 IPR018470 Periplasmic metal-binding protein Tp34-type BED33_15540 IPR038482 Periplasmic metal-binding protein tp34-type superfamily BED33_15545 IPR004923 Iron permease FTR1/Fip1/EfeU BED33_15560 IPR015868 Glutaminase BED33_15560 IPR012338 Beta-lactamase/transpeptidase-like BED33_15565 IPR026040 Hydroxypyruvate isomerase-like BED33_15565 IPR013022 Xylose isomerase-like, TIM barrel domain BED33_15565 IPR036237 Xylose isomerase-like superfamily BED33_15570 IPR001303 Class II aldolase/adducin N-terminal BED33_15570 IPR036409 Class II aldolase/adducin N-terminal domain superfamily BED33_15575 IPR010737 Four-carbon acid sugar kinase, N-terminal domain BED33_15575 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily BED33_15575 IPR031475 Nucleotide-binding C-terminal domain BED33_15575 IPR042213 Nucleotide-binding, C-terminal domain superfamily BED33_15580 IPR014036 DeoR C-terminal sensor domain BED33_15580 IPR001034 DeoR-type HTH domain BED33_15580 IPR037171 NagB/RpiA transferase-like BED33_15580 IPR018356 Transcription regulator, HTH DeoR-type, conserved site BED33_15580 IPR036390 Winged helix DNA-binding domain superfamily BED33_15580 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_15585 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BED33_15585 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB BED33_15585 IPR039506 SpoOB, alpha-helical domain BED33_15585 IPR029151 Periplasmic sensor-like domain superfamily BED33_15585 IPR003594 Histidine kinase/HSP90-like ATPase BED33_15585 IPR033463 Single cache domain 3 BED33_15585 IPR013767 PAS fold BED33_15585 IPR035965 PAS domain superfamily BED33_15585 IPR000014 PAS domain BED33_15585 IPR005467 Histidine kinase domain BED33_15585 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BED33_15590 IPR024187 Signal transduction response regulator, citrate/malate metabolism BED33_15590 IPR011006 CheY-like superfamily BED33_15590 IPR001789 Signal transduction response regulator, receiver domain BED33_15595 IPR004679 2-hydroxycarboxylate transporter BED33_15595 IPR018025 2-hydroxycarboxylate transporter, Proteobacteria/Firmicutes BED33_15600 IPR004840 Amino acid permease, conserved site BED33_15600 IPR004841 Amino acid permease/ SLC12A domain BED33_15615 IPR036259 MFS transporter superfamily BED33_15615 IPR020846 Major facilitator superfamily domain BED33_15615 IPR011701 Major facilitator superfamily BED33_15620 IPR036412 HAD-like superfamily BED33_15620 IPR023214 HAD superfamily BED33_15620 IPR006379 HAD-superfamily hydrolase, subfamily IIB BED33_15620 IPR000150 Cof family BED33_15630 IPR001207 Transposase, mutator type BED33_15635 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED33_15635 IPR016584 Methyltransferase VrtF-like BED33_15635 IPR013217 Methyltransferase type 12 BED33_15640 IPR001207 Transposase, mutator type BED33_15685 IPR011931 Tyrosine recombinase XerC BED33_15685 IPR004107 Integrase, SAM-like, N-terminal BED33_15685 IPR023009 Tyrosine recombinase XerC/XerD BED33_15685 IPR011010 DNA breaking-rejoining enzyme, catalytic core BED33_15685 IPR013762 Integrase-like, catalytic domain superfamily BED33_15685 IPR002104 Integrase, catalytic domain BED33_15685 IPR010998 Integrase/recombinase, N-terminal BED33_15690 IPR019648 Protein of unknown function DUF2511 BED33_15695 IPR008457 Copper resistance protein D BED33_15695 IPR032694 Copper transport protein C/D BED33_15700 IPR014756 Immunoglobulin E-set BED33_15700 IPR032694 Copper transport protein C/D BED33_15700 IPR007348 CopC domain BED33_15705 IPR012347 Ferritin-like BED33_15705 IPR001519 Ferritin BED33_15705 IPR009078 Ferritin-like superfamily BED33_15705 IPR041719 Ferritin, prokaryotic-type BED33_15705 IPR008331 Ferritin/DPS protein domain BED33_15705 IPR009040 Ferritin-like diiron domain BED33_15710 IPR009052 DNA polymerase III-theta, bacterial BED33_15710 IPR036745 DNA polymerase III-theta superfamily BED33_15715 IPR002410 Peptidase S33 BED33_15715 IPR029058 Alpha/Beta hydrolase fold BED33_15715 IPR005944 Proline iminopeptidase BED33_15715 IPR000073 Alpha/beta hydrolase fold-1 BED33_15720 IPR012337 Ribonuclease H-like superfamily BED33_15720 IPR036397 Ribonuclease H superfamily BED33_15720 IPR013520 Exonuclease, RNase T/DNA polymerase III BED33_15725 IPR029058 Alpha/Beta hydrolase fold BED33_15725 IPR002471 Peptidase S9, serine active site BED33_15725 IPR023302 Peptidase S9A, N-terminal domain BED33_15725 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain BED33_15725 IPR002470 Peptidase S9A, prolyl oligopeptidase BED33_15730 IPR025603 YebF/Colicin-M immunity protein BED33_15730 IPR020236 Uncharacterised protein family YebF BED33_15730 IPR038703 YebF/Cmi superfamily BED33_15740 IPR009813 Uncharacterised protein family YebG BED33_15740 IPR038627 YebG-like superfamily BED33_15745 IPR001650 Helicase, C-terminal BED33_15745 IPR014001 Helicase superfamily 1/2, ATP-binding domain BED33_15745 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily BED33_15745 IPR028619 ATP-dependent RNA helicase DbpA BED33_15745 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_15745 IPR011545 DEAD/DEAH box helicase domain BED33_15745 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site BED33_15745 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain BED33_15745 IPR014014 RNA helicase, DEAD-box type, Q motif BED33_15750 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase BED33_15750 IPR011054 Rudiment single hybrid motif BED33_15750 IPR011761 ATP-grasp fold BED33_15750 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type BED33_15750 IPR013815 ATP-grasp fold, subdomain 1 BED33_15750 IPR016185 Pre-ATP-grasp domain superfamily BED33_15755 IPR005371 Uncharacterised protein family UPF0181 BED33_15760 IPR015890 Chorismate-utilising enzyme, C-terminal BED33_15760 IPR005802 Aminodeoxychorismate synthase, component I BED33_15760 IPR005801 ADC synthase BED33_15760 IPR019999 Anthranilate synthase component I-like BED33_15760 IPR006805 Anthranilate synthase component I, N-terminal BED33_15765 IPR000086 NUDIX hydrolase domain BED33_15765 IPR000059 NUDIX hydrolase, NudL, conserved site BED33_15765 IPR015797 NUDIX hydrolase-like domain superfamily BED33_15765 IPR023735 Uncharacterised nudix hydrolase NudL BED33_15770 IPR029009 Allosteric substrate binding domain superfamily BED33_15770 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form BED33_15770 IPR005130 Serine dehydratase-like, alpha subunit BED33_15770 IPR005131 Serine dehydratase beta chain BED33_15775 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED33_15775 IPR003346 Transposase, IS116/IS110/IS902 BED33_15780 IPR036318 FAD-binding, type PCMH-like superfamily BED33_15780 IPR000644 CBS domain BED33_15780 IPR016169 FAD-binding, type PCMH, subdomain 2 BED33_15780 IPR005170 Transporter-associated domain BED33_15780 IPR005496 Integral membrane protein TerC BED33_15785 IPR004720 Phosphotransferase system, sorbose subfamily IIB component BED33_15785 IPR013789 Phosphotransferase system, mannose family IIA component BED33_15785 IPR033887 PTS system mannose/sorbose specific IIA subunit BED33_15785 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily BED33_15785 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup BED33_15785 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily BED33_15785 IPR004701 Phosphotransferase system, mannose-type IIA component BED33_15790 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit BED33_15795 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component BED33_15800 IPR009328 Protein of unknown function DUF986 BED33_15805 IPR022929 Putative manganese efflux pump MntP BED33_15805 IPR003810 Putative manganese efflux pump BED33_15810 IPR010917 TonB-dependent receptor, conserved site BED33_15810 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BED33_15810 IPR000531 TonB-dependent receptor-like, beta-barrel BED33_15810 IPR010105 TonB-dependent siderophore receptor BED33_15810 IPR012910 TonB-dependent receptor, plug domain BED33_15810 IPR010916 TonB box, conserved site BED33_15810 IPR039423 TonB-dependent receptor-like BED33_15810 IPR037066 TonB-dependent receptor, plug domain superfamily BED33_15810 IPR030149 TonB-dependent siderophore receptor FcuA/FatA BED33_15815 IPR007895 MASE1 BED33_15815 IPR029787 Nucleotide cyclase BED33_15815 IPR000160 GGDEF domain BED33_15815 IPR001610 PAC motif BED33_15815 IPR035919 EAL domain superfamily BED33_15815 IPR001633 EAL domain BED33_15815 IPR013655 PAS fold-3 BED33_15815 IPR000014 PAS domain BED33_15815 IPR000700 PAS-associated, C-terminal BED33_15815 IPR013656 PAS fold-4 BED33_15815 IPR035965 PAS domain superfamily BED33_15825 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted BED33_15825 IPR025714 Methyltransferase domain BED33_15825 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED33_15830 IPR005311 Penicillin-binding protein, dimerisation domain BED33_15830 IPR012338 Beta-lactamase/transpeptidase-like BED33_15830 IPR001460 Penicillin-binding protein, transpeptidase BED33_15830 IPR036138 Penicillin-binding protein, dimerisation domain superfamily BED33_15830 IPR037532 Peptidoglycan D,D-transpeptidase FtsI BED33_15840 IPR012156 Cold shock, CspA BED33_15840 IPR019844 Cold-shock (CSD) domain BED33_15840 IPR012340 Nucleic acid-binding, OB-fold BED33_15840 IPR011129 Cold shock domain BED33_15840 IPR002059 Cold-shock protein, DNA-binding BED33_15845 IPR019672 Protein of unknown function DUF2627 BED33_15850 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP BED33_15850 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel BED33_15870 IPR025594 YebO-like protein BED33_15875 IPR025611 YobH-like protein BED33_15880 IPR020262 Uncharacterised protein family YecJ BED33_15885 IPR020449 Transcription regulator HTH, AraC- type BED33_15885 IPR018062 HTH domain AraC-type, conserved site BED33_15885 IPR018060 DNA binding HTH domain, AraC-type BED33_15885 IPR009057 Homeobox-like domain superfamily BED33_15895 IPR002293 Amino acid/polyamine transporter I BED33_15895 IPR004754 Amino acid antiporter BED33_15895 IPR022461 Arginine/ornithine antiporter BED33_15905 IPR003593 AAA+ ATPase domain BED33_15905 IPR017871 ABC transporter, conserved site BED33_15905 IPR003439 ABC transporter-like BED33_15905 IPR036640 ABC transporter type 1, transmembrane domain superfamily BED33_15905 IPR011527 ABC transporter type 1, transmembrane domain BED33_15905 IPR039421 Type I protein exporter BED33_15905 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_15915 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BED33_15915 IPR003539 Cytolethal distending toxin B BED33_15915 IPR005135 Endonuclease/exonuclease/phosphatase BED33_15925 IPR029016 GAF-like domain superfamily BED33_15925 IPR013515 Phytochrome, central region BED33_15925 IPR001633 EAL domain BED33_15925 IPR016132 Phytochrome chromophore attachment domain BED33_15925 IPR035919 EAL domain superfamily BED33_15925 IPR029787 Nucleotide cyclase BED33_15925 IPR003018 GAF domain BED33_15925 IPR000160 GGDEF domain BED33_15925 IPR001294 Phytochrome BED33_15935 IPR010486 HNS-dependent expression A/B BED33_15935 IPR038303 HNS-dependent expression A/B superfamily BED33_15935 IPR028623 HNS-dependent expression B BED33_15940 IPR009739 Lysozyme inhibitor LprI, N-terminal BED33_15965 IPR002577 Helix-turn-helix, HxlR type BED33_15965 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_15965 IPR036390 Winged helix DNA-binding domain superfamily BED33_15970 IPR036291 NAD(P)-binding domain superfamily BED33_15970 IPR008030 NmrA-like domain BED33_15975 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED33_15975 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme BED33_15975 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase BED33_15975 IPR015424 Pyridoxal phosphate-dependent transferase BED33_15975 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED33_15985 IPR006197 Peptidase S24, LexA-like BED33_15985 IPR015927 Peptidase S24/S26A/S26B/S26C BED33_15985 IPR039418 LexA-like BED33_15985 IPR036286 LexA/Signal peptidase-like superfamily BED33_15990 IPR025188 Domain of unknown function DUF4113 BED33_15990 IPR001126 UmuC domain BED33_15990 IPR036775 DNA polymerase, Y-family, little finger domain superfamily BED33_15990 IPR017961 DNA polymerase, Y-family, little finger domain BED33_15995 IPR000014 PAS domain BED33_15995 IPR004090 Chemotaxis methyl-accepting receptor BED33_15995 IPR013655 PAS fold-3 BED33_15995 IPR035965 PAS domain superfamily BED33_15995 IPR003660 HAMP domain BED33_15995 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BED33_15995 IPR001610 PAC motif BED33_16005 IPR000843 LacI-type HTH domain BED33_16005 IPR028082 Periplasmic binding protein-like I BED33_16005 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BED33_16005 IPR001761 Periplasmic binding protein/LacI sugar binding domain BED33_16010 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily BED33_16010 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily BED33_16010 IPR013189 Glycosyl hydrolase family 32, C-terminal BED33_16010 IPR013148 Glycosyl hydrolase family 32, N-terminal BED33_16010 IPR006232 Sucrose-6-phosphate hydrolase BED33_16010 IPR018053 Glycoside hydrolase, family 32, active site BED33_16010 IPR001362 Glycoside hydrolase, family 32 BED33_16015 IPR000576 LacY/RafB permease family BED33_16015 IPR020846 Major facilitator superfamily domain BED33_16015 IPR036259 MFS transporter superfamily BED33_16015 IPR018457 LacY/RafB permease family, conserved site BED33_16030 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic BED33_16030 IPR024084 Isopropylmalate dehydrogenase-like domain BED33_16030 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site BED33_16060 IPR024084 Isopropylmalate dehydrogenase-like domain BED33_16060 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site BED33_16060 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic BED33_16065 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site BED33_16065 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain BED33_16065 IPR006145 Pseudouridine synthase, RsuA/RluA BED33_16065 IPR020103 Pseudouridine synthase, catalytic domain superfamily BED33_16065 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F BED33_16070 IPR000086 NUDIX hydrolase domain BED33_16070 IPR020084 NUDIX hydrolase, conserved site BED33_16070 IPR033713 Phosphatase NudJ BED33_16070 IPR015797 NUDIX hydrolase-like domain superfamily BED33_16070 IPR020476 NUDIX hydrolase BED33_16075 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED33_16075 IPR023382 Adenine nucleotide alpha hydrolase-like domains BED33_16075 IPR004506 tRNA-specific 2-thiouridylase BED33_16080 IPR007451 High frequency lysogenization protein HflD BED33_16080 IPR035932 HflD-like superfamily BED33_16085 IPR013539 Adenylosuccinate lyase PurB, C-terminal BED33_16085 IPR004769 Adenylosuccinate lyase BED33_16085 IPR008948 L-Aspartase-like BED33_16085 IPR022761 Fumarate lyase, N-terminal BED33_16085 IPR000362 Fumarate lyase family BED33_16085 IPR020557 Fumarate lyase, conserved site BED33_16085 IPR024083 Fumarase/histidase, N-terminal BED33_16095 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_16095 IPR039420 Transcriptional regulatory protein WalR-like BED33_16095 IPR001789 Signal transduction response regulator, receiver domain BED33_16095 IPR011006 CheY-like superfamily BED33_16095 IPR001867 OmpR/PhoB-type DNA-binding domain BED33_16100 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BED33_16100 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BED33_16100 IPR038429 PhoQ Sensor superfamily BED33_16100 IPR015014 PhoQ Sensor BED33_16100 IPR005467 Histidine kinase domain BED33_16100 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BED33_16100 IPR003594 Histidine kinase/HSP90-like ATPase BED33_16100 IPR003660 HAMP domain BED33_16110 IPR002933 Peptidase M20 BED33_16110 IPR036264 Bacterial exopeptidase dimerisation domain BED33_16110 IPR010161 Peptidase M20B, tripeptide aminopeptidase BED33_16110 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site BED33_16110 IPR011650 Peptidase M20, dimerisation domain BED33_16115 IPR026591 Sirtuin, catalytic core small domain superfamily BED33_16115 IPR027546 Sirtuin, class III BED33_16115 IPR029035 DHS-like NAD/FAD-binding domain superfamily BED33_16115 IPR003000 Sirtuin family BED33_16115 IPR026590 Sirtuin family, catalytic core domain BED33_16125 IPR003838 ABC transporter permease protein domain BED33_16125 IPR025857 MacB-like periplasmic core domain BED33_16125 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E BED33_16125 IPR011926 Lipoprotein-releasing system transmembrane protein LolE, gammaproteobacteria type BED33_16130 IPR017871 ABC transporter, conserved site BED33_16130 IPR015854 ABC transporter, lipoprotein release, LolD BED33_16130 IPR003439 ABC transporter-like BED33_16130 IPR003593 AAA+ ATPase domain BED33_16130 IPR011924 Lipoprotein releasing system, ATP-binding protein BED33_16130 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_16135 IPR003838 ABC transporter permease protein domain BED33_16135 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E BED33_16135 IPR025857 MacB-like periplasmic core domain BED33_16140 IPR036101 CarD-like/TRCF domain superfamily BED33_16140 IPR005118 Transcription-repair-coupling factor, C-terminal domain BED33_16140 IPR003711 CarD-like/TRCF domain BED33_16140 IPR011545 DEAD/DEAH box helicase domain BED33_16140 IPR014001 Helicase superfamily 1/2, ATP-binding domain BED33_16140 IPR001650 Helicase, C-terminal BED33_16140 IPR004576 Transcription-repair coupling factor BED33_16140 IPR041471 UvrB, interaction domain BED33_16140 IPR037235 TRCF-like, C-terminal domain BED33_16140 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_16145 IPR008816 Glycine zipper 2TM domain BED33_16150 IPR036188 FAD/NAD(P)-binding domain superfamily BED33_16150 IPR023753 FAD/NAD(P)-binding domain BED33_16155 IPR029058 Alpha/Beta hydrolase fold BED33_16155 IPR022987 Uncharacterised protein family UPF0227 BED33_16155 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA BED33_16160 IPR017853 Glycoside hydrolase superfamily BED33_16160 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily BED33_16160 IPR022956 Beta-hexosaminidase, bacterial BED33_16160 IPR001764 Glycoside hydrolase, family 3, N-terminal BED33_16160 IPR019800 Glycoside hydrolase, family 3, active site BED33_16165 IPR002575 Aminoglycoside phosphotransferase BED33_16165 IPR011009 Protein kinase-like domain superfamily BED33_16165 IPR014093 Thiamine kinase BED33_16170 IPR012640 Membrane lipoprotein, lipid attachment site BED33_16170 IPR014094 Penicillin-binding protein activator LpoB BED33_16175 IPR038483 YcfL-like superfamily BED33_16175 IPR010824 Protein of unknown function DUF1425 BED33_16180 IPR019808 Histidine triad, conserved site BED33_16180 IPR001310 Histidine triad (HIT) protein BED33_16180 IPR011146 HIT-like domain BED33_16180 IPR036265 HIT-like superfamily BED33_16185 IPR036291 NAD(P)-binding domain superfamily BED33_16185 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal BED33_16190 IPR023767 Transcriptional regulator SgrR BED33_16190 IPR036390 Winged helix DNA-binding domain superfamily BED33_16190 IPR000914 Solute-binding protein family 5 domain BED33_16190 IPR039424 Solute-binding protein family 5 BED33_16190 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain BED33_16195 IPR007197 Radical SAM BED33_16195 IPR013785 Aldolase-type TIM barrel BED33_16195 IPR034491 Anaerobic Ser-type sulfatase-maturating enzyme BED33_16195 IPR023885 4Fe4S-binding SPASM domain BED33_16205 IPR039421 Type I protein exporter BED33_16205 IPR003593 AAA+ ATPase domain BED33_16205 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_16205 IPR033838 Colicin V processing peptidase BED33_16205 IPR036640 ABC transporter type 1, transmembrane domain superfamily BED33_16205 IPR005074 Peptidase C39, bacteriocin processing BED33_16205 IPR003439 ABC transporter-like BED33_16205 IPR017871 ABC transporter, conserved site BED33_16205 IPR011527 ABC transporter type 1, transmembrane domain BED33_16215 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component BED33_16215 IPR036878 Glucose permease domain IIB BED33_16215 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site BED33_16215 IPR003352 Phosphotransferase system, EIIC BED33_16215 IPR013013 Phosphotransferase system, EIIC component, type 1 BED33_16215 IPR001996 Phosphotransferase system, IIB component, type 1 BED33_16215 IPR011299 PTS system glucose-specific IIBC component BED33_16220 IPR001130 TatD family BED33_16220 IPR015991 Uncharacterised hydrolase TatD-type BED33_16220 IPR018228 Deoxyribonuclease, TatD-related, conserved site BED33_16220 IPR032466 Metal-dependent hydrolase BED33_16225 IPR015199 DNA polymerase III, delta subunit, C-terminal BED33_16225 IPR004622 DNA polymerase III, delta prime subunit BED33_16225 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal BED33_16225 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_16230 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_16230 IPR039430 Thymidylate kinase-like domain BED33_16230 IPR018094 Thymidylate kinase BED33_16230 IPR018095 Thymidylate kinase, conserved site BED33_16235 IPR003770 Endolytic murein transglycosylase BED33_16240 IPR018300 Aminotransferase, class IV, conserved site BED33_16240 IPR036038 Aminotransferase-like, PLP-dependent enzymes BED33_16240 IPR001544 Aminotransferase class IV BED33_16240 IPR017824 Aminodeoxychorismate lyase, class IV BED33_16245 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 BED33_16245 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BED33_16245 IPR000794 Beta-ketoacyl synthase BED33_16245 IPR016039 Thiolase-like BED33_16245 IPR018201 Beta-ketoacyl synthase, active site BED33_16245 IPR014031 Beta-ketoacyl synthase, C-terminal BED33_16245 IPR014030 Beta-ketoacyl synthase, N-terminal BED33_16250 IPR009081 Phosphopantetheine binding ACP domain BED33_16250 IPR003231 Acyl carrier protein (ACP) BED33_16250 IPR036736 ACP-like superfamily BED33_16250 IPR006162 Phosphopantetheine attachment site BED33_16255 IPR002347 Short-chain dehydrogenase/reductase SDR BED33_16255 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase BED33_16255 IPR020904 Short-chain dehydrogenase/reductase, conserved site BED33_16255 IPR036291 NAD(P)-binding domain superfamily BED33_16260 IPR014043 Acyl transferase BED33_16260 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type BED33_16260 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase BED33_16260 IPR024925 Malonyl CoA-acyl carrier protein transacylase BED33_16260 IPR001227 Acyl transferase domain superfamily BED33_16260 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding BED33_16265 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BED33_16265 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 BED33_16265 IPR016039 Thiolase-like BED33_16265 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal BED33_16270 IPR003664 Fatty acid synthesis PlsX protein BED33_16270 IPR012281 Phospholipid biosynthesis protein, PlsX-like BED33_16275 IPR002677 Ribosomal protein L32p BED33_16275 IPR011332 Zinc-binding ribosomal protein BED33_16280 IPR039255 Large ribosomal RNA subunit accumulation protein YceD, bacteria BED33_16280 IPR003772 Large ribosomal RNA subunit accumulation protein YceD BED33_16285 IPR029001 Inosine triphosphate pyrophosphatase-like BED33_16285 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein BED33_16290 IPR006145 Pseudouridine synthase, RsuA/RluA BED33_16290 IPR020103 Pseudouridine synthase, catalytic domain superfamily BED33_16290 IPR036986 RNA-binding S4 domain superfamily BED33_16290 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site BED33_16290 IPR006225 Pseudouridine synthase, RluC/RluD BED33_16290 IPR002942 RNA-binding S4 domain BED33_16295 IPR004659 Ribonuclease E/G BED33_16295 IPR012340 Nucleic acid-binding, OB-fold BED33_16295 IPR021968 Polyribonucleotide phosphorylase C-terminal BED33_16295 IPR022967 RNA-binding domain, S1 BED33_16295 IPR003029 S1 domain BED33_16295 IPR028878 Ribonuclease E BED33_16295 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G BED33_16300 IPR011008 Dimeric alpha-beta barrel BED33_16300 IPR007138 Antibiotic biosynthesis monooxygenase domain BED33_16305 IPR006680 Amidohydrolase-related BED33_16305 IPR004721 Dihydroorotase homodimeric type BED33_16305 IPR002195 Dihydroorotase, conserved site BED33_16305 IPR032466 Metal-dependent hydrolase BED33_16310 IPR010391 DNA damage-inducible protein DinI-like BED33_16310 IPR036687 DinI-like superfamily BED33_16315 IPR025730 Biofilm regulator BssS BED33_16320 IPR036188 FAD/NAD(P)-binding domain superfamily BED33_16320 IPR006076 FAD dependent oxidoreductase BED33_16320 IPR023493 N-methyl-L-tryptophan oxidase MTOX BED33_16325 IPR001789 Signal transduction response regulator, receiver domain BED33_16325 IPR000792 Transcription regulator LuxR, C-terminal BED33_16325 IPR016032 Signal transduction response regulator, C-terminal effector BED33_16330 IPR002549 Transmembrane protein TqsA-like BED33_16345 IPR005614 NrfD family BED33_16350 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BED33_16350 IPR006311 Twin-arginine translocation pathway, signal sequence BED33_16350 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BED33_16360 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_16360 IPR011006 CheY-like superfamily BED33_16360 IPR001789 Signal transduction response regulator, receiver domain BED33_16360 IPR000792 Transcription regulator LuxR, C-terminal BED33_16365 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase BED33_16365 IPR004960 Bacterial lipid A biosynthesis acyltransferase BED33_16370 IPR041508 Toxin complex C-like repeat BED33_16370 IPR011324 Cytotoxic necrotizing factor-like, catalytic BED33_16370 IPR037040 Cytotoxic necrotizing factor, Rho-activating domain superfamily BED33_16370 IPR022385 Rhs repeat-associated core BED33_16370 IPR008430 Cytotoxic necrotizing factor, Rho-activating domain BED33_16375 IPR032808 DoxX family BED33_16385 IPR036259 MFS transporter superfamily BED33_16385 IPR020846 Major facilitator superfamily domain BED33_16385 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG BED33_16385 IPR023692 Multidrug resistance protein MdtG BED33_16385 IPR011701 Major facilitator superfamily BED33_16390 IPR000109 Proton-dependent oligopeptide transporter family BED33_16390 IPR020846 Major facilitator superfamily domain BED33_16390 IPR036259 MFS transporter superfamily BED33_16390 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site BED33_16390 IPR005279 Dipeptide/tripeptide permease BED33_16395 IPR029044 Nucleotide-diphospho-sugar transferases BED33_16395 IPR001173 Glycosyltransferase 2-like BED33_16395 IPR023725 Glucan biosynthesis glucosyltransferase H BED33_16400 IPR014756 Immunoglobulin E-set BED33_16400 IPR014438 Glucan biosynthesis protein MdoG/MdoD BED33_16400 IPR013783 Immunoglobulin-like fold BED33_16400 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal BED33_16400 IPR014718 Glycoside hydrolase-type carbohydrate-binding BED33_16400 IPR011013 Galactose mutarotase-like domain superfamily BED33_16400 IPR023704 Glucan biosynthesis protein G BED33_16405 IPR023723 Glucan biosynthesis protein C BED33_16405 IPR002656 Acyltransferase 3 BED33_16415 IPR003346 Transposase, IS116/IS110/IS902 BED33_16415 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED33_16420 IPR036318 FAD-binding, type PCMH-like superfamily BED33_16420 IPR023729 K(+)/H(+) antiporter NhaP2 BED33_16420 IPR006153 Cation/H+ exchanger BED33_16420 IPR006037 Regulator of K+ conductance, C-terminal BED33_16420 IPR030151 K(+)/H(+) antiporter NhaP BED33_16420 IPR038770 Sodium/solute symporter superfamily BED33_16420 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily BED33_16420 IPR016169 FAD-binding, type PCMH, subdomain 2 BED33_16420 IPR005170 Transporter-associated domain BED33_16430 IPR016181 Acyl-CoA N-acyltransferase BED33_16430 IPR018311 Autoinducer synthesis, conserved site BED33_16430 IPR001690 Autoinducer synthase BED33_16435 IPR000792 Transcription regulator LuxR, C-terminal BED33_16435 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain BED33_16435 IPR016032 Signal transduction response regulator, C-terminal effector BED33_16435 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_16435 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily BED33_16440 IPR013026 Tetratricopeptide repeat-containing domain BED33_16440 IPR011990 Tetratricopeptide-like helical domain superfamily BED33_16440 IPR019734 Tetratricopeptide repeat BED33_16450 IPR013766 Thioredoxin domain BED33_16450 IPR036249 Thioredoxin-like superfamily BED33_16450 IPR017937 Thioredoxin, conserved site BED33_16450 IPR013740 Redoxin BED33_16450 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE BED33_16460 IPR017566 NrfD BED33_16460 IPR005614 NrfD family BED33_16465 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BED33_16465 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BED33_16465 IPR017567 Cytochrome c nitrite reductase, Fe-S protein BED33_16465 IPR006311 