locus-tag class description BED34_00005 IPR016423 Resolvase, Rsv BED34_00005 IPR011010 DNA breaking-rejoining enzyme, catalytic core BED34_00005 IPR002104 Integrase, catalytic domain BED34_00005 IPR013762 Integrase-like, catalytic domain superfamily BED34_00045 IPR040668 TraI, 2B/2B-like domain BED34_00045 IPR040987 TraI, N-terminal subdomain BED34_00045 IPR014862 TrwC relaxase BED34_00045 IPR009767 DNA helicase, TraI type BED34_00045 IPR014129 Conjugative transfer relaxase protein TraI BED34_00045 IPR014059 Conjugative relaxase, N-terminal BED34_00045 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_00170 IPR026889 Transposase zinc-binding domain BED34_00170 IPR007069 Transposase, IS801/IS1294 BED34_00255 IPR009649 TraU BED34_00280 IPR010927 Type IV conjugative transfer system protein TraH BED34_00295 IPR016423 Resolvase, Rsv BED34_00295 IPR002104 Integrase, catalytic domain BED34_00295 IPR013762 Integrase-like, catalytic domain superfamily BED34_00295 IPR011010 DNA breaking-rejoining enzyme, catalytic core BED34_00300 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily BED34_00300 IPR006118 Recombinase, conserved site BED34_00300 IPR006120 Resolvase, HTH domain BED34_00300 IPR006119 Resolvase, N-terminal catalytic domain BED34_00305 IPR003991 Pertactin virulence factor family BED34_00305 IPR004899 Pertactin, central region BED34_00305 IPR005546 Autotransporter beta-domain BED34_00305 IPR036709 Autotransporter beta-domain superfamily BED34_00305 IPR024973 ESPR domain BED34_00305 IPR006315 Outer membrane autotransporter barrel BED34_00305 IPR011050 Pectin lyase fold/virulence factor BED34_00305 IPR012332 P22 tailspike-like, C-terminal domain superfamily BED34_00305 IPR030930 Adhesin of bacterial autotransporter system BED34_00310 IPR005565 Haemolysin activator HlyB, C-terminal BED34_00310 IPR013686 Polypeptide-transport-associated, ShlB-type BED34_00310 IPR034746 POTRA domain BED34_00310 IPR027282 Two partner secretion pathway transporter BED34_00310 IPR035251 ShlB, POTRA domain BED34_00315 IPR025157 Hemagglutinin repeat BED34_00315 IPR024973 ESPR domain BED34_00315 IPR006914 VENN motif-containing domain BED34_00315 IPR011050 Pectin lyase fold/virulence factor BED34_00315 IPR012334 Pectin lyase fold BED34_00315 IPR008638 Filamentous haemagglutinin, N-terminal BED34_00315 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat BED34_00365 IPR002514 Transposase IS3/IS911family BED34_00365 IPR009057 Homeobox-like domain superfamily BED34_00450 IPR013117 Intimin, C-terminal BED34_00450 IPR003344 Big-1 (bacterial Ig-like domain 1) domain BED34_00450 IPR016186 C-type lectin-like/link domain superfamily BED34_00450 IPR015217 Invasin, domain 3 BED34_00450 IPR008964 Invasin/intimin cell-adhesion fragments BED34_00450 IPR038177 Inverse autotransporter, beta-domain superfamily BED34_00450 IPR003535 Intimin/invasin bacterial adhesion mediator protein BED34_00450 IPR016187 C-type lectin fold BED34_00450 IPR024519 Inverse autotransporter, beta-domain BED34_00450 IPR013783 Immunoglobulin-like fold BED34_00455 IPR022409 PKD/Chitinase domain BED34_00455 IPR018392 LysM domain BED34_00455 IPR015217 Invasin, domain 3 BED34_00455 IPR003344 Big-1 (bacterial Ig-like domain 1) domain BED34_00455 IPR038177 Inverse autotransporter, beta-domain superfamily BED34_00455 IPR024519 Inverse autotransporter, beta-domain BED34_00455 IPR013783 Immunoglobulin-like fold BED34_00455 IPR003535 Intimin/invasin bacterial adhesion mediator protein BED34_00455 IPR008964 Invasin/intimin cell-adhesion fragments BED34_00485 IPR003593 AAA+ ATPase domain BED34_00485 IPR001957 Chromosomal replication control, initiator DnaA BED34_00485 IPR020591 Chromosomal replication control, initiator DnaA-like BED34_00485 IPR010921 Trp repressor/replication initiator BED34_00485 IPR024633 DnaA N-terminal domain BED34_00485 IPR013159 Chromosomal replication initiator, DnaA C-terminal BED34_00485 IPR013317 Chromosomal replication initiator protein DnaA BED34_00485 IPR018312 Chromosomal replication control, initiator DnaA, conserved site BED34_00485 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_00485 IPR038454 DnaA, N-terminal domain superfamily BED34_00490 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal BED34_00490 IPR001001 DNA polymerase III, beta sliding clamp BED34_00490 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal BED34_00490 IPR022637 DNA polymerase III, beta sliding clamp, central BED34_00495 IPR042174 DNA-binding RecF, domain 2 BED34_00495 IPR001238 DNA-binding, RecF BED34_00495 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_00495 IPR018078 DNA-binding, RecF, conserved site BED34_00495 IPR003395 RecF/RecN/SMC, N-terminal BED34_00500 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal BED34_00500 IPR034160 DNA gyrase subunit B, TOPRIM domain BED34_00500 IPR006171 TOPRIM domain BED34_00500 IPR018522 DNA topoisomerase, type IIA, conserved site BED34_00500 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 BED34_00500 IPR013760 DNA topoisomerase, type IIA-like domain superfamily BED34_00500 IPR001241 DNA topoisomerase, type IIA BED34_00500 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BED34_00500 IPR020568 Ribosomal protein S5 domain 2-type fold BED34_00500 IPR003594 Histidine kinase/HSP90-like ATPase BED34_00500 IPR002288 DNA gyrase B subunit, C-terminal BED34_00500 IPR011557 DNA gyrase, subunit B BED34_00500 IPR041423 DNA gyrase subunit B insert domain BED34_00500 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BED34_00505 IPR023214 HAD superfamily BED34_00505 IPR006379 HAD-superfamily hydrolase, subfamily IIB BED34_00505 IPR036412 HAD-like superfamily BED34_00505 IPR000150 Cof family BED34_00510 IPR014334 Ectoine utilization protein EutC BED34_00510 IPR023401 Ornithine cyclodeaminase, N-terminal BED34_00510 IPR003462 Ornithine cyclodeaminase/mu-crystallin BED34_00510 IPR036291 NAD(P)-binding domain superfamily BED34_00515 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site BED34_00515 IPR005789 Threonine dehydratase, catabolic BED34_00515 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BED34_00515 IPR001926 Pyridoxal-phosphate dependent enzyme BED34_00520 IPR022223 Protein of unknown function DUF3748 BED34_00520 IPR011042 Six-bladed beta-propeller, TolB-like BED34_00520 IPR011659 WD40-like Beta Propeller BED34_00525 IPR010780 Protein of unknown function DUF1375 BED34_00530 IPR008978 HSP20-like chaperone BED34_00530 IPR002068 Alpha crystallin/Hsp20 domain BED34_00530 IPR037913 Small heat shock protein IbpA/IbpB, ACD domain BED34_00530 IPR023728 Small heat shock protein IbpA BED34_00535 IPR002068 Alpha crystallin/Hsp20 domain BED34_00535 IPR008978 HSP20-like chaperone BED34_00535 IPR022848 Small heat shock protein IbpB BED34_00535 IPR037913 Small heat shock protein IbpA/IbpB, ACD domain BED34_00540 IPR003346 Transposase, IS116/IS110/IS902 BED34_00540 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED34_00550 IPR018483 Carbohydrate kinase, FGGY, conserved site BED34_00550 IPR005999 Glycerol kinase BED34_00550 IPR000577 Carbohydrate kinase, FGGY BED34_00550 IPR018485 Carbohydrate kinase, FGGY, C-terminal BED34_00550 IPR018484 Carbohydrate kinase, FGGY, N-terminal BED34_00555 IPR023271 Aquaporin-like BED34_00555 IPR000425 Major intrinsic protein BED34_00555 IPR022357 Major intrinsic protein, conserved site BED34_00565 IPR009252 Cell division protein ZapB BED34_00570 IPR010203 Regulator of ribonuclease activity A BED34_00570 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein BED34_00570 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria BED34_00570 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily BED34_00575 IPR026046 UbiA prenyltransferase domain containing protein 1 BED34_00575 IPR000537 UbiA prenyltransferase family BED34_00575 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase BED34_00580 IPR019489 Clp ATPase, C-terminal BED34_00580 IPR004491 Heat shock protein HslU BED34_00580 IPR003593 AAA+ ATPase domain BED34_00580 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_00580 IPR003959 ATPase, AAA-type, core BED34_00585 IPR029055 Nucleophile aminohydrolases, N-terminal BED34_00585 IPR023333 Proteasome B-type subunit BED34_00585 IPR022281 ATP-dependent protease, HslV subunit BED34_00585 IPR001353 Proteasome, subunit alpha/beta BED34_00590 IPR007730 Sporulation-like domain BED34_00590 IPR036680 Sporulation-like domain superfamily BED34_00590 IPR011930 Cell division protein FtsN BED34_00595 IPR000843 LacI-type HTH domain BED34_00595 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BED34_00595 IPR028082 Periplasmic binding protein-like I BED34_00600 IPR041222 Primosomal protein N', 3' DNA-binding domain BED34_00600 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily BED34_00600 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_00600 IPR041236 Primosomal protein N, C-terminal domain BED34_00600 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain BED34_00600 IPR001650 Helicase, C-terminal BED34_00600 IPR014001 Helicase superfamily 1/2, ATP-binding domain BED34_00600 IPR011545 DEAD/DEAH box helicase domain BED34_00600 IPR005259 Primosomal protein N' BED34_00605 IPR042105 Ribosomal protein L31 superfamily BED34_00605 IPR027491 Ribosomal protein L31 type A BED34_00605 IPR034704 L28p-like BED34_00605 IPR002150 Ribosomal protein L31 BED34_00610 IPR010985 Ribbon-helix-helix BED34_00610 IPR002084 Methionine repressor MetJ BED34_00610 IPR023453 Methionine repressor MetJ domain superfamily BED34_00615 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme BED34_00615 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED34_00615 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED34_00615 IPR011821 O-succinylhomoserine (thiol)-lyase BED34_00615 IPR015424 Pyridoxal phosphate-dependent transferase BED34_00620 IPR041743 Bifunctional aspartokinase/homoserine dehydrogenase, N-terminal catalytic domain BED34_00620 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding BED34_00620 IPR036393 Acetylglutamate kinase-like superfamily BED34_00620 IPR001341 Aspartate kinase BED34_00620 IPR018042 Aspartate kinase, conserved site BED34_00620 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I BED34_00620 IPR001342 Homoserine dehydrogenase, catalytic BED34_00620 IPR001048 Aspartate/glutamate/uridylate kinase BED34_00620 IPR019811 Homoserine dehydrogenase, conserved site BED34_00620 IPR036291 NAD(P)-binding domain superfamily BED34_00625 IPR003171 Methylenetetrahydrofolate reductase BED34_00625 IPR004620 5,10-methylenetetrahydrofolate reductase BED34_00625 IPR029041 FAD-linked oxidoreductase-like BED34_00630 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type BED34_00630 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily BED34_00630 IPR021135 Phosphoenolpyruvate carboxylase BED34_00630 IPR033129 Phosphoenolpyruvate carboxylase, His active site BED34_00630 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site BED34_00635 IPR002933 Peptidase M20 BED34_00635 IPR011650 Peptidase M20, dimerisation domain BED34_00635 IPR036264 Bacterial exopeptidase dimerisation domain BED34_00635 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site BED34_00635 IPR010169 Acetylornithine deacetylase ArgE BED34_00640 IPR012280 Semialdehyde dehydrogenase, dimerisation domain BED34_00640 IPR000534 Semialdehyde dehydrogenase, NAD-binding BED34_00640 IPR036291 NAD(P)-binding domain superfamily BED34_00640 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site BED34_00640 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 BED34_00645 IPR036393 Acetylglutamate kinase-like superfamily BED34_00645 IPR004662 Acetylglutamate kinase family BED34_00645 IPR037528 Acetylglutamate kinase ArgB BED34_00645 IPR001048 Aspartate/glutamate/uridylate kinase BED34_00645 IPR041731 N-Acetyl-L-glutamate kinase, noncyclic BED34_00650 IPR024083 Fumarase/histidase, N-terminal BED34_00650 IPR022761 Fumarate lyase, N-terminal BED34_00650 IPR029419 Argininosuccinate lyase, C-terminal BED34_00650 IPR009049 Argininosuccinate lyase BED34_00650 IPR020557 Fumarate lyase, conserved site BED34_00650 IPR000362 Fumarate lyase family BED34_00650 IPR008948 L-Aspartase-like BED34_00680 IPR011527 ABC transporter type 1, transmembrane domain BED34_00680 IPR036640 ABC transporter type 1, transmembrane domain superfamily BED34_00680 IPR003439 ABC transporter-like BED34_00680 IPR017871 ABC transporter, conserved site BED34_00680 IPR010128 ATPase, type I secretion system, PrtD BED34_00680 IPR003593 AAA+ ATPase domain BED34_00680 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_00685 IPR006144 Secretion protein HlyD, conserved site BED34_00685 IPR010129 Type I secretion membrane fusion protein, HlyD family BED34_00705 IPR037944 Peroxiredoxin-5-like BED34_00705 IPR013740 Redoxin BED34_00705 IPR036249 Thioredoxin-like superfamily BED34_00705 IPR011906 Glutaredoxin domain BED34_00705 IPR002109 Glutaredoxin BED34_00705 IPR011767 Glutaredoxin active site BED34_00705 IPR014025 Glutaredoxin subgroup BED34_00710 IPR036390 Winged helix DNA-binding domain superfamily BED34_00710 IPR000847 Transcription regulator HTH, LysR BED34_00710 IPR005119 LysR, substrate-binding BED34_00710 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_00715 IPR022962 Soluble pyridine nucleotide transhydrogenase BED34_00715 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily BED34_00715 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I BED34_00715 IPR023753 FAD/NAD(P)-binding domain BED34_00715 IPR036188 FAD/NAD(P)-binding domain superfamily BED34_00715 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BED34_00720 IPR001647 DNA-binding HTH domain, TetR-type BED34_00720 IPR009057 Homeobox-like domain superfamily BED34_00720 IPR023764 Transcriptional repressor HTH, FabR BED34_00725 IPR009867 Protein of unknown function DUF1422 BED34_00730 IPR010280 (Uracil-5)-methyltransferase family BED34_00730 IPR030390 RNA methyltransferase TrmA, active site BED34_00730 IPR030391 RNA methyltransferase TrmA, conserved site BED34_00730 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED34_00730 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA BED34_00735 IPR000531 TonB-dependent receptor-like, beta-barrel BED34_00735 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BED34_00735 IPR010101 TonB-dependent vitamin B12 transporter BtuB BED34_00735 IPR039426 Vitamin B12 transporter BtuB-like BED34_00735 IPR012910 TonB-dependent receptor, plug domain BED34_00735 IPR037066 TonB-dependent receptor, plug domain superfamily BED34_00735 IPR010917 TonB-dependent receptor, conserved site BED34_00740 IPR004391 Glutamate racemase BED34_00740 IPR033134 Asp/Glu racemase, active site 2 BED34_00740 IPR018187 Asp/Glu racemase, active site 1 BED34_00740 IPR015942 Asp/Glu/hydantoin racemase BED34_00740 IPR001920 Asp/Glu racemase BED34_00780 IPR033893 ABC transporter periplasmic-binding protein YtfQ BED34_00780 IPR025997 Periplasmic binding protein BED34_00780 IPR028082 Periplasmic binding protein-like I BED34_00785 IPR003593 AAA+ ATPase domain BED34_00785 IPR003439 ABC transporter-like BED34_00785 IPR017871 ABC transporter, conserved site BED34_00785 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_00790 IPR001851 ABC transporter, permease BED34_00795 IPR001851 ABC transporter, permease BED34_00800 IPR000847 Transcription regulator HTH, LysR BED34_00800 IPR020890 Transcription regulator HTH, HdfR BED34_00800 IPR036390 Winged helix DNA-binding domain superfamily BED34_00800 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_00800 IPR005119 LysR, substrate-binding BED34_00805 IPR007335 Protein of unknown function DUF413 BED34_00810 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BED34_00810 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_00810 IPR000523 Magnesium chelatase ChlI domain BED34_00810 IPR020568 Ribosomal protein S5 domain 2-type fold BED34_00810 IPR025158 Mg chelatase-related protein, C-terminal domain BED34_00810 IPR004482 Mg chelatase-related protein BED34_00810 IPR003593 AAA+ ATPase domain BED34_00815 IPR000399 TPP-binding enzyme, conserved site BED34_00815 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding BED34_00815 IPR012000 Thiamine pyrophosphate enzyme, central domain BED34_00815 IPR029061 Thiamin diphosphate-binding fold BED34_00815 IPR029035 DHS-like NAD/FAD-binding domain superfamily BED34_00815 IPR039368 Acetolactate synthase large subunit, TPP binding domain BED34_00815 IPR012846 Acetolactate synthase, large subunit, biosynthetic BED34_00815 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain BED34_00820 IPR002912 ACT domain BED34_00825 IPR018300 Aminotransferase, class IV, conserved site BED34_00825 IPR036038 Aminotransferase-like, PLP-dependent enzymes BED34_00825 IPR005785 Branched-chain amino acid aminotransferase I BED34_00825 IPR001544 Aminotransferase class IV BED34_00825 IPR033939 Branched-chain aminotransferase BED34_00830 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site BED34_00830 IPR037237 IlvD/EDD, N-terminal domain BED34_00830 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase BED34_00830 IPR042096 Dihydroxy-acid dehydratase, C-terminal BED34_00830 IPR004404 Dihydroxy-acid dehydratase BED34_00835 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BED34_00835 IPR005787 Threonine dehydratase, biosynthetic BED34_00835 IPR038110 Threonine dehydratase, ACT-like domain superfamily BED34_00835 IPR001721 Threonine dehydratase, ACT-like domain BED34_00835 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site BED34_00835 IPR001926 Pyridoxal-phosphate dependent enzyme BED34_00850 IPR037404 HTH-type transcriptional activator IlvY, PBP2 domain BED34_00850 IPR005119 LysR, substrate-binding BED34_00850 IPR000847 Transcription regulator HTH, LysR BED34_00850 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_00850 IPR036390 Winged helix DNA-binding domain superfamily BED34_00855 IPR000506 Ketol-acid reductoisomerase, C-terminal BED34_00855 IPR013023 Ketol-acid reductoisomerase BED34_00855 IPR013328 6-phosphogluconate dehydrogenase, domain 2 BED34_00855 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BED34_00855 IPR013116 Ketol-acid reductoisomerase, N-terminal BED34_00855 IPR036291 NAD(P)-binding domain superfamily BED34_00865 IPR000290 Colicin immunity protein/pyocin immunity protein BED34_00865 IPR035900 Colicin E immunity protein superfamily BED34_00870 IPR000290 Colicin immunity protein/pyocin immunity protein BED34_00870 IPR035900 Colicin E immunity protein superfamily BED34_00880 IPR018046 Pili assembly chaperone, conserved site BED34_00880 IPR016148 Pili assembly chaperone, C-terminal BED34_00880 IPR008962 PapD-like superfamily BED34_00880 IPR016147 Pili assembly chaperone, N-terminal BED34_00880 IPR013783 Immunoglobulin-like fold BED34_00880 IPR036316 Pili assembly chaperone, C-terminal domain superfamily BED34_00880 IPR001829 Pili assembly chaperone, bacterial BED34_00900 IPR016147 Pili assembly chaperone, N-terminal BED34_00900 IPR018046 Pili assembly chaperone, conserved site BED34_00900 IPR016148 Pili assembly chaperone, C-terminal BED34_00900 IPR001829 Pili assembly chaperone, bacterial BED34_00900 IPR036316 Pili assembly chaperone, C-terminal domain superfamily BED34_00900 IPR008962 PapD-like superfamily BED34_00900 IPR013783 Immunoglobulin-like fold BED34_00905 IPR038717 Tc1-like transposase, DDE domain BED34_00905 IPR025959 Winged helix-turn helix domain BED34_00905 IPR009057 Homeobox-like domain superfamily BED34_00905 IPR012337 Ribonuclease H-like superfamily BED34_00915 IPR028082 Periplasmic binding protein-like I BED34_00915 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BED34_00915 IPR000843 LacI-type HTH domain BED34_00930 IPR009610 CbtA toxin of type IV toxin-antitoxin system BED34_00940 IPR001207 Transposase, mutator type BED34_00945 IPR029058 Alpha/Beta hydrolase fold BED34_00945 IPR022742 Serine aminopeptidase, S33 BED34_00945 IPR012354 Esterase/lipase BED34_00980 IPR003594 Histidine kinase/HSP90-like ATPase BED34_00980 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BED34_00980 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain BED34_00980 IPR007895 MASE1 BED34_00980 IPR005467 Histidine kinase domain BED34_00985 IPR016032 Signal transduction response regulator, C-terminal effector BED34_00985 IPR001789 Signal transduction response regulator, receiver domain BED34_00985 IPR011006 CheY-like superfamily BED34_00985 IPR000792 Transcription regulator LuxR, C-terminal BED34_00990 IPR017850 Alkaline-phosphatase-like, core domain superfamily BED34_00990 IPR012549 Phosphoethanolamine transferase, N-terminal BED34_00990 IPR040423 Phosphoethanolamine transferase BED34_00990 IPR000917 Sulfatase, N-terminal BED34_00995 IPR015946 K homology domain-like, alpha/beta BED34_00995 IPR019953 Organic hydroperoxide resistance protein famiy BED34_00995 IPR036102 OsmC/Ohr superfamily BED34_00995 IPR003718 OsmC/Ohr family BED34_01000 IPR003346 Transposase, IS116/IS110/IS902 BED34_01000 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED34_01005 IPR023765 Solute-binding protein family 5, conserved site BED34_01005 IPR030678 Peptide/nickel binding protein, MppA-type BED34_01005 IPR039424 Solute-binding protein family 5 BED34_01005 IPR000914 Solute-binding protein family 5 domain BED34_01010 IPR035906 MetI-like superfamily BED34_01010 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED34_01015 IPR025966 Oligopeptide transport permease C-like, N-terminal domain BED34_01015 IPR035906 MetI-like superfamily BED34_01015 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED34_01020 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal BED34_01020 IPR003593 AAA+ ATPase domain BED34_01020 IPR003439 ABC transporter-like BED34_01020 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_01020 IPR017871 ABC transporter, conserved site BED34_01025 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal BED34_01025 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_01025 IPR017871 ABC transporter, conserved site BED34_01025 IPR003439 ABC transporter-like BED34_01025 IPR003593 AAA+ ATPase domain BED34_01030 IPR017850 Alkaline-phosphatase-like, core domain superfamily BED34_01030 IPR017744 Cellulose biosynthesis protein BcsG BED34_01035 IPR019995 Cellulose biosynthesis, BcsF/YhjT BED34_01040 IPR017745 Cellulose biosynthesis protein BcsE BED34_01050 IPR017746 Cellulose synthase operon protein BcsQ BED34_01050 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_01055 IPR009875 PilZ domain BED34_01055 IPR029044 Nucleotide-diphospho-sugar transferases BED34_01055 IPR003919 Cellulose synthase, subunit A BED34_01055 IPR001173 Glycosyltransferase 2-like BED34_01055 IPR005150 Cellulose synthase BED34_01060 IPR018513 Cellulose synthase BcsB, bacterial BED34_01060 IPR003920 Cellulose synthase, subunit B BED34_01060 IPR008979 Galactose-binding-like domain superfamily BED34_01065 IPR019834 Glycoside hydrolase, family 8, conserved site BED34_01065 IPR002037 Glycoside hydrolase, family 8 BED34_01065 IPR012341 Six-hairpin glycosidase-like superfamily BED34_01065 IPR008928 Six-hairpin glycosidase superfamily BED34_01070 IPR008410 Cellulose synthase operon C, C-terminal BED34_01070 IPR013026 Tetratricopeptide repeat-containing domain BED34_01070 IPR011990 Tetratricopeptide-like helical domain superfamily BED34_01070 IPR019734 Tetratricopeptide repeat BED34_01080 IPR001633 EAL domain BED34_01080 IPR035919 EAL domain superfamily BED34_01080 IPR000160 GGDEF domain BED34_01080 IPR003660 HAMP domain BED34_01080 IPR029787 Nucleotide cyclase BED34_01080 IPR033419 Gammaproteobacterial periplasmic sensor domain GAPES3 BED34_01085 IPR009331 Oligogalacturonate-specific porin BED34_01090 IPR010702 Periplasmic pectate lyase BED34_01100 IPR023954 C4-dicarboxylate transport protein BED34_01100 IPR036458 Sodium:dicarboxylate symporter superfamily BED34_01100 IPR018107 Sodium:dicarboxylate symporter, conserved site BED34_01100 IPR001991 Sodium:dicarboxylate symporter BED34_01105 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like BED34_01105 IPR007863 Peptidase M16, C-terminal BED34_01105 IPR011765 Peptidase M16, N-terminal BED34_01110 IPR029056 Ribokinase-like BED34_01110 IPR011611 Carbohydrate kinase PfkB BED34_01110 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site BED34_01115 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type BED34_01115 IPR014347 Tautomerase/MIF superfamily BED34_01115 IPR004370 4-oxalocrotonate tautomerase BED34_01120 IPR035919 EAL domain superfamily BED34_01120 IPR001633 EAL domain BED34_01130 IPR003763 CDP-diacylglycerol pyrophosphatase BED34_01130 IPR038433 CDP-diacylglycerol pyrophosphatase superfamily BED34_01130 IPR036265 HIT-like superfamily BED34_01135 IPR017039 Virulence factor BrkB BED34_01135 IPR005274 Inner membrane protein YhjD BED34_01140 IPR005546 Autotransporter beta-domain BED34_01140 IPR006315 Outer membrane autotransporter barrel BED34_01140 IPR012332 P22 tailspike-like, C-terminal domain superfamily BED34_01140 IPR011050 Pectin lyase fold/virulence factor BED34_01140 IPR036709 Autotransporter beta-domain superfamily BED34_01145 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily BED34_01145 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site BED34_01145 IPR036188 FAD/NAD(P)-binding domain superfamily BED34_01145 IPR023753 FAD/NAD(P)-binding domain BED34_01145 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BED34_01145 IPR006322 Glutathione reductase, eukaryote/bacterial BED34_01145 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I BED34_01150 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED34_01150 IPR007473 Ribosomal RNA large subunit methyltransferase J BED34_01150 IPR002052 DNA methylase, N-6 adenine-specific, conserved site BED34_01155 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 BED34_01155 IPR001567 Peptidase M3A/M3B catalytic domain BED34_01160 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED34_01160 IPR007536 Ribosomal RNA small subunit methyltransferase J BED34_01165 IPR006026 Peptidase, metallopeptidase BED34_01165 IPR013858 Peptidase M10 serralysin, C-terminal BED34_01165 IPR016294 Peptidase M10B BED34_01165 IPR001818 Peptidase M10, metallopeptidase BED34_01165 IPR011049 Serralysin-like metalloprotease, C-terminal BED34_01165 IPR024079 Metallopeptidase, catalytic domain superfamily BED34_01165 IPR001343 RTX calcium-binding nonapeptide repeat BED34_01165 IPR018511 Hemolysin-type calcium-binding conserved site BED34_01165 IPR034033 Serralysin-like metallopeptidase domain BED34_01170 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal BED34_01170 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase BED34_01170 IPR033524 Leu/Phe/Val dehydrogenases active site BED34_01170 IPR036291 NAD(P)-binding domain superfamily BED34_01170 IPR033922 NAD(P) binding domain of glutamate dehydrogenase BED34_01170 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain BED34_01170 IPR014362 Glutamate dehydrogenase BED34_01175 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED34_01175 IPR006015 Universal stress protein A family BED34_01175 IPR006016 UspA BED34_01180 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED34_01180 IPR003346 Transposase, IS116/IS110/IS902 BED34_01185 IPR019598 Universal stress protein B BED34_01190 IPR001204 Phosphate transporter BED34_01195 IPR023166 HI0933-like insert domain superfamily BED34_01195 IPR036188 FAD/NAD(P)-binding domain superfamily BED34_01195 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like BED34_01200 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_01200 IPR011856 tRNA endonuclease-like domain superfamily BED34_01200 IPR014833 TnsA endonuclease, N-terminal BED34_01200 IPR014832 TnsA endonuclease C-terminal BED34_01200 IPR011335 Restriction endonuclease type II-like BED34_01200 IPR036390 Winged helix DNA-binding domain superfamily BED34_01205 IPR036397 Ribonuclease H superfamily BED34_01205 IPR012337 Ribonuclease H-like superfamily BED34_01205 IPR001584 Integrase, catalytic core BED34_01210 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_01210 IPR021542 Tn7 transposition regulator TnsC BED34_01210 IPR003593 AAA+ ATPase domain BED34_01235 IPR032874 DDE domain BED34_01235 IPR001584 Integrase, catalytic core BED34_01235 IPR012337 Ribonuclease H-like superfamily BED34_01235 IPR036397 Ribonuclease H superfamily BED34_01240 IPR027543 Lon protease, bacterial BED34_01240 IPR003593 AAA+ ATPase domain BED34_01240 IPR004815 Lon protease, bacterial/eukaryotic-type BED34_01240 IPR003111 Lon, substrate-binding domain BED34_01240 IPR003959 ATPase, AAA-type, core BED34_01240 IPR020568 Ribosomal protein S5 domain 2-type fold BED34_01240 IPR015947 PUA-like superfamily BED34_01240 IPR008269 Peptidase S16, Lon proteolytic domain BED34_01240 IPR027065 Lon protease BED34_01240 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BED34_01240 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_01260 IPR023954 C4-dicarboxylate transport protein BED34_01260 IPR036458 Sodium:dicarboxylate symporter superfamily BED34_01260 IPR001991 Sodium:dicarboxylate symporter BED34_01260 IPR018107 Sodium:dicarboxylate symporter, conserved site BED34_01275 IPR036849 Enolase-like, C-terminal domain superfamily BED34_01275 IPR006395 Methylaspartate ammonia-lyase BED34_01275 IPR022662 Methylaspartate ammonia-lyase, C-terminal BED34_01275 IPR022665 Methylaspartate ammonia-lyase, N-terminal BED34_01275 IPR029017 Enolase-like, N-terminal BED34_01280 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic BED34_01280 IPR006396 Glutamate mutase epsilon subunit BED34_01280 IPR014714 Glutamate mutase E subunit, C-terminal domain superfamily BED34_01295 IPR006204 GHMP kinase N-terminal domain BED34_01295 IPR012363 Propanediol utilisation/coumermycin biosynthesis, PduX-related BED34_01295 IPR020568 Ribosomal protein S5 domain 2-type fold BED34_01295 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BED34_01300 IPR000878 Tetrapyrrole methylase BED34_01300 IPR006366 Uroporphyrin-III C-methyltransferase BED34_01300 IPR012409 Sirohaem synthase BED34_01300 IPR028281 Siroheme synthase, central domain BED34_01300 IPR019478 Sirohaem synthase, dimerisation domain BED34_01300 IPR014777 Tetrapyrrole methylase, subdomain 1 BED34_01300 IPR014776 Tetrapyrrole methylase, subdomain 2 BED34_01300 IPR036291 NAD(P)-binding domain superfamily BED34_01300 IPR035996 Tetrapyrrole methylase superfamily BED34_01300 IPR006367 Sirohaem synthase, N-terminal BED34_01300 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site BED34_01300 IPR037115 Sirohaem synthase, dimerisation domain superfamily BED34_01305 IPR005119 LysR, substrate-binding BED34_01305 IPR000847 Transcription regulator HTH, LysR BED34_01305 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_01305 IPR036390 Winged helix DNA-binding domain superfamily BED34_01310 IPR020557 Fumarate lyase, conserved site BED34_01310 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain BED34_01310 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain BED34_01310 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily BED34_01310 IPR011167 Iron-dependent fumarate hydratase BED34_01320 IPR023214 HAD superfamily BED34_01320 IPR036412 HAD-like superfamily BED34_01320 IPR000150 Cof family BED34_01320 IPR006379 HAD-superfamily hydrolase, subfamily IIB BED34_01330 IPR005119 LysR, substrate-binding BED34_01330 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_01330 IPR000847 Transcription regulator HTH, LysR BED34_01330 IPR036390 Winged helix DNA-binding domain superfamily BED34_01335 IPR011701 Major facilitator superfamily BED34_01335 IPR020846 Major facilitator superfamily domain BED34_01335 IPR036259 MFS transporter superfamily BED34_01340 IPR016163 Aldehyde dehydrogenase, C-terminal BED34_01340 IPR016161 Aldehyde/histidinol dehydrogenase BED34_01340 IPR010061 Methylmalonate-semialdehyde dehydrogenase BED34_01340 IPR015590 Aldehyde dehydrogenase domain BED34_01340 IPR016162 Aldehyde dehydrogenase, N-terminal BED34_01340 IPR016160 Aldehyde dehydrogenase, cysteine active site BED34_01345 IPR011051 RmlC-like cupin domain superfamily BED34_01345 IPR014710 RmlC-like jelly roll fold BED34_01345 IPR021120 KduI/IolB isomerase BED34_01345 IPR023770 5-deoxy-glucuronate isomerase, Bacilli BED34_01345 IPR024203 5-deoxy-glucuronate isomerase, IolB BED34_01355 IPR030830 5-Dehydro-2-deoxygluconokinase BED34_01355 IPR022841 5-dehydro-2-deoxygluconokinase, Firmicutes BED34_01355 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site BED34_01355 IPR023314 5-Dehydro-2-deoxygluconokinase-like superfamily BED34_01355 IPR029056 Ribokinase-like BED34_01355 IPR011611 Carbohydrate kinase PfkB BED34_01360 IPR029035 DHS-like NAD/FAD-binding domain superfamily BED34_01360 IPR030817 3,5/4-Trihydroxycyclohexa-1,2-dione hydrolase BED34_01360 IPR023757 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase, Firmicutes BED34_01360 IPR029061 Thiamin diphosphate-binding fold BED34_01360 IPR012000 Thiamine pyrophosphate enzyme, central domain BED34_01360 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain BED34_01360 IPR000399 TPP-binding enzyme, conserved site BED34_01360 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding BED34_01365 IPR004104 Oxidoreductase, C-terminal BED34_01365 IPR023794 Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase BED34_01365 IPR036291 NAD(P)-binding domain superfamily BED34_01365 IPR000683 Oxidoreductase, N-terminal BED34_01370 IPR023952 Inosose dehydratase BED34_01370 IPR013022 Xylose isomerase-like, TIM barrel domain BED34_01370 IPR036237 Xylose isomerase-like superfamily BED34_01370 IPR030823 IolE/MocC family BED34_01375 IPR000182 GNAT domain BED34_01375 IPR016181 Acyl-CoA N-acyltransferase BED34_01380 IPR011051 RmlC-like cupin domain superfamily BED34_01380 IPR014710 RmlC-like jelly roll fold BED34_01380 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain BED34_01380 IPR003829 Pirin, N-terminal domain BED34_01380 IPR012093 Pirin BED34_01385 IPR000843 LacI-type HTH domain BED34_01385 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BED34_01385 IPR001761 Periplasmic binding protein/LacI sugar binding domain BED34_01385 IPR028082 Periplasmic binding protein-like I BED34_01390 IPR003474 Gluconate transporter BED34_01395 IPR006001 Carbohydrate kinase, thermoresistant glucokinase BED34_01395 IPR031322 Shikimate kinase/gluconokinase BED34_01395 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_01400 IPR002771 Multiple antibiotic resistance (MarC)-related BED34_01405 IPR012280 Semialdehyde dehydrogenase, dimerisation domain BED34_01405 IPR036291 NAD(P)-binding domain superfamily BED34_01405 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site BED34_01405 IPR000534 Semialdehyde dehydrogenase, NAD-binding BED34_01405 IPR012080 Aspartate-semialdehyde dehydrogenase BED34_01405 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type BED34_01410 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding BED34_01410 IPR000399 TPP-binding enzyme, conserved site BED34_01410 IPR029035 DHS-like NAD/FAD-binding domain superfamily BED34_01410 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain BED34_01410 IPR012000 Thiamine pyrophosphate enzyme, central domain BED34_01410 IPR029061 Thiamin diphosphate-binding fold BED34_01410 IPR012782 Acetolactate synthase, catabolic BED34_01415 IPR005128 Alpha-acetolactate decarboxylase BED34_01420 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_01420 IPR000847 Transcription regulator HTH, LysR BED34_01420 IPR005119 LysR, substrate-binding BED34_01420 IPR037410 HTH-type transcriptional regulator BudR, PBP2 domain BED34_01420 IPR036390 Winged helix DNA-binding domain superfamily BED34_01425 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region BED34_01425 IPR003018 GAF domain BED34_01425 IPR010559 Signal transduction histidine kinase, internal region BED34_01425 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BED34_01430 IPR037439 1,4-alpha-glucan-branching enzyme BED34_01430 IPR004193 Glycoside hydrolase, family 13, N-terminal BED34_01430 IPR006047 Glycosyl hydrolase, family 13, catalytic domain BED34_01430 IPR014756 Immunoglobulin E-set BED34_01430 IPR013783 Immunoglobulin-like fold BED34_01430 IPR013780 Glycosyl hydrolase, all-beta BED34_01430 IPR017853 Glycoside hydrolase superfamily BED34_01430 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB BED34_01430 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta BED34_01435 IPR013783 Immunoglobulin-like fold BED34_01435 IPR013780 Glycosyl hydrolase, all-beta BED34_01435 IPR004193 Glycoside hydrolase, family 13, N-terminal BED34_01435 IPR011837 Glycogen debranching enzyme, GlgX type BED34_01435 IPR017853 Glycoside hydrolase superfamily BED34_01435 IPR022844 Glycogen debranching enzyme, bacterial BED34_01435 IPR040784 Glycogen debranching enzyme, C-terminal domain BED34_01435 IPR014756 Immunoglobulin E-set BED34_01435 IPR006047 Glycosyl hydrolase, family 13, catalytic domain BED34_01440 IPR011004 Trimeric LpxA-like superfamily BED34_01440 IPR029044 Nucleotide-diphospho-sugar transferases BED34_01440 IPR011831 Glucose-1-phosphate adenylyltransferase BED34_01440 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial BED34_01440 IPR005835 Nucleotidyl transferase domain BED34_01440 IPR005836 ADP-glucose pyrophosphorylase, conserved site BED34_01445 IPR001296 Glycosyl transferase, family 1 BED34_01445 IPR011835 Bacterial/plant glycogen synthase BED34_01445 IPR013534 Starch synthase, catalytic domain BED34_01450 IPR011833 Glycogen/starch/alpha-glucan phosphorylase BED34_01450 IPR035090 Phosphorylase pyridoxal-phosphate attachment site BED34_01450 IPR000811 Glycosyl transferase, family 35 BED34_01455 IPR031656 Alpha-glycerophosphate oxidase, C-terminal BED34_01455 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily BED34_01455 IPR006076 FAD dependent oxidoreductase BED34_01455 IPR036188 FAD/NAD(P)-binding domain superfamily BED34_01455 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase BED34_01465 IPR003346 Transposase, IS116/IS110/IS902 BED34_01465 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED34_01470 IPR014036 DeoR C-terminal sensor domain BED34_01470 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_01470 IPR018356 Transcription regulator, HTH DeoR-type, conserved site BED34_01470 IPR037171 NagB/RpiA transferase-like BED34_01470 IPR001034 DeoR-type HTH domain BED34_01470 IPR036390 Winged helix DNA-binding domain superfamily BED34_01475 IPR038236 GlpG peptidase, N-terminal domain superfamily BED34_01475 IPR022732 Peptidase S54, GlpG peptidase, N-terminal BED34_01475 IPR022764 Peptidase S54, rhomboid domain BED34_01475 IPR023662 Rhomboid protease GlpG BED34_01475 IPR035952 Rhomboid-like superfamily BED34_01480 IPR023695 Thiosulfate sulfurtransferase, bacterial BED34_01480 IPR036873 Rhodanese-like domain superfamily BED34_01480 IPR001763 Rhodanese-like domain BED34_01490 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_01490 IPR000792 Transcription regulator LuxR, C-terminal BED34_01490 IPR023768 Transcriptional regulator HTH-type, MalT BED34_01490 IPR041617 MalT-like TPR region BED34_01490 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_01490 IPR016032 Signal transduction response regulator, C-terminal effector BED34_01490 IPR011990 Tetratricopeptide-like helical domain superfamily BED34_01495 IPR035090 Phosphorylase pyridoxal-phosphate attachment site BED34_01495 IPR011833 Glycogen/starch/alpha-glucan phosphorylase BED34_01495 IPR000811 Glycosyl transferase, family 35 BED34_01500 IPR003385 Glycoside hydrolase, family 77 BED34_01500 IPR017853 Glycoside hydrolase superfamily BED34_01505 IPR017726 Fe/S biogenesis protein NfuA BED34_01505 IPR000361 FeS cluster biogenesis BED34_01505 IPR034904 Fe-S cluster assembly domain superfamily BED34_01505 IPR035903 HesB-like domain superfamily BED34_01505 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal BED34_01510 IPR029057 Phosphoribosyltransferase-like BED34_01510 IPR000836 Phosphoribosyltransferase domain BED34_01510 IPR005222 Competence protein ComF BED34_01515 IPR029058 Alpha/Beta hydrolase fold BED34_01515 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase BED34_01515 IPR000073 Alpha/beta hydrolase fold-1 BED34_01520 IPR010854 Domain of unknown function DUF1471 BED34_01520 IPR036275 YdgH-like superfamily BED34_01520 IPR025543 Dodecin-like BED34_01525 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED34_01525 IPR003346 Transposase, IS116/IS110/IS902 BED34_01530 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_01530 IPR036390 Winged helix DNA-binding domain superfamily BED34_01530 IPR023732 Probable [Fe-S]-dependent transcriptional repressor BED34_01530 IPR015102 Transcriptional regulator HTH-type, FeoC BED34_01535 IPR011640 Ferrous iron transport protein B, C-terminal BED34_01535 IPR041069 FeoB, cytosolic helical domain BED34_01535 IPR030389 FeoB-type guanine nucleotide-binding (G) domain BED34_01535 IPR003373 Ferrous iron transport protein B BED34_01535 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain BED34_01535 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_01540 IPR008988 Transcriptional repressor, C-terminal BED34_01540 IPR007167 Ferrous iron transporter FeoA domain BED34_01540 IPR038157 Ferrous iron transporter, core domain BED34_01545 IPR032639 Tex protein, YqgF-like domain BED34_01545 IPR023319 Tex-like protein, HTH domain superfamily BED34_01545 IPR041692 HHH domain 9 BED34_01545 IPR006641 YqgF/RNase H-like domain BED34_01545 IPR037027 YqgF/RNase H-like domain superfamily BED34_01545 IPR018974 Tex-like protein, N-terminal BED34_01545 IPR023323 Tex-like domain superfamily BED34_01545 IPR022967 RNA-binding domain, S1 BED34_01545 IPR012337 Ribonuclease H-like superfamily BED34_01545 IPR010994 RuvA domain 2-like BED34_01545 IPR012340 Nucleic acid-binding, OB-fold BED34_01545 IPR003029 S1 domain BED34_01570 IPR028624 Transcription elongation factor GreA/GreB BED34_01570 IPR023459 Transcription elongation factor GreA/GreB family BED34_01570 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal BED34_01570 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily BED34_01570 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal BED34_01570 IPR018151 Transcription elongation factor, GreA/GreB, conserved site BED34_01570 IPR006358 Transcription elongation factor GreB BED34_01570 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily BED34_01575 IPR011006 CheY-like superfamily BED34_01575 IPR001867 OmpR/PhoB-type DNA-binding domain BED34_01575 IPR016032 Signal transduction response regulator, C-terminal effector BED34_01575 IPR001789 Signal transduction response regulator, receiver domain BED34_01575 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_01575 IPR039420 Transcriptional regulatory protein WalR-like BED34_01580 IPR003594 Histidine kinase/HSP90-like ATPase BED34_01580 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BED34_01580 IPR003660 HAMP domain BED34_01580 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BED34_01580 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BED34_01580 IPR005467 Histidine kinase domain BED34_01580 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BED34_01585 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising BED34_01585 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site BED34_01585 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal BED34_01585 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal BED34_01590 IPR016154 Heat shock protein Hsp33, C-terminal BED34_01590 IPR016153 Heat shock protein Hsp33, N-terminal BED34_01590 IPR000397 Heat shock protein Hsp33 BED34_01590 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily BED34_01595 IPR002942 RNA-binding S4 domain BED34_01595 IPR025708 Heat shock protein 15 BED34_01595 IPR036986 RNA-binding S4 domain superfamily BED34_01600 IPR023214 HAD superfamily BED34_01600 IPR041492 Haloacid dehalogenase-like hydrolase BED34_01600 IPR036412 HAD-like superfamily BED34_01600 IPR006439 HAD hydrolase, subfamily IA BED34_01605 IPR010771 Intracellular growth attenuator IgaA BED34_01610 IPR015797 NUDIX hydrolase-like domain superfamily BED34_01610 IPR020084 NUDIX hydrolase, conserved site BED34_01610 IPR000086 NUDIX hydrolase domain BED34_01615 IPR012338 Beta-lactamase/transpeptidase-like BED34_01615 IPR001264 Glycosyl transferase, family 51 BED34_01615 IPR036950 Penicillin binding protein transglycosylase domain BED34_01615 IPR031376 Penicillin-binding protein, OB-like domain BED34_01615 IPR023346 Lysozyme-like domain superfamily BED34_01615 IPR001460 Penicillin-binding protein, transpeptidase BED34_01640 IPR004846 Type II/III secretion system BED34_01640 IPR011662 Secretin/TonB, short N-terminal domain BED34_01640 IPR013355 Type IV pilus secretin PilQ BED34_01640 IPR038591 NolW-like superfamily BED34_01640 IPR005644 NolW-like BED34_01640 IPR001775 GspD/PilQ family BED34_01640 IPR004845 Type II secretion system GspD, conserved site BED34_01645 IPR023000 Shikimate kinase, conserved site BED34_01645 IPR000623 Shikimate kinase/Threonine synthase-like 1 BED34_01645 IPR031322 Shikimate kinase/gluconokinase BED34_01645 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_01650 IPR030963 3-dehydroquinate synthase family BED34_01650 IPR030960 3-dehydroquinate synthase domain BED34_01650 IPR016037 3-dehydroquinate synthase AroB BED34_01655 IPR036680 Sporulation-like domain superfamily BED34_01655 IPR007730 Sporulation-like domain BED34_01660 IPR023095 Adenine-specific methyltransferase, domain 2 BED34_01660 IPR002052 DNA methylase, N-6 adenine-specific, conserved site BED34_01660 IPR012327 D12 class N6 adenine-specific DNA methyltransferase BED34_01660 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED34_01660 IPR012263 Adenine modification methylase, M.EcoRV-type BED34_01665 IPR026019 Ribulose-phosphate 3-epimerase BED34_01665 IPR000056 Ribulose-phosphate 3-epimerase-like BED34_01665 IPR011060 Ribulose-phosphate binding barrel BED34_01665 IPR013785 Aldolase-type TIM barrel BED34_01675 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site BED34_01675 IPR024109 Tryptophan-tRNA ligase, bacterial-type BED34_01675 IPR002305 Aminoacyl-tRNA synthetase, class Ic BED34_01675 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED34_01675 IPR002306 Tryptophan-tRNA ligase BED34_01680 IPR035996 Tetrapyrrole methylase superfamily BED34_01680 IPR006367 Sirohaem synthase, N-terminal BED34_01680 IPR014777 Tetrapyrrole methylase, subdomain 1 BED34_01680 IPR014776 Tetrapyrrole methylase, subdomain 2 BED34_01680 IPR000878 Tetrapyrrole methylase BED34_01680 IPR012409 Sirohaem synthase BED34_01680 IPR036291 NAD(P)-binding domain superfamily BED34_01680 IPR006366 Uroporphyrin-III C-methyltransferase BED34_01680 IPR019478 Sirohaem synthase, dimerisation domain BED34_01680 IPR028281 Siroheme synthase, central domain BED34_01680 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site BED34_01680 IPR037115 Sirohaem synthase, dimerisation domain superfamily BED34_01690 IPR017881 Nitrite reductase (NADH) small subunit BED34_01690 IPR012748 Rieske-like [2Fe-2S] domain, NirD-type BED34_01690 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily BED34_01695 IPR007419 BFD-like [2Fe-2S]-binding domain BED34_01695 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily BED34_01695 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain BED34_01695 IPR017121 Nitrite reductase [NAD(P)H], large subunit BED34_01695 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB BED34_01695 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site BED34_01695 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain BED34_01695 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal BED34_01695 IPR036188 FAD/NAD(P)-binding domain superfamily BED34_01695 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily BED34_01695 IPR023753 FAD/NAD(P)-binding domain BED34_01700 IPR032466 Metal-dependent hydrolase BED34_01700 IPR011059 Metal-dependent hydrolase, composite domain superfamily BED34_01700 IPR013108 Amidohydrolase 3 BED34_01705 IPR011701 Major facilitator superfamily BED34_01705 IPR036259 MFS transporter superfamily BED34_01705 IPR023528 Major facilitator superfamily transporter, TsgA BED34_01705 IPR020846 Major facilitator superfamily domain BED34_01710 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BED34_01710 IPR000843 LacI-type HTH domain BED34_01710 IPR028082 Periplasmic binding protein-like I BED34_01715 IPR036291 NAD(P)-binding domain superfamily BED34_01715 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal BED34_01715 IPR022616 Glycosyl hydrolase, family 4, C-terminal BED34_01715 IPR001088 Glycoside hydrolase, family 4 BED34_01715 IPR019802 Glycoside hydrolase, family 4, conserved site BED34_01720 IPR029000 Cyclophilin-like domain superfamily BED34_01720 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site BED34_01720 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain BED34_01725 IPR033186 Helicase HerA-like C-terminal BED34_01725 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_01730 IPR029062 Class I glutamine amidotransferase-like BED34_01730 IPR017926 Glutamine amidotransferase BED34_01730 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain BED34_01735 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria BED34_01735 IPR015424 Pyridoxal phosphate-dependent transferase BED34_01735 IPR005814 Aminotransferase class-III BED34_01735 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED34_01735 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED34_01735 IPR004636 Acetylornithine/Succinylornithine transaminase family BED34_01745 IPR036390 Winged helix DNA-binding domain superfamily BED34_01745 IPR018490 Cyclic nucleotide-binding-like BED34_01745 IPR018488 Cyclic nucleotide-binding, conserved site BED34_01745 IPR018335 Transcription regulator HTH, Crp-type, conserved site BED34_01745 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_01745 IPR012318 Crp-type HTH domain BED34_01745 IPR014710 RmlC-like jelly roll fold BED34_01745 IPR000595 Cyclic nucleotide-binding domain BED34_01750 IPR003718 OsmC/Ohr family BED34_01750 IPR036102 OsmC/Ohr superfamily BED34_01750 IPR015946 K homology domain-like, alpha/beta BED34_01755 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_01755 IPR006082 Phosphoribulokinase BED34_01755 IPR006083 Phosphoribulokinase/uridine kinase BED34_01760 IPR010648 Uncharacterised protein family UPF0270 BED34_01760 IPR036685 YehU-like superfamily BED34_01765 IPR012020 AB hydrolase 4 family BED34_01765 IPR029058 Alpha/Beta hydrolase fold BED34_01765 IPR000073 Alpha/beta hydrolase fold-1 BED34_01765 IPR000952 AB hydrolase 4, conserved site BED34_01770 IPR001123 Amino acid exporter protein, LeuE-type BED34_01775 IPR003719 Phenazine biosynthesis PhzF protein BED34_01780 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain BED34_01780 IPR010068 Taurine ABC transporter, substrate-binding protein TauA BED34_01780 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BED34_01790 IPR035906 MetI-like superfamily BED34_01790 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED34_01795 IPR003819 TauD/TfdA-like domain BED34_01795 IPR042098 Taurine dioxygenase TauD-like superfamily BED34_01805 IPR029044 Nucleotide-diphospho-sugar transferases BED34_01805 IPR001173 Glycosyltransferase 2-like BED34_01810 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_01810 IPR003593 AAA+ ATPase domain BED34_01810 IPR032781 ABC-transporter extension domain BED34_01810 IPR003439 ABC transporter-like BED34_01810 IPR017871 ABC transporter, conserved site BED34_01815 IPR029039 Flavoprotein-like superfamily BED34_01815 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG BED34_01815 IPR003680 Flavodoxin-like fold BED34_01820 IPR004771 K+/H+ exchanger BED34_01820 IPR020884 Glutathione-regulated potassium-efflux system protein KefB BED34_01820 IPR006153 Cation/H+ exchanger BED34_01820 IPR036291 NAD(P)-binding domain superfamily BED34_01820 IPR003148 Regulator of K+ conductance, N-terminal BED34_01820 IPR038770 Sodium/solute symporter superfamily BED34_01825 IPR012658 Conserved hypothetical protein CHP02443 BED34_01830 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain BED34_01835 IPR007236 SlyX BED34_01840 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain BED34_01840 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal BED34_01840 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily BED34_01845 IPR039445 Transcriptional regulator DauR-like, HTH domain BED34_01845 IPR013559 YheO-like BED34_01845 IPR039446 Transcriptional regulator DauR-like BED34_01850 IPR027396 DsrEFH-like BED34_01850 IPR017463 Sulphur relay, TusD/DsrE BED34_01850 IPR003787 Sulphur relay, DsrE/F-like protein BED34_01855 IPR017462 Sulphur relay, TusC/DsrF BED34_01855 IPR003787 Sulphur relay, DsrE/F-like protein BED34_01855 IPR027396 DsrEFH-like BED34_01855 IPR037450 Sulphur relay, TusC BED34_01860 IPR023526 Sulphur relay, TusB BED34_01860 IPR007215 Sulphur relay, TusB/DsrH BED34_01860 IPR027396 DsrEFH-like BED34_01865 IPR012340 Nucleic acid-binding, OB-fold BED34_01865 IPR006032 Ribosomal protein S12/S23 BED34_01865 IPR005679 Ribosomal protein S12, bacterial-type BED34_01870 IPR036823 Ribosomal protein S7 domain superfamily BED34_01870 IPR023798 Ribosomal protein S7 domain BED34_01870 IPR020606 Ribosomal protein S7, conserved site BED34_01870 IPR005717 Ribosomal protein S7, bacterial/organellar-type BED34_01870 IPR000235 Ribosomal protein S5/S7 BED34_01875 IPR035649 EFG, domain V BED34_01875 IPR000640 Elongation factor EFG, domain V-like BED34_01875 IPR004161 Translation elongation factor EFTu-like, domain 2 BED34_01875 IPR031157 Tr-type G domain, conserved site BED34_01875 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_01875 IPR020568 Ribosomal protein S5 domain 2-type fold BED34_01875 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BED34_01875 IPR041095 Elongation Factor G, domain II BED34_01875 IPR035647 EF-G domain III/V-like BED34_01875 IPR009022 Elongation factor G, domain III BED34_01875 IPR005225 Small GTP-binding protein domain BED34_01875 IPR000795 Transcription factor, GTP-binding domain BED34_01875 IPR009000 Translation protein, beta-barrel domain superfamily BED34_01875 IPR004540 Translation elongation factor EFG/EF2 BED34_01875 IPR005517 Translation elongation factor EFG/EF2, domain IV BED34_01885 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily BED34_01885 IPR007419 BFD-like [2Fe-2S]-binding domain BED34_01890 IPR012347 Ferritin-like BED34_01890 IPR009040 Ferritin-like diiron domain BED34_01890 IPR009078 Ferritin-like superfamily BED34_01890 IPR008331 Ferritin/DPS protein domain BED34_01890 IPR002024 Bacterioferritin BED34_01895 IPR036838 Ribosomal protein S10 domain superfamily BED34_01895 IPR018268 Ribosomal protein S10, conserved site BED34_01895 IPR001848 Ribosomal protein S10 BED34_01895 IPR027486 Ribosomal protein S10 domain BED34_01900 IPR009000 Translation protein, beta-barrel domain superfamily BED34_01900 IPR019927 Ribosomal protein L3, bacterial/organelle-type BED34_01900 IPR000597 Ribosomal protein L3 BED34_01900 IPR019926 Ribosomal protein L3, conserved site BED34_01905 IPR023574 Ribosomal protein L4 domain superfamily BED34_01905 IPR013005 50S ribosomal protein uL4 BED34_01905 IPR002136 Ribosomal protein L4/L1e BED34_01910 IPR013025 Ribosomal protein L25/L23 BED34_01910 IPR001014 Ribosomal protein L23/L25, conserved site BED34_01910 IPR012678 Ribosomal protein L23/L15e core domain superfamily BED34_01910 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily BED34_01915 IPR022666 Ribosomal Proteins L2, RNA binding domain BED34_01915 IPR014722 Ribosomal protein L2, domain 2 BED34_01915 IPR022669 Ribosomal protein L2, C-terminal BED34_01915 IPR008991 Translation protein SH3-like domain superfamily BED34_01915 IPR014726 Ribosomal protein L2, domain 3 BED34_01915 IPR002171 Ribosomal protein L2 BED34_01915 IPR005880 Ribosomal protein L2, bacterial/organellar-type BED34_01915 IPR022671 Ribosomal protein L2, conserved site BED34_01915 IPR012340 Nucleic acid-binding, OB-fold BED34_01920 IPR023575 Ribosomal protein S19, superfamily BED34_01920 IPR020934 Ribosomal protein S19 conserved site BED34_01920 IPR005732 Ribosomal protein S19, bacterial-type BED34_01920 IPR002222 Ribosomal protein S19/S15 BED34_01925 IPR001063 Ribosomal protein L22/L17 BED34_01925 IPR018260 Ribosomal protein L22/L17, conserved site BED34_01925 IPR036394 Ribosomal protein L22/L17 superfamily BED34_01925 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type BED34_01930 IPR018280 Ribosomal protein S3, conserved site BED34_01930 IPR036419 Ribosomal protein S3, C-terminal domain superfamily BED34_01930 IPR005704 Ribosomal protein S3, bacterial-type BED34_01930 IPR001351 Ribosomal protein S3, C-terminal BED34_01930 IPR004087 K Homology domain BED34_01930 IPR009019 K homology domain superfamily, prokaryotic type BED34_01930 IPR004044 K Homology domain, type 2 BED34_01930 IPR015946 K homology domain-like, alpha/beta BED34_01935 IPR020798 Ribosomal protein L16, conserved site BED34_01935 IPR000114 Ribosomal protein L16 BED34_01935 IPR016180 Ribosomal protein L10e/L16 BED34_01935 IPR036920 Ribosomal protein L10e/L16 superfamily BED34_01940 IPR001854 Ribosomal protein L29/L35 BED34_01940 IPR036049 Ribosomal protein L29/L35 superfamily BED34_01945 IPR000266 Ribosomal protein S17/S11 BED34_01945 IPR019979 Ribosomal protein S17, conserved site BED34_01945 IPR012340 Nucleic acid-binding, OB-fold BED34_01945 IPR019984 30S ribosomal protein S17 BED34_01950 IPR000218 Ribosomal protein L14P BED34_01950 IPR019972 Ribosomal protein L14P, conserved site BED34_01950 IPR005745 Ribosomal protein L14P, bacterial-type BED34_01950 IPR036853 Ribosomal protein L14 superfamily BED34_01955 IPR005824 KOW BED34_01955 IPR008991 Translation protein SH3-like domain superfamily BED34_01955 IPR005825 Ribosomal protein L24/L26, conserved site BED34_01955 IPR003256 Ribosomal protein L24 BED34_01955 IPR014722 Ribosomal protein L2, domain 2 BED34_01955 IPR041988 Ribosomal Protein L26/L24, KOW domain BED34_01960 IPR031309 Ribosomal protein L5, C-terminal BED34_01960 IPR022803 Ribosomal protein L5 domain superfamily BED34_01960 IPR031310 Ribosomal protein L5, N-terminal BED34_01960 IPR002132 Ribosomal protein L5 BED34_01960 IPR020930 Ribosomal protein L5, bacterial-type BED34_01965 IPR018271 Ribosomal protein S14, conserved site BED34_01965 IPR001209 Ribosomal protein S14 BED34_01965 IPR023036 Ribosomal protein S14, bacterial/plastid BED34_01970 IPR000630 Ribosomal protein S8 BED34_01970 IPR035987 Ribosomal protein S8 superfamily BED34_01975 IPR020040 Ribosomal protein L6, alpha-beta domain BED34_01975 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily BED34_01975 IPR019906 Ribosomal protein L6, bacterial-type BED34_01975 IPR000702 Ribosomal protein L6 BED34_01975 IPR002358 Ribosomal protein L6, conserved site BED34_01980 IPR004389 Ribosomal protein L18, bacterial-type BED34_01980 IPR005484 Ribosomal protein L18 BED34_01985 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BED34_01985 IPR005324 Ribosomal protein S5, C-terminal BED34_01985 IPR020568 Ribosomal protein S5 domain 2-type fold BED34_01985 IPR005712 Ribosomal protein S5, bacterial-type BED34_01985 IPR013810 Ribosomal protein S5, N-terminal BED34_01985 IPR018192 Ribosomal protein S5, N-terminal, conserved site BED34_01985 IPR000851 Ribosomal protein S5 BED34_01990 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain BED34_01990 IPR018038 Ribosomal protein L30, conserved site BED34_01990 IPR005996 Ribosomal protein L30, bacterial-type BED34_01990 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily BED34_01995 IPR036227 Ribosomal L18e/L15P superfamily BED34_01995 IPR005749 Ribosomal protein L15, bacterial-type BED34_01995 IPR030878 Ribosomal protein L15 BED34_01995 IPR001196 Ribosomal protein L15, conserved site BED34_01995 IPR021131 Ribosomal protein L18e/L15P BED34_02000 IPR026593 Protein translocase subunit SecY BED34_02000 IPR030659 SecY conserved site BED34_02000 IPR023201 SecY domain superfamily BED34_02000 IPR002208 SecY/SEC61-alpha family BED34_02005 IPR035977 Ribosomal protein L36 superfamily BED34_02005 IPR000473 Ribosomal protein L36 BED34_02015 IPR036967 Ribosomal protein S11 superfamily BED34_02015 IPR019981 Ribosomal protein S11, bacterial-type BED34_02015 IPR001971 Ribosomal protein S11 BED34_02015 IPR018102 Ribosomal S11, conserved site BED34_02020 IPR005709 Ribosomal protein S4, bacterial-type BED34_02020 IPR018079 Ribosomal protein S4, conserved site BED34_02020 IPR002942 RNA-binding S4 domain BED34_02020 IPR022801 Ribosomal protein S4/S9 BED34_02020 IPR036986 RNA-binding S4 domain superfamily BED34_02020 IPR001912 Ribosomal protein S4/S9, N-terminal BED34_02025 IPR011262 DNA-directed RNA polymerase, insert domain BED34_02025 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type BED34_02025 IPR011260 RNA polymerase, alpha subunit, C-terminal BED34_02025 IPR036643 DNA-directed RNA polymerase, insert domain superfamily BED34_02025 IPR036603 RNA polymerase, RBP11-like subunit BED34_02025 IPR011773 DNA-directed RNA polymerase, alpha subunit BED34_02030 