Twin-arginine translocation pathway, signal sequence BED33_16465 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal BED33_16470 IPR010177 Doubled CXXCH motif BED33_16470 IPR036280 Multiheme cytochrome superfamily BED33_16470 IPR011031 Multihaem cytochrome BED33_16470 IPR017564 Cytochrome c nitrite reductase, pentahaem subunit BED33_16470 IPR023155 Cytochrome c-552/4 BED33_16475 IPR003321 Cytochrome c552 BED33_16475 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit BED33_16475 IPR036280 Multiheme cytochrome superfamily BED33_16475 IPR011031 Multihaem cytochrome BED33_16485 IPR007453 Sulphur transfer protein DsrC/TusE BED33_16485 IPR042072 DsrC-like protein, C-terminal domain BED33_16485 IPR025526 DsrC-like domain superfamily BED33_16490 IPR020456 Acylphosphatase BED33_16490 IPR001792 Acylphosphatase-like domain BED33_16490 IPR036046 Acylphosphatase-like domain superfamily BED33_16490 IPR028627 Acylphosphatase, bacteria BED33_16490 IPR017968 Acylphosphatase, conserved site BED33_16505 IPR015947 PUA-like superfamily BED33_16505 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED33_16505 IPR002478 PUA domain BED33_16505 IPR023542 rRNA large subunit methyltransferase I BED33_16505 IPR019614 S-adenosylmethionine-dependent methyltransferase BED33_16505 IPR036974 PUA domain superfamily BED33_16505 IPR041532 RlmI, PUA-like domain BED33_16510 IPR011722 Hemimethylated DNA-binding domain BED33_16510 IPR036623 Hemimethylated DNA-binding domain superfamily BED33_16510 IPR022866 Heat shock protein HspQ BED33_16515 IPR003781 CoA-binding BED33_16515 IPR036291 NAD(P)-binding domain superfamily BED33_16520 IPR018635 Uncharacterised protein family UPF0319 BED33_16525 IPR036914 Methylglyoxal synthase-like domain superfamily BED33_16525 IPR011607 Methylglyoxal synthase-like domain BED33_16525 IPR018148 Methylglyoxal synthase, active site BED33_16525 IPR004363 Methylglyoxal synthase BED33_16530 IPR034739 UvrD/AddA helicase, N-terminal BED33_16530 IPR014016 UvrD-like helicase, ATP-binding domain BED33_16530 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_16530 IPR022161 DNA helicase IV, N-terminal domain BED33_16530 IPR000212 DNA helicase, UvrD/REP type BED33_16530 IPR014017 UvrD-like DNA helicase, C-terminal BED33_16535 IPR031308 Uncharacterised conserved protein UCP028777 BED33_16535 IPR005185 Inner membrane component domain BED33_16540 IPR032692 Integral membrane protein YccS, N-terminal BED33_16540 IPR010020 Integral membrane protein, YccS/YhfK BED33_16540 IPR010019 Integral membrane protein, YccS BED33_16545 IPR007077 TfoX, C-terminal BED33_16545 IPR026256 Transcriptional regulator, TfoX/Sxy-type BED33_16545 IPR007076 TfoX, N-terminal BED33_16555 IPR036737 OmpA-like domain superfamily BED33_16555 IPR006665 OmpA-like domain BED33_16555 IPR002368 Outer membrane protein, OmpA BED33_16555 IPR006664 Outer membrane protein, bacterial BED33_16555 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel BED33_16555 IPR000498 Outer membrane protein OmpA-like, transmembrane domain BED33_16555 IPR006690 Outer membrane protein, OmpA-like, conserved site BED33_16560 IPR035087 MatP, N-terminal BED33_16560 IPR035375 MatP, C-terminal ribbon-helix-helix domain BED33_16560 IPR009390 Macrodomain Ter protein, MatP BED33_16560 IPR038339 MatP, N-terminal domain superfamily BED33_16560 IPR013321 Arc-type ribbon-helix-helix BED33_16565 IPR008269 Peptidase S16, Lon proteolytic domain BED33_16565 IPR027065 Lon protease BED33_16565 IPR020568 Ribosomal protein S5 domain 2-type fold BED33_16565 IPR041699 Lon protease, AAA domain BED33_16565 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BED33_16570 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA BED33_16570 IPR029069 HotDog domain superfamily BED33_16570 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ BED33_16580 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BED33_16580 IPR016039 Thiolase-like BED33_16580 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 BED33_16580 IPR000794 Beta-ketoacyl synthase BED33_16580 IPR014030 Beta-ketoacyl synthase, N-terminal BED33_16580 IPR014031 Beta-ketoacyl synthase, C-terminal BED33_16580 IPR018201 Beta-ketoacyl synthase, active site BED33_16585 IPR005586 ABC-type transport auxiliary lipoprotein component BED33_16590 IPR003399 Mce/MlaD BED33_16595 IPR007498 Intermembrane transport protein PqiA-like BED33_16595 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type BED33_16600 IPR032781 ABC-transporter extension domain BED33_16600 IPR032524 ABC transporter Uup, C-terminal BED33_16600 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily BED33_16600 IPR017871 ABC transporter, conserved site BED33_16600 IPR003439 ABC transporter-like BED33_16600 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_16600 IPR003593 AAA+ ATPase domain BED33_16605 IPR002052 DNA methylase, N-6 adenine-specific, conserved site BED33_16605 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED33_16605 IPR017244 Ribosomal RNA large subunit methyltransferase K/L BED33_16605 IPR000241 Putative RNA methylase domain BED33_16605 IPR019614 S-adenosylmethionine-dependent methyltransferase BED33_16605 IPR004114 THUMP domain BED33_16610 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site BED33_16610 IPR012675 Beta-grasp domain superfamily BED33_16610 IPR005302 Molybdenum cofactor sulfurase, C-terminal BED33_16610 IPR005303 MOSC, N-terminal beta barrel BED33_16610 IPR011037 Pyruvate kinase-like, insert domain superfamily BED33_16610 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain BED33_16610 IPR036010 2Fe-2S ferredoxin-like superfamily BED33_16615 IPR009809 Cell division protein ZapC BED33_16620 IPR005720 Dihydroorotate dehydrogenase domain BED33_16620 IPR001295 Dihydroorotate dehydrogenase, conserved site BED33_16620 IPR005719 Dihydroorotate dehydrogenase, class 2 BED33_16620 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 BED33_16620 IPR013785 Aldolase-type TIM barrel BED33_16625 IPR012779 Peptidase M1, alanyl aminopeptidase BED33_16625 IPR014782 Peptidase M1, membrane alanine aminopeptidase BED33_16625 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase BED33_16625 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily BED33_16625 IPR042097 Aminopeptidase N-like , N-terminal BED33_16625 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily BED33_16625 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal BED33_16625 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold BED33_16625 IPR027268 Peptidase M4/M1, CTD superfamily BED33_16630 IPR006406 Nicotinate phosphoribosyltransferase BED33_16630 IPR007229 Nicotinate phosphoribosyltransferase family BED33_16630 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain BED33_16630 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal BED33_16630 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase BED33_16635 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb BED33_16635 IPR006195 Aminoacyl-tRNA synthetase, class II BED33_16635 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type BED33_16635 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) BED33_16635 IPR004522 Asparagine-tRNA ligase BED33_16635 IPR012340 Nucleic acid-binding, OB-fold BED33_16640 IPR033900 Porin domain, Gram-negative type BED33_16640 IPR023614 Porin domain superfamily BED33_16640 IPR001897 Porin, gammaproteobacterial BED33_16640 IPR001702 Porin, Gram-negative type BED33_16640 IPR013793 Porin, Gram-negative type, conserved site BED33_16645 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED33_16645 IPR000796 Aspartate/other aminotransferase BED33_16645 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED33_16645 IPR004839 Aminotransferase, class I/classII BED33_16645 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site BED33_16645 IPR015424 Pyridoxal phosphate-dependent transferase BED33_16655 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BED33_16655 IPR001279 Metallo-beta-lactamase BED33_16660 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily BED33_16660 IPR010275 Protein of unknown function DUF882 BED33_16660 IPR006311 Twin-arginine translocation pathway, signal sequence BED33_16665 IPR005490 L,D-transpeptidase catalytic domain BED33_16665 IPR038063 L,D-transpeptidase catalytic domain-like BED33_16665 IPR002477 Peptidoglycan binding-like BED33_16665 IPR036365 PGBD-like superfamily BED33_16670 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_16670 IPR007406 MukB, N-terminal domain BED33_16670 IPR032520 MukB, hinge domain BED33_16670 IPR012090 Chromosome partition protein MukB BED33_16675 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE BED33_16675 IPR042038 MukE, N-terminal domain BED33_16675 IPR042037 MukE, C-terminal domain BED33_16680 IPR036390 Winged helix DNA-binding domain superfamily BED33_16680 IPR033439 Chromosome partition protein MukF, winged-helix domain BED33_16680 IPR036141 MukF, middle domain superfamily BED33_16680 IPR033440 Chromosome partition protein MukF, middle domain BED33_16680 IPR038198 MukF, C-terminal domain superfamily BED33_16680 IPR033441 Chromosome partition protein MukF, C-terminal domain BED33_16680 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_16680 IPR005582 Chromosome partition protein MukF BED33_16685 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED33_16685 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase BED33_16690 IPR003848 Domain of unknown function DUF218 BED33_16695 IPR011009 Protein kinase-like domain superfamily BED33_16695 IPR002575 Aminoglycoside phosphotransferase BED33_16700 IPR029044 Nucleotide-diphospho-sugar transferases BED33_16700 IPR003329 Acylneuraminate cytidylyltransferase BED33_16700 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase BED33_16705 IPR005651 Trm112-like BED33_16710 IPR012340 Nucleic acid-binding, OB-fold BED33_16710 IPR019844 Cold-shock (CSD) domain BED33_16710 IPR011129 Cold shock domain BED33_16710 IPR002059 Cold-shock protein, DNA-binding BED33_16710 IPR012156 Cold shock, CspA BED33_16715 IPR019844 Cold-shock (CSD) domain BED33_16715 IPR011129 Cold shock domain BED33_16715 IPR012156 Cold shock, CspA BED33_16715 IPR002059 Cold-shock protein, DNA-binding BED33_16715 IPR012340 Nucleic acid-binding, OB-fold BED33_16720 IPR009770 Domain of unknown function DUF1338 BED33_16725 IPR003758 Tetraacyldisaccharide 4'-kinase BED33_16725 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_16730 IPR011527 ABC transporter type 1, transmembrane domain BED33_16730 IPR039421 Type I protein exporter BED33_16730 IPR003439 ABC transporter-like BED33_16730 IPR017871 ABC transporter, conserved site BED33_16730 IPR003593 AAA+ ATPase domain BED33_16730 IPR011917 ABC transporter, lipid A export, MsbA BED33_16730 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_16730 IPR036640 ABC transporter type 1, transmembrane domain superfamily BED33_16735 IPR004477 ComEC/Rec2-related protein BED33_16735 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BED33_16735 IPR001279 Metallo-beta-lactamase BED33_16735 IPR004797 Competence protein ComEC/Rec2 BED33_16735 IPR035681 ComA-like, MBL domain BED33_16740 IPR005685 Integration host factor, beta subunit BED33_16740 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily BED33_16740 IPR020816 Histone-like DNA-binding protein, conserved site BED33_16740 IPR000119 Histone-like DNA-binding protein BED33_16745 IPR012340 Nucleic acid-binding, OB-fold BED33_16745 IPR003029 S1 domain BED33_16745 IPR022967 RNA-binding domain, S1 BED33_16745 IPR000110 Ribosomal protein S1 BED33_16750 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_16750 IPR011994 Cytidylate kinase domain BED33_16750 IPR003136 Cytidylate kinase BED33_16755 IPR036968 Enolpyruvate transferase domain superfamily BED33_16755 IPR001986 Enolpyruvate transferase domain BED33_16755 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase BED33_16755 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site BED33_16755 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta BED33_16760 IPR015424 Pyridoxal phosphate-dependent transferase BED33_16760 IPR022278 Phosphoserine aminotransferase BED33_16760 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site BED33_16760 IPR000192 Aminotransferase class V domain BED33_16760 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED33_16760 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED33_16765 IPR007353 Protein of unknown function DUF421 BED33_16765 IPR023090 UPF0702, alpha/beta domain superfamily BED33_16770 IPR027473 L-asparaginase, C-terminal BED33_16770 IPR040919 Asparaginase/glutaminase, C-terminal BED33_16770 IPR006034 Asparaginase/glutaminase-like BED33_16770 IPR027474 L-asparaginase, N-terminal BED33_16770 IPR020827 Asparaginase/glutaminase, active site 1 BED33_16770 IPR037152 L-asparaginase, N-terminal domain superfamily BED33_16770 IPR036152 Asparaginase/glutaminase-like superfamily BED33_16770 IPR004550 L-asparaginase, type II BED33_16770 IPR027475 Asparaginase/glutaminase, active site 2 BED33_16775 IPR041080 YcaO cyclodehydratase, C-terminal BED33_16775 IPR003776 YcaO-like domain BED33_16780 IPR024002 Formate/nitrite transporter, conserved site BED33_16780 IPR000292 Formate/nitrite transporter BED33_16780 IPR023271 Aquaporin-like BED33_16780 IPR023999 Formate transporter FocA, putative BED33_16785 IPR001150 Glycine radical domain BED33_16785 IPR005949 Formate acetyltransferase BED33_16785 IPR019777 Formate C-acetyltransferase glycine radical, conserved site BED33_16785 IPR004184 Pyruvate formate lyase domain BED33_16790 IPR001989 Radical-activating enzyme, conserved site BED33_16790 IPR012839 Organic radical enzyme activase BED33_16790 IPR034457 Organic radical-activating enzymes BED33_16790 IPR012838 Pyruvate formate-lyase 1 activating enzyme BED33_16790 IPR013785 Aldolase-type TIM barrel BED33_16790 IPR007197 Radical SAM BED33_16790 IPR034465 Pyruvate formate-lyase activase BED33_16795 IPR011701 Major facilitator superfamily BED33_16795 IPR020846 Major facilitator superfamily domain BED33_16795 IPR023745 MSF-type transporter, YcaD BED33_16795 IPR036259 MFS transporter superfamily BED33_16800 IPR001207 Transposase, mutator type BED33_16810 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED33_16810 IPR003346 Transposase, IS116/IS110/IS902 BED33_16815 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm BED33_16815 IPR006195 Aminoacyl-tRNA synthetase, class II BED33_16815 IPR002317 Serine-tRNA ligase, type1 BED33_16815 IPR015866 Serine-tRNA synthetase, type1, N-terminal BED33_16815 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) BED33_16815 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily BED33_16815 IPR033729 Serine-tRNA ligase catalytic core domain BED33_16820 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_16820 IPR021886 MgsA AAA+ ATPase C-terminal BED33_16820 IPR003959 ATPase, AAA-type, core BED33_16820 IPR032423 AAA C-terminal domain BED33_16820 IPR003593 AAA+ ATPase domain BED33_16820 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal BED33_16825 IPR029046 Lipoprotein localisation LolA/LolB/LppX BED33_16825 IPR004564 Outer membrane lipoprotein carrier protein LolA-like BED33_16825 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria BED33_16830 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_16830 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_16830 IPR018541 FtsK gamma domain BED33_16830 IPR002543 FtsK domain BED33_16830 IPR041027 FtsK alpha domain BED33_16830 IPR025199 DNA translocase FtsK, 4TM region BED33_16830 IPR036390 Winged helix DNA-binding domain superfamily BED33_16835 IPR019888 Transcription regulator AsnC-type BED33_16835 IPR011008 Dimeric alpha-beta barrel BED33_16835 IPR000485 AsnC-type HTH domain BED33_16835 IPR036390 Winged helix DNA-binding domain superfamily BED33_16835 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain BED33_16835 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_16835 IPR011991 ArsR-like helix-turn-helix domain BED33_16835 IPR019885 Transcription regulator HTH, AsnC-type, conserved site BED33_16840 IPR023753 FAD/NAD(P)-binding domain BED33_16840 IPR005982 Thioredoxin reductase BED33_16840 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site BED33_16840 IPR036188 FAD/NAD(P)-binding domain superfamily BED33_16845 IPR036640 ABC transporter type 1, transmembrane domain superfamily BED33_16845 IPR011527 ABC transporter type 1, transmembrane domain BED33_16845 IPR039421 Type I protein exporter BED33_16845 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_16845 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD BED33_16845 IPR017871 ABC transporter, conserved site BED33_16845 IPR003593 AAA+ ATPase domain BED33_16845 IPR003439 ABC transporter-like BED33_16850 IPR011527 ABC transporter type 1, transmembrane domain BED33_16850 IPR036640 ABC transporter type 1, transmembrane domain superfamily BED33_16850 IPR003439 ABC transporter-like BED33_16850 IPR017871 ABC transporter, conserved site BED33_16850 IPR003593 AAA+ ATPase domain BED33_16850 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC BED33_16850 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_16855 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase BED33_16855 IPR016181 Acyl-CoA N-acyltransferase BED33_16855 IPR042203 Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal BED33_16860 IPR022967 RNA-binding domain, S1 BED33_16860 IPR004368 Translation initiation factor IF-1 BED33_16860 IPR012340 Nucleic acid-binding, OB-fold BED33_16860 IPR006196 RNA-binding domain, S1, IF1 type BED33_16865 IPR019489 Clp ATPase, C-terminal BED33_16865 IPR003959 ATPase, AAA-type, core BED33_16865 IPR003593 AAA+ ATPase domain BED33_16865 IPR041546 ClpA/ClpB, AAA lid domain BED33_16865 IPR028299 ClpA/B, conserved site 2 BED33_16865 IPR018368 ClpA/B, conserved site 1 BED33_16865 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_16865 IPR001270 ClpA/B family BED33_16865 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA BED33_16865 IPR004176 Clp, N-terminal BED33_16865 IPR036628 Clp, N-terminal domain superfamily BED33_16870 IPR022935 ATP-dependent Clp protease adaptor protein ClpS BED33_16870 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like BED33_16870 IPR003769 Adaptor protein ClpS, core BED33_16875 IPR012340 Nucleic acid-binding, OB-fold BED33_16875 IPR012751 CspD, cold shock BED33_16875 IPR002059 Cold-shock protein, DNA-binding BED33_16875 IPR019844 Cold-shock (CSD) domain BED33_16875 IPR012156 Cold shock, CspA BED33_16875 IPR011129 Cold shock domain BED33_16880 IPR025857 MacB-like periplasmic core domain BED33_16880 IPR017911 ABC transporter, macrolide export, ATP-binding domain BED33_16880 IPR017871 ABC transporter, conserved site BED33_16880 IPR003439 ABC transporter-like BED33_16880 IPR003838 ABC transporter permease protein domain BED33_16880 IPR003593 AAA+ ATPase domain BED33_16880 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_16885 IPR006143 RND efflux pump, membrane fusion protein BED33_16885 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BED33_16885 IPR030190 Macrolide export protein MacA BED33_16890 IPR007488 Protein of unknown function DUF535 BED33_16895 IPR006171 TOPRIM domain BED33_16895 IPR034139 OLD protein-like, TOPRIM domain BED33_16895 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_16895 IPR022602 Protein of unknown function DUF2813 BED33_16900 IPR005642 Lysine exporter LysO BED33_16905 IPR016100 Prismane, alpha-bundle BED33_16905 IPR011254 Prismane-like superfamily BED33_16905 IPR016099 Prismane-like, alpha/beta-sandwich BED33_16905 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase BED33_16905 IPR010048 Hydroxylamine reductase BED33_16910 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain BED33_16910 IPR001433 Oxidoreductase FAD/NAD(P)-binding BED33_16910 IPR012675 Beta-grasp domain superfamily BED33_16910 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain BED33_16910 IPR036010 2Fe-2S ferredoxin-like superfamily BED33_16910 IPR000951 Phthalate dioxygenase reductase BED33_16910 IPR017927 FAD-binding domain, ferredoxin reductase-type BED33_16910 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BED33_16910 IPR017938 Riboflavin synthase-like beta-barrel BED33_16915 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding BED33_16915 IPR000399 TPP-binding enzyme, conserved site BED33_16915 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain BED33_16915 IPR012000 Thiamine pyrophosphate enzyme, central domain BED33_16915 IPR029035 DHS-like NAD/FAD-binding domain superfamily BED33_16915 IPR029061 Thiamin diphosphate-binding fold BED33_16920 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp BED33_16920 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED33_16920 IPR011610 S-adenosyl-L-methionine-dependent methyltransferase, putative BED33_16925 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED33_16925 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED33_16925 IPR023603 Threonine aldolase BED33_16925 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase BED33_16925 IPR015424 Pyridoxal phosphate-dependent transferase BED33_16930 IPR016040 NAD(P)-binding domain BED33_16930 IPR021295 Protein of unknown function DUF2867 BED33_16930 IPR036291 NAD(P)-binding domain superfamily BED33_16935 IPR036291 NAD(P)-binding domain superfamily BED33_16935 IPR001509 NAD-dependent epimerase/dehydratase BED33_16940 IPR024289 Domain of unknown function DUF3828 BED33_16945 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_16945 IPR017871 ABC transporter, conserved site BED33_16945 IPR003439 ABC transporter-like BED33_16945 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type BED33_16945 IPR003593 AAA+ ATPase domain BED33_16950 IPR018313 Solute-binding protein family 3, conserved site BED33_16950 IPR001320 Ionotropic glutamate receptor BED33_16950 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter BED33_16950 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BED33_16955 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED33_16955 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain BED33_16955 IPR035906 MetI-like superfamily BED33_16960 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED33_16960 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain BED33_16960 IPR035906 MetI-like superfamily BED33_16965 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BED33_16965 IPR018313 Solute-binding protein family 3, conserved site BED33_16965 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter BED33_16965 IPR001320 Ionotropic glutamate receptor BED33_16970 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC BED33_16970 IPR030391 RNA methyltransferase TrmA, conserved site BED33_16970 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED33_16970 IPR010280 (Uracil-5)-methyltransferase family BED33_16970 IPR030390 RNA methyltransferase TrmA, active site BED33_16975 IPR019703 Protein of unknown function DUF2593 BED33_16980 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED33_16980 IPR035906 MetI-like superfamily BED33_16985 IPR035906 MetI-like superfamily BED33_16985 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED33_16990 IPR008995 Molybdate/tungstate binding, C-terminal BED33_16990 IPR003593 AAA+ ATPase domain BED33_16990 IPR003439 ABC transporter-like BED33_16990 IPR017871 ABC transporter, conserved site BED33_16990 IPR013611 Transport-associated OB, type 2 BED33_16990 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit BED33_16990 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_16995 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein BED33_16995 IPR006059 Bacterial extracellular solute-binding protein BED33_17000 IPR019660 Putative sensory transduction regulator YbjN BED33_17005 IPR010815 Protein of unknown function DUF1418 BED33_17010 IPR011767 Glutaredoxin active site BED33_17010 IPR014025 Glutaredoxin subgroup BED33_17010 IPR011902 Glutaredoxin, GrxA BED33_17010 IPR002109 Glutaredoxin BED33_17010 IPR036249 Thioredoxin-like superfamily BED33_17015 IPR006512 YidE/YbjL duplication BED33_17015 IPR023017 Transport protein YbjL, putative BED33_17015 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily BED33_17015 IPR006037 Regulator of K+ conductance, C-terminal BED33_17025 IPR033879 Undecaprenyl-diphosphatase BED33_17025 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BED33_17025 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily BED33_17030 IPR013785 Aldolase-type TIM barrel BED33_17030 IPR028581 Deoxyribose-phosphate aldolase type I BED33_17030 IPR011343 Deoxyribose-phosphate aldolase BED33_17030 IPR002915 DeoC/FbaB/ lacD aldolase BED33_17035 IPR018356 Transcription regulator, HTH DeoR-type, conserved site BED33_17035 IPR037171 NagB/RpiA transferase-like BED33_17035 IPR001034 DeoR-type HTH domain BED33_17035 IPR014036 DeoR C-terminal sensor domain BED33_17040 IPR004694 Hydroxy amino acid transporter BED33_17045 IPR029009 Allosteric substrate binding domain superfamily BED33_17045 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form BED33_17045 IPR005130 Serine dehydratase-like, alpha subunit BED33_17045 IPR005131 Serine dehydratase beta chain BED33_17050 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED33_17050 IPR003346 Transposase, IS116/IS110/IS902 BED33_17055 IPR012338 Beta-lactamase/transpeptidase-like BED33_17055 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal BED33_17055 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily BED33_17055 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal BED33_17055 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A BED33_17055 IPR015956 Penicillin-binding protein, C-terminal domain superfamily BED33_17060 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BED33_17060 IPR000644 CBS domain BED33_17060 IPR001926 Pyridoxal-phosphate dependent enzyme BED33_17060 IPR005857 Cystathionine beta-synthase BED33_17065 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED33_17065 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED33_17065 IPR015424 Pyridoxal phosphate-dependent transferase BED33_17065 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme BED33_17070 IPR035906 MetI-like superfamily BED33_17070 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED33_17075 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_17075 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain BED33_17075 IPR003439 ABC transporter-like BED33_17075 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal BED33_17075 IPR026253 Methionine import ATP-binding protein MetN BED33_17075 IPR018449 NIL domain BED33_17075 IPR003593 AAA+ ATPase domain BED33_17075 IPR017871 ABC transporter, conserved site BED33_17080 IPR004872 Lipoprotein NlpA family BED33_17090 IPR036412 HAD-like superfamily BED33_17090 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like BED33_17090 IPR023214 HAD superfamily BED33_17095 IPR004045 Glutathione S-transferase, N-terminal BED33_17095 IPR010987 Glutathione S-transferase, C-terminal-like BED33_17095 IPR036249 Thioredoxin-like superfamily BED33_17095 IPR036282 Glutathione S-transferase, C-terminal domain superfamily BED33_17095 IPR004046 Glutathione S-transferase, C-terminal BED33_17100 IPR012910 TonB-dependent receptor, plug domain BED33_17100 IPR000531 TonB-dependent receptor-like, beta-barrel BED33_17100 IPR037066 TonB-dependent receptor, plug domain superfamily BED33_17100 IPR010917 TonB-dependent receptor, conserved site BED33_17100 IPR010916 TonB box, conserved site BED33_17100 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BED33_17100 IPR039426 Vitamin B12 transporter BtuB-like BED33_17105 IPR003439 ABC transporter-like BED33_17105 IPR015863 ABC transporter, hemin import, HmuV BED33_17105 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_17105 IPR003593 AAA+ ATPase domain BED33_17110 IPR000522 ABC transporter, permease protein, BtuC-like BED33_17110 IPR037294 ABC transporter, BtuC-like BED33_17115 IPR004841 Amino acid permease/ SLC12A domain BED33_17115 IPR004840 Amino acid permease, conserved site BED33_17120 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_17120 IPR000847 Transcription regulator HTH, LysR BED33_17120 IPR036390 Winged helix DNA-binding domain superfamily BED33_17120 IPR005119 LysR, substrate-binding BED33_17135 IPR018383 Uncharacterised protein family UPF0324, prokaryote BED33_17135 IPR004630 Uncharacterised protein family UPF0324, bacteria BED33_17140 IPR013022 Xylose isomerase-like, TIM barrel domain BED33_17140 IPR018246 AP endonuclease 2, zinc binding site BED33_17140 IPR036237 Xylose isomerase-like superfamily BED33_17140 IPR001719 AP endonuclease 2 BED33_17145 IPR000015 Outer membrane usher protein BED33_17145 IPR037224 PapC, N-terminal domain superfamily BED33_17145 IPR025885 PapC, N-terminal domain BED33_17145 IPR025949 PapC-like, C-terminal domain BED33_17145 IPR018030 Fimbrial membrane usher, conserved site BED33_17145 IPR042186 Outer membrane usher protein FimD, plug domain BED33_17150 IPR036316 Pili assembly chaperone, C-terminal domain superfamily BED33_17150 IPR001829 Pili assembly chaperone, bacterial BED33_17150 IPR016148 Pili assembly chaperone, C-terminal BED33_17150 IPR018046 Pili assembly chaperone, conserved site BED33_17150 IPR016147 Pili assembly chaperone, N-terminal BED33_17150 IPR013783 Immunoglobulin-like fold BED33_17150 IPR008962 PapD-like superfamily BED33_17160 IPR035182 Protein of unknown function PsaF BED33_17165 IPR001867 OmpR/PhoB-type DNA-binding domain BED33_17165 IPR016032 Signal transduction response regulator, C-terminal effector BED33_17165 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_17170 IPR003353 Phosphotransferase system, fructose-specific IIB subunit BED33_17170 IPR013014 Phosphotransferase system, EIIC component, type 2 BED33_17170 IPR003352 Phosphotransferase system, EIIC BED33_17170 IPR036095 PTS system IIB component-like superfamily BED33_17170 IPR013011 Phosphotransferase system, EIIB component, type 2 BED33_17170 IPR006327 Phosphotransferase system, fructose IIC component BED33_17170 IPR003501 Phosphotransferase system, EIIB component, type 2/3 BED33_17175 IPR022463 Fructose 1-phosphate kinase BED33_17175 IPR017583 Tagatose/fructose phosphokinase BED33_17175 IPR029056 Ribokinase-like BED33_17175 IPR011611 Carbohydrate kinase PfkB BED33_17175 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site BED33_17180 IPR002114 Phosphotransferase system, HPr serine phosphorylation site BED33_17180 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site BED33_17180 IPR002178 PTS EIIA type-2 domain BED33_17180 IPR016152 Phosphotransferase/anion transporter BED33_17180 IPR035895 HPr-like superfamily BED33_17180 IPR000032 Phosphocarrier protein HPr-like BED33_17185 IPR000086 NUDIX hydrolase domain BED33_17185 IPR015797 NUDIX hydrolase-like domain superfamily BED33_17185 IPR020476 NUDIX hydrolase BED33_17185 IPR023214 HAD superfamily BED33_17185 IPR006357 HAD-superfamily hydrolase, subfamily IIA BED33_17185 IPR036412 HAD-like superfamily BED33_17185 IPR020084 NUDIX hydrolase, conserved site BED33_17190 IPR011031 Multihaem cytochrome BED33_17190 IPR036280 Multiheme cytochrome superfamily BED33_17190 IPR005126 NapC/NirT cytochrome c, N-terminal BED33_17190 IPR038266 NapC/NirT cytochrome c superfamily BED33_17190 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK BED33_17195 IPR006657 Molybdopterin dinucleotide-binding domain BED33_17195 IPR041954 Trimethylamine-N-oxide reductase-like, molybdopterin-binding domain BED33_17195 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase BED33_17195 IPR006656 Molybdopterin oxidoreductase BED33_17195 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site BED33_17195 IPR041460 Molybdopterin oxidoreductase, N-terminal BED33_17195 IPR006311 Twin-arginine translocation pathway, signal sequence BED33_17195 IPR009010 Aspartate decarboxylase-like domain superfamily BED33_17200 IPR005358 Putative zinc- or iron-chelating domain containing protein BED33_17205 IPR018227 Amino acid/polyamine transporter 2 BED33_17205 IPR013059 Tryptophan/tyrosine transporter BED33_17210 IPR020599 Translation elongation factor P/YeiP BED33_17210 IPR013852 Translation elongation factor P/YeiP, conserved site BED33_17210 IPR014722 Ribosomal protein L2, domain 2 BED33_17210 IPR008991 Translation protein SH3-like domain superfamily BED33_17210 IPR015365 Elongation factor P, C-terminal BED33_17210 IPR012340 Nucleic acid-binding, OB-fold BED33_17210 IPR011897 Translation elongation factor P-like, YeiP BED33_17210 IPR013185 Translation elongation factor, KOW-like BED33_17210 IPR001059 Translation elongation factor P/YeiP, central BED33_17215 IPR004628 Mannonate dehydratase BED33_17215 IPR036237 Xylose isomerase-like superfamily BED33_17225 IPR023027 Mannitol dehydrogenase, conserved site BED33_17225 IPR013328 6-phosphogluconate dehydrogenase, domain 2 BED33_17225 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BED33_17225 IPR013131 Mannitol dehydrogenase, N-terminal BED33_17225 IPR036291 NAD(P)-binding domain superfamily BED33_17225 IPR000669 Mannitol dehydrogenase BED33_17225 IPR013118 Mannitol dehydrogenase, C-terminal BED33_17230 IPR011711 GntR, C-terminal BED33_17230 IPR008920 Transcription regulator FadR/GntR, C-terminal BED33_17230 IPR000524 Transcription regulator HTH, GntR BED33_17230 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_17230 IPR036390 Winged helix DNA-binding domain superfamily BED33_17240 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal BED33_17240 IPR003495 CobW/HypB/UreG, nucleotide-binding domain BED33_17240 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_17245 IPR032908 Lipid A 1-diphosphate synthase BED33_17245 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily BED33_17245 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BED33_17250 IPR000064 Endopeptidase, NLPC/P60 domain BED33_17250 IPR038765 Papain-like cysteine peptidase superfamily BED33_17260 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain BED33_17260 IPR001633 EAL domain BED33_17260 IPR035919 EAL domain superfamily BED33_17265 IPR039424 Solute-binding protein family 5 BED33_17265 IPR030678 Peptide/nickel binding protein, MppA-type BED33_17265 IPR000914 Solute-binding protein family 5 domain BED33_17270 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED33_17270 IPR035906 MetI-like superfamily BED33_17275 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED33_17275 IPR035906 MetI-like superfamily BED33_17275 IPR025966 Oligopeptide transport permease C-like, N-terminal domain BED33_17280 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_17280 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal BED33_17280 IPR017871 ABC transporter, conserved site BED33_17280 IPR003439 ABC transporter-like BED33_17280 IPR003593 AAA+ ATPase domain BED33_17285 IPR020489 Uncharacterised protein family YejG BED33_17290 IPR004812 Drug resistance transporter Bcr/CmlA subfamily BED33_17290 IPR004734 Multidrug resistance protein BED33_17290 IPR036259 MFS transporter superfamily BED33_17290 IPR020846 Major facilitator superfamily domain BED33_17290 IPR011701 Major facilitator superfamily BED33_17295 IPR002942 RNA-binding S4 domain BED33_17295 IPR036986 RNA-binding S4 domain superfamily BED33_17295 IPR006145 Pseudouridine synthase, RsuA/RluA BED33_17295 IPR020103 Pseudouridine synthase, catalytic domain superfamily BED33_17295 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain BED33_17295 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F BED33_17295 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site BED33_17300 IPR001650 Helicase, C-terminal BED33_17300 IPR011332 Zinc-binding ribosomal protein BED33_17300 IPR006935 Helicase/UvrB, N-terminal BED33_17300 IPR014001 Helicase superfamily 1/2, ATP-binding domain BED33_17300 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_17305 IPR020055 Ribosomal protein L25, short-form BED33_17305 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily BED33_17305 IPR029751 Ribosomal protein L25 BED33_17305 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal BED33_17310 IPR007358 Nucleoid-associated protein NdpA BED33_17315 IPR009857 Uncharacterised protein family UPF0352 BED33_17315 IPR023202 YejL-like superfamily BED33_17320 IPR024588 Inner membrane protein YejM, N-terminal BED33_17320 IPR012159 Inner membrane protein YejM BED33_17320 IPR000917 Sulfatase, N-terminal BED33_17320 IPR017850 Alkaline-phosphatase-like, core domain superfamily BED33_17340 IPR001207 Transposase, mutator type BED33_17350 IPR009057 Homeobox-like domain superfamily BED33_17350 IPR002514 Transposase IS3/IS911family BED33_17355 IPR038965 Transposase InsF-like BED33_17370 IPR041891 Carbonic anhydrase, prokaryotic-like BED33_17370 IPR018338 Carbonic anhydrase, alpha-class, conserved site BED33_17370 IPR023561 Carbonic anhydrase, alpha-class BED33_17370 IPR036398 Alpha carbonic anhydrase domain superfamily BED33_17370 IPR001148 Alpha carbonic anhydrase domain BED33_17375 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site BED33_17375 IPR017853 Glycoside hydrolase superfamily BED33_17375 IPR018120 Glycoside hydrolase family 1, active site BED33_17375 IPR001360 Glycoside hydrolase family 1 BED33_17380 IPR001996 Phosphotransferase system, IIB component, type 1 BED33_17380 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 BED33_17380 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site BED33_17380 IPR036878 Glucose permease domain IIB BED33_17380 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component BED33_17380 IPR011055 Duplicated hybrid motif BED33_17380 IPR003352 Phosphotransferase system, EIIC BED33_17380 IPR013013 Phosphotransferase system, EIIC component, type 1 BED33_17380 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component BED33_17385 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_17385 IPR001347 Sugar isomerase (SIS) BED33_17385 IPR035472 RpiR-like, SIS domain BED33_17385 IPR009057 Homeobox-like domain superfamily BED33_17385 IPR000281 Helix-turn-helix protein RpiR BED33_17405 IPR010534 Bacteriophage 933W, GpQ BED33_17415 IPR036687 DinI-like superfamily BED33_17415 IPR010391 DNA damage-inducible protein DinI-like BED33_17420 IPR020080 Outer membrane adhesin/peptidase omptin BED33_17420 IPR000036 Peptidase A26, omptin BED33_17420 IPR020079 Peptidase A26, omptin, conserved site BED33_17425 IPR033479 Double Cache domain 1 BED33_17425 IPR003660 HAMP domain BED33_17425 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BED33_17425 IPR029151 Periplasmic sensor-like domain superfamily BED33_17425 IPR000727 Target SNARE coiled-coil homology domain BED33_17425 IPR004090 Chemotaxis methyl-accepting receptor BED33_17430 IPR001279 Metallo-beta-lactamase BED33_17430 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BED33_17430 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D BED33_17435 IPR039672 Lactose permease-like BED33_17435 IPR018043 Sodium:galactoside symporter, conserved site BED33_17435 IPR001927 Sodium:galactoside symporter BED33_17435 IPR036259 MFS transporter superfamily BED33_17440 IPR001466 Beta-lactamase-related BED33_17440 IPR012338 Beta-lactamase/transpeptidase-like BED33_17455 IPR023614 Porin domain superfamily BED33_17455 IPR001897 Porin, gammaproteobacterial BED33_17455 IPR001702 Porin, Gram-negative type BED33_17455 IPR013793 Porin, Gram-negative type, conserved site BED33_17460 IPR006144 Secretion protein HlyD, conserved site BED33_17460 IPR010129 Type I secretion membrane fusion protein, HlyD family BED33_17470 IPR011701 Major facilitator superfamily BED33_17470 IPR020846 Major facilitator superfamily domain BED33_17470 IPR036259 MFS transporter superfamily BED33_17475 IPR005467 Histidine kinase domain BED33_17475 IPR003594 Histidine kinase/HSP90-like ATPase BED33_17475 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BED33_17475 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain BED33_17475 IPR038616 Phosphotransferase RcsD, RcsD-ABL domain superfamily BED33_17475 IPR032306 Phosphotransferase RcsD, RcsD-ABL domain BED33_17475 IPR030861 Phosphotransferase RcsD BED33_17475 IPR036641 HPT domain superfamily BED33_17480 IPR011006 CheY-like superfamily BED33_17480 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_17480 IPR030864 Transcriptional regulatory protein RcsB BED33_17480 IPR016032 Signal transduction response regulator, C-terminal effector BED33_17480 IPR000792 Transcription regulator LuxR, C-terminal BED33_17480 IPR001789 Signal transduction response regulator, receiver domain BED33_17485 IPR003594 Histidine kinase/HSP90-like ATPase BED33_17485 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BED33_17485 IPR011006 CheY-like superfamily BED33_17485 IPR005467 Histidine kinase domain BED33_17485 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BED33_17485 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BED33_17485 IPR030856 Sensor histidine kinase RcsC BED33_17485 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal BED33_17485 IPR001789 Signal transduction response regulator, receiver domain BED33_17485 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BED33_17485 IPR038388 RcsC, C-terminal domain superfamily BED33_17490 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal BED33_17490 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily BED33_17490 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat BED33_17490 IPR005743 DNA gyrase, subunit A BED33_17490 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta BED33_17490 IPR013760 DNA topoisomerase, type IIA-like domain superfamily BED33_17490 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal BED33_17495 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED33_17495 IPR010233 Ubiquinone biosynthesis O-methyltransferase BED33_17500 IPR013509 Ribonucleotide reductase large subunit, N-terminal BED33_17500 IPR000788 Ribonucleotide reductase large subunit, C-terminal BED33_17500 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal BED33_17500 IPR039718 Ribonucleoside-diphosphate reductase large subunit BED33_17500 IPR013346 Ribonucleotide reductase, class I , alpha subunit BED33_17500 IPR005144 ATP-cone domain BED33_17505 IPR033909 Ribonucleotide reductase small subunit BED33_17505 IPR012348 Ribonucleotide reductase-like BED33_17505 IPR030475 Ribonucleotide reductase small subunit, acitve site BED33_17505 IPR009078 Ferritin-like superfamily BED33_17505 IPR000358 Ribonucleotide reductase small subunit family BED33_17515 IPR005658 Proteinase inhibitor I11, ecotin BED33_17515 IPR036198 Ecotin superfamily BED33_17515 IPR023084 Proteinase inhibitor I11, ecotin, gammaproteobacteria BED33_17530 IPR008135 Competence-induced protein CinA BED33_17530 IPR001453 MoaB/Mog domain BED33_17530 IPR036425 MoaB/Mog-like domain superfamily BED33_17530 IPR036653 CinA-like, C-terminal BED33_17535 IPR013061 Tryptophan/tryrosine permease, conserved site BED33_17535 IPR013059 Tryptophan/tyrosine transporter BED33_17535 IPR018227 Amino acid/polyamine transporter 2 BED33_17540 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel BED33_17540 IPR009998 YfaZ BED33_17540 IPR023614 Porin domain superfamily BED33_17545 IPR037060 Catalase core domain superfamily BED33_17545 IPR010582 Catalase immune-responsive domain BED33_17545 IPR002226 Catalase haem-binding site BED33_17545 IPR011614 Catalase core domain BED33_17545 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 BED33_17545 IPR024708 Catalase active site BED33_17545 IPR040333 Catalase, clade 3 BED33_17545 IPR018028 Catalase, mono-functional, haem-containing BED33_17545 IPR020835 Catalase superfamily BED33_17550 IPR000873 AMP-dependent synthetase/ligase BED33_17550 IPR020845 AMP-binding, conserved site BED33_17550 IPR025110 AMP-binding enzyme, C-terminal domain BED33_17550 IPR010192 2-succinylbenzoate--CoA ligase BED33_17550 IPR042099 AMP-dependent synthetase-like superfamily BED33_17555 IPR029065 Enolase C-terminal domain-like BED33_17555 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal BED33_17555 IPR010196 o-Succinylbenzoate synthase, MenC type1 BED33_17555 IPR036849 Enolase-like, C-terminal domain superfamily BED33_17555 IPR029017 Enolase-like, N-terminal BED33_17560 IPR001753 Enoyl-CoA hydratase/isomerase BED33_17560 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site BED33_17560 IPR029045 ClpP/crotonase-like domain superfamily BED33_17560 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB BED33_17560 IPR014748 Enoyl-CoA hydratase, C-terminal BED33_17565 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase BED33_17565 IPR029058 Alpha/Beta hydrolase fold BED33_17565 IPR000073 Alpha/beta hydrolase fold-1 BED33_17570 IPR032264 Menaquinone biosynthesis protein MenD, middle domain BED33_17570 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase BED33_17570 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain BED33_17570 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding BED33_17570 IPR029035 DHS-like NAD/FAD-binding domain superfamily BED33_17570 IPR029061 Thiamin diphosphate-binding fold BED33_17575 IPR034681 Isochorismate synthase MenF BED33_17575 IPR004561 Isochorismate synthase BED33_17575 IPR015890 Chorismate-utilising enzyme, C-terminal BED33_17575 IPR005801 ADC synthase BED33_17580 IPR010279 Inner membrane protein YqjD/ElaB BED33_17585 IPR004786 6-phosphogluconate dehydratase BED33_17585 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase BED33_17585 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site BED33_17585 IPR042096 Dihydroxy-acid dehydratase, C-terminal BED33_17585 IPR037237 IlvD/EDD, N-terminal domain BED33_17590 IPR038084 GlcG-like domain superfamily BED33_17590 IPR005624 Haem-degrading BED33_17590 IPR010371 Uncharacterised protein family UPF0303 BED33_17595 IPR020846 Major facilitator superfamily domain BED33_17595 IPR011701 Major facilitator superfamily BED33_17595 IPR036259 MFS transporter superfamily BED33_17600 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain BED33_17600 IPR036291 NAD(P)-binding domain superfamily BED33_17600 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BED33_17605 IPR028082 Periplasmic binding protein-like I BED33_17605 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BED33_17605 IPR000843 LacI-type HTH domain BED33_17610 IPR020904 Short-chain dehydrogenase/reductase, conserved site BED33_17610 IPR002347 Short-chain dehydrogenase/reductase SDR BED33_17610 IPR036291 NAD(P)-binding domain superfamily BED33_17615 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_17615 IPR006001 Carbohydrate kinase, thermoresistant glucokinase BED33_17615 IPR031322 Shikimate kinase/gluconokinase BED33_17625 IPR009476 Protein of unknown function DUF1097 BED33_17635 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 BED33_17635 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit BED33_17640 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit BED33_17640 IPR003918 NADH:ubiquinone oxidoreductase BED33_17640 IPR010227 NADH-quinone oxidoreductase, chain M/4 BED33_17645 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal BED33_17645 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup BED33_17645 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 BED33_17645 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit BED33_17650 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like BED33_17650 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K BED33_17655 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 BED33_17655 IPR042106 NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ BED33_17660 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BED33_17660 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BED33_17660 IPR010226 NADH-quinone oxidoreductase, chain I BED33_17665 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H BED33_17665 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site BED33_17670 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain BED33_17670 IPR006656 Molybdopterin oxidoreductase BED33_17670 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain BED33_17670 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site BED33_17670 IPR006657 Molybdopterin dinucleotide-binding domain BED33_17670 IPR009010 Aspartate decarboxylase-like domain superfamily BED33_17670 IPR010228 NADH:ubiquinone oxidoreductase, subunit G BED33_17670 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding BED33_17670 IPR036010 2Fe-2S ferredoxin-like superfamily BED33_17675 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily BED33_17675 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain BED33_17675 IPR011537 NADH ubiquinone oxidoreductase, F subunit BED33_17675 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site BED33_17675 IPR019554 Soluble ligand binding domain BED33_17675 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain BED33_17675 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily BED33_17680 IPR041921 NADH-quinone oxidoreductase subunit E, N-terminal BED33_17680 IPR042128 NuoE domain BED33_17680 IPR002023 NADH-quinone oxidoreductase subunit E-like BED33_17680 IPR036249 Thioredoxin-like superfamily BED33_17685 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily BED33_17685 IPR023062 NADH dehydrogenase, subunit CD BED33_17685 IPR001135 NADH-quinone oxidoreductase, subunit D BED33_17685 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily BED33_17685 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit BED33_17685 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site BED33_17685 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H BED33_17685 IPR029014 [NiFe]-hydrogenase, large subunit BED33_17685 IPR010218 NADH dehydrogenase, subunit C BED33_17690 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit BED33_17690 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit BED33_17695 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid BED33_17695 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily BED33_17695 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 BED33_17700 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_17700 IPR036390 Winged helix DNA-binding domain superfamily BED33_17700 IPR000847 Transcription regulator HTH, LysR BED33_17700 IPR005119 LysR, substrate-binding BED33_17705 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED33_17705 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED33_17705 IPR015424 Pyridoxal phosphate-dependent transferase BED33_17705 IPR004839 Aminotransferase, class I/classII BED33_17710 IPR022971 5'-deoxynucleotidase YfbR BED33_17710 IPR003607 HD/PDEase domain BED33_17710 IPR039356 Metal-dependent nucleoside 5'-monophosphatase BED33_17715 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily BED33_17715 IPR006037 Regulator of K+ conductance, C-terminal BED33_17715 IPR031312 Sodium/sulphate symporter, conserved site BED33_17715 IPR004680 Citrate transporter-like domain BED33_17725 IPR041492 Haloacid dehalogenase-like hydrolase BED33_17725 IPR023214 HAD superfamily BED33_17725 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BED33_17725 IPR036412 HAD-like superfamily BED33_17725 IPR006439 HAD hydrolase, subfamily IA BED33_17730 IPR005587 Uncharacterised protein family UPF0304, YfbU BED33_17730 IPR023146 YfbU, alpha-helical bundle domain superfamily BED33_17730 IPR023145 YfbU, helix-hairpin domain superfamily BED33_17735 IPR007334 Uncharacterised protein family UPF0208 BED33_17740 IPR000890 Aliphatic acid kinase, short-chain BED33_17740 IPR004372 Acetate/propionate kinase BED33_17740 IPR023865 Aliphatic acid kinase, short-chain, conserved site BED33_17745 IPR042113 Phosphate acetyltransferase, domain 1 BED33_17745 IPR042112 Phosphate acetyltransferase, domain 2 BED33_17745 IPR002505 Phosphate acetyl/butaryl transferase BED33_17745 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily BED33_17745 IPR004614 Phosphate acetyltransferase BED33_17745 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_17745 IPR016475 Phosphate acetyltransferase, bacteria BED33_17745 IPR010766 DRTGG BED33_17750 IPR028082 Periplasmic binding protein-like I BED33_17750 IPR001761 Periplasmic binding protein/LacI sugar binding domain BED33_17750 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BED33_17750 IPR000843 LacI-type HTH domain BED33_17755 IPR016152 Phosphotransferase/anion transporter BED33_17755 IPR002178 PTS EIIA type-2 domain BED33_17765 IPR004703 Phosphotransferase system, sugar-specific permease component BED33_17770 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED33_17770 IPR003346 Transposase, IS116/IS110/IS902 BED33_17775 IPR024195 NUDIX hydrolase, YfcD, predicted BED33_17775 IPR015797 NUDIX hydrolase-like domain superfamily BED33_17775 IPR000086 NUDIX hydrolase domain BED33_17790 IPR013549 Domain of unknown function DUF1731 BED33_17790 IPR001509 NAD-dependent epimerase/dehydratase BED33_17790 IPR010099 Epimerase family protein SDR39U1 BED33_17790 IPR036291 NAD(P)-binding domain superfamily BED33_17800 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type BED33_17800 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_17800 IPR017871 ABC transporter, conserved site BED33_17800 IPR003439 ABC transporter-like BED33_17800 IPR003593 AAA+ ATPase domain BED33_17805 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain BED33_17805 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED33_17805 IPR035906 MetI-like superfamily BED33_17810 IPR035906 MetI-like superfamily BED33_17810 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED33_17810 IPR030199 Histidine transport system permease protein HisQ BED33_17810 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain BED33_17815 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter BED33_17815 IPR018313 Solute-binding protein family 3, conserved site BED33_17815 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BED33_17820 IPR036551 Flavin prenyltransferase-like BED33_17820 IPR003382 Flavoprotein BED33_17820 IPR004507 Flavin prenyltransferase UbiX-like BED33_17825 IPR000836 Phosphoribosyltransferase domain BED33_17825 IPR029057 Phosphoribosyltransferase-like BED33_17825 IPR029055 Nucleophile aminohydrolases, N-terminal BED33_17825 IPR035584 Amidophosphoribosyltransferase, N-terminal BED33_17825 IPR005854 Amidophosphoribosyltransferase BED33_17825 IPR017932 Glutamine amidotransferase type 2 domain BED33_17830 IPR003825 Colicin V production, CvpA BED33_17835 IPR032898 Cell division protein DedD BED33_17835 IPR007730 Sporulation-like domain BED33_17835 IPR036680 Sporulation-like domain superfamily BED33_17840 IPR001645 Folylpolyglutamate synthetase BED33_17840 IPR018109 Folylpolyglutamate synthetase, conserved site BED33_17840 IPR036565 Mur-like, catalytic domain superfamily BED33_17840 IPR013221 Mur ligase, central BED33_17840 IPR004101 Mur ligase, C-terminal BED33_17840 IPR036615 Mur ligase, C-terminal domain superfamily BED33_17845 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit BED33_17845 IPR034733 Acetyl-CoA carboxylase BED33_17845 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal BED33_17845 IPR041010 Acetyl-coA carboxylase zinc finger domain BED33_17845 IPR029045 ClpP/crotonase-like domain superfamily BED33_17850 IPR032816 SNARE associated Golgi protein BED33_17850 IPR032818 DedA family BED33_17855 IPR020095 Pseudouridine synthase I, TruA, C-terminal BED33_17855 IPR020103 Pseudouridine synthase, catalytic domain superfamily BED33_17855 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain BED33_17855 IPR001406 Pseudouridine synthase I, TruA BED33_17860 IPR036291 NAD(P)-binding domain superfamily BED33_17860 IPR000534 Semialdehyde dehydrogenase, NAD-binding BED33_17860 IPR012280 Semialdehyde dehydrogenase, dimerisation domain BED33_17865 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain BED33_17865 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 BED33_17865 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site BED33_17865 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BED33_17865 IPR020921 Erythronate-4-phosphate dehydrogenase BED33_17865 IPR036291 NAD(P)-binding domain superfamily BED33_17865 IPR038251 PdxB, dimerisation domain superfamily BED33_17865 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain BED33_17880 IPR000620 EamA domain BED33_17885 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED33_17885 IPR015424 Pyridoxal phosphate-dependent transferase BED33_17885 IPR004839 Aminotransferase, class I/classII BED33_17885 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED33_17890 IPR013766 Thioredoxin domain BED33_17890 IPR017937 Thioredoxin, conserved site BED33_17890 IPR036249 Thioredoxin-like superfamily BED33_17890 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant BED33_17900 IPR003834 Cytochrome C biogenesis protein, transmembrane domain BED33_17900 IPR022910 Thiol:disulphide interchange protein DsbD BED33_17900 IPR036249 Thioredoxin-like superfamily BED33_17900 IPR017937 Thioredoxin, conserved site BED33_17900 IPR013766 Thioredoxin domain BED33_17900 IPR035671 DsbD gamma BED33_17900 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily BED33_17900 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain BED33_17910 IPR023597 Flagellar regulator Flk BED33_17915 IPR004680 Citrate transporter-like domain BED33_17920 IPR029033 Histidine phosphatase superfamily BED33_17920 IPR000560 Histidine phosphatase superfamily, clade-2 BED33_17920 IPR033379 Histidine acid phosphatase active site BED33_17925 IPR000843 LacI-type HTH domain BED33_17925 IPR006377 Catabolite control protein A BED33_17925 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BED33_17925 IPR028082 Periplasmic binding protein-like I BED33_17930 IPR013012 Phosphotransferase system, EIIB component, type 3 BED33_17930 IPR003501 Phosphotransferase system, EIIB component, type 2/3 BED33_17930 IPR036095 PTS system IIB component-like superfamily BED33_17935 IPR004501 Phosphotransferase system, EIIC component, type 3 BED33_17935 IPR003352 Phosphotransferase system, EIIC BED33_17935 IPR004796 Phosphotransferase system, cellobiose-type IIC component BED33_17940 IPR018120 Glycoside hydrolase