IPR000456 Ribosomal protein L17 BED34_02030 IPR036373 Ribosomal protein L17 superfamily BED34_02035 IPR018961 DnaJ homologue, subfamily C, member 28, conserved domain BED34_02040 IPR009061 Putative DNA-binding domain superfamily BED34_02040 IPR000551 MerR-type HTH domain BED34_02040 IPR011788 Zn(II)-responsive transcriptional regulator BED34_02045 IPR005589 Alternative ribosome-rescue factor A BED34_02055 IPR036019 Gated mechanosensitive channel BED34_02055 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L BED34_02055 IPR001185 Large-conductance mechanosensitive channel BED34_02055 IPR019823 Large-conductance mechanosensitive channel, conserved site BED34_02060 IPR006036 Potassium uptake protein TrkA BED34_02060 IPR006037 Regulator of K+ conductance, C-terminal BED34_02060 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily BED34_02060 IPR003148 Regulator of K+ conductance, N-terminal BED34_02060 IPR036291 NAD(P)-binding domain superfamily BED34_02065 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type BED34_02065 IPR035926 NusB-like superfamily BED34_02065 IPR006027 NusB/RsmB/TIM44 BED34_02065 IPR004573 rRNA small subunit methyltransferase B BED34_02065 IPR023541 rRNA small subunit methyltransferase B, enterobacteriaceae BED34_02065 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED34_02065 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site BED34_02065 IPR023267 RNA (C5-cytosine) methyltransferase BED34_02070 IPR001555 Phosphoribosylglycinamide formyltransferase, active site BED34_02070 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain BED34_02070 IPR011034 Formyl transferase-like, C-terminal domain superfamily BED34_02070 IPR036477 Formyl transferase, N-terminal domain superfamily BED34_02070 IPR002376 Formyl transferase, N-terminal BED34_02070 IPR005794 Methionyl-tRNA formyltransferase BED34_02070 IPR005793 Formyl transferase, C-terminal BED34_02070 IPR037022 Formyl transferase, C-terminal domain superfamily BED34_02075 IPR023635 Peptide deformylase BED34_02075 IPR036821 Peptide deformylase superfamily BED34_02080 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_02080 IPR041614 DprA, winged helix domain BED34_02080 IPR003488 DNA recombination-mediator protein A BED34_02085 IPR007456 Smg BED34_02090 IPR013498 DNA topoisomerase, type IA, zn finger BED34_02090 IPR000380 DNA topoisomerase, type IA BED34_02095 IPR023535 Threonylcarbamoyl-AMP synthase BED34_02095 IPR006070 YrdC-like domain BED34_02095 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily BED34_02100 IPR036291 NAD(P)-binding domain superfamily BED34_02100 IPR041121 SDH, C-terminal BED34_02100 IPR011342 Shikimate dehydrogenase BED34_02100 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal BED34_02100 IPR022893 Shikimate dehydrogenase family BED34_02100 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase BED34_02105 IPR001451 Hexapeptide repeat BED34_02105 IPR011004 Trimeric LpxA-like superfamily BED34_02135 IPR003346 Transposase, IS116/IS110/IS902 BED34_02135 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED34_02140 IPR033752 MetA family BED34_02140 IPR005697 Homoserine O-succinyltransferase MetA BED34_02140 IPR029062 Class I glutamine amidotransferase-like BED34_02145 IPR019830 Malate synthase, conserved site BED34_02145 IPR001465 Malate synthase BED34_02145 IPR011076 Malate synthase-like superfamily BED34_02145 IPR006252 Malate synthase A BED34_02150 IPR040442 Pyruvate kinase-like domain superfamily BED34_02150 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily BED34_02150 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site BED34_02150 IPR006254 Isocitrate lyase BED34_02150 IPR039556 ICL/PEPM domain BED34_02155 IPR010452 Isocitrate dehydrogenase kinasephosphatase BED34_02160 IPR036390 Winged helix DNA-binding domain superfamily BED34_02160 IPR014757 Transcription regulator IclR, C-terminal BED34_02160 IPR005471 Transcription regulator IclR, N-terminal BED34_02160 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_02160 IPR029016 GAF-like domain superfamily BED34_02165 IPR033706 Methionine synthase, B12-binding domain BED34_02165 IPR011822 Cobalamin-dependent methionine synthase BED34_02165 IPR011005 Dihydropteroate synthase-like BED34_02165 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain BED34_02165 IPR000489 Pterin-binding domain BED34_02165 IPR004223 Vitamin B12-dependent methionine synthase, activation domain BED34_02165 IPR003726 Homocysteine-binding domain BED34_02165 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily BED34_02165 IPR036724 Cobalamin-binding domain superfamily BED34_02165 IPR006158 Cobalamin (vitamin B12)-binding domain BED34_02165 IPR036589 Homocysteine-binding domain superfamily BED34_02165 IPR036594 Methionine synthase domain BED34_02170 IPR008638 Filamentous haemagglutinin, N-terminal BED34_02170 IPR012334 Pectin lyase fold BED34_02170 IPR025157 Hemagglutinin repeat BED34_02170 IPR011050 Pectin lyase fold/virulence factor BED34_02175 IPR005565 Haemolysin activator HlyB, C-terminal BED34_02175 IPR027282 Two partner secretion pathway transporter BED34_02175 IPR035251 ShlB, POTRA domain BED34_02175 IPR034746 POTRA domain BED34_02175 IPR013686 Polypeptide-transport-associated, ShlB-type BED34_02180 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 BED34_02180 IPR004710 Bile acid:sodium symporter BED34_02180 IPR038770 Sodium/solute symporter superfamily BED34_02185 IPR041745 Lysine-sensitive aspartokinase 3, N-terminal catalytic domain BED34_02185 IPR002912 ACT domain BED34_02185 IPR001048 Aspartate/glutamate/uridylate kinase BED34_02185 IPR005260 Aspartate kinase, monofunctional class BED34_02185 IPR036393 Acetylglutamate kinase-like superfamily BED34_02185 IPR018042 Aspartate kinase, conserved site BED34_02185 IPR001341 Aspartate kinase BED34_02190 IPR035482 Phosphoglucose isomerase, SIS domain 2 BED34_02190 IPR018189 Phosphoglucose isomerase, conserved site BED34_02190 IPR023096 Phosphoglucose isomerase, C-terminal BED34_02190 IPR035476 Phosphoglucose isomerase, SIS domain 1 BED34_02190 IPR001672 Phosphoglucose isomerase (PGI) BED34_02195 IPR009315 Phosphate-starvation-induced PsiE BED34_02195 IPR020948 Phosphate-starvation-induced PsiE-like BED34_02200 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED34_02200 IPR003346 Transposase, IS116/IS110/IS902 BED34_02205 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED34_02205 IPR035906 MetI-like superfamily BED34_02215 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein BED34_02215 IPR006059 Bacterial extracellular solute-binding protein BED34_02215 IPR006061 Solute-binding family 1, conserved site BED34_02220 IPR040582 MalK, OB fold domain BED34_02220 IPR015855 ABC transporter, maltose/maltodextrin import, MalK BED34_02220 IPR017871 ABC transporter, conserved site BED34_02220 IPR003593 AAA+ ATPase domain BED34_02220 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_02220 IPR008995 Molybdate/tungstate binding, C-terminal BED34_02220 IPR003439 ABC transporter-like BED34_02225 IPR023738 Maltoporin BED34_02225 IPR036998 Porin, LamB-type superfamily BED34_02225 IPR003192 Porin, LamB-type BED34_02230 IPR010794 Maltose operon periplasmic BED34_02235 IPR011009 Protein kinase-like domain superfamily BED34_02240 IPR007440 Chorismate--pyruvate lyase BED34_02240 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily BED34_02245 IPR030470 UbiA prenyltransferase conserved site BED34_02245 IPR000537 UbiA prenyltransferase family BED34_02245 IPR039653 Prenyltransferase BED34_02245 IPR006370 4-hydroxybenzoate polyprenyltransferase-like BED34_02250 IPR002123 Phospholipid/glycerol acyltransferase BED34_02250 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase BED34_02250 IPR041728 GPAT/DHAPAT, acyltransferase domain BED34_02250 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB BED34_02255 IPR033718 Diacylglycerol kinase, prokaryotic BED34_02255 IPR036945 Diacylglycerol kinase (DAGK) superfamily BED34_02255 IPR000829 DAGK family BED34_02260 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_02260 IPR006200 Transcription regulator LexA BED34_02260 IPR036286 LexA/Signal peptidase-like superfamily BED34_02260 IPR039418 LexA-like BED34_02260 IPR006199 LexA repressor, DNA-binding domain BED34_02260 IPR036390 Winged helix DNA-binding domain superfamily BED34_02260 IPR006197 Peptidase S24, LexA-like BED34_02260 IPR015927 Peptidase S24/S26A/S26B/S26C BED34_02265 IPR036629 YjbJ superfamily BED34_02265 IPR026042 Stress response protein YjbJ BED34_02265 IPR008462 CsbD-like domain BED34_02270 IPR002481 Ferric-uptake regulator BED34_02270 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_02270 IPR036390 Winged helix DNA-binding domain superfamily BED34_02275 IPR002656 Acyltransferase 3 BED34_02275 IPR036514 SGNH hydrolase superfamily BED34_02280 IPR013785 Aldolase-type TIM barrel BED34_02280 IPR018517 tRNA-dihydrouridine synthase, conserved site BED34_02280 IPR035587 DUS-like, FMN-binding domain BED34_02280 IPR004653 tRNA-dihydrouridine(20/20a) synthase BED34_02280 IPR001269 tRNA-dihydrouridine synthase BED34_02285 IPR014318 Phage shock protein, PspG BED34_02295 IPR013149 Alcohol dehydrogenase, C-terminal BED34_02295 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site BED34_02295 IPR020843 Polyketide synthase, enoylreductase domain BED34_02295 IPR036291 NAD(P)-binding domain superfamily BED34_02295 IPR011032 GroES-like superfamily BED34_02295 IPR013154 Alcohol dehydrogenase, N-terminal BED34_02300 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal BED34_02300 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_02300 IPR007693 DNA helicase, DnaB-like, N-terminal BED34_02300 IPR007694 DNA helicase, DnaB-like, C-terminal BED34_02300 IPR003593 AAA+ ATPase domain BED34_02300 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily BED34_02300 IPR007692 DNA helicase, DnaB type BED34_02310 IPR000796 Aspartate/other aminotransferase BED34_02310 IPR004839 Aminotransferase, class I/classII BED34_02310 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED34_02310 IPR015424 Pyridoxal phosphate-dependent transferase BED34_02310 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site BED34_02310 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED34_02315 IPR007351 Uncharacterised protein YjbR BED34_02315 IPR038056 YjbR-like superfamily BED34_02320 IPR041102 UvrA, interaction domain BED34_02320 IPR017871 ABC transporter, conserved site BED34_02320 IPR041552 UvrA DNA-binding domain BED34_02320 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_02320 IPR004602 UvrABC system subunit A BED34_02320 IPR003439 ABC transporter-like BED34_02325 IPR011344 Single-stranded DNA-binding protein BED34_02325 IPR000424 Primosome PriB/single-strand DNA-binding BED34_02325 IPR012340 Nucleic acid-binding, OB-fold BED34_02330 IPR012893 HipA-like, C-terminal BED34_02330 IPR017508 HipA, N-terminal subdomain 1 BED34_02345 IPR006043 Xanthine/uracil/vitamin C permease BED34_02350 IPR018422 Cation/H+ exchanger, CPA1 family BED34_02350 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria BED34_02350 IPR038770 Sodium/solute symporter superfamily BED34_02350 IPR006153 Cation/H+ exchanger BED34_02355 IPR036390 Winged helix DNA-binding domain superfamily BED34_02355 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_02355 IPR000847 Transcription regulator HTH, LysR BED34_02355 IPR005119 LysR, substrate-binding BED34_02360 IPR023760 Holin-like protein CidA BED34_02360 IPR005538 LrgA/CidA family BED34_02370 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type BED34_02370 IPR017871 ABC transporter, conserved site BED34_02370 IPR003593 AAA+ ATPase domain BED34_02370 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_02370 IPR003439 ABC transporter-like BED34_02375 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain BED34_02375 IPR035906 MetI-like superfamily BED34_02375 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED34_02380 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain BED34_02380 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED34_02380 IPR035906 MetI-like superfamily BED34_02385 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BED34_02385 IPR018313 Solute-binding protein family 3, conserved site BED34_02395 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED34_02395 IPR003346 Transposase, IS116/IS110/IS902 BED34_02400 IPR004960 Bacterial lipid A biosynthesis acyltransferase BED34_02400 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase BED34_02400 IPR030857 Lipid A biosynthesis palmitoleoyltransferase, LpxP BED34_02405 IPR030676 Citrate carrier CitT-related BED34_02405 IPR001898 Solute carrier family 13 BED34_02410 IPR011129 Cold shock domain BED34_02410 IPR002059 Cold-shock protein, DNA-binding BED34_02410 IPR012156 Cold shock, CspA BED34_02410 IPR012340 Nucleic acid-binding, OB-fold BED34_02410 IPR019844 Cold-shock (CSD) domain BED34_02415 IPR012156 Cold shock, CspA BED34_02415 IPR012340 Nucleic acid-binding, OB-fold BED34_02415 IPR011129 Cold shock domain BED34_02415 IPR019844 Cold-shock (CSD) domain BED34_02415 IPR002059 Cold-shock protein, DNA-binding BED34_02420 IPR008816 Glycine zipper 2TM domain BED34_02430 IPR009057 Homeobox-like domain superfamily BED34_02430 IPR005412 DNA-binding protein Fis BED34_02430 IPR002197 DNA binding HTH domain, Fis-type BED34_02435 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 BED34_02435 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal BED34_02435 IPR032887 tRNA-dihydrouridine synthase B BED34_02435 IPR035587 DUS-like, FMN-binding domain BED34_02435 IPR001269 tRNA-dihydrouridine synthase BED34_02435 IPR013785 Aldolase-type TIM barrel BED34_02435 IPR018517 tRNA-dihydrouridine synthase, conserved site BED34_02440 IPR004498 Ribosomal protein L11 methyltransferase BED34_02440 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED34_02445 IPR011849 Sodium/pantothenate symporter BED34_02445 IPR018212 Sodium/solute symporter, conserved site BED34_02445 IPR038377 Sodium/glucose symporter superfamily BED34_02445 IPR001734 Sodium/solute symporter BED34_02450 IPR010398 Protein of unknown function DUF997 BED34_02455 IPR005481 Biotin carboxylase-like, N-terminal domain BED34_02455 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain BED34_02455 IPR011764 Biotin carboxylation domain BED34_02455 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase BED34_02455 IPR011761 ATP-grasp fold BED34_02455 IPR011054 Rudiment single hybrid motif BED34_02455 IPR016185 Pre-ATP-grasp domain superfamily BED34_02455 IPR013815 ATP-grasp fold, subdomain 1 BED34_02455 IPR005482 Biotin carboxylase, C-terminal BED34_02460 IPR001882 Biotin-binding site BED34_02460 IPR011053 Single hybrid motif BED34_02460 IPR000089 Biotin/lipoyl attachment BED34_02460 IPR001249 Acetyl-CoA biotin carboxyl carrier BED34_02465 IPR036441 Dehydroquinase, class II superfamily BED34_02465 IPR018509 Dehydroquinase, class II, conserved site BED34_02465 IPR001874 Dehydroquinase, class II BED34_02470 IPR013130 Ferric reductase transmembrane component-like domain BED34_02470 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ BED34_02475 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily BED34_02475 IPR000572 Oxidoreductase, molybdopterin-binding domain BED34_02475 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP BED34_02480 IPR013149 Alcohol dehydrogenase, C-terminal BED34_02480 IPR020843 Polyketide synthase, enoylreductase domain BED34_02480 IPR036291 NAD(P)-binding domain superfamily BED34_02480 IPR014188 Acrylyl-CoA reductase AcuI BED34_02480 IPR013154 Alcohol dehydrogenase, N-terminal BED34_02480 IPR011032 GroES-like superfamily BED34_02485 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 BED34_02485 IPR000160 GGDEF domain BED34_02485 IPR035919 EAL domain superfamily BED34_02485 IPR001633 EAL domain BED34_02485 IPR029787 Nucleotide cyclase BED34_02490 IPR004753 Cell shape determining protein MreB BED34_02495 IPR007221 Rod shape-determining protein MreC BED34_02495 IPR042177 Cell/Rod shape-determining protein MreC, domain 1 BED34_02495 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 BED34_02500 IPR007227 Cell shape-determining protein MreD BED34_02500 IPR026034 Cell shape-determining protein MreD, proteobacterial type BED34_02505 IPR029001 Inosine triphosphate pyrophosphatase-like BED34_02505 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein BED34_02510 IPR004659 Ribonuclease E/G BED34_02510 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G BED34_02510 IPR012340 Nucleic acid-binding, OB-fold BED34_02510 IPR003029 S1 domain BED34_02510 IPR022967 RNA-binding domain, S1 BED34_02515 IPR025263 Domain of unknown function DUF3971 BED34_02515 IPR011836 Conserved hypothetical protein CHP02099 BED34_02515 IPR032712 AsmA-like, C-terminal BED34_02520 IPR003010 Carbon-nitrogen hydrolase BED34_02520 IPR036526 Carbon-nitrogen hydrolase superfamily BED34_02520 IPR001110 Uncharacterised protein family UPF0012, conserved site BED34_02525 IPR036059 Metalloprotease TldD/PmbA superfamily BED34_02525 IPR035068 Metalloprotease TldD/PmbA, N-terminal BED34_02525 IPR002510 Metalloprotease TldD/PmbA BED34_02525 IPR025502 TldD BED34_02560 IPR022045 Insecticide toxin TcdB middle/N-terminal BED34_02560 IPR003284 Salmonella virulence plasmid 65kDa B protein BED34_02560 IPR022044 Insecticide toxin TcdB middle/C-terminal BED34_02565 IPR041079 Neuraminidase-like domain BED34_02565 IPR040840 Tc toxin complex TcA, C-terminal TcB-binding domain BED34_02580 IPR005119 LysR, substrate-binding BED34_02580 IPR000847 Transcription regulator HTH, LysR BED34_02580 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_02580 IPR036390 Winged helix DNA-binding domain superfamily BED34_02585 IPR012451 Protein of unknown function DUF1656 BED34_02590 IPR039562 Membrane fusion protein, biotin-lipoyl like domain BED34_02590 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA BED34_02590 IPR006143 RND efflux pump, membrane fusion protein BED34_02595 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein BED34_02595 IPR023706 Para-hydroxybenzoic acid efflux pump, subunit AaeB BED34_02600 IPR016162 Aldehyde dehydrogenase, N-terminal BED34_02600 IPR016161 Aldehyde/histidinol dehydrogenase BED34_02600 IPR016163 Aldehyde dehydrogenase, C-terminal BED34_02600 IPR010102 Succinate semialdehyde dehydrogenase BED34_02600 IPR016160 Aldehyde dehydrogenase, cysteine active site BED34_02600 IPR029510 Aldehyde dehydrogenase, glutamic acid active site BED34_02600 IPR015590 Aldehyde dehydrogenase domain BED34_02610 IPR035905 Barstar-like superfamily BED34_02610 IPR000468 Barstar (barnase inhibitor) BED34_02615 IPR023153 PSPTO4464-like domain superfamily BED34_02615 IPR006839 Ribosome-associated, YjgA BED34_02620 IPR013762 Integrase-like, catalytic domain superfamily BED34_02620 IPR004107 Integrase, SAM-like, N-terminal BED34_02620 IPR023009 Tyrosine recombinase XerC/XerD BED34_02620 IPR011010 DNA breaking-rejoining enzyme, catalytic core BED34_02620 IPR002104 Integrase, catalytic domain BED34_02620 IPR010998 Integrase/recombinase, N-terminal BED34_02650 IPR012263 Adenine modification methylase, M.EcoRV-type BED34_02650 IPR023095 Adenine-specific methyltransferase, domain 2 BED34_02650 IPR002052 DNA methylase, N-6 adenine-specific, conserved site BED34_02650 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED34_02650 IPR012327 D12 class N6 adenine-specific DNA methyltransferase BED34_02660 IPR008766 Replication gene A protein BED34_02795 IPR002510 Metalloprotease TldD/PmbA BED34_02795 IPR036059 Metalloprotease TldD/PmbA superfamily BED34_02795 IPR035068 Metalloprotease TldD/PmbA, N-terminal BED34_02800 IPR003346 Transposase, IS116/IS110/IS902 BED34_02800 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED34_02805 IPR010980 Cytochrome c/b562 BED34_02805 IPR009155 Cytochrome b562 BED34_02810 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain BED34_02810 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily BED34_02810 IPR023459 Transcription elongation factor GreA/GreB family BED34_02810 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal BED34_02810 IPR028625 Regulator of nucleoside diphosphate kinase BED34_02840 IPR032466 Metal-dependent hydrolase BED34_02840 IPR011059 Metal-dependent hydrolase, composite domain superfamily BED34_02840 IPR020043 Deacetylase Atu3266-like BED34_02840 IPR006680 Amidohydrolase-related BED34_02845 IPR018319 L-seryl-tRNA selenium transferase-like BED34_02845 IPR006337 D-glucosaminate-6-phosphate ammonia lyase DgaE-like BED34_02845 IPR015424 Pyridoxal phosphate-dependent transferase BED34_02845 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED34_02850 IPR013785 Aldolase-type TIM barrel BED34_02850 IPR010763 2-dehydro-3-deoxy-phosphogluconate aldolase BED34_02860 IPR013196 Helix-turn-helix, type 11 BED34_02860 IPR016152 Phosphotransferase/anion transporter BED34_02860 IPR002178 PTS EIIA type-2 domain BED34_02860 IPR036095 PTS system IIB component-like superfamily BED34_02860 IPR013011 Phosphotransferase system, EIIB component, type 2 BED34_02860 IPR036634 PRD domain superfamily BED34_02860 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_02860 IPR036390 Winged helix DNA-binding domain superfamily BED34_02860 IPR011608 PRD domain BED34_02860 IPR007737 Mga helix-turn-helix domain BED34_02865 IPR001387 Cro/C1-type helix-turn-helix domain BED34_02865 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BED34_02865 IPR013430 Toxin-antitoxin system, antidote protein, HigA BED34_02870 IPR007711 Toxin HigB-1 BED34_02870 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily BED34_02880 IPR028082 Periplasmic binding protein-like I BED34_02880 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BED34_02880 IPR000843 LacI-type HTH domain BED34_02880 IPR012771 Trehalose operon repressor BED34_02890 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) BED34_02890 IPR013780 Glycosyl hydrolase, all-beta BED34_02890 IPR017853 Glycoside hydrolase superfamily BED34_02890 IPR012769 Trehalose-6-phosphate hydrolase BED34_02890 IPR006047 Glycosyl hydrolase, family 13, catalytic domain BED34_02905 IPR025841 Circularly permuted ATP-grasp type 2 BED34_02905 IPR007296 Domain of unknown function DUF403 BED34_02910 IPR025841 Circularly permuted ATP-grasp type 2 BED34_02910 IPR016450 Uncharacterised conserved protein UCP005522 BED34_02915 IPR006175 YjgF/YER057c/UK114 family BED34_02915 IPR006056 RidA family BED34_02915 IPR035959 RutC-like superfamily BED34_02915 IPR019897 RidA, conserved site BED34_02920 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily BED34_02920 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily BED34_02920 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal BED34_02920 IPR002801 Aspartate transcarbamylase regulatory subunit BED34_02920 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal BED34_02925 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding BED34_02925 IPR002082 Aspartate carbamoyltransferase BED34_02925 IPR006130 Aspartate/ornithine carbamoyltransferase BED34_02925 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily BED34_02925 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain BED34_02930 IPR002114 Phosphotransferase system, HPr serine phosphorylation site BED34_02930 IPR000032 Phosphocarrier protein HPr-like BED34_02930 IPR035895 HPr-like superfamily BED34_02930 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site BED34_02935 IPR005337 RapZ-like family BED34_02935 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_02940 IPR016152 Phosphotransferase/anion transporter BED34_02940 IPR002178 PTS EIIA type-2 domain BED34_02940 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN BED34_02945 IPR036567 Ribosome hibernation promotion factor-like BED34_02945 IPR003489 Ribosome hibernation promoting factor/RaiA BED34_02950 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily BED34_02950 IPR000394 RNA polymerase sigma factor 54 BED34_02950 IPR007046 RNA polymerase sigma factor 54, core-binding domain BED34_02950 IPR007634 RNA polymerase sigma factor 54, DNA-binding BED34_02955 IPR017871 ABC transporter, conserved site BED34_02955 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal BED34_02955 IPR030921 LPS export ABC transporter, ATP-binding protein LptB BED34_02955 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_02955 IPR003593 AAA+ ATPase domain BED34_02955 IPR003439 ABC transporter-like BED34_02960 IPR005653 Organic solvent tolerance-like, N-terminal BED34_02960 IPR014340 Lipopolysaccharide export system protein LptA BED34_02965 IPR026265 Lipopolysaccharide export system protein LptC BED34_02965 IPR010664 Lipopolysaccharide assembly, LptC-related BED34_02970 IPR023214 HAD superfamily BED34_02970 IPR010023 KdsC family BED34_02970 IPR036412 HAD-like superfamily BED34_02975 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type BED34_02975 IPR000644 CBS domain BED34_02975 IPR001347 Sugar isomerase (SIS) BED34_02975 IPR035474 KpsF-like, SIS domain BED34_02985 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_02985 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl BED34_02985 IPR017871 ABC transporter, conserved site BED34_02985 IPR003439 ABC transporter-like BED34_02985 IPR003593 AAA+ ATPase domain BED34_02990 IPR030802 ABC transporter permease MalE BED34_02990 IPR003453 ABC transport permease subunit MlaE, Proteobacteria BED34_02995 IPR003399 Mce/MlaD BED34_02995 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD BED34_03000 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC BED34_03000 IPR042245 Tgt2/MlaC superfamily BED34_03005 IPR036513 STAS domain superfamily BED34_03005 IPR002645 STAS domain BED34_03010 IPR002634 BolA protein BED34_03010 IPR036065 BolA-like superfamily BED34_03015 IPR001986 Enolpyruvate transferase domain BED34_03015 IPR036968 Enolpyruvate transferase domain superfamily BED34_03015 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta BED34_03015 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase BED34_03020 IPR036034 PDZ superfamily BED34_03020 IPR011783 Peptidase S1C, DegS BED34_03020 IPR001940 Peptidase S1C BED34_03020 IPR001478 PDZ domain BED34_03020 IPR009003 Peptidase S1, PA clan BED34_03025 IPR011782 Peptidase S1C, Do BED34_03025 IPR001478 PDZ domain BED34_03025 IPR036034 PDZ superfamily BED34_03025 IPR009003 Peptidase S1, PA clan BED34_03025 IPR001940 Peptidase S1C BED34_03030 IPR009386 Protein of unknown function DUF1043 BED34_03035 IPR030870 Cell division protein ZapE BED34_03035 IPR005654 ATPase, AFG1-like BED34_03035 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_03040 IPR005822 Ribosomal protein L13 BED34_03040 IPR005823 Ribosomal protein L13, bacterial-type BED34_03040 IPR023563 Ribosomal protein L13, conserved site BED34_03040 IPR036899 Ribosomal protein L13 superfamily BED34_03045 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BED34_03045 IPR000754 Ribosomal protein S9 BED34_03045 IPR023035 Ribosomal protein S9, bacterial/plastid BED34_03045 IPR020574 Ribosomal protein S9, conserved site BED34_03045 IPR020568 Ribosomal protein S5 domain 2-type fold BED34_03050 IPR004046 Glutathione S-transferase, C-terminal BED34_03050 IPR034341 Stringent starvation protein A, N-terminal BED34_03050 IPR040079 Glutathione Transferase family BED34_03050 IPR004045 Glutathione S-transferase, N-terminal BED34_03050 IPR010987 Glutathione S-transferase, C-terminal-like BED34_03050 IPR036249 Thioredoxin-like superfamily BED34_03050 IPR036282 Glutathione S-transferase, C-terminal domain superfamily BED34_03055 IPR036760 SspB-like superfamily BED34_03055 IPR007481 Stringent starvation protein B BED34_03070 IPR036188 FAD/NAD(P)-binding domain superfamily BED34_03070 IPR023753 FAD/NAD(P)-binding domain BED34_03070 IPR028261 Dihydroprymidine dehydrogenase domain II BED34_03070 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 BED34_03070 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BED34_03070 IPR009051 Alpha-helical ferredoxin BED34_03075 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily BED34_03075 IPR002932 Glutamate synthase domain BED34_03075 IPR029055 Nucleophile aminohydrolases, N-terminal BED34_03075 IPR013785 Aldolase-type TIM barrel BED34_03075 IPR017932 Glutamine amidotransferase type 2 domain BED34_03075 IPR002489 Glutamate synthase, alpha subunit, C-terminal BED34_03075 IPR006982 Glutamate synthase, central-N BED34_03080 IPR023404 Radical SAM, alpha/beta horseshoe BED34_03080 IPR005911 Protein YhcC-like BED34_03080 IPR006638 Elp3/MiaB/NifB BED34_03080 IPR032432 Radical SAM, C-terminal extension BED34_03080 IPR007197 Radical SAM BED34_03080 IPR039661 ELP3/YhcC BED34_03085 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB BED34_03085 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BED34_03085 IPR005467 Histidine kinase domain BED34_03085 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BED34_03085 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BED34_03085 IPR040642 Histidine kinase receptor ArcB, transmembrane domain BED34_03085 IPR011006 CheY-like superfamily BED34_03085 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily BED34_03085 IPR000014 PAS domain BED34_03085 IPR000700 PAS-associated, C-terminal BED34_03085 IPR036641 HPT domain superfamily BED34_03085 IPR003594 Histidine kinase/HSP90-like ATPase BED34_03085 IPR013767 PAS fold BED34_03085 IPR001789 Signal transduction response regulator, receiver domain BED34_03085 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BED34_03085 IPR035965 PAS domain superfamily BED34_03085 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain BED34_03090 IPR026041 Glyoxalase ElbB BED34_03090 IPR029062 Class I glutamine amidotransferase-like BED34_03095 IPR036950 Penicillin binding protein transglycosylase domain BED34_03095 IPR011812 Biosynthetic peptidoglycan transglycosylase BED34_03095 IPR023346 Lysozyme-like domain superfamily BED34_03095 IPR001264 Glycosyl transferase, family 51 BED34_03100 IPR007055 BON domain BED34_03100 IPR014004 Transport-associated and nodulation domain, bacteria BED34_03105 IPR035461 GmhA/DiaA BED34_03105 IPR023070 DnaA initiator-associating protein BED34_03105 IPR001347 Sugar isomerase (SIS) BED34_03110 IPR011335 Restriction endonuclease type II-like BED34_03110 IPR011856 tRNA endonuclease-like domain superfamily BED34_03110 IPR003509 Uncharacterised protein family UPF0102 BED34_03115 IPR011990 Tetratricopeptide-like helical domain superfamily BED34_03115 IPR028082 Periplasmic binding protein-like I BED34_03115 IPR007443 Penicillin-binding protein activator LpoA BED34_03120 IPR014777 Tetrapyrrole methylase, subdomain 1 BED34_03120 IPR018063 SAM-dependent methyltransferase RsmI, conserved site BED34_03120 IPR000878 Tetrapyrrole methylase BED34_03120 IPR014776 Tetrapyrrole methylase, subdomain 2 BED34_03120 IPR008189 rRNA small subunit methyltransferase I BED34_03120 IPR035996 Tetrapyrrole methylase superfamily BED34_03140 IPR006118 Recombinase, conserved site BED34_03140 IPR006119 Resolvase, N-terminal catalytic domain BED34_03140 IPR006120 Resolvase, HTH domain BED34_03140 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily BED34_03140 IPR009057 Homeobox-like domain superfamily BED34_03150 IPR001525 C-5 cytosine methyltransferase BED34_03150 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED34_03150 IPR018117 DNA methylase, C-5 cytosine-specific, active site BED34_03160 IPR001387 Cro/C1-type helix-turn-helix domain BED34_03160 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BED34_03175 IPR013783 Immunoglobulin-like fold BED34_03175 IPR016147 Pili assembly chaperone, N-terminal BED34_03175 IPR018046 Pili assembly chaperone, conserved site BED34_03175 IPR016148 Pili assembly chaperone, C-terminal BED34_03175 IPR001829 Pili assembly chaperone, bacterial BED34_03175 IPR036316 Pili assembly chaperone, C-terminal domain superfamily BED34_03175 IPR008962 PapD-like superfamily BED34_03180 IPR025949 PapC-like, C-terminal domain BED34_03180 IPR000015 Outer membrane usher protein BED34_03180 IPR018030 Fimbrial membrane usher, conserved site BED34_03180 IPR037224 PapC, N-terminal domain superfamily BED34_03180 IPR025885 PapC, N-terminal domain BED34_03180 IPR042186 Outer membrane usher protein FimD, plug domain BED34_03190 IPR036390 Winged helix DNA-binding domain superfamily BED34_03190 IPR000847 Transcription regulator HTH, LysR BED34_03190 IPR005119 LysR, substrate-binding BED34_03190 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_03195 IPR023210 NADP-dependent oxidoreductase domain BED34_03195 IPR020471 Aldo/keto reductase BED34_03195 IPR036812 NADP-dependent oxidoreductase domain superfamily BED34_03200 IPR036291 NAD(P)-binding domain superfamily BED34_03200 IPR020843 Polyketide synthase, enoylreductase domain BED34_03200 IPR011032 GroES-like superfamily BED34_03200 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site BED34_03200 IPR013149 Alcohol dehydrogenase, C-terminal BED34_03200 IPR013154 Alcohol dehydrogenase, N-terminal BED34_03205 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain BED34_03205 IPR012093 Pirin BED34_03205 IPR014710 RmlC-like jelly roll fold BED34_03205 IPR011051 RmlC-like cupin domain superfamily BED34_03205 IPR003829 Pirin, N-terminal domain BED34_03210 IPR005119 LysR, substrate-binding BED34_03210 IPR000847 Transcription regulator HTH, LysR BED34_03210 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_03210 IPR036390 Winged helix DNA-binding domain superfamily BED34_03215 IPR004045 Glutathione S-transferase, N-terminal BED34_03215 IPR040079 Glutathione Transferase family BED34_03215 IPR036249 Thioredoxin-like superfamily BED34_03215 IPR036282 Glutathione S-transferase, C-terminal domain superfamily BED34_03215 IPR010987 Glutathione S-transferase, C-terminal-like BED34_03215 IPR016639 Glutathione S-transferase Omega/GSH BED34_03220 IPR032808 DoxX family BED34_03225 IPR025612 YqjK-like protein BED34_03230 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III BED34_03235 IPR010279 Inner membrane protein YqjD/ElaB BED34_03245 IPR026574 Modulator protein MzrA BED34_03245 IPR027398 SecD export protein N-terminal TM domain BED34_03250 IPR032816 SNARE associated Golgi protein BED34_03250 IPR032818 DedA family BED34_03260 IPR011711 GntR, C-terminal BED34_03260 IPR036390 Winged helix DNA-binding domain superfamily BED34_03260 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_03260 IPR000524 Transcription regulator HTH, GntR BED34_03260 IPR008920 Transcription regulator FadR/GntR, C-terminal BED34_03265 IPR011701 Major facilitator superfamily BED34_03265 IPR020846 Major facilitator superfamily domain BED34_03265 IPR036259 MFS transporter superfamily BED34_03270 IPR032466 Metal-dependent hydrolase BED34_03270 IPR003766 Uronate isomerase BED34_03275 IPR036291 NAD(P)-binding domain superfamily BED34_03275 IPR013328 6-phosphogluconate dehydrogenase, domain 2 BED34_03275 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BED34_03275 IPR013131 Mannitol dehydrogenase, N-terminal BED34_03275 IPR023668 Altronate oxidoreductase BED34_03275 IPR013118 Mannitol dehydrogenase, C-terminal BED34_03280 IPR007392 D-galactarate/Altronate dehydratase, C-terminal BED34_03280 IPR013974 SAF domain BED34_03285 IPR026267 Inner membrane protein YgjV BED34_03285 IPR019629 Uncharacterised protein family HI1736/YgjV BED34_03290 IPR023025 Serine/threonine transporter SstT BED34_03290 IPR036458 Sodium:dicarboxylate symporter superfamily BED34_03290 IPR001991 Sodium:dicarboxylate symporter BED34_03295 IPR005496 Integral membrane protein TerC BED34_03295 IPR022369 Integral membrane protein TerC, riboswitch-linked BED34_03305 IPR000683 Oxidoreductase, N-terminal BED34_03305 IPR036291 NAD(P)-binding domain superfamily BED34_03310 IPR002725 Protein of unknown function DUF45 BED34_03325 IPR036709 Autotransporter beta-domain superfamily BED34_03325 IPR005546 Autotransporter beta-domain BED34_03325 IPR006315 Outer membrane autotransporter barrel BED34_03325 IPR011050 Pectin lyase fold/virulence factor BED34_03330 IPR002052 DNA methylase, N-6 adenine-specific, conserved site BED34_03330 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED34_03330 IPR007848 Methyltransferase small domain BED34_03330 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD BED34_03335 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED34_03335 IPR003346 Transposase, IS116/IS110/IS902 BED34_03340 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal BED34_03340 IPR013785 Aldolase-type TIM barrel BED34_03340 IPR036188 FAD/NAD(P)-binding domain superfamily BED34_03340 IPR023753 FAD/NAD(P)-binding domain BED34_03345 IPR000620 EamA domain BED34_03350 IPR005325 Protein of unknown function DUF308, membrane BED34_03360 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED34_03360 IPR010107 Glutamate decarboxylase BED34_03360 IPR002129 Pyridoxal phosphate-dependent decarboxylase BED34_03360 IPR021115 Pyridoxal-phosphate binding site BED34_03360 IPR015424 Pyridoxal phosphate-dependent transferase BED34_03365 IPR002293 Amino acid/polyamine transporter I BED34_03370 IPR015868 Glutaminase BED34_03370 IPR012338 Beta-lactamase/transpeptidase-like BED34_03380 IPR001207 Transposase, mutator type BED34_03385 IPR036878 Glucose permease domain IIB BED34_03385 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site BED34_03385 IPR003352 Phosphotransferase system, EIIC BED34_03385 IPR013013 Phosphotransferase system, EIIC component, type 1 BED34_03385 IPR001996 Phosphotransferase system, IIB component, type 1 BED34_03390 IPR040190 N-acetylmuramic acid 6-phosphate etherase/glucokinase regulatory protein BED34_03390 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ BED34_03390 IPR001347 Sugar isomerase (SIS) BED34_03390 IPR005486 Glucokinase regulatory protein, conserved site BED34_03390 IPR000408 Regulator of chromosome condensation, RCC1 BED34_03395 IPR022821 Transcription regulator HTH, MurR BED34_03395 IPR035472 RpiR-like, SIS domain BED34_03395 IPR009057 Homeobox-like domain superfamily BED34_03395 IPR001347 Sugar isomerase (SIS) BED34_03395 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_03395 IPR000281 Helix-turn-helix protein RpiR BED34_03400 IPR019800 Glycoside hydrolase, family 3, active site BED34_03400 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily BED34_03400 IPR002772 Glycoside hydrolase family 3 C-terminal domain BED34_03400 IPR001764 Glycoside hydrolase, family 3, N-terminal BED34_03400 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily BED34_03400 IPR017853 Glycoside hydrolase superfamily BED34_03410 IPR008302 Uncharacterised conserved protein UCP016719 BED34_03420 IPR003346 Transposase, IS116/IS110/IS902 BED34_03420 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED34_03425 IPR009042 RNA polymerase sigma-70 region 1.2 BED34_03425 IPR007631 RNA polymerase sigma factor 70, non-essential domain BED34_03425 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_03425 IPR007630 RNA polymerase sigma-70 region 4 BED34_03425 IPR007624 RNA polymerase sigma-70 region 3 BED34_03425 IPR000943 RNA polymerase sigma-70 BED34_03425 IPR013325 RNA polymerase sigma factor, region 2 BED34_03425 IPR028630 RNA polymerase sigma factor RpoD BED34_03425 IPR042189 Sigma-70 factor, region 1.1 superfamily BED34_03425 IPR007127 RNA polymerase sigma factor 70, region 1.1 BED34_03425 IPR007627 RNA polymerase sigma-70 region 2 BED34_03425 IPR012760 RNA polymerase sigma factor RpoD, C-terminal BED34_03425 IPR014284 RNA polymerase sigma-70 like domain BED34_03425 IPR013324 RNA polymerase sigma factor, region 3/4-like BED34_03430 IPR002694 Zinc finger, CHC2-type BED34_03430 IPR006171 TOPRIM domain BED34_03430 IPR019475 DNA primase, DnaB-helicase binding domain BED34_03430 IPR030846 DNA primase DnaG, bacteria BED34_03430 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily BED34_03430 IPR013264 DNA primase, catalytic core, N-terminal BED34_03430 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal BED34_03430 IPR034151 Bacterial DnaG primase, TOPRIM domain BED34_03430 IPR006295 DNA primase, DnaG BED34_03430 IPR013173 DNA primase DnaG, DnaB-binding domain BED34_03430 IPR036977 DNA Primase, CHC2-type zinc finger BED34_03435 IPR038380 Ribosomal protein S21 superfamily BED34_03435 IPR018278 Ribosomal protein S21, conserved site BED34_03435 IPR001911 Ribosomal protein S21 BED34_03440 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD BED34_03440 IPR017860 Peptidase M22, conserved site BED34_03440 IPR017861 Kae1/TsaD family BED34_03440 IPR000905 Gcp-like domain BED34_03445 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY BED34_03450 IPR006156 Dihydroneopterin aldolase BED34_03450 IPR006157 Dihydroneopterin aldolase/epimerase domain BED34_03455 IPR003824 Undecaprenyl-diphosphatase UppP BED34_03460 IPR002646 Poly A polymerase, head domain BED34_03460 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain BED34_03460 IPR006674 HD domain BED34_03460 IPR003607 HD/PDEase domain BED34_03460 IPR012006 tRNA nucleotidyltransferase, proteobacteria BED34_03465 IPR016476 SH3 domain protein BED34_03465 IPR003646 SH3-like domain, bacterial-type BED34_03470 IPR007899 CHAD domain BED34_03470 IPR033469 CYTH-like domain superfamily BED34_03470 IPR023577 CYTH domain BED34_03470 IPR039013 Inorganic triphosphatase YgiF BED34_03475 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase BED34_03475 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain BED34_03475 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme BED34_03480 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED34_03480 IPR004821 Cytidyltransferase-like domain BED34_03480 IPR011611 Carbohydrate kinase PfkB BED34_03480 IPR011914 RfaE bifunctional protein, domain II BED34_03480 IPR011913 RfaE bifunctional protein, domain I BED34_03480 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site BED34_03480 IPR023030 Bifunctional protein HldE BED34_03480 IPR029056 Ribokinase-like BED34_03485 IPR002293 Amino acid/polyamine transporter I BED34_03490 IPR007475 Ubiquinone biosynthesis accessory factor UbiK BED34_03495 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily BED34_03495 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB BED34_03500 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B BED34_03500 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type BED34_03505 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain BED34_03505 IPR016185 Pre-ATP-grasp domain superfamily BED34_03510 IPR009576 Biofilm formation YgiB BED34_03520 IPR010130 Type I secretion outer membrane protein, TolC BED34_03520 IPR003423 Outer membrane efflux protein BED34_03525 IPR020084 NUDIX hydrolase, conserved site BED34_03525 IPR000086 NUDIX hydrolase domain BED34_03525 IPR004385 Nucleoside diphosphate pyrophosphatase BED34_03525 IPR015797 NUDIX hydrolase-like domain superfamily BED34_03530 IPR009659 Protein of unknown function DUF1249 BED34_03535 IPR029052 Metallo-dependent phosphatase-like BED34_03535 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA BED34_03535 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type BED34_03540 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA BED34_03540 IPR029058 Alpha/Beta hydrolase fold BED34_03545 IPR001241 DNA topoisomerase, type IIA BED34_03545 IPR003594 Histidine kinase/HSP90-like ATPase BED34_03545 IPR006171 TOPRIM domain BED34_03545 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative BED34_03545 IPR018522 DNA topoisomerase, type IIA, conserved site BED34_03545 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 BED34_03545 IPR002288 DNA gyrase B subunit, C-terminal BED34_03545 IPR013760 DNA topoisomerase, type IIA-like domain superfamily BED34_03545 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal BED34_03545 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BED34_03545 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BED34_03545 IPR020568 Ribosomal protein S5 domain 2-type fold BED34_03550 IPR005119 LysR, substrate-binding BED34_03550 IPR000847 Transcription regulator HTH, LysR BED34_03550 IPR036390 Winged helix DNA-binding domain superfamily BED34_03550 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_03555 IPR011008 Dimeric alpha-beta barrel BED34_03555 IPR007138 Antibiotic biosynthesis monooxygenase domain BED34_03560 IPR029039 Flavoprotein-like superfamily BED34_03560 IPR003680 Flavodoxin-like fold BED34_03565 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal BED34_03565 IPR013760 DNA topoisomerase, type IIA-like domain superfamily BED34_03565 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta BED34_03565 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily BED34_03565 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative BED34_03565 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat BED34_03565 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal BED34_03570 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase BED34_03570 IPR002123 Phospholipid/glycerol acyltransferase BED34_03575 IPR011706 Multicopper oxidase, type 2 BED34_03575 IPR008972 Cupredoxin BED34_03575 IPR026589 Cell division protein FtsP BED34_03575 IPR006311 Twin-arginine translocation pathway, signal sequence BED34_03575 IPR011707 Multicopper oxidase, type 3 BED34_03580 IPR006638 Elp3/MiaB/NifB BED34_03580 IPR013704 Uncharacterised protein family UPF0313, N-terminal BED34_03580 IPR024560 Uncharacterised protein family UPF0313, C-terminal BED34_03580 IPR020612 Methylthiotransferase, conserved site BED34_03580 IPR023404 Radical SAM, alpha/beta horseshoe BED34_03580 IPR007197 Radical SAM BED34_03580 IPR022946 Uncharacterised protein family UPF0313 BED34_03585 IPR036812 NADP-dependent oxidoreductase domain superfamily BED34_03585 IPR023210 NADP-dependent oxidoreductase domain BED34_03585 IPR020471 Aldo/keto reductase BED34_03585 IPR018170 Aldo/keto reductase, conserved site BED34_03590 IPR018211 Alcohol dehydrogenase, iron-type, conserved site BED34_03590 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA BED34_03595 IPR009057 Homeobox-like domain superfamily BED34_03595 IPR009594 Transcription regulator HTH, AraC, N-terminal BED34_03595 IPR018060 DNA binding HTH domain, AraC-type BED34_03600 IPR032818 DedA family BED34_03600 IPR032816 SNARE associated Golgi protein BED34_03605 IPR015424 Pyridoxal phosphate-dependent transferase BED34_03605 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED34_03605 IPR006233 Cystathionine beta-lyase, bacterial BED34_03605 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme BED34_03605 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED34_03610 IPR002898 MotA/TolQ/ExbB proton channel BED34_03610 IPR014164 TonB-system energizer ExbB type-1 BED34_03615 IPR014170 TonB system transport protein ExbD type-1 BED34_03615 IPR003400 Biopolymer transport protein ExbD/TolR BED34_03650 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_03650 IPR001482 Type II/IV secretion system protein BED34_03650 IPR022399 Helicase/secretion neighbourhood ATPase BED34_03665 IPR001775 GspD/PilQ family BED34_03665 IPR032789 Pilus formation protein, N-terminal BED34_03665 IPR004846 Type II/III secretion system BED34_03665 IPR014004 Transport-associated and nodulation domain, bacteria BED34_03665 IPR007055 BON domain BED34_03690 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like BED34_03690 IPR005123 Oxoglutarate/iron-dependent dioxygenase BED34_03690 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily BED34_03690 IPR004574 Alkylated DNA repair protein AlkB BED34_03695 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA BED34_03695 IPR001036 Acriflavin resistance protein BED34_03695 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BED34_03700 IPR012337 Ribonuclease H-like superfamily BED34_03705 IPR003738 SOS response associated peptidase (SRAP) BED34_03705 IPR036590 SOS response associated peptidase-like BED34_03720 IPR009057 Homeobox-like domain superfamily BED34_03720 IPR018060 DNA binding HTH domain, AraC-type BED34_03720 IPR018062 HTH domain AraC-type, conserved site BED34_03720 IPR020449 Transcription regulator HTH, AraC- type BED34_03725 IPR009057 Homeobox-like domain superfamily BED34_03725 IPR002514 Transposase IS3/IS911family BED34_03745 IPR025857 MacB-like periplasmic core domain BED34_03745 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_03745 IPR003593 AAA+ ATPase domain BED34_03745 IPR003838 ABC transporter permease protein domain BED34_03745 IPR003439 ABC transporter-like BED34_03745 IPR017871 ABC transporter, conserved site BED34_03745 IPR017911 ABC transporter, macrolide export, ATP-binding domain BED34_03750 IPR020449 Transcription regulator HTH, AraC- type BED34_03750 IPR018062 HTH domain AraC-type, conserved site BED34_03750 IPR018060 DNA binding HTH domain, AraC-type BED34_03750 IPR009057 Homeobox-like domain superfamily BED34_03760 IPR025948 HTH-like domain BED34_03760 IPR001584 Integrase, catalytic core BED34_03760 IPR012337 Ribonuclease H-like superfamily BED34_03760 IPR036397 Ribonuclease H superfamily BED34_03775 IPR021764 Enterochelin esterase, N-terminal BED34_03775 IPR014756 Immunoglobulin E-set BED34_03775 IPR029058 Alpha/Beta hydrolase fold BED34_03775 IPR000801 Putative esterase BED34_03775 IPR013783 Immunoglobulin-like fold BED34_03780 IPR003439 ABC transporter-like BED34_03780 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_03780 IPR003593 AAA+ ATPase domain BED34_03780 IPR017871 ABC transporter, conserved site BED34_03785 IPR037294 ABC transporter, BtuC-like BED34_03785 IPR000522 ABC transporter, permease protein, BtuC-like BED34_03790 IPR000522 ABC transporter, permease protein, BtuC-like BED34_03790 IPR037294 ABC transporter, BtuC-like BED34_03795 IPR002491 ABC transporter periplasmic binding domain BED34_03805 IPR036291 NAD(P)-binding domain superfamily BED34_03805 IPR001509 NAD-dependent epimerase/dehydratase BED34_03810 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding BED34_03810 IPR004090 Chemotaxis methyl-accepting receptor BED34_03810 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BED34_03810 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site BED34_03810 IPR003660 HAMP domain BED34_03810 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily BED34_03820 IPR042196 FHIPEP, domain 4 BED34_03820 IPR042193 FHIPEP, domain 3 BED34_03820 IPR025505 FHIPEP conserved site BED34_03820 IPR042194 FHIPEP, domain 1 BED34_03820 IPR001712 Type III secretion system FHIPEP BED34_03820 IPR006301 Flagellar biosynthesis protein FlhA BED34_03825 IPR029025 Type III secretion system substrate exporter, C-terminal BED34_03825 IPR006135 Type III secretion system substrate exporter BED34_03825 IPR006136 Flagellar biosynthetic protein FlhB BED34_03830 IPR002010 Type III secretion system inner membrane R protein BED34_03830 IPR006303 Flagellar biosynthesis protein FliR BED34_03835 IPR002191 Bacterial export protein family 3 BED34_03835 IPR006305 Flagellar biosynthesis protein FliQ BED34_03840 IPR005837 Flagellar transport protein FliP BED34_03840 IPR005838 Type III secretion system inner membrane P protein BED34_03845 IPR036429 SpoA-like superfamily BED34_03845 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb BED34_03845 IPR012826 Flagellar motor switch FliN BED34_03845 IPR001543 Surface presentation of antigen (SpoA) BED34_03855 IPR001789 Signal transduction response regulator, receiver domain BED34_03855 IPR025944 Sigma-54 interaction domain, conserved site BED34_03855 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BED34_03855 IPR002078 RNA polymerase sigma factor 54 interaction domain BED34_03855 IPR003593 AAA+ ATPase domain BED34_03855 IPR011006 CheY-like superfamily BED34_03855 IPR009057 Homeobox-like domain superfamily BED34_03855 IPR002197 DNA binding HTH domain, Fis-type BED34_03855 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_03855 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BED34_03860 IPR001624 Flagellar hook-basal body complex protein FliE BED34_03880 IPR020005 Flagellar export ATPase FliI, clade 1 BED34_03880 IPR005714 ATPase, type III secretion system, FliI/YscN BED34_03880 IPR003593 AAA+ ATPase domain BED34_03880 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site BED34_03880 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain BED34_03880 IPR040627 T3SS EscN ATPase, C-terminal BED34_03880 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_03880 IPR032463 ATPase, type III secretion system, FliI BED34_03905 IPR019776 Flagellar basal body rod protein, conserved site BED34_03905 IPR001444 Flagellar basal body rod protein, N-terminal BED34_03905 IPR006300 Flagellar basal-body rod protein FlgB BED34_03910 IPR001444 Flagellar basal body rod protein, N-terminal BED34_03910 IPR019776 Flagellar basal body rod protein, conserved site BED34_03910 IPR006299 Flagellar basal-body rod protein FlgC BED34_03910 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BED34_03915 IPR025965 FlgD Ig-like domain BED34_03915 IPR025963 FlgD Tudor-like domain BED34_03915 IPR005648 Flagellar hook capping protein BED34_03920 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like BED34_03920 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BED34_03920 IPR020013 Flagellar hook-basal body protein, FlgE/F/G BED34_03920 IPR019776 Flagellar basal body rod protein, conserved site BED34_03920 IPR011491 Flagellar hook protein FlgE BED34_03920 IPR001444 Flagellar basal body rod protein, N-terminal BED34_03920 IPR037058 Flagellar hook protein FlgE superfamily BED34_03925 IPR001444 Flagellar basal body rod protein, N-terminal BED34_03925 IPR019776 Flagellar basal body rod protein, conserved site BED34_03925 IPR020013 Flagellar hook-basal body protein, FlgE/F/G BED34_03925 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BED34_03925 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like BED34_03930 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like BED34_03930 IPR020013 Flagellar hook-basal body protein, FlgE/F/G BED34_03930 IPR019776 Flagellar basal body rod protein, conserved site BED34_03930 IPR001444 Flagellar basal body rod protein, N-terminal BED34_03930 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BED34_03930 IPR012834 Flagellar basal-body rod FlgG BED34_03935 IPR000527 Flagellar L-ring protein BED34_03940 IPR001782 Flagellar P-ring protein BED34_03975 IPR042187 Flagellin, C-terminal domain, subdomain 2 BED34_03975 IPR001029 Flagellin, D0/D1 domain BED34_03975 IPR001492 Flagellin BED34_03985 IPR036584 Flagellar protein FliS superfamily BED34_03985 IPR003713 Flagellar protein FliS BED34_04005 IPR014284 RNA polymerase sigma-70 like domain BED34_04005 IPR012845 RNA polymerase sigma factor, FliA/WhiG BED34_04005 IPR007630 RNA polymerase sigma-70 region 4 BED34_04005 IPR007627 RNA polymerase sigma-70 region 2 BED34_04005 IPR013325 RNA polymerase sigma factor, region 2 BED34_04005 IPR000943 RNA polymerase sigma-70 BED34_04005 IPR013324 RNA polymerase sigma factor, region 3/4-like BED34_04010 IPR000540 Flagellar motor protein MotA, conserved site BED34_04010 IPR022522 Flagellar motor stator, MotA BED34_04010 IPR002898 MotA/TolQ/ExbB proton channel BED34_04015 IPR025713 Motility protein B, N-terminal domain BED34_04015 IPR036737 OmpA-like domain superfamily BED34_04015 IPR006665 OmpA-like domain BED34_04020 IPR008816 Glycine zipper 2TM domain BED34_04025 IPR027394 Cytochrome-c3 hydrogenase, C-terminal BED34_04025 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit BED34_04025 IPR037148 [NiFe]-hydrogenase, small subunit, C-terminal domain superfamily BED34_04025 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily BED34_04025 IPR001821 [NiFe]-hydrogenase, small subunit BED34_04025 IPR006311 Twin-arginine translocation pathway, signal sequence BED34_04025 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal BED34_04030 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BED34_04030 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BED34_04030 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal BED34_04035 IPR005614 NrfD family BED34_04040 IPR029014 [NiFe]-hydrogenase, large subunit BED34_04040 IPR001501 Nickel-dependent hydrogenase, large subunit BED34_04040 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site BED34_04045 IPR023430 Peptidase HybD-like domain superfamily BED34_04045 IPR000671 Peptidase A31 family BED34_04045 IPR004419 Peptidase A31, hydrogenase expression/formation protein BED34_04050 IPR038530 [NiFe]-hydrogenase assembly, chaperone, HybE superfamily BED34_04050 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE BED34_04055 IPR000688 Hydrogenase maturation factor HypA/HybF BED34_04055 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site BED34_04055 IPR039002 Hydrogenase maturation factor HybF BED34_04060 IPR003495 CobW/HypB/UreG, nucleotide-binding domain BED34_04060 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_04060 IPR004392 Hydrogenase maturation factor HypB BED34_04065 IPR037254 HupF/HypC superfamily BED34_04065 IPR019812 Hydrogenase assembly chaperone, conserved site BED34_04065 IPR001109 Hydrogenase expression/formation protein, HupF/HypC BED34_04070 IPR042244 HypD, domain 1 BED34_04070 IPR002780 Hydrogenase formation HypD protein BED34_04070 IPR042243 HypD, domain 2 BED34_04075 IPR011854 Carbamoyl dehydratase HypE BED34_04075 IPR010918 PurM-like, C-terminal domain BED34_04075 IPR036676 PurM-like, C-terminal domain superfamily BED34_04075 IPR016188 PurM-like, N-terminal domain BED34_04075 IPR036921 PurM-like, N-terminal domain superfamily BED34_04080 IPR006070 YrdC-like domain BED34_04080 IPR041440 HypF, Kae1-like domain BED34_04080 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily BED34_04080 IPR017968 Acylphosphatase, conserved site BED34_04080 IPR036046 Acylphosphatase-like domain superfamily BED34_04080 IPR001792 Acylphosphatase-like domain BED34_04080 IPR011125 Zinc finger, HypF-type BED34_04080 IPR004421 Carbamoyltransferase, HypF-type BED34_04085 IPR003812 Fido domain BED34_04085 IPR036597 Fido-like domain superfamily BED34_04085 IPR040198 Fido domain-containing protein BED34_04085 IPR026287 Protein adenylyltransferase SoFic-like BED34_04085 IPR025758 Fic/DOC N-terminal BED34_04090 IPR000417 Hydroxyethylthiazole kinase BED34_04090 IPR029056 Ribokinase-like BED34_04105 IPR013655 PAS fold-3 BED34_04105 IPR001633 EAL domain BED34_04105 IPR035919 EAL domain superfamily BED34_04105 IPR000160 GGDEF domain BED34_04105 IPR001610 PAC motif BED34_04105 IPR029787 Nucleotide cyclase BED34_04105 IPR000014 PAS domain BED34_04105 IPR013656 PAS fold-4 BED34_04105 IPR000700 PAS-associated, C-terminal BED34_04105 IPR035965 PAS domain superfamily BED34_04110 IPR006143 RND efflux pump, membrane fusion protein BED34_04110 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BED34_04110 IPR022824 Multidrug resistance protein MdtA BED34_04125 IPR020846 Major facilitator superfamily domain BED34_04125 IPR005829 Sugar transporter, conserved site BED34_04125 IPR036259 MFS transporter superfamily BED34_04125 IPR004736 MFS transporter, metabolite:H symporter BED34_04125 IPR015041 Osmosensory transporter coiled coil BED34_04125 IPR005828 Major facilitator, sugar transporter-like BED34_04125 IPR036292 Proline/betaine transporter ProP, C-terminal BED34_04140 IPR003841 Sodium-dependent phosphate transport protein BED34_04140 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein BED34_04145 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain BED34_04145 IPR023186 Inosine/uridine-preferring nucleoside hydrolase BED34_04145 IPR036452 Ribonucleoside hydrolase-like BED34_04145 IPR022976 Non-specific ribonucleoside hydrolase RihC BED34_04150 IPR028082 Periplasmic binding protein-like I BED34_04150 IPR000843 LacI-type HTH domain BED34_04150 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BED34_04155 IPR003346 Transposase, IS116/IS110/IS902 BED34_04155 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED34_04160 IPR004736 MFS transporter, metabolite:H symporter BED34_04160 IPR020846 Major facilitator superfamily domain BED34_04160 IPR011701 Major facilitator superfamily BED34_04160 IPR036259 MFS transporter superfamily BED34_04160 IPR005828 Major facilitator, sugar transporter-like BED34_04170 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_04170 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED34_04170 IPR036390 Winged helix DNA-binding domain superfamily BED34_04170 IPR015424 Pyridoxal phosphate-dependent transferase BED34_04170 IPR004839 Aminotransferase, class I/classII BED34_04170 IPR000524 Transcription regulator HTH, GntR BED34_04190 IPR033870 FatB domain BED34_04190 IPR002491 ABC transporter periplasmic binding domain BED34_04195 IPR037294 ABC transporter, BtuC-like BED34_04195 IPR000522 ABC transporter, permease protein, BtuC-like BED34_04200 IPR037294 ABC transporter, BtuC-like BED34_04200 IPR000522 ABC transporter, permease protein, BtuC-like BED34_04210 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 BED34_04210 IPR000994 Peptidase M24 BED34_04210 IPR036005 Creatinase/aminopeptidase-like BED34_04210 IPR001714 Peptidase M24, methionine aminopeptidase BED34_04230 IPR030196 Multidrug resistance protein MdtN BED34_04230 IPR005694 Efflux pump membrane protein BED34_04230 