family 1, active site BED33_17940 IPR017853 Glycoside hydrolase superfamily BED33_17940 IPR001360 Glycoside hydrolase family 1 BED33_17945 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit BED33_17945 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily BED33_17955 IPR004380 Aspartate racemase BED33_17955 IPR001920 Asp/Glu racemase BED33_17955 IPR015942 Asp/Glu/hydantoin racemase BED33_17955 IPR018187 Asp/Glu racemase, active site 1 BED33_17955 IPR033134 Asp/Glu racemase, active site 2 BED33_17965 IPR016039 Thiolase-like BED33_17965 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BED33_17965 IPR014030 Beta-ketoacyl synthase, N-terminal BED33_17965 IPR014031 Beta-ketoacyl synthase, C-terminal BED33_17965 IPR018201 Beta-ketoacyl synthase, active site BED33_17965 IPR000794 Beta-ketoacyl synthase BED33_17970 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal BED33_17970 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC BED33_17970 IPR008471 MnmC-like methyltransferase BED33_17970 IPR036188 FAD/NAD(P)-binding domain superfamily BED33_17970 IPR006076 FAD dependent oxidoreductase BED33_17975 IPR014987 Uncharacterised protein family YfcL BED33_17980 IPR007411 Elongation factor P hydroxylase BED33_17985 IPR002781 Transmembrane protein TauE-like BED33_17990 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily BED33_17990 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase BED33_17995 IPR035904 Chorismate synthase AroC superfamily BED33_17995 IPR000453 Chorismate synthase BED33_17995 IPR020541 Chorismate synthase, conserved site BED33_18000 IPR002052 DNA methylase, N-6 adenine-specific, conserved site BED33_18000 IPR004556 Methyltransferase HemK-like BED33_18000 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase BED33_18000 IPR007848 Methyltransferase small domain BED33_18000 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED33_18005 IPR036063 Smr domain superfamily BED33_18005 IPR022990 Uncharacterised protein family UPF0115 BED33_18005 IPR002625 Smr domain BED33_18010 IPR029033 Histidine phosphatase superfamily BED33_18010 IPR004449 Phosphohistidine phosphatase SixA BED33_18010 IPR013078 Histidine phosphatase superfamily, clade-1 BED33_18015 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding BED33_18015 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site BED33_18015 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal BED33_18015 IPR001753 Enoyl-CoA hydratase/isomerase BED33_18015 IPR029045 ClpP/crotonase-like domain superfamily BED33_18015 IPR012802 Fatty oxidation complex, alpha subunit FadJ BED33_18015 IPR036291 NAD(P)-binding domain superfamily BED33_18015 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BED33_18020 IPR012806 Acetyl-CoA C-acyltransferase FadI BED33_18020 IPR020616 Thiolase, N-terminal BED33_18020 IPR020613 Thiolase, conserved site BED33_18020 IPR020617 Thiolase, C-terminal BED33_18020 IPR020610 Thiolase, active site BED33_18020 IPR020615 Thiolase, acyl-enzyme intermediate active site BED33_18020 IPR016039 Thiolase-like BED33_18020 IPR002155 Thiolase BED33_18025 IPR035571 UPF0234-like, C-terminal BED33_18025 IPR005272 Conserved hypothetical protein CHP00743 BED33_18030 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) BED33_18030 IPR042117 OMPP1/FadL/TodX superfamily BED33_18035 IPR007428 MlaA lipoprotein BED33_18040 IPR013026 Tetratricopeptide repeat-containing domain BED33_18040 IPR011990 Tetratricopeptide-like helical domain superfamily BED33_18040 IPR005616 CcmH/CycL/Ccl2/NrfF family BED33_18040 IPR019734 Tetratricopeptide repeat BED33_18040 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily BED33_18045 IPR019734 Tetratricopeptide repeat BED33_18045 IPR011990 Tetratricopeptide-like helical domain superfamily BED33_18045 IPR013026 Tetratricopeptide repeat-containing domain BED33_18045 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily BED33_18045 IPR017560 Cytochrome c-type biogenesis protein CcmI BED33_18045 IPR005616 CcmH/CycL/Ccl2/NrfF family BED33_18050 IPR013766 Thioredoxin domain BED33_18050 IPR017937 Thioredoxin, conserved site BED33_18050 IPR036249 Thioredoxin-like superfamily BED33_18050 IPR013740 Redoxin BED33_18050 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE BED33_18055 IPR003567 Cytochrome c-type biogenesis protein BED33_18055 IPR002541 Cytochrome c assembly protein BED33_18055 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal BED33_18055 IPR003568 Cytochrome c-type biogenesis protein CcmF BED33_18060 IPR004329 CcmE/CycJ protein BED33_18060 IPR036127 CcmE-like superfamily BED33_18065 IPR007078 Haem exporter protein D (CcmD) BED33_18070 IPR003557 Cytochrome c-type biogenesis protein CcmC BED33_18070 IPR002541 Cytochrome c assembly protein BED33_18075 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria BED33_18075 IPR003544 Cytochrome c-type biogenesis protein CcmB BED33_18080 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_18080 IPR005895 ABC transporter, haem export, CcmA BED33_18080 IPR017871 ABC transporter, conserved site BED33_18080 IPR003439 ABC transporter-like BED33_18080 IPR003593 AAA+ ATPase domain BED33_18085 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED33_18085 IPR003346 Transposase, IS116/IS110/IS902 BED33_18090 IPR023271 Aquaporin-like BED33_18090 IPR000292 Formate/nitrite transporter BED33_18100 IPR011010 DNA breaking-rejoining enzyme, catalytic core BED33_18100 IPR013762 Integrase-like, catalytic domain superfamily BED33_18100 IPR002104 Integrase, catalytic domain BED33_18100 IPR038488 Integrase, DNA-binding domain superfamily BED33_18100 IPR025166 Integrase, DNA-binding domain BED33_18100 IPR010998 Integrase/recombinase, N-terminal BED33_18100 IPR004107 Integrase, SAM-like, N-terminal BED33_18160 IPR004624 PhnA protein BED33_18160 IPR013988 PhnA protein, C-terminal BED33_18160 IPR013987 PhnA protein, N-terminal BED33_18165 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_18165 IPR036390 Winged helix DNA-binding domain superfamily BED33_18165 IPR005149 Transcription regulator PadR, N-terminal BED33_18175 IPR017853 Glycoside hydrolase superfamily BED33_18175 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site BED33_18175 IPR018120 Glycoside hydrolase family 1, active site BED33_18175 IPR001360 Glycoside hydrolase family 1 BED33_18180 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component BED33_18180 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site BED33_18180 IPR003352 Phosphotransferase system, EIIC BED33_18180 IPR013013 Phosphotransferase system, EIIC component, type 1 BED33_18180 IPR001996 Phosphotransferase system, IIB component, type 1 BED33_18180 IPR036878 Glucose permease domain IIB BED33_18185 IPR028082 Periplasmic binding protein-like I BED33_18185 IPR000843 LacI-type HTH domain BED33_18185 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BED33_18190 IPR023480 Uncharacterised protein family UPF0312/YceI BED33_18190 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily BED33_18190 IPR007372 Lipid/polyisoprenoid-binding, YceI-like BED33_18195 IPR016174 Di-haem cytochrome, transmembrane BED33_18195 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase BED33_18200 IPR013094 Alpha/beta hydrolase fold-3 BED33_18200 IPR013830 SGNH hydrolase-type esterase domain BED33_18200 IPR036514 SGNH hydrolase superfamily BED33_18200 IPR029058 Alpha/Beta hydrolase fold BED33_18220 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_18220 IPR003439 ABC transporter-like BED33_18220 IPR017871 ABC transporter, conserved site BED33_18220 IPR003593 AAA+ ATPase domain BED33_18220 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl BED33_18225 IPR030802 ABC transporter permease MalE BED33_18225 IPR003453 ABC transport permease subunit MlaE, Proteobacteria BED33_18230 IPR011701 Major facilitator superfamily BED33_18230 IPR036259 MFS transporter superfamily BED33_18230 IPR020846 Major facilitator superfamily domain BED33_18240 IPR011059 Metal-dependent hydrolase, composite domain superfamily BED33_18240 IPR033932 YtcJ like BED33_18240 IPR032466 Metal-dependent hydrolase BED33_18240 IPR013108 Amidohydrolase 3 BED33_18245 IPR004841 Amino acid permease/ SLC12A domain BED33_18250 IPR011757 Lytic transglycosylase MltB BED33_18250 IPR031304 Transglycosylase SLT domain 2 BED33_18250 IPR023346 Lysozyme-like domain superfamily BED33_18255 IPR026045 Ferric binding protein BED33_18255 IPR006061 Solute-binding family 1, conserved site BED33_18260 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED33_18260 IPR035906 MetI-like superfamily BED33_18265 IPR017871 ABC transporter, conserved site BED33_18265 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_18265 IPR030287 Fe(3+) ions import ATP-binding protein FbpC BED33_18265 IPR015853 ABC transporter, ferric cation import, FbpC BED33_18265 IPR003439 ABC transporter-like BED33_18265 IPR003593 AAA+ ATPase domain BED33_18280 IPR035069 TTHA1013/TTHA0281-like BED33_18285 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase BED33_18285 IPR016174 Di-haem cytochrome, transmembrane BED33_18290 IPR004839 Aminotransferase, class I/classII BED33_18290 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED33_18290 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED33_18290 IPR015424 Pyridoxal phosphate-dependent transferase BED33_18300 IPR027443 Isopenicillin N synthase-like BED33_18300 IPR010856 Protein of unknown function DUF1479 BED33_18310 IPR001789 Signal transduction response regulator, receiver domain BED33_18310 IPR011006 CheY-like superfamily BED33_18310 IPR007492 LytTR DNA-binding domain BED33_18320 IPR003836 Glucokinase BED33_18330 IPR005119 LysR, substrate-binding BED33_18330 IPR000847 Transcription regulator HTH, LysR BED33_18330 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_18330 IPR036390 Winged helix DNA-binding domain superfamily BED33_18335 IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme BED33_18335 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding BED33_18335 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain BED33_18335 IPR017764 Indole-3-pyruvate decarboxylase, Enterobacteriaceae BED33_18335 IPR029061 Thiamin diphosphate-binding fold BED33_18335 IPR012000 Thiamine pyrophosphate enzyme, central domain BED33_18335 IPR029035 DHS-like NAD/FAD-binding domain superfamily BED33_18335 IPR000399 TPP-binding enzyme, conserved site BED33_18340 IPR023210 NADP-dependent oxidoreductase domain BED33_18340 IPR036812 NADP-dependent oxidoreductase domain superfamily BED33_18355 IPR008276 Concentrative nucleoside transporter BED33_18355 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial BED33_18355 IPR002668 Concentrative nucleoside transporter N-terminal domain BED33_18355 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain BED33_18355 IPR011657 Concentrative nucleoside transporter C-terminal domain BED33_18385 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain BED33_18385 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED33_18385 IPR033910 Glutamyl-tRNA synthetase BED33_18385 IPR000924 Glutamyl/glutaminyl-tRNA synthetase BED33_18385 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial BED33_18385 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site BED33_18385 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding BED33_18385 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 BED33_18410 IPR024530 Putative quorum-sensing-regulated virulence factor BED33_18415 IPR041663 DisA/LigA, helix-hairpin-helix motif BED33_18415 IPR004150 NAD-dependent DNA ligase, OB-fold BED33_18415 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 BED33_18415 IPR036420 BRCT domain superfamily BED33_18415 IPR010994 RuvA domain 2-like BED33_18415 IPR001357 BRCT domain BED33_18415 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type BED33_18415 IPR012340 Nucleic acid-binding, OB-fold BED33_18415 IPR013839 NAD-dependent DNA ligase, adenylation BED33_18415 IPR001679 NAD-dependent DNA ligase BED33_18415 IPR018239 NAD-dependent DNA ligase, active site BED33_18415 IPR013840 NAD-dependent DNA ligase, N-terminal BED33_18415 IPR033136 NAD-dependent DNA ligase, conserved site BED33_18420 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily BED33_18420 IPR007449 ZipA, C-terminal FtsZ-binding domain BED33_18420 IPR011919 Cell division protein ZipA BED33_18425 IPR022985 Sulfate transporter CysZ BED33_18430 IPR005856 Cysteine synthase BED33_18430 IPR005859 Cysteine synthase CysK BED33_18430 IPR001926 Pyridoxal-phosphate dependent enzyme BED33_18430 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BED33_18430 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site BED33_18435 IPR000032 Phosphocarrier protein HPr-like BED33_18435 IPR002114 Phosphotransferase system, HPr serine phosphorylation site BED33_18435 IPR035895 HPr-like superfamily BED33_18435 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site BED33_18440 IPR024692 Phosphotransferase system, enzyme I BED33_18440 IPR006318 Phosphotransferase system, enzyme I-like BED33_18440 IPR036618 PtsI, HPr-binding domain superfamily BED33_18440 IPR008279 PEP-utilising enzyme, mobile domain BED33_18440 IPR018274 PEP-utilising enzyme, active site BED33_18440 IPR000121 PEP-utilising enzyme, C-terminal BED33_18440 IPR023151 PEP-utilising enzyme, conserved site BED33_18440 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily BED33_18440 IPR040442 Pyruvate kinase-like domain superfamily BED33_18440 IPR036637 Phosphohistidine domain superfamily BED33_18440 IPR008731 Phosphotransferase system, enzyme I N-terminal BED33_18445 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 BED33_18445 IPR011055 Duplicated hybrid motif BED33_18450 IPR038515 CpxA, periplasmic domain superfamily BED33_18450 IPR032404 Two-component sensor protein CpxA, periplasmic domain BED33_18450 IPR003594 Histidine kinase/HSP90-like ATPase BED33_18450 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BED33_18450 IPR005467 Histidine kinase domain BED33_18450 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BED33_18450 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BED33_18450 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BED33_18450 IPR003660 HAMP domain BED33_18455 IPR039420 Transcriptional regulatory protein WalR-like BED33_18455 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_18455 IPR011006 CheY-like superfamily BED33_18455 IPR001867 OmpR/PhoB-type DNA-binding domain BED33_18455 IPR001789 Signal transduction response regulator, receiver domain BED33_18460 IPR006143 RND efflux pump, membrane fusion protein BED33_18460 IPR030190 Macrolide export protein MacA BED33_18460 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BED33_18465 IPR025857 MacB-like periplasmic core domain BED33_18465 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_18465 IPR003439 ABC transporter-like BED33_18465 IPR003838 ABC transporter permease protein domain BED33_18465 IPR003593 AAA+ ATPase domain BED33_18465 IPR017911 ABC transporter, macrolide export, ATP-binding domain BED33_18465 IPR017871 ABC transporter, conserved site BED33_18470 IPR005856 Cysteine synthase BED33_18470 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site BED33_18470 IPR001926 Pyridoxal-phosphate dependent enzyme BED33_18470 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BED33_18470 IPR005858 Cysteine synthase CysM BED33_18475 IPR005666 Sulphate transport system permease protein 1 BED33_18475 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_18475 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal BED33_18475 IPR008995 Molybdate/tungstate binding, C-terminal BED33_18475 IPR003593 AAA+ ATPase domain BED33_18475 IPR017871 ABC transporter, conserved site BED33_18475 IPR003439 ABC transporter-like BED33_18480 IPR011866 Sulphate ABC transporter, permease protein CysW BED33_18480 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED33_18480 IPR035906 MetI-like superfamily BED33_18480 IPR005667 Sulphate ABC transporter permease protein 2 BED33_18485 IPR005667 Sulphate ABC transporter permease protein 2 BED33_18485 IPR035906 MetI-like superfamily BED33_18485 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED33_18485 IPR011865 Sulphate ABC transporter, permease protein CysT BED33_18490 IPR000957 Sulphate/thiosulphate-binding, conserved site BED33_18490 IPR034408 Sulphate/thiosulphate-binding site BED33_18490 IPR005669 Thiosulphate/Sulfate-binding protein BED33_18495 IPR011701 Major facilitator superfamily BED33_18495 IPR036259 MFS transporter superfamily BED33_18495 IPR004742 Sialic acid transporter BED33_18495 IPR020846 Major facilitator superfamily domain BED33_18500 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_18500 IPR035472 RpiR-like, SIS domain BED33_18500 IPR000281 Helix-turn-helix protein RpiR BED33_18500 IPR009057 Homeobox-like domain superfamily BED33_18500 IPR001347 Sugar isomerase (SIS) BED33_18505 IPR037012 YhcH/YjgK/YiaL superfamily BED33_18505 IPR004375 YhcH/YjgK/YiaL family BED33_18510 IPR023945 N-acetylmannosamine kinase, bacterial BED33_18510 IPR000600 ROK family BED33_18515 IPR011060 Ribulose-phosphate binding barrel BED33_18515 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase BED33_18515 IPR013785 Aldolase-type TIM barrel BED33_18520 IPR020625 Schiff base-forming aldolase, active site BED33_18520 IPR002220 DapA-like BED33_18520 IPR013785 Aldolase-type TIM barrel BED33_18520 IPR005264 N-acetylneuraminate lyase BED33_18525 IPR003346 Transposase, IS116/IS110/IS902 BED33_18525 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED33_18530 IPR006314 Dyp-type peroxidase BED33_18530 IPR011008 Dimeric alpha-beta barrel BED33_18535 IPR010938 Protein of unknown function DUF1131 BED33_18535 IPR038714 YfeY-like superfamily BED33_18540 IPR036700 Bacterial OB-fold superfamily BED33_18540 IPR016052 Bacteriophage 933W, L0136 BED33_18540 IPR005220 Bacterial OB-fold BED33_18545 IPR023072 Acetyltransferase, YpeA BED33_18545 IPR016181 Acyl-CoA N-acyltransferase BED33_18545 IPR000182 GNAT domain BED33_18550 IPR001260 Coproporphyrinogen III oxidase, aerobic BED33_18550 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily BED33_18550 IPR018375 Coproporphyrinogen III oxidase, conserved site BED33_18555 IPR003791 Protein of unknown function UPF0178 BED33_18565 IPR037062 Malic enzyme, N-terminal domain superfamily BED33_18565 IPR015884 Malic enzyme, conserved site BED33_18565 IPR012302 Malic enzyme, NAD-binding BED33_18565 IPR012301 Malic enzyme, N-terminal domain BED33_18565 IPR042112 Phosphate acetyltransferase, domain 2 BED33_18565 IPR002505 Phosphate acetyl/butaryl transferase BED33_18565 IPR036291 NAD(P)-binding domain superfamily BED33_18565 IPR012188 NAD(P)-dependent malic enzyme BED33_18565 IPR042113 Phosphate acetyltransferase, domain 1 BED33_18570 IPR015797 NUDIX hydrolase-like domain superfamily BED33_18570 IPR000086 NUDIX hydrolase domain BED33_18570 IPR004385 Nucleoside diphosphate pyrophosphatase BED33_18580 IPR011031 Multihaem cytochrome BED33_18580 IPR005591 Nitrate reductase cytochrome c-type subunit NapB BED33_18580 IPR036280 Multiheme cytochrome superfamily BED33_18585 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site BED33_18585 IPR010051 Periplasmic nitrate reductase, large subunit BED33_18585 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain BED33_18585 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal BED33_18585 IPR006656 Molybdopterin oxidoreductase BED33_18585 IPR006657 Molybdopterin dinucleotide-binding domain BED33_18585 IPR041957 Nitrate reductase NapA-like, molybdopterin-binding domain BED33_18585 IPR009010 Aspartate decarboxylase-like domain superfamily BED33_18585 IPR006311 Twin-arginine translocation pathway, signal sequence BED33_18590 IPR005623 Chaperone NapD, nitrate reductase assembly BED33_18600 IPR001789 Signal transduction response regulator, receiver domain BED33_18600 IPR000792 Transcription regulator LuxR, C-terminal BED33_18600 IPR011006 CheY-like superfamily BED33_18600 IPR016032 Signal transduction response regulator, C-terminal effector BED33_18610 IPR001036 Acriflavin resistance protein BED33_18610 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BED33_18610 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 BED33_18630 IPR036249 Thioredoxin-like superfamily BED33_18630 IPR006504 Transcriptional regulator Spx/MgsR BED33_18630 IPR006660 Arsenate reductase-like BED33_18635 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site BED33_18635 IPR036264 Bacterial exopeptidase dimerisation domain BED33_18635 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria BED33_18635 IPR002933 Peptidase M20 BED33_18635 IPR011650 Peptidase M20, dimerisation domain BED33_18640 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily BED33_18640 IPR003709 Peptidase M15B BED33_18645 IPR020910 Uncharacterised protein family UPF0370 BED33_18660 IPR027385 Outer membrane protein beta-barrel domain BED33_18660 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel BED33_18660 IPR000758 Virulence-related outer membrane protein BED33_18675 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED33_18675 IPR003346 Transposase, IS116/IS110/IS902 BED33_18680 IPR004929 Spanin, inner membrane subunit BED33_18685 IPR029058 Alpha/Beta hydrolase fold BED33_18685 IPR003140 Phospholipase/carboxylesterase/thioesterase BED33_18700 IPR016181 Acyl-CoA N-acyltransferase BED33_18700 IPR000182 GNAT domain BED33_18700 IPR007807 Helicase domain BED33_18700 IPR032672 TmcA/NAT10/Kre33 BED33_18700 IPR038321 TmcA, C-terminal domain superfamily BED33_18700 IPR033442 tRNA(Met) cytidine acetyltransferase TmcA, tRNA-binding domain BED33_18700 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA BED33_18700 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_18705 IPR007382 Uncharacterised protein family UPF0756, transmembrame BED33_18710 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative BED33_18715 IPR028923 SAICAR synthetase/ADE2, N-terminal BED33_18715 IPR033934 Bacterial and archaeal 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide synthase BED33_18715 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase BED33_18715 IPR018236 SAICAR synthetase, conserved site BED33_18720 IPR010653 NlpB/DapX lipoprotein BED33_18720 IPR014524 Outer membrane protein assembly factor BamC BED33_18720 IPR042268 Outer membrane protein assembly factor BamC, C-terminal BED33_18725 IPR020625 Schiff base-forming aldolase, active site BED33_18725 IPR002220 DapA-like BED33_18725 IPR013785 Aldolase-type TIM barrel BED33_18725 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA BED33_18725 IPR020624 Schiff base-forming aldolase, conserved site BED33_18730 IPR016867 Glycine cleavage system transcriptional repressor BED33_18730 IPR002912 ACT domain BED33_18735 IPR024706 Peroxiredoxin, AhpC-type BED33_18735 IPR013766 Thioredoxin domain BED33_18735 IPR036249 Thioredoxin-like superfamily BED33_18735 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant BED33_18740 IPR002549 Transmembrane protein TqsA-like BED33_18745 IPR011990 Tetratricopeptide-like helical domain superfamily BED33_18745 IPR011716 Tetratricopeptide TPR-3 BED33_18745 IPR030873 Beta-barrel assembly-enhancing protease BED33_18745 IPR001915 Peptidase M48 BED33_18750 IPR036249 Thioredoxin-like superfamily BED33_18750 IPR006660 Arsenate reductase-like BED33_18750 IPR006659 Arsenate reductase BED33_18755 IPR020591 Chromosomal replication control, initiator DnaA-like BED33_18755 IPR013317 Chromosomal replication initiator protein DnaA BED33_18755 IPR017788 DnaA regulatory inactivator Hda BED33_18755 IPR022864 DnaA regulatory inactivator Hda, Enterobacteriaceae BED33_18755 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_18760 IPR006043 Xanthine/uracil/vitamin C permease BED33_18760 IPR006042 Xanthine/uracil permease BED33_18760 IPR029935 Uracil permease BED33_18765 IPR005765 Uracil phosphoribosyl transferase BED33_18765 IPR000836 Phosphoribosyltransferase domain BED33_18765 IPR029057 Phosphoribosyltransferase-like BED33_18765 IPR034332 Uracil phosphoribosyltransferase, bacterial-type BED33_18775 IPR001555 Phosphoribosylglycinamide formyltransferase, active site BED33_18775 IPR004607 Phosphoribosylglycinamide formyltransferase BED33_18775 IPR036477 Formyl transferase, N-terminal domain superfamily BED33_18775 IPR002376 Formyl transferase, N-terminal BED33_18780 IPR000182 GNAT domain BED33_18780 IPR016181 Acyl-CoA N-acyltransferase BED33_18790 IPR005670 Phosphate transport system permease protein 1 BED33_18790 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_18790 IPR015850 ABC transporter, phosphate import, PstB BED33_18790 IPR003439 ABC transporter-like BED33_18790 IPR003593 AAA+ ATPase domain BED33_18790 IPR017871 ABC transporter, conserved site BED33_18795 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED33_18795 IPR035906 MetI-like superfamily BED33_18795 IPR005672 Phosphate transport system permease protein PstA BED33_18800 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED33_18800 IPR011864 Phosphate ABC transporter, permease protein PstC BED33_18800 IPR035906 MetI-like superfamily BED33_18805 IPR001736 Phospholipase D/Transphosphatidylase BED33_18805 IPR024953 Polyphosphate kinase middle domain BED33_18805 IPR036830 Polyphosphate kinase middle domain superfamily BED33_18805 IPR041108 Polyphosphate kinase, C-terminal domain 1 BED33_18805 IPR025200 Polyphosphate kinase C-terminal domain 2 BED33_18805 IPR003414 Polyphosphate kinase BED33_18805 IPR025198 Polyphosphate kinase N-terminal domain BED33_18805 IPR036832 Polyphosphate kinase N-terminal domain superfamily BED33_18810 IPR030673 Pyrophosphatase, GppA/Ppx-type BED33_18810 IPR003695 Ppx/GppA phosphatase BED33_18810 IPR022371 Exopolyphosphatase BED33_18825 IPR007895 MASE1 BED33_18825 IPR000160 GGDEF domain BED33_18825 IPR035919 EAL domain superfamily BED33_18825 IPR001633 EAL domain BED33_18825 IPR029787 Nucleotide cyclase BED33_18825 IPR001610 PAC motif BED33_18825 IPR000014 PAS domain BED33_18825 IPR000700 PAS-associated, C-terminal BED33_18825 IPR013655 PAS fold-3 BED33_18825 IPR013656 PAS fold-4 BED33_18825 IPR035965 PAS domain superfamily BED33_18830 IPR018181 Heat shock protein 70, conserved site BED33_18830 IPR013126 Heat shock protein 70 family BED33_18830 IPR042054 YegD-like BED33_18835 IPR039562 Membrane fusion protein, biotin-lipoyl like domain BED33_18835 IPR022824 Multidrug resistance protein MdtA BED33_18835 IPR006143 RND efflux pump, membrane fusion protein BED33_18840 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BED33_18840 IPR001036 Acriflavin resistance protein BED33_18840 IPR022831 Multidrug resistance protein MdtB BED33_18845 IPR023931 Multidrug resistance protein MdtC BED33_18845 IPR001036 Acriflavin resistance protein BED33_18845 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BED33_18850 IPR036259 MFS transporter superfamily BED33_18850 IPR020846 Major facilitator superfamily domain BED33_18850 IPR011701 Major facilitator superfamily BED33_18850 IPR023721 Multidrug resistance protein MdtD BED33_18855 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BED33_18855 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BED33_18855 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BED33_18855 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BED33_18855 IPR005467 Histidine kinase domain BED33_18855 IPR003594 Histidine kinase/HSP90-like ATPase BED33_18855 IPR003660 HAMP domain BED33_18860 IPR001789 Signal transduction response regulator, receiver domain BED33_18860 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_18860 IPR039420 Transcriptional regulatory protein WalR-like BED33_18860 IPR016032 Signal transduction response regulator, C-terminal effector BED33_18860 IPR011006 CheY-like superfamily BED33_18860 IPR001867 OmpR/PhoB-type DNA-binding domain BED33_18865 IPR036913 YegP-like superfamily BED33_18865 IPR010879 Domain of unknown function DUF1508 BED33_18875 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal BED33_18875 IPR005218 Diacylglycerol/lipid kinase BED33_18875 IPR001206 Diacylglycerol kinase, catalytic domain BED33_18875 IPR022433 Lipid kinase YegS BED33_18875 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily BED33_18880 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor BED33_18885 IPR011638 Sorbitol phosphotransferase enzyme II, C-terminal BED33_18885 IPR004702 Phosphotransferease, sorbitol phosphotransferase enzyme II BED33_18885 IPR011618 Sorbitol phosphotransferase enzyme II, N-terminal BED33_18890 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component BED33_18890 IPR036665 Phosphotransferase system, glucitol/sorbitol-specific IIA component superfamily BED33_18890 IPR018454 Phosphotransferase system, glucitol/sorbitol-specific IIA component, subgroup BED33_18895 IPR020904 Short-chain dehydrogenase/reductase, conserved site BED33_18895 IPR002347 Short-chain dehydrogenase/reductase SDR BED33_18895 IPR036291 NAD(P)-binding domain superfamily BED33_18900 IPR009693 Glucitol operon activator BED33_18905 IPR037171 NagB/RpiA transferase-like BED33_18905 IPR001034 DeoR-type HTH domain BED33_18905 IPR014036 DeoR C-terminal sensor domain BED33_18905 IPR036390 Winged helix DNA-binding domain superfamily BED33_18905 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_18905 IPR018356 Transcription regulator, HTH DeoR-type, conserved site BED33_18910 IPR000644 CBS domain BED33_18910 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type BED33_18910 IPR001347 Sugar isomerase (SIS) BED33_18910 IPR035474 KpsF-like, SIS domain BED33_18915 IPR014453 Inhibitor of vertebrate lysozyme BED33_18915 IPR036501 Inhibitor of vertebrate lysozyme superfamily BED33_18925 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase BED33_18925 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase BED33_18925 IPR029056 Ribokinase-like BED33_18955 IPR001207 Transposase, mutator type BED33_18995 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED33_18995 IPR003346 Transposase, IS116/IS110/IS902 BED33_19000 IPR009056 Cytochrome c-like domain BED33_19000 IPR036909 Cytochrome c-like domain superfamily BED33_19000 IPR008168 Cytochrome c, class IC BED33_19000 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit BED33_19020 IPR001674 GMP synthase, C-terminal BED33_19020 IPR022310 NAD/GMP synthase BED33_19020 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED33_19020 IPR004739 GMP synthase, glutamine amidotransferase BED33_19020 IPR022955 GMP synthase BED33_19020 IPR025777 GMP synthetase ATP pyrophosphatase domain BED33_19020 IPR017926 Glutamine amidotransferase BED33_19020 IPR029062 Class I glutamine amidotransferase-like BED33_19025 IPR000644 CBS domain BED33_19025 IPR015875 IMP dehydrogenase / GMP reductase, conserved site BED33_19025 IPR001093 IMP dehydrogenase/GMP reductase BED33_19025 IPR013785 Aldolase-type TIM barrel BED33_19025 IPR005990 Inosine-5'-monophosphate dehydrogenase BED33_19030 IPR025824 OB-fold nucleic acid binding domain BED33_19030 IPR003753 Exonuclease VII, large subunit BED33_19030 IPR020579 Exonuclease VII, large subunit, C-terminal BED33_19035 IPR010807 Protein of unknown function DUF1407 BED33_19035 IPR029037 YfgJ-like BED33_19045 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED33_19045 IPR003346 Transposase, IS116/IS110/IS902 BED33_19050 IPR031166 EngA-type guanine nucleotide-binding (G) domain BED33_19050 IPR005225 Small GTP-binding protein domain BED33_19050 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_19050 IPR015946 K homology domain-like, alpha/beta BED33_19050 IPR032859 GTPase Der, C-terminal KH-domain-like BED33_19050 IPR016484 GTP-binding protein EngA BED33_19050 IPR006073 GTP binding domain BED33_19060 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily BED33_19060 IPR015943 WD40/YVTN repeat-like-containing domain superfamily BED33_19060 IPR017687 Outer membrane protein assembly factor BamB BED33_19060 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BED33_19060 IPR002372 Pyrrolo-quinoline quinone repeat BED33_19070 IPR036621 Anticodon-binding domain superfamily BED33_19070 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain BED33_19070 IPR015807 Histidine-tRNA ligase BED33_19070 IPR033656 Histidyl-anticodon-binding BED33_19070 IPR004154 Anticodon-binding BED33_19070 IPR006195 Aminoacyl-tRNA synthetase, class II BED33_19070 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit BED33_19075 IPR011005 Dihydropteroate synthase-like BED33_19075 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type BED33_19075 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial BED33_19080 IPR001387 Cro/C1-type helix-turn-helix domain BED33_19080 IPR023690 Cytoskeleton protein RodZ BED33_19080 IPR025194 Domain of unknown function DUF4115 BED33_19080 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BED33_19090 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr BED33_19090 IPR027492 Dual-specificity RNA methyltransferase RlmN BED33_19090 IPR007197 Radical SAM BED33_19090 IPR013785 Aldolase-type TIM barrel BED33_19090 IPR040072 Methyltransferase (Class A) BED33_19095 IPR034907 Nucleoside diphosphate kinase-like domain BED33_19095 IPR023005 Nucleoside diphosphate kinase, active site BED33_19095 IPR001564 Nucleoside diphosphate kinase BED33_19095 IPR036850 Nucleoside diphosphate kinase-like domain superfamily BED33_19105 IPR001460 Penicillin-binding protein, transpeptidase BED33_19105 IPR036950 Penicillin binding protein transglycosylase domain BED33_19105 IPR012338 Beta-lactamase/transpeptidase-like BED33_19105 IPR001264 Glycosyl transferase, family 51 BED33_19105 IPR023346 Lysozyme-like domain superfamily BED33_19105 IPR011815 Penicillin-binding protein 1C BED33_19105 IPR009647 Penicillin-binding, C-terminal BED33_19110 IPR040639 Alpha-2-macroglobulin, MG1 domain BED33_19110 IPR011626 Alpha-macroglobulin-like, TED domain BED33_19110 IPR026284 Alpha-2-macroglobulin, bacteria BED33_19110 IPR041203 Bacterial Alpha-2-macroglobulin, MG5 domain BED33_19110 IPR041246 Bacterial alpha-2-macroglobulin MG10 domain BED33_19110 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid BED33_19110 IPR002890 Macroglobulin domain BED33_19110 IPR021868 Alpha-2-macroglobulin MG3 domain BED33_19110 IPR011625 Alpha-2-macroglobulin, bait region domain BED33_19110 IPR041462 Bacterial Alpha-2-macroglobulin, MG6 domain BED33_19110 IPR001599 Alpha-2-macroglobulin BED33_19115 IPR006315 Outer membrane autotransporter barrel BED33_19115 IPR003991 Pertactin virulence factor family BED33_19115 IPR030930 Adhesin of bacterial autotransporter system BED33_19115 IPR012332 P22 tailspike-like, C-terminal domain superfamily BED33_19115 IPR005546 Autotransporter beta-domain BED33_19115 IPR036709 Autotransporter beta-domain superfamily BED33_19115 IPR011050 Pectin lyase fold/virulence factor BED33_19115 IPR004899 Pertactin, central region BED33_19120 IPR009839 SseB protein N-terminal domain BED33_19120 IPR027945 SseB protein, C-terminal BED33_19125 IPR001346 Interferon regulatory factor DNA-binding domain BED33_19125 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B BED33_19125 IPR008330 Peptidase M17, peptidase B BED33_19125 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal BED33_19130 IPR036762 IscX-like superfamily BED33_19130 IPR007479 ISC system FeS cluster assembly, IscX BED33_19135 IPR036010 2Fe-2S ferredoxin-like superfamily BED33_19135 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria BED33_19135 IPR012675 Beta-grasp domain superfamily BED33_19135 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain BED33_19135 IPR001055 Adrenodoxin BED33_19135 IPR018298 Adrenodoxin, iron-sulphur binding site BED33_19140 IPR018181 Heat shock protein 70, conserved site BED33_19140 IPR042039 HscA chaperone, nucleotide-binding domain BED33_19140 IPR010236 ISC system FeS cluster assembly, HscA chaperone BED33_19140 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily BED33_19140 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily BED33_19140 IPR013126 Heat shock protein 70 family BED33_19145 IPR036869 Chaperone J-domain superfamily BED33_19145 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain BED33_19145 IPR036386 HscB, C-terminal domain superfamily BED33_19145 IPR004640 Co-chaperone Hsc20 BED33_19145 IPR001623 DnaJ domain BED33_19150 IPR011302 Iron-binding protein IscA, proteobacteria BED33_19150 IPR016092 FeS cluster insertion protein BED33_19150 IPR035903 HesB-like domain superfamily BED33_19150 IPR017870 FeS cluster insertion, C-terminal, conserved site BED33_19150 IPR000361 FeS cluster biogenesis BED33_19155 IPR011339 ISC system FeS cluster assembly, IscU scaffold BED33_19155 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal BED33_19160 IPR016454 Cysteine desulfurase BED33_19160 IPR010240 Cysteine desulfurase IscS BED33_19160 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site BED33_19160 IPR000192 Aminotransferase class V domain BED33_19160 IPR015424 Pyridoxal phosphate-dependent transferase BED33_19160 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED33_19160 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED33_19165 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_19165 IPR036390 Winged helix DNA-binding domain superfamily BED33_19165 IPR000944 Transcription regulator Rrf2-type BED33_19165 IPR030489 Transcription regulator Rrf2-type, conserved site BED33_19165 IPR010242 Transcription factor HTH, IscR BED33_19170 IPR001537 tRNA/rRNA methyltransferase, SpoU type BED33_19170 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BED33_19170 IPR029028 Alpha/beta knot methyltransferases BED33_19170 IPR004384 RNA methyltransferase TrmJ/LasT BED33_19175 IPR020550 Inositol monophosphatase, conserved site BED33_19175 IPR000760 Inositol monophosphatase-like BED33_19175 IPR020583 Inositol monophosphatase, metal-binding site BED33_19175 IPR022337 Inositol monophosphatase, SuhB BED33_19175 IPR033942 Inositol monophosphatase BED33_19180 IPR011541 Nickel/cobalt transporter, high-affinity BED33_19185 IPR010412 Protein of unknown function DUF1007 BED33_19185 IPR016537 Uncharacterised conserved protein UCP008159, BED33_19195 IPR036259 MFS transporter superfamily BED33_19195 IPR026032 Probable 3-phenylpropionic acid transporter BED33_19195 IPR024989 Major facilitator superfamily associated domain BED33_19200 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED33_19200 IPR001085 Serine hydroxymethyltransferase BED33_19200 IPR039429 Serine hydroxymethyltransferase-like domain BED33_19200 IPR015424 Pyridoxal phosphate-dependent transferase BED33_19200 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED33_19200 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site BED33_19205 IPR017938 Riboflavin synthase-like beta-barrel BED33_19205 IPR001433 Oxidoreductase FAD/NAD(P)-binding BED33_19205 IPR012292 Globin/Protoglobin BED33_19205 IPR009050 Globin-like superfamily BED33_19205 IPR023950 Flavohemoprotein BED33_19205 IPR000971 Globin BED33_19205 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase BED33_19205 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BED33_19205 IPR017927 FAD-binding domain, ferredoxin reductase-type BED33_19205 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain BED33_19210 IPR041444 YhfZ, helix-turn-helix domain BED33_19210 IPR032791 Uncharacterised protein YhfZ, C-terminal domain BED33_19215 IPR036634 PRD domain superfamily BED33_19215 IPR011608 PRD domain BED33_19220 IPR029066 PLP-binding barrel BED33_19220 IPR001608 Alanine racemase, N-terminal BED33_19225 IPR017947 Aryldialkylphosphatase, zinc-binding site BED33_19225 IPR032466 Metal-dependent hydrolase BED33_19225 IPR001559 Phosphotriesterase BED33_19230 IPR021238 Protein of unknown function DUF2620 BED33_19235 IPR019733 Uncharacterised protein family YhfT BED33_19240 IPR002332 Nitrogen regulatory protein P-II, urydylation site BED33_19240 IPR017918 Nitrogen regulatory protein PII, conserved site BED33_19240 IPR002187 Nitrogen regulatory protein PII BED33_19240 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BED33_19240 IPR011322 Nitrogen regulatory PII-like, alpha/beta BED33_19245 IPR022310 NAD/GMP synthase BED33_19245 IPR014445 Glutamine-dependent NAD(+) synthetase BED33_19245 IPR036526 Carbon-nitrogen hydrolase superfamily BED33_19245 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED33_19245 IPR003694 NAD(+) synthetase BED33_19245 IPR003010 Carbon-nitrogen hydrolase BED33_19245 IPR000132 Nitrilase/cyanide hydratase, conserved site BED33_19250 IPR002078 RNA polymerase sigma factor 54 interaction domain BED33_19250 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BED33_19250 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BED33_19250 IPR025944 Sigma-54 interaction domain, conserved site BED33_19250 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_19250 IPR009057 Homeobox-like domain superfamily BED33_19250 IPR011006 CheY-like superfamily BED33_19250 IPR003593 AAA+ ATPase domain BED33_19250 IPR001789 Signal transduction response regulator, receiver domain BED33_19255 IPR025262 Quorum-sensing regulator protein G BED33_19260 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BED33_19260 IPR005467 Histidine kinase domain BED33_19260 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BED33_19260 IPR003594 Histidine kinase/HSP90-like ATPase BED33_19260 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BED33_19260 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BED33_19270 IPR010918 PurM-like, C-terminal domain BED33_19270 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily BED33_19270 IPR036921 PurM-like, N-terminal domain superfamily BED33_19270 IPR036676 PurM-like, C-terminal domain superfamily BED33_19270 IPR040707 Phosphoribosylformylglycinamidine synthase, N-terminal BED33_19270 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain BED33_19270 IPR029062 Class I glutamine amidotransferase-like BED33_19270 IPR010073 Phosphoribosylformylglycinamidine synthase PurL BED33_19270 IPR017926 Glutamine amidotransferase BED33_19275 IPR023703 Membrane-bound lytic murein transglycosylase F BED33_19275 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BED33_19275 IPR000189 Prokaryotic transglycosylase, active site BED33_19275 IPR008258 Transglycosylase SLT domain 1 BED33_19275 IPR023346 Lysozyme-like domain superfamily BED33_19280 IPR002125 Cytidine and deoxycytidylate deaminase domain BED33_19280 IPR016192 APOBEC/CMP deaminase, zinc-binding BED33_19280 IPR016193 Cytidine deaminase-like BED33_19280 IPR028883 tRNA-specific adenosine deaminase BED33_19290 IPR036412 HAD-like superfamily BED33_19290 IPR023214 HAD superfamily BED33_19290 IPR006435 HAD-superfamily hydrolase, subfamily IF, YfhB BED33_19295 IPR001347 Sugar isomerase (SIS) BED33_19295 IPR005486 Glucokinase regulatory protein, conserved site BED33_19295 IPR040190 N-acetylmuramic acid 6-phosphate etherase/glucokinase regulatory protein BED33_19295 IPR009060 UBA-like superfamily BED33_19295 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ BED33_19300 IPR001347 Sugar isomerase (SIS) BED33_19300 IPR009057 Homeobox-like domain superfamily BED33_19300 IPR000281 Helix-turn-helix protein RpiR BED33_19300 IPR035472 RpiR-like, SIS domain BED33_19300 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_19305 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BED33_19305 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BED33_19315 IPR004568 Phosphopantetheine-protein transferase domain BED33_19315 IPR037143 4'-phosphopantetheinyl transferase domain superfamily BED33_19315 IPR002582 Holo-[acyl carrier protein] synthase BED33_19315 IPR008278 4'-phosphopantetheinyl transferase domain BED33_19320 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ BED33_19320 IPR013785 Aldolase-type TIM barrel BED33_19320 IPR036130 Pyridoxine 5'-phosphate synthase BED33_19325 IPR003717 Recombination protein O, RecO BED33_19325 IPR012340 Nucleic acid-binding, OB-fold BED33_19325 IPR022572 DNA replication/recombination mediator RecO, N-terminal BED33_19325 IPR037278 ARFGAP/RecO-like zinc finger BED33_19330 IPR030388 Era-type guanine nucleotide-binding (G) domain BED33_19330 IPR005662 GTP-binding protein Era BED33_19330 IPR009019 K homology domain superfamily, prokaryotic type BED33_19330 IPR006073 GTP binding domain BED33_19330 IPR005225 Small GTP-binding protein domain BED33_19330 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_19330 IPR015946 K homology domain-like, alpha/beta BED33_19330 IPR004044 K Homology domain, type 2 BED33_19335 IPR014720 Double-stranded RNA-binding domain BED33_19335 IPR011907 Ribonuclease III BED33_19335 IPR000999 Ribonuclease III domain BED33_19335 IPR036389 Ribonuclease III, endonuclease domain superfamily BED33_19340 IPR019757 Peptidase S26A, signal peptidase I, lysine active site BED33_19340 IPR019758 Peptidase S26A, signal peptidase I, conserved site BED33_19340 IPR019533 Peptidase S26 BED33_19340 IPR036286 LexA/Signal peptidase-like superfamily BED33_19340 IPR019756 Peptidase S26A, signal peptidase I, serine active site BED33_19340 IPR000223 Peptidase S26A, signal peptidase I BED33_19345 IPR000795 Transcription factor, GTP-binding domain BED33_19345 IPR005225 Small GTP-binding protein domain BED33_19345 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_19345 IPR035647 EF-G domain III/V-like BED33_19345 IPR035654 Elongation factor 4, domain IV BED33_19345 IPR038363 LepA, C-terminal domain superfamily BED33_19345 IPR031157 Tr-type G domain, conserved site BED33_19345 IPR004161 Translation elongation factor EFTu-like, domain 2 BED33_19345 IPR000640 Elongation factor EFG, domain V-like BED33_19345 IPR006297 Elongation factor 4 BED33_19345 IPR013842 GTP-binding protein LepA, C-terminal BED33_19355 IPR026268 Protein RseC BED33_19355 IPR007359 Positive regulator of sigma(E), RseC/MucC BED33_19360 IPR038484 MucB/RseB, C-terminal domain superfamily BED33_19360 IPR033434 MucB/RseB, N-terminal BED33_19360 IPR005588 MucB/RseB BED33_19360 IPR033436 MucB/RseB, C-terminal BED33_19365 IPR005573 Anti sigma-E protein RseA, C-terminal BED33_19365 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily BED33_19365 IPR026279 Sigma-E factor negative regulatory protein RseA BED33_19365 IPR005572 Anti sigma-E protein RseA, N-terminal BED33_19370 IPR013324 RNA polymerase sigma factor, region 3/4-like BED33_19370 IPR013325 RNA polymerase sigma factor, region 2 BED33_19370 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_19370 IPR014286 RNA polymerase sigma-70 RpoE type BED33_19370 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 BED33_19370 IPR007627 RNA polymerase sigma-70 region 2 BED33_19370 IPR039425 RNA polymerase sigma-70 like BED33_19370 IPR014284 RNA polymerase sigma-70 like domain BED33_19370 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site BED33_19375 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal BED33_19375 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily BED33_19375 IPR036188 FAD/NAD(P)-binding domain superfamily BED33_19375 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain BED33_19375 IPR005288 L-aspartate oxidase BED33_19375 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily BED33_19380 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase BED33_19380 IPR002052 DNA methylase, N-6 adenine-specific, conserved site BED33_19380 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED33_19380 IPR007848 Methyltransferase small domain BED33_19385 IPR014014 RNA helicase, DEAD-box type, Q motif BED33_19385 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_19385 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site BED33_19385 IPR001650 Helicase, C-terminal BED33_19385 IPR014001 Helicase superfamily 1/2, ATP-binding domain BED33_19385 IPR028621 ATP-dependent RNA helicase SrmB BED33_19385 IPR011545 DEAD/DEAH box helicase domain BED33_19390 IPR003346 Transposase, IS116/IS110/IS902 BED33_19390 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED33_19395 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED33_19395 IPR003346 Transposase, IS116/IS110/IS902 BED33_19400 IPR002110 Ankyrin repeat BED33_19400 IPR020683 Ankyrin repeat-containing domain BED33_19400 IPR036770 Ankyrin repeat-containing domain superfamily BED33_19415 IPR001150 Glycine radical domain BED33_19415 IPR019777 Formate C-acetyltransferase glycine radical, conserved site BED33_19415 IPR011140 Autonomous glycyl radical cofactor GrcA BED33_19420 IPR005122 Uracil-DNA glycosylase-like BED33_19420 IPR002043 Uracil-DNA glycosylase family 1 BED33_19420 IPR036895 Uracil-DNA glycosylase-like domain superfamily BED33_19420 IPR018085 Uracil-DNA glycosylase, active site BED33_19425 IPR000740 GrpE nucleotide exchange factor BED33_19425 IPR013805 GrpE nucleotide exchange factor, coiled-coil BED33_19425 IPR009012 GrpE nucleotide exchange factor, head BED33_19430 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal BED33_19430 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily BED33_19430 IPR002504 NAD kinase BED33_19430 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal BED33_19435 IPR003395 RecF/RecN/SMC, N-terminal BED33_19435 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_19435 IPR004604 DNA recombination/repair protein RecN BED33_19440 IPR026592 Outer membrane protein assembly factor BamE BED33_19440 IPR037873 BamE-like BED33_19440 IPR007450 Lipoprotein SmpA/OmlA BED33_19445 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp BED33_19445 IPR005346 RnfH protein BED33_19445 IPR037021 RnfH superfamily BED33_19450 IPR005031 Coenzyme Q-binding protein COQ10, START domain BED33_19450 IPR023393 START-like domain superfamily BED33_19455 IPR000037 SsrA-binding protein BED33_19455 IPR020081 SsrA-binding protein, conserved site BED33_19455 IPR023620 Small protein B BED33_19470 IPR036513 STAS domain superfamily BED33_19470 IPR002645 STAS domain BED33_19470 IPR001902 SLC26A/SulP transporter BED33_19470 IPR011547 SLC26A/SulP transporter domain BED33_19470 IPR018045 Sulphate anion transporter, conserved site BED33_19475 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel BED33_19475 IPR006879 Carbohydrate deacetylase YdjC-like BED33_19475 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria BED33_19480 IPR018062 HTH domain AraC-type, conserved site BED33_19480 IPR011051 RmlC-like cupin domain superfamily BED33_19480 IPR013096 Cupin 2, conserved barrel BED33_19480 IPR018060 DNA binding HTH domain, AraC-type BED33_19480 IPR014710 RmlC-like jelly roll fold BED33_19480 IPR009057 Homeobox-like domain superfamily BED33_19480 IPR020449 Transcription regulator HTH, AraC- type BED33_19485 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily BED33_19485 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit BED33_19490 IPR017853 Glycoside hydrolase superfamily BED33_19490 IPR018120 Glycoside hydrolase family 1, active site BED33_19490 IPR001360 Glycoside hydrolase family 1 BED33_19495 IPR004796 Phosphotransferase system, cellobiose-type IIC component BED33_19495 IPR004501 Phosphotransferase system, EIIC component, type 3 BED33_19495 IPR003352 Phosphotransferase system, EIIC BED33_19500 IPR013012 Phosphotransferase system, EIIB component, type 3 BED33_19500 IPR003501 Phosphotransferase system, EIIB component, type 2/3 BED33_19500 IPR036095 PTS system IIB component-like superfamily BED33_19510 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED33_19510 IPR003346 Transposase, IS116/IS110/IS902 BED33_19515 IPR023210 NADP-dependent oxidoreductase domain BED33_19515 IPR036812 NADP-dependent oxidoreductase domain superfamily BED33_19520 IPR003691 Putative fluoride ion transporter CrcB BED33_19525 IPR003691 Putative fluoride ion transporter CrcB BED33_19530 IPR003148 Regulator of K+ conductance, N-terminal BED33_19530 IPR036291 NAD(P)-binding domain superfamily BED33_19530 IPR013099 Potassium channel domain BED33_19535 IPR038303 HNS-dependent expression A/B superfamily BED33_19535 IPR028623 HNS-dependent expression B BED33_19535 IPR010486 HNS-dependent expression A/B BED33_19540 IPR011541 Nickel/cobalt transporter, high-affinity BED33_19540 IPR004688 Transition metal uptake transporter nickel/cobalt BED33_19545 IPR029020 Ammonium/urea transporter BED33_19545 IPR004937 Urea transporter BED33_19550 IPR002669 Urease accessory protein UreD BED33_19555 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_19555 IPR003495 CobW/HypB/UreG, nucleotide-binding domain BED33_19555 IPR004400 Urease accessory protein UreG BED33_19560 IPR002639 Urease accessory protein UreF BED33_19560 IPR038277 UreF domain superfamily BED33_19565 IPR012406 Urease accessory protein UreE BED33_19565 IPR007864 Urease accessory protein UreE, C-terminal domain BED33_19565 IPR004029 UreE urease accessory, N-terminal BED33_19565 IPR036118 UreE urease accessory, N-terminal domain superfamily BED33_19570 IPR032466 Metal-dependent hydrolase BED33_19570 IPR029754 Urease nickel binding site BED33_19570 IPR017951 Urease alpha subunit, C-terminal BED33_19570 IPR011059 Metal-dependent hydrolase, composite domain superfamily BED33_19570 IPR017950 Urease active site BED33_19570 IPR011612 Urease alpha-subunit, N-terminal domain BED33_19570 IPR006680 Amidohydrolase-related BED33_19570 IPR005848 Urease, alpha subunit BED33_19575 IPR036461 Urease, beta subunit superfamily BED33_19575 IPR002019 Urease, beta subunit BED33_19580 IPR012010 Urease, gamma subunit BED33_19580 IPR002026 Urease, gamma/gamma-beta subunit BED33_19580 IPR036463 Urease, gamma subunit superfamily BED33_19585 IPR003593 AAA+ ATPase domain BED33_19585 IPR003439 ABC transporter-like BED33_19585 IPR017871 ABC transporter, conserved site BED33_19585 IPR015858 ABC transporter, nickel import, NikE BED33_19585 IPR014137 Nickel import ATP-binding protein NikE BED33_19585 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_19590 IPR003439 ABC transporter-like BED33_19590 IPR017871 ABC transporter, conserved site BED33_19590 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_19590 IPR003593 AAA+ ATPase domain BED33_19590 IPR015857 ABC transporter, nickel import, NikD BED33_19590 IPR014138 Nickel import ATP-binding protein NikD BED33_19595 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED33_19595 IPR035906 MetI-like superfamily BED33_19595 IPR025966 Oligopeptide transport permease C-like, N-terminal domain BED33_19600 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED33_19600 IPR035906 MetI-like superfamily BED33_19605 IPR030678 Peptide/nickel binding protein, MppA-type BED33_19605 IPR023765 Solute-binding protein family 5, conserved site BED33_19605 IPR000914 Solute-binding protein family 5 domain BED33_19605 IPR039424 Solute-binding protein family 5 BED33_19635 IPR012156 Cold shock, CspA BED33_19635 IPR011129 Cold shock domain BED33_19635 IPR019844 Cold-shock (CSD) domain BED33_19635 IPR002059 Cold-shock protein, DNA-binding BED33_19635 IPR012340 Nucleic acid-binding, OB-fold BED33_19650 IPR018994 Protein of unknown function DUF2002 BED33_19655 IPR011701 Major facilitator superfamily BED33_19655 IPR020846 Major facilitator superfamily domain BED33_19655 IPR036259 MFS transporter superfamily BED33_19655 IPR023008 Uncharacterized MFS-type transporter YhhS-like BED33_19660 IPR009057 Homeobox-like domain superfamily BED33_19660 IPR018060 DNA binding HTH domain, AraC-type BED33_19660 IPR018062 HTH domain AraC-type, conserved site BED33_19670 IPR023497 Acid shock protein BED33_19670 IPR009435 Acid shock BED33_19675 IPR010279 Inner membrane protein YqjD/ElaB BED33_19685 IPR003779 Carboxymuconolactone decarboxylase-like BED33_19685 IPR004675 Alkylhydroperoxidase AhpD core BED33_19685 IPR029032 AhpD-like BED33_19695 IPR029039 Flavoprotein-like superfamily BED33_19695 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial BED33_19695 IPR004465 Ribonucleotide reductase Class Ib, NrdI BED33_19700 IPR013346 Ribonucleotide reductase, class I , alpha subunit BED33_19700 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE BED33_19700 IPR000788 Ribonucleotide reductase large subunit, C-terminal BED33_19700 IPR013554 Ribonucleotide reductase N-terminal BED33_19700 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal BED33_19700 IPR039718 Ribonucleoside-diphosphate reductase large subunit BED33_19700 IPR013509 Ribonucleotide reductase large subunit, N-terminal BED33_19705 IPR009078 Ferritin-like superfamily BED33_19705 IPR012348 Ribonucleotide reductase-like BED33_19705 IPR026494 Ribonucleoside reductase subunit beta, NrdF BED33_19705 IPR033909 Ribonucleotide reductase small subunit BED33_19705 IPR000358 Ribonucleotide reductase small subunit family BED33_19705 IPR030475 Ribonucleotide reductase small subunit, acitve site BED33_19710 IPR000644 CBS domain BED33_19710 IPR003593 AAA+ ATPase domain BED33_19710 IPR003439 ABC transporter-like BED33_19710 IPR017871 ABC transporter, conserved site BED33_19710 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_19710 IPR005892 Glycine betaine transport ATP-binding subunit BED33_19715 IPR035906 MetI-like superfamily BED33_19715 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED33_19720 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain BED33_19730 IPR013520 Exonuclease, RNase T/DNA polymerase III BED33_19730 IPR012337 Ribonuclease H-like superfamily BED33_19730 IPR006309 DNA polymerase 3, epsilon subunit BED33_19730 IPR036397 Ribonuclease H superfamily BED33_19730 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain BED33_19735 IPR022892 Ribonuclease HI BED33_19735 IPR002156 Ribonuclease H domain BED33_19735 IPR036397 Ribonuclease H superfamily BED33_19735 IPR012337 Ribonuclease H-like superfamily BED33_19740 IPR026669 Arsenite methyltransferase-like BED33_19740 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED33_19740 IPR013216 Methyltransferase type 11 BED33_19745 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BED33_19745 IPR001279 Metallo-beta-lactamase BED33_19745 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain BED33_19745 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain BED33_19745 IPR017782 Hydroxyacylglutathione hydrolase BED33_19750 IPR000189 Prokaryotic transglycosylase, active site BED33_19750 IPR008258 Transglycosylase SLT domain 1 