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BED34_04235 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein BED34_04245 IPR011193 Ornithine/lysine/arginine decarboxylase BED34_04245 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily BED34_04245 IPR000310 Orn/Lys/Arg decarboxylase, major domain BED34_04245 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal BED34_04245 IPR027464 Ornithine decarboxylase, N-terminal BED34_04245 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED34_04245 IPR015424 Pyridoxal phosphate-dependent transferase BED34_04245 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED34_04245 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal BED34_04245 IPR027568 Ornithine decarboxylase SpeF BED34_04245 IPR011006 CheY-like superfamily BED34_04250 IPR027566 Putrescine transporter PotE BED34_04250 IPR002293 Amino acid/polyamine transporter I BED34_04250 IPR004754 Amino acid antiporter BED34_04270 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain BED34_04270 IPR003220 InsA N-terminal domain BED34_04290 IPR011010 DNA breaking-rejoining enzyme, catalytic core BED34_04290 IPR002104 Integrase, catalytic domain BED34_04290 IPR010998 Integrase/recombinase, N-terminal BED34_04290 IPR013762 Integrase-like, catalytic domain superfamily BED34_04305 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily BED34_04305 IPR011006 CheY-like superfamily BED34_04305 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal BED34_04305 IPR011193 Ornithine/lysine/arginine decarboxylase BED34_04305 IPR000310 Orn/Lys/Arg decarboxylase, major domain BED34_04305 IPR027464 Ornithine decarboxylase, N-terminal BED34_04305 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal BED34_04305 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED34_04305 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED34_04305 IPR015424 Pyridoxal phosphate-dependent transferase BED34_04315 IPR024570 Murein transglycosylase-C, N-terminal BED34_04315 IPR023664 Murein transglycosylase-C BED34_04315 IPR008258 Transglycosylase SLT domain 1 BED34_04315 IPR023346 Lysozyme-like domain superfamily BED34_04315 IPR000189 Prokaryotic transglycosylase, active site BED34_04320 IPR007457 Fe(II) trafficking protein YggX BED34_04320 IPR036766 Fe(II) trafficking protein YggX superfamily BED34_04325 IPR005760 A/G-specific adenine glycosylase MutY BED34_04325 IPR011257 DNA glycosylase BED34_04325 IPR004036 Endonuclease III-like, conserved site-2 BED34_04325 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif BED34_04325 IPR015797 NUDIX hydrolase-like domain superfamily BED34_04325 IPR003265 HhH-GPD domain BED34_04325 IPR000445 Helix-hairpin-helix motif BED34_04325 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal BED34_04325 IPR004035 Endonuclease III, iron-sulphur binding site BED34_04325 IPR029119 MutY, C-terminal BED34_04330 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED34_04330 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type BED34_04335 IPR007416 Protein of unknown function DUF469 BED34_04340 IPR012338 Beta-lactamase/transpeptidase-like BED34_04340 IPR015868 Glutaminase BED34_04345 IPR021307 Protein of unknown function DUF2884 BED34_04350 IPR006638 Elp3/MiaB/NifB BED34_04350 IPR010723 HemN, C-terminal BED34_04350 IPR004559 Heme chaperone HemW-like BED34_04350 IPR034505 Anaerobic coproporphyrinogen-III oxidase BED34_04350 IPR023404 Radical SAM, alpha/beta horseshoe BED34_04350 IPR007197 Radical SAM BED34_04355 IPR020922 dITP/XTP pyrophosphatase BED34_04355 IPR029001 Inosine triphosphate pyrophosphatase-like BED34_04355 IPR002637 Ham1-like protein BED34_04360 IPR003746 Protein of unknown function DUF167 BED34_04360 IPR036591 YggU-like superfamily BED34_04360 IPR005228 Conserved hypothetical protein CHP00251 BED34_04365 IPR003425 CCB3/YggT BED34_04370 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BED34_04370 IPR036291 NAD(P)-binding domain superfamily BED34_04370 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal BED34_04370 IPR000304 Pyrroline-5-carboxylate reductase BED34_04370 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain BED34_04375 IPR001608 Alanine racemase, N-terminal BED34_04375 IPR011078 Pyridoxal phosphate homeostasis protein BED34_04375 IPR029066 PLP-binding barrel BED34_04380 IPR006321 Pilus retraction protein PilT BED34_04380 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_04380 IPR003593 AAA+ ATPase domain BED34_04380 IPR001482 Type II/IV secretion system protein BED34_04385 IPR017754 Agmatine deiminase BED34_04385 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type BED34_04390 IPR023719 Aliphatic amidase BED34_04390 IPR003010 Carbon-nitrogen hydrolase BED34_04390 IPR036526 Carbon-nitrogen hydrolase superfamily BED34_04395 IPR012337 Ribonuclease H-like superfamily BED34_04395 IPR006641 YqgF/RNase H-like domain BED34_04395 IPR005227 Putative pre-16S rRNA nuclease BED34_04395 IPR037027 YqgF/RNase H-like domain superfamily BED34_04400 IPR003774 Protein of unknown function UPF0301 BED34_04405 IPR011761 ATP-grasp fold BED34_04405 IPR016185 Pre-ATP-grasp domain superfamily BED34_04405 IPR004215 Prokaryotic glutathione synthetase, N-terminal BED34_04405 IPR006284 Glutathione synthetase, prokaryotic BED34_04405 IPR013815 ATP-grasp fold, subdomain 1 BED34_04405 IPR004218 Prokaryotic glutathione synthetase, ATP-binding BED34_04410 IPR029028 Alpha/beta knot methyltransferases BED34_04410 IPR015947 PUA-like superfamily BED34_04410 IPR006700 Ribosomal RNA small subunit methyltransferase E BED34_04410 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BED34_04415 IPR007346 Endonuclease I BED34_04420 IPR006640 SprT-like BED34_04420 IPR035240 SprT-like, zinc ribbon domain BED34_04420 IPR023483 Uncharacterised protein family SprT BED34_04425 IPR011991 ArsR-like helix-turn-helix domain BED34_04425 IPR001845 HTH ArsR-type DNA-binding domain BED34_04425 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_04425 IPR036390 Winged helix DNA-binding domain superfamily BED34_04430 IPR001207 Transposase, mutator type BED34_04435 IPR007272 Sulphur transport domain BED34_04445 IPR022629 S-adenosylmethionine synthetase, central domain BED34_04445 IPR022630 S-adenosylmethionine synthetase, C-terminal BED34_04445 IPR022631 S-adenosylmethionine synthetase, conserved site BED34_04445 IPR022628 S-adenosylmethionine synthetase, N-terminal BED34_04445 IPR002133 S-adenosylmethionine synthetase BED34_04445 IPR022636 S-adenosylmethionine synthetase superfamily BED34_04450 IPR029066 PLP-binding barrel BED34_04450 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site BED34_04450 IPR040634 Arginine decarboxylase, helical bundle domain BED34_04450 IPR041128 Arginine decarboxylase, C-terminal helical BED34_04450 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal BED34_04450 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal BED34_04450 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site BED34_04450 IPR000183 Ornithine/DAP/Arg decarboxylase BED34_04450 IPR002985 Arginine decarboxylase BED34_04455 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily BED34_04455 IPR017941 Rieske [2Fe-2S] iron-sulphur domain BED34_04460 IPR001915 Peptidase M48 BED34_04465 IPR033247 Transketolase family BED34_04465 IPR005474 Transketolase, N-terminal BED34_04465 IPR029061 Thiamin diphosphate-binding fold BED34_04465 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II BED34_04465 IPR005475 Transketolase-like, pyrimidine-binding domain BED34_04465 IPR033248 Transketolase, C-terminal domain BED34_04465 IPR005478 Transketolase, bacterial-like BED34_04465 IPR020826 Transketolase binding site BED34_04470 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family BED34_04470 IPR006422 D-erythrose-4-phosphate dehydrogenase BED34_04470 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site BED34_04470 IPR036291 NAD(P)-binding domain superfamily BED34_04470 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain BED34_04470 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain BED34_04475 IPR001576 Phosphoglycerate kinase BED34_04475 IPR015911 Phosphoglycerate kinase, conserved site BED34_04475 IPR036043 Phosphoglycerate kinase superfamily BED34_04475 IPR015824 Phosphoglycerate kinase, N-terminal BED34_04480 IPR000771 Fructose-bisphosphate aldolase, class-II BED34_04480 IPR013785 Aldolase-type TIM barrel BED34_04480 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype BED34_04485 IPR016130 Protein-tyrosine phosphatase, active site BED34_04485 IPR000387 Tyrosine specific protein phosphatases domain BED34_04485 IPR000242 PTP type protein phosphatase BED34_04485 IPR003595 Protein-tyrosine phosphatase, catalytic BED34_04485 IPR003546 Type III secreted modular tyrosine phosphatase, SptP/YopH BED34_04485 IPR036484 Protein-tyrosine phosphatase, YopH, N-terminal domain superfamily BED34_04485 IPR015103 Protein-tyrosine phosphatase, YopH, N-terminal BED34_04485 IPR029021 Protein-tyrosine phosphatase-like BED34_04490 IPR006686 Mechanosensitive ion channel MscS, conserved site BED34_04490 IPR010920 LSM domain superfamily BED34_04490 IPR023408 Mechanosensitive ion channel MscS domain superfamily BED34_04490 IPR011066 Mechanosensitive ion channel MscS, C-terminal BED34_04490 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 BED34_04490 IPR006685 Mechanosensitive ion channel MscS BED34_04490 IPR008910 Conserved TM helix BED34_04495 IPR003346 Transposase, IS116/IS110/IS902 BED34_04495 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED34_04500 IPR004777 L-lysine exporter/arginine exporter BED34_04500 IPR001123 Amino acid exporter protein, LeuE-type BED34_04500 IPR023445 Arginine exporter protein ArgO, enterobacteria BED34_04505 IPR007497 Protein of unknown function DUF541 BED34_04515 IPR037171 NagB/RpiA transferase-like BED34_04515 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup BED34_04515 IPR004788 Ribose 5-phosphate isomerase, type A BED34_04520 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site BED34_04520 IPR036291 NAD(P)-binding domain superfamily BED34_04520 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain BED34_04520 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BED34_04520 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 BED34_04520 IPR002912 ACT domain BED34_04555 IPR007197 Radical SAM BED34_04555 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria BED34_04555 IPR013785 Aldolase-type TIM barrel BED34_04555 IPR024924 7-carboxy-7-deazaguanine synthase-like BED34_04575 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily BED34_04575 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family BED34_04580 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding BED34_04580 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain BED34_04580 IPR017938 Riboflavin synthase-like beta-barrel BED34_04580 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria BED34_04580 IPR017927 FAD-binding domain, ferredoxin reductase-type BED34_04580 IPR001433 Oxidoreductase FAD/NAD(P)-binding BED34_04580 IPR008254 Flavodoxin/nitric oxide synthase BED34_04580 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase BED34_04580 IPR029039 Flavoprotein-like superfamily BED34_04580 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BED34_04580 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily BED34_04580 IPR001094 Flavodoxin-like BED34_04585 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit BED34_04585 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain BED34_04585 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site BED34_04585 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily BED34_04585 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain BED34_04590 IPR011800 Phosphoadenosine phosphosulphate reductase CysH BED34_04590 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase BED34_04590 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED34_04590 IPR002500 Phosphoadenosine phosphosulphate reductase BED34_04605 IPR007484 Peptidase M28 BED34_04610 IPR012409 Sirohaem synthase BED34_04610 IPR035996 Tetrapyrrole methylase superfamily BED34_04610 IPR000878 Tetrapyrrole methylase BED34_04610 IPR037115 Sirohaem synthase, dimerisation domain superfamily BED34_04610 IPR014777 Tetrapyrrole methylase, subdomain 1 BED34_04610 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site BED34_04610 IPR006366 Uroporphyrin-III C-methyltransferase BED34_04610 IPR006367 Sirohaem synthase, N-terminal BED34_04610 IPR019478 Sirohaem synthase, dimerisation domain BED34_04610 IPR014776 Tetrapyrrole methylase, subdomain 2 BED34_04610 IPR036291 NAD(P)-binding domain superfamily BED34_04610 IPR028281 Siroheme synthase, central domain BED34_04615 IPR011784 Sulphate adenylyltransferase, small subunit BED34_04615 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED34_04615 IPR002500 Phosphoadenosine phosphosulphate reductase BED34_04620 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal BED34_04620 IPR011779 Sulphate adenylyltransferase, large subunit BED34_04620 IPR000795 Transcription factor, GTP-binding domain BED34_04620 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain BED34_04620 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_04620 IPR031157 Tr-type G domain, conserved site BED34_04620 IPR009000 Translation protein, beta-barrel domain superfamily BED34_04620 IPR005225 Small GTP-binding protein domain BED34_04625 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_04625 IPR002891 Adenylyl-sulfate kinase BED34_04630 IPR022721 Protein of unknown function DUF3561 BED34_04635 IPR023081 Cell division protein FtsB BED34_04635 IPR007060 Septum formation initiator FtsL/DivIC BED34_04640 IPR029044 Nucleotide-diphospho-sugar transferases BED34_04640 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site BED34_04640 IPR034683 Cytidylyltransferase IspD/TarI BED34_04640 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BED34_04645 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site BED34_04645 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase BED34_04645 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily BED34_04650 IPR042214 Pseudouridine synthase, TruD, catalytic domain BED34_04650 IPR011760 Pseudouridine synthase, TruD, insertion domain BED34_04650 IPR020119 Pseudouridine synthase TruD, conserved site BED34_04650 IPR001656 Pseudouridine synthase, TruD BED34_04650 IPR020103 Pseudouridine synthase, catalytic domain superfamily BED34_04655 IPR030048 Survival protein SurE BED34_04655 IPR036523 SurE-like phosphatase/nucleotidase superfamily BED34_04655 IPR002828 Survival protein SurE-like phosphatase/nucleotidase BED34_04660 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase BED34_04660 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED34_04665 IPR016047 Peptidase M23 BED34_04665 IPR018392 LysM domain BED34_04665 IPR011055 Duplicated hybrid motif BED34_04665 IPR036779 LysM domain superfamily BED34_04670 IPR014284 RNA polymerase sigma-70 like domain BED34_04670 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_04670 IPR012761 RNA polymerase sigma factor RpoS BED34_04670 IPR000943 RNA polymerase sigma-70 BED34_04670 IPR013325 RNA polymerase sigma factor, region 2 BED34_04670 IPR007630 RNA polymerase sigma-70 region 4 BED34_04670 IPR007624 RNA polymerase sigma-70 region 3 BED34_04670 IPR007627 RNA polymerase sigma-70 region 2 BED34_04670 IPR009042 RNA polymerase sigma-70 region 1.2 BED34_04670 IPR013324 RNA polymerase sigma factor, region 3/4-like BED34_04675 IPR005748 DNA mismatch repair protein MutS BED34_04675 IPR007860 DNA mismatch repair protein MutS, connector domain BED34_04675 IPR036187 DNA mismatch repair protein MutS, core domain superfamily BED34_04675 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_04675 IPR007695 DNA mismatch repair protein MutS-like, N-terminal BED34_04675 IPR036678 MutS, connector domain superfamily BED34_04675 IPR000432 DNA mismatch repair protein MutS, C-terminal BED34_04675 IPR007861 DNA mismatch repair protein MutS, clamp BED34_04675 IPR007696 DNA mismatch repair protein MutS, core BED34_04675 IPR016151 DNA mismatch repair protein MutS, N-terminal BED34_04675 IPR017261 DNA mismatch repair protein MutS/MSH BED34_04690 IPR008966 Adhesion domain superfamily BED34_04690 IPR000259 Fimbrial-type adhesion domain BED34_04690 IPR036937 Fimbrial-type adhesion domain superfamily BED34_04695 IPR008966 Adhesion domain superfamily BED34_04695 IPR036937 Fimbrial-type adhesion domain superfamily BED34_04695 IPR000259 Fimbrial-type adhesion domain BED34_04700 IPR037224 PapC, N-terminal domain superfamily BED34_04700 IPR025885 PapC, N-terminal domain BED34_04700 IPR025949 PapC-like, C-terminal domain BED34_04700 IPR042186 Outer membrane usher protein FimD, plug domain BED34_04700 IPR018030 Fimbrial membrane usher, conserved site BED34_04700 IPR000015 Outer membrane usher protein BED34_04705 IPR013783 Immunoglobulin-like fold BED34_04705 IPR008962 PapD-like superfamily BED34_04705 IPR036316 Pili assembly chaperone, C-terminal domain superfamily BED34_04705 IPR001829 Pili assembly chaperone, bacterial BED34_04705 IPR016148 Pili assembly chaperone, C-terminal BED34_04705 IPR018046 Pili assembly chaperone, conserved site BED34_04705 IPR016147 Pili assembly chaperone, N-terminal BED34_04715 IPR008966 Adhesion domain superfamily BED34_04715 IPR036937 Fimbrial-type adhesion domain superfamily BED34_04715 IPR000259 Fimbrial-type adhesion domain BED34_04720 IPR036937 Fimbrial-type adhesion domain superfamily BED34_04720 IPR000259 Fimbrial-type adhesion domain BED34_04720 IPR008966 Adhesion domain superfamily BED34_04745 IPR017871 ABC transporter, conserved site BED34_04745 IPR003439 ABC transporter-like BED34_04745 IPR036640 ABC transporter type 1, transmembrane domain superfamily BED34_04745 IPR039421 Type I protein exporter BED34_04745 IPR003593 AAA+ ATPase domain BED34_04745 IPR005074 Peptidase C39, bacteriocin processing BED34_04745 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_04745 IPR033838 Colicin V processing peptidase BED34_04745 IPR011527 ABC transporter type 1, transmembrane domain BED34_04750 IPR006143 RND efflux pump, membrane fusion protein BED34_04750 IPR030190 Macrolide export protein MacA BED34_04750 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BED34_04755 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_04755 IPR025857 MacB-like periplasmic core domain BED34_04755 IPR017911 ABC transporter, macrolide export, ATP-binding domain BED34_04755 IPR017871 ABC transporter, conserved site BED34_04755 IPR003439 ABC transporter-like BED34_04755 IPR003838 ABC transporter permease protein domain BED34_04755 IPR003593 AAA+ ATPase domain BED34_04760 IPR010131 RND efflux system, outer membrane lipoprotein, NodT BED34_04760 IPR003423 Outer membrane efflux protein BED34_04765 IPR016039 Thiolase-like BED34_04765 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BED34_04765 IPR014030 Beta-ketoacyl synthase, N-terminal BED34_04765 IPR014031 Beta-ketoacyl synthase, C-terminal BED34_04765 IPR018201 Beta-ketoacyl synthase, active site BED34_04765 IPR000794 Beta-ketoacyl synthase BED34_04765 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 BED34_04780 IPR002347 Short-chain dehydrogenase/reductase SDR BED34_04780 IPR020904 Short-chain dehydrogenase/reductase, conserved site BED34_04780 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase BED34_04780 IPR036291 NAD(P)-binding domain superfamily BED34_04785 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED34_04785 IPR004839 Aminotransferase, class I/classII BED34_04785 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED34_04785 IPR005861 Histidinol-phosphate aminotransferase family BED34_04785 IPR015424 Pyridoxal phosphate-dependent transferase BED34_04790 IPR009056 Cytochrome c-like domain BED34_04790 IPR036909 Cytochrome c-like domain superfamily BED34_04790 IPR004852 Di-haem cytochrome c peroxidase BED34_04790 IPR025992 Haem-binding domain BED34_04800 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BED34_04800 IPR035647 EF-G domain III/V-like BED34_04800 IPR035649 EFG, domain V BED34_04800 IPR004161 Translation elongation factor EFTu-like, domain 2 BED34_04800 IPR020568 Ribosomal protein S5 domain 2-type fold BED34_04800 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_04800 IPR041095 Elongation Factor G, domain II BED34_04800 IPR000640 Elongation factor EFG, domain V-like BED34_04800 IPR031157 Tr-type G domain, conserved site BED34_04800 IPR009022 Elongation factor G, domain III BED34_04800 IPR009000 Translation protein, beta-barrel domain superfamily BED34_04800 IPR004540 Translation elongation factor EFG/EF2 BED34_04800 IPR005517 Translation elongation factor EFG/EF2, domain IV BED34_04800 IPR005225 Small GTP-binding protein domain BED34_04800 IPR000795 Transcription factor, GTP-binding domain BED34_04805 IPR036390 Winged helix DNA-binding domain superfamily BED34_04805 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_04805 IPR001845 HTH ArsR-type DNA-binding domain BED34_04805 IPR011991 ArsR-like helix-turn-helix domain BED34_04810 IPR013154 Alcohol dehydrogenase, N-terminal BED34_04810 IPR011032 GroES-like superfamily BED34_04810 IPR036291 NAD(P)-binding domain superfamily BED34_04810 IPR013149 Alcohol dehydrogenase, C-terminal BED34_04815 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component BED34_04820 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit BED34_04830 IPR033887 PTS system mannose/sorbose specific IIA subunit BED34_04830 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily BED34_04830 IPR013789 Phosphotransferase system, mannose family IIA component BED34_04830 IPR004701 Phosphotransferase system, mannose-type IIA component BED34_04835 IPR007324 Sugar-binding domain, putative BED34_04835 IPR009057 Homeobox-like domain superfamily BED34_04835 IPR025246 Transposase IS30-like HTH domain BED34_04835 IPR037171 NagB/RpiA transferase-like BED34_04835 IPR011991 ArsR-like helix-turn-helix domain BED34_04840 IPR036526 Carbon-nitrogen hydrolase superfamily BED34_04840 IPR003010 Carbon-nitrogen hydrolase BED34_04860 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein BED34_04860 IPR003593 AAA+ ATPase domain BED34_04860 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_04860 IPR017871 ABC transporter, conserved site BED34_04860 IPR003439 ABC transporter-like BED34_04865 IPR003439 ABC transporter-like BED34_04865 IPR030921 LPS export ABC transporter, ATP-binding protein LptB BED34_04865 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_04865 IPR003593 AAA+ ATPase domain BED34_04865 IPR017871 ABC transporter, conserved site BED34_04870 IPR001851 ABC transporter, permease BED34_04870 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal BED34_04875 IPR001851 ABC transporter, permease BED34_04880 IPR000709 Leu/Ile/Val-binding protein BED34_04880 IPR028082 Periplasmic binding protein-like I BED34_04880 IPR028081 Leucine-binding protein domain BED34_04885 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain BED34_04885 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain BED34_04885 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily BED34_04885 IPR011167 Iron-dependent fumarate hydratase BED34_04885 IPR020557 Fumarate lyase, conserved site BED34_04890 IPR006311 Twin-arginine translocation pathway, signal sequence BED34_04890 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site BED34_04890 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain BED34_04890 IPR006656 Molybdopterin oxidoreductase BED34_04890 IPR006657 Molybdopterin dinucleotide-binding domain BED34_04890 IPR009010 Aspartate decarboxylase-like domain superfamily BED34_04890 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE BED34_04890 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site BED34_04890 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal BED34_04895 IPR014297 Dimethylsulphoxide reductase, chain B BED34_04895 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BED34_04895 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BED34_04900 IPR007059 DMSO reductase anchor subunit (DmsC) BED34_04905 IPR028611 Tat proofreading chaperone DmsD BED34_04905 IPR020945 DMSO/Nitrate reductase chaperone BED34_04905 IPR026269 Tat proofreading chaperone DmsD-type BED34_04905 IPR036411 TorD-like superfamily BED34_04910 IPR003346 Transposase, IS116/IS110/IS902 BED34_04910 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED34_04915 IPR020846 Major facilitator superfamily domain BED34_04915 IPR036259 MFS transporter superfamily BED34_04915 IPR023745 MSF-type transporter, YcaD BED34_04915 IPR011701 Major facilitator superfamily BED34_04920 IPR036653 CinA-like, C-terminal BED34_04920 IPR008136 CinA, C-terminal BED34_04925 IPR020584 DNA recombination/repair protein RecA, conserved site BED34_04925 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain BED34_04925 IPR023400 DNA recombination and repair protein RecA, C-terminal BED34_04925 IPR013765 DNA recombination and repair protein RecA BED34_04925 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface BED34_04925 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_04925 IPR003593 AAA+ ATPase domain BED34_04930 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_04930 IPR003783 Regulatory protein RecX BED34_04935 IPR002318 Alanine-tRNA ligase, class IIc BED34_04935 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain BED34_04935 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily BED34_04935 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily BED34_04935 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal BED34_04935 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria BED34_04935 IPR003156 DHHA1 domain BED34_04935 IPR012947 Threonyl/alanyl tRNA synthetase, SAD BED34_04935 IPR009000 Translation protein, beta-barrel domain superfamily BED34_04940 IPR003751 Translational regulator CsrA BED34_04940 IPR036107 Carbon storage regulator superfamily BED34_04960 IPR023214 HAD superfamily BED34_04960 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BED34_04960 IPR010976 Beta-phosphoglucomutase hydrolase BED34_04960 IPR036412 HAD-like superfamily BED34_04960 IPR006439 HAD hydrolase, subfamily IA BED34_04960 IPR041492 Haloacid dehalogenase-like hydrolase BED34_04970 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain BED34_04970 IPR007370 Glutamate--cysteine ligase BED34_04970 IPR006334 Glutamate--cysteine ligase, monofunctional BED34_04975 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily BED34_04975 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like BED34_04975 IPR003815 S-ribosylhomocysteinase (LuxS) BED34_04980 IPR005170 Transporter-associated domain BED34_04980 IPR000644 CBS domain BED34_04980 IPR036318 FAD-binding, type PCMH-like superfamily BED34_04980 IPR002550 CNNM, transmembrane domain BED34_04980 IPR016169 FAD-binding, type PCMH, subdomain 2 BED34_04985 IPR003346 Transposase, IS116/IS110/IS902 BED34_04985 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED34_04995 IPR002541 Cytochrome c assembly protein BED34_05000 IPR022941 Signal recognition particle, SRP54 subunit BED34_05000 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_05000 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily BED34_05000 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain BED34_05000 IPR004780 Signal recognition particle protein BED34_05000 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily BED34_05000 IPR004125 Signal recognition particle, SRP54 subunit, M-domain BED34_05000 IPR003593 AAA+ ATPase domain BED34_05000 IPR013822 Signal recognition particle SRP54, helical bundle BED34_05005 IPR023803 Ribosomal protein S16 domain superfamily BED34_05005 IPR020592 Ribosomal protein S16, conserved site BED34_05005 IPR000307 Ribosomal protein S16 BED34_05010 IPR009000 Translation protein, beta-barrel domain superfamily BED34_05010 IPR011961 16S rRNA processing protein RimM BED34_05010 IPR027275 PRC-barrel domain BED34_05010 IPR002676 RimM, N-terminal BED34_05010 IPR011033 PRC-barrel-like superfamily BED34_05010 IPR036976 RimM, N-terminal domain superfamily BED34_05015 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BED34_05015 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal BED34_05015 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria BED34_05015 IPR029028 Alpha/beta knot methyltransferases BED34_05015 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain BED34_05020 IPR018257 Ribosomal protein L19, conserved site BED34_05020 IPR001857 Ribosomal protein L19 BED34_05020 IPR038657 Ribosomal protein L19 superfamily BED34_05020 IPR008991 Translation protein SH3-like domain superfamily BED34_05030 IPR004668 Anaerobic c4-dicarboxylate membrane transporter BED34_05035 IPR011006 CheY-like superfamily BED34_05035 IPR007492 LytTR DNA-binding domain BED34_05035 IPR001789 Signal transduction response regulator, receiver domain BED34_05040 IPR006218 DAHP synthetase I/KDSA BED34_05040 IPR013785 Aldolase-type TIM barrel BED34_05040 IPR006219 DHAP synthase, class 1 BED34_05045 IPR002701 Chorismate mutase II, prokaryotic-type BED34_05045 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BED34_05045 IPR011277 Chorismate mutase, T-protein BED34_05045 IPR036291 NAD(P)-binding domain superfamily BED34_05045 IPR036979 Chorismate mutase domain superfamily BED34_05045 IPR003099 Prephenate dehydrogenase BED34_05045 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein BED34_05045 IPR036263 Chorismate mutase type II superfamily BED34_05050 IPR010952 Chorismate mutase, gammaproteobacteria BED34_05050 IPR036979 Chorismate mutase domain superfamily BED34_05050 IPR002912 ACT domain BED34_05050 IPR001086 Prephenate dehydratase BED34_05050 IPR036263 Chorismate mutase type II superfamily BED34_05050 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase BED34_05050 IPR002701 Chorismate mutase II, prokaryotic-type BED34_05050 IPR018528 Prephenate dehydratase, conserved site BED34_05055 IPR003346 Transposase, IS116/IS110/IS902 BED34_05055 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED34_05060 IPR017730 Chaperonin ClpB BED34_05060 IPR003959 ATPase, AAA-type, core BED34_05060 IPR019489 Clp ATPase, C-terminal BED34_05060 IPR036628 Clp, N-terminal domain superfamily BED34_05060 IPR004176 Clp, N-terminal BED34_05060 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_05060 IPR041546 ClpA/ClpB, AAA lid domain BED34_05060 IPR028299 ClpA/B, conserved site 2 BED34_05060 IPR001270 ClpA/B family BED34_05060 IPR018368 ClpA/B, conserved site 1 BED34_05060 IPR003593 AAA+ ATPase domain BED34_05070 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site BED34_05070 IPR006225 Pseudouridine synthase, RluC/RluD BED34_05070 IPR020103 Pseudouridine synthase, catalytic domain superfamily BED34_05070 IPR006145 Pseudouridine synthase, RsuA/RluA BED34_05070 IPR002942 RNA-binding S4 domain BED34_05070 IPR036986 RNA-binding S4 domain superfamily BED34_05075 IPR011990 Tetratricopeptide-like helical domain superfamily BED34_05075 IPR039565 Outer membrane lipoprotein BamD-like BED34_05075 IPR017689 Outer membrane protein assembly factor BamD BED34_05085 IPR003489 Ribosome hibernation promoting factor/RaiA BED34_05085 IPR036567 Ribosome hibernation promotion factor-like BED34_05090 IPR001207 Transposase, mutator type BED34_05095 IPR003346 Transposase, IS116/IS110/IS902 BED34_05095 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED34_05125 IPR018736 Protein of unknown function DUF2279, periplasmic lipoprotein BED34_05125 IPR017028 Uncharacterised conserved protein UCP034456 BED34_05130 IPR001736 Phospholipase D/Transphosphatidylase BED34_05130 IPR025202 Phospholipase D-like domain BED34_05130 IPR016270 CDP-alcohol phosphatidyltransferase class-II family BED34_05135 IPR013815 ATP-grasp fold, subdomain 1 BED34_05135 IPR016102 Succinyl-CoA synthetase-like BED34_05135 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain BED34_05135 IPR016181 Acyl-CoA N-acyltransferase BED34_05135 IPR036291 NAD(P)-binding domain superfamily BED34_05135 IPR011761 ATP-grasp fold BED34_05135 IPR000182 GNAT domain BED34_05135 IPR003781 CoA-binding BED34_05145 IPR036249 Thioredoxin-like superfamily BED34_05145 IPR005746 Thioredoxin BED34_05145 IPR013766 Thioredoxin domain BED34_05145 IPR017937 Thioredoxin, conserved site BED34_05150 IPR029028 Alpha/beta knot methyltransferases BED34_05150 IPR029064 50S ribosomal protein L30e-like BED34_05150 IPR004441 RNA methyltransferase TrmH family BED34_05150 IPR001537 tRNA/rRNA methyltransferase, SpoU type BED34_05150 IPR016479 tRNA/rRNA methyltransferase, YfiF, predicted BED34_05150 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BED34_05150 IPR013123 RNA 2-O ribose methyltransferase, substrate binding BED34_05155 IPR004638 Drug resistance transporter EmrB-like BED34_05155 IPR011701 Major facilitator superfamily BED34_05155 IPR020846 Major facilitator superfamily domain BED34_05155 IPR036259 MFS transporter superfamily BED34_05160 IPR005694 Efflux pump membrane protein BED34_05160 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BED34_05165 IPR010131 RND efflux system, outer membrane lipoprotein, NodT BED34_05165 IPR003423 Outer membrane efflux protein BED34_05170 IPR000835 MarR-type HTH domain BED34_05170 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_05170 IPR036390 Winged helix DNA-binding domain superfamily BED34_05170 IPR023187 Transcriptional regulator MarR-type, conserved site BED34_05175 IPR008407 Branched-chain amino acid transport, AzlD BED34_05180 IPR011606 Branched-chain amino acid transport, permease BED34_05185 IPR036259 MFS transporter superfamily BED34_05185 IPR020846 Major facilitator superfamily domain BED34_05185 IPR011701 Major facilitator superfamily BED34_05200 IPR000120 Amidase BED34_05200 IPR023631 Amidase signature domain BED34_05200 IPR036928 Amidase signature (AS) superfamily BED34_05200 IPR014087 1-carboxybiuret hydrolase, AtzE subunit BED34_05215 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter BED34_05215 IPR018313 Solute-binding protein family 3, conserved site BED34_05215 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BED34_05215 IPR001320 Ionotropic glutamate receptor BED34_05220 IPR035906 MetI-like superfamily BED34_05220 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED34_05220 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain BED34_05225 IPR035906 MetI-like superfamily BED34_05225 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED34_05225 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain BED34_05230 IPR017871 ABC transporter, conserved site BED34_05230 IPR003593 AAA+ ATPase domain BED34_05230 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_05230 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type BED34_05230 IPR003439 ABC transporter-like BED34_05245 IPR003010 Carbon-nitrogen hydrolase BED34_05245 IPR036526 Carbon-nitrogen hydrolase superfamily BED34_05245 IPR001110 Uncharacterised protein family UPF0012, conserved site BED34_05250 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED34_05250 IPR004839 Aminotransferase, class I/classII BED34_05250 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED34_05250 IPR015424 Pyridoxal phosphate-dependent transferase BED34_05255 IPR010998 Integrase/recombinase, N-terminal BED34_05255 IPR002104 Integrase, catalytic domain BED34_05255 IPR013762 Integrase-like, catalytic domain superfamily BED34_05255 IPR022000 Min27-like integrase, DNA-binding domain BED34_05255 IPR011010 DNA breaking-rejoining enzyme, catalytic core BED34_05265 IPR007757 MT-A70-like BED34_05265 IPR002052 DNA methylase, N-6 adenine-specific, conserved site BED34_05265 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED34_05310 IPR024432 Putative exodeoxyribonuclease 8, PDDEXK-like domain BED34_05310 IPR010584 Exodeoxyribonuclease 8 BED34_05390 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_05390 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein BED34_05390 IPR002611 IstB-like ATP-binding protein BED34_05425 IPR010774 Protein of unknown function DUF1364 BED34_05430 IPR008822 Holliday junction resolvase RusA-like BED34_05430 IPR036614 Holliday junction resolvase RusA-like superfamily BED34_05430 IPR016281 Crossover junction endodeoxyribonuclease, RusA BED34_05460 IPR004929 Spanin, inner membrane subunit BED34_05625 IPR017714 Methylthioribulose-1-phosphate dehydratase BED34_05625 IPR036409 Class II aldolase/adducin N-terminal domain superfamily BED34_05625 IPR001303 Class II aldolase/adducin N-terminal BED34_05630 IPR023943 Enolase-phosphatase E1 BED34_05630 IPR036412 HAD-like superfamily BED34_05630 IPR006439 HAD hydrolase, subfamily IA BED34_05630 IPR023214 HAD superfamily BED34_05635 IPR004313 Acireductone dioxygenase ARD family BED34_05635 IPR023956 Acireductone dioxygenase ARD, bacteria BED34_05635 IPR014710 RmlC-like jelly roll fold BED34_05635 IPR011051 RmlC-like cupin domain superfamily BED34_05640 IPR000649 Initiation factor 2B-related BED34_05640 IPR011559 Initiation factor 2B alpha/beta/delta BED34_05640 IPR037171 NagB/RpiA transferase-like BED34_05640 IPR005251 Methylthioribose-1-phosphate isomerase BED34_05640 IPR027363 Methylthioribose-1-phosphate isomerase, N-terminal BED34_05645 IPR009212 Methylthioribose kinase BED34_05645 IPR002575 Aminoglycoside phosphotransferase BED34_05645 IPR011009 Protein kinase-like domain superfamily BED34_05650 IPR034746 POTRA domain BED34_05650 IPR013686 Polypeptide-transport-associated, ShlB-type BED34_05650 IPR005565 Haemolysin activator HlyB, C-terminal BED34_05665 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal BED34_05665 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal BED34_05665 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily BED34_05665 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily BED34_05665 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type BED34_05665 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal BED34_05670 IPR001347 Sugar isomerase (SIS) BED34_05670 IPR035461 GmhA/DiaA BED34_05670 IPR004515 Phosphoheptose isomerase BED34_05675 IPR017932 Glutamine amidotransferase type 2 domain BED34_05675 IPR026869 Putative glutamine amidotransferase type 2 BED34_05675 IPR029055 Nucleophile aminohydrolases, N-terminal BED34_05680 IPR038063 L,D-transpeptidase catalytic domain-like BED34_05680 IPR005490 L,D-transpeptidase catalytic domain BED34_05685 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain BED34_05685 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A BED34_05690 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD BED34_05690 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B BED34_05695 IPR007329 FMN-binding BED34_05695 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C BED34_05700 IPR003667 NqrDE/RnfAE BED34_05700 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D BED34_05710 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain BED34_05710 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BED34_05710 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F BED34_05710 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain BED34_05710 IPR017927 FAD-binding domain, ferredoxin reductase-type BED34_05710 IPR036010 2Fe-2S ferredoxin-like superfamily BED34_05710 IPR001433 Oxidoreductase FAD/NAD(P)-binding BED34_05710 IPR017938 Riboflavin synthase-like beta-barrel BED34_05710 IPR012675 Beta-grasp domain superfamily BED34_05710 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase BED34_05715 IPR024932 Flavin transferase ApbE BED34_05715 IPR042159 Flavin-trafficking protein ApbE BED34_05715 IPR003374 ApbE-like superfamily BED34_05720 IPR007495 (Na+)-NQR maturation factor NqrM BED34_05725 IPR030395 Glycerophosphodiester phosphodiesterase domain BED34_05725 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily BED34_05730 IPR013815 ATP-grasp fold, subdomain 1 BED34_05730 IPR011095 D-alanine--D-alanine ligase, C-terminal BED34_05730 IPR011127 D-alanine--D-alanine ligase, N-terminal domain BED34_05730 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site BED34_05730 IPR016185 Pre-ATP-grasp domain superfamily BED34_05730 IPR011761 ATP-grasp fold BED34_05730 IPR005905 D-alanine--D-alanine ligase BED34_05735 IPR013559 YheO-like BED34_05735 IPR039446 Transcriptional regulator DauR-like BED34_05735 IPR039445 Transcriptional regulator DauR-like, HTH domain BED34_05740 IPR001926 Pyridoxal-phosphate dependent enzyme BED34_05740 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site BED34_05740 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BED34_05750 IPR036775 DNA polymerase, Y-family, little finger domain superfamily BED34_05750 IPR017961 DNA polymerase, Y-family, little finger domain BED34_05750 IPR024728 DNA polymerase type-Y, HhH motif BED34_05750 IPR001126 UmuC domain BED34_05750 IPR022880 DNA polymerase IV BED34_05755 IPR001160 Peptidase M20C, Xaa-His dipeptidase BED34_05755 IPR011650 Peptidase M20, dimerisation domain BED34_05755 IPR002933 Peptidase M20 BED34_05760 IPR000836 Phosphoribosyltransferase domain BED34_05760 IPR029057 Phosphoribosyltransferase-like BED34_05760 IPR023747 Xanthine-guanine phosphoribosyltransferase BED34_05765 IPR003346 Transposase, IS116/IS110/IS902 BED34_05765 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED34_05775 IPR009986 Sigma factor-binding transcriptional regulator Crl BED34_05775 IPR038208 Sigma factor-binding protein Crl superfamily BED34_05780 IPR019797 Glutamate 5-kinase, conserved site BED34_05780 IPR036393 Acetylglutamate kinase-like superfamily BED34_05780 IPR001048 Aspartate/glutamate/uridylate kinase BED34_05780 IPR002478 PUA domain BED34_05780 IPR015947 PUA-like superfamily BED34_05780 IPR011529 Glutamate 5-kinase BED34_05780 IPR041739 Glutamate-5-kinase domain BED34_05780 IPR001057 Glutamate/acetylglutamate kinase BED34_05780 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase BED34_05780 IPR036974 PUA domain superfamily BED34_05785 IPR012134 Glutamate-5-semialdehyde dehydrogenase BED34_05785 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site BED34_05785 IPR015590 Aldehyde dehydrogenase domain BED34_05785 IPR016162 Aldehyde dehydrogenase, N-terminal BED34_05785 IPR016163 Aldehyde dehydrogenase, C-terminal BED34_05785 IPR016161 Aldehyde/histidinol dehydrogenase BED34_05785 IPR000965 GPR domain BED34_05790 IPR000524 Transcription regulator HTH, GntR BED34_05790 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily BED34_05790 IPR011663 UbiC transcription regulator-associated BED34_05790 IPR036390 Winged helix DNA-binding domain superfamily BED34_05790 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_05795 IPR010975 Phosphotransferase system, alpha-glucoside-specific IIBC component BED34_05795 IPR001996 Phosphotransferase system, IIB component, type 1 BED34_05795 IPR013013 Phosphotransferase system, EIIC component, type 1 BED34_05795 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component BED34_05795 IPR003352 Phosphotransferase system, EIIC BED34_05795 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site BED34_05795 IPR036878 Glucose permease domain IIB BED34_05800 IPR036291 NAD(P)-binding domain superfamily BED34_05800 IPR022616 Glycosyl hydrolase, family 4, C-terminal BED34_05800 IPR001088 Glycoside hydrolase, family 4 BED34_05800 IPR019802 Glycoside hydrolase, family 4, conserved site BED34_05800 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal BED34_05805 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal BED34_05805 IPR023787 Type III secretion system flagellar brake protein YcgR BED34_05805 IPR012349 FMN-binding split barrel BED34_05805 IPR009875 PilZ domain BED34_05810 IPR012341 Six-hairpin glycosidase-like superfamily BED34_05810 IPR011013 Galactose mutarotase-like domain superfamily BED34_05810 IPR033432 Glycosyl hydrolase 36, catalytic domain BED34_05810 IPR010383 Glycosyl hydrolase 94 BED34_05810 IPR037824 NdvB, GH94N domain 2 BED34_05810 IPR008928 Six-hairpin glycosidase superfamily BED34_05810 IPR019282 Domain of unknown function DUF2329 BED34_05810 IPR037820 NdvB, GH94N domain 1 BED34_05810 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily BED34_05810 IPR009342 Putative carbohydrate binding domain BED34_05825 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED34_05825 IPR013216 Methyltransferase type 11 BED34_05845 IPR000531 TonB-dependent receptor-like, beta-barrel BED34_05845 IPR039423 TonB-dependent receptor-like BED34_05845 IPR037066 TonB-dependent receptor, plug domain superfamily BED34_05845 IPR012910 TonB-dependent receptor, plug domain BED34_05845 IPR010105 TonB-dependent siderophore receptor BED34_05845 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BED34_05850 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_05850 IPR027544 Shikimate kinase 2 BED34_05850 IPR023000 Shikimate kinase, conserved site BED34_05850 IPR000623 Shikimate kinase/Threonine synthase-like 1 BED34_05850 IPR031322 Shikimate kinase/gluconokinase BED34_05855 IPR011051 RmlC-like cupin domain superfamily BED34_05855 IPR014710 RmlC-like jelly roll fold BED34_05855 IPR009664 Pyrimidine/purine nucleoside phosphorylase BED34_05860 IPR007476 Putative exonuclease, RdgC BED34_05865 IPR000600 ROK family BED34_05870 IPR004592 Nuclease SbcC, gammaproteobacteria type BED34_05870 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_05870 IPR038729 Rad50/SbcC-type AAA domain BED34_05875 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type BED34_05875 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain BED34_05875 IPR029052 Metallo-dependent phosphatase-like BED34_05875 IPR004593 Nuclease SbcCD subunit D BED34_05875 IPR026843 Nuclease SbcCD subunit D, C-terminal domain BED34_05880 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB BED34_05880 IPR001867 OmpR/PhoB-type DNA-binding domain BED34_05880 IPR011006 CheY-like superfamily BED34_05880 IPR039420 Transcriptional regulatory protein WalR-like BED34_05880 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_05880 IPR001789 Signal transduction response regulator, receiver domain BED34_05885 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BED34_05885 IPR021766 Phosphate regulon sensor protein PhoR BED34_05885 IPR013767 PAS fold BED34_05885 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR BED34_05885 IPR000014 PAS domain BED34_05885 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BED34_05885 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BED34_05885 IPR005467 Histidine kinase domain BED34_05885 IPR003594 Histidine kinase/HSP90-like ATPase BED34_05885 IPR035965 PAS domain superfamily BED34_05885 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BED34_05890 IPR024370 PBP domain BED34_05890 IPR011862 Phosphate binding protein BED34_05895 IPR004685 Branched-chain amino acid transport system II carrier protein BED34_05900 IPR004840 Amino acid permease, conserved site BED34_05900 IPR004841 Amino acid permease/ SLC12A domain BED34_05905 IPR017069 Maltodextrin glucosidase BED34_05905 IPR017853 Glycoside hydrolase superfamily BED34_05905 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain BED34_05905 IPR014756 Immunoglobulin E-set BED34_05905 IPR013780 Glycosyl hydrolase, all-beta BED34_05905 IPR006047 Glycosyl hydrolase, family 13, catalytic domain BED34_05910 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase BED34_05910 IPR036291 NAD(P)-binding domain superfamily BED34_05910 IPR020904 Short-chain dehydrogenase/reductase, conserved site BED34_05910 IPR002347 Short-chain dehydrogenase/reductase SDR BED34_05915 IPR000101 Gamma-glutamyltranspeptidase BED34_05915 IPR029055 Nucleophile aminohydrolases, N-terminal BED34_05920 IPR018084 Hok/gef cell toxic protein, conserved site BED34_05920 IPR000021 Hok/gef cell toxic protein BED34_05925 IPR036249 Thioredoxin-like superfamily BED34_05925 IPR019479 Peroxiredoxin, C-terminal BED34_05925 IPR024706 Peroxiredoxin, AhpC-type BED34_05925 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant BED34_05925 IPR013766 Thioredoxin domain BED34_05930 IPR023491 Acyl carrier protein phosphodiesterase, gammaproteobacteria BED34_05930 IPR007431 Acyl carrier protein phosphodiesterase BED34_05935 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily BED34_05935 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA BED34_05935 IPR042118 QueA, domain 1 BED34_05935 IPR042119 QueA, domain 2 BED34_05945 IPR036511 Queuine tRNA-ribosyltransferase-like BED34_05945 IPR002616 tRNA-guanine(15) transglycosylase-like BED34_05945 IPR004803 tRNA-guanine transglycosylase BED34_05950 IPR003849 Preprotein translocase YajC BED34_05955 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial BED34_05955 IPR005791 Protein translocase subunit SecD BED34_05955 IPR022645 Protein-export membrane protein SecD/SecF, bacterial BED34_05955 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site BED34_05955 IPR027398 SecD export protein N-terminal TM domain BED34_05960 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site BED34_05960 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial BED34_05960 IPR005665 Protein-export membrane protein SecF, bacterial BED34_05960 IPR022645 Protein-export membrane protein SecD/SecF, bacterial BED34_05975 IPR005144 ATP-cone domain BED34_05975 IPR003796 Ribonucleotide reductase regulator NrdR-like BED34_05980 IPR016193 Cytidine deaminase-like BED34_05980 IPR016192 APOBEC/CMP deaminase, zinc-binding BED34_05980 IPR002125 Cytidine and deoxycytidylate deaminase domain BED34_05980 IPR011549 Riboflavin-specific deaminase, C-terminal BED34_05980 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal BED34_05980 IPR024072 Dihydrofolate reductase-like domain superfamily BED34_05980 IPR004794 Riboflavin biosynthesis protein RibD BED34_05985 IPR034964 Lumazine synthase BED34_05985 IPR036467 Lumazine/riboflavin synthase superfamily BED34_05985 IPR002180 Lumazine/riboflavin synthase BED34_05990 IPR006027 NusB/RsmB/TIM44 BED34_05990 IPR011605 NusB antitermination factor BED34_05990 IPR035926 NusB-like superfamily BED34_05995 IPR016188 PurM-like, N-terminal domain BED34_05995 IPR036921 PurM-like, N-terminal domain superfamily BED34_05995 IPR006283 Thiamine-monophosphate kinase BED34_05995 IPR010918 PurM-like, C-terminal domain BED34_05995 IPR036676 PurM-like, C-terminal domain superfamily BED34_06000 IPR007686 YutG/PgpA domain BED34_06000 IPR036681 PgpA-like superfamily BED34_06000 IPR026037 Phosphatidylglycerophosphatase A BED34_06005 IPR003346 Transposase, IS116/IS110/IS902 BED34_06005 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED34_06010 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II BED34_06010 IPR033248 Transketolase, C-terminal domain BED34_06010 IPR005475 Transketolase-like, pyrimidine-binding domain BED34_06010 IPR020826 Transketolase binding site BED34_06010 IPR005477 Deoxyxylulose-5-phosphate synthase BED34_06010 IPR029061 Thiamin diphosphate-binding fold BED34_06015 IPR033749 Polyprenyl synthetase, conserved site BED34_06015 IPR000092 Polyprenyl synthetase BED34_06015 IPR008949 Isoprenoid synthase domain superfamily BED34_06020 IPR037004 Exonuclease VII, small subunit superfamily BED34_06020 IPR003761 Exonuclease VII, small subunit BED34_06025 IPR001763 Rhodanese-like domain BED34_06025 IPR036873 Rhodanese-like domain superfamily BED34_06025 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED34_06025 IPR026340 Thiazole biosynthesis domain BED34_06025 IPR004114 THUMP domain BED34_06025 IPR003720 tRNA sulfurtransferase ThiI BED34_06025 IPR020536 Thil, AANH domain BED34_06030 IPR029062 Class I glutamine amidotransferase-like BED34_06030 IPR006287 Protein/nucleic acid deglycase DJ-1 BED34_06030 IPR002818 DJ-1/PfpI BED34_06035 IPR036291 NAD(P)-binding domain superfamily BED34_06035 IPR013332 Ketopantoate reductase, N-terminal domain BED34_06035 IPR013752 Ketopantoate reductase, C-terminal domain BED34_06035 IPR003710 Ketopantoate reductase ApbA/PanE BED34_06035 IPR013328 6-phosphogluconate dehydrogenase, domain 2 BED34_06035 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BED34_06040 IPR007551 Protein of unknown function DUF520 BED34_06040 IPR035571 UPF0234-like, C-terminal BED34_06040 IPR035570 UPF0234, N-terminal BED34_06040 IPR036183 YajQ-like superfamily BED34_06045 IPR020846 Major facilitator superfamily domain BED34_06045 IPR011701 Major facilitator superfamily BED34_06045 IPR036259 MFS transporter superfamily BED34_06050 IPR030470 UbiA prenyltransferase conserved site BED34_06050 IPR000537 UbiA prenyltransferase family BED34_06050 IPR006369 Protohaem IX farnesyltransferase BED34_06055 IPR014210 Cytochrome o ubiquinol oxidase subunit IV BED34_06055 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes BED34_06060 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle BED34_06060 IPR035973 Cytochrome c oxidase subunit III-like superfamily BED34_06060 IPR000298 Cytochrome c oxidase subunit III-like BED34_06060 IPR024791 Cytochrome c oxidase subunit III BED34_06060 IPR014206 Cytochrome o ubiquinol oxidase, subunit III BED34_06060 IPR033946 Ubiquinol oxidase subunit III domain BED34_06065 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site BED34_06065 IPR000883 Cytochrome c oxidase subunit I BED34_06065 IPR036927 Cytochrome c oxidase-like, subunit I superfamily BED34_06065 IPR023616 Cytochrome c oxidase-like, subunit I domain BED34_06065 IPR014207 Cytochrome o ubiquinol oxidase, subunit I BED34_06070 IPR010514 COX aromatic rich motif BED34_06070 IPR002429 Cytochrome c oxidase subunit II-like C-terminal BED34_06070 IPR034227 Ubiquinol oxidase subunit 2, cupredoxin domain BED34_06070 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain BED34_06070 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily BED34_06070 IPR006333 Cytochrome o ubiquinol oxidase subunit II BED34_06070 IPR008972 Cupredoxin BED34_06075 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like BED34_06075 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily BED34_06080 IPR036259 MFS transporter superfamily BED34_06080 IPR020846 Major facilitator superfamily domain BED34_06080 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 BED34_06080 IPR011701 Major facilitator superfamily BED34_06085 IPR005619 Uncharacterised protein family, YajG BED34_06085 IPR012640 Membrane lipoprotein, lipid attachment site BED34_06090 IPR036065 BolA-like superfamily BED34_06090 IPR002634 BolA protein BED34_06100 IPR036611 Trigger factor ribosome-binding domain superfamily BED34_06100 IPR027304 Trigger factor/SurA domain superfamily BED34_06100 IPR008881 Trigger factor, ribosome-binding, bacterial BED34_06100 IPR037041 Trigger factor, C-terminal domain superfamily BED34_06100 IPR008880 Trigger factor, C-terminal BED34_06100 IPR005215 Trigger factor BED34_06100 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain BED34_06105 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA BED34_06105 IPR018215 ClpP, Ser active site BED34_06105 IPR001907 ATP-dependent Clp protease proteolytic subunit BED34_06105 IPR029045 ClpP/crotonase-like domain superfamily BED34_06105 IPR033135 ClpP, histidine active site BED34_06110 IPR038366 Zinc finger, ClpX C4-type superfamily BED34_06110 IPR003593 AAA+ ATPase domain BED34_06110 IPR003959 ATPase, AAA-type, core BED34_06110 IPR019489 Clp ATPase, C-terminal BED34_06110 IPR004487 Clp protease, ATP-binding subunit ClpX BED34_06110 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_06110 IPR010603 Zinc finger, ClpX C4-type BED34_06115 IPR027543 Lon protease, bacterial BED34_06115 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BED34_06115 IPR020568 Ribosomal protein S5 domain 2-type fold BED34_06115 IPR015947 PUA-like superfamily BED34_06115 IPR008268 Peptidase S16, active site BED34_06115 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_06115 IPR003111 Lon, substrate-binding domain BED34_06115 IPR008269 Peptidase S16, Lon proteolytic domain BED34_06115 IPR004815 Lon protease, bacterial/eukaryotic-type BED34_06115 IPR003959 ATPase, AAA-type, core BED34_06115 IPR027065 Lon protease BED34_06115 IPR003593 AAA+ ATPase domain BED34_06120 IPR000119 Histone-like DNA-binding protein BED34_06120 IPR020816 Histone-like DNA-binding protein, conserved site BED34_06120 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily BED34_06125 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type BED34_06125 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site BED34_06125 IPR027304 Trigger factor/SurA domain superfamily BED34_06130 IPR010994 RuvA domain 2-like BED34_06130 IPR004509 Competence protein ComEA, helix-hairpin-helix domain BED34_06135 IPR029069 HotDog domain superfamily BED34_06135 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family BED34_06140 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED34_06140 IPR018317 Queuosine biosynthesis protein QueC BED34_06145 IPR039424 Solute-binding protein family 5 BED34_06145 IPR000914 Solute-binding protein family 5 domain BED34_06145 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain BED34_06150 IPR036412 HAD-like superfamily BED34_06150 IPR006379 HAD-superfamily hydrolase, subfamily IIB BED34_06150 IPR023214 HAD superfamily BED34_06150 IPR023938 HMP-PP phosphatase BED34_06150 IPR000150 Cof family BED34_06160 IPR019885 Transcription regulator HTH, AsnC-type, conserved site BED34_06160 IPR011991 ArsR-like helix-turn-helix domain BED34_06160 IPR000485 AsnC-type HTH domain BED34_06160 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_06160 IPR019888 Transcription regulator AsnC-type BED34_06160 IPR036390 Winged helix DNA-binding domain superfamily BED34_06160 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain BED34_06160 IPR011008 Dimeric alpha-beta barrel BED34_06165 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_06165 IPR039421 Type I protein exporter BED34_06165 IPR003439 ABC transporter-like BED34_06165 IPR017871 ABC transporter, conserved site BED34_06165 IPR011527 ABC transporter type 1, transmembrane domain BED34_06165 IPR003593 AAA+ ATPase domain BED34_06165 IPR036640 ABC transporter type 1, transmembrane domain superfamily BED34_06170 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_06170 IPR017871 ABC transporter, conserved site BED34_06170 IPR036640 ABC transporter type 1, transmembrane domain superfamily BED34_06170 IPR003593 AAA+ ATPase domain BED34_06170 IPR011527 ABC transporter type 1, transmembrane domain BED34_06170 IPR003439 ABC transporter-like BED34_06170 IPR039421 Type I protein exporter BED34_06175 IPR002187 Nitrogen regulatory protein PII BED34_06175 IPR011322 Nitrogen regulatory PII-like, alpha/beta BED34_06175 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BED34_06175 IPR017918 Nitrogen regulatory protein PII, conserved site BED34_06175 IPR002332 Nitrogen regulatory protein P-II, urydylation site BED34_06180 IPR024041 Ammonium transporter AmtB-like domain BED34_06180 IPR018047 Ammonium transporter, conserved site BED34_06180 IPR001905 Ammonium transporter BED34_06180 IPR029020 Ammonium/urea transporter BED34_06185 IPR029069 HotDog domain superfamily BED34_06185 IPR003703 Acyl-CoA thioesterase BED34_06190 IPR039366 YscW/ExsB BED34_06195 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_06195 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain BED34_06195 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding BED34_06205 IPR007985 Haemolysin expression modulating, HHA BED34_06205 IPR036666 HHA superfamily BED34_06210 IPR019693 Biofilm formation regulator YbaJ BED34_06220 IPR003593 AAA+ ATPase domain BED34_06220 IPR017871 ABC transporter, conserved site BED34_06220 IPR003439 ABC transporter-like BED34_06220 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_06225 IPR001626 ABC transporter, TroCD-like BED34_06225 IPR037294 ABC transporter, BtuC-like BED34_06230 IPR006128 Adhesion lipoprotein BED34_06230 IPR006127 Periplasmic solute binding protein, ZnuA-like BED34_06230 IPR006129 Adhesin B BED34_06235 IPR035977 Ribosomal protein L36 superfamily BED34_06235 IPR000473 Ribosomal protein L36 BED34_06240 IPR027493 Ribosomal protein L31 type B BED34_06240 IPR034704 L28p-like BED34_06240 IPR002150 Ribosomal protein L31 BED34_06240 IPR042105 Ribosomal protein L31 superfamily BED34_06245 IPR019733 Uncharacterised protein family YhfT BED34_06250 IPR021238 Protein of unknown function DUF2620 BED34_06255 IPR010045 Phosphopentomutase BED34_06255 IPR024052 Phosphopentomutase DeoB cap domain superfamily BED34_06255 IPR017850 Alkaline-phosphatase-like, core domain superfamily BED34_06255 IPR006124 Metalloenzyme BED34_06260 IPR029066 PLP-binding barrel BED34_06260 IPR001608 Alanine racemase, N-terminal BED34_06270 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 BED34_06270 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BED34_06270 IPR001036 Acriflavin resistance protein BED34_06275 IPR006143 RND efflux pump, membrane fusion protein BED34_06275 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BED34_06280 IPR013572 Transcription regulator MAATS, C-terminal BED34_06280 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BED34_06280 IPR001647 DNA-binding HTH domain, TetR-type BED34_06280 IPR009057 Homeobox-like domain superfamily BED34_06280 IPR023772 DNA-binding HTH