BED33_19750 IPR036779 LysM domain superfamily BED33_19750 IPR023346 Lysozyme-like domain superfamily BED33_19750 IPR018392 LysM domain BED33_19755 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED33_19755 IPR003346 Transposase, IS116/IS110/IS902 BED33_19760 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BED33_19760 IPR005135 Endonuclease/exonuclease/phosphatase BED33_19760 IPR022958 Uncharacterised protein family UPF0294 BED33_19765 IPR020846 Major facilitator superfamily domain BED33_19765 IPR036259 MFS transporter superfamily BED33_19765 IPR011701 Major facilitator superfamily BED33_19770 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_19770 IPR036390 Winged helix DNA-binding domain superfamily BED33_19770 IPR000847 Transcription regulator HTH, LysR BED33_19770 IPR005119 LysR, substrate-binding BED33_19775 IPR023210 NADP-dependent oxidoreductase domain BED33_19775 IPR020471 Aldo/keto reductase BED33_19775 IPR036812 NADP-dependent oxidoreductase domain superfamily BED33_19775 IPR018170 Aldo/keto reductase, conserved site BED33_19785 IPR001207 Transposase, mutator type BED33_19825 IPR003593 AAA+ ATPase domain BED33_19825 IPR026253 Methionine import ATP-binding protein MetN BED33_19825 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria BED33_19825 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_19825 IPR017871 ABC transporter, conserved site BED33_19825 IPR003439 ABC transporter-like BED33_19825 IPR018449 NIL domain BED33_19825 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain BED33_19825 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal BED33_19830 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED33_19830 IPR035906 MetI-like superfamily BED33_19835 IPR004872 Lipoprotein NlpA family BED33_19840 IPR030852 Outer membrane lipoprotein RcsF BED33_19845 IPR041369 TrmO, C-terminal BED33_19845 IPR036414 YaeB, N-terminal domain superfamily BED33_19845 IPR023368 Uncharacterised protein family UPF0066, conserved site BED33_19845 IPR036413 YaeB-like superfamily BED33_19845 IPR023370 TrmO-like, N-terminal domain BED33_19845 IPR040372 YaeB-like BED33_19850 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 BED33_19850 IPR033730 Prokaryote proline-tRNA ligase core domain BED33_19850 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain BED33_19850 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily BED33_19850 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) BED33_19850 IPR004154 Anticodon-binding BED33_19850 IPR006195 Aminoacyl-tRNA synthetase, class II BED33_19850 IPR036621 Anticodon-binding domain superfamily BED33_19850 IPR002316 Proline-tRNA ligase, class IIa BED33_19850 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type BED33_19855 IPR033450 NlpE, C-terminal OB domain BED33_19855 IPR007298 Copper resistance lipoprotein NlpE BED33_19855 IPR038139 NlpE, C-terminal domain superfamily BED33_19860 IPR000352 Peptide chain release factor class I BED33_19865 IPR038590 YaeQ superfamily BED33_19865 IPR009822 YaeQ BED33_19865 IPR011335 Restriction endonuclease type II-like BED33_19875 IPR009778 Modulator of Rho-dependent transcription termination BED33_19875 IPR038626 Rof-like superfamily BED33_19875 IPR023534 Rof/RNase P-like BED33_19880 IPR036909 Cytochrome c-like domain superfamily BED33_19880 IPR009056 Cytochrome c-like domain BED33_19885 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED33_19885 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal BED33_19885 IPR012094 tRNA(Ile)-lysidine synthase BED33_19885 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal BED33_19885 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain BED33_19885 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal BED33_19890 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BED33_19890 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BED33_19890 IPR037523 Vicinal oxygen chelate (VOC) domain BED33_19890 IPR037478 YwkD-like domain BED33_19900 IPR001095 Acetyl-CoA carboxylase, alpha subunit BED33_19900 IPR029045 ClpP/crotonase-like domain superfamily BED33_19900 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal BED33_19905 IPR016195 Polymerase/histidinol phosphatase-like BED33_19905 IPR003141 Polymerase/histidinol phosphatase, N-terminal BED33_19905 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain BED33_19905 IPR004013 PHP domain BED33_19905 IPR040982 DNA polymerase III alpha subunit finger domain BED33_19905 IPR029460 DNA polymerase, helix-hairpin-helix motif BED33_19905 IPR004805 DNA polymerase III, alpha subunit BED33_19905 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain BED33_19905 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type BED33_19910 IPR022898 Ribonuclease HII BED33_19910 IPR001352 Ribonuclease HII/HIII BED33_19910 IPR024567 Ribonuclease HII/HIII domain BED33_19910 IPR012337 Ribonuclease H-like superfamily BED33_19910 IPR036397 Ribonuclease H superfamily BED33_19915 IPR003835 Glycosyl transferase, family 19 BED33_19925 IPR029069 HotDog domain superfamily BED33_19925 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ BED33_19925 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ BED33_19930 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region BED33_19930 IPR011004 Trimeric LpxA-like superfamily BED33_19930 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD BED33_19930 IPR001451 Hexapeptide repeat BED33_19930 IPR018357 Hexapeptide transferase, conserved site BED33_19935 IPR005632 Chaperone protein Skp BED33_19935 IPR024930 Skp domain superfamily BED33_19940 IPR023707 Outer membrane protein assembly factor BamA BED33_19940 IPR039910 Surface antigen D15-like BED33_19940 IPR010827 POTRA domain, BamA/TamA-like BED33_19940 IPR000184 Bacterial surface antigen (D15) BED33_19940 IPR034746 POTRA domain BED33_19945 IPR008915 Peptidase M50 BED33_19945 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase BED33_19945 IPR036034 PDZ superfamily BED33_19945 IPR001478 PDZ domain BED33_19945 IPR041489 PDZ domain 6 BED33_19950 IPR000374 Phosphatidate cytidylyltransferase BED33_19955 IPR036424 Decaprenyl diphosphate synthase-like superfamily BED33_19955 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site BED33_19955 IPR001441 Decaprenyl diphosphate synthase-like BED33_19960 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase BED33_19960 IPR036169 DXP reductoisomerase, C-terminal domain superfamily BED33_19960 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal BED33_19960 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal BED33_19960 IPR026877 DXP reductoisomerase C-terminal domain BED33_19960 IPR036291 NAD(P)-binding domain superfamily BED33_19965 IPR002661 Ribosome recycling factor BED33_19965 IPR023584 Ribosome recycling factor domain BED33_19965 IPR036191 RRF superfamily BED33_19970 IPR015963 Uridylate kinase, bacteria BED33_19970 IPR036393 Acetylglutamate kinase-like superfamily BED33_19970 IPR001048 Aspartate/glutamate/uridylate kinase BED33_19970 IPR011817 Uridylate kinase BED33_19975 IPR036402 Elongation factor Ts, dimerisation domain superfamily BED33_19975 IPR001816 Translation elongation factor EFTs/EF1B BED33_19975 IPR009060 UBA-like superfamily BED33_19975 IPR018101 Translation elongation factor Ts, conserved site BED33_19975 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation BED33_19980 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily BED33_19980 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid BED33_19980 IPR018130 Ribosomal protein S2, conserved site BED33_19980 IPR001865 Ribosomal protein S2 BED33_19990 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase BED33_19990 IPR006674 HD domain BED33_19990 IPR003607 HD/PDEase domain BED33_19990 IPR002912 ACT domain BED33_19990 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme BED33_19990 IPR002934 Polymerase, nucleotidyl transferase domain BED33_19995 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 BED33_19995 IPR011004 Trimeric LpxA-like superfamily BED33_19995 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family BED33_19995 IPR001451 Hexapeptide repeat BED33_19995 IPR018357 Hexapeptide transferase, conserved site BED33_19995 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily BED33_20000 IPR020911 Uncharacterised protein family UPF0325 BED33_20005 IPR008254 Flavodoxin/nitric oxide synthase BED33_20005 IPR001094 Flavodoxin-like BED33_20005 IPR029039 Flavoprotein-like superfamily BED33_20010 IPR006145 Pseudouridine synthase, RsuA/RluA BED33_20010 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site BED33_20010 IPR020103 Pseudouridine synthase, catalytic domain superfamily BED33_20015 IPR007384 Protein of unknown function UCP006257 BED33_20015 IPR023376 YqcC-like domain BED33_20015 IPR036814 YqcC-like superfamily BED33_20020 IPR009948 Syd BED33_20020 IPR038228 Syd superfamily BED33_20025 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF BED33_20025 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 BED33_20025 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal BED33_20030 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily BED33_20030 IPR031100 LOG family BED33_20030 IPR021826 Domain of unknown function DUF3412 BED33_20030 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal BED33_20035 IPR036279 5'-3' exonuclease, C-terminal domain superfamily BED33_20035 IPR002421 5'-3' exonuclease, N-terminal BED33_20035 IPR022895 Flap endonuclease Xni BED33_20035 IPR029060 PIN-like domain superfamily BED33_20035 IPR008918 Helix-hairpin-helix motif, class 2 BED33_20035 IPR038969 Flap endonuclease BED33_20035 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal BED33_20035 IPR020045 DNA polymerase I-like, H3TH domain BED33_20040 IPR003346 Transposase, IS116/IS110/IS902 BED33_20040 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED33_20045 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED33_20045 IPR040739 RlmM ferredoxin-like domain BED33_20045 IPR011224 Ribosomal RNA large subunit methyltransferase M BED33_20045 IPR002877 Ribosomal RNA methyltransferase FtsJ domain BED33_20050 IPR006696 Protein of unknown function DUF423 BED33_20055 IPR036390 Winged helix DNA-binding domain superfamily BED33_20055 IPR005119 LysR, substrate-binding BED33_20055 IPR000847 Transcription regulator HTH, LysR BED33_20055 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_20060 IPR010920 LSM domain superfamily BED33_20060 IPR010305 Protein of unknown function DUF903 BED33_20065 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED33_20065 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED33_20065 IPR015424 Pyridoxal phosphate-dependent transferase BED33_20065 IPR000192 Aminotransferase class V domain BED33_20065 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site BED33_20065 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA BED33_20070 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE BED33_20070 IPR003808 Fe-S metabolism associated domain, SufE-like BED33_20075 IPR000594 THIF-type NAD/FAD binding fold BED33_20075 IPR035985 Ubiquitin-activating enzyme BED33_20080 IPR036908 RlpA-like domain superfamily BED33_20080 IPR010611 3D domain BED33_20080 IPR026044 Membrane-bound lytic murein transglycosylase A BED33_20080 IPR034654 MltA, 3D domain BED33_20080 IPR005300 Lytic transglycosylase MltA, domain B BED33_20100 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain BED33_20100 IPR006311 Twin-arginine translocation pathway, signal sequence BED33_20100 IPR021731 AMIN domain BED33_20105 IPR000182 GNAT domain BED33_20105 IPR016181 Acyl-CoA N-acyltransferase BED33_20105 IPR036393 Acetylglutamate kinase-like superfamily BED33_20105 IPR001048 Aspartate/glutamate/uridylate kinase BED33_20105 IPR033719 N-acetylglutamate synthase, kinase-like domain BED33_20105 IPR010167 Amino-acid N-acetyltransferase BED33_20110 IPR027785 UvrD-like helicase C-terminal domain BED33_20110 IPR041851 RecBCD enzyme subunit RecD, N-terminal domain BED33_20110 IPR006344 RecBCD enzyme subunit RecD BED33_20110 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_20110 IPR003593 AAA+ ATPase domain BED33_20115 IPR004586 RecBCD enzyme subunit RecB BED33_20115 IPR011335 Restriction endonuclease type II-like BED33_20115 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type BED33_20115 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_20115 IPR014017 UvrD-like DNA helicase, C-terminal BED33_20115 IPR034739 UvrD/AddA helicase, N-terminal BED33_20115 IPR011604 Exonuclease, phage-type/RecB, C-terminal BED33_20115 IPR014016 UvrD-like helicase, ATP-binding domain BED33_20115 IPR000212 DNA helicase, UvrD/REP type BED33_20120 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like BED33_20120 IPR011765 Peptidase M16, N-terminal BED33_20120 IPR001431 Peptidase M16, zinc-binding site BED33_20120 IPR007863 Peptidase M16, C-terminal BED33_20120 IPR032632 Peptidase M16, middle/third domain BED33_20125 IPR011335 Restriction endonuclease type II-like BED33_20125 IPR041500 RecC, C-terminal BED33_20125 IPR006697 RecBCD enzyme subunit RecC BED33_20125 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_20125 IPR013986 DExx box DNA helicase domain superfamily BED33_20130 IPR022204 Prepilin peptidase dependent protein C BED33_20130 IPR012902 Prokaryotic N-terminal methylation site BED33_20150 IPR000398 Thymidylate synthase BED33_20150 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily BED33_20150 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain BED33_20150 IPR020940 Thymidylate synthase, active site BED33_20155 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt BED33_20160 IPR003018 GAF domain BED33_20160 IPR040442 Pyruvate kinase-like domain superfamily BED33_20160 IPR008279 PEP-utilising enzyme, mobile domain BED33_20160 IPR018274 PEP-utilising enzyme, active site BED33_20160 IPR023151 PEP-utilising enzyme, conserved site BED33_20160 IPR036637 Phosphohistidine domain superfamily BED33_20160 IPR006318 Phosphotransferase system, enzyme I-like BED33_20160 IPR008731 Phosphotransferase system, enzyme I N-terminal BED33_20160 IPR036618 PtsI, HPr-binding domain superfamily BED33_20160 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily BED33_20160 IPR029016 GAF-like domain superfamily BED33_20160 IPR000121 PEP-utilising enzyme, C-terminal BED33_20175 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II BED33_20175 IPR004230 DNA mismatch repair protein MutH BED33_20175 IPR011335 Restriction endonuclease type II-like BED33_20175 IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II superfamily BED33_20180 IPR005496 Integral membrane protein TerC BED33_20185 IPR020471 Aldo/keto reductase BED33_20185 IPR036812 NADP-dependent oxidoreductase domain superfamily BED33_20185 IPR023210 NADP-dependent oxidoreductase domain BED33_20195 IPR023775 Bifunctional protein Aas BED33_20195 IPR025110 AMP-binding enzyme, C-terminal domain BED33_20195 IPR020845 AMP-binding, conserved site BED33_20195 IPR000873 AMP-dependent synthetase/ligase BED33_20195 IPR042099 AMP-dependent synthetase-like superfamily BED33_20195 IPR002123 Phospholipid/glycerol acyltransferase BED33_20200 IPR006656 Molybdopterin oxidoreductase BED33_20200 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site BED33_20200 IPR009010 Aspartate decarboxylase-like domain superfamily BED33_20200 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase BED33_20200 IPR006657 Molybdopterin dinucleotide-binding domain BED33_20205 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BED33_20205 IPR028082 Periplasmic binding protein-like I BED33_20205 IPR000843 LacI-type HTH domain BED33_20210 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal BED33_20210 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal BED33_20210 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site BED33_20210 IPR000183 Ornithine/DAP/Arg decarboxylase BED33_20210 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site BED33_20210 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal BED33_20210 IPR029066 PLP-binding barrel BED33_20210 IPR002986 Diaminopimelate decarboxylase, LysA BED33_20215 IPR036390 Winged helix DNA-binding domain superfamily BED33_20215 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_20215 IPR000847 Transcription regulator HTH, LysR BED33_20215 IPR037414 Transcriptional activator protein LysR, PBP2 domain BED33_20215 IPR005119 LysR, substrate-binding BED33_20220 IPR011701 Major facilitator superfamily BED33_20220 IPR020846 Major facilitator superfamily domain BED33_20220 IPR036259 MFS transporter superfamily BED33_20290 IPR000983 Bacterial general secretion pathway protein G-type pilin BED33_20290 IPR012902 Prokaryotic N-terminal methylation site BED33_20290 IPR013545 Type II secretion system protein G BED33_20290 IPR010054 General secretion pathway protein G BED33_20305 IPR001775 GspD/PilQ family BED33_20305 IPR005644 NolW-like BED33_20305 IPR038591 NolW-like superfamily BED33_20305 IPR004846 Type II/III secretion system BED33_20305 IPR004845 Type II secretion system GspD, conserved site BED33_20305 IPR013356 Type II secretion system GspD BED33_20320 IPR001765 Carbonic anhydrase BED33_20320 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site BED33_20320 IPR036874 Carbonic anhydrase superfamily BED33_20325 IPR002577 Helix-turn-helix, HxlR type BED33_20325 IPR011991 ArsR-like helix-turn-helix domain BED33_20325 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_20325 IPR036390 Winged helix DNA-binding domain superfamily BED33_20330 IPR036291 NAD(P)-binding domain superfamily BED33_20330 IPR002347 Short-chain dehydrogenase/reductase SDR BED33_20335 IPR022835 Chaperone modulatory protein CbpM BED33_20340 IPR023859 DNA-binding protein, curved-DNA BED33_20340 IPR002939 Chaperone DnaJ, C-terminal BED33_20340 IPR036869 Chaperone J-domain superfamily BED33_20340 IPR008971 HSP40/DnaJ peptide-binding BED33_20340 IPR001623 DnaJ domain BED33_20340 IPR018253 DnaJ domain, conserved site BED33_20345 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED33_20345 IPR003346 Transposase, IS116/IS110/IS902 BED33_20350 IPR013656 PAS fold-4 BED33_20350 IPR000700 PAS-associated, C-terminal BED33_20350 IPR000014 PAS domain BED33_20350 IPR035965 PAS domain superfamily BED33_20350 IPR029787 Nucleotide cyclase BED33_20350 IPR000160 GGDEF domain BED33_20355 IPR037401 SnoaL-like domain BED33_20355 IPR032710 NTF2-like domain superfamily BED33_20370 IPR001207 Transposase, mutator type BED33_20375 IPR032758 Antitoxin MqsA/HigA-2 BED33_20375 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BED33_20375 IPR001387 Cro/C1-type helix-turn-helix domain BED33_20375 IPR022453 Zinc finger, MqsA-type BED33_20375 IPR022452 Antitoxin MqsA BED33_20380 IPR031451 mRNA interferase toxin MqsR BED33_20380 IPR038493 Toxin MqsR superfamily BED33_20395 IPR009057 Homeobox-like domain superfamily BED33_20395 IPR025959 Winged helix-turn helix domain BED33_20395 IPR012337 Ribonuclease H-like superfamily BED33_20395 IPR038717 Tc1-like transposase, DDE domain BED33_20400 IPR002104 Integrase, catalytic domain BED33_20400 IPR013762 Integrase-like, catalytic domain superfamily BED33_20400 IPR011010 DNA breaking-rejoining enzyme, catalytic core BED33_20400 IPR010998 Integrase/recombinase, N-terminal BED33_20440 IPR038717 Tc1-like transposase, DDE domain BED33_20440 IPR009057 Homeobox-like domain superfamily BED33_20440 IPR012337 Ribonuclease H-like superfamily BED33_20440 IPR025959 Winged helix-turn helix domain BED33_20475 IPR011010 DNA breaking-rejoining enzyme, catalytic core BED33_20475 IPR002104 Integrase, catalytic domain BED33_20475 IPR013762 Integrase-like, catalytic domain superfamily BED33_20485 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal BED33_20485 IPR012340 Nucleic acid-binding, OB-fold BED33_20485 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II BED33_20485 IPR002313 Lysine-tRNA ligase, class II BED33_20485 IPR006195 Aminoacyl-tRNA synthetase, class II BED33_20485 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) BED33_20485 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type BED33_20490 IPR000352 Peptide chain release factor class I BED33_20490 IPR004374 Peptide chain release factor 2 BED33_20490 IPR005139 Peptide chain release factor BED33_20495 IPR038763 DHH phosphoesterase superfamily BED33_20495 IPR001667 DDH domain BED33_20495 IPR041122 RecJ, OB domain BED33_20495 IPR003156 DHHA1 domain BED33_20495 IPR004610 Bacterial RecJ exonuclease BED33_20500 IPR033954 Disulphide bond isomerase, DsbC/G BED33_20500 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily BED33_20500 IPR012336 Thioredoxin-like fold BED33_20500 IPR017937 Thioredoxin, conserved site BED33_20500 IPR036249 Thioredoxin-like superfamily BED33_20500 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal BED33_20500 IPR013766 Thioredoxin domain BED33_20505 IPR023009 Tyrosine recombinase XerC/XerD BED33_20505 IPR013762 Integrase-like, catalytic domain superfamily BED33_20505 IPR011932 Tyrosine recombinase XerD BED33_20505 IPR004107 Integrase, SAM-like, N-terminal BED33_20505 IPR010998 Integrase/recombinase, N-terminal BED33_20505 IPR011010 DNA breaking-rejoining enzyme, catalytic core BED33_20505 IPR002104 Integrase, catalytic domain BED33_20510 IPR010086 Flavodoxin, long chain BED33_20510 IPR001226 Flavodoxin, conserved site BED33_20510 IPR008254 Flavodoxin/nitric oxide synthase BED33_20510 IPR029039 Flavoprotein-like superfamily BED33_20515 IPR010364 Uncharacterised protein family, inner membrane CreD BED33_20520 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BED33_20520 IPR029151 Periplasmic sensor-like domain superfamily BED33_20520 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BED33_20520 IPR005467 Histidine kinase domain BED33_20520 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BED33_20520 IPR003594 Histidine kinase/HSP90-like ATPase BED33_20520 IPR003660 HAMP domain BED33_20520 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BED33_20525 IPR016032 Signal transduction response regulator, C-terminal effector BED33_20525 IPR001789 Signal transduction response regulator, receiver domain BED33_20525 IPR001867 OmpR/PhoB-type DNA-binding domain BED33_20525 IPR011006 CheY-like superfamily BED33_20525 IPR039420 Transcriptional regulatory protein WalR-like BED33_20525 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_20530 IPR009883 Inner membrane protein YgfX BED33_20535 IPR036714 Flavinator of succinate dehydrogenase superfamily BED33_20535 IPR005631 Flavinator of succinate dehydrogenase BED33_20540 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal BED33_20540 IPR017703 YgfZ/GcvT conserved site BED33_20540 IPR023758 tRNA-modifying protein YgfZ BED33_20540 IPR006222 Aminomethyltransferase, folate-binding domain BED33_20545 IPR003346 Transposase, IS116/IS110/IS902 BED33_20545 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED33_20550 IPR004254 AdipoR/Haemolysin-III-related BED33_20550 IPR005744 Hly-III BED33_20560 IPR036291 NAD(P)-binding domain superfamily BED33_20560 IPR020904 Short-chain dehydrogenase/reductase, conserved site BED33_20560 IPR002347 Short-chain dehydrogenase/reductase SDR BED33_20570 IPR015424 Pyridoxal phosphate-dependent transferase BED33_20570 IPR003437 Glycine dehydrogenase (decarboxylating) BED33_20570 IPR020581 Glycine cleavage system P protein BED33_20570 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED33_20570 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED33_20575 IPR017453 Glycine cleavage system H-protein, subgroup BED33_20575 IPR033753 Glycine cleavage system H-protein/Simiate BED33_20575 IPR000089 Biotin/lipoyl attachment BED33_20575 IPR011053 Single hybrid motif BED33_20575 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site BED33_20575 IPR002930 Glycine cleavage system H-protein BED33_20580 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 BED33_20580 IPR006223 Glycine cleavage system T protein BED33_20580 IPR022903 Glycine cleavage system T protein, bacteria BED33_20580 IPR028896 Aminomethyltransferase-like BED33_20580 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal BED33_20580 IPR006222 Aminomethyltransferase, folate-binding domain BED33_20580 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain BED33_20585 IPR002938 FAD-binding domain BED33_20585 IPR036188 FAD/NAD(P)-binding domain superfamily BED33_20585 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site BED33_20585 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 BED33_20590 IPR036188 FAD/NAD(P)-binding domain superfamily BED33_20590 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 BED33_20590 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase BED33_20590 IPR002938 FAD-binding domain BED33_20590 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site BED33_20595 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal BED33_20595 IPR001714 Peptidase M24, methionine aminopeptidase BED33_20595 IPR007865 Aminopeptidase P, N-terminal BED33_20595 IPR036005 Creatinase/aminopeptidase-like BED33_20595 IPR000994 Peptidase M24 BED33_20595 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site BED33_20600 IPR036255 YgfB-like superfamily BED33_20600 IPR011978 Uncharacterised protein family UPF0149 BED33_20605 IPR007838 Cell division protein ZapA-like BED33_20605 IPR036192 Cell division protein ZapA-like superfamily BED33_20605 IPR023771 Cell division protein ZapA, eubacteria BED33_20615 IPR002698 5-formyltetrahydrofolate cyclo-ligase BED33_20615 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily BED33_20615 IPR037171 NagB/RpiA transferase-like BED33_20620 IPR000941 Enolase BED33_20620 IPR036849 Enolase-like, C-terminal domain superfamily BED33_20620 IPR029017 Enolase-like, N-terminal BED33_20620 IPR020810 Enolase, C-terminal TIM barrel domain BED33_20620 IPR020809 Enolase, conserved site BED33_20620 IPR020811 Enolase, N-terminal BED33_20625 IPR029062 Class I glutamine amidotransferase-like BED33_20625 IPR033828 CTP synthase GATase domain BED33_20625 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_20625 IPR017926 Glutamine amidotransferase BED33_20625 IPR017456 CTP synthase, N-terminal BED33_20625 IPR004468 CTP synthase BED33_20630 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core BED33_20630 IPR011551 NTP pyrophosphohydrolase MazG BED33_20635 IPR033655 RelA, TGS domain BED33_20635 IPR004095 TGS BED33_20635 IPR007685 RelA/SpoT BED33_20635 IPR002912 ACT domain BED33_20635 IPR004811 RelA/SpoT family BED33_20635 IPR003607 HD/PDEase domain BED33_20635 IPR012675 Beta-grasp domain superfamily BED33_20635 IPR012676 TGS-like BED33_20640 IPR030391 RNA methyltransferase TrmA, conserved site BED33_20640 IPR012340 Nucleic acid-binding, OB-fold BED33_20640 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED33_20640 IPR030390 RNA methyltransferase TrmA, active site BED33_20640 IPR002792 TRAM domain BED33_20640 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD BED33_20640 IPR010280 (Uracil-5)-methyltransferase family BED33_20645 IPR001789 Signal transduction response regulator, receiver domain BED33_20645 IPR019247 Histidine kinase BarA, N-terminal BED33_20645 IPR011006 CheY-like superfamily BED33_20645 IPR036641 HPT domain superfamily BED33_20645 IPR003660 HAMP domain BED33_20645 IPR003594 Histidine kinase/HSP90-like ATPase BED33_20645 IPR005467 Histidine kinase domain BED33_20645 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BED33_20645 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BED33_20645 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain BED33_20645 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BED33_20645 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BED33_20650 IPR009003 Peptidase S1, PA clan BED33_20650 IPR036034 PDZ superfamily BED33_20650 IPR011782 Peptidase S1C, Do BED33_20650 IPR001940 Peptidase S1C BED33_20650 IPR001478 PDZ domain BED33_20655 IPR026875 Phosphohydrolase-associated domain BED33_20655 IPR006674 HD domain BED33_20655 IPR003607 HD/PDEase domain BED33_20655 IPR020779 dNTP triphosphohydrolase, type 1 BED33_20655 IPR006261 dNTP triphosphohydrolase BED33_20655 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain superfamily BED33_20660 IPR010049 MTA/SAH nucleosidase BED33_20660 IPR000845 Nucleoside phosphorylase domain BED33_20660 IPR035994 Nucleoside phosphorylase superfamily BED33_20665 IPR002491 ABC transporter periplasmic binding domain BED33_20665 IPR023544 ABC transporter, vitamin B12-binding protein BED33_20670 IPR005115 Uncharacterised domain UPF0126 BED33_20675 IPR016092 FeS cluster insertion protein BED33_20675 IPR000361 FeS cluster biogenesis BED33_20675 IPR023063 FeS cluster insertion protein ErpA BED33_20675 IPR035903 HesB-like domain superfamily BED33_20675 IPR017870 FeS cluster insertion, C-terminal, conserved site BED33_20680 IPR001807 Chloride channel, voltage gated BED33_20680 IPR014743 Chloride channel, core BED33_20680 IPR023861 Chloride channel, ClcA BED33_20685 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED33_20685 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED33_20685 IPR015424 Pyridoxal