domain, TetR-type, conserved site BED34_06285 IPR027396 DsrEFH-like BED34_06285 IPR003787 Sulphur relay, DsrE/F-like protein BED34_06295 IPR019630 Protein of unknown function DUF2496, YbaM-related BED34_06305 IPR007401 Protein of unknown function DUF454 BED34_06310 IPR029057 Phosphoribosyltransferase-like BED34_06310 IPR000836 Phosphoribosyltransferase domain BED34_06310 IPR005764 Adenine phosphoribosyl transferase BED34_06315 IPR012763 DNA polymerase III, subunit gamma/ tau BED34_06315 IPR022754 DNA polymerase III, gamma subunit, domain III BED34_06315 IPR021029 DNA polymerase III, tau subunit, domain V BED34_06315 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_06315 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily BED34_06315 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV BED34_06315 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal BED34_06315 IPR001270 ClpA/B family BED34_06315 IPR003593 AAA+ ATPase domain BED34_06320 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily BED34_06320 IPR004401 Nucleoid-associated protein YbaB/EbfC family BED34_06325 IPR015967 Recombination protein RecR, conserved site BED34_06325 IPR034137 RecR, TOPRIM domain BED34_06325 IPR006171 TOPRIM domain BED34_06325 IPR023628 Recombination protein RecR, C4-type zinc finger BED34_06325 IPR023627 Recombination protein RecR BED34_06325 IPR000093 DNA recombination protein RecR BED34_06330 IPR019805 Heat shock protein Hsp90, conserved site BED34_06330 IPR037196 HSP90, C-terminal domain BED34_06330 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BED34_06330 IPR001404 Heat shock protein Hsp90 family BED34_06330 IPR020575 Heat shock protein Hsp90, N-terminal BED34_06330 IPR020568 Ribosomal protein S5 domain 2-type fold BED34_06330 IPR003594 Histidine kinase/HSP90-like ATPase BED34_06335 IPR006259 Adenylate kinase subfamily BED34_06335 IPR000850 Adenylate kinase/UMP-CMP kinase BED34_06335 IPR033690 Adenylate kinase, conserved site BED34_06335 IPR007862 Adenylate kinase, active site lid domain BED34_06335 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_06340 IPR033659 Ferrochelatase, N-terminal BED34_06340 IPR033644 Ferrochelatase, C-terminal BED34_06340 IPR019772 Ferrochelatase, active site BED34_06340 IPR001015 Ferrochelatase BED34_06350 IPR001173 Glycosyltransferase 2-like BED34_06350 IPR002495 Glycosyl transferase, family 8 BED34_06350 IPR029044 Nucleotide-diphospho-sugar transferases BED34_06355 IPR001173 Glycosyltransferase 2-like BED34_06355 IPR029044 Nucleotide-diphospho-sugar transferases BED34_06360 IPR001296 Glycosyl transferase, family 1 BED34_06360 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain BED34_06365 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain BED34_06365 IPR001296 Glycosyl transferase, family 1 BED34_06370 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site BED34_06370 IPR000715 Glycosyl transferase, family 4 BED34_06375 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED34_06375 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain BED34_06375 IPR036291 NAD(P)-binding domain superfamily BED34_06380 IPR001296 Glycosyl transferase, family 1 BED34_06380 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain BED34_06385 IPR016040 NAD(P)-binding domain BED34_06385 IPR036291 NAD(P)-binding domain superfamily BED34_06385 IPR005886 UDP-glucose 4-epimerase BED34_06390 IPR029056 Ribokinase-like BED34_06390 IPR011611 Carbohydrate kinase PfkB BED34_06390 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site BED34_06395 IPR038770 Sodium/solute symporter superfamily BED34_06395 IPR003148 Regulator of K+ conductance, N-terminal BED34_06395 IPR006153 Cation/H+ exchanger BED34_06395 IPR036291 NAD(P)-binding domain superfamily BED34_06395 IPR004771 K+/H+ exchanger BED34_06400 IPR036259 MFS transporter superfamily BED34_06400 IPR011701 Major facilitator superfamily BED34_06400 IPR020846 Major facilitator superfamily domain BED34_06415 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC BED34_06415 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily BED34_06415 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain BED34_06420 IPR002816 TraB family BED34_06425 IPR036163 Heavy metal-associated domain superfamily BED34_06425 IPR006121 Heavy metal-associated domain, HMA BED34_06425 IPR023299 P-type ATPase, cytoplasmic domain N BED34_06425 IPR001757 P-type ATPase BED34_06425 IPR023214 HAD superfamily BED34_06425 IPR036412 HAD-like superfamily BED34_06425 IPR023298 P-type ATPase, transmembrane domain superfamily BED34_06425 IPR027256 P-type ATPase, subfamily IB BED34_06425 IPR017969 Heavy-metal-associated, conserved site BED34_06425 IPR008250 P-type ATPase, A domain superfamily BED34_06425 IPR018303 P-type ATPase, phosphorylation site BED34_06430 IPR000551 MerR-type HTH domain BED34_06430 IPR009061 Putative DNA-binding domain superfamily BED34_06430 IPR011789 Cu(I)-responsive transcriptional regulator BED34_06435 IPR002810 NfeD-like, C-terminal domain BED34_06440 IPR001107 Band 7 domain BED34_06440 IPR036013 Band 7/SPFH domain superfamily BED34_06440 IPR018080 Band 7/stomatin-like, conserved site BED34_06440 IPR032435 Band 7, C-terminal extension BED34_06440 IPR001972 Stomatin family BED34_06445 IPR036249 Thioredoxin-like superfamily BED34_06445 IPR011990 Tetratricopeptide-like helical domain superfamily BED34_06445 IPR013766 Thioredoxin domain BED34_06450 IPR002347 Short-chain dehydrogenase/reductase SDR BED34_06450 IPR020904 Short-chain dehydrogenase/reductase, conserved site BED34_06450 IPR036291 NAD(P)-binding domain superfamily BED34_06455 IPR036514 SGNH hydrolase superfamily BED34_06455 IPR013830 SGNH hydrolase-type esterase domain BED34_06455 IPR008265 Lipase, GDSL, active site BED34_06460 IPR017871 ABC transporter, conserved site BED34_06460 IPR003439 ABC transporter-like BED34_06460 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_06460 IPR003593 AAA+ ATPase domain BED34_06465 IPR038766 Membrane component of ABC transporter, predicted BED34_06470 IPR016185 Pre-ATP-grasp domain superfamily BED34_06470 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain BED34_06470 IPR011054 Rudiment single hybrid motif BED34_06470 IPR013815 ATP-grasp fold, subdomain 1 BED34_06470 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit BED34_06470 IPR011761 ATP-grasp fold BED34_06470 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type BED34_06475 IPR024694 PurE, prokaryotic type BED34_06475 IPR000031 PurE domain BED34_06475 IPR035893 PurE domain superfamily BED34_06475 IPR033747 Class I PurE BED34_06480 IPR029052 Metallo-dependent phosphatase-like BED34_06480 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type BED34_06480 IPR010138 UDP-2,3-diacylglucosamine hydrolase BED34_06485 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase BED34_06485 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site BED34_06485 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain BED34_06485 IPR029000 Cyclophilin-like domain superfamily BED34_06490 IPR032678 tRNA synthetases class I, catalytic domain BED34_06490 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR BED34_06490 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding BED34_06490 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase BED34_06490 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED34_06490 IPR015803 Cysteine-tRNA ligase BED34_06495 IPR036986 RNA-binding S4 domain superfamily BED34_06495 IPR002942 RNA-binding S4 domain BED34_06500 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase BED34_06500 IPR036291 NAD(P)-binding domain superfamily BED34_06500 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BED34_06500 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BED34_06500 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site BED34_06510 IPR002104 Integrase, catalytic domain BED34_06510 IPR013762 Integrase-like, catalytic domain superfamily BED34_06510 IPR011010 DNA breaking-rejoining enzyme, catalytic core BED34_06510 IPR010998 Integrase/recombinase, N-terminal BED34_06515 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED34_06515 IPR002052 DNA methylase, N-6 adenine-specific, conserved site BED34_06515 IPR007757 MT-A70-like BED34_06560 IPR024432 Putative exodeoxyribonuclease 8, PDDEXK-like domain BED34_06560 IPR010584 Exodeoxyribonuclease 8 BED34_06625 IPR002611 IstB-like ATP-binding protein BED34_06625 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein BED34_06625 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_06660 IPR010774 Protein of unknown function DUF1364 BED34_06665 IPR008822 Holliday junction resolvase RusA-like BED34_06665 IPR016281 Crossover junction endodeoxyribonuclease, RusA BED34_06665 IPR036614 Holliday junction resolvase RusA-like superfamily BED34_06710 IPR036745 DNA polymerase III-theta superfamily BED34_06710 IPR009052 DNA polymerase III-theta, bacterial BED34_06785 IPR035089 Tail sheath protein, subtilisin-like domain BED34_06785 IPR020287 Tail sheath protein, C-terminal domain BED34_06785 IPR007067 Tail sheath protein BED34_06845 IPR002656 Acyltransferase 3 BED34_06845 IPR036514 SGNH hydrolase superfamily BED34_06850 IPR011010 DNA breaking-rejoining enzyme, catalytic core BED34_06850 IPR010998 Integrase/recombinase, N-terminal BED34_06850 IPR013762 Integrase-like, catalytic domain superfamily BED34_06850 IPR002104 Integrase, catalytic domain BED34_06855 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED34_06855 IPR007757 MT-A70-like BED34_06855 IPR002052 DNA methylase, N-6 adenine-specific, conserved site BED34_06950 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BED34_06950 IPR015927 Peptidase S24/S26A/S26B/S26C BED34_06950 IPR036286 LexA/Signal peptidase-like superfamily BED34_06950 IPR001387 Cro/C1-type helix-turn-helix domain BED34_06950 IPR039418 LexA-like BED34_06975 IPR007694 DNA helicase, DnaB-like, C-terminal BED34_06975 IPR007692 DNA helicase, DnaB type BED34_06975 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal BED34_06975 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_06975 IPR007693 DNA helicase, DnaB-like, N-terminal BED34_06975 IPR003593 AAA+ ATPase domain BED34_06975 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily BED34_07025 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type BED34_07025 IPR029052 Metallo-dependent phosphatase-like BED34_07025 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase BED34_07065 IPR002196 Glycoside hydrolase, family 24 BED34_07065 IPR034690 Endolysin T4 type BED34_07065 IPR023346 Lysozyme-like domain superfamily BED34_07070 IPR004929 Spanin, inner membrane subunit BED34_07230 IPR038488 Integrase, DNA-binding domain superfamily BED34_07230 IPR010998 Integrase/recombinase, N-terminal BED34_07230 IPR002104 Integrase, catalytic domain BED34_07230 IPR025166 Integrase, DNA-binding domain BED34_07230 IPR013762 Integrase-like, catalytic domain superfamily BED34_07230 IPR011010 DNA breaking-rejoining enzyme, catalytic core BED34_07230 IPR004107 Integrase, SAM-like, N-terminal BED34_07235 IPR025166 Integrase, DNA-binding domain BED34_07235 IPR038488 Integrase, DNA-binding domain superfamily BED34_07235 IPR002104 Integrase, catalytic domain BED34_07235 IPR010998 Integrase/recombinase, N-terminal BED34_07235 IPR011010 DNA breaking-rejoining enzyme, catalytic core BED34_07235 IPR004107 Integrase, SAM-like, N-terminal BED34_07235 IPR013762 Integrase-like, catalytic domain superfamily BED34_07240 IPR010998 Integrase/recombinase, N-terminal BED34_07240 IPR038488 Integrase, DNA-binding domain superfamily BED34_07240 IPR011010 DNA breaking-rejoining enzyme, catalytic core BED34_07240 IPR002104 Integrase, catalytic domain BED34_07240 IPR013762 Integrase-like, catalytic domain superfamily BED34_07240 IPR004107 Integrase, SAM-like, N-terminal BED34_07240 IPR025166 Integrase, DNA-binding domain BED34_07255 IPR026287 Protein adenylyltransferase SoFic-like BED34_07255 IPR040198 Fido domain-containing protein BED34_07255 IPR036597 Fido-like domain superfamily BED34_07255 IPR025758 Fic/DOC N-terminal BED34_07255 IPR003812 Fido domain BED34_07310 IPR036286 LexA/Signal peptidase-like superfamily BED34_07310 IPR039418 LexA-like BED34_07310 IPR015927 Peptidase S24/S26A/S26B/S26C BED34_07310 IPR006197 Peptidase S24, LexA-like BED34_07320 IPR039420 Transcriptional regulatory protein WalR-like BED34_07320 IPR011006 CheY-like superfamily BED34_07320 IPR001867 OmpR/PhoB-type DNA-binding domain BED34_07320 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response BED34_07320 IPR001789 Signal transduction response regulator, receiver domain BED34_07320 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_07330 IPR003346 Transposase, IS116/IS110/IS902 BED34_07330 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED34_07340 IPR039994 JmjC domain-containing BED34_07340 IPR003347 JmjC domain BED34_07350 IPR002830 UbiD decarboxylyase family BED34_07350 IPR032903 UbiD-like decarboxylase/ferulic acid decarboxylase 1 BED34_07355 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_07355 IPR036640 ABC transporter type 1, transmembrane domain superfamily BED34_07355 IPR039421 Type I protein exporter BED34_07355 IPR017871 ABC transporter, conserved site BED34_07355 IPR003593 AAA+ ATPase domain BED34_07355 IPR003439 ABC transporter-like BED34_07355 IPR011527 ABC transporter type 1, transmembrane domain BED34_07370 IPR029052 Metallo-dependent phosphatase-like BED34_07370 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type BED34_07370 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase BED34_07385 IPR002059 Cold-shock protein, DNA-binding BED34_07385 IPR011129 Cold shock domain BED34_07385 IPR012156 Cold shock, CspA BED34_07385 IPR019844 Cold-shock (CSD) domain BED34_07385 IPR012340 Nucleic acid-binding, OB-fold BED34_07390 IPR012340 Nucleic acid-binding, OB-fold BED34_07390 IPR002059 Cold-shock protein, DNA-binding BED34_07390 IPR011129 Cold shock domain BED34_07390 IPR012156 Cold shock, CspA BED34_07390 IPR019844 Cold-shock (CSD) domain BED34_07395 IPR003691 Putative fluoride ion transporter CrcB BED34_07400 IPR000160 GGDEF domain BED34_07400 IPR007894 MASE2 BED34_07400 IPR029787 Nucleotide cyclase BED34_07405 IPR024905 Sec-independent protein translocase protein TatE BED34_07405 IPR006312 Sec-independent protein translocase protein TatA/E BED34_07405 IPR003369 Sec-independent protein translocase protein TatA/B/E BED34_07410 IPR006638 Elp3/MiaB/NifB BED34_07410 IPR013785 Aldolase-type TIM barrel BED34_07410 IPR031691 Lipoyl synthase, N-terminal BED34_07410 IPR003698 Lipoyl synthase BED34_07410 IPR007197 Radical SAM BED34_07415 IPR000544 Octanoyltransferase BED34_07415 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain BED34_07415 IPR020605 Octanoyltransferase, conserved site BED34_07420 IPR027471 YbeD-like domain superfamily BED34_07420 IPR007454 Uncharacterised protein family UPF0250 BED34_07425 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A BED34_07425 IPR015956 Penicillin-binding protein, C-terminal domain superfamily BED34_07425 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal BED34_07425 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily BED34_07425 IPR012338 Beta-lactamase/transpeptidase-like BED34_07425 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal BED34_07430 IPR009009 RlpA-like protein, double-psi beta-barrel domain BED34_07430 IPR036908 RlpA-like domain superfamily BED34_07430 IPR036680 Sporulation-like domain superfamily BED34_07430 IPR034718 Endolytic peptidoglycan transglycosylase RlpA BED34_07430 IPR012997 Rare lipoprotein A BED34_07430 IPR007730 Sporulation-like domain BED34_07435 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB BED34_07435 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA BED34_07435 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site BED34_07440 IPR012338 Beta-lactamase/transpeptidase-like BED34_07440 IPR001460 Penicillin-binding protein, transpeptidase BED34_07440 IPR036138 Penicillin-binding protein, dimerisation domain superfamily BED34_07440 IPR005311 Penicillin-binding protein, dimerisation domain BED34_07440 IPR017790 Penicillin-binding protein 2 BED34_07445 IPR029028 Alpha/beta knot methyltransferases BED34_07445 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BED34_07445 IPR003742 RNA methyltransferase RlmH BED34_07450 IPR004394 Protein Iojap/ribosomal silencing factor RsfS BED34_07455 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED34_07455 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase BED34_07455 IPR004821 Cytidyltransferase-like domain BED34_07460 IPR032780 DNA polymerase III subunit delta, C-terminal BED34_07460 IPR010372 DNA polymerase III delta, N-terminal BED34_07460 IPR005790 DNA polymerase III, delta subunit BED34_07460 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_07460 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal BED34_07465 IPR007485 LPS-assembly lipoprotein LptE BED34_07470 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding BED34_07470 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site BED34_07470 IPR002300 Aminoacyl-tRNA synthetase, class Ia BED34_07470 IPR002302 Leucine-tRNA ligase BED34_07470 IPR025709 Leucyl-tRNA synthetase, editing domain BED34_07470 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding BED34_07470 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED34_07470 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain BED34_07475 IPR009912 Zinc-ribbon containing domain BED34_07480 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type BED34_07480 IPR003439 ABC transporter-like BED34_07480 IPR003593 AAA+ ATPase domain BED34_07480 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_07480 IPR017871 ABC transporter, conserved site BED34_07485 IPR030205 Glutamate/aspartate transport system permease protein GltK/AatM BED34_07485 IPR035906 MetI-like superfamily BED34_07485 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain BED34_07485 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED34_07490 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain BED34_07490 IPR030202 Glutamate/aspartate transport system permease protein GltJ/AatQ BED34_07490 IPR035906 MetI-like superfamily BED34_07490 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED34_07495 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BED34_07505 IPR004563 Apolipoprotein N-acyltransferase BED34_07505 IPR036526 Carbon-nitrogen hydrolase superfamily BED34_07505 IPR003010 Carbon-nitrogen hydrolase BED34_07510 IPR000644 CBS domain BED34_07510 IPR036318 FAD-binding, type PCMH-like superfamily BED34_07510 IPR016169 FAD-binding, type PCMH, subdomain 2 BED34_07510 IPR005170 Transporter-associated domain BED34_07520 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_07520 IPR003714 PhoH-like protein BED34_07525 IPR002792 TRAM domain BED34_07525 IPR007197 Radical SAM BED34_07525 IPR038135 Methylthiotransferase, N-terminal domain superfamily BED34_07525 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB BED34_07525 IPR020612 Methylthiotransferase, conserved site BED34_07525 IPR013848 Methylthiotransferase, N-terminal BED34_07525 IPR006638 Elp3/MiaB/NifB BED34_07525 IPR005839 Methylthiotransferase BED34_07525 IPR023404 Radical SAM, alpha/beta horseshoe BED34_07530 IPR002938 FAD-binding domain BED34_07530 IPR036188 FAD/NAD(P)-binding domain superfamily BED34_07530 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site BED34_07530 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 BED34_07565 IPR017932 Glutamine amidotransferase type 2 domain BED34_07565 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED34_07565 IPR029055 Nucleophile aminohydrolases, N-terminal BED34_07565 IPR006426 Asparagine synthase, glutamine-hydrolyzing BED34_07565 IPR001962 Asparagine synthase BED34_07565 IPR033738 Asparagine synthase, N-terminal domain BED34_07570 IPR036412 HAD-like superfamily BED34_07570 IPR006357 HAD-superfamily hydrolase, subfamily IIA BED34_07570 IPR023214 HAD superfamily BED34_07575 IPR000600 ROK family BED34_07575 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_07575 IPR036390 Winged helix DNA-binding domain superfamily BED34_07575 IPR000835 MarR-type HTH domain BED34_07580 IPR011059 Metal-dependent hydrolase, composite domain superfamily BED34_07580 IPR032466 Metal-dependent hydrolase BED34_07580 IPR003764 N-acetylglucosamine-6-phosphate deacetylase BED34_07580 IPR006680 Amidohydrolase-related BED34_07585 IPR018321 Glucosamine-6-phosphate isomerase, conserved site BED34_07585 IPR004547 Glucosamine-6-phosphate isomerase BED34_07585 IPR037171 NagB/RpiA transferase-like BED34_07585 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase BED34_07595 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain BED34_07595 IPR022861 Glutamine-tRNA ligase, bacterial BED34_07595 IPR000924 Glutamyl/glutaminyl-tRNA synthetase BED34_07595 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain BED34_07595 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site BED34_07595 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily BED34_07595 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED34_07595 IPR004514 Glutamine-tRNA synthetase BED34_07595 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily BED34_07595 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal BED34_07600 IPR005318 Outer membrane porin, bacterial BED34_07600 IPR023614 Porin domain superfamily BED34_07605 IPR025727 YbfN-like lipoprotein BED34_07610 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily BED34_07610 IPR017853 Glycoside hydrolase superfamily BED34_07610 IPR013783 Immunoglobulin-like fold BED34_07610 IPR015883 Glycoside hydrolase family 20, catalytic domain BED34_07610 IPR014756 Immunoglobulin E-set BED34_07610 IPR029018 Beta-hexosaminidase-like, domain 2 BED34_07610 IPR004867 Chitobiase C-terminal domain BED34_07610 IPR025705 Beta-hexosaminidase BED34_07610 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal BED34_07610 IPR012291 CBM2, carbohydrate-binding domain superfamily BED34_07610 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain BED34_07615 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_07615 IPR002481 Ferric-uptake regulator BED34_07615 IPR036390 Winged helix DNA-binding domain superfamily BED34_07620 IPR001226 Flavodoxin, conserved site BED34_07620 IPR029039 Flavoprotein-like superfamily BED34_07620 IPR008254 Flavodoxin/nitric oxide synthase BED34_07620 IPR010086 Flavodoxin, long chain BED34_07625 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BED34_07625 IPR003660 HAMP domain BED34_07625 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site BED34_07625 IPR004090 Chemotaxis methyl-accepting receptor BED34_07625 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily BED34_07625 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding BED34_07630 IPR002145 Ribbon-helix-helix protein, CopG BED34_07630 IPR010985 Ribbon-helix-helix BED34_07635 IPR029058 Alpha/Beta hydrolase fold BED34_07635 IPR000073 Alpha/beta hydrolase fold-1 BED34_07640 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal BED34_07640 IPR013321 Arc-type ribbon-helix-helix BED34_07640 IPR010985 Ribbon-helix-helix BED34_07640 IPR005621 Negative modulator of initiation of replication SeqA BED34_07640 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain BED34_07640 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily BED34_07645 IPR016066 Alpha-D-phosphohexomutase, conserved site BED34_07645 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II BED34_07645 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III BED34_07645 IPR005843 Alpha-D-phosphohexomutase, C-terminal BED34_07645 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III BED34_07645 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily BED34_07645 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I BED34_07645 IPR005852 Phosphoglucomutase, alpha-D-glucose specific BED34_07655 IPR000620 EamA domain BED34_07660 IPR039420 Transcriptional regulatory protein WalR-like BED34_07660 IPR011006 CheY-like superfamily BED34_07660 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_07660 IPR001789 Signal transduction response regulator, receiver domain BED34_07660 IPR001867 OmpR/PhoB-type DNA-binding domain BED34_07670 IPR003820 Potassium-transporting ATPase C chain BED34_07675 IPR018303 P-type ATPase, phosphorylation site BED34_07675 IPR023299 P-type ATPase, cytoplasmic domain N BED34_07675 IPR001757 P-type ATPase BED34_07675 IPR006391 P-type ATPase, B chain, subfamily IA BED34_07675 IPR036412 HAD-like superfamily BED34_07675 IPR023298 P-type ATPase, transmembrane domain superfamily BED34_07675 IPR008250 P-type ATPase, A domain superfamily BED34_07680 IPR004623 Potassium-transporting ATPase A chain BED34_07685 IPR011726 K+ transporting P-type ATPase, F subunit BED34_07690 IPR019663 Uncharacterised protein YbfA BED34_07700 IPR003996 RTX toxin-activating protein C, bacteria BED34_07710 IPR013560 Domain of unknown function DUF1722 BED34_07715 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily BED34_07715 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily BED34_07715 IPR006050 DNA photolyase, N-terminal BED34_07715 IPR002081 Cryptochrome/DNA photolyase class 1 BED34_07715 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal BED34_07715 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED34_07715 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain BED34_07720 IPR024225 Cyclic-AMP phosphodiesterase class-II, conserved site BED34_07720 IPR000396 Cyclic-AMP phosphodiesterase, class-II BED34_07720 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BED34_07725 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 BED34_07725 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily BED34_07730 IPR010016 KipI family BED34_07730 IPR003833 Carboxyltransferase domain, subdomain C and D BED34_07730 IPR029000 Cyclophilin-like domain superfamily BED34_07735 IPR003778 Carboxyltransferase domain, subdomain A and B BED34_07735 IPR029000 Cyclophilin-like domain superfamily BED34_07740 IPR005501 LamB/YcsF/PxpA-like BED34_07740 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel BED34_07755 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like BED34_07755 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily BED34_07755 IPR033693 Pyroglutamyl peptidase I, Glu active site BED34_07755 IPR033694 Pyroglutamyl peptidase I, Cys active site BED34_07755 IPR029762 Pyroglutamyl peptidase I, bacterial-type BED34_07755 IPR000816 Peptidase C15, pyroglutamyl peptidase I BED34_07760 IPR024176 Citrate synthase, bacterial-type BED34_07760 IPR019810 Citrate synthase active site BED34_07760 IPR002020 Citrate synthase BED34_07760 IPR036969 Citrate synthase superfamily BED34_07760 IPR016143 Citrate synthase-like, small alpha subdomain BED34_07760 IPR010953 Citrate synthase, type I BED34_07760 IPR016142 Citrate synthase-like, large alpha subdomain BED34_07765 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site BED34_07765 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit BED34_07765 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit BED34_07765 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit BED34_07770 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit BED34_07770 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit BED34_07770 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor BED34_07775 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit BED34_07775 IPR011281 Succinate dehydrogenase, flavoprotein subunit BED34_07775 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily BED34_07775 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal BED34_07775 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site BED34_07775 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily BED34_07775 IPR036188 FAD/NAD(P)-binding domain superfamily BED34_07775 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain BED34_07780 IPR036010 2Fe-2S ferredoxin-like superfamily BED34_07780 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BED34_07780 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BED34_07780 IPR012675 Beta-grasp domain superfamily BED34_07780 IPR009051 Alpha-helical ferredoxin BED34_07780 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein BED34_07780 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain BED34_07780 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal BED34_07785 IPR029061 Thiamin diphosphate-binding fold BED34_07785 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily BED34_07785 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain BED34_07785 IPR001017 Dehydrogenase, E1 component BED34_07785 IPR011603 2-oxoglutarate dehydrogenase E1 component BED34_07785 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal BED34_07785 IPR005475 Transketolase-like, pyrimidine-binding domain BED34_07790 IPR011053 Single hybrid motif BED34_07790 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site BED34_07790 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain BED34_07790 IPR000089 Biotin/lipoyl attachment BED34_07790 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily BED34_07790 IPR036625 E3-binding domain superfamily BED34_07790 IPR006255 Dihydrolipoamide succinyltransferase BED34_07790 IPR004167 Peripheral subunit-binding domain BED34_07795 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type BED34_07795 IPR011761 ATP-grasp fold BED34_07795 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site BED34_07795 IPR005809 Succinate--CoA synthetase, beta subunit BED34_07795 IPR005811 ATP-citrate lyase/succinyl-CoA ligase BED34_07795 IPR013815 ATP-grasp fold, subdomain 1 BED34_07795 IPR016102 Succinyl-CoA synthetase-like BED34_07800 IPR003781 CoA-binding BED34_07800 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site BED34_07800 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site BED34_07800 IPR005810 Succinyl-CoA ligase, alpha subunit BED34_07800 IPR005811 ATP-citrate lyase/succinyl-CoA ligase BED34_07800 IPR036291 NAD(P)-binding domain superfamily BED34_07800 IPR016102 Succinyl-CoA synthetase-like BED34_07805 IPR029052 Metallo-dependent phosphatase-like BED34_07805 IPR041827 CpdB, N-terminal metallophosphatase domain BED34_07805 IPR008334 5'-Nucleotidase, C-terminal BED34_07805 IPR036907 5'-Nucleotidase, C-terminal domain superfamily BED34_07805 IPR006146 5'-Nucleotidase, conserved site BED34_07805 IPR006179 5'-Nucleotidase/apyrase BED34_07805 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type BED34_07805 IPR019931 LPXTG cell wall anchor domain BED34_07810 IPR002585 Cytochrome ubiquinol oxidase subunit 1 BED34_07815 IPR003317 Cytochrome ubiquinol oxidase subunit 2 BED34_07820 IPR011724 Cyd operon protein YbgT BED34_07820 IPR012994 Membrane bound YbgT-like BED34_07825 IPR011846 Cyd operon protein YbgE BED34_07830 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site BED34_07830 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family BED34_07830 IPR029069 HotDog domain superfamily BED34_07830 IPR006683 Thioesterase domain BED34_07830 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase BED34_07835 IPR002898 MotA/TolQ/ExbB proton channel BED34_07835 IPR014163 Tol-Pal system, TolQ BED34_07840 IPR003400 Biopolymer transport protein ExbD/TolR BED34_07840 IPR014168 Tol-Pal system protein TolR BED34_07845 IPR014161 Tol-Pal system, TolA BED34_07845 IPR014161 Tol-Pal system, TolA BED34_07850 IPR011042 Six-bladed beta-propeller, TolB-like BED34_07850 IPR014167 Tol-Pal system protein TolB BED34_07850 IPR007195 TolB, N-terminal BED34_07850 IPR036752 TolB, N-terminal domain superfamily BED34_07850 IPR011659 WD40-like Beta Propeller BED34_07855 IPR036737 OmpA-like domain superfamily BED34_07855 IPR006664 Outer membrane protein, bacterial BED34_07855 IPR006665 OmpA-like domain BED34_07855 IPR039001 Peptidoglycan-associated lipoprotein BED34_07855 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal BED34_07855 IPR006690 Outer membrane protein, OmpA-like, conserved site BED34_07860 IPR034706 Cell division coordinator CpoB BED34_07860 IPR014162 Cell division coordinator CpoB, C-terminal BED34_07860 IPR013026 Tetratricopeptide repeat-containing domain BED34_07860 IPR019734 Tetratricopeptide repeat BED34_07860 IPR032519 YbgF, trimerisation domain BED34_07860 IPR011990 Tetratricopeptide-like helical domain superfamily BED34_07885 IPR023513 Quinolinate synthase A, type 1 BED34_07885 IPR036094 Quinolinate synthetase A superfamily BED34_07885 IPR003473 Quinolinate synthetase A BED34_07890 IPR006419 Nicotinamide mononucleotide transporter PnuC BED34_07895 IPR027469 Cation efflux transmembrane domain superfamily BED34_07895 IPR036837 Cation efflux protein, cytoplasmic domain superfamily BED34_07895 IPR023500 Zinc transporter ZitB BED34_07895 IPR002524 Cation efflux protein BED34_07900 IPR006219 DHAP synthase, class 1 BED34_07900 IPR006218 DAHP synthetase I/KDSA BED34_07900 IPR013785 Aldolase-type TIM barrel BED34_07905 IPR013078 Histidine phosphatase superfamily, clade-1 BED34_07905 IPR029033 Histidine phosphatase superfamily BED34_07905 IPR005952 Phosphoglycerate mutase 1 BED34_07905 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site BED34_07910 IPR040255 Non-specific endonuclease BED34_07910 IPR020821 Extracellular Endonuclease, subunit A BED34_07910 IPR001604 DNA/RNA non-specific endonuclease BED34_07910 IPR018524 DNA/RNA non-specific endonuclease, active site BED34_07930 IPR018052 Aldose 1-epimerase, conserved site BED34_07930 IPR015443 Aldose 1-epimerase BED34_07930 IPR011013 Galactose mutarotase-like domain superfamily BED34_07930 IPR013458 Aldose 1-epimerase, bacterial BED34_07930 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase BED34_07930 IPR014718 Glycoside hydrolase-type carbohydrate-binding BED34_07935 IPR013750 GHMP kinase, C-terminal domain BED34_07935 IPR006203 GHMP kinase, ATP-binding, conserved site BED34_07935 IPR006206 Mevalonate/galactokinase BED34_07935 IPR036554 GHMP kinase, C-terminal domain superfamily BED34_07935 IPR020568 Ribosomal protein S5 domain 2-type fold BED34_07935 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BED34_07935 IPR006204 GHMP kinase N-terminal domain BED34_07935 IPR019741 Galactokinase, conserved site BED34_07935 IPR019539 Galactokinase galactose-binding domain BED34_07935 IPR022963 Galactokinase, bacterial BED34_07935 IPR000705 Galactokinase BED34_07940 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site BED34_07940 IPR001937 Galactose-1-phosphate uridyl transferase, class I BED34_07940 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal BED34_07940 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal BED34_07940 IPR036265 HIT-like superfamily BED34_07945 IPR005886 UDP-glucose 4-epimerase BED34_07945 IPR016040 NAD(P)-binding domain BED34_07945 IPR036291 NAD(P)-binding domain superfamily BED34_07955 IPR003593 AAA+ ATPase domain BED34_07955 IPR003439 ABC transporter-like BED34_07955 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_07960 IPR003725 Molybdenum-binding protein ModE, N-terminal BED34_07960 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_07960 IPR036390 Winged helix DNA-binding domain superfamily BED34_07960 IPR004606 Molybdenum-pterin binding BED34_07960 IPR016462 Molybdate-dependent transcriptional regulator ModE BED34_07960 IPR000847 Transcription regulator HTH, LysR BED34_07960 IPR008995 Molybdate/tungstate binding, C-terminal BED34_07960 IPR005116 Transport-associated OB, type 1 BED34_07965 IPR019702 Multidrug efflux pump accessory protein AcrZ BED34_07970 IPR005950 Molybdate ABC transporter, substrate-binding protein BED34_07975 IPR035906 MetI-like superfamily BED34_07975 IPR011867 Molybdate ABC transporter, permease protein BED34_07975 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED34_07980 IPR004606 Molybdenum-pterin binding BED34_07980 IPR011868 Molybdate ABC transporter, ATP-binding protein BED34_07980 IPR008995 Molybdate/tungstate binding, C-terminal BED34_07980 IPR015852 ABC transporter, molybdenum import, ModC BED34_07980 IPR017871 ABC transporter, conserved site BED34_07980 IPR003593 AAA+ ATPase domain BED34_07980 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_07980 IPR005116 Transport-associated OB, type 1 BED34_07980 IPR003439 ABC transporter-like BED34_07985 IPR036412 HAD-like superfamily BED34_07985 IPR023214 HAD superfamily BED34_07985 IPR000150 Cof family BED34_07985 IPR006379 HAD-superfamily hydrolase, subfamily IIB BED34_07990 IPR015943 WD40/YVTN repeat-like-containing domain superfamily BED34_07990 IPR011045 Nitrous oxide reductase, N-terminal BED34_07990 IPR022528 6-phosphogluconolactonase, YbhE-type BED34_07990 IPR019405 Lactonase, 7-bladed beta propeller BED34_07995 IPR005814 Aminotransferase class-III BED34_07995 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED34_07995 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA BED34_07995 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED34_07995 IPR015424 Pyridoxal phosphate-dependent transferase BED34_08000 IPR013785 Aldolase-type TIM barrel BED34_08000 IPR007197 Radical SAM BED34_08000 IPR024177 Biotin synthase BED34_08000 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB BED34_08000 IPR010722 Biotin and thiamin synthesis-associated domain BED34_08000 IPR006638 Elp3/MiaB/NifB BED34_08005 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED34_08005 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria BED34_08005 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED34_08005 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site BED34_08005 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type BED34_08005 IPR004839 Aminotransferase, class I/classII BED34_08005 IPR015424 Pyridoxal phosphate-dependent transferase BED34_08010 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC BED34_08010 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED34_08010 IPR013216 Methyltransferase type 11 BED34_08015 IPR004472 Dethiobiotin synthase BioD BED34_08015 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_08020 IPR003593 AAA+ ATPase domain BED34_08020 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type BED34_08020 IPR003439 ABC transporter-like BED34_08020 IPR017871 ABC transporter, conserved site BED34_08020 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_08025 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_08025 IPR001650 Helicase, C-terminal BED34_08025 IPR006935 Helicase/UvrB, N-terminal BED34_08025 IPR024759 UvrB, YAD/RRR-motif-containing domain BED34_08025 IPR014001 Helicase superfamily 1/2, ATP-binding domain BED34_08025 IPR004807 UvrABC system, subunit B BED34_08025 IPR036876 UVR domain superfamily BED34_08025 IPR001943 UVR domain BED34_08025 IPR041471 UvrB, interaction domain BED34_08030 IPR036361 SAP domain superfamily BED34_08030 IPR018668 DNA-binding protein VF530-like BED34_08035 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 BED34_08035 IPR010119 Gluconeogenesis factor BED34_08035 IPR038136 Gluconeogenesis factor superfamily BED34_08040 IPR006638 Elp3/MiaB/NifB BED34_08040 IPR007197 Radical SAM BED34_08040 IPR013483 Molybdenum cofactor biosynthesis protein A BED34_08040 IPR010505 Molybdenum cofactor synthesis C-terminal BED34_08040 IPR013785 Aldolase-type TIM barrel BED34_08040 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site BED34_08045 IPR023045 Molybdenum cofactor biosynthesis C BED34_08045 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain BED34_08045 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily BED34_08050 IPR003749 Sulfur carrier ThiS/MoaD-like BED34_08050 IPR012675 Beta-grasp domain superfamily BED34_08050 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp BED34_08055 IPR003448 Molybdopterin biosynthesis MoaE BED34_08055 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily BED34_08060 IPR006214 Bax inhibitor 1-related BED34_08065 IPR000412 ABC-2 transporter BED34_08070 IPR000412 ABC-2 transporter BED34_08075 IPR003439 ABC transporter-like BED34_08075 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_08075 IPR017871 ABC transporter, conserved site BED34_08075 IPR003593 AAA+ ATPase domain BED34_08080 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BED34_08080 IPR022936 Uncharacterised protein family UPF0194, membrane protein YbhG BED34_08085 IPR015292 Transcription regulator YbiH, C-terminal BED34_08085 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BED34_08085 IPR001647 DNA-binding HTH domain, TetR-type BED34_08085 IPR023772 DNA-binding HTH domain, TetR-type, conserved site BED34_08085 IPR009057 Homeobox-like domain superfamily BED34_08090 IPR011545 DEAD/DEAH box helicase domain BED34_08090 IPR028622 ATP-dependent RNA helicase RhlE BED34_08090 IPR014001 Helicase superfamily 1/2, ATP-binding domain BED34_08090 IPR001650 Helicase, C-terminal BED34_08090 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_08090 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site BED34_08090 IPR014014 RNA helicase, DEAD-box type, Q motif BED34_08095 IPR018517 tRNA-dihydrouridine synthase, conserved site BED34_08095 IPR013785 Aldolase-type TIM barrel BED34_08095 IPR001269 tRNA-dihydrouridine synthase BED34_08095 IPR035587 DUS-like, FMN-binding domain BED34_08095 IPR032886 tRNA-dihydrouridine(16) synthase BED34_08095 IPR042270 tRNA-dihydrouridine(16) synthase, C-terminal BED34_08105 IPR000644 CBS domain BED34_08105 IPR006667 SLC41 divalent cation transporters, integral membrane domain BED34_08105 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily BED34_08105 IPR038048 Magnesium transporter MgtE, transmembrane domain BED34_08105 IPR038076 MgtE, N-terminal domain superfamily BED34_08105 IPR006669 Magnesium transporter MgtE BED34_08105 IPR006668 Magnesium transporter, MgtE intracellular domain BED34_08110 IPR012338 Beta-lactamase/transpeptidase-like BED34_08110 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A BED34_08110 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal BED34_08115 IPR016166 FAD-binding domain, PCMH-type BED34_08115 IPR036318 FAD-binding, type PCMH-like superfamily BED34_08115 IPR016167 FAD-binding, type PCMH, subdomain 1 BED34_08115 IPR006094 FAD linked oxidase, N-terminal BED34_08115 IPR012256 D-lactate dehydrogenase BED34_08115 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 BED34_08115 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal BED34_08115 IPR016164 FAD-linked oxidase-like, C-terminal BED34_08115 IPR016169 FAD-binding, type PCMH, subdomain 2 BED34_08115 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 BED34_08120 IPR023577 CYTH domain BED34_08120 IPR033469 CYTH-like domain superfamily BED34_08120 IPR008173 Adenylyl cyclase CyaB BED34_08125 IPR003615 HNH nuclease BED34_08125 IPR002711 HNH endonuclease BED34_08135 IPR007341 Transglycosylase-associated protein BED34_08140 IPR012693 ABC transporter, phosphonate import, PhnC BED34_08140 IPR017871 ABC transporter, conserved site BED34_08140 IPR003593 AAA+ ATPase domain BED34_08140 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_08140 IPR003439 ABC transporter-like BED34_08145 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein BED34_08145 IPR017797 Phosphonate ABC transporter, substrate-binding protein BED34_08150 IPR035906 MetI-like superfamily BED34_08150 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED34_08150 IPR005769 ABC transporter, permease PhnE/PtxC BED34_08155 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED34_08155 IPR035906 MetI-like superfamily BED34_08155 IPR005769 ABC transporter, permease PhnE/PtxC BED34_08160 IPR009921 Domain of unknown function DUF1456 BED34_08170 IPR001851 ABC transporter, permease BED34_08175 IPR001851 ABC transporter, permease BED34_08180 IPR003439 ABC transporter-like BED34_08180 IPR017871 ABC transporter, conserved site BED34_08180 IPR012693 ABC transporter, phosphonate import, PhnC BED34_08180 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_08180 IPR003593 AAA+ ATPase domain BED34_08185 IPR003593 AAA+ ATPase domain BED34_08185 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein BED34_08185 IPR003439 ABC transporter-like BED34_08185 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_08185 IPR017871 ABC transporter, conserved site BED34_08190 IPR036873 Rhodanese-like domain superfamily BED34_08190 IPR001763 Rhodanese-like domain BED34_08190 IPR001307 Thiosulphate sulfurtransferase, conserved site BED34_08205 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain BED34_08215 IPR003439 ABC transporter-like BED34_08215 IPR017871 ABC transporter, conserved site BED34_08215 IPR003593 AAA+ ATPase domain BED34_08215 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_08220 IPR035906 MetI-like superfamily BED34_08220 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED34_08230 IPR002347 Short-chain dehydrogenase/reductase SDR BED34_08230 IPR036291 NAD(P)-binding domain superfamily BED34_08235 IPR000847 Transcription regulator HTH, LysR BED34_08235 IPR005119 LysR, substrate-binding BED34_08235 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_08235 IPR036390 Winged helix DNA-binding domain superfamily BED34_08245 IPR004779 Carboxylate/Amino Acid/Amine Transporter BED34_08245 IPR000620 EamA domain BED34_08255 IPR033900 Porin domain, Gram-negative type BED34_08255 IPR001702 Porin, Gram-negative type BED34_08255 IPR001897 Porin, gammaproteobacterial BED34_08255 IPR013793 Porin, Gram-negative type, conserved site BED34_08255 IPR023614 Porin domain superfamily BED34_08260 IPR014001 Helicase superfamily 1/2, ATP-binding domain BED34_08260 IPR010614 DEAD2 BED34_08260 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_08260 IPR001650 Helicase, C-terminal BED34_08260 IPR039000 ATP-dependent DNA helicase DinG BED34_08260 IPR006555 ATP-dependent helicase, C-terminal BED34_08260 IPR006554 Helicase-like, DEXD box c2 type BED34_08260 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type BED34_08265 IPR022357 Major intrinsic protein, conserved site BED34_08265 IPR023271 Aquaporin-like BED34_08265 IPR023743 Aquaporin Z BED34_08265 IPR034294 Aquaporin transporter BED34_08265 IPR000425 Major intrinsic protein BED34_08270 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily BED34_08270 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily BED34_08270 IPR017459 Glycosyl transferase family 3, N-terminal domain BED34_08290 IPR016909 Ribosomal RNA large subunit methyltransferase F BED34_08290 IPR010286 METTL16/RlmF family BED34_08290 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED34_08295 IPR004090 Chemotaxis methyl-accepting receptor BED34_08295 IPR013655 PAS fold-3 BED34_08295 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BED34_08295 IPR001610 PAC motif BED34_08295 IPR000014 PAS domain BED34_08295 IPR035965 PAS domain superfamily BED34_08295 IPR000700 PAS-associated, C-terminal BED34_08300 IPR003439 ABC transporter-like BED34_08300 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type BED34_08300 IPR017871 ABC transporter, conserved site BED34_08300 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_08300 IPR003593 AAA+ ATPase domain BED34_08305 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain BED34_08305 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED34_08305 IPR035906 MetI-like superfamily BED34_08310 IPR001320 Ionotropic glutamate receptor BED34_08310 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BED34_08310 IPR018313 Solute-binding protein family 3, conserved site BED34_08315 IPR020458 Zinc finger, DksA/TraR C4-type conserved site BED34_08315 IPR000962 Zinc finger, DksA/TraR C4-type BED34_08315 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria BED34_08320 IPR012347 Ferritin-like BED34_08320 IPR009078 Ferritin-like superfamily BED34_08320 IPR008331 Ferritin/DPS protein domain BED34_08320 IPR023188 DNA-binding protein Dps, conserved site BED34_08320 IPR002177 DNA-binding protein Dps BED34_08320 IPR023067 DNA protection during starvation protein, gammaproteobacteria BED34_08325 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED34_08325 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal BED34_08325 IPR023506 Trans-aconitate 2-methyltransferase BED34_08325 IPR025714 Methyltransferase domain BED34_08340 IPR000782 FAS1 domain BED34_08340 IPR036378 FAS1 domain superfamily BED34_08350 IPR000620 EamA domain BED34_08360 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel BED34_08360 IPR027385 Outer membrane protein beta-barrel domain BED34_08360 IPR000758 Virulence-related outer membrane protein BED34_08380 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_08380 IPR003439 ABC transporter-like BED34_08380 IPR032781 ABC-transporter extension domain BED34_08380 IPR003593 AAA+ ATPase domain BED34_08385 IPR003346 Transposase, IS116/IS110/IS902 BED34_08385 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED34_08390 IPR012730 Molybdopterin synthase sulfurylase MoeB BED34_08390 IPR000594 THIF-type NAD/FAD binding fold BED34_08390 IPR035985 Ubiquitin-activating enzyme BED34_08395 IPR036425 MoaB/Mog-like domain superfamily BED34_08395 IPR036135 MoeA, N-terminal and linker domain superfamily BED34_08395 IPR005110 MoeA, N-terminal and linker domain BED34_08395 IPR036688 MoeA, C-terminal, domain IV superfamily BED34_08395 IPR005111 MoeA, C-terminal, domain IV BED34_08395 IPR038987 Molybdopterin biosynthesis protein MoeA-like BED34_08395 IPR008284 Molybdenum cofactor biosynthesis, conserved site BED34_08395 IPR001453 MoaB/Mog domain BED34_08410 IPR003439 ABC transporter-like BED34_08410 IPR003838 ABC transporter permease protein domain BED34_08410 IPR003593 AAA+ ATPase domain BED34_08410 IPR017911 ABC transporter, macrolide export, ATP-binding domain BED34_08410 IPR017871 ABC transporter, conserved site BED34_08410 IPR025857 MacB-like periplasmic core domain BED34_08410 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_08430 IPR000801 Putative esterase BED34_08430 IPR014186 S-formylglutathione hydrolase BED34_08430 IPR029058 Alpha/Beta hydrolase fold BED34_08435 IPR036291 NAD(P)-binding domain superfamily BED34_08435 IPR013154 Alcohol dehydrogenase, N-terminal BED34_08435 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site BED34_08435 IPR020843 Polyketide synthase, enoylreductase domain BED34_08435 IPR011032 GroES-like superfamily BED34_08435 IPR014183 Alcohol dehydrogenase class III BED34_08435 IPR013149 Alcohol dehydrogenase, C-terminal BED34_08440 IPR005119 LysR, substrate-binding BED34_08440 IPR036390 Winged helix DNA-binding domain superfamily BED34_08440 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_08440 IPR000847 Transcription regulator HTH, LysR BED34_08445 IPR010645 Uncharacterised MFS-type transporter YbfB BED34_08445 IPR036259 MFS transporter superfamily BED34_08450 IPR018234 GTP cyclohydrolase I, conserved site BED34_08450 IPR020602 GTP cyclohydrolase I domain BED34_08450 IPR001474 GTP cyclohydrolase I BED34_08455 IPR007349 Domain of unknown function DUF418 BED34_08460 IPR028082 Periplasmic binding protein-like I BED34_08460 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BED34_08460 IPR000843 LacI-type HTH domain BED34_08465 IPR028082 Periplasmic binding protein-like I BED34_08465 IPR025997 Periplasmic binding protein BED34_08470 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_08470 IPR015862 ABC transporter, galactose import, MglA BED34_08470 IPR003593 AAA+ ATPase domain BED34_08470 IPR003439 ABC transporter-like BED34_08470 IPR017871 ABC transporter, conserved site BED34_08475 IPR001851 ABC transporter, permease BED34_08475 IPR030158 Galactoside transport system permease protein MglC BED34_08480 IPR009057 Homeobox-like domain superfamily BED34_08480 IPR002197 DNA binding HTH domain, Fis-type BED34_08480 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_08480 IPR002078 RNA polymerase sigma factor 54 interaction domain BED34_08480 IPR029016 GAF-like domain superfamily BED34_08480 IPR003018 GAF domain BED34_08480 IPR003593 AAA+ ATPase domain BED34_08480 IPR025944 Sigma-54 interaction domain, conserved site BED34_08480 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BED34_08490 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BED34_08490 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BED34_08495 IPR000671 Peptidase A31 family BED34_08495 IPR023430 Peptidase HybD-like domain superfamily BED34_08495 IPR004420 Peptidase A31, hydrogenase maturation protease HycI BED34_08500 IPR010005 Formate hydrogenlyase maturation HycH BED34_08505 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit BED34_08505 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit BED34_08510 IPR010226 NADH-quinone oxidoreductase, chain I BED34_08510 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BED34_08510 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BED34_08515 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily BED34_08515 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit BED34_08515 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site BED34_08515 IPR029014 [NiFe]-hydrogenase, large subunit BED34_08515 IPR001501 Nickel-dependent hydrogenase, large subunit BED34_08515 IPR001135 NADH-quinone oxidoreductase, subunit D BED34_08515 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily BED34_08520 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal BED34_08520 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit BED34_08525 IPR038730 Hydrogenase-4 component E-like BED34_08525 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like BED34_08530 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit BED34_08530 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal BED34_08535 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site BED34_08535 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H BED34_08540 IPR003918 NADH:ubiquinone oxidoreductase BED34_08540 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit BED34_08545 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BED34_08545 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BED34_08550 IPR000688 Hydrogenase maturation factor HypA/HybF BED34_08550 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site BED34_08555 IPR019812 Hydrogenase assembly chaperone, conserved site BED34_08555 IPR001109 Hydrogenase expression/formation protein, HupF/HypC BED34_08555 IPR037254 HupF/HypC superfamily BED34_08560 IPR023604 Uncharacterised protein family SanA BED34_08560 IPR003848 Domain of unknown function DUF218 BED34_08565 IPR037062 Malic enzyme, N-terminal domain superfamily BED34_08565 IPR012301 Malic enzyme, N-terminal domain BED34_08565 IPR036291 NAD(P)-binding domain superfamily BED34_08565 IPR023667 NAD-dependent malic enzyme, proteobacteria BED34_08565 IPR012302 Malic enzyme, NAD-binding BED34_08565 IPR001891 Malic oxidoreductase BED34_08565 IPR015884 Malic enzyme, conserved site BED34_08575 IPR020797 Cytidine deaminase, bacteria BED34_08575 IPR016192 APOBEC/CMP deaminase, zinc-binding BED34_08575 IPR016193 Cytidine deaminase-like BED34_08575 IPR002125 Cytidine and deoxycytidylate deaminase domain BED34_08575 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain BED34_08575 IPR006263 Cytidine deaminase, homodimeric BED34_08580 IPR007300 CidB/LrgB family BED34_08580 IPR005261 Conserved hypothetical protein CHP00659 BED34_08585 IPR005538 LrgA/CidA family BED34_08585 IPR022957 Uncharacterised protein family UPF0299 BED34_08590 IPR036259 MFS transporter superfamily BED34_08590 IPR011701 Major facilitator superfamily BED34_08590 IPR020846 Major facilitator superfamily domain BED34_08610 IPR012340 Nucleic acid-binding, OB-fold BED34_08610 IPR033911 Methioninyl-tRNA synthetase core domain BED34_08610 IPR015413 Methionyl/Leucyl tRNA synthetase BED34_08610 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED34_08610 IPR002547 tRNA-binding domain BED34_08610 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding BED34_08610 IPR014758 Methionyl-tRNA synthetase BED34_08610 IPR023458 Methionine-tRNA ligase, type 1 BED34_08610 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal BED34_08610 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain BED34_08610 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site BED34_08610 IPR029038 Methionyl-tRNA synthetase, Zn-domain BED34_08615 IPR034904 Fe-S cluster assembly domain superfamily BED34_08615 IPR019591 Mrp/NBP35 ATP-binding protein BED34_08615 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 BED34_08615 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_08615 IPR000808 Mrp, conserved site BED34_08620 IPR026008 Uridine kinase BED34_08620 IPR000764 Uridine kinase-like BED34_08620 IPR006083 Phosphoribulokinase/uridine kinase BED34_08620 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_08625 IPR029054 dUTPase-like BED34_08625 IPR011962 dCTP deaminase BED34_08625 IPR036157 dUTPase-like superfamily BED34_08625 IPR033704 dUTPase, trimeric BED34_08630 IPR007844 AsmA BED34_08635 IPR018385 C4-dicarboxylate anaerobic carrier-like BED34_08635 IPR004669 C4-dicarboxylate anaerobic carrier BED34_08640 IPR000644 CBS domain BED34_08640 IPR005496 Integral membrane protein TerC BED34_08640 IPR016169 FAD-binding, type PCMH, subdomain 2 BED34_08640 IPR036318 FAD-binding, type PCMH-like superfamily BED34_08640 IPR005170 Transporter-associated domain BED34_08650 IPR029044 Nucleotide-diphospho-sugar transferases BED34_08650 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form BED34_08650 IPR005835 Nucleotidyl transferase domain BED34_08655 IPR001173 Glycosyltransferase 2-like BED34_08655 IPR029044 Nucleotide-diphospho-sugar transferases BED34_08665 IPR013525 ABC-2 type transporter BED34_08670 IPR003439 ABC transporter-like BED34_08670 IPR003593 AAA+ ATPase domain BED34_08670 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_08675 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related BED34_08675 IPR011051 RmlC-like cupin domain superfamily BED34_08675 IPR014710 RmlC-like jelly roll fold BED34_08680 IPR001509 NAD-dependent epimerase/dehydratase BED34_08680 IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase BED34_08680 IPR036291 NAD(P)-binding domain superfamily BED34_08685 IPR001173 Glycosyltransferase 2-like BED34_08685 IPR029044 Nucleotide-diphospho-sugar transferases BED34_08685 IPR001296 Glycosyl transferase, family 1 BED34_08700 IPR001207 Transposase, mutator type BED34_08725 IPR005835 Nucleotidyl transferase domain BED34_08725 IPR029044 Nucleotide-diphospho-sugar transferases BED34_08725 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type BED34_08730 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type BED34_08730 IPR005835 Nucleotidyl transferase domain BED34_08730 IPR029044 Nucleotide-diphospho-sugar transferases BED34_08735 IPR013328 6-phosphogluconate dehydrogenase, domain 2 BED34_08735 IPR006184 6-phosphogluconate-binding site BED34_08735 IPR006114 6-phosphogluconate dehydrogenase, C-terminal BED34_08735 IPR006183 6-phosphogluconate dehydrogenase BED34_08735 IPR036291 NAD(P)-binding domain superfamily BED34_08735 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating BED34_08735 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding BED34_08735 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BED34_08740 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily BED34_08740 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain BED34_08740 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like BED34_08740 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase BED34_08740 IPR023019 Histidine biosynthesis bifunctional protein HisIE BED34_08745 IPR011060 Ribulose-phosphate binding barrel BED34_08745 IPR013785 Aldolase-type TIM barrel BED34_08745 IPR004651 Histidine biosynthesis, HisF BED34_08745 IPR006062 Histidine biosynthesis BED34_08750 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA BED34_08750 IPR006062 Histidine biosynthesis BED34_08750 IPR013785 Aldolase-type TIM barrel BED34_08750 IPR011060 Ribulose-phosphate binding barrel BED34_08750 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase BED34_08755 IPR010139 Imidazole glycerol phosphate synthase, subunit H BED34_08755 IPR029062 Class I glutamine amidotransferase-like BED34_08755 IPR017926 Glutamine amidotransferase BED34_08760 IPR006543 Histidinol-phosphate phosphatase BED34_08760 IPR023214 HAD superfamily BED34_08760 IPR006549 HAD-superfamily hydrolase,subfamily IIIA BED34_08760 IPR020566 Histidine biosynthesis bifunctional protein HisB BED34_08760 IPR036412 HAD-like superfamily BED34_08760 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site BED34_08760 IPR020568 Ribosomal protein S5 domain 2-type fold BED34_08760 IPR005954 Histidinol-phosphatase BED34_08760 IPR000807 Imidazoleglycerol-phosphate dehydratase BED34_08760 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily BED34_08765 IPR015424 Pyridoxal phosphate-dependent transferase BED34_08765 IPR005861 Histidinol-phosphate aminotransferase family BED34_08765 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED34_08765 IPR004839 Aminotransferase, class I/classII BED34_08765 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site BED34_08765 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED34_08770 