phosphate-dependent transferase BED33_20685 IPR005814 Aminotransferase class-III BED33_20685 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase BED33_20690 IPR011701 Major facilitator superfamily BED33_20690 IPR036259 MFS transporter superfamily BED33_20690 IPR004737 Nitrate transporter BED33_20695 IPR037294 ABC transporter, BtuC-like BED33_20695 IPR000522 ABC transporter, permease protein, BtuC-like BED33_20700 IPR002491 ABC transporter periplasmic binding domain BED33_20705 IPR003593 AAA+ ATPase domain BED33_20705 IPR017871 ABC transporter, conserved site BED33_20705 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_20705 IPR003439 ABC transporter-like BED33_20710 IPR036950 Penicillin binding protein transglycosylase domain BED33_20710 IPR011813 Penicillin-binding protein 1B BED33_20710 IPR032730 Transglycosylase PBP1b, N-terminal transmembrane domain BED33_20710 IPR023346 Lysozyme-like domain superfamily BED33_20710 IPR001264 Glycosyl transferase, family 51 BED33_20710 IPR028166 Bifunctional transglycosylase second domain BED33_20710 IPR001460 Penicillin-binding protein, transpeptidase BED33_20710 IPR012338 Beta-lactamase/transpeptidase-like BED33_20715 IPR007502 Helicase-associated domain BED33_20715 IPR014001 Helicase superfamily 1/2, ATP-binding domain BED33_20715 IPR011545 DEAD/DEAH box helicase domain BED33_20715 IPR010225 ATP-dependent helicase HrpB BED33_20715 IPR001650 Helicase, C-terminal BED33_20715 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal BED33_20715 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_20720 IPR014051 Phosphoesterase, HXTX BED33_20720 IPR009097 Cyclic phosphodiesterase BED33_20720 IPR004175 RNA 2',3'-cyclic phosphodiesterase BED33_20725 IPR005224 Sugar fermentation stimulation protein BED33_20725 IPR040452 Sugar fermentation stimulation protein, C-terminal BED33_20725 IPR041465 SfsA, N-terminal OB domain BED33_20730 IPR020458 Zinc finger, DksA/TraR C4-type conserved site BED33_20730 IPR000962 Zinc finger, DksA/TraR C4-type BED33_20730 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria BED33_20730 IPR012784 RNA polymerase-binding transcription factor DksA BED33_20730 IPR037187 DksA, N-terminal domain superfamily BED33_20735 IPR022380 Glutamyl-Q tRNA(Asp) synthetase BED33_20735 IPR000924 Glutamyl/glutaminyl-tRNA synthetase BED33_20735 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain BED33_20735 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED33_20740 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain BED33_20740 IPR002646 Poly A polymerase, head domain BED33_20740 IPR010206 Poly(A) polymerase I BED33_20740 IPR025866 Polymerase A arginine-rich C-terminal domain BED33_20745 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK BED33_20745 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily BED33_20750 IPR003700 Ketopantoate hydroxymethyltransferase BED33_20750 IPR040442 Pyruvate kinase-like domain superfamily BED33_20750 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily BED33_20755 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain BED33_20755 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED33_20755 IPR003721 Pantoate-beta-alanine ligase BED33_20760 IPR003190 Aspartate decarboxylase BED33_20760 IPR009010 Aspartate decarboxylase-like domain superfamily BED33_20765 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel BED33_20765 IPR002509 NodB homology domain BED33_20770 IPR013525 ABC-2 type transporter BED33_20770 IPR000412 ABC-2 transporter BED33_20775 IPR003593 AAA+ ATPase domain BED33_20775 IPR003439 ABC transporter-like BED33_20775 IPR017871 ABC transporter, conserved site BED33_20775 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_20780 IPR001765 Carbonic anhydrase BED33_20780 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site BED33_20780 IPR036874 Carbonic anhydrase superfamily BED33_20785 IPR000836 Phosphoribosyltransferase domain BED33_20785 IPR005904 Hypoxanthine phosphoribosyl transferase BED33_20785 IPR029057 Phosphoribosyltransferase-like BED33_20790 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal BED33_20790 IPR006311 Twin-arginine translocation pathway, signal sequence BED33_20790 IPR008972 Cupredoxin BED33_20790 IPR011707 Multicopper oxidase, type 3 BED33_20790 IPR002355 Multicopper oxidase, copper-binding site BED33_20790 IPR011706 Multicopper oxidase, type 2 BED33_20790 IPR001117 Multicopper oxidase, type 1 BED33_20795 IPR019114 Chaperone lipoprotein, PulS/OutS-like BED33_20795 IPR038432 PulS/OutS-like superfamily BED33_20800 IPR030373 Polyamine biosynthesis domain, conserved site BED33_20800 IPR001045 Spermidine/spermine synthases BED33_20800 IPR035246 Spermidine synthase, tetramerisation domain BED33_20800 IPR037163 Spermidine synthase, tetramerisation domain superfamily BED33_20800 IPR030374 Polyamine biosynthesis domain BED33_20800 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED33_20805 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic BED33_20805 IPR009165 S-adenosylmethionine decarboxylase, bacterial BED33_20805 IPR016067 S-adenosylmethionine decarboxylase, core BED33_20810 IPR041256 CDI immunity protein BED33_20815 IPR000620 EamA domain BED33_20820 IPR008249 Uncharacterised protein family UPF0231 BED33_20830 IPR010105 TonB-dependent siderophore receptor BED33_20830 IPR010917 TonB-dependent receptor, conserved site BED33_20830 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BED33_20830 IPR000531 TonB-dependent receptor-like, beta-barrel BED33_20830 IPR012910 TonB-dependent receptor, plug domain BED33_20830 IPR039426 Vitamin B12 transporter BtuB-like BED33_20830 IPR037066 TonB-dependent receptor, plug domain superfamily BED33_20835 IPR018062 HTH domain AraC-type, conserved site BED33_20835 IPR018060 DNA binding HTH domain, AraC-type BED33_20835 IPR029062 Class I glutamine amidotransferase-like BED33_20835 IPR020449 Transcription regulator HTH, AraC- type BED33_20835 IPR002818 DJ-1/PfpI BED33_20835 IPR009057 Homeobox-like domain superfamily BED33_20845 IPR036188 FAD/NAD(P)-binding domain superfamily BED33_20845 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site BED33_20845 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BED33_20845 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I BED33_20845 IPR006258 Dihydrolipoamide dehydrogenase BED33_20845 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily BED33_20845 IPR023753 FAD/NAD(P)-binding domain BED33_20850 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site BED33_20850 IPR000089 Biotin/lipoyl attachment BED33_20850 IPR036625 E3-binding domain superfamily BED33_20850 IPR004167 Peripheral subunit-binding domain BED33_20850 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily BED33_20850 IPR011053 Single hybrid motif BED33_20850 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain BED33_20850 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex BED33_20855 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal BED33_20855 IPR004660 Pyruvate dehydrogenase E1 component BED33_20855 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II BED33_20855 IPR041621 Pyruvate dehydrogenase E1 component, middle domain BED33_20855 IPR029061 Thiamin diphosphate-binding fold BED33_20855 IPR005474 Transketolase, N-terminal BED33_20860 IPR011711 GntR, C-terminal BED33_20860 IPR008920 Transcription regulator FadR/GntR, C-terminal BED33_20860 IPR000524 Transcription regulator HTH, GntR BED33_20860 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_20860 IPR036390 Winged helix DNA-binding domain superfamily BED33_20865 IPR004841 Amino acid permease/ SLC12A domain BED33_20865 IPR004840 Amino acid permease, conserved site BED33_20870 IPR031347 Protein AmpE BED33_20875 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily BED33_20875 IPR002502 N-acetylmuramoyl-L-alanine amidase domain BED33_20880 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal BED33_20880 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily BED33_20880 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal BED33_20880 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal BED33_20880 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD BED33_20880 IPR004393 Nicotinate-nucleotide pyrophosphorylase BED33_20880 IPR013785 Aldolase-type TIM barrel BED33_20885 IPR012902 Prokaryotic N-terminal methylation site BED33_20890 IPR001482 Type II/IV secretion system protein BED33_20890 IPR007831 General secretory system II, protein E, N-terminal BED33_20890 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_20895 IPR003004 GspF/PilC family BED33_20895 IPR001992 Type II secretion system conserved site BED33_20895 IPR018076 Type II secretion system F domain BED33_20895 IPR042094 Type II secretion system F domain superfamily BED33_20900 IPR013785 Aldolase-type TIM barrel BED33_20900 IPR005993 GMP reductase BED33_20900 IPR001093 IMP dehydrogenase/GMP reductase BED33_20900 IPR015875 IMP dehydrogenase / GMP reductase, conserved site BED33_20905 IPR001977 Dephospho-CoA kinase BED33_20905 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_20910 IPR009777 Cell division protein ZapD BED33_20910 IPR027462 Z ring-associated protein D, C-terminal BED33_20910 IPR036268 ZapD domain superfamily BED33_20915 IPR005584 DNA gyrase inhibitor YacG BED33_20915 IPR013088 Zinc finger, NHR/GATA-type BED33_20920 IPR020084 NUDIX hydrolase, conserved site BED33_20920 IPR000086 NUDIX hydrolase domain BED33_20920 IPR015797 NUDIX hydrolase-like domain superfamily BED33_20920 IPR020476 NUDIX hydrolase BED33_20920 IPR003561 Mutator MutT BED33_20925 IPR036266 SecA, Wing/Scaffold superfamily BED33_20925 IPR014018 SecA motor DEAD BED33_20925 IPR011116 SecA Wing/Scaffold BED33_20925 IPR011130 SecA, preprotein cross-linking domain BED33_20925 IPR011115 SecA DEAD-like, N-terminal BED33_20925 IPR000185 Protein translocase subunit SecA BED33_20925 IPR036670 SecA, preprotein cross-linking domain superfamily BED33_20925 IPR020937 SecA conserved site BED33_20925 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_20925 IPR004027 SEC-C motif BED33_20930 IPR009502 Secretion monitor BED33_20940 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase BED33_20940 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal BED33_20940 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal BED33_20940 IPR020568 Ribosomal protein S5 domain 2-type fold BED33_20945 IPR020805 Cell division protein FtsZ, conserved site BED33_20945 IPR008280 Tubulin/FtsZ, C-terminal BED33_20945 IPR024757 Cell division protein FtsZ, C-terminal BED33_20945 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain BED33_20945 IPR036525 Tubulin/FtsZ, GTPase domain superfamily BED33_20945 IPR003008 Tubulin/FtsZ, GTPase domain BED33_20945 IPR000158 Cell division protein FtsZ BED33_20950 IPR003494 SHS2 domain inserted in FtsA BED33_20950 IPR020823 Cell division protein FtsA BED33_20955 IPR026579 Cell division protein FtsQ BED33_20955 IPR005548 Cell division protein FtsQ/DivIB BED33_20955 IPR013685 POTRA domain, FtsQ-type BED33_20955 IPR034746 POTRA domain BED33_20960 IPR011761 ATP-grasp fold BED33_20960 IPR013815 ATP-grasp fold, subdomain 1 BED33_20960 IPR005905 D-alanine--D-alanine ligase BED33_20960 IPR011127 D-alanine--D-alanine ligase, N-terminal domain BED33_20960 IPR016185 Pre-ATP-grasp domain superfamily BED33_20960 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site BED33_20960 IPR011095 D-alanine--D-alanine ligase, C-terminal BED33_20965 IPR013221 Mur ligase, central BED33_20965 IPR000713 Mur ligase, N-terminal catalytic domain BED33_20965 IPR036615 Mur ligase, C-terminal domain superfamily BED33_20965 IPR004101 Mur ligase, C-terminal BED33_20965 IPR005758 UDP-N-acetylmuramate--L-alanine ligase BED33_20965 IPR036565 Mur-like, catalytic domain superfamily BED33_20970 IPR007235 Glycosyl transferase, family 28, C-terminal BED33_20970 IPR006009 N-acetylglucosaminyltransferase, MurG BED33_20970 IPR004276 Glycosyltransferase family 28, N-terminal domain BED33_20975 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site BED33_20975 IPR013437 Probable peptidoglycan glycosyltransferase FtsW BED33_20975 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA BED33_20980 IPR036565 Mur-like, catalytic domain superfamily BED33_20980 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase BED33_20980 IPR013221 Mur ligase, central BED33_20980 IPR036615 Mur ligase, C-terminal domain superfamily BED33_20980 IPR004101 Mur ligase, C-terminal BED33_20985 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site BED33_20985 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase BED33_20985 IPR000715 Glycosyl transferase, family 4 BED33_20990 IPR013221 Mur ligase, central BED33_20990 IPR036615 Mur ligase, C-terminal domain superfamily BED33_20990 IPR036565 Mur-like, catalytic domain superfamily BED33_20990 IPR000713 Mur ligase, N-terminal catalytic domain BED33_20990 IPR004101 Mur ligase, C-terminal BED33_20990 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase BED33_20990 IPR035911 MurE/MurF, N-terminal BED33_20995 IPR004101 Mur ligase, C-terminal BED33_20995 IPR013221 Mur ligase, central BED33_20995 IPR000713 Mur ligase, N-terminal catalytic domain BED33_20995 IPR035911 MurE/MurF, N-terminal BED33_20995 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase BED33_20995 IPR036565 Mur-like, catalytic domain superfamily BED33_20995 IPR036615 Mur ligase, C-terminal domain superfamily BED33_21000 IPR001460 Penicillin-binding protein, transpeptidase BED33_21000 IPR036138 Penicillin-binding protein, dimerisation domain superfamily BED33_21000 IPR005311 Penicillin-binding protein, dimerisation domain BED33_21000 IPR012338 Beta-lactamase/transpeptidase-like BED33_21000 IPR037532 Peptidoglycan D,D-transpeptidase FtsI BED33_21010 IPR002903 Ribosomal RNA small subunit methyltransferase H BED33_21010 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily BED33_21010 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED33_21015 IPR037914 SpoVT-AbrB domain superfamily BED33_21015 IPR003444 Transcriptional regulator MraZ BED33_21015 IPR035644 MraZ, C-terminal BED33_21015 IPR020603 MraZ domain BED33_21015 IPR035642 MraZ, N-terminal BED33_21015 IPR038619 MraZ superfamily BED33_21015 IPR007159 SpoVT-AbrB domain BED33_21020 IPR010574 L-alanine exporter AlaE BED33_21025 IPR012781 D-fructose-responsive transcription factor BED33_21025 IPR000843 LacI-type HTH domain BED33_21025 IPR001761 Periplasmic binding protein/LacI sugar binding domain BED33_21025 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BED33_21025 IPR028082 Periplasmic binding protein-like I BED33_21030 IPR004789 Acetolactate synthase, small subunit BED33_21030 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal BED33_21030 IPR019455 Acetolactate synthase, small subunit, C-terminal BED33_21030 IPR002912 ACT domain BED33_21030 IPR039557 AHAS, ACT domain BED33_21035 IPR029035 DHS-like NAD/FAD-binding domain superfamily BED33_21035 IPR029061 Thiamin diphosphate-binding fold BED33_21035 IPR012000 Thiamine pyrophosphate enzyme, central domain BED33_21035 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain BED33_21035 IPR000399 TPP-binding enzyme, conserved site BED33_21035 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding BED33_21035 IPR039368 Acetolactate synthase large subunit, TPP binding domain BED33_21035 IPR012846 Acetolactate synthase, large subunit, biosynthetic BED33_21040 IPR000873 AMP-dependent synthetase/ligase BED33_21040 IPR020845 AMP-binding, conserved site BED33_21040 IPR042099 AMP-dependent synthetase-like superfamily BED33_21045 IPR005119 LysR, substrate-binding BED33_21045 IPR036390 Winged helix DNA-binding domain superfamily BED33_21045 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_21045 IPR000847 Transcription regulator HTH, LysR BED33_21050 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain BED33_21050 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site BED33_21050 IPR013785 Aldolase-type TIM barrel BED33_21050 IPR005671 2-isopropylmalate synthase, bacterial-type BED33_21050 IPR000891 Pyruvate carboxyltransferase BED33_21050 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily BED33_21055 IPR024084 Isopropylmalate dehydrogenase-like domain BED33_21055 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site BED33_21055 IPR004429 Isopropylmalate dehydrogenase BED33_21060 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 BED33_21060 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain BED33_21060 IPR018136 Aconitase family, 4Fe-4S cluster binding site BED33_21060 IPR036008 Aconitase, iron-sulfur domain BED33_21060 IPR033941 3-Isopropylmalate dehydratase, catalytic domain BED33_21060 IPR004430 3-isopropylmalate dehydratase, large subunit BED33_21065 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain BED33_21065 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel BED33_21065 IPR004431 3-isopropylmalate dehydratase, small subunit BED33_21065 IPR033940 3-isopropylmalate dehydratase, swivel domain BED33_21080 IPR004750 Sugar efflux BED33_21080 IPR036259 MFS transporter superfamily BED33_21080 IPR020846 Major facilitator superfamily domain BED33_21080 IPR011701 Major facilitator superfamily BED33_21095 IPR039424 Solute-binding protein family 5 BED33_21095 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain BED33_21095 IPR023767 Transcriptional regulator SgrR BED33_21095 IPR036390 Winged helix DNA-binding domain superfamily BED33_21095 IPR000914 Solute-binding protein family 5 domain BED33_21110 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria BED33_21110 IPR006061 Solute-binding family 1, conserved site BED33_21110 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter BED33_21115 IPR005947 Thiamine ABC transporter, permease protein BED33_21115 IPR035906 MetI-like superfamily BED33_21115 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED33_21120 IPR003439 ABC transporter-like BED33_21120 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_21120 IPR017871 ABC transporter, conserved site BED33_21120 IPR003593 AAA+ ATPase domain BED33_21120 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ BED33_21125 IPR032816 SNARE associated Golgi protein BED33_21125 IPR032818 DedA family BED33_21130 IPR017964 DNA-directed DNA polymerase, family B, conserved site BED33_21130 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain BED33_21130 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain BED33_21130 IPR023211 DNA polymerase, palm domain superfamily BED33_21130 IPR036397 Ribonuclease H superfamily BED33_21130 IPR006172 DNA-directed DNA polymerase, family B BED33_21130 IPR042087 DNA polymerase family B, C-terminal domain BED33_21130 IPR012337 Ribonuclease H-like superfamily BED33_21135 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_21135 IPR022737 RNA polymerase recycling, bacterial, C-terminal BED33_21135 IPR038718 SNF2-like, N-terminal domain superfamily BED33_21135 IPR000330 SNF2-related, N-terminal domain BED33_21135 IPR040765 RapA, N-terminal Tudor like domain 1 BED33_21135 IPR040766 RapA, N-terminal Tudor-like domain 2 BED33_21135 IPR014001 Helicase superfamily 1/2, ATP-binding domain BED33_21135 IPR023949 RNA polymerase-associated protein RapA BED33_21135 IPR001650 Helicase, C-terminal BED33_21140 IPR003344 Big-1 (bacterial Ig-like domain 1) domain BED33_21140 IPR016186 C-type lectin-like/link domain superfamily BED33_21140 IPR024519 Inverse autotransporter, beta-domain BED33_21140 IPR015217 Invasin, domain 3 BED33_21140 IPR008964 Invasin/intimin cell-adhesion fragments BED33_21140 IPR013117 Intimin, C-terminal BED33_21140 IPR003535 Intimin/invasin bacterial adhesion mediator protein BED33_21140 IPR013783 Immunoglobulin-like fold BED33_21140 IPR038177 Inverse autotransporter, beta-domain superfamily BED33_21140 IPR016187 C-type lectin fold BED33_21145 IPR020103 Pseudouridine synthase, catalytic domain superfamily BED33_21145 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site BED33_21145 IPR006145 Pseudouridine synthase, RsuA/RluA BED33_21150 IPR007791 Co-chaperone DjlA, N-terminal BED33_21150 IPR029024 TerB-like BED33_21150 IPR036869 Chaperone J-domain superfamily BED33_21150 IPR023749 Co-chaperone DjlA BED33_21150 IPR001623 DnaJ domain BED33_21155 IPR005653 Organic solvent tolerance-like, N-terminal BED33_21155 IPR007543 LptD, C-terminal BED33_21155 IPR020889 LPS-assembly protein LptD BED33_21160 IPR015391 SurA N-terminal BED33_21160 IPR027304 Trigger factor/SurA domain superfamily BED33_21160 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type BED33_21160 IPR023034 Peptidyl-prolyl isomerase SurA BED33_21165 IPR005255 PdxA family BED33_21165 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase BED33_21170 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm BED33_21170 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED33_21170 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal BED33_21170 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site BED33_21170 IPR023165 rRNA adenine dimethylase-like BED33_21170 IPR011530 Ribosomal RNA adenine dimethylase BED33_21175 IPR023065 Uncharacterised protein family ApaG BED33_21175 IPR036767 ApaG domain superfamily BED33_21175 IPR007474 ApaG domain BED33_21180 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) BED33_21180 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type BED33_21180 IPR029052 Metallo-dependent phosphatase-like BED33_21185 IPR012259 Dihydrofolate reductase BED33_21185 IPR017925 Dihydrofolate reductase conserved site BED33_21185 IPR001796 Dihydrofolate reductase domain BED33_21185 IPR024072 Dihydrofolate reductase-like domain superfamily BED33_21190 IPR020914 Uncharacterised protein family UPF0442 BED33_21190 IPR024528 Threonine/Serine exporter, ThrE BED33_21195 IPR010619 Putative threonine/serine exporter BED33_21200 IPR004778 Homoserine/Threonine efflux protein BED33_21200 IPR001123 Amino acid exporter protein, LeuE-type BED33_21205 IPR016185 Pre-ATP-grasp domain superfamily BED33_21205 IPR011607 Methylglyoxal synthase-like domain BED33_21205 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily BED33_21205 IPR036914 Methylglyoxal synthase-like domain superfamily BED33_21205 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain BED33_21205 IPR011761 ATP-grasp fold BED33_21205 IPR006275 Carbamoyl-phosphate synthase, large subunit BED33_21205 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain BED33_21205 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain BED33_21205 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain BED33_21210 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain BED33_21210 IPR006274 Carbamoyl-phosphate synthase, small subunit BED33_21210 IPR029062 Class I glutamine amidotransferase-like BED33_21210 IPR017926 Glutamine amidotransferase BED33_21210 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain BED33_21210 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily BED33_21215 IPR000846 Dihydrodipicolinate reductase, N-terminal BED33_21215 IPR036291 NAD(P)-binding domain superfamily BED33_21215 IPR022663 Dihydrodipicolinate reductase, C-terminal BED33_21215 IPR023940 Dihydrodipicolinate reductase BED33_21215 IPR022664 Dihydrodipicolinate reductase, conserved site BED33_21220 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase BED33_21225 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain BED33_21230 IPR001872 Peptidase A8, signal peptidase II BED33_21235 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding BED33_21235 IPR002301 Isoleucine-tRNA ligase BED33_21235 IPR002300 Aminoacyl-tRNA synthetase, class Ia BED33_21235 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED33_21235 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding BED33_21235 IPR023585 Isoleucine-tRNA ligase, type 1 BED33_21235 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain BED33_21235 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site BED33_21235 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain BED33_21235 IPR010663 Zinc finger, FPG/IleRS-type BED33_21240 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED33_21240 IPR015864 FAD synthetase BED33_21240 IPR023465 Riboflavin kinase domain superfamily BED33_21240 IPR023468 Riboflavin kinase BED33_21240 IPR002606 Riboflavin kinase, bacterial BED33_21240 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic BED33_21250 IPR002583 Ribosomal protein S20 BED33_21250 IPR036510 Ribosomal protein S20 superfamily BED33_21255 IPR005119 LysR, substrate-binding BED33_21255 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_21255 IPR036390 Winged helix DNA-binding domain superfamily BED33_21255 IPR000847 Transcription regulator HTH, LysR BED33_21260 IPR004670 Na+/H+ antiporter NhaA BED33_21260 IPR023171 Na/H antiporter domain superfamily BED33_21265 IPR002939 Chaperone DnaJ, C-terminal BED33_21265 IPR001623 DnaJ domain BED33_21265 IPR036869 Chaperone J-domain superfamily BED33_21265 IPR008971 HSP40/DnaJ peptide-binding BED33_21265 IPR012724 Chaperone DnaJ BED33_21265 IPR018253 DnaJ domain, conserved site BED33_21265 IPR001305 Heat shock protein DnaJ, cysteine-rich domain BED33_21265 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily BED33_21270 IPR013126 Heat shock protein 70 family BED33_21270 IPR012725 Chaperone DnaK BED33_21270 IPR018181 Heat shock protein 70, conserved site BED33_21270 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily BED33_21270 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily BED33_21275 IPR000791 Acetate transporter GPR1/FUN34/SatP family BED33_21285 IPR011701 Major facilitator superfamily BED33_21285 IPR005829 Sugar transporter, conserved site BED33_21285 IPR036259 MFS transporter superfamily BED33_21285 IPR020846 Major facilitator superfamily domain BED33_21290 IPR036425 MoaB/Mog-like domain superfamily BED33_21290 IPR001453 MoaB/Mog domain BED33_21290 IPR008284 Molybdenum cofactor biosynthesis, conserved site BED33_21295 IPR013785 Aldolase-type TIM barrel BED33_21295 IPR001585 Transaldolase/Fructose-6-phosphate aldolase BED33_21295 IPR004730 Transaldolase type 1 BED33_21295 IPR018225 Transaldolase, active site BED33_21300 IPR005583 Peroxide stress protein YaaA BED33_21305 IPR003346 Transposase, IS116/IS110/IS902 BED33_21305 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED33_21310 IPR001926 Pyridoxal-phosphate dependent enzyme BED33_21310 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site BED33_21310 IPR029144 Threonine synthase, N-terminal BED33_21310 IPR037158 Threonine synthase, N-terminal domain superfamily BED33_21310 IPR004450 Threonine synthase-like BED33_21310 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BED33_21315 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BED33_21315 IPR020568 Ribosomal protein S5 domain 2-type fold BED33_21315 IPR013750 GHMP kinase, C-terminal domain BED33_21315 IPR000870 Homoserine kinase BED33_21315 IPR006203 GHMP kinase, ATP-binding, conserved site BED33_21315 IPR036554 GHMP kinase, C-terminal domain superfamily BED33_21315 IPR006204 GHMP kinase N-terminal domain BED33_21320 IPR001048 Aspartate/glutamate/uridylate kinase BED33_21320 IPR019811 Homoserine dehydrogenase, conserved site BED33_21320 IPR036291 NAD(P)-binding domain superfamily BED33_21320 IPR041743 Bifunctional aspartokinase/homoserine dehydrogenase, N-terminal catalytic domain BED33_21320 IPR002912 ACT domain BED33_21320 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding BED33_21320 IPR036393 Acetylglutamate kinase-like superfamily BED33_21320 IPR027795 CASTOR, ACT domain BED33_21320 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I BED33_21320 IPR018042 Aspartate kinase, conserved site BED33_21320 IPR001341 Aspartate kinase BED33_21320 IPR001342 Homoserine dehydrogenase, catalytic BED33_21330 IPR001789 Signal transduction response regulator, receiver domain BED33_21330 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_21330 IPR001867 OmpR/PhoB-type DNA-binding domain BED33_21330 IPR011006 CheY-like superfamily BED33_21330 IPR039420 Transcriptional regulatory protein WalR-like BED33_21330 IPR016032 Signal transduction response regulator, C-terminal effector BED33_21335 IPR010292 Uncharacterised protein family CreA BED33_21340 IPR010499 Bacterial transcription activator, effector binding BED33_21340 IPR029442 GyrI-like small molecule binding domain BED33_21340 IPR009057 Homeobox-like domain superfamily BED33_21340 IPR018060 DNA binding HTH domain, AraC-type BED33_21340 IPR011256 Regulatory factor, effector binding domain superfamily BED33_21340 IPR018062 HTH domain AraC-type, conserved site BED33_21340 IPR020449 Transcription regulator HTH, AraC- type BED33_21345 IPR023086 Phosphoglycerate mutase, GpmB, probable BED33_21345 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site BED33_21345 IPR029033 Histidine phosphatase superfamily BED33_21345 IPR013078 Histidine phosphatase superfamily, clade-1 BED33_21355 IPR000831 Trp repressor BED33_21355 IPR013335 Trp repressor, bacterial BED33_21355 IPR010921 Trp repressor/replication initiator BED33_21355 