IPR001692 Histidinol dehydrogenase, conserved site BED34_08770 IPR022695 Histidinol dehydrogenase, monofunctional BED34_08770 IPR016161 Aldehyde/histidinol dehydrogenase BED34_08770 IPR012131 Histidinol dehydrogenase BED34_08775 IPR013115 Histidine biosynthesis HisG, C-terminal BED34_08775 IPR011322 Nitrogen regulatory PII-like, alpha/beta BED34_08775 IPR001348 ATP phosphoribosyltransferase HisG BED34_08775 IPR020621 ATP phosphoribosyltransferase HisG, long form BED34_08775 IPR018198 ATP phosphoribosyltransferase, conserved site BED34_08775 IPR013820 ATP phosphoribosyltransferase, catalytic domain BED34_08775 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BED34_08780 IPR036291 NAD(P)-binding domain superfamily BED34_08780 IPR001509 NAD-dependent epimerase/dehydratase BED34_08785 IPR001851 ABC transporter, permease BED34_08790 IPR003593 AAA+ ATPase domain BED34_08790 IPR017871 ABC transporter, conserved site BED34_08790 IPR003439 ABC transporter-like BED34_08790 IPR015861 ABC transporter, ribose import, RbsA BED34_08790 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_08795 IPR016205 Glycerol dehydrogenase BED34_08795 IPR018211 Alcohol dehydrogenase, iron-type, conserved site BED34_08795 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA BED34_08805 IPR002293 Amino acid/polyamine transporter I BED34_08810 IPR023607 Exodeoxyribonuclease I BED34_08810 IPR034748 Exonuclease I, C-terminal alpha-helical domain BED34_08810 IPR012337 Ribonuclease H-like superfamily BED34_08810 IPR038649 Exonuclease I, SH3-like domain superfamily BED34_08810 IPR013620 Exodeoxyribonuclease I, C-terminal BED34_08810 IPR013520 Exonuclease, RNase T/DNA polymerase III BED34_08810 IPR034747 Exonuclease I, SH3-like domain BED34_08810 IPR036397 Ribonuclease H superfamily BED34_08815 IPR010080 Thioester reductase-like domain BED34_08815 IPR009081 Phosphopantetheine binding ACP domain BED34_08815 IPR036736 ACP-like superfamily BED34_08815 IPR036291 NAD(P)-binding domain superfamily BED34_08815 IPR020806 Polyketide synthase, phosphopantetheine-binding domain BED34_08815 IPR020845 AMP-binding, conserved site BED34_08815 IPR013120 Male sterility, NAD-binding BED34_08815 IPR042099 AMP-dependent synthetase-like superfamily BED34_08815 IPR000873 AMP-dependent synthetase/ligase BED34_08820 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein BED34_08825 IPR007458 Protein of unknown function DUF496 BED34_08830 IPR001851 ABC transporter, permease BED34_08835 IPR001851 ABC transporter, permease BED34_08845 IPR025997 Periplasmic binding protein BED34_08845 IPR028082 Periplasmic binding protein-like I BED34_08850 IPR006204 GHMP kinase N-terminal domain BED34_08850 IPR012363 Propanediol utilisation/coumermycin biosynthesis, PduX-related BED34_08850 IPR020568 Ribosomal protein S5 domain 2-type fold BED34_08850 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BED34_08855 IPR015424 Pyridoxal phosphate-dependent transferase BED34_08855 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED34_08855 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED34_08855 IPR005860 L-threonine-O-3-phosphate decarboxylase BED34_08855 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site BED34_08855 IPR004839 Aminotransferase, class I/classII BED34_08860 IPR028281 Siroheme synthase, central domain BED34_08860 IPR012409 Sirohaem synthase BED34_08860 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site BED34_08860 IPR037115 Sirohaem synthase, dimerisation domain superfamily BED34_08860 IPR036291 NAD(P)-binding domain superfamily BED34_08860 IPR000878 Tetrapyrrole methylase BED34_08860 IPR006366 Uroporphyrin-III C-methyltransferase BED34_08860 IPR019478 Sirohaem synthase, dimerisation domain BED34_08860 IPR006367 Sirohaem synthase, N-terminal BED34_08860 IPR014777 Tetrapyrrole methylase, subdomain 1 BED34_08860 IPR035996 Tetrapyrrole methylase superfamily BED34_08860 IPR014776 Tetrapyrrole methylase, subdomain 2 BED34_08865 IPR024896 Propionate kinase PduW BED34_08865 IPR000890 Aliphatic acid kinase, short-chain BED34_08865 IPR023865 Aliphatic acid kinase, short-chain, conserved site BED34_08865 IPR004372 Acetate/propionate kinase BED34_08870 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV BED34_08870 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_08875 IPR000249 Microcompartment protein, bacteria BED34_08875 IPR009307 Ethanolamine utilisation EutS BED34_08875 IPR037233 CcmK-like superfamily BED34_08885 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BED34_08885 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily BED34_08885 IPR026902 RnfC Barrel sandwich hybrid domain BED34_08885 IPR019554 Soluble ligand binding domain BED34_08885 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BED34_08885 IPR009051 Alpha-helical ferredoxin BED34_08885 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC BED34_08885 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain BED34_08890 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA BED34_08890 IPR039697 Iron-type alcohol dehydrogenase-like BED34_08890 IPR018211 Alcohol dehydrogenase, iron-type, conserved site BED34_08895 IPR012408 Acetaldehyde/propionaldehyde dehydrogenase, EutE/PduP-related BED34_08895 IPR016161 Aldehyde/histidinol dehydrogenase BED34_08895 IPR016163 Aldehyde dehydrogenase, C-terminal BED34_08895 IPR016162 Aldehyde dehydrogenase, N-terminal BED34_08895 IPR015590 Aldehyde dehydrogenase domain BED34_08900 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type BED34_08900 IPR036451 Cobalamin adenosyltransferase-like superfamily BED34_08900 IPR016030 Cobalamin adenosyltransferase-like BED34_08905 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml BED34_08905 IPR036677 EutN/Ccml superfamily BED34_08915 IPR008300 Phosphate propanoyltransferase BED34_08925 IPR037233 CcmK-like superfamily BED34_08925 IPR000249 Microcompartment protein, bacteria BED34_08925 IPR020808 Bacterial microcompartments protein, conserved site BED34_08935 IPR028975 Diol dehydratase-reactivating factor, alpha subunit, swiveling domain superfamily BED34_08935 IPR009191 Diol dehydratase-reactivating factor alpha subunit BED34_08935 IPR040916 DD-reactivating factor swiveling domain BED34_08935 IPR030994 Diol dehydratase reactivase ATPase-like domain BED34_08940 IPR003207 Propanediol/glycerol dehydratase, small subunit BED34_08940 IPR036091 Propanediol/glycerol dehydratase, small subunit superfamily BED34_08945 IPR025541 Propanediol/glycerol dehydratase, medium subunit BED34_08945 IPR003208 Diol/glycerol dehydratase/dehydratase reactivating factor BED34_08945 IPR010254 B12-dependent dehydratases, beta subunit BED34_08950 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic BED34_08950 IPR036999 Diol/glycerol dehydratase, large subunit superfamily BED34_08950 IPR003206 Diol/glycerol dehydratase, large subunit BED34_08955 IPR009193 Polyhedral organelle shell protein, EutL/PduB type BED34_08955 IPR030984 Microcompartment protein PduB BED34_08955 IPR000249 Microcompartment protein, bacteria BED34_08955 IPR037233 CcmK-like superfamily BED34_08960 IPR020808 Bacterial microcompartments protein, conserved site BED34_08960 IPR037233 CcmK-like superfamily BED34_08960 IPR000249 Microcompartment protein, bacteria BED34_08965 IPR022357 Major intrinsic protein, conserved site BED34_08965 IPR023271 Aquaporin-like BED34_08965 IPR000425 Major intrinsic protein BED34_08970 IPR018062 HTH domain AraC-type, conserved site BED34_08970 IPR018771 PocR domain BED34_08970 IPR020449 Transcription regulator HTH, AraC- type BED34_08970 IPR018060 DNA binding HTH domain, AraC-type BED34_08970 IPR009057 Homeobox-like domain superfamily BED34_08975 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain BED34_08975 IPR017929 CobB/CobQ glutamine amidotransferase BED34_08975 IPR029062 Class I glutamine amidotransferase-like BED34_08975 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA BED34_08975 IPR011698 CobB/CobQ-like glutamine amidotransferase BED34_08975 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_08985 IPR003722 Cobalamin biosynthesis precorrin-8X methylmutase CobH/CbiC BED34_08985 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily BED34_08990 IPR036074 CbiD superfamily BED34_08990 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD BED34_08995 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase BED34_08995 IPR000878 Tetrapyrrole methylase BED34_08995 IPR014777 Tetrapyrrole methylase, subdomain 1 BED34_08995 IPR035996 Tetrapyrrole methylase superfamily BED34_09000 IPR007848 Methyltransferase small domain BED34_09000 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED34_09000 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit BED34_09005 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site BED34_09005 IPR000878 Tetrapyrrole methylase BED34_09005 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase BED34_09005 IPR014776 Tetrapyrrole methylase, subdomain 2 BED34_09005 IPR035996 Tetrapyrrole methylase superfamily BED34_09005 IPR014777 Tetrapyrrole methylase, subdomain 1 BED34_09010 IPR021745 Cobalamin biosynthesis central region BED34_09010 IPR021744 Cobalamin synthesis G, N-terminal BED34_09010 IPR002750 CobE/GbiG C-terminal domain BED34_09010 IPR038029 GbiG N-terminal domain superfamily BED34_09010 IPR036518 CobE/GbiG C-terminal domain superfamily BED34_09015 IPR000878 Tetrapyrrole methylase BED34_09015 IPR006363 Precorrin-3B C17-methyltransferase domain BED34_09015 IPR035996 Tetrapyrrole methylase superfamily BED34_09015 IPR014777 Tetrapyrrole methylase, subdomain 1 BED34_09015 IPR014776 Tetrapyrrole methylase, subdomain 2 BED34_09020 IPR003723 Precorrin-6x reductase BED34_09025 IPR010388 Anaerobic cobalt chelatase BED34_09030 IPR014776 Tetrapyrrole methylase, subdomain 2 BED34_09030 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site BED34_09030 IPR014777 Tetrapyrrole methylase, subdomain 1 BED34_09030 IPR006364 Precorrin-2 C(20)-methyltransferase domain BED34_09030 IPR012382 Precorrin-2 C(20)-methyltransferase BED34_09030 IPR000878 Tetrapyrrole methylase BED34_09030 IPR035996 Tetrapyrrole methylase superfamily BED34_09035 IPR002751 Metal transport protein CbiM/NikMN BED34_09035 IPR018024 Cobalamin (vitamin B12) transport protein CbiM BED34_09040 IPR003705 Cobalt transport protein CbiN BED34_09045 IPR012809 Cobalt ECF transporter T component CbiQ BED34_09045 IPR003339 ABC/ECF transporter, transmembrane component BED34_09050 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_09050 IPR017871 ABC transporter, conserved site BED34_09050 IPR005876 Cobalt transport protein ATP-binding subunit BED34_09050 IPR003593 AAA+ ATPase domain BED34_09050 IPR003439 ABC transporter-like BED34_09050 IPR015856 ABC transporter, CbiO/EcfA subunit BED34_09055 IPR029062 Class I glutamine amidotransferase-like BED34_09055 IPR017929 CobB/CobQ glutamine amidotransferase BED34_09055 IPR033949 Cobyric acid synthase, glutamine amidotransferase type 1 BED34_09055 IPR004459 Cobyric acid synthase CobQ BED34_09055 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_09055 IPR011698 CobB/CobQ-like glutamine amidotransferase BED34_09065 IPR003805 Adenosylcobinamide-GDP ribazoletransferase BED34_09070 IPR017578 Alpha-ribazole phosphatase, CobC BED34_09070 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site BED34_09070 IPR013078 Histidine phosphatase superfamily, clade-1 BED34_09070 IPR029033 Histidine phosphatase superfamily BED34_09075 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal BED34_09075 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like BED34_09075 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily BED34_09075 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic BED34_09120 IPR037026 Vgr protein, OB-fold domain superfamily BED34_09120 IPR006531 Gp5 N-terminal BED34_09120 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset BED34_09120 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein BED34_09145 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED34_09145 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail BED34_09145 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body BED34_09145 IPR023437 Argininosuccinate synthase, type 2 subfamily BED34_09145 IPR018223 Argininosuccinate synthase, conserved site BED34_09145 IPR001518 Argininosuccinate synthase BED34_09150 IPR002528 Multi antimicrobial extrusion protein BED34_09160 IPR034291 Thiamine phosphate synthase BED34_09160 IPR036206 Thiamin phosphate synthase superfamily BED34_09160 IPR013785 Aldolase-type TIM barrel BED34_09160 IPR022998 Thiamine phosphate synthase/TenI BED34_09165 IPR000150 Cof family BED34_09165 IPR036412 HAD-like superfamily BED34_09165 IPR006379 HAD-superfamily hydrolase, subfamily IIB BED34_09165 IPR023214 HAD superfamily BED34_09170 IPR037171 NagB/RpiA transferase-like BED34_09170 IPR036390 Winged helix DNA-binding domain superfamily BED34_09170 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_09170 IPR018356 Transcription regulator, HTH DeoR-type, conserved site BED34_09170 IPR014036 DeoR C-terminal sensor domain BED34_09170 IPR001034 DeoR-type HTH domain BED34_09175 IPR023650 Beta-lactamase, class-A active site BED34_09175 IPR012338 Beta-lactamase/transpeptidase-like BED34_09175 IPR001466 Beta-lactamase-related BED34_09180 IPR011006 CheY-like superfamily BED34_09180 IPR036061 CheW-like domain superfamily BED34_09180 IPR002545 CheW-like domain BED34_09180 IPR001789 Signal transduction response regulator, receiver domain BED34_09180 IPR024181 Chemotaxis response regulator CheV BED34_09190 IPR000524 Transcription regulator HTH, GntR BED34_09190 IPR036390 Winged helix DNA-binding domain superfamily BED34_09190 IPR004839 Aminotransferase, class I/classII BED34_09190 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_09190 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED34_09190 IPR015424 Pyridoxal phosphate-dependent transferase BED34_09200 IPR013752 Ketopantoate reductase, C-terminal domain BED34_09200 IPR036291 NAD(P)-binding domain superfamily BED34_09200 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BED34_09200 IPR013328 6-phosphogluconate dehydrogenase, domain 2 BED34_09200 IPR003710 Ketopantoate reductase ApbA/PanE BED34_09200 IPR013332 Ketopantoate reductase, N-terminal domain BED34_09210 IPR013611 Transport-associated OB, type 2 BED34_09210 IPR008995 Molybdate/tungstate binding, C-terminal BED34_09210 IPR015853 ABC transporter, ferric cation import, FbpC BED34_09210 IPR017871 ABC transporter, conserved site BED34_09210 IPR003439 ABC transporter-like BED34_09210 IPR003593 AAA+ ATPase domain BED34_09210 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_09215 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED34_09215 IPR035906 MetI-like superfamily BED34_09220 IPR026045 Ferric binding protein BED34_09225 IPR020846 Major facilitator superfamily domain BED34_09225 IPR021159 Glycerate/sugar phosphate transporter, conserved site BED34_09225 IPR036259 MFS transporter superfamily BED34_09225 IPR000849 Sugar phosphate transporter BED34_09225 IPR011701 Major facilitator superfamily BED34_09230 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain BED34_09230 IPR007895 MASE1 BED34_09230 IPR005467 Histidine kinase domain BED34_09230 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BED34_09230 IPR003594 Histidine kinase/HSP90-like ATPase BED34_09235 IPR011006 CheY-like superfamily BED34_09235 IPR000792 Transcription regulator LuxR, C-terminal BED34_09235 IPR001789 Signal transduction response regulator, receiver domain BED34_09235 IPR016032 Signal transduction response regulator, C-terminal effector BED34_09240 IPR011006 CheY-like superfamily BED34_09240 IPR028141 Transcriptional regulator BED34_09240 IPR001789 Signal transduction response regulator, receiver domain BED34_09240 IPR024187 Signal transduction response regulator, citrate/malate metabolism BED34_09245 IPR039506 SpoOB, alpha-helical domain BED34_09245 IPR003594 Histidine kinase/HSP90-like ATPase BED34_09245 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB BED34_09245 IPR000014 PAS domain BED34_09245 IPR035965 PAS domain superfamily BED34_09245 IPR013767 PAS fold BED34_09245 IPR033463 Single cache domain 3 BED34_09245 IPR029151 Periplasmic sensor-like domain superfamily BED34_09245 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BED34_09245 IPR005467 Histidine kinase domain BED34_09245 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BED34_09260 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED34_09260 IPR000182 GNAT domain BED34_09260 IPR004821 Cytidyltransferase-like domain BED34_09260 IPR013166 Citrate lyase ligase, C-terminal BED34_09260 IPR005216 Citrate lyase ligase BED34_09260 IPR016181 Acyl-CoA N-acyltransferase BED34_09265 IPR006495 Citrate lyase acyl carrier protein CitD BED34_09265 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein BED34_09270 IPR005000 HpcH/HpaI aldolase/citrate lyase domain BED34_09270 IPR011206 Citrate lyase beta subunit-like BED34_09270 IPR040442 Pyruvate kinase-like domain superfamily BED34_09270 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily BED34_09270 IPR006475 Citrate lyase, beta subunit, bacteria BED34_09275 IPR037171 NagB/RpiA transferase-like BED34_09275 IPR006472 Citrate lyase, alpha subunit BED34_09280 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG BED34_09280 IPR002736 Triphosphoribosyl-dephospho-CoA protein BED34_09280 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase BED34_09285 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG BED34_09285 IPR002736 Triphosphoribosyl-dephospho-CoA protein BED34_09290 IPR030676 Citrate carrier CitT-related BED34_09290 IPR001898 Solute carrier family 13 BED34_09305 IPR038404 TRAP transporter solute receptor DctP superfamily BED34_09305 IPR018389 TRAP transporter solute receptor DctP/TeaA BED34_09305 IPR004682 TRAP transporter solute receptor, DctP family BED34_09315 IPR037143 4'-phosphopantetheinyl transferase domain superfamily BED34_09315 IPR041354 4'-phosphopantetheinyl transferase, N-terminal domain BED34_09315 IPR003542 Enterobactin synthetase-like, component D BED34_09315 IPR008278 4'-phosphopantetheinyl transferase domain BED34_09325 IPR020846 Major facilitator superfamily domain BED34_09325 IPR005828 Major facilitator, sugar transporter-like BED34_09325 IPR036259 MFS transporter superfamily BED34_09325 IPR003663 Sugar/inositol transporter BED34_09325 IPR005829 Sugar transporter, conserved site BED34_09330 IPR035895 HPr-like superfamily BED34_09330 IPR000032 Phosphocarrier protein HPr-like BED34_09330 IPR016258 Multiphosphoryl transfer protein FruB BED34_09330 IPR002114 Phosphotransferase system, HPr serine phosphorylation site BED34_09330 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site BED34_09330 IPR002178 PTS EIIA type-2 domain BED34_09330 IPR016152 Phosphotransferase/anion transporter BED34_09335 IPR018636 Protein of unknown function DUF2058 BED34_09340 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site BED34_09340 IPR020103 Pseudouridine synthase, catalytic domain superfamily BED34_09340 IPR006145 Pseudouridine synthase, RsuA/RluA BED34_09355 IPR008962 PapD-like superfamily BED34_09355 IPR001829 Pili assembly chaperone, bacterial BED34_09355 IPR016148 Pili assembly chaperone, C-terminal BED34_09355 IPR018046 Pili assembly chaperone, conserved site BED34_09355 IPR016147 Pili assembly chaperone, N-terminal BED34_09355 IPR036316 Pili assembly chaperone, C-terminal domain superfamily BED34_09355 IPR013783 Immunoglobulin-like fold BED34_09365 IPR037224 PapC, N-terminal domain superfamily BED34_09365 IPR025885 PapC, N-terminal domain BED34_09365 IPR025949 PapC-like, C-terminal domain BED34_09365 IPR042186 Outer membrane usher protein FimD, plug domain BED34_09365 IPR018030 Fimbrial membrane usher, conserved site BED34_09365 IPR000015 Outer membrane usher protein BED34_09370 IPR016147 Pili assembly chaperone, N-terminal BED34_09370 IPR018046 Pili assembly chaperone, conserved site BED34_09370 IPR016148 Pili assembly chaperone, C-terminal BED34_09370 IPR036316 Pili assembly chaperone, C-terminal domain superfamily BED34_09370 IPR008962 PapD-like superfamily BED34_09370 IPR001829 Pili assembly chaperone, bacterial BED34_09370 IPR013783 Immunoglobulin-like fold BED34_09385 IPR000792 Transcription regulator LuxR, C-terminal BED34_09385 IPR001789 Signal transduction response regulator, receiver domain BED34_09385 IPR016032 Signal transduction response regulator, C-terminal effector BED34_09385 IPR011006 CheY-like superfamily BED34_09395 IPR010384 MtfA family BED34_09395 IPR042252 MtfA, N-terminal BED34_09395 IPR024079 Metallopeptidase, catalytic domain superfamily BED34_09405 IPR018484 Carbohydrate kinase, FGGY, N-terminal BED34_09405 IPR018483 Carbohydrate kinase, FGGY, conserved site BED34_09405 IPR000577 Carbohydrate kinase, FGGY BED34_09405 IPR018485 Carbohydrate kinase, FGGY, C-terminal BED34_09430 IPR016147 Pili assembly chaperone, N-terminal BED34_09430 IPR008962 PapD-like superfamily BED34_09430 IPR036316 Pili assembly chaperone, C-terminal domain superfamily BED34_09430 IPR013783 Immunoglobulin-like fold BED34_09435 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED34_09435 IPR003346 Transposase, IS116/IS110/IS902 BED34_09440 IPR011831 Glucose-1-phosphate adenylyltransferase BED34_09440 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial BED34_09440 IPR005835 Nucleotidyl transferase domain BED34_09440 IPR029044 Nucleotide-diphospho-sugar transferases BED34_09440 IPR011004 Trimeric LpxA-like superfamily BED34_09440 IPR005836 ADP-glucose pyrophosphorylase, conserved site BED34_09450 IPR017704 Putative selenium-binding protein YdfZ BED34_09465 IPR019713 Inner membrane protein YlaC BED34_09470 IPR016039 Thiolase-like BED34_09470 IPR014043 Acyl transferase BED34_09470 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding BED34_09470 IPR011032 GroES-like superfamily BED34_09470 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase BED34_09470 IPR018201 Beta-ketoacyl synthase, active site BED34_09470 IPR009081 Phosphopantetheine binding ACP domain BED34_09470 IPR020843 Polyketide synthase, enoylreductase domain BED34_09470 IPR013154 Alcohol dehydrogenase, N-terminal BED34_09470 IPR001227 Acyl transferase domain superfamily BED34_09470 IPR036291 NAD(P)-binding domain superfamily BED34_09470 IPR032821 Ketoacyl-synthetase, C-terminal extension BED34_09470 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BED34_09470 IPR020807 Polyketide synthase, dehydratase domain BED34_09470 IPR020806 Polyketide synthase, phosphopantetheine-binding domain BED34_09470 IPR013968 Polyketide synthase, ketoreductase domain BED34_09470 IPR042104 Polyketide synthase, dehydratase domain superfamily BED34_09470 IPR014030 Beta-ketoacyl synthase, N-terminal BED34_09470 IPR036736 ACP-like superfamily BED34_09470 IPR014031 Beta-ketoacyl synthase, C-terminal BED34_09470 IPR013149 Alcohol dehydrogenase, C-terminal BED34_09475 IPR001207 Transposase, mutator type BED34_09480 IPR023232 Glycoside hydrolase, family 2, active site BED34_09480 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase BED34_09480 IPR006101 Glycoside hydrolase, family 2 BED34_09480 IPR014718 Glycoside hydrolase-type carbohydrate-binding BED34_09480 IPR006103 Glycoside hydrolase family 2, catalytic domain BED34_09480 IPR023230 Glycoside hydrolase, family 2, conserved site BED34_09480 IPR008979 Galactose-binding-like domain superfamily BED34_09480 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily BED34_09480 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich BED34_09480 IPR006104 Glycosyl hydrolases family 2, sugar binding domain BED34_09480 IPR011013 Galactose mutarotase-like domain superfamily BED34_09480 IPR004199 Beta galactosidase small chain/ domain 5 BED34_09480 IPR013783 Immunoglobulin-like fold BED34_09480 IPR032312 Beta-galactosidase, domain 4 BED34_09480 IPR017853 Glycoside hydrolase superfamily BED34_09485 IPR028082 Periplasmic binding protein-like I BED34_09485 IPR000843 LacI-type HTH domain BED34_09485 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BED34_09490 IPR012340 Nucleic acid-binding, OB-fold BED34_09490 IPR002059 Cold-shock protein, DNA-binding BED34_09490 IPR019844 Cold-shock (CSD) domain BED34_09490 IPR011129 Cold shock domain BED34_09490 IPR012156 Cold shock, CspA BED34_09495 IPR019717 Dextransucrase DSRB BED34_09500 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding BED34_09500 IPR004090 Chemotaxis methyl-accepting receptor BED34_09500 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BED34_09500 IPR003660 HAMP domain BED34_09500 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site BED34_09500 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily BED34_09515 IPR003416 MgtC/SapB/SrpB/YhiD family BED34_09520 IPR001757 P-type ATPase BED34_09520 IPR023214 HAD superfamily BED34_09520 IPR004014 Cation-transporting P-type ATPase, N-terminal BED34_09520 IPR036412 HAD-like superfamily BED34_09520 IPR008250 P-type ATPase, A domain superfamily BED34_09520 IPR023298 P-type ATPase, transmembrane domain superfamily BED34_09520 IPR018303 P-type ATPase, phosphorylation site BED34_09520 IPR006415 P-type ATPase, subfamily IIIB BED34_09520 IPR023299 P-type ATPase, cytoplasmic domain N BED34_09520 IPR006068 Cation-transporting P-type ATPase, C-terminal BED34_09525 IPR011032 GroES-like superfamily BED34_09525 IPR036291 NAD(P)-binding domain superfamily BED34_09525 IPR020843 Polyketide synthase, enoylreductase domain BED34_09525 IPR041694 Oxidoreductase, N-terminal domain BED34_09525 IPR013149 Alcohol dehydrogenase, C-terminal BED34_09530 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED34_09530 IPR006015 Universal stress protein A family BED34_09530 IPR006016 UspA BED34_09535 IPR023559 Flagellar transcriptional activator FlhD BED34_09535 IPR036194 Flagellar transcriptional activator FlhD superfamily BED34_09540 IPR007944 Flagellar transcriptional activator FlhC BED34_09545 IPR000540 Flagellar motor protein MotA, conserved site BED34_09545 IPR022522 Flagellar motor stator, MotA BED34_09545 IPR002898 MotA/TolQ/ExbB proton channel BED34_09550 IPR006665 OmpA-like domain BED34_09550 IPR025713 Motility protein B, N-terminal domain BED34_09550 IPR036737 OmpA-like domain superfamily BED34_09555 IPR035891 CheY-binding domain of CheA BED34_09555 IPR003594 Histidine kinase/HSP90-like ATPase BED34_09555 IPR002545 CheW-like domain BED34_09555 IPR036061 CheW-like domain superfamily BED34_09555 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily BED34_09555 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BED34_09555 IPR015162 CheY binding BED34_09555 IPR005467 Histidine kinase domain BED34_09555 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BED34_09555 IPR036641 HPT domain superfamily BED34_09555 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BED34_09555 IPR004105 Histidine kinase CheA-like, homodimeric domain BED34_09555 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain BED34_09560 IPR036061 CheW-like domain superfamily BED34_09560 IPR002545 CheW-like domain BED34_09560 IPR039315 Chemotaxis protein CheW BED34_09565 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily BED34_09565 IPR003660 HAMP domain BED34_09565 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site BED34_09565 IPR004090 Chemotaxis methyl-accepting receptor BED34_09565 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BED34_09565 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding BED34_09570 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding BED34_09570 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BED34_09570 IPR003660 HAMP domain BED34_09570 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site BED34_09570 IPR004090 Chemotaxis methyl-accepting receptor BED34_09570 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily BED34_09575 IPR000780 MCP methyltransferase, CheR-type BED34_09575 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal BED34_09575 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily BED34_09575 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED34_09575 IPR026024 Chemotaxis protein methyltransferase CheR BED34_09575 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal BED34_09580 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type BED34_09580 IPR035909 Methylesterase CheB, C-terminal BED34_09580 IPR011006 CheY-like superfamily BED34_09580 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase BED34_09580 IPR001789 Signal transduction response regulator, receiver domain BED34_09585 IPR011006 CheY-like superfamily BED34_09585 IPR001789 Signal transduction response regulator, receiver domain BED34_09590 IPR007439 Chemotaxis phosphatase, CheZ BED34_09600 IPR029025 Type III secretion system substrate exporter, C-terminal BED34_09600 IPR006135 Type III secretion system substrate exporter BED34_09600 IPR006136 Flagellar biosynthetic protein FlhB BED34_09605 IPR001712 Type III secretion system FHIPEP BED34_09605 IPR006301 Flagellar biosynthesis protein FlhA BED34_09605 IPR025505 FHIPEP conserved site BED34_09605 IPR042196 FHIPEP, domain 4 BED34_09605 IPR042193 FHIPEP, domain 3 BED34_09605 IPR042194 FHIPEP, domain 1 BED34_09610 IPR009420 Flagellar protein FlhE BED34_09620 IPR007809 FlgN-like protein BED34_09620 IPR036679 FlgN-like superfamily BED34_09625 IPR035890 Anti-sigma-28 factor FlgM superfamily BED34_09625 IPR007412 Anti-sigma-28 factor, FlgM BED34_09625 IPR031316 Anti-sigma-28 factor FlgM, C-terminal BED34_09630 IPR041231 FlgA, N-terminal BED34_09630 IPR039246 Flagellar protein FlgA BED34_09630 IPR013974 SAF domain BED34_09630 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal BED34_09635 IPR001444 Flagellar basal body rod protein, N-terminal BED34_09635 IPR006300 Flagellar basal-body rod protein FlgB BED34_09635 IPR019776 Flagellar basal body rod protein, conserved site BED34_09640 IPR001444 Flagellar basal body rod protein, N-terminal BED34_09640 IPR006299 Flagellar basal-body rod protein FlgC BED34_09640 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BED34_09640 IPR019776 Flagellar basal body rod protein, conserved site BED34_09645 IPR025963 FlgD Tudor-like domain BED34_09645 IPR005648 Flagellar hook capping protein BED34_09645 IPR025965 FlgD Ig-like domain BED34_09650 IPR037058 Flagellar hook protein FlgE superfamily BED34_09650 IPR001444 Flagellar basal body rod protein, N-terminal BED34_09650 IPR011491 Flagellar hook protein FlgE BED34_09650 IPR019776 Flagellar basal body rod protein, conserved site BED34_09650 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BED34_09650 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like BED34_09650 IPR020013 Flagellar hook-basal body protein, FlgE/F/G BED34_09655 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like BED34_09655 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BED34_09655 IPR020013 Flagellar hook-basal body protein, FlgE/F/G BED34_09655 IPR001444 Flagellar basal body rod protein, N-terminal BED34_09655 IPR019776 Flagellar basal body rod protein, conserved site BED34_09660 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like BED34_09660 IPR012834 Flagellar basal-body rod FlgG BED34_09660 IPR019776 Flagellar basal body rod protein, conserved site BED34_09660 IPR001444 Flagellar basal body rod protein, N-terminal BED34_09660 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BED34_09660 IPR020013 Flagellar hook-basal body protein, FlgE/F/G BED34_09665 IPR000527 Flagellar L-ring protein BED34_09670 IPR001782 Flagellar P-ring protein BED34_09675 IPR019301 Flagellar protein FlgJ, N-terminal BED34_09675 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain BED34_09675 IPR013377 Peptidoglycan hydrolase FlgJ BED34_09680 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BED34_09680 IPR001444 Flagellar basal body rod protein, N-terminal BED34_09680 IPR002371 Flagellar hook-associated protein 1 BED34_09685 IPR013384 Flagellar hook-associated protein 3 BED34_09685 IPR001029 Flagellin, D0/D1 domain BED34_09690 IPR006303 Flagellar biosynthesis protein FliR BED34_09690 IPR002010 Type III secretion system inner membrane R protein BED34_09695 IPR006305 Flagellar biosynthesis protein FliQ BED34_09695 IPR002191 Bacterial export protein family 3 BED34_09700 IPR005838 Type III secretion system inner membrane P protein BED34_09700 IPR005837 Flagellar transport protein FliP BED34_09705 IPR022781 Flagellar biosynthesis protein, FliO BED34_09710 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb BED34_09710 IPR036429 SpoA-like superfamily BED34_09710 IPR012826 Flagellar motor switch FliN BED34_09710 IPR031576 Flagellar motor switch protein FliN, N-terminal BED34_09710 IPR001543 Surface presentation of antigen (SpoA) BED34_09715 IPR036429 SpoA-like superfamily BED34_09715 IPR001543 Surface presentation of antigen (SpoA) BED34_09715 IPR028976 CheC-like superfamily BED34_09715 IPR001689 Flagellar motor switch protein FliM BED34_09720 IPR005503 Flagellar basal body-associated protein FliL BED34_09725 IPR021136 Flagellar hook-length control protein-like, C-terminal BED34_09725 IPR001635 Flagellar hook-length control protein FliK BED34_09725 IPR038610 FliK-like, C-terminal domain superfamily BED34_09730 IPR018006 Flagellar FliJ, proteobacteria BED34_09730 IPR012823 Flagellar export FliJ BED34_09735 IPR032463 ATPase, type III secretion system, FliI BED34_09735 IPR005714 ATPase, type III secretion system, FliI/YscN BED34_09735 IPR020005 Flagellar export ATPase FliI, clade 1 BED34_09735 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site BED34_09735 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_09735 IPR003593 AAA+ ATPase domain BED34_09735 IPR040627 T3SS EscN ATPase, C-terminal BED34_09735 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain BED34_09740 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE BED34_09740 IPR000563 Flagellar assembly protein FliH BED34_09745 IPR032779 Flagellar motor switch protein FliG, middle domain BED34_09745 IPR011002 Flagellar motor switch protein FliG, alpha-helical BED34_09745 IPR000090 Flagellar motor switch protein FliG BED34_09745 IPR023087 Flagellar motor switch protein FliG, C-terminal BED34_09745 IPR028263 Flagellar motor switch protein FliG, N-terminal domain BED34_09750 IPR013556 Flagellar M-ring C-terminal BED34_09750 IPR000067 Flagellar M-ring protein FliF BED34_09750 IPR006182 Secretory protein YscJ/FliF BED34_09755 IPR001624 Flagellar hook-basal body complex protein FliE BED34_09760 IPR010998 Integrase/recombinase, N-terminal BED34_09760 IPR022000 Min27-like integrase, DNA-binding domain BED34_09760 IPR013762 Integrase-like, catalytic domain superfamily BED34_09760 IPR002104 Integrase, catalytic domain BED34_09760 IPR011010 DNA breaking-rejoining enzyme, catalytic core BED34_09780 IPR003265 HhH-GPD domain BED34_09780 IPR011257 DNA glycosylase BED34_09785 IPR006674 HD domain BED34_09785 IPR003607 HD/PDEase domain BED34_09785 IPR037522 HD-GYP domain BED34_09785 IPR006675 HDIG domain BED34_09790 IPR009057 Homeobox-like domain superfamily BED34_09790 IPR020449 Transcription regulator HTH, AraC- type BED34_09790 IPR018062 HTH domain AraC-type, conserved site BED34_09790 IPR018060 DNA binding HTH domain, AraC-type BED34_09795 IPR008622 Flagellar protein FliT BED34_09800 IPR003713 Flagellar protein FliS BED34_09800 IPR036584 Flagellar protein FliS superfamily BED34_09805 IPR010810 Flagellin hook, IN motif BED34_09805 IPR003481 Flagellar hook-associated protein 2, N-terminal BED34_09805 IPR010809 Flagellar hook-associated protein 2, C-terminal BED34_09805 IPR040026 Flagellar hook-associated protein 2 BED34_09810 IPR014981 Flagellin D3 BED34_09810 IPR001029 Flagellin, D0/D1 domain BED34_09810 IPR001492 Flagellin BED34_09815 IPR014981 Flagellin D3 BED34_09815 IPR001492 Flagellin BED34_09815 IPR001029 Flagellin, D0/D1 domain BED34_09825 IPR013325 RNA polymerase sigma factor, region 2 BED34_09825 IPR000943 RNA polymerase sigma-70 BED34_09825 IPR007627 RNA polymerase sigma-70 region 2 BED34_09825 IPR007624 RNA polymerase sigma-70 region 3 BED34_09825 IPR007630 RNA polymerase sigma-70 region 4 BED34_09825 IPR012845 RNA polymerase sigma factor, FliA/WhiG BED34_09825 IPR014284 RNA polymerase sigma-70 like domain BED34_09825 IPR013324 RNA polymerase sigma factor, region 3/4-like BED34_09825 IPR028617 RNA polymerase sigma factor FliA BED34_09830 IPR022523 Flagellar regulator, FliZ BED34_09830 IPR004107 Integrase, SAM-like, N-terminal BED34_09835 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BED34_09835 IPR001926 Pyridoxal-phosphate dependent enzyme BED34_09835 IPR023702 D-cysteine desulphhydrase, bacterial BED34_09835 IPR005966 D-cysteine desulfhydrase BED34_09835 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase BED34_09865 IPR041349 Proline utilization A proline dehydrogenase N-terminal domain BED34_09865 IPR024090 Proline dehydrogenase PutA, domain I BED34_09865 IPR016161 Aldehyde/histidinol dehydrogenase BED34_09865 IPR016163 Aldehyde dehydrogenase, C-terminal BED34_09865 IPR016160 Aldehyde dehydrogenase, cysteine active site BED34_09865 IPR029510 Aldehyde dehydrogenase, glutamic acid active site BED34_09865 IPR015590 Aldehyde dehydrogenase domain BED34_09865 IPR013321 Arc-type ribbon-helix-helix BED34_09865 IPR025703 Bifunctional protein PutA BED34_09865 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 BED34_09865 IPR016162 Aldehyde dehydrogenase, N-terminal BED34_09865 IPR024089 Proline dehydrogenase PutA, domain I/II BED34_09865 IPR010985 Ribbon-helix-helix BED34_09865 IPR002872 Proline dehydrogenase domain BED34_09865 IPR024082 Proline dehydrogenase PutA, domain II BED34_09865 IPR029041 FAD-linked oxidoreductase-like BED34_09870 IPR038377 Sodium/glucose symporter superfamily BED34_09870 IPR011851 Sodium/proline symporter BED34_09870 IPR001734 Sodium/solute symporter BED34_09870 IPR018212 Sodium/solute symporter, conserved site BED34_09885 IPR008514 Type VI secretion system effector, Hcp BED34_09885 IPR003615 HNH nuclease BED34_09885 IPR036624 Hcp1-like superfamily BED34_09890 IPR004923 Iron permease FTR1/Fip1/EfeU BED34_09895 IPR038352 Imelysin-like domain superfamily BED34_09895 IPR018976 Imelysin-like domain BED34_09895 IPR028096 EfeO-type cupredoxin-like domain BED34_09895 IPR034981 EfeO/Algp7, imelysin-like domain BED34_09895 IPR008972 Cupredoxin BED34_09900 IPR006311 Twin-arginine translocation pathway, signal sequence BED34_09900 IPR011008 Dimeric alpha-beta barrel BED34_09900 IPR006314 Dyp-type peroxidase BED34_09900 IPR006313 Deferrochelatase/peroxidase EfeB BED34_09905 IPR037513 NAD(P)H dehydrogenase (quinone), prokaryotic BED34_09905 IPR005025 NADPH-dependent FMN reductase-like BED34_09905 IPR010089 Flavoprotein WrbA-like BED34_09905 IPR029039 Flavoprotein-like superfamily BED34_09905 IPR008254 Flavodoxin/nitric oxide synthase BED34_09915 IPR019936 Mutatrotase, YjhT-like BED34_09915 IPR006652 Kelch repeat type 1 BED34_09915 IPR015915 Kelch-type beta propeller BED34_09930 IPR019917 FMN reductase (NADH) RutF BED34_09930 IPR002563 Flavin reductase like domain BED34_09930 IPR012349 FMN-binding split barrel BED34_09935 IPR000415 Nitroreductase-like BED34_09935 IPR029479 Nitroreductase BED34_09935 IPR023936 NADH dehydrogenase/NAD(P)H nitroreductase, putative, RutE BED34_09940 IPR029058 Alpha/Beta hydrolase fold BED34_09940 IPR000073 Alpha/beta hydrolase fold-1 BED34_09940 IPR019913 Pyrimidine utilisation protein RutD BED34_09945 IPR019897 RidA, conserved site BED34_09945 IPR019898 Putative aminoacrylate peracid reductase RutC BED34_09945 IPR035959 RutC-like superfamily BED34_09945 IPR006175 YjgF/YER057c/UK114 family BED34_09950 IPR019916 Isochorismatase, RutB BED34_09950 IPR036380 Isochorismatase-like superfamily BED34_09950 IPR000868 Isochorismatase-like BED34_09960 IPR009057 Homeobox-like domain superfamily BED34_09960 IPR001647 DNA-binding HTH domain, TetR-type BED34_09960 IPR013573 Transcription regulator YcdC, C-terminal BED34_09960 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BED34_09960 IPR019915 Transcription regulator, pyrimidine utilisation, RutR BED34_09965 IPR004841 Amino acid permease/ SLC12A domain BED34_09965 IPR004840 Amino acid permease, conserved site BED34_09975 IPR011010 DNA breaking-rejoining enzyme, catalytic core BED34_09975 IPR010998 Integrase/recombinase, N-terminal BED34_09975 IPR013762 Integrase-like, catalytic domain superfamily BED34_09975 IPR002104 Integrase, catalytic domain BED34_09980 IPR009057 Homeobox-like domain superfamily BED34_09980 IPR002514 Transposase IS3/IS911family BED34_09995 IPR001943 UVR domain BED34_09995 IPR036876 UVR domain superfamily BED34_09995 IPR000305 GIY-YIG endonuclease BED34_09995 IPR010994 RuvA domain 2-like BED34_09995 IPR035901 GIY-YIG endonuclease superfamily BED34_09995 IPR038476 UvrC homology region 2 superfamily BED34_09995 IPR001162 UvrC family homology region BED34_09995 IPR004791 UvrABC system, subunit C BED34_10000 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase BED34_10000 IPR000462 CDP-alcohol phosphatidyltransferase BED34_10000 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial BED34_10020 IPR007684 Zinc finger, Ogr/Delta-type BED34_10095 IPR000847 Transcription regulator HTH, LysR BED34_10095 IPR036390 Winged helix DNA-binding domain superfamily BED34_10095 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_10095 IPR005119 LysR, substrate-binding BED34_10105 IPR011004 Trimeric LpxA-like superfamily BED34_10105 IPR001451 Hexapeptide repeat BED34_10105 IPR018357 Hexapeptide transferase, conserved site BED34_10115 IPR010534 Bacteriophage 933W, GpQ BED34_10120 IPR019689 Toxin GhoT/OrtT BED34_10130 IPR023346 Lysozyme-like domain superfamily BED34_10130 IPR002196 Glycoside hydrolase, family 24 BED34_10130 IPR034690 Endolysin T4 type BED34_10135 IPR029058 Alpha/Beta hydrolase fold BED34_10135 IPR000073 Alpha/beta hydrolase fold-1 BED34_10140 IPR007486 Inner membrane protein YebE BED34_10140 IPR029024 TerB-like BED34_10145 IPR005119 LysR, substrate-binding BED34_10145 IPR000847 Transcription regulator HTH, LysR BED34_10145 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_10145 IPR036390 Winged helix DNA-binding domain superfamily BED34_10150 IPR001466 Beta-lactamase-related BED34_10150 IPR001586 Beta-lactamase, class-C active site BED34_10150 IPR012338 Beta-lactamase/transpeptidase-like BED34_10155 IPR023192 TGS-like domain superfamily BED34_10155 IPR041706 YchF, N-terminal BED34_10155 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 BED34_10155 IPR013029 YchF, C-terminal domain BED34_10155 IPR006073 GTP binding domain BED34_10155 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_10155 IPR004095 TGS BED34_10155 IPR012676 TGS-like BED34_10155 IPR012675 Beta-grasp domain superfamily BED34_10155 IPR031167 OBG-type guanine nucleotide-binding (G) domain BED34_10165 IPR001328 Peptidyl-tRNA hydrolase BED34_10165 IPR036416 Peptidyl-tRNA hydrolase superfamily BED34_10165 IPR018171 Peptidyl-tRNA hydrolase, conserved site BED34_10170 IPR019698 Protein of unknown function DUF2583 BED34_10180 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type BED34_10180 IPR005946 Ribose-phosphate pyrophosphokinase BED34_10180 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site BED34_10180 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain BED34_10180 IPR029057 Phosphoribosyltransferase-like BED34_10180 IPR000836 Phosphoribosyltransferase domain BED34_10185 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BED34_10185 IPR013750 GHMP kinase, C-terminal domain BED34_10185 IPR036554 GHMP kinase, C-terminal domain superfamily BED34_10185 IPR006204 GHMP kinase N-terminal domain BED34_10185 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase BED34_10185 IPR020568 Ribosomal protein S5 domain 2-type fold BED34_10190 IPR029046 Lipoprotein localisation LolA/LolB/LppX BED34_10190 IPR004565 Outer membrane lipoprotein LolB BED34_10195 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase BED34_10195 IPR036291 NAD(P)-binding domain superfamily BED34_10195 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily BED34_10195 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily BED34_10195 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain BED34_10195 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal BED34_10195 IPR018214 Glutamyl-tRNA reductase, conserved site BED34_10195 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase BED34_10200 IPR000352 Peptide chain release factor class I BED34_10200 IPR005139 Peptide chain release factor BED34_10200 IPR004373 Peptide chain release factor 1 BED34_10205 IPR004556 Methyltransferase HemK-like BED34_10205 IPR025714 Methyltransferase domain BED34_10205 IPR040758 Release factor glutamine methyltransferase, N-terminal domain BED34_10205 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific BED34_10205 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED34_10205 IPR002052 DNA methylase, N-6 adenine-specific, conserved site BED34_10210 IPR007360 Invasion gene expression up-regulator, SirB BED34_10215 IPR032698 Protein SirB1, N-terminal BED34_10220 IPR013785 Aldolase-type TIM barrel BED34_10220 IPR006218 DAHP synthetase I/KDSA BED34_10220 IPR006269 3-deoxy-8-phosphooctulonate synthase BED34_10225 IPR011547 SLC26A/SulP transporter domain BED34_10225 IPR018045 Sulphate anion transporter, conserved site BED34_10225 IPR036513 STAS domain superfamily BED34_10225 IPR002645 STAS domain BED34_10225 IPR001902 SLC26A/SulP transporter BED34_10230 IPR009050 Globin-like superfamily BED34_10230 IPR012292 Globin/Protoglobin BED34_10230 IPR000160 GGDEF domain BED34_10230 IPR039435 Diguanylate cyclase DosC, globin sensor domain BED34_10230 IPR029787 Nucleotide cyclase BED34_10255 IPR016195 Polymerase/histidinol phosphatase-like BED34_10255 IPR003141 Polymerase/histidinol phosphatase, N-terminal BED34_10255 IPR004013 PHP domain BED34_10255 IPR023710 Probable phosphatase YcdX BED34_10260 IPR026269 Tat proofreading chaperone DmsD-type BED34_10260 IPR020945 DMSO/Nitrate reductase chaperone BED34_10260 IPR036411 TorD-like superfamily BED34_10265 IPR010835 Protein of unknown function DUF1439 BED34_10270 IPR036259 MFS transporter superfamily BED34_10270 IPR011701 Major facilitator superfamily BED34_10270 IPR022855 Multidrug resistance protein MdtH BED34_10270 IPR020846 Major facilitator superfamily domain BED34_10285 IPR000182 GNAT domain BED34_10285 IPR016181 Acyl-CoA N-acyltransferase BED34_10290 IPR007432 Protein of unknown function DUF480 BED34_10290 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_10290 IPR036390 Winged helix DNA-binding domain superfamily BED34_10295 IPR036291 NAD(P)-binding domain superfamily BED34_10295 IPR000683 Oxidoreductase, N-terminal BED34_10300 IPR004268 Peptidoglycan biosynthesis protein MurJ BED34_10305 IPR004837 Sodium/calcium exchanger membrane region BED34_10305 IPR004713 Calcium/proton exchanger BED34_10315 IPR020846 Major facilitator superfamily domain BED34_10315 IPR011701 Major facilitator superfamily BED34_10315 IPR036259 MFS transporter superfamily BED34_10320 IPR003346 Transposase, IS116/IS110/IS902 BED34_10320 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED34_10330 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain BED34_10330 IPR005467 Histidine kinase domain BED34_10330 IPR029095 NarX-like, N-terminal BED34_10330 IPR003594 Histidine kinase/HSP90-like ATPase BED34_10330 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BED34_10330 IPR042295 NarX-like, N-terminal domain superfamily BED34_10330 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing BED34_10330 IPR003660 HAMP domain BED34_10335 IPR003317 Cytochrome ubiquinol oxidase subunit 2 BED34_10340 IPR002585 Cytochrome ubiquinol oxidase subunit 1 BED34_10345 IPR004839 Aminotransferase, class I/classII BED34_10345 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_10345 IPR015424 Pyridoxal phosphate-dependent transferase BED34_10345 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED34_10345 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED34_10345 IPR036390 Winged helix DNA-binding domain superfamily BED34_10345 IPR000524 Transcription regulator HTH, GntR BED34_10350 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED34_10350 IPR015424 Pyridoxal phosphate-dependent transferase BED34_10350 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria BED34_10350 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED34_10350 IPR004636 Acetylornithine/Succinylornithine transaminase family BED34_10350 IPR005814 Aminotransferase class-III BED34_10350 IPR026330 Succinylornithine transaminase BED34_10355 IPR016181 Acyl-CoA N-acyltransferase BED34_10355 IPR007041 Arginine N-succinyltransferase AstA/AruG BED34_10355 IPR017650 Arginine N-succinyltransferase BED34_10360 IPR017649 Succinylglutamate-semialdehyde dehydrogenase BED34_10360 IPR016161 Aldehyde/histidinol dehydrogenase BED34_10360 IPR016163 Aldehyde dehydrogenase, C-terminal BED34_10360 IPR015590 Aldehyde dehydrogenase domain BED34_10360 IPR029510 Aldehyde dehydrogenase, glutamic acid active site BED34_10360 IPR016162 Aldehyde dehydrogenase, N-terminal BED34_10360 IPR016160 Aldehyde dehydrogenase, cysteine active site BED34_10365 IPR037031 Succinylarginine dihydrolase superfamily BED34_10365 IPR007079 Succinylarginine dihydrolase BED34_10370 IPR007036 Succinylglutamate desuccinylase/aspartoacylase BED34_10370 IPR016681 Succinylglutamate desuccinylase BED34_10375 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED34_10375 IPR003346 Transposase, IS116/IS110/IS902 BED34_10380 IPR013793 Porin, Gram-negative type, conserved site BED34_10380 IPR023614 Porin domain superfamily BED34_10380 IPR033900 Porin domain, Gram-negative type BED34_10380 IPR001897 Porin, gammaproteobacterial BED34_10380 IPR001702 Porin, Gram-negative type BED34_10385 IPR025948 HTH-like domain BED34_10385 IPR001584 Integrase, catalytic core BED34_10385 IPR036397 Ribonuclease H superfamily BED34_10385 IPR012337 Ribonuclease H-like superfamily BED34_10400 IPR032466 Metal-dependent hydrolase BED34_10400 IPR005920 Imidazolonepropionase BED34_10400 IPR011059 Metal-dependent hydrolase, composite domain superfamily BED34_10400 IPR006680 Amidohydrolase-related BED34_10405 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily BED34_10405 IPR010248 Histidine utilization repressor BED34_10405 IPR000524 Transcription regulator HTH, GntR BED34_10405 IPR011663 UbiC transcription regulator-associated BED34_10405 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_10405 IPR036390 Winged helix DNA-binding domain superfamily BED34_10410 IPR023512 Deaminase MtaD/DadD BED34_10410 IPR011059 Metal-dependent hydrolase, composite domain superfamily BED34_10410 IPR006680 Amidohydrolase-related BED34_10410 IPR032466 Metal-dependent hydrolase BED34_10440 IPR036779 LysM domain superfamily BED34_10440 IPR011055 Duplicated hybrid motif BED34_10440 IPR016047 Peptidase M23 BED34_10440 IPR018392 LysM domain BED34_10445 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY BED34_10445 IPR013785 Aldolase-type TIM barrel BED34_10445 IPR000771 Fructose-bisphosphate aldolase, class-II BED34_10445 IPR023788 D-tagatose-bisphosphate aldolase, class II, subunit KbaY BED34_10450 IPR035466 GlmS/AgaS, SIS domain 1 BED34_10450 IPR001347 Sugar isomerase (SIS) BED34_10450 IPR035464 AgaS, SIS domain BED34_10450 IPR014180 Sugar isomerase, AgaS BED34_10455 IPR004701 Phosphotransferase system, mannose-type IIA component BED34_10455 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily BED34_10455 IPR033887 PTS system mannose/sorbose specific IIA subunit BED34_10460 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component BED34_10470 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily BED34_10470 IPR004720 Phosphotransferase system, sorbose subfamily IIB component BED34_10470 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup BED34_10475 IPR023435 D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit KbaZ BED34_10475 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ-like BED34_10475 IPR013785 Aldolase-type TIM barrel BED34_10480 IPR036390 Winged helix DNA-binding domain superfamily BED34_10480 IPR018356 Transcription regulator, HTH DeoR-type, conserved site BED34_10480 IPR014036 DeoR C-terminal sensor domain BED34_10480 IPR001034 DeoR-type HTH domain BED34_10480 IPR037171 NagB/RpiA transferase-like BED34_10480 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_10490 IPR003346 Transposase, IS116/IS110/IS902 BED34_10490 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED34_10500 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain BED34_10500 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F BED34_10500 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site BED34_10500 IPR002942 RNA-binding S4 domain BED34_10500 IPR036986 RNA-binding S4 domain superfamily BED34_10500 IPR006145 Pseudouridine synthase, RsuA/RluA BED34_10500 IPR020103 Pseudouridine synthase, catalytic domain superfamily BED34_10505 IPR004445 Sodium/glutamate symport carrier protein GltS BED34_10515 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED34_10515 IPR003346 Transposase, IS116/IS110/IS902 BED34_10520 IPR003346 Transposase, IS116/IS110/IS902 BED34_10520 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED34_10525 IPR010017 tRNA U34 carboxymethyltransferase BED34_10525 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED34_10525 IPR027555 tRNA (mo5U34)-methyltransferase-like BED34_10530 IPR041698 Methyltransferase domain 25 BED34_10530 IPR005271 Carboxy-S-adenosyl-L-methionine synthase BED34_10530 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED34_10535 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily BED34_10535 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein BED34_10540 IPR002763 Protein of unknown function DUF72 BED34_10540 IPR036520 UPF0759 superfamily BED34_10545 IPR036380 Isochorismatase-like superfamily BED34_10545 IPR000868 Isochorismatase-like BED34_10550 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) BED34_10550 IPR006195 Aminoacyl-tRNA synthetase, class II BED34_10550 IPR004524 Aspartate-tRNA ligase, type 1 BED34_10550 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb BED34_10550 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type BED34_10550 IPR004115 GAD-like domain superfamily BED34_10550 IPR012340 Nucleic acid-binding, OB-fold BED34_10550 IPR029351 GAD domain BED34_10555 IPR003564 Dihydroneopterin triphosphate diphosphatase BED34_10555 IPR020084 NUDIX hydrolase, conserved site BED34_10555 IPR000086 NUDIX hydrolase domain BED34_10555 IPR015797 NUDIX hydrolase-like domain superfamily BED34_10560 IPR026564 Transcriptional regulator TACO1-like, domain 3 BED34_10560 IPR029072 YebC-like BED34_10560 IPR017856 Integrase-like, N-terminal BED34_10560 IPR002876 Transcriptional regulator TACO1-like BED34_10565 IPR012337 Ribonuclease H-like superfamily BED34_10565 IPR036397 Ribonuclease H superfamily BED34_10565 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site BED34_10565 IPR002176 Crossover junction endodeoxyribonuclease RuvC BED34_10570 IPR010994 RuvA domain 2-like BED34_10570 IPR036267 RuvA, C-terminal domain superfamily BED34_10570 IPR011114 Holliday junction DNA helicase RuvA, C-terminal BED34_10570 IPR000085 Bacterial DNA recombination protein RuvA BED34_10570 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial BED34_10570 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 BED34_10570 IPR012340 Nucleic acid-binding, OB-fold BED34_10575 IPR008823 RuvB C-terminal winged helix domain BED34_10575 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_10575 IPR041445 RuvB, AAA lid domain BED34_10575 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_10575 IPR003593 AAA+ ATPase domain BED34_10575 IPR008824 RuvB-like P-loop domain BED34_10575 IPR004605 DNA helicase, Holliday junction RuvB-type BED34_10575 IPR036390 Winged helix DNA-binding domain superfamily BED34_10580 IPR023778 Amino acid/peptide transporter family, dipeptide/tripeptide permease B BED34_10580 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site BED34_10580 IPR000109 Proton-dependent oligopeptide transporter family BED34_10580 IPR036259 MFS transporter superfamily BED34_10580 IPR005279 Dipeptide/tripeptide permease BED34_10585 IPR001626 ABC transporter, TroCD-like BED34_10585 IPR037294 ABC transporter, BtuC-like BED34_10590 IPR003439 ABC transporter-like BED34_10590 IPR003593 AAA+ ATPase domain BED34_10590 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_10590 IPR017882 Zinc import ATP-binding protein ZnuC BED34_10595 IPR035520 High-affinity zinc uptake system protein ZnuA BED34_10595 IPR006127 Periplasmic solute binding protein, ZnuA-like BED34_10600 IPR018392 LysM domain BED34_10600 IPR013731 Opacity-associated protein A, N-terminal BED34_10600 IPR016047 Peptidase M23 BED34_10600 IPR011055 Duplicated hybrid motif BED34_10605 IPR011921 Lipid A biosynthesis myristoyltransferase BED34_10605 IPR004960 Bacterial lipid A biosynthesis acyltransferase BED34_10620 IPR015795 Pyruvate kinase, C-terminal BED34_10620 IPR011037 Pyruvate kinase-like, insert domain superfamily BED34_10620 IPR040442 Pyruvate kinase-like domain superfamily BED34_10620 IPR036918 Pyruvate kinase, C-terminal domain superfamily BED34_10620 IPR018209 Pyruvate kinase, active site BED34_10620 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily BED34_10620 IPR001697 Pyruvate kinase BED34_10620 IPR015806 Pyruvate kinase, insert domain superfamily BED34_10620 IPR015793 Pyruvate kinase, barrel BED34_10625 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_10625 IPR009057 Homeobox-like domain superfamily BED34_10625 IPR001347 Sugar isomerase (SIS) BED34_10625 IPR035472 RpiR-like, SIS domain BED34_10625 IPR000281 Helix-turn-helix protein RpiR BED34_10630 IPR036291 NAD(P)-binding domain superfamily BED34_10630 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal BED34_10630 IPR001282 Glucose-6-phosphate dehydrogenase BED34_10630 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding BED34_10630 IPR019796 Glucose-6-phosphate dehydrogenase, active site BED34_10635 IPR031338 KDPG/KHG aldolase, active site 2 BED34_10635 IPR031337 KDPG/KHG aldolase, active site 1 BED34_10635 IPR013785 Aldolase-type TIM barrel BED34_10635 IPR000887 KDPG/KHG aldolase BED34_10640 IPR023740 Spermidine export protein MdtJ BED34_10640 IPR000390 Small multidrug resistance protein family BED34_10645 IPR023737 Spermidine export protein MdtI BED34_10645 IPR000390 Small multidrug resistance protein family BED34_10650 IPR035709 RutC family, YoaB-like BED34_10650 IPR006175 YjgF/YER057c/UK114 family BED34_10650 IPR035959 RutC-like superfamily BED34_10650 IPR019897 RidA, conserved site BED34_10655 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_10655 IPR006935 Helicase/UvrB, N-terminal BED34_10655 IPR014001 Helicase superfamily 1/2, ATP-binding domain BED34_10655 IPR006555 ATP-dependent helicase, C-terminal BED34_10655 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type BED34_10660 IPR000905 Gcp-like domain BED34_10660 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB BED34_10670 IPR042099 AMP-dependent synthetase-like superfamily BED34_10670 IPR000873 AMP-dependent synthetase/ligase BED34_10670 IPR020845 AMP-binding, conserved site BED34_10670 IPR025110 AMP-binding enzyme, C-terminal domain BED34_10675 IPR002562 3'-5' exonuclease domain BED34_10675 IPR010997 HRDC-like superfamily BED34_10675 IPR036397 Ribonuclease H superfamily BED34_10675 IPR012337 Ribonuclease H-like superfamily BED34_10675 IPR002121 HRDC domain BED34_10675 IPR006292 Ribonuclease D BED34_10680 IPR005527 Cell division topological specificity factor MinE BED34_10680 IPR036707 Cell division topological specificity factor MinE superfamily BED34_10685 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain BED34_10685 IPR010223 ATP binding protein MinD, bacterial-type BED34_10685 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_10685 IPR025501 ATP binding protein MinD BED34_10690 IPR005526 Septum formation inhibitor MinC, C-terminal BED34_10690 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily BED34_10690 IPR013033 Septum formation inhibitor MinC BED34_10690 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal BED34_10690 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily BED34_10690 IPR007874 Septum formation inhibitor MinC, N-terminal BED34_10700 IPR038068 YcgL-like superfamily BED34_10700 IPR027354 YcgL domain BED34_10705 IPR031304 Transglycosylase SLT domain 2 BED34_10705 IPR011757 Lytic transglycosylase MltB BED34_10705 IPR023346 Lysozyme-like domain superfamily BED34_10710 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily BED34_10710 IPR011234 Fumarylacetoacetase-like, C-terminal BED34_10715 IPR008228 Uncharacterised conserved protein UCP006173 BED34_10715 IPR005358 Putative zinc- or iron-chelating domain containing protein BED34_10740 IPR006686 Mechanosensitive ion channel MscS, conserved site BED34_10740 IPR023408 Mechanosensitive ion channel MscS domain superfamily BED34_10740 IPR011066 Mechanosensitive ion channel MscS, C-terminal BED34_10740 IPR010920 LSM domain superfamily BED34_10740 