IPR038116 TrpR-like superfamily BED33_21360 IPR008939 Lytic transglycosylase, superhelical U-shaped BED33_21360 IPR000189 Prokaryotic transglycosylase, active site BED33_21360 IPR008258 Transglycosylase SLT domain 1 BED33_21360 IPR023346 Lysozyme-like domain superfamily BED33_21360 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily BED33_21360 IPR012289 Lytic transglycosylase, superhelical linker BED33_21365 IPR023214 HAD superfamily BED33_21365 IPR004014 Cation-transporting P-type ATPase, N-terminal BED33_21365 IPR023299 P-type ATPase, cytoplasmic domain N BED33_21365 IPR006068 Cation-transporting P-type ATPase, C-terminal BED33_21365 IPR036412 HAD-like superfamily BED33_21365 IPR023298 P-type ATPase, transmembrane domain superfamily BED33_21365 IPR018303 P-type ATPase, phosphorylation site BED33_21365 IPR008250 P-type ATPase, A domain superfamily BED33_21365 IPR001757 P-type ATPase BED33_21375 IPR029787 Nucleotide cyclase BED33_21375 IPR033417 Periplasmic sensor domain CHASE8 BED33_21375 IPR000160 GGDEF domain BED33_21375 IPR003660 HAMP domain BED33_21380 IPR036737 OmpA-like domain superfamily BED33_21380 IPR006664 Outer membrane protein, bacterial BED33_21380 IPR006665 OmpA-like domain BED33_21385 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_21385 IPR003593 AAA+ ATPase domain BED33_21385 IPR022374 Energy-dependent translational throttle protein EttA BED33_21385 IPR032781 ABC-transporter extension domain BED33_21385 IPR017871 ABC transporter, conserved site BED33_21385 IPR003439 ABC transporter-like BED33_21395 IPR005119 LysR, substrate-binding BED33_21395 IPR000847 Transcription regulator HTH, LysR BED33_21395 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_21395 IPR036390 Winged helix DNA-binding domain superfamily BED33_21400 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site BED33_21400 IPR013154 Alcohol dehydrogenase, N-terminal BED33_21400 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 BED33_21400 IPR011032 GroES-like superfamily BED33_21400 IPR036291 NAD(P)-binding domain superfamily BED33_21400 IPR020843 Polyketide synthase, enoylreductase domain BED33_21400 IPR013149 Alcohol dehydrogenase, C-terminal BED33_21415 IPR023190 Phosphoserine phosphatase, domain 2 BED33_21415 IPR023214 HAD superfamily BED33_21415 IPR036412 HAD-like superfamily BED33_21415 IPR041449 Phosphoserine phosphatase, N-terminal BED33_21420 IPR019305 Uncharacterised protein family Smp BED33_21425 IPR018016 Nucleoside phosphorylase, conserved site BED33_21425 IPR000845 Nucleoside phosphorylase domain BED33_21425 IPR004402 Purine nucleoside phosphorylase DeoD-type BED33_21425 IPR035994 Nucleoside phosphorylase superfamily BED33_21430 IPR017850 Alkaline-phosphatase-like, core domain superfamily BED33_21430 IPR010045 Phosphopentomutase BED33_21430 IPR006124 Metalloenzyme BED33_21430 IPR024052 Phosphopentomutase DeoB cap domain superfamily BED33_21435 IPR013465 Thymidine phosphorylase BED33_21435 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily BED33_21435 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily BED33_21435 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal BED33_21435 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic BED33_21435 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily BED33_21435 IPR017459 Glycosyl transferase family 3, N-terminal domain BED33_21435 IPR000312 Glycosyl transferase, family 3 BED33_21435 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase BED33_21435 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site BED33_21440 IPR013785 Aldolase-type TIM barrel BED33_21440 IPR023649 Deoxyribose-phosphate aldolase type II BED33_21440 IPR011343 Deoxyribose-phosphate aldolase BED33_21440 IPR002915 DeoC/FbaB/ lacD aldolase BED33_21445 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain BED33_21445 IPR008276 Concentrative nucleoside transporter BED33_21445 IPR011657 Concentrative nucleoside transporter C-terminal domain BED33_21445 IPR002668 Concentrative nucleoside transporter N-terminal domain BED33_21445 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial BED33_21450 IPR001130 TatD family BED33_21450 IPR032466 Metal-dependent hydrolase BED33_21450 IPR018228 Deoxyribonuclease, TatD-related, conserved site BED33_21455 IPR037483 YjjU-like BED33_21455 IPR002641 Patatin-like phospholipase domain BED33_21455 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase BED33_21460 IPR009760 Protein of unknown function DUF1328 BED33_21465 IPR014004 Transport-associated and nodulation domain, bacteria BED33_21465 IPR007055 BON domain BED33_21470 IPR035647 EF-G domain III/V-like BED33_21470 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_21470 IPR004548 Peptide chain release factor 3 BED33_21470 IPR032090 Peptide chain release factor 3, C-terminal BED33_21470 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily BED33_21470 IPR041732 Peptide chain release factor 3, GTP-binding domain BED33_21470 IPR004161 Translation elongation factor EFTu-like, domain 2 BED33_21470 IPR005225 Small GTP-binding protein domain BED33_21470 IPR031157 Tr-type G domain, conserved site BED33_21470 IPR000795 Transcription factor, GTP-binding domain BED33_21470 IPR009000 Translation protein, beta-barrel domain superfamily BED33_21475 IPR016181 Acyl-CoA N-acyltransferase BED33_21475 IPR000182 GNAT domain BED33_21475 IPR006464 N-acetyltransferase RimI/Ard1 BED33_21480 IPR036654 DNA polymerase III, psi subunit superfamily BED33_21480 IPR018382 DNA polymerase III, psi subunit, subgroup BED33_21480 IPR004615 DNA polymerase III, psi subunit BED33_21485 IPR013675 Methyltransferase small, N-terminal BED33_21485 IPR023543 rRNA small subunit methyltransferase C BED33_21485 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED33_21485 IPR007848 Methyltransferase small domain BED33_21485 IPR002052 DNA methylase, N-6 adenine-specific, conserved site BED33_21505 IPR009885 Protein of unknown function DUF1435 BED33_21510 IPR039435 Diguanylate cyclase DosC, globin sensor domain BED33_21510 IPR000160 GGDEF domain BED33_21510 IPR009050 Globin-like superfamily BED33_21510 IPR012292 Globin/Protoglobin BED33_21510 IPR029787 Nucleotide cyclase BED33_21515 IPR000531 TonB-dependent receptor-like, beta-barrel BED33_21515 IPR010917 TonB-dependent receptor, conserved site BED33_21515 IPR012910 TonB-dependent receptor, plug domain BED33_21515 IPR037066 TonB-dependent receptor, plug domain superfamily BED33_21515 IPR011662 Secretin/TonB, short N-terminal domain BED33_21515 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BED33_21515 IPR010916 TonB box, conserved site BED33_21515 IPR010105 TonB-dependent siderophore receptor BED33_21525 IPR002139 Ribokinase/fructokinase BED33_21525 IPR029056 Ribokinase-like BED33_21525 IPR011611 Carbohydrate kinase PfkB BED33_21525 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site BED33_21530 IPR003192 Porin, LamB-type BED33_21530 IPR036998 Porin, LamB-type superfamily BED33_21530 IPR021570 LamB-type porin N-terminal domain BED33_21535 IPR036878 Glucose permease domain IIB BED33_21535 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site BED33_21535 IPR003352 Phosphotransferase system, EIIC BED33_21535 IPR013013 Phosphotransferase system, EIIC component, type 1 BED33_21535 IPR001996 Phosphotransferase system, IIB component, type 1 BED33_21535 IPR010973 Phosphotransferase system, sucrose-specific IIBC component BED33_21535 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component BED33_21545 IPR025997 Periplasmic binding protein BED33_21545 IPR000843 LacI-type HTH domain BED33_21545 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BED33_21545 IPR012781 D-fructose-responsive transcription factor BED33_21545 IPR028082 Periplasmic binding protein-like I BED33_21550 IPR003593 AAA+ ATPase domain BED33_21550 IPR029016 GAF-like domain superfamily BED33_21550 IPR009057 Homeobox-like domain superfamily BED33_21550 IPR002197 DNA binding HTH domain, Fis-type BED33_21550 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_21550 IPR000014 PAS domain BED33_21550 IPR002078 RNA polymerase sigma factor 54 interaction domain BED33_21550 IPR013767 PAS fold BED33_21550 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BED33_21550 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BED33_21550 IPR035965 PAS domain superfamily BED33_21555 IPR000070 Pectinesterase, catalytic BED33_21555 IPR033131 Pectinesterase, Asp active site BED33_21555 IPR011050 Pectin lyase fold/virulence factor BED33_21555 IPR012334 Pectin lyase fold BED33_21580 IPR038717 Tc1-like transposase, DDE domain BED33_21580 IPR012337 Ribonuclease H-like superfamily BED33_21580 IPR009057 Homeobox-like domain superfamily BED33_21580 IPR025959 Winged helix-turn helix domain BED33_21585 IPR038152 Carbamoyltransferase, C-terminal domain superfamily BED33_21585 IPR031730 Carbamoyltransferase, C-terminal BED33_21585 IPR003696 Carbamoyltransferase BED33_21600 IPR036117 DhaL domain superfamily BED33_21600 IPR004007 DhaL domain BED33_21600 IPR012737 Dihydroxyacetone kinase, subunit L BED33_21605 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 BED33_21605 IPR004006 DhaK domain BED33_21610 IPR018211 Alcohol dehydrogenase, iron-type, conserved site BED33_21610 IPR016205 Glycerol dehydrogenase BED33_21610 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA BED33_21615 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BED33_21615 IPR001036 Acriflavin resistance protein BED33_21620 IPR006143 RND efflux pump, membrane fusion protein BED33_21620 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BED33_21625 IPR003876 Arginine deiminase BED33_21640 IPR002201 Glycosyl transferase, family 9 BED33_21640 IPR011916 Lipopolysaccharide heptosyltransferase III, putative BED33_21645 IPR018485 Carbohydrate kinase, FGGY, C-terminal BED33_21645 IPR000577 Carbohydrate kinase, FGGY BED33_21645 IPR018484 Carbohydrate kinase, FGGY, N-terminal BED33_21645 IPR033676 Autoinducer-2 kinase BED33_21650 IPR037171 NagB/RpiA transferase-like BED33_21650 IPR012318 Crp-type HTH domain BED33_21650 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_21650 IPR007324 Sugar-binding domain, putative BED33_21655 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_21655 IPR003593 AAA+ ATPase domain BED33_21655 IPR003439 ABC transporter-like BED33_21655 IPR017871 ABC transporter, conserved site BED33_21655 IPR030281 Autoinducer 2 import ATP-binding protein LsrA BED33_21660 IPR001851 ABC transporter, permease BED33_21665 IPR001851 ABC transporter, permease BED33_21670 IPR030159 Autoinducer 2 ABC transporter, substrate-binding protein LsrB BED33_21670 IPR025997 Periplasmic binding protein BED33_21670 IPR028082 Periplasmic binding protein-like I BED33_21675 IPR013785 Aldolase-type TIM barrel BED33_21675 IPR033673 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase BED33_21675 IPR041720 Aldolase FbaB-like, archaeal-type BED33_21675 IPR002915 DeoC/FbaB/ lacD aldolase BED33_21680 IPR011008 Dimeric alpha-beta barrel BED33_21680 IPR007138 Antibiotic biosynthesis monooxygenase domain BED33_21680 IPR033672 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase BED33_21690 IPR019637 Protein of unknown function DUF2501 BED33_21695 IPR001207 Transposase, mutator type BED33_21705 IPR009057 Homeobox-like domain superfamily BED33_21705 IPR002514 Transposase IS3/IS911family BED33_21715 IPR029021 Protein-tyrosine phosphatase-like BED33_21715 IPR015103 Protein-tyrosine phosphatase, YopH, N-terminal BED33_21715 IPR036484 Protein-tyrosine phosphatase, YopH, N-terminal domain superfamily BED33_21715 IPR000242 PTP type protein phosphatase BED33_21715 IPR016130 Protein-tyrosine phosphatase, active site BED33_21715 IPR000387 Tyrosine specific protein phosphatases domain BED33_21715 IPR003546 Type III secreted modular tyrosine phosphatase, SptP/YopH BED33_21715 IPR003595 Protein-tyrosine phosphatase, catalytic BED33_21720 IPR036484 Protein-tyrosine phosphatase, YopH, N-terminal domain superfamily BED33_21720 IPR015103 Protein-tyrosine phosphatase, YopH, N-terminal BED33_21725 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE BED33_21725 IPR012842 Type III secretion system HrpE/YscL BED33_21730 IPR009510 Type III secretion system, secretion protein K BED33_21735 IPR006182 Secretory protein YscJ/FliF BED33_21735 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ BED33_21740 IPR012670 Type III secretion system, YscI/HrpB BED33_21745 IPR013349 Type III secretion system effector YopR BED33_21745 IPR041814 Type III secretion system virulence factor YopR, core domain BED33_21750 IPR013348 Type III secretion system YscG BED33_21750 IPR011990 Tetratricopeptide-like helical domain superfamily BED33_21755 IPR011841 Type III secretion system, needle protein BED33_21755 IPR037203 Type III secretion, needle-protein-like superfamily BED33_21755 IPR021123 Type III secretion, needle-protein-like BED33_21760 IPR012671 Type III secretion system, secretion protein E BED33_21765 IPR032034 Yop protein translocation protein D, periplasmic domain BED33_21765 IPR000253 Forkhead-associated (FHA) domain BED33_21765 IPR008984 SMAD/FHA domain superfamily BED33_21765 IPR012843 Type III secretion system YscD/HrpQ BED33_21765 IPR032030 YscD, cytoplasmic domain BED33_21775 IPR010261 Tir chaperone protein (CesT) family BED33_21775 IPR013353 Type III secretion system chaperone YscB BED33_21780 IPR035181 Protein of unknown function DUF5463 BED33_21785 IPR020449 Transcription regulator HTH, AraC- type BED33_21785 IPR037923 Transcription regulator HTH-like BED33_21785 IPR018060 DNA binding HTH domain, AraC-type BED33_21785 IPR009057 Homeobox-like domain superfamily BED33_21785 IPR018062 HTH domain AraC-type, conserved site BED33_21795 IPR006307 Type III exporter system, secretion apparatus protein BsaZ BED33_21795 IPR006135 Type III secretion system substrate exporter BED33_21795 IPR029025 Type III secretion system substrate exporter, C-terminal BED33_21800 IPR002010 Type III secretion system inner membrane R protein BED33_21800 IPR006304 Type III secretion protein SpaR/YscT BED33_21805 IPR002191 Bacterial export protein family 3 BED33_21805 IPR006306 Type III secretion protein HrpO BED33_21815 IPR001543 Surface presentation of antigen (SpoA) BED33_21815 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO BED33_21815 IPR003283 Type III secretion system outer membrane, SpaO BED33_21815 IPR036429 SpoA-like superfamily BED33_21830 IPR009929 Type III secretion sytem,YscO BED33_21840 IPR013401 Type III secretion regulator, YopN/LcrE/InvE/MxiC BED33_21840 IPR010812 Hypersensitivity response secretion-like, HrpJ BED33_21845 IPR013351 Type III secretion system effector delivery regulator TyeA-related BED33_21845 IPR038347 TyeA superfamily BED33_21845 IPR015144 Type III secretion system effector delivery regulator TyeA BED33_21850 IPR012673 Type III secretion system chaperone SycN BED33_21855 IPR012672 Type III secretion system YscX BED33_21860 IPR011990 Tetratricopeptide-like helical domain superfamily BED33_21860 IPR016684 Type III secretion system chaperone, YscY BED33_21865 IPR042193 FHIPEP, domain 3 BED33_21865 IPR025505 FHIPEP conserved site BED33_21865 IPR001712 Type III secretion system FHIPEP BED33_21865 IPR006302 Type III secretion protein HrcV BED33_21865 IPR042194 FHIPEP, domain 1 BED33_21865 IPR042196 FHIPEP, domain 4 BED33_21870 IPR013405 Type III secretion system regulator, LcrR BED33_21870 IPR022797 Type III secretion system regulator LcrR/Chaperone CesD2 BED33_21875 IPR009863 Type III secretion protein, LcrG BED33_21880 IPR005413 Low calcium response V antigen BED33_21880 IPR036139 Virulence-associated V antigen superfamily BED33_21885 IPR011990 Tetratricopeptide-like helical domain superfamily BED33_21885 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD BED33_21885 IPR016379 Type III secretion system, low calcium response, chaperone LcrH/SycD, subgroup BED33_21885 IPR011716 Tetratricopeptide TPR-3 BED33_21885 IPR013026 Tetratricopeptide repeat-containing domain BED33_21890 IPR006972 Secretion system effector C, SseC-like BED33_21895 IPR008898 YopD-like BED33_21900 IPR001207 Transposase, mutator type BED33_21910 IPR032674 LRR-containing bacterial E3 ligase, N-terminal BED33_21910 IPR001611 Leucine-rich repeat BED33_21910 IPR032675 Leucine-rich repeat domain superfamily BED33_21910 IPR032674 LRR-containing bacterial E3 ligase, N-terminal BED33_21910 IPR032675 Leucine-rich repeat domain superfamily BED33_21910 IPR001611 Leucine-rich repeat BED33_21930 IPR010261 Tir chaperone protein (CesT) family BED33_21935 IPR038765 Papain-like cysteine peptidase superfamily BED33_21935 IPR003951 Peptidase C58, Yersinia/Haemophilus virulence surface antigen BED33_21935 IPR006473 Peptidase C58, YopT-type domain BED33_21940 IPR016505 Type III secretion system YopQ BED33_21950 IPR008874 Enterobacterial TraT complement resistance BED33_21975 IPR009057 Homeobox-like domain superfamily BED33_21975 IPR002514 Transposase IS3/IS911family BED33_21980 IPR001584 Integrase, catalytic core BED33_21980 IPR038965 Transposase InsF-like BED33_21980 IPR012337 Ribonuclease H-like superfamily BED33_21980 IPR036397 Ribonuclease H superfamily BED33_21985 IPR025296 Domain of unknown function DUF4158 BED33_21985 IPR002513 Tn3 transposase DDE domain BED33_22005 IPR003446 Plasmid replication initiation, RepA BED33_22005 IPR017837 Plasmid replication initiator, RepA, IncFII type BED33_22010 IPR019661 Replication regulatory protein RepA2 BED33_22025 IPR040668 TraI, 2B/2B-like domain BED33_22025 IPR014862 TrwC relaxase BED33_22025 IPR040987 TraI, N-terminal subdomain BED33_22025 IPR014059 Conjugative relaxase, N-terminal BED33_22025 IPR014129 Conjugative transfer relaxase protein TraI BED33_22025 IPR009767 DNA helicase, TraI type BED33_22025 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_22040 IPR029039 Flavoprotein-like superfamily BED33_22040 IPR005025 NADPH-dependent FMN reductase-like BED33_22040 IPR014063 Arsenate resistance ArsH BED33_22045 IPR001845 HTH ArsR-type DNA-binding domain BED33_22045 IPR036388 Winged helix-like DNA-binding domain superfamily BED33_22045 IPR036390 Winged helix DNA-binding domain superfamily BED33_22045 IPR011991 ArsR-like helix-turn-helix domain BED33_22045 IPR018334 ArsR-type transcription regulator, HTH motif BED33_22050 IPR000802 Arsenical pump membrane protein, ArsB BED33_22055 IPR006660 Arsenate reductase-like BED33_22055 IPR036249 Thioredoxin-like superfamily BED33_22055 IPR006659 Arsenate reductase BED33_22060 IPR006119 Resolvase, N-terminal catalytic domain BED33_22060 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily BED33_22060 IPR006120 Resolvase, HTH domain BED33_22060 IPR006118 Recombinase, conserved site BED33_22060 IPR009057 Homeobox-like domain superfamily BED33_22065 IPR025296 Domain of unknown function DUF4158 BED33_22065 IPR025296 Domain of unknown function DUF4158 BED33_22065 IPR002513 Tn3 transposase DDE domain BED33_22065 IPR002513 Tn3 transposase DDE domain BED33_22075 IPR000620 EamA domain BED33_22080 IPR011049 Serralysin-like metalloprotease, C-terminal BED33_22080 IPR008640 Head domain of trimeric autotransporter adhesin BED33_22080 IPR005594 YadA-like, C-terminal BED33_22080 IPR008126 Outer membrane adhesion, Yersinia BED33_22080 IPR008635 Coiled stalk of trimeric autotransporter adhesin BED33_22105 IPR015103 Protein-tyrosine phosphatase, YopH, N-terminal BED33_22105 IPR036484 Protein-tyrosine phosphatase, YopH, N-terminal domain superfamily BED33_22135 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_22135 IPR025669 AAA domain BED33_22140 IPR036086 ParB/Sulfiredoxin superfamily BED33_22140 IPR040873 SopB, HTH domain BED33_22140 IPR004437 ParB/RepB/Spo0J partition protein BED33_22140 IPR003115 ParB/Sulfiredoxin BED33_22145 IPR022789 Antitoxin ParD BED33_22145 IPR038296 Antitoxin ParD superfamily BED33_22145 IPR010985 Ribbon-helix-helix BED33_22155 IPR037168 Virulence factor YopE, GAP domain superfamily BED33_22155 IPR015110 YopE, N-terminal domain BED33_22155 IPR003537 Yersinia virulence determinant YopE BED33_22155 IPR014773 Virulence factor YopE, GAP domain BED33_22160 IPR005416 Type III secretion chaperone SycE BED33_22160 IPR010261 Tir chaperone protein (CesT) family BED33_22165 IPR002514 Transposase IS3/IS911family BED33_22165 IPR009057 Homeobox-like domain superfamily BED33_22180 IPR000242 PTP type protein phosphatase BED33_22180 IPR016130 Protein-tyrosine phosphatase, active site BED33_22180 IPR000387 Tyrosine specific protein phosphatases domain BED33_22180 IPR015103 Protein-tyrosine phosphatase, YopH, N-terminal BED33_22180 IPR036484 Protein-tyrosine phosphatase, YopH, N-terminal domain superfamily BED33_22180 IPR003595 Protein-tyrosine phosphatase, catalytic BED33_22180 IPR029021 Protein-tyrosine phosphatase-like BED33_22180 IPR003546 Type III secreted modular tyrosine phosphatase, SptP/YopH BED33_22185 IPR015103 Protein-tyrosine phosphatase, YopH, N-terminal BED33_22185 IPR036484 Protein-tyrosine phosphatase, YopH, N-terminal domain superfamily BED33_22190 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE BED33_22190 IPR012842 Type III secretion system HrpE/YscL BED33_22195 IPR009510 Type III secretion system, secretion protein K BED33_22200 IPR006182 Secretory protein YscJ/FliF BED33_22200 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ BED33_22205 IPR012670 Type III secretion system, YscI/HrpB BED33_22210 IPR041814 Type III secretion system virulence factor YopR, core domain BED33_22210 IPR013349 Type III secretion system effector YopR BED33_22215 IPR013348 Type III secretion system YscG BED33_22215 IPR011990 Tetratricopeptide-like helical domain superfamily BED33_22220 IPR011841 Type III secretion system, needle protein BED33_22220 IPR037203 Type III secretion, needle-protein-like superfamily BED33_22220 IPR021123 Type III secretion, needle-protein-like BED33_22225 IPR012671 Type III secretion system, secretion protein E BED33_22230 IPR000253 Forkhead-associated (FHA) domain BED33_22230 IPR008984 SMAD/FHA domain superfamily BED33_22230 IPR012843 Type III secretion system YscD/HrpQ BED33_22230 IPR032030 YscD, cytoplasmic domain BED33_22230 IPR032034 Yop protein translocation protein D, periplasmic domain BED33_22240 IPR013353 Type III secretion system chaperone YscB BED33_22240 IPR010261 Tir chaperone protein (CesT) family BED33_22245 IPR020449 Transcription regulator HTH, AraC- type BED33_22245 IPR018062 HTH domain AraC-type, conserved site BED33_22245 IPR018060 DNA binding HTH domain, AraC-type BED33_22245 IPR037923 Transcription regulator HTH-like BED33_22245 IPR009057 Homeobox-like domain superfamily BED33_22255 IPR006307 Type III exporter system, secretion apparatus protein BsaZ BED33_22255 IPR029025 Type III secretion system substrate exporter, C-terminal BED33_22255 IPR006135 Type III secretion system substrate exporter BED33_22260 IPR002010 Type III secretion system inner membrane R protein BED33_22260 IPR006304 Type III secretion protein SpaR/YscT BED33_22265 IPR002191 Bacterial export protein family 3 BED33_22265 IPR006306 Type III secretion protein HrpO BED33_22270 IPR005838 Type III secretion system inner membrane P protein BED33_22270 IPR005773 Yop virulence translocation protein R BED33_22275 IPR036429 SpoA-like superfamily BED33_22275 IPR001543 Surface presentation of antigen (SpoA) BED33_22275 IPR003283 Type III secretion system outer membrane, SpaO BED33_22275 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO BED33_22290 IPR009929 Type III secretion sytem,YscO BED33_22295 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain BED33_22295 IPR003593 AAA+ ATPase domain BED33_22295 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site BED33_22295 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain BED33_22295 IPR005714 ATPase, type III secretion system, FliI/YscN BED33_22295 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_22295 IPR040627 T3SS EscN ATPase, C-terminal BED33_22295 IPR013380 ATPase, type III secretion system, H+-transporting BED33_22300 IPR013401 Type III secretion regulator, YopN/LcrE/InvE/MxiC BED33_22300 IPR010812 Hypersensitivity response secretion-like, HrpJ BED33_22305 IPR038347 TyeA superfamily BED33_22305 IPR013351 Type III secretion system effector delivery regulator TyeA-related BED33_22305 IPR015144 Type III secretion system effector delivery regulator TyeA BED33_22310 IPR012673 Type III secretion system chaperone SycN BED33_22315 IPR012672 Type III secretion system YscX BED33_22320 IPR016684 Type III secretion system chaperone, YscY BED33_22320 IPR011990 Tetratricopeptide-like helical domain superfamily BED33_22325 IPR042194 FHIPEP, domain 1 BED33_22325 IPR042193 FHIPEP, domain 3 BED33_22325 IPR042196 FHIPEP, domain 4 BED33_22325 IPR025505 FHIPEP conserved site BED33_22325 IPR001712 Type III secretion system FHIPEP BED33_22325 IPR006302 Type III secretion protein HrcV BED33_22375 IPR002104 Integrase, catalytic domain BED33_22375 IPR013762 Integrase-like, catalytic domain superfamily BED33_22375 IPR016423 Resolvase, Rsv BED33_22375 IPR011010 DNA breaking-rejoining enzyme, catalytic core BED33_22380 IPR006119 Resolvase, N-terminal catalytic domain BED33_22380 IPR006120 Resolvase, HTH domain BED33_22380 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily BED33_22380 IPR006118 Recombinase, conserved site BED33_22385 IPR003991 Pertactin virulence factor family BED33_22385 IPR030930 Adhesin of bacterial autotransporter system BED33_22385 IPR005546 Autotransporter beta-domain BED33_22385 IPR036709 Autotransporter beta-domain superfamily BED33_22385 IPR024973 ESPR domain BED33_22385 IPR006315 Outer membrane autotransporter barrel BED33_22385 IPR012332 P22 tailspike-like, C-terminal domain superfamily BED33_22385 IPR004899 Pertactin, central region BED33_22385 IPR011050 Pectin lyase fold/virulence factor BED33_22390 IPR005565 Haemolysin activator HlyB, C-terminal BED33_22390 IPR013686 Polypeptide-transport-associated, ShlB-type BED33_22390 IPR034746 POTRA domain BED33_22390 IPR035251 ShlB, POTRA domain BED33_22390 IPR027282 Two partner secretion pathway transporter BED33_22395 IPR024973 ESPR domain BED33_22395 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat BED33_22395 IPR008638 Filamentous haemagglutinin, N-terminal BED33_22395 IPR012334 Pectin lyase fold BED33_22395 IPR011050 Pectin lyase fold/virulence factor BED33_22395 IPR025157 Hemagglutinin repeat BED33_22395 IPR006914 VENN motif-containing domain BED33_22445 IPR009057 Homeobox-like domain superfamily BED33_22445 IPR002514 Transposase IS3/IS911family BED33_22530 IPR003344 Big-1 (bacterial Ig-like domain 1) domain BED33_22530 IPR022409 PKD/Chitinase domain BED33_22530 IPR018392 LysM domain BED33_22530 IPR015217 Invasin, domain 3 BED33_22530 IPR008964 Invasin/intimin cell-adhesion fragments BED33_22530 IPR003535 Intimin/invasin bacterial adhesion mediator protein BED33_22530 IPR013783 Immunoglobulin-like fold BED33_22530 IPR038177 Inverse autotransporter, beta-domain superfamily BED33_22530 IPR024519 Inverse autotransporter, beta-domain BED33_22560 IPR011010 DNA breaking-rejoining enzyme, catalytic core BED33_22560 IPR013762 Integrase-like, catalytic domain superfamily BED33_22560 IPR002104 Integrase, catalytic domain BED33_22560 IPR016423 Resolvase, Rsv BED33_22600 IPR040668 TraI, 2B/2B-like domain BED33_22600 IPR014862 TrwC relaxase BED33_22600 IPR040987 TraI, N-terminal subdomain BED33_22600 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED33_22600 IPR009767 DNA helicase, TraI type BED33_22600 IPR014129 Conjugative transfer relaxase protein TraI BED33_22600 IPR014059 Conjugative relaxase, N-terminal BED33_22715 IPR007069 Transposase, IS801/IS1294 BED33_22715 IPR026889 Transposase zinc-binding domain BED33_22800 IPR009649 TraU BED33_22825 IPR010927 Type IV conjugative transfer system protein TraH BED33_22840 IPR011010 DNA breaking-rejoining enzyme, catalytic core BED33_22840 IPR013762 Integrase-like, catalytic domain superfamily BED33_22840 IPR002104 Integrase, catalytic domain BED33_22840 IPR016423 Resolvase, Rsv BED33_22845 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily BED33_22845 IPR006118 Recombinase, conserved site BED33_22845 IPR006119 Resolvase, N-terminal catalytic domain BED33_22845 IPR006120 Resolvase, HTH domain BED33_22850 IPR006315 Outer membrane autotransporter barrel BED33_22850 IPR005546 Autotransporter beta-domain BED33_22850 IPR036709 Autotransporter beta-domain superfamily BED33_22850 IPR003991 Pertactin virulence factor family BED33_22850 IPR004899 Pertactin, central region BED33_22850 IPR011050 Pectin lyase fold/virulence factor BED33_22850 IPR012332 P22 tailspike-like, C-terminal domain superfamily BED33_22850 IPR030930 Adhesin of bacterial autotransporter system BED33_22850 IPR024973 ESPR domain BED33_22860 IPR024973 ESPR domain BED33_22860 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat BED33_22860 IPR008638 Filamentous haemagglutinin, N-terminal BED33_22860 IPR025157 Hemagglutinin repeat BED33_22860 IPR012334 Pectin lyase fold BED33_22860 IPR011050 Pectin lyase fold/virulence factor BED33_22860 IPR006914 VENN motif-containing domain