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 BED34_10740 IPR006685 Mechanosensitive ion channel MscS BED34_10745 IPR036282 Glutathione S-transferase, C-terminal domain superfamily BED34_10745 IPR004045 Glutathione S-transferase, N-terminal BED34_10745 IPR034338 Glutathione S-transferases, subfamily 4, C-terminal BED34_10745 IPR036249 Thioredoxin-like superfamily BED34_10745 IPR040079 Glutathione Transferase family BED34_10745 IPR010987 Glutathione S-transferase, C-terminal-like BED34_10765 IPR009950 Protein of unknown function DUF1480 BED34_10795 IPR011701 Major facilitator superfamily BED34_10795 IPR020846 Major facilitator superfamily domain BED34_10795 IPR036259 MFS transporter superfamily BED34_10800 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_10800 IPR005119 LysR, substrate-binding BED34_10800 IPR037417 HTH-type transcriptional regulator SyrM, PBP2 domain BED34_10800 IPR000847 Transcription regulator HTH, LysR BED34_10800 IPR036390 Winged helix DNA-binding domain superfamily BED34_10805 IPR003399 Mce/MlaD BED34_10810 IPR007498 Intermembrane transport protein PqiA-like BED34_10810 IPR011031 Multihaem cytochrome BED34_10810 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type BED34_10815 IPR003018 GAF domain BED34_10815 IPR029016 GAF-like domain superfamily BED34_10815 IPR000614 Free Met sulfoxide reductase conserved site BED34_10820 IPR036442 ProQ/FinO domain superfamily BED34_10820 IPR035236 RNA chaperone ProQ, C-terminal BED34_10820 IPR016103 ProQ/FinO domain BED34_10820 IPR023529 RNA chaperone ProQ BED34_10825 IPR029045 ClpP/crotonase-like domain superfamily BED34_10825 IPR001478 PDZ domain BED34_10825 IPR040573 Tail specific protease, N-terminal domain BED34_10825 IPR036034 PDZ superfamily BED34_10825 IPR004447 C-terminal-processing peptidase S41A BED34_10825 IPR005151 Tail specific protease BED34_10825 IPR020992 Tail specific protease, C-terminal BED34_10830 IPR022919 Peptidase M48, protease HtpX, putative BED34_10830 IPR001915 Peptidase M48 BED34_10845 IPR027946 Oligogalacturonate lyase domain BED34_10845 IPR015943 WD40/YVTN repeat-like-containing domain superfamily BED34_10850 IPR011991 ArsR-like helix-turn-helix domain BED34_10850 IPR014757 Transcription regulator IclR, C-terminal BED34_10850 IPR005471 Transcription regulator IclR, N-terminal BED34_10850 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_10850 IPR036390 Winged helix DNA-binding domain superfamily BED34_10850 IPR029016 GAF-like domain superfamily BED34_10855 IPR002502 N-acetylmuramoyl-L-alanine amidase domain BED34_10855 IPR036365 PGBD-like superfamily BED34_10855 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily BED34_10855 IPR036366 PGBD superfamily BED34_10865 IPR016956 Inner membrane protein YdjM BED34_10865 IPR007404 LexA-binding, inner membrane-associated putative hydrolase BED34_10875 IPR009331 Oligogalacturonate-specific porin BED34_10880 IPR006059 Bacterial extracellular solute-binding protein BED34_10885 IPR003439 ABC transporter-like BED34_10885 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_10885 IPR040582 MalK, OB fold domain BED34_10885 IPR008995 Molybdate/tungstate binding, C-terminal BED34_10885 IPR005116 Transport-associated OB, type 1 BED34_10885 IPR003593 AAA+ ATPase domain BED34_10885 IPR017871 ABC transporter, conserved site BED34_10890 IPR035906 MetI-like superfamily BED34_10890 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED34_10895 IPR035906 MetI-like superfamily BED34_10895 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED34_10900 IPR010702 Periplasmic pectate lyase BED34_10905 IPR036291 NAD(P)-binding domain superfamily BED34_10905 IPR002347 Short-chain dehydrogenase/reductase SDR BED34_10905 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase BED34_10905 IPR020904 Short-chain dehydrogenase/reductase, conserved site BED34_10910 IPR007045 5-keto 4-deoxyuronate isomerase BED34_10910 IPR021120 KduI/IolB isomerase BED34_10910 IPR014710 RmlC-like jelly roll fold BED34_10910 IPR011051 RmlC-like cupin domain superfamily BED34_10910 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal BED34_10915 IPR011051 RmlC-like cupin domain superfamily BED34_10915 IPR014710 RmlC-like jelly roll fold BED34_10915 IPR025499 Pectin degradation protein KdgF BED34_10915 IPR013096 Cupin 2, conserved barrel BED34_10920 IPR001207 Transposase, mutator type BED34_10925 IPR036412 HAD-like superfamily BED34_10925 IPR041492 Haloacid dehalogenase-like hydrolase BED34_10925 IPR023214 HAD superfamily BED34_10925 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BED34_10925 IPR006439 HAD hydrolase, subfamily IA BED34_10930 IPR025229 YniB-like protein BED34_10935 IPR005119 LysR, substrate-binding BED34_10935 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_10935 IPR036390 Winged helix DNA-binding domain superfamily BED34_10935 IPR000847 Transcription regulator HTH, LysR BED34_10940 IPR017821 Succinate CoA transferase BED34_10940 IPR037171 NagB/RpiA transferase-like BED34_10940 IPR003702 Acetyl-CoA hydrolase/transferase BED34_10940 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily BED34_10940 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain BED34_10945 IPR014748 Enoyl-CoA hydratase, C-terminal BED34_10945 IPR001753 Enoyl-CoA hydratase/isomerase BED34_10945 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site BED34_10945 IPR029045 ClpP/crotonase-like domain superfamily BED34_10950 IPR005129 SIMIBI class G3E GTPase, ArgK/MeaB BED34_10950 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_10965 IPR001626 ABC transporter, TroCD-like BED34_10965 IPR037294 ABC transporter, BtuC-like BED34_10970 IPR001626 ABC transporter, TroCD-like BED34_10970 IPR037294 ABC transporter, BtuC-like BED34_10975 IPR003439 ABC transporter-like BED34_10975 IPR017871 ABC transporter, conserved site BED34_10975 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_10975 IPR003593 AAA+ ATPase domain BED34_10980 IPR006127 Periplasmic solute binding protein, ZnuA-like BED34_10980 IPR006129 Adhesin B BED34_10980 IPR006128 Adhesion lipoprotein BED34_10985 IPR008258 Transglycosylase SLT domain 1 BED34_10985 IPR023946 Endo-type membrane-bound lytic murein transglycosylase A BED34_10985 IPR000189 Prokaryotic transglycosylase, active site BED34_10985 IPR023346 Lysozyme-like domain superfamily BED34_10990 IPR002771 Multiple antibiotic resistance (MarC)-related BED34_11015 IPR007563 Protein of unknown function DUF554 BED34_11020 IPR025309 KTSC domain BED34_11025 IPR012676 TGS-like BED34_11025 IPR004095 TGS BED34_11025 IPR012675 Beta-grasp domain superfamily BED34_11025 IPR033728 Threonine-tRNA ligase catalytic core domain BED34_11025 IPR002320 Threonine-tRNA ligase, class IIa BED34_11025 IPR006195 Aminoacyl-tRNA synthetase, class II BED34_11025 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) BED34_11025 IPR004154 Anticodon-binding BED34_11025 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily BED34_11025 IPR012947 Threonyl/alanyl tRNA synthetase, SAD BED34_11025 IPR036621 Anticodon-binding domain superfamily BED34_11030 IPR019813 Translation initiation factor 3, conserved site BED34_11030 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily BED34_11030 IPR001288 Translation initiation factor 3 BED34_11030 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily BED34_11030 IPR019815 Translation initiation factor 3, C-terminal BED34_11030 IPR019814 Translation initiation factor 3, N-terminal BED34_11035 IPR037229 Ribosomal protein L35 superfamily BED34_11035 IPR001706 Ribosomal protein L35, non-mitochondrial BED34_11035 IPR021137 Ribosomal protein L35 BED34_11035 IPR018265 Ribosomal protein L35, conserved site BED34_11040 IPR035566 Ribosomal protein L20, C-terminal BED34_11040 IPR005813 Ribosomal protein L20 BED34_11045 IPR002319 Phenylalanyl-tRNA synthetase BED34_11045 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial BED34_11045 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal BED34_11045 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit BED34_11045 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm BED34_11045 IPR006195 Aminoacyl-tRNA synthetase, class II BED34_11050 IPR009061 Putative DNA-binding domain superfamily BED34_11050 IPR005147 tRNA synthetase, B5-domain BED34_11050 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain BED34_11050 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit BED34_11050 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily BED34_11050 IPR005121 Ferrodoxin-fold anticodon-binding domain BED34_11050 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 BED34_11050 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain BED34_11050 IPR005146 B3/B4 tRNA-binding domain BED34_11050 IPR012340 Nucleic acid-binding, OB-fold BED34_11050 IPR002547 tRNA-binding domain BED34_11055 IPR020816 Histone-like DNA-binding protein, conserved site BED34_11055 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily BED34_11055 IPR000119 Histone-like DNA-binding protein BED34_11055 IPR005684 Integration host factor, alpha subunit BED34_11060 IPR009057 Homeobox-like domain superfamily BED34_11060 IPR038717 Tc1-like transposase, DDE domain BED34_11060 IPR012337 Ribonuclease H-like superfamily BED34_11060 IPR025959 Winged helix-turn helix domain BED34_11070 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC BED34_11070 IPR000522 ABC transporter, permease protein, BtuC-like BED34_11070 IPR037294 ABC transporter, BtuC-like BED34_11075 IPR000889 Glutathione peroxidase BED34_11075 IPR029759 Glutathione peroxidase active site BED34_11075 IPR036249 Thioredoxin-like superfamily BED34_11075 IPR033674 Thioredoxin/glutathione peroxidase BtuE BED34_11075 IPR029760 Glutathione peroxidase conserved site BED34_11080 IPR003593 AAA+ ATPase domain BED34_11080 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_11080 IPR017871 ABC transporter, conserved site BED34_11080 IPR003439 ABC transporter-like BED34_11080 IPR023693 ABC transporter, vitamin B12, BtuD BED34_11085 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED34_11085 IPR022850 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase, ArnB BED34_11085 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED34_11085 IPR015424 Pyridoxal phosphate-dependent transferase BED34_11085 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase BED34_11090 IPR029044 Nucleotide-diphospho-sugar transferases BED34_11090 IPR001173 Glycosyltransferase 2-like BED34_11090 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase BED34_11095 IPR001509 NAD-dependent epimerase/dehydratase BED34_11095 IPR021168 Bifunctional polymyxin resistance protein, ArnA BED34_11095 IPR002376 Formyl transferase, N-terminal BED34_11095 IPR036477 Formyl transferase, N-terminal domain superfamily BED34_11095 IPR011034 Formyl transferase-like, C-terminal domain superfamily BED34_11095 IPR036291 NAD(P)-binding domain superfamily BED34_11095 IPR005793 Formyl transferase, C-terminal BED34_11100 IPR023557 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD, probable BED34_11100 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel BED34_11100 IPR002509 NodB homology domain BED34_11105 IPR003342 Glycosyl transferase family 39/83 BED34_11105 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase BED34_11110 IPR000390 Small multidrug resistance protein family BED34_11110 IPR022883 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase, subunit ArnE BED34_11110 IPR000620 EamA domain BED34_11115 IPR022832 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF BED34_11115 IPR000390 Small multidrug resistance protein family BED34_11120 IPR038765 Papain-like cysteine peptidase superfamily BED34_11120 IPR000064 Endopeptidase, NLPC/P60 domain BED34_11130 IPR003846 Protein adenylyltransferase SelO BED34_11145 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BED34_11145 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor BED34_11145 IPR012910 TonB-dependent receptor, plug domain BED34_11145 IPR011276 TonB-dependent haem/haemoglobin receptor BED34_11145 IPR037066 TonB-dependent receptor, plug domain superfamily BED34_11145 IPR000531 TonB-dependent receptor-like, beta-barrel BED34_11145 IPR039426 Vitamin B12 transporter BtuB-like BED34_11145 IPR010916 TonB box, conserved site BED34_11150 IPR019600 Hemin uptake protein HemP BED34_11155 IPR006218 DAHP synthetase I/KDSA BED34_11155 IPR013785 Aldolase-type TIM barrel BED34_11155 IPR006219 DHAP synthase, class 1 BED34_11160 IPR026530 Phosphoenolpyruvate synthase regulatory protein BED34_11160 IPR008917 Transcription factor, Skn-1-like, DNA-binding domain superfamily BED34_11160 IPR005177 Bifunctional kinase-pyrophosphorylase BED34_11165 IPR023151 PEP-utilising enzyme, conserved site BED34_11165 IPR036637 Phosphohistidine domain superfamily BED34_11165 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding BED34_11165 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily BED34_11165 IPR006319 Phosphoenolpyruvate synthase BED34_11165 IPR008279 PEP-utilising enzyme, mobile domain BED34_11165 IPR040442 Pyruvate kinase-like domain superfamily BED34_11165 IPR000121 PEP-utilising enzyme, C-terminal BED34_11165 IPR018274 PEP-utilising enzyme, active site BED34_11165 IPR013815 ATP-grasp fold, subdomain 1 BED34_11175 IPR002549 Transmembrane protein TqsA-like BED34_11180 IPR016166 FAD-binding domain, PCMH-type BED34_11180 IPR036318 FAD-binding, type PCMH-like superfamily BED34_11180 IPR009051 Alpha-helical ferredoxin BED34_11180 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BED34_11180 IPR016164 FAD-linked oxidase-like, C-terminal BED34_11180 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BED34_11180 IPR004113 FAD-linked oxidase, C-terminal BED34_11180 IPR006094 FAD linked oxidase, N-terminal BED34_11185 IPR030863 1,4-dihydroxy-2-naphthoyl-CoA hydrolase, MenI BED34_11185 IPR003736 Phenylacetic acid degradation-related domain BED34_11185 IPR029069 HotDog domain superfamily BED34_11185 IPR006683 Thioesterase domain BED34_11190 IPR016092 FeS cluster insertion protein BED34_11190 IPR011298 FeS assembly scaffold SufA BED34_11190 IPR017870 FeS cluster insertion, C-terminal, conserved site BED34_11190 IPR035903 HesB-like domain superfamily BED34_11190 IPR000361 FeS cluster biogenesis BED34_11195 IPR010231 SUF system FeS cluster assembly, SufB BED34_11195 IPR000825 SUF system FeS cluster assembly, SufBD BED34_11195 IPR037284 SUF system FeS cluster assembly, SufBD superfamily BED34_11200 IPR003593 AAA+ ATPase domain BED34_11200 IPR003439 ABC transporter-like BED34_11200 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_11200 IPR010230 FeS cluster assembly SUF system, ATPase SufC BED34_11200 IPR017871 ABC transporter, conserved site BED34_11205 IPR037284 SUF system FeS cluster assembly, SufBD superfamily BED34_11205 IPR000825 SUF system FeS cluster assembly, SufBD BED34_11205 IPR011542 SUF system FeS cluster assembly, SufD BED34_11210 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED34_11210 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED34_11210 IPR000192 Aminotransferase class V domain BED34_11210 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site BED34_11210 IPR010970 Cysteine desulfurase, SufS BED34_11210 IPR015424 Pyridoxal phosphate-dependent transferase BED34_11215 IPR003808 Fe-S metabolism associated domain, SufE-like BED34_11215 IPR023939 Cysteine desulfuration protein SufE BED34_11220 IPR038063 L,D-transpeptidase catalytic domain-like BED34_11220 IPR018392 LysM domain BED34_11220 IPR041597 L,D-transpeptidase C-terminal domain BED34_11220 IPR005490 L,D-transpeptidase catalytic domain BED34_11225 IPR006817 Lipoprotein leucine-zipper BED34_11225 IPR016367 Murein-lipoprotein BED34_11230 IPR015793 Pyruvate kinase, barrel BED34_11230 IPR001697 Pyruvate kinase BED34_11230 IPR018209 Pyruvate kinase, active site BED34_11230 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily BED34_11230 IPR040442 Pyruvate kinase-like domain superfamily BED34_11230 IPR036918 Pyruvate kinase, C-terminal domain superfamily BED34_11230 IPR015806 Pyruvate kinase, insert domain superfamily BED34_11230 IPR015795 Pyruvate kinase, C-terminal BED34_11230 IPR011037 Pyruvate kinase-like, insert domain superfamily BED34_11250 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily BED34_11250 IPR001783 Lumazine-binding protein BED34_11250 IPR017938 Riboflavin synthase-like beta-barrel BED34_11250 IPR026017 Lumazine-binding domain BED34_11255 IPR003333 Mycolic acid cyclopropane synthase BED34_11255 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED34_11260 IPR020846 Major facilitator superfamily domain BED34_11260 IPR036259 MFS transporter superfamily BED34_11260 IPR011701 Major facilitator superfamily BED34_11260 IPR004812 Drug resistance transporter Bcr/CmlA subfamily BED34_11265 IPR000847 Transcription regulator HTH, LysR BED34_11265 IPR005119 LysR, substrate-binding BED34_11265 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_11265 IPR036390 Winged helix DNA-binding domain superfamily BED34_11270 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BED34_11270 IPR000843 LacI-type HTH domain BED34_11270 IPR028082 Periplasmic binding protein-like I BED34_11270 IPR023588 Transcription regulator HTH, PurR BED34_11275 IPR019832 Manganese/iron superoxide dismutase, C-terminal BED34_11275 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily BED34_11275 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily BED34_11275 IPR019831 Manganese/iron superoxide dismutase, N-terminal BED34_11275 IPR001189 Manganese/iron superoxide dismutase BED34_11275 IPR019833 Manganese/iron superoxide dismutase, binding site BED34_11280 IPR038765 Papain-like cysteine peptidase superfamily BED34_11280 IPR000064 Endopeptidase, NLPC/P60 domain BED34_11285 IPR033658 Glutaredoxin, PICOT-like BED34_11285 IPR014434 Monothiol glutaredoxin BED34_11285 IPR004480 Monothiol glutaredoxin-related BED34_11285 IPR036249 Thioredoxin-like superfamily BED34_11285 IPR002109 Glutaredoxin BED34_11290 IPR013520 Exonuclease, RNase T/DNA polymerase III BED34_11290 IPR005987 Ribonuclease T BED34_11290 IPR036397 Ribonuclease H superfamily BED34_11290 IPR012337 Ribonuclease H-like superfamily BED34_11300 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BED34_11300 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BED34_11300 IPR004361 Glyoxalase I BED34_11300 IPR018146 Glyoxalase I, conserved site BED34_11300 IPR037523 Vicinal oxygen chelate (VOC) domain BED34_11310 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BED34_11310 IPR001647 DNA-binding HTH domain, TetR-type BED34_11310 IPR009057 Homeobox-like domain superfamily BED34_11310 IPR011075 Tetracyclin repressor-like, C-terminal domain BED34_11315 IPR000917 Sulfatase, N-terminal BED34_11315 IPR012549 Phosphoethanolamine transferase, N-terminal BED34_11315 IPR017850 Alkaline-phosphatase-like, core domain superfamily BED34_11315 IPR040423 Phosphoethanolamine transferase BED34_11320 IPR010710 Protein of unknown function DUF1289 BED34_11325 IPR036812 NADP-dependent oxidoreductase domain superfamily BED34_11325 IPR023210 NADP-dependent oxidoreductase domain BED34_11325 IPR020471 Aldo/keto reductase BED34_11330 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein BED34_11340 IPR012451 Protein of unknown function DUF1656 BED34_11345 IPR000835 MarR-type HTH domain BED34_11345 IPR036390 Winged helix DNA-binding domain superfamily BED34_11345 IPR023187 Transcriptional regulator MarR-type, conserved site BED34_11345 IPR023071 Transcriptional regulator, SlyA BED34_11345 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_11350 IPR008816 Glycine zipper 2TM domain BED34_11355 IPR005338 Anhydro-N-acetylmuramic acid kinase BED34_11360 IPR036328 C-type lysozyme inhibitor superfamily BED34_11360 IPR018660 C-type lysozyme inhibitor BED34_11365 IPR000659 Pyridoxamine 5'-phosphate oxidase BED34_11365 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal BED34_11365 IPR012349 FMN-binding split barrel BED34_11365 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site BED34_11365 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative BED34_11370 IPR036986 RNA-binding S4 domain superfamily BED34_11370 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED34_11370 IPR024088 Tyrosine-tRNA ligase, bacterial-type BED34_11370 IPR002307 Tyrosine-tRNA ligase BED34_11370 IPR002942 RNA-binding S4 domain BED34_11370 IPR002305 Aminoacyl-tRNA synthetase, class Ic BED34_11370 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 BED34_11370 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site BED34_11380 IPR010987 Glutathione S-transferase, C-terminal-like BED34_11380 IPR036249 Thioredoxin-like superfamily BED34_11380 IPR004046 Glutathione S-transferase, C-terminal BED34_11380 IPR036282 Glutathione S-transferase, C-terminal domain superfamily BED34_11380 IPR004045 Glutathione S-transferase, N-terminal BED34_11380 IPR040079 Glutathione Transferase family BED34_11385 IPR020317 Uncharacterised protein family YjbD BED34_11390 IPR006977 Yip1 domain BED34_11400 IPR003346 Transposase, IS116/IS110/IS902 BED34_11400 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED34_11405 IPR036259 MFS transporter superfamily BED34_11405 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site BED34_11405 IPR000109 Proton-dependent oligopeptide transporter family BED34_11405 IPR005279 Dipeptide/tripeptide permease BED34_11405 IPR023517 Amino acid/peptide transporter family, dipeptide and tripeptide permease A BED34_11410 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_11410 IPR036390 Winged helix DNA-binding domain superfamily BED34_11410 IPR000847 Transcription regulator HTH, LysR BED34_11410 IPR005119 LysR, substrate-binding BED34_11415 IPR029032 AhpD-like BED34_11425 IPR003439 ABC transporter-like BED34_11425 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_11425 IPR003593 AAA+ ATPase domain BED34_11425 IPR017871 ABC transporter, conserved site BED34_11430 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_11430 IPR003439 ABC transporter-like BED34_11430 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal BED34_11430 IPR003593 AAA+ ATPase domain BED34_11435 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED34_11435 IPR025966 Oligopeptide transport permease C-like, N-terminal domain BED34_11435 IPR035906 MetI-like superfamily BED34_11440 IPR035906 MetI-like superfamily BED34_11440 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED34_11445 IPR039424 Solute-binding protein family 5 BED34_11445 IPR023765 Solute-binding protein family 5, conserved site BED34_11445 IPR030678 Peptide/nickel binding protein, MppA-type BED34_11445 IPR000914 Solute-binding protein family 5 domain BED34_11460 IPR025944 Sigma-54 interaction domain, conserved site BED34_11460 IPR014317 Transcription activator PspF BED34_11460 IPR003593 AAA+ ATPase domain BED34_11460 IPR009057 Homeobox-like domain superfamily BED34_11460 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BED34_11460 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_11460 IPR002078 RNA polymerase sigma factor 54 interaction domain BED34_11460 IPR002197 DNA binding HTH domain, Fis-type BED34_11465 IPR014319 Phage shock protein, PspA BED34_11465 IPR007157 PspA/IM30 BED34_11470 IPR009554 Phage shock protein B BED34_11475 IPR007168 Phage shock protein, PspC, N-terminal BED34_11475 IPR014320 Phage shock protein, PspC BED34_11485 IPR007413 Protein of unknown function DUF463, YcjX-like protein BED34_11490 IPR021147 Protein of unknown function DUF697 BED34_11490 IPR006507 Uncharacterised protein family UPF0283 BED34_11505 IPR009057 Homeobox-like domain superfamily BED34_11505 IPR003593 AAA+ ATPase domain BED34_11505 IPR002912 ACT domain BED34_11505 IPR000014 PAS domain BED34_11505 IPR030828 TyrR family, helix-turn-helix domain BED34_11505 IPR002078 RNA polymerase sigma factor 54 interaction domain BED34_11505 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BED34_11505 IPR025944 Sigma-54 interaction domain, conserved site BED34_11505 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_11505 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BED34_11505 IPR035965 PAS domain superfamily BED34_11510 IPR013766 Thioredoxin domain BED34_11510 IPR018219 Thiol peroxidase conserved site BED34_11510 IPR036249 Thioredoxin-like superfamily BED34_11510 IPR013740 Redoxin BED34_11510 IPR002065 Thiol peroxidase Tpx BED34_11515 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain BED34_11515 IPR036849 Enolase-like, C-terminal domain superfamily BED34_11515 IPR034603 Dipeptide epimerase BED34_11515 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site BED34_11515 IPR029065 Enolase C-terminal domain-like BED34_11515 IPR029017 Enolase-like, N-terminal BED34_11515 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal BED34_11520 IPR000834 Peptidase M14, carboxypeptidase A BED34_11525 IPR030678 Peptide/nickel binding protein, MppA-type BED34_11525 IPR000914 Solute-binding protein family 5 domain BED34_11525 IPR023765 Solute-binding protein family 5, conserved site BED34_11525 IPR039424 Solute-binding protein family 5 BED34_11530 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB BED34_11530 IPR023714 Zinc transport protein ZntB BED34_11535 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type BED34_11535 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED34_11535 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal BED34_11535 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase BED34_11540 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily BED34_11540 IPR000909 Phosphatidylinositol-specific phospholipase C, X domain BED34_11550 IPR000390 Small multidrug resistance protein family BED34_11555 IPR003416 MgtC/SapB/SrpB/YhiD family BED34_11560 IPR005590 Protein of unknown function DUF333 BED34_11565 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain BED34_11565 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 BED34_11565 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site BED34_11565 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BED34_11565 IPR036291 NAD(P)-binding domain superfamily BED34_11570 IPR021730 Dicarboxylate transport BED34_11575 IPR025985 YnbE-like lipoprotein BED34_11580 IPR008309 Uncharacterised conserved protein UCP025560 BED34_11585 IPR003680 Flavodoxin-like fold BED34_11585 IPR023048 NADH-azoreductase, FMN-dependent BED34_11585 IPR029039 Flavoprotein-like superfamily BED34_11590 IPR007502 Helicase-associated domain BED34_11590 IPR014001 Helicase superfamily 1/2, ATP-binding domain BED34_11590 IPR001650 Helicase, C-terminal BED34_11590 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_11590 IPR010222 RNA helicase HrpA BED34_11590 IPR003593 AAA+ ATPase domain BED34_11590 IPR024590 RNA helicase HrpA, C-terminal BED34_11590 IPR011545 DEAD/DEAH box helicase domain BED34_11590 IPR011709 Domain of unknown function DUF1605 BED34_11605 IPR009003 Peptidase S1, PA clan BED34_11605 IPR001254 Serine proteases, trypsin domain BED34_11605 IPR018114 Serine proteases, trypsin family, histidine active site BED34_11605 IPR033116 Serine proteases, trypsin family, serine active site BED34_11605 IPR008256 Peptidase S1B BED34_11615 IPR001333 Peptidase M32, carboxypeptidase Taq BED34_11620 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BED34_11620 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BED34_11620 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BED34_11620 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BED34_11620 IPR005467 Histidine kinase domain BED34_11620 IPR003594 Histidine kinase/HSP90-like ATPase BED34_11620 IPR003660 HAMP domain BED34_11625 IPR001789 Signal transduction response regulator, receiver domain BED34_11625 IPR016032 Signal transduction response regulator, C-terminal effector BED34_11625 IPR001867 OmpR/PhoB-type DNA-binding domain BED34_11625 IPR039420 Transcriptional regulatory protein WalR-like BED34_11625 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_11625 IPR011006 CheY-like superfamily BED34_11635 IPR004754 Amino acid antiporter BED34_11635 IPR002293 Amino acid/polyamine transporter I BED34_11640 IPR025539 YdgH protein BED34_11640 IPR036275 YdgH-like superfamily BED34_11640 IPR010854 Domain of unknown function DUF1471 BED34_11640 IPR025543 Dodecin-like BED34_11650 IPR036291 NAD(P)-binding domain superfamily BED34_11650 IPR026255 NAD(P) transhydrogenase, alpha subunit BED34_11650 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal BED34_11650 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal BED34_11650 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 BED34_11650 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 BED34_11650 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain BED34_11655 IPR029035 DHS-like NAD/FAD-binding domain superfamily BED34_11655 IPR034300 NADP transhydrogenase beta-like domain BED34_11655 IPR012136 NADP transhydrogenase, beta subunit BED34_11660 IPR006016 UspA BED34_11665 IPR036390 Winged helix DNA-binding domain superfamily BED34_11665 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_11665 IPR000595 Cyclic nucleotide-binding domain BED34_11665 IPR018335 Transcription regulator HTH, Crp-type, conserved site BED34_11665 IPR012318 Crp-type HTH domain BED34_11665 IPR018490 Cyclic nucleotide-binding-like BED34_11665 IPR014710 RmlC-like jelly roll fold BED34_11670 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site BED34_11670 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain BED34_11670 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_11670 IPR023546 Methylated-DNA--protein-cysteine methyltransferase BED34_11670 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily BED34_11670 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding BED34_11670 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain BED34_11685 IPR024911 DNA gyrase inhibitor GyrI BED34_11685 IPR011256 Regulatory factor, effector binding domain superfamily BED34_11685 IPR029442 GyrI-like small molecule binding domain BED34_11685 IPR010499 Bacterial transcription activator, effector binding BED34_11690 IPR036291 NAD(P)-binding domain superfamily BED34_11690 IPR002347 Short-chain dehydrogenase/reductase SDR BED34_11690 IPR020904 Short-chain dehydrogenase/reductase, conserved site BED34_11715 IPR023214 HAD superfamily BED34_11715 IPR041492 Haloacid dehalogenase-like hydrolase BED34_11715 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB BED34_11715 IPR006439 HAD hydrolase, subfamily IA BED34_11715 IPR036412 HAD-like superfamily BED34_11715 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BED34_11720 IPR039557 AHAS, ACT domain BED34_11720 IPR002912 ACT domain BED34_11720 IPR004789 Acetolactate synthase, small subunit BED34_11725 IPR012846 Acetolactate synthase, large subunit, biosynthetic BED34_11725 IPR039368 Acetolactate synthase large subunit, TPP binding domain BED34_11725 IPR029035 DHS-like NAD/FAD-binding domain superfamily BED34_11725 IPR029061 Thiamin diphosphate-binding fold BED34_11725 IPR000399 TPP-binding enzyme, conserved site BED34_11725 IPR012000 Thiamine pyrophosphate enzyme, central domain BED34_11725 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain BED34_11725 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding BED34_11735 IPR002502 N-acetylmuramoyl-L-alanine amidase domain BED34_11735 IPR036365 PGBD-like superfamily BED34_11735 IPR036366 PGBD superfamily BED34_11735 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily BED34_11775 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_11775 IPR000847 Transcription regulator HTH, LysR BED34_11775 IPR036390 Winged helix DNA-binding domain superfamily BED34_11775 IPR005119 LysR, substrate-binding BED34_11780 IPR020846 Major facilitator superfamily domain BED34_11780 IPR005829 Sugar transporter, conserved site BED34_11780 IPR036259 MFS transporter superfamily BED34_11780 IPR011701 Major facilitator superfamily BED34_11790 IPR023650 Beta-lactamase, class-A active site BED34_11790 IPR000871 Beta-lactamase, class-A BED34_11790 IPR012338 Beta-lactamase/transpeptidase-like BED34_11795 IPR036381 Replication terminator Tus, domain 1 BED34_11795 IPR008865 DNA replication terminus site-binding protein BED34_11795 IPR036384 Replication terminator Tus superfamily BED34_11805 IPR005677 Fumarate hydratase, class II BED34_11805 IPR024083 Fumarase/histidase, N-terminal BED34_11805 IPR000362 Fumarate lyase family BED34_11805 IPR018951 Fumarase C, C-terminal BED34_11805 IPR020557 Fumarate lyase, conserved site BED34_11805 IPR022761 Fumarate lyase, N-terminal BED34_11805 IPR008948 L-Aspartase-like BED34_11810 IPR016305 Mannose-6-phosphate isomerase BED34_11810 IPR001250 Mannose-6-phosphate isomerase, type I BED34_11810 IPR014710 RmlC-like jelly roll fold BED34_11810 IPR011051 RmlC-like cupin domain superfamily BED34_11810 IPR018050 Phosphomannose isomerase, type I, conserved site BED34_11815 IPR010352 Protein of unknown function DUF945 BED34_11825 IPR000843 LacI-type HTH domain BED34_11825 IPR028082 Periplasmic binding protein-like I BED34_11825 IPR001761 Periplasmic binding protein/LacI sugar binding domain BED34_11825 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BED34_11830 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component BED34_11830 IPR003352 Phosphotransferase system, EIIC BED34_11830 IPR011301 PTS system, maltose/glucose-specific IIBC component BED34_11830 IPR036878 Glucose permease domain IIB BED34_11830 IPR001996 Phosphotransferase system, IIB component, type 1 BED34_11830 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site BED34_11830 IPR013013 Phosphotransferase system, EIIC component, type 1 BED34_11835 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED34_11835 IPR004839 Aminotransferase, class I/classII BED34_11835 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED34_11835 IPR027619 Putative C-S lyase BED34_11835 IPR015424 Pyridoxal phosphate-dependent transferase BED34_11840 IPR028893 Adenosine deaminase BED34_11840 IPR006330 Adenosine/adenine deaminase BED34_11840 IPR032466 Metal-dependent hydrolase BED34_11840 IPR001365 Adenosine/AMP deaminase domain BED34_11840 IPR006650 Adenosine/AMP deaminase active site BED34_11845 IPR038770 Sodium/solute symporter superfamily BED34_11845 IPR016833 Putative sodium bile acid cotransporter BED34_11850 IPR000683 Oxidoreductase, N-terminal BED34_11850 IPR036291 NAD(P)-binding domain superfamily BED34_11850 IPR004104 Oxidoreductase, C-terminal BED34_11855 IPR020449 Transcription regulator HTH, AraC- type BED34_11855 IPR003313 AraC-type arabinose-binding/dimerisation domain BED34_11855 IPR037923 Transcription regulator HTH-like BED34_11855 IPR018060 DNA binding HTH domain, AraC-type BED34_11855 IPR018062 HTH domain AraC-type, conserved site BED34_11855 IPR009057 Homeobox-like domain superfamily BED34_11865 IPR017871 ABC transporter, conserved site BED34_11865 IPR017917 ABC transporter, arabinose import, ATP-binding protein, AraG BED34_11865 IPR003439 ABC transporter-like BED34_11865 IPR003593 AAA+ ATPase domain BED34_11865 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_11870 IPR026266 L-arabinose-binding periplasmic protein BED34_11870 IPR001761 Periplasmic binding protein/LacI sugar binding domain BED34_11870 IPR028082 Periplasmic binding protein-like I BED34_11875 IPR018485 Carbohydrate kinase, FGGY, C-terminal BED34_11875 IPR005929 Ribulokinase BED34_11880 IPR003762 L-arabinose isomerase BED34_11880 IPR009015 L-fucose isomerase, N-terminal/central domain superfamily BED34_11880 IPR004216 L-fucose/L-arabinose isomerase, C-terminal BED34_11880 IPR038583 L-arabinose isomerase, N-terminal domain superfamily BED34_11880 IPR024664 L-arabinose isomerase, C-terminal BED34_11890 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_11890 IPR001238 DNA-binding, RecF BED34_11890 IPR018078 DNA-binding, RecF, conserved site BED34_11890 IPR003395 RecF/RecN/SMC, N-terminal BED34_11890 IPR042174 DNA-binding RecF, domain 2 BED34_11900 IPR006144 Secretion protein HlyD, conserved site BED34_11900 IPR010129 Type I secretion membrane fusion protein, HlyD family BED34_11915 IPR019690 Protein of unknown function DUF2569 BED34_11920 IPR003667 NqrDE/RnfAE BED34_11920 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA BED34_11925 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BED34_11925 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BED34_11925 IPR011005 Dihydropteroate synthase-like BED34_11925 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB BED34_11925 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria BED34_11925 IPR007202 4Fe-4S domain BED34_11930 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BED34_11930 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BED34_11930 IPR009051 Alpha-helical ferredoxin BED34_11930 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain BED34_11930 IPR026902 RnfC Barrel sandwich hybrid domain BED34_11930 IPR019554 Soluble ligand binding domain BED34_11930 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC BED34_11930 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily BED34_11940 IPR011256 Regulatory factor, effector binding domain superfamily BED34_11940 IPR029442 GyrI-like small molecule binding domain BED34_11940 IPR010499 Bacterial transcription activator, effector binding BED34_11940 IPR018062 HTH domain AraC-type, conserved site BED34_11940 IPR018060 DNA binding HTH domain, AraC-type BED34_11940 IPR020449 Transcription regulator HTH, AraC- type BED34_11940 IPR009057 Homeobox-like domain superfamily BED34_11945 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D BED34_11945 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD BED34_11950 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG BED34_11950 IPR007329 FMN-binding BED34_11955 IPR003667 NqrDE/RnfAE BED34_11955 IPR010968 Ion-translocating oxidoreductase complex subunit E BED34_11960 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif BED34_11960 IPR004036 Endonuclease III-like, conserved site-2 BED34_11960 IPR005759 Endonuclease III BED34_11960 IPR003265 HhH-GPD domain BED34_11960 IPR011257 DNA glycosylase BED34_11960 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal BED34_11960 IPR004035 Endonuclease III, iron-sulphur binding site BED34_11960 IPR000445 Helix-hairpin-helix motif BED34_12035 IPR020084 NUDIX hydrolase, conserved site BED34_12035 IPR015797 NUDIX hydrolase-like domain superfamily BED34_12035 IPR000086 NUDIX hydrolase domain BED34_12035 IPR020476 NUDIX hydrolase BED34_12060 IPR004929 Spanin, inner membrane subunit BED34_12125 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein BED34_12125 IPR002611 IstB-like ATP-binding protein BED34_12125 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_12150 IPR001387 Cro/C1-type helix-turn-helix domain BED34_12150 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BED34_12150 IPR039418 LexA-like BED34_12150 IPR015927 Peptidase S24/S26A/S26B/S26C BED34_12150 IPR036286 LexA/Signal peptidase-like superfamily BED34_12205 IPR024432 Putative exodeoxyribonuclease 8, PDDEXK-like domain BED34_12205 IPR010584 Exodeoxyribonuclease 8 BED34_12225 IPR011129 Cold shock domain BED34_12225 IPR013223 Ribonuclease B, N-terminal OB domain BED34_12225 IPR011804 Ribonuclease II BED34_12225 IPR022966 Ribonuclease II/R, conserved site BED34_12225 IPR001900 Ribonuclease II/R BED34_12225 IPR012340 Nucleic acid-binding, OB-fold BED34_12225 IPR003029 S1 domain BED34_12225 IPR004476 Ribonuclease II/ribonuclease R BED34_12230 IPR003706 CstA, N-terminal domain BED34_12230 IPR025299 CstA, C-terminal domain BED34_12235 IPR007423 Selenoprotein, putative BED34_12240 IPR023001 Fructose-6-phosphate aldolase BED34_12240 IPR001585 Transaldolase/Fructose-6-phosphate aldolase BED34_12240 IPR013785 Aldolase-type TIM barrel BED34_12240 IPR018225 Transaldolase, active site BED34_12240 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase BED34_12240 IPR033919 Transaldolase/Fructose-6-phosphate aldolase, archaeal/bacterial BED34_12245 IPR014036 DeoR C-terminal sensor domain BED34_12245 IPR001034 DeoR-type HTH domain BED34_12245 IPR037171 NagB/RpiA transferase-like BED34_12245 IPR018356 Transcription regulator, HTH DeoR-type, conserved site BED34_12245 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_12245 IPR036390 Winged helix DNA-binding domain superfamily BED34_12255 IPR033748 L-ribulose-5-phosphate 4-epimerase AraD BED34_12255 IPR004661 L-ribulose-5-phosphate 4-epimerase BED34_12255 IPR036409 Class II aldolase/adducin N-terminal domain superfamily BED34_12255 IPR001303 Class II aldolase/adducin N-terminal BED34_12260 IPR008816 Glycine zipper 2TM domain BED34_12265 IPR036877 SUI1 domain superfamily BED34_12265 IPR001950 SUI1 domain BED34_12265 IPR005872 Archaeal/bacterial translation initiation factor SUI1 BED34_12270 IPR018089 Orotidine 5'-phosphate decarboxylase, active site BED34_12270 IPR013785 Aldolase-type TIM barrel BED34_12270 IPR011060 Ribulose-phosphate binding barrel BED34_12270 IPR014732 Orotidine 5'-phosphate decarboxylase BED34_12270 IPR001754 Orotidine 5'-phosphate decarboxylase domain BED34_12275 IPR036275 YdgH-like superfamily BED34_12275 IPR010854 Domain of unknown function DUF1471 BED34_12275 IPR025543 Dodecin-like BED34_12280 IPR004711 Benzoate transporter BED34_12285 IPR013096 Cupin 2, conserved barrel BED34_12285 IPR001387 Cro/C1-type helix-turn-helix domain BED34_12285 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BED34_12285 IPR014710 RmlC-like jelly roll fold BED34_12285 IPR011051 RmlC-like cupin domain superfamily BED34_12295 IPR030865 Lipopolysaccharide assembly protein B BED34_12295 IPR013026 Tetratricopeptide repeat-containing domain BED34_12295 IPR011990 Tetratricopeptide-like helical domain superfamily BED34_12295 IPR019734 Tetratricopeptide repeat BED34_12295 IPR041166 LapB, rubredoxin metal binding domain BED34_12300 IPR032906 Lipopolysaccharide assembly protein A BED34_12300 IPR010445 Lipopolysaccharide assembly protein A domain BED34_12305 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BED34_12305 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily BED34_12310 IPR032677 GTP cyclohydrolase II BED34_12310 IPR000926 GTP cyclohydrolase II, RibA BED34_12310 IPR036144 RibA-like superfamily BED34_12315 IPR036008 Aconitase, iron-sulfur domain BED34_12315 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain BED34_12315 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel BED34_12315 IPR006249 Aconitase/Iron-responsive element-binding protein 2 BED34_12315 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 BED34_12315 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain BED34_12315 IPR018136 Aconitase family, 4Fe-4S cluster binding site BED34_12325 IPR005119 LysR, substrate-binding BED34_12325 IPR000847 Transcription regulator HTH, LysR BED34_12325 IPR036390 Winged helix DNA-binding domain superfamily BED34_12325 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_12330 IPR003602 DNA topoisomerase, type IA, DNA-binding domain BED34_12330 IPR003601 DNA topoisomerase, type IA, domain 2 BED34_12330 IPR023406 DNA topoisomerase, type IA, active site BED34_12330 IPR013497 DNA topoisomerase, type IA, central BED34_12330 IPR013498 DNA topoisomerase, type IA, zn finger BED34_12330 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 BED34_12330 IPR023405 DNA topoisomerase, type IA, core domain BED34_12330 IPR000380 DNA topoisomerase, type IA BED34_12330 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type BED34_12330 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 BED34_12330 IPR028612 DNA topoisomerase I, type IA BED34_12330 IPR006171 TOPRIM domain BED34_12330 IPR034149 DNA topoisomerase 1, TOPRIM domain BED34_12330 IPR005733 DNA topoisomerase I, bacterial-type BED34_12330 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 BED34_12335 IPR038191 YciN superfamily BED34_12335 IPR019633 Protein of unknown function DUF2498 BED34_12340 IPR029045 ClpP/crotonase-like domain superfamily BED34_12340 IPR002142 Peptidase S49 BED34_12340 IPR013703 Peptidase S49, N-terminal proteobacteria BED34_12345 IPR002347 Short-chain dehydrogenase/reductase SDR BED34_12345 IPR020904 Short-chain dehydrogenase/reductase, conserved site BED34_12345 IPR036291 NAD(P)-binding domain superfamily BED34_12350 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain BED34_12350 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_12350 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR BED34_12360 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F BED34_12360 IPR002942 RNA-binding S4 domain BED34_12360 IPR036986 RNA-binding S4 domain superfamily BED34_12360 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site BED34_12360 IPR006145 Pseudouridine synthase, RsuA/RluA BED34_12360 IPR020103 Pseudouridine synthase, catalytic domain superfamily BED34_12365 IPR006070 YrdC-like domain BED34_12365 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily BED34_12370 IPR016195 Polymerase/histidinol phosphatase-like BED34_12370 IPR003141 Polymerase/histidinol phosphatase, N-terminal BED34_12370 IPR004013 PHP domain BED34_12375 IPR019999 Anthranilate synthase component I-like BED34_12375 IPR005801 ADC synthase BED34_12375 IPR015890 Chorismate-utilising enzyme, C-terminal BED34_12375 IPR006805 Anthranilate synthase component I, N-terminal BED34_12375 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial BED34_12380 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain BED34_12380 IPR017926 Glutamine amidotransferase BED34_12380 IPR029062 Class I glutamine amidotransferase-like BED34_12385 IPR000312 Glycosyl transferase, family 3 BED34_12385 IPR017459 Glycosyl transferase family 3, N-terminal domain BED34_12385 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily BED34_12385 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily BED34_12385 IPR005940 Anthranilate phosphoribosyl transferase BED34_12390 IPR013785 Aldolase-type TIM barrel BED34_12390 IPR013798 Indole-3-glycerol phosphate synthase BED34_12390 IPR001468 Indole-3-glycerol phosphate synthase, conserved site BED34_12390 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) BED34_12390 IPR011060 Ribulose-phosphate binding barrel BED34_12395 IPR001926 Pyridoxal-phosphate dependent enzyme BED34_12395 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BED34_12395 IPR023026 Tryptophan synthase beta chain/beta chain-like BED34_12395 IPR006654 Tryptophan synthase, beta chain BED34_12395 IPR006653 Tryptophan synthase, beta chain, conserved site BED34_12400 IPR013785 Aldolase-type TIM barrel BED34_12400 IPR011060 Ribulose-phosphate binding barrel BED34_12400 IPR018204 Tryptophan synthase, alpha chain, active site BED34_12400 IPR002028 Tryptophan synthase, alpha chain BED34_12410 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel BED34_12410 IPR005618 Outer membrane protein, OmpW BED34_12415 IPR005358 Putative zinc- or iron-chelating domain containing protein BED34_12420 IPR009627 Uncharacterised protein family UPF0259 BED34_12430 IPR006008 Intracellular septation protein A BED34_12435 IPR006683 Thioesterase domain BED34_12435 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase BED34_12435 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain BED34_12435 IPR029069 HotDog domain superfamily BED34_12440 IPR037682 TonB, C-terminal BED34_12440 IPR006260 TonB/TolA, C-terminal BED34_12440 IPR003538 Gram-negative bacterial TonB protein BED34_12445 IPR005545 YCII-related BED34_12445 IPR011008 Dimeric alpha-beta barrel BED34_12460 IPR025202 Phospholipase D-like domain BED34_12460 IPR022924 Cardiolipin synthase BED34_12460 IPR027379 Cardiolipin synthase N-terminal BED34_12460 IPR001736 Phospholipase D/Transphosphatidylase BED34_12460 IPR030840 Cardiolipin synthase A BED34_12465 IPR007376 dsDNA mimic, putative BED34_12465 IPR036763 Putative dsDNA mimic superfamily BED34_12470 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_12470 IPR003593 AAA+ ATPase domain BED34_12470 IPR003439 ABC transporter-like BED34_12470 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal BED34_12470 IPR017871 ABC transporter, conserved site BED34_12475 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_12475 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal BED34_12475 IPR003439 ABC transporter-like BED34_12475 IPR003593 AAA+ ATPase domain BED34_12475 IPR017871 ABC transporter, conserved site BED34_12480 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED34_12480 IPR035906 MetI-like superfamily BED34_12480 IPR025966 Oligopeptide transport permease C-like, N-terminal domain BED34_12485 IPR035906 MetI-like superfamily BED34_12485 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED34_12490 IPR030678 Peptide/nickel binding protein, MppA-type BED34_12490 IPR000914 Solute-binding protein family 5 domain BED34_12490 IPR023765 Solute-binding protein family 5, conserved site BED34_12490 IPR039424 Solute-binding protein family 5 BED34_12495 IPR039424 Solute-binding protein family 5 BED34_12495 IPR023765 Solute-binding protein family 5, conserved site BED34_12495 IPR000914 Solute-binding protein family 5 domain BED34_12495 IPR030678 Peptide/nickel binding protein, MppA-type BED34_12500 IPR002771 Multiple antibiotic resistance (MarC)-related BED34_12505 IPR034789 Bifunctional aldehyde-alcohol dehydrogenase, C-terminal domain BED34_12505 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA BED34_12505 IPR018211 Alcohol dehydrogenase, iron-type, conserved site BED34_12505 IPR039697 Iron-type alcohol dehydrogenase-like BED34_12505 IPR016161 Aldehyde/histidinol dehydrogenase BED34_12505 IPR016163 Aldehyde dehydrogenase, C-terminal BED34_12505 IPR016162 Aldehyde dehydrogenase, N-terminal BED34_12505 IPR015590 Aldehyde dehydrogenase domain BED34_12505 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase BED34_12510 IPR020633 Thymidine kinase, conserved site BED34_12510 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_12510 IPR001267 Thymidine kinase BED34_12520 IPR027454 Histone-like protein H-NS, N-terminal BED34_12520 IPR001801 Histone-like protein H-NS BED34_12520 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily BED34_12520 IPR027444 Histone-like protein H-NS, C-terminal domain BED34_12525 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily BED34_12525 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal BED34_12525 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type BED34_12525 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal BED34_12525 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BED34_12525 IPR036291 NAD(P)-binding domain superfamily BED34_12525 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation BED34_12525 IPR017476 UDP-glucose/GDP-mannose dehydrogenase BED34_12530 IPR039420 Transcriptional regulatory protein WalR-like BED34_12530 IPR001789 Signal transduction response regulator, receiver domain BED34_12530 IPR028616 Regulator of RpoS BED34_12530 IPR036457 PPM-type phosphatase domain superfamily BED34_12530 IPR011006 CheY-like superfamily BED34_12535 IPR002641 Patatin-like phospholipase domain BED34_12535 IPR001423 Lysophospholipase patatin, conserved site BED34_12535 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase BED34_12545 IPR032710 NTF2-like domain superfamily BED34_12545 IPR004027 SEC-C motif BED34_12545 IPR023006 Uncharacterised protein family UPF0225 BED34_12550 IPR036477 Formyl transferase, N-terminal domain superfamily BED34_12550 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain BED34_12550 IPR002912 ACT domain BED34_12550 IPR004810 Formyltetrahydrofolate deformylase BED34_12550 IPR002376 Formyl transferase, N-terminal BED34_12565 IPR005119 LysR, substrate-binding BED34_12565 IPR000847 Transcription regulator HTH, LysR BED34_12565 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_12565 IPR036390 Winged helix DNA-binding domain superfamily BED34_12570 IPR020848 AP endonuclease 1, conserved site BED34_12570 IPR020847 AP endonuclease 1, binding site BED34_12570 IPR004808 AP endonuclease 1 BED34_12570 IPR037493 Exodeoxyribonuclease III-like BED34_12570 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BED34_12570 IPR005135 Endonuclease/exonuclease/phosphatase BED34_12575 IPR000086 NUDIX hydrolase domain BED34_12575 IPR020476 NUDIX hydrolase BED34_12575 IPR020084 NUDIX hydrolase, conserved site BED34_12575 IPR015797 NUDIX hydrolase-like domain superfamily BED34_12580 IPR009971 Protein of unknown function DUF1496 BED34_12585 IPR003602 DNA topoisomerase, type IA, DNA-binding domain BED34_12585 IPR034144 DNA topoisomerase 3-like, TOPRIM domain BED34_12585 IPR000380 DNA topoisomerase, type IA BED34_12585 IPR006171 TOPRIM domain BED34_12585 IPR003601 DNA topoisomerase, type IA, domain 2 BED34_12585 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 BED34_12585 IPR023406 DNA topoisomerase, type IA, active site BED34_12585 IPR023405 DNA topoisomerase, type IA, core domain BED34_12585 IPR005738 DNA topoisomerase III BED34_12585 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 BED34_12585 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 BED34_12585 IPR013497 DNA topoisomerase, type IA, central BED34_12590 IPR004536 Selenophosphate synthetase BED34_12590 IPR023061 Selenophosphate synthetase, class I BED34_12590 IPR016188 PurM-like, N-terminal domain BED34_12590 IPR036676 PurM-like, C-terminal domain superfamily BED34_12590 IPR010918 PurM-like, C-terminal domain BED34_12590 IPR036921 PurM-like, N-terminal domain superfamily BED34_12595 IPR000415 Nitroreductase-like BED34_12595 IPR026021 Putative NAD(P)H nitroreductase YdjA-like BED34_12595 IPR029479 Nitroreductase BED34_12605 IPR006034 Asparaginase/glutaminase-like BED34_12605 IPR036152 Asparaginase/glutaminase-like superfamily BED34_12605 IPR037152 L-asparaginase, N-terminal domain superfamily BED34_12605 IPR027473 L-asparaginase, C-terminal BED34_12605 IPR020827 Asparaginase/glutaminase, active site 1 BED34_12605 IPR040919 Asparaginase/glutaminase, C-terminal BED34_12605 IPR027475 Asparaginase/glutaminase, active site 2 BED34_12605 IPR041725 Type I (cytosolic) L-asparaginase BED34_12605 IPR027474 L-asparaginase, N-terminal BED34_12605 IPR006033 Type I L-asparaginase family BED34_12610 IPR036380 Isochorismatase-like superfamily BED34_12610 IPR000868 Isochorismatase-like BED34_12625 IPR028427 Peptide methionine sulfoxide reductase BED34_12625 IPR002579 Peptide methionine sulphoxide reductase MrsB BED34_12625 IPR011057 Mss4-like superfamily BED34_12630 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain BED34_12630 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain BED34_12630 IPR036291 NAD(P)-binding domain superfamily BED34_12630 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I BED34_12630 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site BED34_12630 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family BED34_12635 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase BED34_12635 IPR014718 Glycoside hydrolase-type carbohydrate-binding BED34_12635 IPR025532 Glucose-6-phosphate 1-epimerase BED34_12635 IPR011013 Galactose mutarotase-like domain superfamily BED34_12640 IPR010583 MltA-interacting MipA BED34_12645 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_12645 IPR013153 PrkA AAA domain BED34_12645 IPR010650 PrkA C-terminal domain BED34_12645 IPR016230 Serine-protein kinase, PrkA BED34_12650 IPR006698 Uncharacterised protein family UPF0229 BED34_12665 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_12665 IPR000847 Transcription regulator HTH, LysR BED34_12665 IPR036390 Winged helix DNA-binding domain superfamily BED34_12665 IPR005119 LysR, substrate-binding BED34_12670 IPR012093 Pirin BED34_12670 IPR003829 Pirin, N-terminal domain BED34_12670 IPR011051 RmlC-like cupin domain superfamily BED34_12670 IPR008778 Pirin, C-terminal domain BED34_12670 IPR014710 RmlC-like jelly roll fold BED34_12675 IPR012226 Diguanylate cyclase/phosphodiesterase BED34_12675 IPR001610 PAC motif BED34_12675 IPR035965 PAS domain superfamily BED34_12675 IPR000014 PAS domain BED34_12675 IPR001633 EAL domain BED34_12675 IPR000700 PAS-associated, C-terminal BED34_12675 IPR035919 EAL domain superfamily BED34_12675 IPR029787 Nucleotide cyclase BED34_12675 IPR000160 GGDEF domain BED34_12685 IPR029066 PLP-binding barrel BED34_12685 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal BED34_12685 IPR001608 Alanine racemase, N-terminal BED34_12685 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site BED34_12685 IPR000821 Alanine racemase BED34_12685 IPR011079 Alanine racemase, C-terminal BED34_12690 IPR036188 FAD/NAD(P)-binding domain superfamily BED34_12690 IPR006076 FAD dependent oxidoreductase BED34_12690 IPR023080 D-amino acid dehydrogenase DadA BED34_12695 IPR007390 Sporulation stage V, protein R BED34_12700 IPR028374 FadR, C-terminal domain BED34_12700 IPR036390 Winged helix DNA-binding domain superfamily BED34_12700 IPR014178 Fatty acid response transcription factor FadR BED34_12700 IPR000524 Transcription regulator HTH, GntR BED34_12700 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_12700 IPR008920 Transcription regulator FadR/GntR, C-terminal BED34_12705 IPR004671 Na+/H+ antiporter NhaB BED34_12710 IPR022920 Disulphide bond formation protein DsbB BED34_12710 IPR003752 Disulphide bond formation protein DsbB/BdbC BED34_12710 IPR023380 DsbB-like superfamily BED34_12730 IPR005627 Copper homeostasis protein CutC BED34_12730 IPR036822 Copper homeostasis (CutC) domain superfamily BED34_12730 IPR023648 Copper homeostasis CutC domain BED34_12735 IPR010393 Protein of unknown function DUF991 BED34_12735 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BED34_12740 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED34_12740 IPR008909 DALR anticodon binding BED34_12740 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding BED34_12740 IPR035684 Arginyl-tRNA synthetase, catalytic core domain BED34_12740 IPR005148 Arginyl tRNA synthetase N-terminal domain BED34_12740 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site BED34_12740 IPR001278 Arginine-tRNA ligase BED34_12740 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily BED34_12750 IPR003714 PhoH-like protein BED34_12750 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_12765 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD BED34_12770 IPR001173 Glycosyltransferase 2-like BED34_12770 IPR029044 Nucleotide-diphospho-sugar transferases BED34_12770 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA BED34_12785 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal BED34_12785 IPR036005 Creatinase/aminopeptidase-like BED34_12785 IPR000994 Peptidase M24 BED34_12795 IPR012947 Threonyl/alanyl tRNA synthetase, SAD BED34_12795 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily BED34_12795 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal BED34_12795 IPR003156 DHHA1 domain BED34_12795 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain BED34_12795 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily BED34_12795 IPR002318 Alanine-tRNA ligase, class IIc BED34_12795 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria BED34_12795 IPR009000 Translation protein, beta-barrel domain superfamily BED34_12805 IPR015985 Tellurite resistance methyltransferase TehB-like domain BED34_12805 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED34_12805 IPR014710 RmlC-like jelly roll fold BED34_12805 IPR004537 Tellurite resistance methyltransferase, TehB BED34_12805 IPR014431 Tellurite resistance methyltransferase, TehB type-2 BED34_12805 IPR015392 Domain of unknown function DUF1971 BED34_12815 IPR036249 Thioredoxin-like superfamily BED34_12815 IPR013766 Thioredoxin domain BED34_12815 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant BED34_12815 IPR023555 Thiol-disulphide oxidoreductase ResA BED34_12820 IPR017871 ABC transporter, conserved site BED34_12820 IPR003593 AAA+ ATPase domain BED34_12820 IPR003838 ABC transporter permease protein domain BED34_12820 IPR003439 ABC transporter-like BED34_12820 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_12820 IPR025857 MacB-like periplasmic core domain BED34_12820 IPR017911 ABC transporter, macrolide export, ATP-binding domain BED34_12830 IPR025857 MacB-like periplasmic core domain BED34_12830 IPR017911 ABC transporter, macrolide export, ATP-binding domain BED34_12830 IPR003593 AAA+ ATPase domain BED34_12830 IPR003439 ABC transporter-like BED34_12830 IPR003838 ABC transporter permease protein domain BED34_12830 IPR017871 ABC transporter, conserved site BED34_12830 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_12840 IPR038482 Periplasmic metal-binding protein tp34-type superfamily BED34_12840 IPR018470 Periplasmic metal-binding protein Tp34-type BED34_12845 IPR004923 Iron permease FTR1/Fip1/EfeU BED34_12860 IPR012338 Beta-lactamase/transpeptidase-like BED34_12860 IPR015868 Glutaminase BED34_12865 IPR026040 Hydroxypyruvate isomerase-like BED34_12865 IPR036237 Xylose isomerase-like superfamily BED34_12865 IPR013022 Xylose isomerase-like, TIM barrel domain BED34_12870 IPR036409 Class II aldolase/adducin N-terminal domain superfamily BED34_12870 IPR001303 Class II aldolase/adducin N-terminal BED34_12875 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily BED34_12875 IPR010737 Four-carbon acid sugar kinase, N-terminal domain BED34_12875 IPR042213 Nucleotide-binding, C-terminal domain superfamily BED34_12875 IPR031475 Nucleotide-binding C-terminal domain BED34_12880 IPR036390 Winged helix DNA-binding domain superfamily BED34_12880 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_12880 IPR018356 Transcription regulator, HTH DeoR-type, conserved site BED34_12880 IPR014036 DeoR C-terminal sensor domain BED34_12880 IPR001034 DeoR-type HTH domain BED34_12880 IPR037171 NagB/RpiA transferase-like BED34_12885 IPR033463 Single cache domain 3 BED34_12885 IPR029151 Periplasmic sensor-like domain superfamily BED34_12885 IPR013767 PAS fold BED34_12885 IPR035965 PAS domain superfamily BED34_12885 IPR000014 PAS domain BED34_12885 IPR003594 Histidine kinase/HSP90-like ATPase BED34_12885 IPR005467 Histidine kinase domain BED34_12885 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB BED34_12885 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BED34_12885 IPR039506 SpoOB, alpha-helical domain BED34_12885 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BED34_12890 IPR011006 CheY-like superfamily BED34_12890 IPR024187 Signal transduction response regulator, citrate/malate metabolism BED34_12890 IPR001789 Signal transduction response regulator, receiver domain BED34_12895 IPR004679 2-hydroxycarboxylate transporter BED34_12895 IPR018025 2-hydroxycarboxylate transporter, Proteobacteria/Firmicutes BED34_12900 IPR004841 Amino acid permease/ SLC12A domain BED34_12900 IPR004840 Amino acid permease, conserved site BED34_12915 IPR020846 Major facilitator superfamily domain BED34_12915 IPR036259 MFS transporter superfamily BED34_12915 IPR011701 Major facilitator superfamily BED34_12920 IPR023214 HAD superfamily BED34_12920 IPR006379 HAD-superfamily hydrolase, subfamily IIB BED34_12920 IPR036412 HAD-like superfamily BED34_12920 IPR000150 Cof family BED34_12930 IPR001207 Transposase, mutator type BED34_12935 IPR013217 Methyltransferase type 12 BED34_12935 IPR016584 Methyltransferase VrtF-like BED34_12935 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED34_12945 IPR001207 Transposase, mutator type BED34_12990 IPR011010 DNA breaking-rejoining enzyme, catalytic core BED34_12990 IPR013762 Integrase-like, catalytic domain superfamily BED34_12990 IPR023009 Tyrosine recombinase XerC/XerD BED34_12990 IPR011931 Tyrosine recombinase XerC BED34_12990 IPR004107 Integrase, SAM-like, N-terminal BED34_12990 IPR002104 Integrase, catalytic domain BED34_12990 IPR010998 Integrase/recombinase, N-terminal BED34_12995 IPR019648 Protein of unknown function DUF2511 BED34_13000 IPR008457 Copper resistance protein D BED34_13000 IPR032694 Copper transport protein C/D BED34_13005 IPR014756 Immunoglobulin E-set BED34_13005 IPR007348 CopC domain BED34_13005 IPR032694 Copper transport protein C/D BED34_13010 IPR009078 Ferritin-like superfamily BED34_13010 IPR009040 Ferritin-like diiron domain BED34_13010 IPR001519 Ferritin BED34_13010 IPR008331 Ferritin/DPS protein domain BED34_13010 IPR012347 Ferritin-like BED34_13010 IPR041719 Ferritin, prokaryotic-type BED34_13015 IPR009052 DNA polymerase III-theta, bacterial BED34_13015 IPR036745 DNA polymerase III-theta superfamily BED34_13020 IPR002410 Peptidase S33 BED34_13020 IPR005944 Proline iminopeptidase BED34_13020 IPR000073 Alpha/beta hydrolase fold-1 BED34_13020 IPR029058 Alpha/Beta hydrolase fold BED34_13025 IPR013520 Exonuclease, RNase T/DNA polymerase III BED34_13025 IPR012337 Ribonuclease H-like superfamily BED34_13025 IPR036397 Ribonuclease H superfamily BED34_13030 IPR029058 Alpha/Beta hydrolase fold BED34_13030 IPR002471 Peptidase S9, serine active site BED34_13030 IPR002470 Peptidase S9A, prolyl oligopeptidase BED34_13030 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain BED34_13030 IPR023302 Peptidase S9A, N-terminal domain BED34_13035 IPR038703 YebF/Cmi superfamily BED34_13035 IPR025603 YebF/Colicin-M immunity protein BED34_13035 IPR020236 Uncharacterised protein family YebF BED34_13045 IPR038627 YebG-like superfamily BED34_13045 IPR009813 Uncharacterised protein family YebG BED34_13050 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily BED34_13050 IPR001650 Helicase, C-terminal BED34_13050 IPR014001 Helicase superfamily 1/2, ATP-binding domain BED34_13050 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_13050 IPR028619 ATP-dependent RNA helicase DbpA BED34_13050 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site BED34_13050 IPR011545 DEAD/DEAH box helicase domain BED34_13050 IPR014014 RNA helicase, DEAD-box type, Q motif BED34_13050 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain BED34_13055 IPR011054 Rudiment single hybrid motif BED34_13055 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type BED34_13055 IPR011761 ATP-grasp fold BED34_13055 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase BED34_13055 IPR016185 Pre-ATP-grasp domain superfamily BED34_13055 IPR013815 ATP-grasp fold, subdomain 1 BED34_13060 IPR005371 Uncharacterised protein family UPF0181 BED34_13065 IPR005802 Aminodeoxychorismate synthase, component I BED34_13065 IPR005801 ADC synthase BED34_13065 IPR019999 Anthranilate synthase component I-like BED34_13065 IPR006805 Anthranilate synthase component I, N-terminal BED34_13065 IPR015890 Chorismate-utilising enzyme, C-terminal BED34_13070 IPR023735 Uncharacterised nudix hydrolase NudL BED34_13070 IPR000086 NUDIX hydrolase domain BED34_13070 IPR000059 NUDIX hydrolase, NudL, conserved site BED34_13070 IPR015797 NUDIX hydrolase-like domain superfamily BED34_13075 IPR029009 Allosteric substrate binding domain superfamily BED34_13075 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form BED34_13075 IPR005130 Serine dehydratase-like, alpha subunit BED34_13075 IPR005131 Serine dehydratase beta chain BED34_13080 IPR003346 Transposase, IS116/IS110/IS902 BED34_13080 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED34_13085 IPR005170 Transporter-associated domain BED34_13085 IPR005496 Integral membrane protein TerC BED34_13085 IPR016169 FAD-binding, type PCMH, subdomain 2 BED34_13085 IPR000644 CBS domain BED34_13085 IPR036318 FAD-binding, type PCMH-like superfamily BED34_13090 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup BED34_13090 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily BED34_13090 IPR004720 Phosphotransferase system, sorbose subfamily IIB component BED34_13090 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily BED34_13090 IPR004701 Phosphotransferase system, mannose-type IIA component BED34_13090 IPR013789 Phosphotransferase system, mannose family IIA component BED34_13090 IPR033887 PTS system mannose/sorbose specific IIA subunit BED34_13095 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit BED34_13100 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component BED34_13105 IPR009328 Protein of unknown function DUF986 BED34_13110 IPR003810 Putative manganese efflux pump BED34_13110 IPR022929 Putative manganese efflux pump MntP BED34_13115 IPR010105 TonB-dependent siderophore receptor BED34_13115 IPR037066 TonB-dependent receptor, plug domain superfamily BED34_13115 IPR012910 TonB-dependent receptor, plug domain BED34_13115 IPR030149 TonB-dependent siderophore receptor FcuA/FatA BED34_13115 IPR039423 TonB-dependent receptor-like BED34_13115 IPR010917 TonB-dependent receptor, conserved site BED34_13115 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BED34_13115 IPR010916 TonB box, conserved site BED34_13115 IPR000531 TonB-dependent receptor-like, beta-barrel BED34_13120 IPR000700 PAS-associated, C-terminal BED34_13120 IPR035919 EAL domain superfamily BED34_13120 IPR001633 EAL domain BED34_13120 IPR000160 GGDEF domain BED34_13120 IPR007895 MASE1 BED34_13120 IPR035965 PAS domain superfamily BED34_13120 IPR029787 Nucleotide cyclase BED34_13120 IPR013655 PAS fold-3 BED34_13120 IPR013656 PAS fold-4 BED34_13120 IPR001610 PAC motif BED34_13120 IPR000014 PAS domain BED34_13130 IPR025714 Methyltransferase domain BED34_13130 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted BED34_13130 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED34_13135 IPR001460 Penicillin-binding protein, transpeptidase BED34_13135 IPR012338 Beta-lactamase/transpeptidase-like BED34_13135 IPR005311 Penicillin-binding protein, dimerisation domain BED34_13135 IPR036138 Penicillin-binding protein, dimerisation domain superfamily BED34_13135 IPR037532 Peptidoglycan D,D-transpeptidase FtsI BED34_13145 IPR011129 Cold shock domain BED34_13145 IPR002059 Cold-shock protein, DNA-binding BED34_13145 IPR019844 Cold-shock (CSD) domain BED34_13145 IPR012340 Nucleic acid-binding, OB-fold BED34_13145 IPR012156 Cold shock, CspA BED34_13150 IPR019672 Protein of unknown function DUF2627 BED34_13155 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel BED34_13155 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP BED34_13175 IPR025594 YebO-like protein BED34_13180 IPR025611 YobH-like protein BED34_13185 IPR020262 Uncharacterised protein family YecJ BED34_13190 IPR018060 DNA binding HTH domain, AraC-type BED34_13190 IPR020449 Transcription regulator HTH, AraC- type BED34_13190 IPR018062 HTH domain AraC-type, conserved site BED34_13190 IPR009057 Homeobox-like domain superfamily BED34_13200 IPR002293 Amino acid/polyamine transporter I BED34_13200 IPR004754 Amino acid antiporter BED34_13200 IPR022461 Arginine/ornithine antiporter BED34_13210 IPR039421 Type I protein exporter BED34_13210 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_13210 IPR017871 ABC transporter, conserved site BED34_13210 IPR003439 ABC transporter-like BED34_13210 IPR036640 ABC transporter type 1, transmembrane domain superfamily BED34_13210 IPR011527 ABC transporter type 1, transmembrane domain BED34_13210 IPR003593 AAA+ ATPase domain BED34_13220 IPR003539 Cytolethal distending toxin B BED34_13220 IPR005135 Endonuclease/exonuclease/phosphatase BED34_13220 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BED34_13230 IPR000160 GGDEF domain BED34_13230 IPR001633 EAL domain BED34_13230 IPR003018 GAF domain BED34_13230 IPR029016 GAF-like domain superfamily BED34_13230 IPR013515 Phytochrome, central region BED34_13230 IPR001294 Phytochrome BED34_13230 IPR016132 Phytochrome chromophore attachment domain BED34_13230 IPR035919 EAL domain superfamily BED34_13230 IPR029787 Nucleotide cyclase BED34_13240 IPR028623 HNS-dependent expression B BED34_13240 IPR038303 HNS-dependent expression A/B superfamily BED34_13240 IPR010486 HNS-dependent expression A/B BED34_13245 IPR009739 Lysozyme inhibitor LprI, N-terminal BED34_13255 IPR000620 EamA domain BED34_13270 IPR002577 Helix-turn-helix, HxlR type BED34_13270 IPR036390 Winged helix DNA-binding domain superfamily BED34_13270 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_13275 IPR008030 NmrA-like domain BED34_13275 IPR036291 NAD(P)-binding domain superfamily BED34_13280 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase BED34_13280 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme BED34_13280 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED34_13280 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED34_13280 IPR015424 Pyridoxal phosphate-dependent transferase BED34_13290 IPR015927 Peptidase S24/S26A/S26B/S26C BED34_13290 IPR039418 LexA-like BED34_13290 IPR036286 LexA/Signal peptidase-like superfamily BED34_13290 IPR006197 Peptidase S24, LexA-like BED34_13295 IPR017961 DNA polymerase, Y-family, little finger domain BED34_13295 IPR025188 Domain of unknown function DUF4113 BED34_13295 IPR036775 DNA polymerase, Y-family, little finger domain superfamily BED34_13295 IPR001126 UmuC domain BED34_13300 IPR001610 PAC motif BED34_13300 IPR035965 PAS domain superfamily BED34_13300 IPR013655 PAS fold-3 BED34_13300 IPR004090 Chemotaxis methyl-accepting receptor BED34_13300 IPR003660 HAMP domain BED34_13300 IPR000014 PAS domain BED34_13300 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BED34_13310 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BED34_13310 IPR000843 LacI-type HTH domain BED34_13310 IPR028082 Periplasmic binding protein-like I BED34_13310 IPR001761 Periplasmic binding protein/LacI sugar binding domain BED34_13315 IPR001362 Glycoside hydrolase, family 32 BED34_13315 IPR018053 Glycoside hydrolase, family 32, active site BED34_13315 IPR006232 Sucrose-6-phosphate hydrolase BED34_13315 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily BED34_13315 IPR013148 Glycosyl hydrolase family 32, N-terminal BED34_13315 IPR013189 Glycosyl hydrolase family 32, C-terminal BED34_13315 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily BED34_13320 IPR036259 MFS transporter superfamily BED34_13320 IPR000576 LacY/RafB permease family BED34_13320 IPR020846 Major facilitator superfamily domain BED34_13320 IPR018457 LacY/RafB permease family, conserved site BED34_13335 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site BED34_13335 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic BED34_13335 IPR024084 Isopropylmalate dehydrogenase-like domain BED34_13365 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic BED34_13365 IPR024084 Isopropylmalate dehydrogenase-like domain BED34_13365 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site BED34_13370 IPR006145 Pseudouridine synthase, RsuA/RluA BED34_13370 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F BED34_13370 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site BED34_13370 IPR020103 Pseudouridine synthase, catalytic domain superfamily BED34_13370 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain BED34_13375 IPR033713 Phosphatase NudJ BED34_13375 IPR020084 NUDIX hydrolase, conserved site BED34_13375 IPR020476 NUDIX hydrolase BED34_13375 IPR000086 NUDIX hydrolase domain BED34_13375 IPR015797 NUDIX hydrolase-like domain superfamily BED34_13380 IPR004506 tRNA-specific 2-thiouridylase BED34_13380 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED34_13380 IPR023382 Adenine nucleotide alpha hydrolase-like domains BED34_13385 IPR035932 HflD-like superfamily BED34_13385 IPR007451 High frequency lysogenization protein HflD BED34_13390 IPR013539 Adenylosuccinate lyase PurB, C-terminal BED34_13390 IPR004769 Adenylosuccinate lyase BED34_13390 IPR020557 Fumarate lyase, conserved site BED34_13390 IPR024083 Fumarase/histidase, N-terminal BED34_13390 IPR022761 Fumarate lyase, N-terminal BED34_13390 IPR000362 Fumarate lyase family BED34_13390 IPR008948 L-Aspartase-like BED34_13400 IPR001789 Signal transduction response regulator, receiver domain BED34_13400 IPR039420 Transcriptional regulatory protein WalR-like BED34_13400 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_13400 IPR011006 CheY-like superfamily BED34_13400 IPR001867 OmpR/PhoB-type DNA-binding domain BED34_13405 IPR015014 PhoQ Sensor BED34_13405 IPR005467 Histidine kinase domain BED34_13405 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BED34_13405 IPR003594 Histidine kinase/HSP90-like ATPase BED34_13405 IPR003660 HAMP domain BED34_13405 IPR038429 PhoQ Sensor superfamily BED34_13405 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BED34_13405 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BED34_13415 IPR010161 Peptidase M20B, tripeptide aminopeptidase BED34_13415 IPR002933 Peptidase M20 BED34_13415 IPR036264 Bacterial exopeptidase dimerisation domain BED34_13415 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site BED34_13415 IPR011650 Peptidase M20, dimerisation domain BED34_13420 IPR029035 DHS-like NAD/FAD-binding domain superfamily BED34_13420 IPR003000 Sirtuin family BED34_13420 IPR026591 Sirtuin, catalytic core small domain superfamily BED34_13420 IPR027546 Sirtuin, class III BED34_13420 IPR026590 Sirtuin family, catalytic core domain BED34_13430 IPR011926 Lipoprotein-releasing system transmembrane protein LolE, gammaproteobacteria type BED34_13430 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E BED34_13430 IPR003838 ABC transporter permease protein domain BED34_13430 IPR025857 MacB-like periplasmic core domain BED34_13435 IPR003593 AAA+ ATPase domain BED34_13435 IPR003439 ABC transporter-like BED34_13435 IPR017871 ABC transporter, conserved site BED34_13435 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_13435 IPR015854 ABC transporter, lipoprotein release, LolD BED34_13435 IPR011924 Lipoprotein releasing system, ATP-binding protein BED34_13440 IPR025857 MacB-like periplasmic core domain BED34_13440 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E BED34_13440 IPR003838 ABC transporter permease protein domain BED34_13445 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_13445 IPR037235 TRCF-like, C-terminal domain BED34_13445 IPR005118 Transcription-repair-coupling factor, C-terminal domain BED34_13445 IPR014001 Helicase superfamily 1/2, ATP-binding domain BED34_13445 IPR001650 Helicase, C-terminal BED34_13445 IPR041471 UvrB, interaction domain BED34_13445 IPR003711 CarD-like/TRCF domain BED34_13445 IPR036101 CarD-like/TRCF domain superfamily BED34_13445 IPR011545 DEAD/DEAH box helicase domain BED34_13445 IPR004576 Transcription-repair coupling factor BED34_13450 IPR008816 Glycine zipper 2TM domain BED34_13455 IPR023753 FAD/NAD(P)-binding domain BED34_13455 IPR036188 FAD/NAD(P)-binding domain superfamily BED34_13460 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA BED34_13460 IPR022987 Uncharacterised protein family UPF0227 BED34_13460 IPR029058 Alpha/Beta hydrolase fold BED34_13465 IPR019800 Glycoside hydrolase, family 3, active site BED34_13465 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily BED34_13465 IPR022956 Beta-hexosaminidase, bacterial BED34_13465 IPR017853 Glycoside hydrolase superfamily BED34_13465 IPR001764 Glycoside hydrolase, family 3, N-terminal BED34_13470 IPR002575 Aminoglycoside phosphotransferase BED34_13470 IPR011009 Protein kinase-like domain superfamily BED34_13470 IPR014093 Thiamine kinase BED34_13475 IPR014094 Penicillin-binding protein activator LpoB BED34_13475 IPR012640 Membrane lipoprotein, lipid attachment site BED34_13480 IPR010824 Protein of unknown function DUF1425 BED34_13480 IPR038483 YcfL-like superfamily BED34_13485 IPR001310 Histidine triad (HIT) protein BED34_13485 IPR019808 Histidine triad, conserved site BED34_13485 IPR036265 HIT-like superfamily BED34_13485 IPR011146 HIT-like domain BED34_13490 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal BED34_13490 IPR036291 NAD(P)-binding domain superfamily BED34_13495 IPR036390 Winged helix DNA-binding domain superfamily BED34_13495 IPR000914 Solute-binding protein family 5 domain BED34_13495 IPR023767 Transcriptional regulator SgrR BED34_13495 IPR039424 Solute-binding protein family 5 BED34_13495 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain BED34_13500 IPR007197 Radical SAM BED34_13500 IPR023885 4Fe4S-binding SPASM domain BED34_13500 IPR013785 Aldolase-type TIM barrel BED34_13500 IPR034491 Anaerobic Ser-type sulfatase-maturating enzyme BED34_13510 IPR017871 ABC transporter, conserved site BED34_13510 IPR033838 Colicin V processing peptidase BED34_13510 IPR039421 Type I protein exporter BED34_13510 IPR003593 AAA+ ATPase domain BED34_13510 IPR011527 ABC transporter type 1, transmembrane domain BED34_13510 IPR036640 ABC transporter type 1, transmembrane domain superfamily BED34_13510 IPR003439 ABC transporter-like BED34_13510 IPR005074 Peptidase C39, bacteriocin processing BED34_13510 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_13520 IPR003352 Phosphotransferase system, EIIC BED34_13520 IPR013013 Phosphotransferase system, EIIC component, type 1 BED34_13520 IPR036878 Glucose permease domain IIB BED34_13520 IPR011299 PTS system glucose-specific IIBC component BED34_13520 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component BED34_13520 IPR001996 Phosphotransferase system, IIB component, type 1 BED34_13520 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site BED34_13525 IPR032466 Metal-dependent hydrolase BED34_13525 IPR018228 Deoxyribonuclease, TatD-related, conserved site BED34_13525 IPR001130 TatD family BED34_13525 IPR015991 Uncharacterised hydrolase TatD-type BED34_13530 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal BED34_13530 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_13530 IPR015199 DNA polymerase III, delta subunit, C-terminal BED34_13530 IPR004622 DNA polymerase III, delta prime subunit BED34_13535 IPR018094 Thymidylate kinase BED34_13535 IPR018095 Thymidylate kinase, conserved site BED34_13535 IPR039430 Thymidylate kinase-like domain BED34_13535 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_13540 IPR003770 Endolytic murein transglycosylase BED34_13545 IPR036038 Aminotransferase-like, PLP-dependent enzymes BED34_13545 IPR001544 Aminotransferase class IV BED34_13545 IPR018300 Aminotransferase, class IV, conserved site BED34_13545 IPR017824 Aminodeoxychorismate lyase, class IV BED34_13550 IPR016039 Thiolase-like BED34_13550 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BED34_13550 IPR014030 Beta-ketoacyl synthase, N-terminal BED34_13550 IPR014031 Beta-ketoacyl synthase, C-terminal BED34_13550 IPR018201 Beta-ketoacyl synthase, active site BED34_13550 IPR000794 Beta-ketoacyl synthase BED34_13550 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 BED34_13555 IPR009081 Phosphopantetheine binding ACP domain BED34_13555 IPR036736 ACP-like superfamily BED34_13555 IPR003231 Acyl carrier protein (ACP) BED34_13555 IPR006162 Phosphopantetheine attachment site BED34_13560 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase BED34_13560 IPR020904 Short-chain dehydrogenase/reductase, conserved site BED34_13560 IPR036291 NAD(P)-binding domain superfamily BED34_13560 IPR002347 Short-chain dehydrogenase/reductase SDR BED34_13565 IPR014043 Acyl transferase BED34_13565 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding BED34_13565 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase BED34_13565 IPR024925 Malonyl CoA-acyl carrier protein transacylase BED34_13565 IPR001227 Acyl transferase domain superfamily BED34_13565 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type BED34_13570 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 BED34_13570 IPR016039 Thiolase-like BED34_13570 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal BED34_13570 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BED34_13575 IPR012281 Phospholipid biosynthesis protein, PlsX-like BED34_13575 IPR003664 Fatty acid synthesis PlsX protein BED34_13580 IPR011332 Zinc-binding ribosomal protein BED34_13580 IPR002677 Ribosomal protein L32p BED34_13585 IPR039255 Large ribosomal RNA subunit accumulation protein YceD, bacteria BED34_13585 IPR003772 Large ribosomal RNA subunit accumulation protein YceD BED34_13590 IPR029001 Inosine triphosphate pyrophosphatase-like BED34_13590 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein BED34_13595 IPR036986 RNA-binding S4 domain superfamily BED34_13595 IPR006145 Pseudouridine synthase, RsuA/RluA BED34_13595 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site BED34_13595 IPR006225 Pseudouridine synthase, RluC/RluD BED34_13595 IPR020103 Pseudouridine synthase, catalytic domain superfamily BED34_13595 IPR002942 RNA-binding S4 domain BED34_13600 IPR028878 Ribonuclease E BED34_13600 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G BED34_13600 IPR021968 Polyribonucleotide phosphorylase C-terminal BED34_13600 IPR012340 Nucleic acid-binding, OB-fold BED34_13600 IPR004659 Ribonuclease E/G BED34_13600 IPR003029 S1 domain BED34_13600 IPR022967 RNA-binding domain, S1 BED34_13605 IPR011008 Dimeric alpha-beta barrel BED34_13605 IPR007138 Antibiotic biosynthesis monooxygenase domain BED34_13610 IPR002195 Dihydroorotase, conserved site BED34_13610 IPR004721 Dihydroorotase homodimeric type BED34_13610 IPR006680 Amidohydrolase-related BED34_13610 IPR032466 Metal-dependent hydrolase BED34_13615 IPR036687 DinI-like superfamily BED34_13615 IPR010391 DNA damage-inducible protein DinI-like BED34_13620 IPR025730 Biofilm regulator BssS BED34_13625 IPR023493 N-methyl-L-tryptophan oxidase MTOX BED34_13625 IPR036188 FAD/NAD(P)-binding domain superfamily BED34_13625 IPR006076 FAD dependent oxidoreductase BED34_13630 IPR000792 Transcription regulator LuxR, C-terminal BED34_13630 IPR016032 Signal transduction response regulator, C-terminal effector BED34_13630 IPR001789 Signal transduction response regulator, receiver domain BED34_13635 IPR002549 Transmembrane protein TqsA-like BED34_13650 IPR005614 NrfD family BED34_13655 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BED34_13655 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BED34_13655 IPR006311 Twin-arginine translocation pathway, signal sequence BED34_13665 IPR000792 Transcription regulator LuxR, C-terminal BED34_13665 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_13665 IPR001789 Signal transduction response regulator, receiver domain BED34_13665 IPR011006 CheY-like superfamily BED34_13670 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase BED34_13670 IPR004960 Bacterial lipid A biosynthesis acyltransferase BED34_13675 IPR022385 Rhs repeat-associated core BED34_13675 IPR011324 Cytotoxic necrotizing factor-like, catalytic BED34_13675 IPR037040 Cytotoxic necrotizing factor, Rho-activating domain superfamily BED34_13675 IPR008430 Cytotoxic necrotizing factor, Rho-activating domain BED34_13675 IPR041508 Toxin complex C-like repeat BED34_13680 IPR032808 DoxX family BED34_13690 IPR023692 Multidrug resistance protein MdtG BED34_13690 IPR011701 Major facilitator superfamily BED34_13690 IPR020846 Major facilitator superfamily domain BED34_13690 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG BED34_13690 IPR036259 MFS transporter superfamily BED34_13695 IPR000109 Proton-dependent oligopeptide transporter family BED34_13695 IPR036259 MFS transporter superfamily BED34_13695 IPR005279 Dipeptide/tripeptide permease BED34_13695 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site BED34_13695 IPR020846 Major facilitator superfamily domain BED34_13700 IPR029044 Nucleotide-diphospho-sugar transferases BED34_13700 IPR023725 Glucan biosynthesis glucosyltransferase H BED34_13700 IPR001173 Glycosyltransferase 2-like BED34_13705 IPR014438 Glucan biosynthesis protein MdoG/MdoD BED34_13705 IPR014756 Immunoglobulin E-set BED34_13705 IPR013783 Immunoglobulin-like fold BED34_13705 IPR014718 Glycoside hydrolase-type carbohydrate-binding BED34_13705 IPR011013 Galactose mutarotase-like domain superfamily BED34_13705 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal BED34_13705 IPR023704 Glucan biosynthesis protein G BED34_13710 IPR023723 Glucan biosynthesis protein C BED34_13710 IPR002656 Acyltransferase 3 BED34_13720 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED34_13720 IPR003346 Transposase, IS116/IS110/IS902 BED34_13725 IPR038770 Sodium/solute symporter superfamily BED34_13725 IPR036318 FAD-binding, type PCMH-like superfamily BED34_13725 IPR016169 FAD-binding, type PCMH, subdomain 2 BED34_13725 IPR030151 K(+)/H(+) antiporter NhaP BED34_13725 IPR023729 K(+)/H(+) antiporter NhaP2 BED34_13725 IPR006037 Regulator of K+ conductance, C-terminal BED34_13725 IPR005170 Transporter-associated domain BED34_13725 IPR006153 Cation/H+ exchanger BED34_13725 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily BED34_13735 IPR016181 Acyl-CoA N-acyltransferase BED34_13735 IPR018311 Autoinducer synthesis, conserved site BED34_13735 IPR001690 Autoinducer synthase BED34_13740 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily BED34_13740 IPR016032 Signal transduction response regulator, C-terminal effector BED34_13740 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain BED34_13740 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_13740 IPR000792 Transcription regulator LuxR, C-terminal BED34_13745 IPR019734 Tetratricopeptide repeat BED34_13745 IPR011990 Tetratricopeptide-like helical domain superfamily BED34_13745 IPR013026 Tetratricopeptide repeat-containing domain BED34_13755 IPR013740 Redoxin BED34_13755 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE BED34_13755 IPR036249 Thioredoxin-like superfamily BED34_13755 IPR017937 Thioredoxin, conserved site BED34_13755 IPR013766 Thioredoxin domain BED34_13765 IPR005614 NrfD family BED34_13765 IPR017566 NrfD BED34_13770 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal BED34_13770 IPR017567 Cytochrome c nitrite reductase, Fe-S protein BED34_13770 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BED34_13770 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BED34_13770 IPR006311 Twin-arginine translocation pathway, signal sequence BED34_13775 IPR010177 Doubled CXXCH motif BED34_13775 IPR036280 Multiheme cytochrome superfamily BED34_13775 IPR011031 Multihaem cytochrome BED34_13775 IPR023155 Cytochrome c-552/4 BED34_13775 IPR017564 Cytochrome c nitrite reductase, pentahaem subunit BED34_13780 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit BED34_13780 IPR036280 Multiheme cytochrome superfamily BED34_13780 IPR003321 Cytochrome c552 BED34_13780 IPR011031 Multihaem cytochrome BED34_13790 IPR007453 Sulphur transfer protein DsrC/TusE BED34_13790 IPR025526 DsrC-like domain superfamily BED34_13790 IPR042072 DsrC-like protein, C-terminal domain BED34_13795 IPR017968 Acylphosphatase, conserved site BED34_13795 IPR028627 Acylphosphatase, bacteria BED34_13795 IPR036046 Acylphosphatase-like domain superfamily BED34_13795 IPR001792 Acylphosphatase-like domain BED34_13795 IPR020456 Acylphosphatase BED34_13810 IPR019614 S-adenosylmethionine-dependent methyltransferase BED34_13810 IPR023542 rRNA large subunit methyltransferase I BED34_13810 IPR041532 RlmI, PUA-like domain BED34_13810 IPR002478 PUA domain BED34_13810 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED34_13810 IPR036974 PUA domain superfamily BED34_13810 IPR015947 PUA-like superfamily BED34_13815 IPR022866 Heat shock protein HspQ BED34_13815 IPR011722 Hemimethylated DNA-binding domain BED34_13815 IPR036623 Hemimethylated DNA-binding domain superfamily BED34_13820 IPR036291 NAD(P)-binding domain superfamily BED34_13820 IPR003781 CoA-binding BED34_13825 IPR018635 Uncharacterised protein family UPF0319 BED34_13830 IPR011607 Methylglyoxal synthase-like domain BED34_13830 IPR036914 Methylglyoxal synthase-like domain superfamily BED34_13830 IPR018148 Methylglyoxal synthase, active site BED34_13830 IPR004363 Methylglyoxal synthase BED34_13835 IPR014016 UvrD-like helicase, ATP-binding domain BED34_13835 IPR014017 UvrD-like DNA helicase, C-terminal BED34_13835 IPR000212 DNA helicase, UvrD/REP type BED34_13835 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_13835 IPR022161 DNA helicase IV, N-terminal domain BED34_13835 IPR034739 UvrD/AddA helicase, N-terminal BED34_13840 IPR005185 Inner membrane component domain BED34_13840 IPR031308 Uncharacterised conserved protein UCP028777 BED34_13845 IPR010020 Integral membrane protein, YccS/YhfK BED34_13845 IPR010019 Integral membrane protein, YccS BED34_13845 IPR032692 Integral membrane protein YccS, N-terminal BED34_13850 IPR007077 TfoX, C-terminal BED34_13850 IPR026256 Transcriptional regulator, TfoX/Sxy-type BED34_13850 IPR007076 TfoX, N-terminal BED34_13860 IPR000498 Outer membrane protein OmpA-like, transmembrane domain BED34_13860 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel BED34_13860 IPR006664 Outer membrane protein, bacterial BED34_13860 IPR002368 Outer membrane protein, OmpA BED34_13860 IPR006665 OmpA-like domain BED34_13860 IPR006690 Outer membrane protein, OmpA-like, conserved site BED34_13860 IPR036737 OmpA-like domain superfamily BED34_13865 IPR035087 MatP, N-terminal BED34_13865 IPR038339 MatP, N-terminal domain superfamily BED34_13865 IPR035375 MatP, C-terminal ribbon-helix-helix domain BED34_13865 IPR013321 Arc-type ribbon-helix-helix BED34_13865 IPR009390 Macrodomain Ter protein, MatP BED34_13870 IPR027065 Lon protease BED34_13870 IPR020568 Ribosomal protein S5 domain 2-type fold BED34_13870 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BED34_13870 IPR008269 Peptidase S16, Lon proteolytic domain BED34_13870 IPR041699 Lon protease, AAA domain BED34_13875 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ BED34_13875 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA BED34_13875 IPR029069 HotDog domain superfamily BED34_13885 IPR014030 Beta-ketoacyl synthase, N-terminal BED34_13885 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BED34_13885 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 BED34_13885 IPR000794 Beta-ketoacyl synthase BED34_13885 IPR016039 Thiolase-like BED34_13885 IPR018201 Beta-ketoacyl synthase, active site BED34_13885 IPR014031 Beta-ketoacyl synthase, C-terminal BED34_13890 IPR005586 ABC-type transport auxiliary lipoprotein component BED34_13895 IPR003399 Mce/MlaD BED34_13900 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type BED34_13900 IPR007498 Intermembrane transport protein PqiA-like BED34_13905 IPR003439 ABC transporter-like BED34_13905 IPR032524 ABC transporter Uup, C-terminal BED34_13905 IPR003593 AAA+ ATPase domain BED34_13905 IPR017871 ABC transporter, conserved site BED34_13905 IPR032781 ABC-transporter extension domain BED34_13905 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily BED34_13905 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_13910 IPR004114 THUMP domain BED34_13910 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED34_13910 IPR019614 S-adenosylmethionine-dependent methyltransferase BED34_13910 IPR000241 Putative RNA methylase domain BED34_13910 IPR002052 DNA methylase, N-6 adenine-specific, conserved site BED34_13910 IPR017244 Ribosomal RNA large subunit methyltransferase K/L BED34_13915 IPR036010 2Fe-2S ferredoxin-like superfamily BED34_13915 IPR005303 MOSC, N-terminal beta barrel BED34_13915 IPR005302 Molybdenum cofactor sulfurase, C-terminal BED34_13915 IPR012675 Beta-grasp domain superfamily BED34_13915 IPR011037 Pyruvate kinase-like, insert domain superfamily BED34_13915 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site BED34_13915 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain BED34_13920 IPR009809 Cell division protein ZapC BED34_13925 IPR005720 Dihydroorotate dehydrogenase domain BED34_13925 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 BED34_13925 IPR001295 Dihydroorotate dehydrogenase, conserved site BED34_13925 IPR013785 Aldolase-type TIM barrel BED34_13925 IPR005719 Dihydroorotate dehydrogenase, class 2 BED34_13930 IPR042097 Aminopeptidase N-like , N-terminal BED34_13930 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase BED34_13930 IPR014782 Peptidase M1, membrane alanine aminopeptidase BED34_13930 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily BED34_13930 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily BED34_13930 IPR012779 Peptidase M1, alanyl aminopeptidase BED34_13930 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold BED34_13930 IPR027268 Peptidase M4/M1, CTD superfamily BED34_13930 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal BED34_13935 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal BED34_13935 IPR007229 Nicotinate phosphoribosyltransferase family BED34_13935 IPR006406 Nicotinate phosphoribosyltransferase BED34_13935 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase BED34_13935 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain BED34_13940 IPR006195 Aminoacyl-tRNA synthetase, class II BED34_13940 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type BED34_13940 IPR012340 Nucleic acid-binding, OB-fold BED34_13940 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb BED34_13940 IPR004522 Asparagine-tRNA ligase BED34_13940 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) BED34_13945 IPR023614 Porin domain superfamily BED34_13945 IPR033900 Porin domain, Gram-negative type BED34_13945 IPR001702 Porin, Gram-negative type BED34_13945 IPR013793 Porin, Gram-negative type, conserved site BED34_13945 IPR001897 Porin, gammaproteobacterial BED34_13950 IPR000796 Aspartate/other aminotransferase BED34_13950 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site BED34_13950 IPR015424 Pyridoxal phosphate-dependent transferase BED34_13950 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED34_13950 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED34_13950 IPR004839 Aminotransferase, class I/classII BED34_13960 IPR001279 Metallo-beta-lactamase BED34_13960 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BED34_13965 IPR010275 Protein of unknown function DUF882 BED34_13965 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily BED34_13965 IPR006311 Twin-arginine translocation pathway, signal sequence BED34_13970 IPR038063 L,D-transpeptidase catalytic domain-like BED34_13970 IPR036365 PGBD-like superfamily BED34_13970 IPR002477 Peptidoglycan binding-like BED34_13970 IPR005490 L,D-transpeptidase catalytic domain BED34_13975 IPR012090 Chromosome partition protein MukB BED34_13975 IPR032520 MukB, hinge domain BED34_13975 IPR007406 MukB, N-terminal domain BED34_13975 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_13980 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE BED34_13980 IPR042037 MukE, C-terminal domain BED34_13980 IPR042038 MukE, N-terminal domain BED34_13985 IPR038198 MukF, C-terminal domain superfamily BED34_13985 IPR036141 MukF, middle domain superfamily BED34_13985 IPR033439 Chromosome partition protein MukF, winged-helix domain BED34_13985 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_13985 IPR033441 Chromosome partition protein MukF, C-terminal domain BED34_13985 IPR036390 Winged helix DNA-binding domain superfamily BED34_13985 IPR033440 Chromosome partition protein MukF, middle domain BED34_13985 IPR005582 Chromosome partition protein MukF BED34_13990 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase BED34_13990 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED34_13995 IPR003848 Domain of unknown function DUF218 BED34_14000 IPR011009 Protein kinase-like domain superfamily BED34_14000 IPR002575 Aminoglycoside phosphotransferase BED34_14005 IPR029044 Nucleotide-diphospho-sugar transferases BED34_14005 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase BED34_14005 IPR003329 Acylneuraminate cytidylyltransferase BED34_14010 IPR005651 Trm112-like BED34_14015 IPR011129 Cold shock domain BED34_14015 IPR012156 Cold shock, CspA BED34_14015 IPR019844 Cold-shock (CSD) domain BED34_14015 IPR002059 Cold-shock protein, DNA-binding BED34_14015 IPR012340 Nucleic acid-binding, OB-fold BED34_14020 IPR011129 Cold shock domain BED34_14020 IPR019844 Cold-shock (CSD) domain BED34_14020 IPR012156 Cold shock, CspA BED34_14020 IPR012340 Nucleic acid-binding, OB-fold BED34_14020 IPR002059 Cold-shock protein, DNA-binding BED34_14025 IPR009770 Domain of unknown function DUF1338 BED34_14030 IPR003758 Tetraacyldisaccharide 4'-kinase BED34_14030 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_14035 IPR011527 ABC transporter type 1, transmembrane domain BED34_14035 IPR017871 ABC transporter, conserved site BED34_14035 IPR011917 ABC transporter, lipid A export, MsbA BED34_14035 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_14035 IPR039421 Type I protein exporter BED34_14035 IPR003439 ABC transporter-like BED34_14035 IPR036640 ABC transporter type 1, transmembrane domain superfamily BED34_14035 IPR003593 AAA+ ATPase domain BED34_14040 IPR035681 ComA-like, MBL domain BED34_14040 IPR001279 Metallo-beta-lactamase BED34_14040 IPR004797 Competence protein ComEC/Rec2 BED34_14040 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BED34_14040 IPR004477 ComEC/Rec2-related protein BED34_14045 IPR005685 Integration host factor, beta subunit BED34_14045 IPR000119 Histone-like DNA-binding protein BED34_14045 IPR020816 Histone-like DNA-binding protein, conserved site BED34_14045 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily BED34_14050 IPR022967 RNA-binding domain, S1 BED34_14050 IPR003029 S1 domain BED34_14050 IPR012340 Nucleic acid-binding, OB-fold BED34_14050 IPR000110 Ribosomal protein S1 BED34_14055 IPR011994 Cytidylate kinase domain BED34_14055 IPR003136 Cytidylate kinase BED34_14055 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_14060 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site BED34_14060 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta BED34_14060 IPR001986 Enolpyruvate transferase domain BED34_14060 IPR036968 Enolpyruvate transferase domain superfamily BED34_14060 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase BED34_14065 IPR000192 Aminotransferase class V domain BED34_14065 IPR022278 Phosphoserine aminotransferase BED34_14065 IPR015424 Pyridoxal phosphate-dependent transferase BED34_14065 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED34_14065 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED34_14065 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site BED34_14070 IPR007353 Protein of unknown function DUF421 BED34_14070 IPR023090 UPF0702, alpha/beta domain superfamily BED34_14075 IPR027475 Asparaginase/glutaminase, active site 2 BED34_14075 IPR036152 Asparaginase/glutaminase-like superfamily BED34_14075 IPR006034 Asparaginase/glutaminase-like BED34_14075 IPR037152 L-asparaginase, N-terminal domain superfamily BED34_14075 IPR027474 L-asparaginase, N-terminal BED34_14075 IPR027473 L-asparaginase, C-terminal BED34_14075 IPR040919 Asparaginase/glutaminase, C-terminal BED34_14075 IPR004550 L-asparaginase, type II BED34_14075 IPR020827 Asparaginase/glutaminase, active site 1 BED34_14080 IPR041080 YcaO cyclodehydratase, C-terminal BED34_14080 IPR003776 YcaO-like domain BED34_14085 IPR023271 Aquaporin-like BED34_14085 IPR000292 Formate/nitrite transporter BED34_14085 IPR024002 Formate/nitrite transporter, conserved site BED34_14085 IPR023999 Formate transporter FocA, putative BED34_14090 IPR004184 Pyruvate formate lyase domain BED34_14090 IPR001150 Glycine radical domain BED34_14090 IPR019777 Formate C-acetyltransferase glycine radical, conserved site BED34_14090 IPR005949 Formate acetyltransferase BED34_14095 IPR034465 Pyruvate formate-lyase activase BED34_14095 IPR001989 Radical-activating enzyme, conserved site BED34_14095 IPR013785 Aldolase-type TIM barrel BED34_14095 IPR034457 Organic radical-activating enzymes BED34_14095 IPR012839 Organic radical enzyme activase BED34_14095 IPR012838 Pyruvate formate-lyase 1 activating enzyme BED34_14095 IPR007197 Radical SAM BED34_14100 IPR011701 Major facilitator superfamily BED34_14100 IPR020846 Major facilitator superfamily domain BED34_14100 IPR036259 MFS transporter superfamily BED34_14100 IPR023745 MSF-type transporter, YcaD BED34_14105 IPR001207 Transposase, mutator type BED34_14115 IPR003346 Transposase, IS116/IS110/IS902 BED34_14115 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED34_14120 IPR033729 Serine-tRNA ligase catalytic core domain BED34_14120 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm BED34_14120 IPR006195 Aminoacyl-tRNA synthetase, class II BED34_14120 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) BED34_14120 IPR015866 Serine-tRNA synthetase, type1, N-terminal BED34_14120 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily BED34_14120 IPR002317 Serine-tRNA ligase, type1 BED34_14125 IPR021886 MgsA AAA+ ATPase C-terminal BED34_14125 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal BED34_14125 IPR003593 AAA+ ATPase domain BED34_14125 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_14125 IPR032423 AAA C-terminal domain BED34_14125 IPR003959 ATPase, AAA-type, core BED34_14130 IPR029046 Lipoprotein localisation LolA/LolB/LppX BED34_14130 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria BED34_14130 IPR004564 Outer membrane lipoprotein carrier protein LolA-like BED34_14135 IPR018541 FtsK gamma domain BED34_14135 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_14135 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_14135 IPR025199 DNA translocase FtsK, 4TM region BED34_14135 IPR036390 Winged helix DNA-binding domain superfamily BED34_14135 IPR041027 FtsK alpha domain BED34_14135 IPR002543 FtsK domain BED34_14140 IPR019885 Transcription regulator HTH, AsnC-type, conserved site BED34_14140 IPR036390 Winged helix DNA-binding domain superfamily BED34_14140 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain BED34_14140 IPR019888 Transcription regulator AsnC-type BED34_14140 IPR011991 ArsR-like helix-turn-helix domain BED34_14140 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_14140 IPR011008 Dimeric alpha-beta barrel BED34_14140 IPR000485 AsnC-type HTH domain BED34_14145 IPR036188 FAD/NAD(P)-binding domain superfamily BED34_14145 IPR005982 Thioredoxin reductase BED34_14145 IPR023753 FAD/NAD(P)-binding domain BED34_14145 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site BED34_14150 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_14150 IPR003439 ABC transporter-like BED34_14150 IPR036640 ABC transporter type 1, transmembrane domain superfamily BED34_14150 IPR039421 Type I protein exporter BED34_14150 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD BED34_14150 IPR017871 ABC transporter, conserved site BED34_14150 IPR003593 AAA+ ATPase domain BED34_14150 IPR011527 ABC transporter type 1, transmembrane domain BED34_14155 IPR003593 AAA+ ATPase domain BED34_14155 IPR011527 ABC transporter type 1, transmembrane domain BED34_14155 IPR036640 ABC transporter type 1, transmembrane domain superfamily BED34_14155 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC BED34_14155 IPR003439 ABC transporter-like BED34_14155 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_14155 IPR017871 ABC transporter, conserved site BED34_14160 IPR016181 Acyl-CoA N-acyltransferase BED34_14160 IPR042203 Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal BED34_14160 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase BED34_14165 IPR006196 RNA-binding domain, S1, IF1 type BED34_14165 IPR004368 Translation initiation factor IF-1 BED34_14165 IPR012340 Nucleic acid-binding, OB-fold BED34_14165 IPR022967 RNA-binding domain, S1 BED34_14170 IPR004176 Clp, N-terminal BED34_14170 IPR003959 ATPase, AAA-type, core BED34_14170 IPR019489 Clp ATPase, C-terminal BED34_14170 IPR041546 ClpA/ClpB, AAA lid domain BED34_14170 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA BED34_14170 IPR028299 ClpA/B, conserved site 2 BED34_14170 IPR018368 ClpA/B, conserved site 1 BED34_14170 IPR036628 Clp, N-terminal domain superfamily BED34_14170 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_14170 IPR001270 ClpA/B family BED34_14170 IPR003593 AAA+ ATPase domain BED34_14175 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like BED34_14175 IPR003769 Adaptor protein ClpS, core BED34_14175 IPR022935 ATP-dependent Clp protease adaptor protein ClpS BED34_14180 IPR002059 Cold-shock protein, DNA-binding BED34_14180 IPR012751 CspD, cold shock BED34_14180 IPR012340 Nucleic acid-binding, OB-fold BED34_14180 IPR019844 Cold-shock (CSD) domain BED34_14180 IPR012156 Cold shock, CspA BED34_14180 IPR011129 Cold shock domain BED34_14185 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_14185 IPR025857 MacB-like periplasmic core domain BED34_14185 IPR003593 AAA+ ATPase domain BED34_14185 IPR017911 ABC transporter, macrolide export, ATP-binding domain BED34_14185 IPR017871 ABC transporter, conserved site BED34_14185 IPR003439 ABC transporter-like BED34_14185 IPR003838 ABC transporter permease protein domain BED34_14190 IPR006143 RND efflux pump, membrane fusion protein BED34_14190 IPR030190 Macrolide export protein MacA BED34_14190 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BED34_14195 IPR007488 Protein of unknown function DUF535 BED34_14200 IPR034139 OLD protein-like, TOPRIM domain BED34_14200 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_14200 IPR022602 Protein of unknown function DUF2813 BED34_14200 IPR006171 TOPRIM domain BED34_14205 IPR005642 Lysine exporter LysO BED34_14210 IPR010048 Hydroxylamine reductase BED34_14210 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase BED34_14210 IPR016100 Prismane, alpha-bundle BED34_14210 IPR016099 Prismane-like, alpha/beta-sandwich BED34_14210 IPR011254 Prismane-like superfamily BED34_14215 IPR000951 Phthalate dioxygenase reductase BED34_14215 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BED34_14215 IPR017938 Riboflavin synthase-like beta-barrel BED34_14215 IPR001433 Oxidoreductase FAD/NAD(P)-binding BED34_14215 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain BED34_14215 IPR012675 Beta-grasp domain superfamily BED34_14215 IPR017927 FAD-binding domain, ferredoxin reductase-type BED34_14215 IPR036010 2Fe-2S ferredoxin-like superfamily BED34_14215 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain BED34_14220 IPR012000 Thiamine pyrophosphate enzyme, central domain BED34_14220 IPR029061 Thiamin diphosphate-binding fold BED34_14220 IPR029035 DHS-like NAD/FAD-binding domain superfamily BED34_14220 IPR000399 TPP-binding enzyme, conserved site BED34_14220 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding BED34_14220 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain BED34_14225 IPR011610 S-adenosyl-L-methionine-dependent methyltransferase, putative BED34_14225 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp BED34_14225 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED34_14230 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase BED34_14230 IPR023603 Threonine aldolase BED34_14230 IPR015424 Pyridoxal phosphate-dependent transferase BED34_14230 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED34_14230 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED34_14235 IPR016040 NAD(P)-binding domain BED34_14235 IPR021295 Protein of unknown function DUF2867 BED34_14235 IPR036291 NAD(P)-binding domain superfamily BED34_14240 IPR001509 NAD-dependent epimerase/dehydratase BED34_14240 IPR036291 NAD(P)-binding domain superfamily BED34_14245 IPR024289 Domain of unknown function DUF3828 BED34_14250 IPR017871 ABC transporter, conserved site BED34_14250 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_14250 IPR003439 ABC transporter-like BED34_14250 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type BED34_14250 IPR003593 AAA+ ATPase domain BED34_14255 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BED34_14255 IPR001320 Ionotropic glutamate receptor BED34_14255 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter BED34_14255 IPR018313 Solute-binding protein family 3, conserved site BED34_14260 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED34_14260 IPR035906 MetI-like superfamily BED34_14260 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain BED34_14265 IPR035906 MetI-like superfamily BED34_14265 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain BED34_14265 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED34_14270 IPR018313 Solute-binding protein family 3, conserved site BED34_14270 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter BED34_14270 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BED34_14270 IPR001320 Ionotropic glutamate receptor BED34_14275 IPR030390 RNA methyltransferase TrmA, active site BED34_14275 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC BED34_14275 IPR010280 (Uracil-5)-methyltransferase family BED34_14275 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED34_14275 IPR030391 RNA methyltransferase TrmA, conserved site BED34_14280 IPR019703 Protein of unknown function DUF2593 BED34_14285 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED34_14285 IPR035906 MetI-like superfamily BED34_14290 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED34_14290 IPR035906 MetI-like superfamily BED34_14295 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit BED34_14295 IPR013611 Transport-associated OB, type 2 BED34_14295 IPR008995 Molybdate/tungstate binding, C-terminal BED34_14295 IPR017871 ABC transporter, conserved site BED34_14295 IPR003593 AAA+ ATPase domain BED34_14295 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_14295 IPR003439 ABC transporter-like BED34_14300 IPR006059 Bacterial extracellular solute-binding protein BED34_14300 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein BED34_14305 IPR019660 Putative sensory transduction regulator YbjN BED34_14310 IPR010815 Protein of unknown function DUF1418 BED34_14315 IPR011902 Glutaredoxin, GrxA BED34_14315 IPR014025 Glutaredoxin subgroup BED34_14315 IPR011767 Glutaredoxin active site BED34_14315 IPR036249 Thioredoxin-like superfamily BED34_14315 IPR002109 Glutaredoxin BED34_14320 IPR006512 YidE/YbjL duplication BED34_14320 IPR023017 Transport protein YbjL, putative BED34_14320 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily BED34_14320 IPR006037 Regulator of K+ conductance, C-terminal BED34_14330 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily BED34_14330 IPR033879 Undecaprenyl-diphosphatase BED34_14330 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BED34_14335 IPR028581 Deoxyribose-phosphate aldolase type I BED34_14335 IPR013785 Aldolase-type TIM barrel BED34_14335 IPR002915 DeoC/FbaB/ lacD aldolase BED34_14335 IPR011343 Deoxyribose-phosphate aldolase BED34_14340 IPR018356 Transcription regulator, HTH DeoR-type, conserved site BED34_14340 IPR014036 DeoR C-terminal sensor domain BED34_14340 IPR001034 DeoR-type HTH domain BED34_14340 IPR037171 NagB/RpiA transferase-like BED34_14345 IPR004694 Hydroxy amino acid transporter BED34_14350 IPR005130 Serine dehydratase-like, alpha subunit BED34_14350 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form BED34_14350 IPR029009 Allosteric substrate binding domain superfamily BED34_14350 IPR005131 Serine dehydratase beta chain BED34_14355 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED34_14355 IPR003346 Transposase, IS116/IS110/IS902 BED34_14360 IPR012338 Beta-lactamase/transpeptidase-like BED34_14360 IPR015956 Penicillin-binding protein, C-terminal domain superfamily BED34_14360 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A BED34_14360 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal BED34_14360 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily BED34_14360 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal BED34_14365 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BED34_14365 IPR005857 Cystathionine beta-synthase BED34_14365 IPR001926 Pyridoxal-phosphate dependent enzyme BED34_14365 IPR000644 CBS domain BED34_14370 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED34_14370 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme BED34_14370 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED34_14370 IPR015424 Pyridoxal phosphate-dependent transferase BED34_14375 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED34_14375 IPR035906 MetI-like superfamily BED34_14380 IPR018449 NIL domain BED34_14380 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_14380 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal BED34_14380 IPR017871 ABC transporter, conserved site BED34_14380 IPR003439 ABC transporter-like BED34_14380 IPR026253 Methionine import ATP-binding protein MetN BED34_14380 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain BED34_14380 IPR003593 AAA+ ATPase domain BED34_14385 IPR004872 Lipoprotein NlpA family BED34_14395 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like BED34_14395 IPR036412 HAD-like superfamily BED34_14395 IPR023214 HAD superfamily BED34_14400 IPR010987 Glutathione S-transferase, C-terminal-like BED34_14400 IPR036282 Glutathione S-transferase, C-terminal domain superfamily BED34_14400 IPR004045 Glutathione S-transferase, N-terminal BED34_14400 IPR004046 Glutathione S-transferase, C-terminal BED34_14400 IPR036249 Thioredoxin-like superfamily BED34_14405 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BED34_14405 IPR010916 TonB box, conserved site BED34_14405 IPR000531 TonB-dependent receptor-like, beta-barrel BED34_14405 IPR037066 TonB-dependent receptor, plug domain superfamily BED34_14405 IPR012910 TonB-dependent receptor, plug domain BED34_14405 IPR039426 Vitamin B12 transporter BtuB-like BED34_14405 IPR010917 TonB-dependent receptor, conserved site BED34_14410 IPR003439 ABC transporter-like BED34_14410 IPR015863 ABC transporter, hemin import, HmuV BED34_14410 IPR003593 AAA+ ATPase domain BED34_14410 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_14415 IPR000522 ABC transporter, permease protein, BtuC-like BED34_14415 IPR037294 ABC transporter, BtuC-like BED34_14420 IPR004840 Amino acid permease, conserved site BED34_14420 IPR004841 Amino acid permease/ SLC12A domain BED34_14425 IPR000847 Transcription regulator HTH, LysR BED34_14425 IPR005119 LysR, substrate-binding BED34_14425 IPR036390 Winged helix DNA-binding domain superfamily BED34_14425 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_14440 IPR004630 Uncharacterised protein family UPF0324, bacteria BED34_14440 IPR018383 Uncharacterised protein family UPF0324, prokaryote BED34_14445 IPR001719 AP endonuclease 2 BED34_14445 IPR018246 AP endonuclease 2, zinc binding site BED34_14445 IPR036237 Xylose isomerase-like superfamily BED34_14445 IPR013022 Xylose isomerase-like, TIM barrel domain BED34_14450 IPR037224 PapC, N-terminal domain superfamily BED34_14450 IPR025949 PapC-like, C-terminal domain BED34_14450 IPR042186 Outer membrane usher protein FimD, plug domain BED34_14450 IPR025885 PapC, N-terminal domain BED34_14450 IPR018030 Fimbrial membrane usher, conserved site BED34_14450 IPR000015 Outer membrane usher protein BED34_14455 IPR013783 Immunoglobulin-like fold BED34_14455 IPR001829 Pili assembly chaperone, bacterial BED34_14455 IPR016148 Pili assembly chaperone, C-terminal BED34_14455 IPR018046 Pili assembly chaperone, conserved site BED34_14455 IPR016147 Pili assembly chaperone, N-terminal BED34_14455 IPR008962 PapD-like superfamily BED34_14455 IPR036316 Pili assembly chaperone, C-terminal domain superfamily BED34_14465 IPR035182 Protein of unknown function PsaF BED34_14470 IPR016032 Signal transduction response regulator, C-terminal effector BED34_14470 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_14470 IPR001867 OmpR/PhoB-type DNA-binding domain BED34_14475 IPR003501 Phosphotransferase system, EIIB component, type 2/3 BED34_14475 IPR013011 Phosphotransferase system, EIIB component, type 2 BED34_14475 IPR036095 PTS system IIB component-like superfamily BED34_14475 IPR006327 Phosphotransferase system, fructose IIC component BED34_14475 IPR013014 Phosphotransferase system, EIIC component, type 2 BED34_14475 IPR003353 Phosphotransferase system, fructose-specific IIB subunit BED34_14475 IPR003352 Phosphotransferase system, EIIC BED34_14480 IPR022463 Fructose 1-phosphate kinase BED34_14480 IPR011611 Carbohydrate kinase PfkB BED34_14480 IPR029056 Ribokinase-like BED34_14480 IPR017583 Tagatose/fructose phosphokinase BED34_14480 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site BED34_14485 IPR000032 Phosphocarrier protein HPr-like BED34_14485 IPR035895 HPr-like superfamily BED34_14485 IPR016152 Phosphotransferase/anion transporter BED34_14485 IPR002178 PTS EIIA type-2 domain BED34_14485 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site BED34_14485 IPR002114 Phosphotransferase system, HPr serine phosphorylation site BED34_14490 IPR020084 NUDIX hydrolase, conserved site BED34_14490 IPR006357 HAD-superfamily hydrolase, subfamily IIA BED34_14490 IPR000086 NUDIX hydrolase domain BED34_14490 IPR015797 NUDIX hydrolase-like domain superfamily BED34_14490 IPR020476 NUDIX hydrolase BED34_14490 IPR023214 HAD superfamily BED34_14490 IPR036412 HAD-like superfamily BED34_14495 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK BED34_14495 IPR011031 Multihaem cytochrome BED34_14495 IPR038266 NapC/NirT cytochrome c superfamily BED34_14495 IPR005126 NapC/NirT cytochrome c, N-terminal BED34_14495 IPR036280 Multiheme cytochrome superfamily BED34_14500 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase BED34_14500 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site BED34_14500 IPR006311 Twin-arginine translocation pathway, signal sequence BED34_14500 IPR006657 Molybdopterin dinucleotide-binding domain BED34_14500 IPR041460 Molybdopterin oxidoreductase, N-terminal BED34_14500 IPR006656 Molybdopterin oxidoreductase BED34_14500 IPR009010 Aspartate decarboxylase-like domain superfamily BED34_14500 IPR041954 Trimethylamine-N-oxide reductase-like, molybdopterin-binding domain BED34_14505 IPR005358 Putative zinc- or iron-chelating domain containing protein BED34_14510 IPR013059 Tryptophan/tyrosine transporter BED34_14510 IPR018227 Amino acid/polyamine transporter 2 BED34_14515 IPR008991 Translation protein SH3-like domain superfamily BED34_14515 IPR013185 Translation elongation factor, KOW-like BED34_14515 IPR011897 Translation elongation factor P-like, YeiP BED34_14515 IPR001059 Translation elongation factor P/YeiP, central BED34_14515 IPR013852 Translation elongation factor P/YeiP, conserved site BED34_14515 IPR012340 Nucleic acid-binding, OB-fold BED34_14515 IPR015365 Elongation factor P, C-terminal BED34_14515 IPR020599 Translation elongation factor P/YeiP BED34_14515 IPR014722 Ribosomal protein L2, domain 2 BED34_14520 IPR004628 Mannonate dehydratase BED34_14520 IPR036237 Xylose isomerase-like superfamily BED34_14530 IPR023027 Mannitol dehydrogenase, conserved site BED34_14530 IPR013131 Mannitol dehydrogenase, N-terminal BED34_14530 IPR036291 NAD(P)-binding domain superfamily BED34_14530 IPR000669 Mannitol dehydrogenase BED34_14530 IPR013328 6-phosphogluconate dehydrogenase, domain 2 BED34_14530 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BED34_14530 IPR013118 Mannitol dehydrogenase, C-terminal BED34_14535 IPR011711 GntR, C-terminal BED34_14535 IPR008920 Transcription regulator FadR/GntR, C-terminal BED34_14535 IPR000524 Transcription regulator HTH, GntR BED34_14535 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_14535 IPR036390 Winged helix DNA-binding domain superfamily BED34_14545 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal BED34_14545 IPR003495 CobW/HypB/UreG, nucleotide-binding domain BED34_14545 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_14550 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BED34_14550 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily BED34_14550 IPR032908 Lipid A 1-diphosphate synthase BED34_14555 IPR000064 Endopeptidase, NLPC/P60 domain BED34_14555 IPR038765 Papain-like cysteine peptidase superfamily BED34_14565 IPR035919 EAL domain superfamily BED34_14565 IPR001633 EAL domain BED34_14565 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain BED34_14570 IPR030678 Peptide/nickel binding protein, MppA-type BED34_14570 IPR039424 Solute-binding protein family 5 BED34_14570 IPR000914 Solute-binding protein family 5 domain BED34_14575 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED34_14575 IPR035906 MetI-like superfamily BED34_14580 IPR025966 Oligopeptide transport permease C-like, N-terminal domain BED34_14580 IPR035906 MetI-like superfamily BED34_14580 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED34_14585 IPR003593 AAA+ ATPase domain BED34_14585 IPR003439 ABC transporter-like BED34_14585 IPR017871 ABC transporter, conserved site BED34_14585 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal BED34_14585 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_14590 IPR020489 Uncharacterised protein family YejG BED34_14595 IPR020846 Major facilitator superfamily domain BED34_14595 IPR036259 MFS transporter superfamily BED34_14595 IPR004734 Multidrug resistance protein BED34_14595 IPR004812 Drug resistance transporter Bcr/CmlA subfamily BED34_14595 IPR011701 Major facilitator superfamily BED34_14600 IPR006145 Pseudouridine synthase, RsuA/RluA BED34_14600 IPR020103 Pseudouridine synthase, catalytic domain superfamily BED34_14600 IPR002942 RNA-binding S4 domain BED34_14600 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain BED34_14600 IPR036986 RNA-binding S4 domain superfamily BED34_14600 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F BED34_14600 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site BED34_14605 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_14605 IPR011332 Zinc-binding ribosomal protein BED34_14605 IPR001650 Helicase, C-terminal BED34_14605 IPR014001 Helicase superfamily 1/2, ATP-binding domain BED34_14605 IPR006935 Helicase/UvrB, N-terminal BED34_14610 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal BED34_14610 IPR020055 Ribosomal protein L25, short-form BED34_14610 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily BED34_14610 IPR029751 Ribosomal protein L25 BED34_14615 IPR007358 Nucleoid-associated protein NdpA BED34_14620 IPR009857 Uncharacterised protein family UPF0352 BED34_14620 IPR023202 YejL-like superfamily BED34_14625 IPR012159 Inner membrane protein YejM BED34_14625 IPR000917 Sulfatase, N-terminal BED34_14625 IPR017850 Alkaline-phosphatase-like, core domain superfamily BED34_14625 IPR024588 Inner membrane protein YejM, N-terminal BED34_14645 IPR001207 Transposase, mutator type BED34_14655 IPR009057 Homeobox-like domain superfamily BED34_14655 IPR002514 Transposase IS3/IS911family BED34_14660 IPR038965 Transposase InsF-like BED34_14675 IPR001148 Alpha carbonic anhydrase domain BED34_14675 IPR018338 Carbonic anhydrase, alpha-class, conserved site BED34_14675 IPR036398 Alpha carbonic anhydrase domain superfamily BED34_14675 IPR023561 Carbonic anhydrase, alpha-class BED34_14675 IPR041891 Carbonic anhydrase, prokaryotic-like BED34_14680 IPR001360 Glycoside hydrolase family 1 BED34_14680 IPR018120 Glycoside hydrolase family 1, active site BED34_14680 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site BED34_14680 IPR017853 Glycoside hydrolase superfamily BED34_14685 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component BED34_14685 IPR001996 Phosphotransferase system, IIB component, type 1 BED34_14685 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component BED34_14685 IPR013013 Phosphotransferase system, EIIC component, type 1 BED34_14685 IPR011055 Duplicated hybrid motif BED34_14685 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 BED34_14685 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site BED34_14685 IPR036878 Glucose permease domain IIB BED34_14685 IPR003352 Phosphotransferase system, EIIC BED34_14690 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_14690 IPR001347 Sugar isomerase (SIS) BED34_14690 IPR035472 RpiR-like, SIS domain BED34_14690 IPR000281 Helix-turn-helix protein RpiR BED34_14690 IPR009057 Homeobox-like domain superfamily BED34_14710 IPR010534 Bacteriophage 933W, GpQ BED34_14720 IPR010391 DNA damage-inducible protein DinI-like BED34_14720 IPR036687 DinI-like superfamily BED34_14725 IPR020080 Outer membrane adhesin/peptidase omptin BED34_14725 IPR000036 Peptidase A26, omptin BED34_14725 IPR020079 Peptidase A26, omptin, conserved site BED34_14730 IPR004090 Chemotaxis methyl-accepting receptor BED34_14730 IPR000727 Target SNARE coiled-coil homology domain BED34_14730 IPR029151 Periplasmic sensor-like domain superfamily BED34_14730 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BED34_14730 IPR003660 HAMP domain BED34_14730 IPR033479 Double Cache domain 1 BED34_14735 IPR001279 Metallo-beta-lactamase BED34_14735 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D BED34_14735 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BED34_14740 IPR001927 Sodium:galactoside symporter BED34_14740 IPR039672 Lactose permease-like BED34_14740 IPR036259 MFS transporter superfamily BED34_14740 IPR018043 Sodium:galactoside symporter, conserved site BED34_14745 IPR001466 Beta-lactamase-related BED34_14745 IPR012338 Beta-lactamase/transpeptidase-like BED34_14760 IPR001702 Porin, Gram-negative type BED34_14760 IPR013793 Porin, Gram-negative type, conserved site BED34_14760 IPR001897 Porin, gammaproteobacterial BED34_14760 IPR023614 Porin domain superfamily BED34_14765 IPR010129 Type I secretion membrane fusion protein, HlyD family BED34_14765 IPR006144 Secretion protein HlyD, conserved site BED34_14775 IPR011701 Major facilitator superfamily BED34_14775 IPR020846 Major facilitator superfamily domain BED34_14775 IPR036259 MFS transporter superfamily BED34_14780 IPR005467 Histidine kinase domain BED34_14780 IPR030861 Phosphotransferase RcsD BED34_14780 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain BED34_14780 IPR038616 Phosphotransferase RcsD, RcsD-ABL domain superfamily BED34_14780 IPR003594 Histidine kinase/HSP90-like ATPase BED34_14780 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BED34_14780 IPR032306 Phosphotransferase RcsD, RcsD-ABL domain BED34_14780 IPR036641 HPT domain superfamily BED34_14785 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_14785 IPR000792 Transcription regulator LuxR, C-terminal BED34_14785 IPR011006 CheY-like superfamily BED34_14785 IPR030864 Transcriptional regulatory protein RcsB BED34_14785 IPR001789 Signal transduction response regulator, receiver domain BED34_14785 IPR016032 Signal transduction response regulator, C-terminal effector BED34_14790 IPR001789 Signal transduction response regulator, receiver domain BED34_14790 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal BED34_14790 IPR011006 CheY-like superfamily BED34_14790 IPR003594 Histidine kinase/HSP90-like ATPase BED34_14790 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BED34_14790 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BED34_14790 IPR005467 Histidine kinase domain BED34_14790 IPR038388 RcsC, C-terminal domain superfamily BED34_14790 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BED34_14790 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BED34_14790 IPR030856 Sensor histidine kinase RcsC BED34_14795 IPR005743 DNA gyrase, subunit A BED34_14795 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily BED34_14795 IPR013760 DNA topoisomerase, type IIA-like domain superfamily BED34_14795 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal BED34_14795 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat BED34_14795 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta BED34_14795 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal BED34_14800 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED34_14800 IPR010233 Ubiquinone biosynthesis O-methyltransferase BED34_14805 IPR039718 Ribonucleoside-diphosphate reductase large subunit BED34_14805 IPR000788 Ribonucleotide reductase large subunit, C-terminal BED34_14805 IPR013346 Ribonucleotide reductase, class I , alpha subunit BED34_14805 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal BED34_14805 IPR005144 ATP-cone domain BED34_14805 IPR013509 Ribonucleotide reductase large subunit, N-terminal BED34_14810 IPR000358 Ribonucleotide reductase small subunit family BED34_14810 IPR033909 Ribonucleotide reductase small subunit BED34_14810 IPR012348 Ribonucleotide reductase-like BED34_14810 IPR009078 Ferritin-like superfamily BED34_14810 IPR030475 Ribonucleotide reductase small subunit, acitve site BED34_14820 IPR023084 Proteinase inhibitor I11, ecotin, gammaproteobacteria BED34_14820 IPR036198 Ecotin superfamily BED34_14820 IPR005658 Proteinase inhibitor I11, ecotin BED34_14835 IPR036653 CinA-like, C-terminal BED34_14835 IPR008135 Competence-induced protein CinA BED34_14835 IPR036425 MoaB/Mog-like domain superfamily BED34_14835 IPR001453 MoaB/Mog domain BED34_14840 IPR013061 Tryptophan/tryrosine permease, conserved site BED34_14840 IPR018227 Amino acid/polyamine transporter 2 BED34_14840 IPR013059 Tryptophan/tyrosine transporter BED34_14845 IPR009998 YfaZ BED34_14845 IPR023614 Porin domain superfamily BED34_14845 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel BED34_14850 IPR020835 Catalase superfamily BED34_14850 IPR010582 Catalase immune-responsive domain BED34_14850 IPR002226 Catalase haem-binding site BED34_14850 IPR024708 Catalase active site BED34_14850 IPR040333 Catalase, clade 3 BED34_14850 IPR011614 Catalase core domain BED34_14850 IPR018028 Catalase, mono-functional, haem-containing BED34_14850 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 BED34_14850 IPR037060 Catalase core domain superfamily BED34_14855 IPR020845 AMP-binding, conserved site BED34_14855 IPR010192 2-succinylbenzoate--CoA ligase BED34_14855 IPR042099 AMP-dependent synthetase-like superfamily BED34_14855 IPR000873 AMP-dependent synthetase/ligase BED34_14855 IPR025110 AMP-binding enzyme, C-terminal domain BED34_14860 IPR036849 Enolase-like, C-terminal domain superfamily BED34_14860 IPR029017 Enolase-like, N-terminal BED34_14860 IPR029065 Enolase C-terminal domain-like BED34_14860 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal BED34_14860 IPR010196 o-Succinylbenzoate synthase, MenC type1 BED34_14865 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB BED34_14865 IPR029045 ClpP/crotonase-like domain superfamily BED34_14865 IPR001753 Enoyl-CoA hydratase/isomerase BED34_14865 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site BED34_14865 IPR014748 Enoyl-CoA hydratase, C-terminal BED34_14870 IPR029058 Alpha/Beta hydrolase fold BED34_14870 IPR000073 Alpha/beta hydrolase fold-1 BED34_14870 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase BED34_14875 IPR029035 DHS-like NAD/FAD-binding domain superfamily BED34_14875 IPR032264 Menaquinone biosynthesis protein MenD, middle domain BED34_14875 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding BED34_14875 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain BED34_14875 IPR029061 Thiamin diphosphate-binding fold BED34_14875 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase BED34_14880 IPR004561 Isochorismate synthase BED34_14880 IPR015890 Chorismate-utilising enzyme, C-terminal BED34_14880 IPR005801 ADC synthase BED34_14880 IPR034681 Isochorismate synthase MenF BED34_14885 IPR010279 Inner membrane protein YqjD/ElaB BED34_14890 IPR004786 6-phosphogluconate dehydratase BED34_14890 IPR037237 IlvD/EDD, N-terminal domain BED34_14890 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site BED34_14890 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase BED34_14890 IPR042096 Dihydroxy-acid dehydratase, C-terminal BED34_14895 IPR038084 GlcG-like domain superfamily BED34_14895 IPR010371 Uncharacterised protein family UPF0303 BED34_14895 IPR005624 Haem-degrading BED34_14900 IPR036259 MFS transporter superfamily BED34_14900 IPR020846 Major facilitator superfamily domain BED34_14900 IPR011701 Major facilitator superfamily BED34_14905 IPR036291 NAD(P)-binding domain superfamily BED34_14905 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain BED34_14905 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BED34_14910 IPR028082 Periplasmic binding protein-like I BED34_14910 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BED34_14910 IPR000843 LacI-type HTH domain BED34_14915 IPR002347 Short-chain dehydrogenase/reductase SDR BED34_14915 IPR036291 NAD(P)-binding domain superfamily BED34_14915 IPR020904 Short-chain dehydrogenase/reductase, conserved site BED34_14920 IPR006001 Carbohydrate kinase, thermoresistant glucokinase BED34_14920 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_14920 IPR031322 Shikimate kinase/gluconokinase BED34_14930 IPR009476 Protein of unknown function DUF1097 BED34_14940 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 BED34_14940 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit BED34_14945 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit BED34_14945 IPR003918 NADH:ubiquinone oxidoreductase BED34_14945 IPR010227 NADH-quinone oxidoreductase, chain M/4 BED34_14950 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal BED34_14950 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 BED34_14950 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit BED34_14950 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup BED34_14955 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K BED34_14955 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like BED34_14960 IPR042106 NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ BED34_14960 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 BED34_14965 IPR010226 NADH-quinone oxidoreductase, chain I BED34_14965 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BED34_14965 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BED34_14970 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H BED34_14970 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site BED34_14975 IPR009010 Aspartate decarboxylase-like domain superfamily BED34_14975 IPR010228 NADH:ubiquinone oxidoreductase, subunit G BED34_14975 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain BED34_14975 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding BED34_14975 IPR036010 2Fe-2S ferredoxin-like superfamily BED34_14975 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site BED34_14975 IPR006657 Molybdopterin dinucleotide-binding domain BED34_14975 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain BED34_14975 IPR006656 Molybdopterin oxidoreductase BED34_14980 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site BED34_14980 IPR011537 NADH ubiquinone oxidoreductase, F subunit BED34_14980 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain BED34_14980 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily BED34_14980 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain BED34_14980 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily BED34_14980 IPR019554 Soluble ligand binding domain BED34_14985 IPR042128 NuoE domain BED34_14985 IPR041921 NADH-quinone oxidoreductase subunit E, N-terminal BED34_14985 IPR002023 NADH-quinone oxidoreductase subunit E-like BED34_14985 IPR036249 Thioredoxin-like superfamily BED34_14990 IPR001135 NADH-quinone oxidoreductase, subunit D BED34_14990 IPR010218 NADH dehydrogenase, subunit C BED34_14990 IPR029014 [NiFe]-hydrogenase, large subunit BED34_14990 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily BED34_14990 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily BED34_14990 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit BED34_14990 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site BED34_14990 IPR023062 NADH dehydrogenase, subunit CD BED34_14990 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H BED34_14995 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit BED34_14995 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit BED34_15000 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily BED34_15000 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 BED34_15000 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid BED34_15005 IPR000847 Transcription regulator HTH, LysR BED34_15005 IPR005119 LysR, substrate-binding BED34_15005 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_15005 IPR036390 Winged helix DNA-binding domain superfamily BED34_15010 IPR015424 Pyridoxal phosphate-dependent transferase BED34_15010 IPR004839 Aminotransferase, class I/classII BED34_15010 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED34_15010 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED34_15015 IPR022971 5'-deoxynucleotidase YfbR BED34_15015 IPR003607 HD/PDEase domain BED34_15015 IPR039356 Metal-dependent nucleoside 5'-monophosphatase BED34_15020 IPR004680 Citrate transporter-like domain BED34_15020 IPR031312 Sodium/sulphate symporter, conserved site BED34_15020 IPR006037 Regulator of K+ conductance, C-terminal BED34_15020 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily BED34_15030 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BED34_15030 IPR041492 Haloacid dehalogenase-like hydrolase BED34_15030 IPR006439 HAD hydrolase, subfamily IA BED34_15030 IPR023214 HAD superfamily BED34_15030 IPR036412 HAD-like superfamily BED34_15035 IPR023145 YfbU, helix-hairpin domain superfamily BED34_15035 IPR023146 YfbU, alpha-helical bundle domain superfamily BED34_15035 IPR005587 Uncharacterised protein family UPF0304, YfbU BED34_15040 IPR007334 Uncharacterised protein family UPF0208 BED34_15045 IPR023865 Aliphatic acid kinase, short-chain, conserved site BED34_15045 IPR000890 Aliphatic acid kinase, short-chain BED34_15045 IPR004372 Acetate/propionate kinase BED34_15050 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_15050 IPR016475 Phosphate acetyltransferase, bacteria BED34_15050 IPR010766 DRTGG BED34_15050 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily BED34_15050 IPR042113 Phosphate acetyltransferase, domain 1 BED34_15050 IPR002505 Phosphate acetyl/butaryl transferase BED34_15050 IPR042112 Phosphate acetyltransferase, domain 2 BED34_15050 IPR004614 Phosphate acetyltransferase BED34_15055 IPR028082 Periplasmic binding protein-like I BED34_15055 IPR000843 LacI-type HTH domain BED34_15055 IPR001761 Periplasmic binding protein/LacI sugar binding domain BED34_15055 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BED34_15060 IPR016152 Phosphotransferase/anion transporter BED34_15060 IPR002178 PTS EIIA type-2 domain BED34_15070 IPR004703 Phosphotransferase system, sugar-specific permease component BED34_15075 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED34_15075 IPR003346 Transposase, IS116/IS110/IS902 BED34_15080 IPR024195 NUDIX hydrolase, YfcD, predicted BED34_15080 IPR000086 NUDIX hydrolase domain BED34_15080 IPR015797 NUDIX hydrolase-like domain superfamily BED34_15095 IPR010099 Epimerase family protein SDR39U1 BED34_15095 IPR013549 Domain of unknown function DUF1731 BED34_15095 IPR001509 NAD-dependent epimerase/dehydratase BED34_15095 IPR036291 NAD(P)-binding domain superfamily BED34_15105 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type BED34_15105 IPR017871 ABC transporter, conserved site BED34_15105 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_15105 IPR003593 AAA+ ATPase domain BED34_15105 IPR003439 ABC transporter-like BED34_15110 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED34_15110 IPR035906 MetI-like superfamily BED34_15110 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain BED34_15115 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED34_15115 IPR030199 Histidine transport system permease protein HisQ BED34_15115 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain BED34_15115 IPR035906 MetI-like superfamily BED34_15120 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter BED34_15120 IPR018313 Solute-binding protein family 3, conserved site BED34_15120 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BED34_15125 IPR036551 Flavin prenyltransferase-like BED34_15125 IPR004507 Flavin prenyltransferase UbiX-like BED34_15125 IPR003382 Flavoprotein BED34_15130 IPR029055 Nucleophile aminohydrolases, N-terminal BED34_15130 IPR035584 Amidophosphoribosyltransferase, N-terminal BED34_15130 IPR000836 Phosphoribosyltransferase domain BED34_15130 IPR029057 Phosphoribosyltransferase-like BED34_15130 IPR005854 Amidophosphoribosyltransferase BED34_15130 IPR017932 Glutamine amidotransferase type 2 domain BED34_15135 IPR003825 Colicin V production, CvpA BED34_15140 IPR032898 Cell division protein DedD BED34_15140 IPR036680 Sporulation-like domain superfamily BED34_15140 IPR007730 Sporulation-like domain BED34_15145 IPR013221 Mur ligase, central BED34_15145 IPR036615 Mur ligase, C-terminal domain superfamily BED34_15145 IPR036565 Mur-like, catalytic domain superfamily BED34_15145 IPR004101 Mur ligase, C-terminal BED34_15145 IPR018109 Folylpolyglutamate synthetase, conserved site BED34_15145 IPR001645 Folylpolyglutamate synthetase BED34_15150 IPR034733 Acetyl-CoA carboxylase BED34_15150 IPR041010 Acetyl-coA carboxylase zinc finger domain BED34_15150 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal BED34_15150 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit BED34_15150 IPR029045 ClpP/crotonase-like domain superfamily BED34_15155 IPR032816 SNARE associated Golgi protein BED34_15155 IPR032818 DedA family BED34_15160 IPR020103 Pseudouridine synthase, catalytic domain superfamily BED34_15160 IPR001406 Pseudouridine synthase I, TruA BED34_15160 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain BED34_15160 IPR020095 Pseudouridine synthase I, TruA, C-terminal BED34_15165 IPR036291 NAD(P)-binding domain superfamily BED34_15165 IPR012280 Semialdehyde dehydrogenase, dimerisation domain BED34_15165 IPR000534 Semialdehyde dehydrogenase, NAD-binding BED34_15170 IPR038251 PdxB, dimerisation domain superfamily BED34_15170 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site BED34_15170 IPR036291 NAD(P)-binding domain superfamily BED34_15170 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 BED34_15170 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain BED34_15170 IPR020921 Erythronate-4-phosphate dehydrogenase BED34_15170 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain BED34_15170 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BED34_15185 IPR000620 EamA domain BED34_15190 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED34_15190 IPR004839 Aminotransferase, class I/classII BED34_15190 IPR015424 Pyridoxal phosphate-dependent transferase BED34_15190 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED34_15195 IPR013766 Thioredoxin domain BED34_15195 IPR017937 Thioredoxin, conserved site BED34_15195 IPR036249 Thioredoxin-like superfamily BED34_15195 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant BED34_15205 IPR036249 Thioredoxin-like superfamily BED34_15205 IPR022910 Thiol:disulphide interchange protein DsbD BED34_15205 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily BED34_15205 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain BED34_15205 IPR013766 Thioredoxin domain BED34_15205 IPR017937 Thioredoxin, conserved site BED34_15205 IPR035671 DsbD gamma BED34_15205 IPR003834 Cytochrome C biogenesis protein, transmembrane domain BED34_15215 IPR023597 Flagellar regulator Flk BED34_15220 IPR004680 Citrate transporter-like domain BED34_15225 IPR029033 Histidine phosphatase superfamily BED34_15225 IPR000560 Histidine phosphatase superfamily, clade-2 BED34_15225 IPR033379 Histidine acid phosphatase active site BED34_15230 IPR028082 Periplasmic binding protein-like I BED34_15230 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BED34_15230 IPR000843 LacI-type HTH domain BED34_15230 IPR006377 Catabolite control protein A BED34_15235 IPR003501 Phosphotransferase system, EIIB component, type 2/3 BED34_15235 IPR013012 Phosphotransferase system, EIIB component, type 3 BED34_15235 IPR036095 PTS system IIB component-like superfamily BED34_15240 IPR003352 Phosphotransferase system, EIIC BED34_15240 IPR004796 Phosphotransferase system, cellobiose-type IIC component BED34_15240 IPR004501 Phosphotransferase system, EIIC component, type 3 BED34_15245 IPR017853 Glycoside hydrolase superfamily BED34_15245 IPR018120 Glycoside hydrolase family 1, active site BED34_15245 IPR001360 Glycoside hydrolase family 1 BED34_15250 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily BED34_15250 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit BED34_15260 IPR004380 Aspartate racemase BED34_15260 IPR033134 Asp/Glu racemase, active site 2 BED34_15260 IPR018187 Asp/Glu racemase, active site 1 BED34_15260 IPR015942 Asp/Glu/hydantoin racemase BED34_15260 IPR001920 Asp/Glu racemase BED34_15270 IPR000794 Beta-ketoacyl synthase BED34_15270 IPR018201 Beta-ketoacyl synthase, active site BED34_15270 IPR014031 Beta-ketoacyl synthase, C-terminal BED34_15270 IPR014030 Beta-ketoacyl synthase, N-terminal BED34_15270 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BED34_15270 IPR016039 Thiolase-like BED34_15275 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal BED34_15275 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC BED34_15275 IPR008471 MnmC-like methyltransferase BED34_15275 IPR036188 FAD/NAD(P)-binding domain superfamily BED34_15275 IPR006076 FAD dependent oxidoreductase BED34_15280 IPR014987 Uncharacterised protein family YfcL BED34_15285 IPR007411 Elongation factor P hydroxylase BED34_15290 IPR002781 Transmembrane protein TauE-like BED34_15295 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase BED34_15295 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily BED34_15300 IPR020541 Chorismate synthase, conserved site BED34_15300 IPR000453 Chorismate synthase BED34_15300 IPR035904 Chorismate synthase AroC superfamily BED34_15305 IPR002052 DNA methylase, N-6 adenine-specific, conserved site BED34_15305 IPR004556 Methyltransferase HemK-like BED34_15305 IPR007848 Methyltransferase small domain BED34_15305 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED34_15305 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase BED34_15310 IPR022990 Uncharacterised protein family UPF0115 BED34_15310 IPR036063 Smr domain superfamily BED34_15310 IPR002625 Smr domain BED34_15315 IPR004449 Phosphohistidine phosphatase SixA BED34_15315 IPR029033 Histidine phosphatase superfamily BED34_15315 IPR013078 Histidine phosphatase superfamily, clade-1 BED34_15320 IPR036291 NAD(P)-binding domain superfamily BED34_15320 IPR001753 Enoyl-CoA hydratase/isomerase BED34_15320 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BED34_15320 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal BED34_15320 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding BED34_15320 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site BED34_15320 IPR012802 Fatty oxidation complex, alpha subunit FadJ BED34_15320 IPR029045 ClpP/crotonase-like domain superfamily BED34_15325 IPR012806 Acetyl-CoA C-acyltransferase FadI BED34_15325 IPR020616 Thiolase, N-terminal BED34_15325 IPR020613 Thiolase, conserved site BED34_15325 IPR020610 Thiolase, active site BED34_15325 IPR020615 Thiolase, acyl-enzyme intermediate active site BED34_15325 IPR002155 Thiolase BED34_15325 IPR020617 Thiolase, C-terminal BED34_15325 IPR016039 Thiolase-like BED34_15330 IPR035571 UPF0234-like, C-terminal BED34_15330 IPR005272 Conserved hypothetical protein CHP00743 BED34_15335 IPR042117 OMPP1/FadL/TodX superfamily BED34_15335 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) BED34_15340 IPR007428 MlaA lipoprotein BED34_15345 IPR019734 Tetratricopeptide repeat BED34_15345 IPR011990 Tetratricopeptide-like helical domain superfamily BED34_15345 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily BED34_15345 IPR005616 CcmH/CycL/Ccl2/NrfF family BED34_15345 IPR013026 Tetratricopeptide repeat-containing domain BED34_15350 IPR017560 Cytochrome c-type biogenesis protein CcmI BED34_15350 IPR019734 Tetratricopeptide repeat BED34_15350 IPR013026 Tetratricopeptide repeat-containing domain BED34_15350 IPR011990 Tetratricopeptide-like helical domain superfamily BED34_15350 IPR005616 CcmH/CycL/Ccl2/NrfF family BED34_15350 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily BED34_15355 IPR013766 Thioredoxin domain BED34_15355 IPR036249 Thioredoxin-like superfamily BED34_15355 IPR013740 Redoxin BED34_15355 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE BED34_15355 IPR017937 Thioredoxin, conserved site BED34_15360 IPR003568 Cytochrome c-type biogenesis protein CcmF BED34_15360 IPR003567 Cytochrome c-type biogenesis protein BED34_15360 IPR002541 Cytochrome c assembly protein BED34_15360 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal BED34_15365 IPR004329 CcmE/CycJ protein BED34_15365 IPR036127 CcmE-like superfamily BED34_15370 IPR007078 Haem exporter protein D (CcmD) BED34_15375 IPR003557 Cytochrome c-type biogenesis protein CcmC BED34_15375 IPR002541 Cytochrome c assembly protein BED34_15380 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria BED34_15380 IPR003544 Cytochrome c-type biogenesis protein CcmB BED34_15385 IPR003593 AAA+ ATPase domain BED34_15385 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_15385 IPR017871 ABC transporter, conserved site BED34_15385 IPR005895 ABC transporter, haem export, CcmA BED34_15385 IPR003439 ABC transporter-like BED34_15390 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED34_15390 IPR003346 Transposase, IS116/IS110/IS902 BED34_15395 IPR000292 Formate/nitrite transporter BED34_15395 IPR023271 Aquaporin-like BED34_15405 IPR013762 Integrase-like, catalytic domain superfamily BED34_15405 IPR002104 Integrase, catalytic domain BED34_15405 IPR038488 Integrase, DNA-binding domain superfamily BED34_15405 IPR025166 Integrase, DNA-binding domain BED34_15405 IPR010998 Integrase/recombinase, N-terminal BED34_15405 IPR011010 DNA breaking-rejoining enzyme, catalytic core BED34_15405 IPR004107 Integrase, SAM-like, N-terminal BED34_15465 IPR004624 PhnA protein BED34_15465 IPR013988 PhnA protein, C-terminal BED34_15465 IPR013987 PhnA protein, N-terminal BED34_15470 IPR005149 Transcription regulator PadR, N-terminal BED34_15470 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_15470 IPR036390 Winged helix DNA-binding domain superfamily BED34_15480 IPR018120 Glycoside hydrolase family 1, active site BED34_15480 IPR017853 Glycoside hydrolase superfamily BED34_15480 IPR001360 Glycoside hydrolase family 1 BED34_15480 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site BED34_15485 IPR001996 Phosphotransferase system, IIB component, type 1 BED34_15485 IPR013013 Phosphotransferase system, EIIC component, type 1 BED34_15485 IPR003352 Phosphotransferase system, EIIC BED34_15485 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site BED34_15485 IPR036878 Glucose permease domain IIB BED34_15485 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component BED34_15490 IPR000843 LacI-type HTH domain BED34_15490 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BED34_15490 IPR028082 Periplasmic binding protein-like I BED34_15495 IPR007372 Lipid/polyisoprenoid-binding, YceI-like BED34_15495 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily BED34_15495 IPR023480 Uncharacterised protein family UPF0312/YceI BED34_15500 IPR016174 Di-haem cytochrome, transmembrane BED34_15500 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase BED34_15505 IPR013094 Alpha/beta hydrolase fold-3 BED34_15505 IPR013830 SGNH hydrolase-type esterase domain BED34_15505 IPR036514 SGNH hydrolase superfamily BED34_15505 IPR029058 Alpha/Beta hydrolase fold BED34_15525 IPR017871 ABC transporter, conserved site BED34_15525 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_15525 IPR003593 AAA+ ATPase domain BED34_15525 IPR003439 ABC transporter-like BED34_15525 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl BED34_15530 IPR003453 ABC transport permease subunit MlaE, Proteobacteria BED34_15530 IPR030802 ABC transporter permease MalE BED34_15535 IPR036259 MFS transporter superfamily BED34_15535 IPR020846 Major facilitator superfamily domain BED34_15535 IPR011701 Major facilitator superfamily BED34_15545 IPR033932 YtcJ like BED34_15545 IPR032466 Metal-dependent hydrolase BED34_15545 IPR011059 Metal-dependent hydrolase, composite domain superfamily BED34_15545 IPR013108 Amidohydrolase 3 BED34_15550 IPR004841 Amino acid permease/ SLC12A domain BED34_15555 IPR011757 Lytic transglycosylase MltB BED34_15555 IPR023346 Lysozyme-like domain superfamily BED34_15555 IPR031304 Transglycosylase SLT domain 2 BED34_15560 IPR006061 Solute-binding family 1, conserved site BED34_15560 IPR026045 Ferric binding protein BED34_15565 IPR035906 MetI-like superfamily BED34_15565 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED34_15570 IPR003593 AAA+ ATPase domain BED34_15570 IPR003439 ABC transporter-like BED34_15570 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_15570 IPR030287 Fe(3+) ions import ATP-binding protein FbpC BED34_15570 IPR015853 ABC transporter, ferric cation import, FbpC BED34_15570 IPR017871 ABC transporter, conserved site BED34_15585 IPR035069 TTHA1013/TTHA0281-like BED34_15590 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase BED34_15590 IPR016174 Di-haem cytochrome, transmembrane BED34_15595 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED34_15595 IPR004839 Aminotransferase, class I/classII BED34_15595 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED34_15595 IPR015424 Pyridoxal phosphate-dependent transferase BED34_15605 IPR010856 Protein of unknown function DUF1479 BED34_15605 IPR027443 Isopenicillin N synthase-like BED34_15615 IPR007492 LytTR DNA-binding domain BED34_15615 IPR001789 Signal transduction response regulator, receiver domain BED34_15615 IPR011006 CheY-like superfamily BED34_15625 IPR003836 Glucokinase BED34_15635 IPR000847 Transcription regulator HTH, LysR BED34_15635 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_15635 IPR005119 LysR, substrate-binding BED34_15635 IPR036390 Winged helix DNA-binding domain superfamily BED34_15640 IPR012000 Thiamine pyrophosphate enzyme, central domain BED34_15640 IPR000399 TPP-binding enzyme, conserved site BED34_15640 IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme BED34_15640 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding BED34_15640 IPR029061 Thiamin diphosphate-binding fold BED34_15640 IPR017764 Indole-3-pyruvate decarboxylase, Enterobacteriaceae BED34_15640 IPR029035 DHS-like NAD/FAD-binding domain superfamily BED34_15640 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain BED34_15645 IPR023210 NADP-dependent oxidoreductase domain BED34_15645 IPR036812 NADP-dependent oxidoreductase domain superfamily BED34_15655 IPR001046 NRAMP family BED34_15660 IPR011657 Concentrative nucleoside transporter C-terminal domain BED34_15660 IPR002668 Concentrative nucleoside transporter N-terminal domain BED34_15660 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial BED34_15660 IPR008276 Concentrative nucleoside transporter BED34_15660 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain BED34_15690 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 BED34_15690 IPR033910 Glutamyl-tRNA synthetase BED34_15690 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site BED34_15690 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial BED34_15690 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED34_15690 IPR000924 Glutamyl/glutaminyl-tRNA synthetase BED34_15690 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding BED34_15690 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain BED34_15715 IPR024530 Putative quorum-sensing-regulated virulence factor BED34_15720 IPR001357 BRCT domain BED34_15720 IPR013840 NAD-dependent DNA ligase, N-terminal BED34_15720 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type BED34_15720 IPR010994 RuvA domain 2-like BED34_15720 IPR041663 DisA/LigA, helix-hairpin-helix motif BED34_15720 IPR004150 NAD-dependent DNA ligase, OB-fold BED34_15720 IPR033136 NAD-dependent DNA ligase, conserved site BED34_15720 IPR001679 NAD-dependent DNA ligase BED34_15720 IPR012340 Nucleic acid-binding, OB-fold BED34_15720 IPR013839 NAD-dependent DNA ligase, adenylation BED34_15720 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 BED34_15720 IPR018239 NAD-dependent DNA ligase, active site BED34_15720 IPR036420 BRCT domain superfamily BED34_15725 IPR007449 ZipA, C-terminal FtsZ-binding domain BED34_15725 IPR011919 Cell division protein ZipA BED34_15725 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily BED34_15730 IPR022985 Sulfate transporter CysZ BED34_15735 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site BED34_15735 IPR005856 Cysteine synthase BED34_15735 IPR005859 Cysteine synthase CysK BED34_15735 IPR001926 Pyridoxal-phosphate dependent enzyme BED34_15735 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BED34_15740 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site BED34_15740 IPR002114 Phosphotransferase system, HPr serine phosphorylation site BED34_15740 IPR000032 Phosphocarrier protein HPr-like BED34_15740 IPR035895 HPr-like superfamily BED34_15745 IPR008279 PEP-utilising enzyme, mobile domain BED34_15745 IPR018274 PEP-utilising enzyme, active site BED34_15745 IPR000121 PEP-utilising enzyme, C-terminal BED34_15745 IPR023151 PEP-utilising enzyme, conserved site BED34_15745 IPR036637 Phosphohistidine domain superfamily BED34_15745 IPR006318 Phosphotransferase system, enzyme I-like BED34_15745 IPR008731 Phosphotransferase system, enzyme I N-terminal BED34_15745 IPR040442 Pyruvate kinase-like domain superfamily BED34_15745 IPR024692 Phosphotransferase system, enzyme I BED34_15745 IPR036618 PtsI, HPr-binding domain superfamily BED34_15745 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily BED34_15750 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 BED34_15750 IPR011055 Duplicated hybrid motif BED34_15755 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BED34_15755 IPR005467 Histidine kinase domain BED34_15755 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BED34_15755 IPR003660 HAMP domain BED34_15755 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BED34_15755 IPR032404 Two-component sensor protein CpxA, periplasmic domain BED34_15755 IPR003594 Histidine kinase/HSP90-like ATPase BED34_15755 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BED34_15755 IPR038515 CpxA, periplasmic domain superfamily BED34_15760 IPR001789 Signal transduction response regulator, receiver domain BED34_15760 IPR001867 OmpR/PhoB-type DNA-binding domain BED34_15760 IPR011006 CheY-like superfamily BED34_15760 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_15760 IPR039420 Transcriptional regulatory protein WalR-like BED34_15765 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BED34_15765 IPR030190 Macrolide export protein MacA BED34_15765 IPR006143 RND efflux pump, membrane fusion protein BED34_15770 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_15770 IPR003439 ABC transporter-like BED34_15770 IPR025857 MacB-like periplasmic core domain BED34_15770 IPR017871 ABC transporter, conserved site BED34_15770 IPR017911 ABC transporter, macrolide export, ATP-binding domain BED34_15770 IPR003593 AAA+ ATPase domain BED34_15770 IPR003838 ABC transporter permease protein domain BED34_15775 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BED34_15775 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site BED34_15775 IPR005858 Cysteine synthase CysM BED34_15775 IPR005856 Cysteine synthase BED34_15775 IPR001926 Pyridoxal-phosphate dependent enzyme BED34_15780 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_15780 IPR008995 Molybdate/tungstate binding, C-terminal BED34_15780 IPR005666 Sulphate transport system permease protein 1 BED34_15780 IPR003439 ABC transporter-like BED34_15780 IPR017871 ABC transporter, conserved site BED34_15780 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal BED34_15780 IPR003593 AAA+ ATPase domain BED34_15785 IPR011866 Sulphate ABC transporter, permease protein CysW BED34_15785 IPR005667 Sulphate ABC transporter permease protein 2 BED34_15785 IPR035906 MetI-like superfamily BED34_15785 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED34_15790 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED34_15790 IPR011865 Sulphate ABC transporter, permease protein CysT BED34_15790 IPR035906 MetI-like superfamily BED34_15790 IPR005667 Sulphate ABC transporter permease protein 2 BED34_15795 IPR005669 Thiosulphate/Sulfate-binding protein BED34_15795 IPR034408 Sulphate/thiosulphate-binding site BED34_15795 IPR000957 Sulphate/thiosulphate-binding, conserved site BED34_15800 IPR011701 Major facilitator superfamily BED34_15800 IPR004742 Sialic acid transporter BED34_15800 IPR036259 MFS transporter superfamily BED34_15800 IPR020846 Major facilitator superfamily domain BED34_15805 IPR035472 RpiR-like, SIS domain BED34_15805 IPR001347 Sugar isomerase (SIS) BED34_15805 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_15805 IPR000281 Helix-turn-helix protein RpiR BED34_15805 IPR009057 Homeobox-like domain superfamily BED34_15810 IPR004375 YhcH/YjgK/YiaL family BED34_15810 IPR037012 YhcH/YjgK/YiaL superfamily BED34_15815 IPR000600 ROK family BED34_15815 IPR023945 N-acetylmannosamine kinase, bacterial BED34_15820 IPR011060 Ribulose-phosphate binding barrel BED34_15820 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase BED34_15820 IPR013785 Aldolase-type TIM barrel BED34_15825 IPR020625 Schiff base-forming aldolase, active site BED34_15825 IPR005264 N-acetylneuraminate lyase BED34_15825 IPR002220 DapA-like BED34_15825 IPR013785 Aldolase-type TIM barrel BED34_15830 IPR003346 Transposase, IS116/IS110/IS902 BED34_15830 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED34_15835 IPR011008 Dimeric alpha-beta barrel BED34_15835 IPR006314 Dyp-type peroxidase BED34_15840 IPR010938 Protein of unknown function DUF1131 BED34_15840 IPR038714 YfeY-like superfamily BED34_15845 IPR036700 Bacterial OB-fold superfamily BED34_15845 IPR005220 Bacterial OB-fold BED34_15845 IPR016052 Bacteriophage 933W, L0136 BED34_15850 IPR000182 GNAT domain BED34_15850 IPR016181 Acyl-CoA N-acyltransferase BED34_15850 IPR023072 Acetyltransferase, YpeA BED34_15855 IPR001260 Coproporphyrinogen III oxidase, aerobic BED34_15855 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily BED34_15855 IPR018375 Coproporphyrinogen III oxidase, conserved site BED34_15860 IPR003791 Protein of unknown function UPF0178 BED34_15870 IPR037062 Malic enzyme, N-terminal domain superfamily BED34_15870 IPR012302 Malic enzyme, NAD-binding BED34_15870 IPR042112 Phosphate acetyltransferase, domain 2 BED34_15870 IPR002505 Phosphate acetyl/butaryl transferase BED34_15870 IPR012188 NAD(P)-dependent malic enzyme BED34_15870 IPR012301 Malic enzyme, N-terminal domain BED34_15870 IPR015884 Malic enzyme, conserved site BED34_15870 IPR036291 NAD(P)-binding domain superfamily BED34_15870 IPR042113 Phosphate acetyltransferase, domain 1 BED34_15875 IPR015797 NUDIX hydrolase-like domain superfamily BED34_15875 IPR000086 NUDIX hydrolase domain BED34_15875 IPR004385 Nucleoside diphosphate pyrophosphatase BED34_15885 IPR036280 Multiheme cytochrome superfamily BED34_15885 IPR011031 Multihaem cytochrome BED34_15885 IPR005591 Nitrate reductase cytochrome c-type subunit NapB BED34_15890 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site BED34_15890 IPR006656 Molybdopterin oxidoreductase BED34_15890 IPR010051 Periplasmic nitrate reductase, large subunit BED34_15890 IPR006311 Twin-arginine translocation pathway, signal sequence BED34_15890 IPR006657 Molybdopterin dinucleotide-binding domain BED34_15890 IPR041957 Nitrate reductase NapA-like, molybdopterin-binding domain BED34_15890 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain BED34_15890 IPR009010 Aspartate decarboxylase-like domain superfamily BED34_15890 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal BED34_15895 IPR005623 Chaperone NapD, nitrate reductase assembly BED34_15905 IPR000792 Transcription regulator LuxR, C-terminal BED34_15905 IPR001789 Signal transduction response regulator, receiver domain BED34_15905 IPR011006 CheY-like superfamily BED34_15905 IPR016032 Signal transduction response regulator, C-terminal effector BED34_15915 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 BED34_15915 IPR001036 Acriflavin resistance protein BED34_15915 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BED34_15935 IPR036249 Thioredoxin-like superfamily BED34_15935 IPR006504 Transcriptional regulator Spx/MgsR BED34_15935 IPR006660 Arsenate reductase-like BED34_15940 IPR036264 Bacterial exopeptidase dimerisation domain BED34_15940 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria BED34_15940 IPR002933 Peptidase M20 BED34_15940 IPR011650 Peptidase M20, dimerisation domain BED34_15940 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site BED34_15945 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily BED34_15945 IPR003709 Peptidase M15B BED34_15950 IPR020910 Uncharacterised protein family UPF0370 BED34_15965 IPR000758 Virulence-related outer membrane protein BED34_15965 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel BED34_15965 IPR027385 Outer membrane protein beta-barrel domain BED34_15980 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED34_15980 IPR003346 Transposase, IS116/IS110/IS902 BED34_15985 IPR004929 Spanin, inner membrane subunit BED34_15990 IPR029058 Alpha/Beta hydrolase fold BED34_15990 IPR003140 Phospholipase/carboxylesterase/thioesterase BED34_16005 IPR016181 Acyl-CoA N-acyltransferase BED34_16005 IPR007807 Helicase domain BED34_16005 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA BED34_16005 IPR033442 tRNA(Met) cytidine acetyltransferase TmcA, tRNA-binding domain BED34_16005 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_16005 IPR000182 GNAT domain BED34_16005 IPR038321 TmcA, C-terminal domain superfamily BED34_16005 IPR032672 TmcA/NAT10/Kre33 BED34_16010 IPR007382 Uncharacterised protein family UPF0756, transmembrame BED34_16015 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative BED34_16020 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase BED34_16020 IPR033934 Bacterial and archaeal 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide synthase BED34_16020 IPR018236 SAICAR synthetase, conserved site BED34_16020 IPR028923 SAICAR synthetase/ADE2, N-terminal BED34_16025 IPR010653 NlpB/DapX lipoprotein BED34_16025 IPR042268 Outer membrane protein assembly factor BamC, C-terminal BED34_16025 IPR014524 Outer membrane protein assembly factor BamC BED34_16030 IPR020624 Schiff base-forming aldolase, conserved site BED34_16030 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA BED34_16030 IPR013785 Aldolase-type TIM barrel BED34_16030 IPR002220 DapA-like BED34_16030 IPR020625 Schiff base-forming aldolase, active site BED34_16035 IPR016867 Glycine cleavage system transcriptional repressor BED34_16035 IPR002912 ACT domain BED34_16040 IPR036249 Thioredoxin-like superfamily BED34_16040 IPR013766 Thioredoxin domain BED34_16040 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant BED34_16040 IPR024706 Peroxiredoxin, AhpC-type BED34_16045 IPR002549 Transmembrane protein TqsA-like BED34_16050 IPR011990 Tetratricopeptide-like helical domain superfamily BED34_16050 IPR011716 Tetratricopeptide TPR-3 BED34_16050 IPR001915 Peptidase M48 BED34_16050 IPR030873 Beta-barrel assembly-enhancing protease BED34_16055 IPR006660 Arsenate reductase-like BED34_16055 IPR036249 Thioredoxin-like superfamily BED34_16055 IPR006659 Arsenate reductase BED34_16060 IPR022864 DnaA regulatory inactivator Hda, Enterobacteriaceae BED34_16060 IPR013317 Chromosomal replication initiator protein DnaA BED34_16060 IPR020591 Chromosomal replication control, initiator DnaA-like BED34_16060 IPR017788 DnaA regulatory inactivator Hda BED34_16060 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_16065 IPR006043 Xanthine/uracil/vitamin C permease BED34_16065 IPR006042 Xanthine/uracil permease BED34_16065 IPR029935 Uracil permease BED34_16070 IPR029057 Phosphoribosyltransferase-like BED34_16070 IPR005765 Uracil phosphoribosyl transferase BED34_16070 IPR034332 Uracil phosphoribosyltransferase, bacterial-type BED34_16070 IPR000836 Phosphoribosyltransferase domain BED34_16080 IPR004607 Phosphoribosylglycinamide formyltransferase BED34_16080 IPR001555 Phosphoribosylglycinamide formyltransferase, active site BED34_16080 IPR036477 Formyl transferase, N-terminal domain superfamily BED34_16080 IPR002376 Formyl transferase, N-terminal BED34_16085 IPR016181 Acyl-CoA N-acyltransferase BED34_16085 IPR000182 GNAT domain BED34_16095 IPR003593 AAA+ ATPase domain BED34_16095 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_16095 IPR015850 ABC transporter, phosphate import, PstB BED34_16095 IPR005670 Phosphate transport system permease protein 1 BED34_16095 IPR017871 ABC transporter, conserved site BED34_16095 IPR003439 ABC transporter-like BED34_16100 IPR035906 MetI-like superfamily BED34_16100 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED34_16100 IPR005672 Phosphate transport system permease protein PstA BED34_16105 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED34_16105 IPR011864 Phosphate ABC transporter, permease protein PstC BED34_16105 IPR035906 MetI-like superfamily BED34_16110 IPR036832 Polyphosphate kinase N-terminal domain superfamily BED34_16110 IPR041108 Polyphosphate kinase, C-terminal domain 1 BED34_16110 IPR025200 Polyphosphate kinase C-terminal domain 2 BED34_16110 IPR025198 Polyphosphate kinase N-terminal domain BED34_16110 IPR024953 Polyphosphate kinase middle domain BED34_16110 IPR036830 Polyphosphate kinase middle domain superfamily BED34_16110 IPR001736 Phospholipase D/Transphosphatidylase BED34_16110 IPR003414 Polyphosphate kinase BED34_16115 IPR003695 Ppx/GppA phosphatase BED34_16115 IPR030673 Pyrophosphatase, GppA/Ppx-type BED34_16115 IPR022371 Exopolyphosphatase BED34_16130 IPR029787 Nucleotide cyclase BED34_16130 IPR007895 MASE1 BED34_16130 IPR001610 PAC motif BED34_16130 IPR035965 PAS domain superfamily BED34_16130 IPR013656 PAS fold-4 BED34_16130 IPR000700 PAS-associated, C-terminal BED34_16130 IPR000014 PAS domain BED34_16130 IPR035919 EAL domain superfamily BED34_16130 IPR013655 PAS fold-3 BED34_16130 IPR001633 EAL domain BED34_16130 IPR000160 GGDEF domain BED34_16135 IPR013126 Heat shock protein 70 family BED34_16135 IPR042054 YegD-like BED34_16135 IPR018181 Heat shock protein 70, conserved site BED34_16140 IPR039562 Membrane fusion protein, biotin-lipoyl like domain BED34_16140 IPR022824 Multidrug resistance protein MdtA BED34_16140 IPR006143 RND efflux pump, membrane fusion protein BED34_16145 IPR022831 Multidrug resistance protein MdtB BED34_16145 IPR001036 Acriflavin resistance protein BED34_16145 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BED34_16150 IPR023931 Multidrug resistance protein MdtC BED34_16150 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BED34_16150 IPR001036 Acriflavin resistance protein BED34_16155 IPR011701 Major facilitator superfamily BED34_16155 IPR020846 Major facilitator superfamily domain BED34_16155 IPR023721 Multidrug resistance protein MdtD BED34_16155 IPR036259 MFS transporter superfamily BED34_16160 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BED34_16160 IPR003594 Histidine kinase/HSP90-like ATPase BED34_16160 IPR005467 Histidine kinase domain BED34_16160 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BED34_16160 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BED34_16160 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BED34_16160 IPR003660 HAMP domain BED34_16165 IPR011006 CheY-like superfamily BED34_16165 IPR016032 Signal transduction response regulator, C-terminal effector BED34_16165 IPR001867 OmpR/PhoB-type DNA-binding domain BED34_16165 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_16165 IPR001789 Signal transduction response regulator, receiver domain BED34_16165 IPR039420 Transcriptional regulatory protein WalR-like BED34_16170 IPR010879 Domain of unknown function DUF1508 BED34_16170 IPR036913 YegP-like superfamily BED34_16180 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal BED34_16180 IPR005218 Diacylglycerol/lipid kinase BED34_16180 IPR001206 Diacylglycerol kinase, catalytic domain BED34_16180 IPR022433 Lipid kinase YegS BED34_16180 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily BED34_16185 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor BED34_16190 IPR004702 Phosphotransferease, sorbitol phosphotransferase enzyme II BED34_16190 IPR011618 Sorbitol phosphotransferase enzyme II, N-terminal BED34_16190 IPR011638 Sorbitol phosphotransferase enzyme II, C-terminal BED34_16195 IPR018454 Phosphotransferase system, glucitol/sorbitol-specific IIA component, subgroup BED34_16195 IPR036665 Phosphotransferase system, glucitol/sorbitol-specific IIA component superfamily BED34_16195 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component BED34_16200 IPR002347 Short-chain dehydrogenase/reductase SDR BED34_16200 IPR036291 NAD(P)-binding domain superfamily BED34_16200 IPR020904 Short-chain dehydrogenase/reductase, conserved site BED34_16205 IPR009693 Glucitol operon activator BED34_16210 IPR014036 DeoR C-terminal sensor domain BED34_16210 IPR001034 DeoR-type HTH domain BED34_16210 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_16210 IPR037171 NagB/RpiA transferase-like BED34_16210 IPR036390 Winged helix DNA-binding domain superfamily BED34_16210 IPR018356 Transcription regulator, HTH DeoR-type, conserved site BED34_16215 IPR035474 KpsF-like, SIS domain BED34_16215 IPR000644 CBS domain BED34_16215 IPR001347 Sugar isomerase (SIS) BED34_16215 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type BED34_16220 IPR036501 Inhibitor of vertebrate lysozyme superfamily BED34_16220 IPR014453 Inhibitor of vertebrate lysozyme BED34_16230 IPR029056 Ribokinase-like BED34_16230 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase BED34_16230 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase BED34_16260 IPR001207 Transposase, mutator type BED34_16300 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED34_16300 IPR003346 Transposase, IS116/IS110/IS902 BED34_16305 IPR009056 Cytochrome c-like domain BED34_16305 IPR008168 Cytochrome c, class IC BED34_16305 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit BED34_16305 IPR036909 Cytochrome c-like domain superfamily BED34_16325 IPR022955 GMP synthase BED34_16325 IPR001674 GMP synthase, C-terminal BED34_16325 IPR017926 Glutamine amidotransferase BED34_16325 IPR004739 GMP synthase, glutamine amidotransferase BED34_16325 IPR025777 GMP synthetase ATP pyrophosphatase domain BED34_16325 IPR029062 Class I glutamine amidotransferase-like BED34_16325 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED34_16325 IPR022310 NAD/GMP synthase BED34_16330 IPR013785 Aldolase-type TIM barrel BED34_16330 IPR000644 CBS domain BED34_16330 IPR005990 Inosine-5'-monophosphate dehydrogenase BED34_16330 IPR015875 IMP dehydrogenase / GMP reductase, conserved site BED34_16330 IPR001093 IMP dehydrogenase/GMP reductase BED34_16335 IPR025824 OB-fold nucleic acid binding domain BED34_16335 IPR020579 Exonuclease VII, large subunit, C-terminal BED34_16335 IPR003753 Exonuclease VII, large subunit BED34_16340 IPR029037 YfgJ-like BED34_16340 IPR010807 Protein of unknown function DUF1407 BED34_16350 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED34_16350 IPR003346 Transposase, IS116/IS110/IS902 BED34_16355 IPR006073 GTP binding domain BED34_16355 IPR005225 Small GTP-binding protein domain BED34_16355 IPR031166 EngA-type guanine nucleotide-binding (G) domain BED34_16355 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_16355 IPR032859 GTPase Der, C-terminal KH-domain-like BED34_16355 IPR015946 K homology domain-like, alpha/beta BED34_16355 IPR016484 GTP-binding protein EngA BED34_16365 IPR017687 Outer membrane protein assembly factor BamB BED34_16365 IPR002372 Pyrrolo-quinoline quinone repeat BED34_16365 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily BED34_16365 IPR015943 WD40/YVTN repeat-like-containing domain superfamily BED34_16365 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BED34_16375 IPR006195 Aminoacyl-tRNA synthetase, class II BED34_16375 IPR033656 Histidyl-anticodon-binding BED34_16375 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit BED34_16375 IPR004154 Anticodon-binding BED34_16375 IPR036621 Anticodon-binding domain superfamily BED34_16375 IPR015807 Histidine-tRNA ligase BED34_16375 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain BED34_16380 IPR011005 Dihydropteroate synthase-like BED34_16380 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type BED34_16380 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial BED34_16385 IPR023690 Cytoskeleton protein RodZ BED34_16385 IPR001387 Cro/C1-type helix-turn-helix domain BED34_16385 IPR025194 Domain of unknown function DUF4115 BED34_16385 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BED34_16395 IPR007197 Radical SAM BED34_16395 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr BED34_16395 IPR013785 Aldolase-type TIM barrel BED34_16395 IPR027492 Dual-specificity RNA methyltransferase RlmN BED34_16395 IPR040072 Methyltransferase (Class A) BED34_16400 IPR034907 Nucleoside diphosphate kinase-like domain BED34_16400 IPR001564 Nucleoside diphosphate kinase BED34_16400 IPR023005 Nucleoside diphosphate kinase, active site BED34_16400 IPR036850 Nucleoside diphosphate kinase-like domain superfamily BED34_16410 IPR001460 Penicillin-binding protein, transpeptidase BED34_16410 IPR012338 Beta-lactamase/transpeptidase-like BED34_16410 IPR001264 Glycosyl transferase, family 51 BED34_16410 IPR036950 Penicillin binding protein transglycosylase domain BED34_16410 IPR011815 Penicillin-binding protein 1C BED34_16410 IPR023346 Lysozyme-like domain superfamily BED34_16410 IPR009647 Penicillin-binding, C-terminal BED34_16415 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid BED34_16415 IPR002890 Macroglobulin domain BED34_16415 IPR041246 Bacterial alpha-2-macroglobulin MG10 domain BED34_16415 IPR041203 Bacterial Alpha-2-macroglobulin, MG5 domain BED34_16415 IPR041462 Bacterial Alpha-2-macroglobulin, MG6 domain BED34_16415 IPR021868 Alpha-2-macroglobulin MG3 domain BED34_16415 IPR011626 Alpha-macroglobulin-like, TED domain BED34_16415 IPR040639 Alpha-2-macroglobulin, MG1 domain BED34_16415 IPR026284 Alpha-2-macroglobulin, bacteria BED34_16415 IPR001599 Alpha-2-macroglobulin BED34_16415 IPR011625 Alpha-2-macroglobulin, bait region domain BED34_16420 IPR011050 Pectin lyase fold/virulence factor BED34_16420 IPR004899 Pertactin, central region BED34_16420 IPR006315 Outer membrane autotransporter barrel BED34_16420 IPR005546 Autotransporter beta-domain BED34_16420 IPR030930 Adhesin of bacterial autotransporter system BED34_16420 IPR036709 Autotransporter beta-domain superfamily BED34_16420 IPR012332 P22 tailspike-like, C-terminal domain superfamily BED34_16420 IPR003991 Pertactin virulence factor family BED34_16425 IPR027945 SseB protein, C-terminal BED34_16425 IPR009839 SseB protein N-terminal domain BED34_16430 IPR001346 Interferon regulatory factor DNA-binding domain BED34_16430 IPR008330 Peptidase M17, peptidase B BED34_16430 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal BED34_16430 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B BED34_16435 IPR036762 IscX-like superfamily BED34_16435 IPR007479 ISC system FeS cluster assembly, IscX BED34_16440 IPR036010 2Fe-2S ferredoxin-like superfamily BED34_16440 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain BED34_16440 IPR012675 Beta-grasp domain superfamily BED34_16440 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria BED34_16440 IPR018298 Adrenodoxin, iron-sulphur binding site BED34_16440 IPR001055 Adrenodoxin BED34_16445 IPR042039 HscA chaperone, nucleotide-binding domain BED34_16445 IPR010236 ISC system FeS cluster assembly, HscA chaperone BED34_16445 IPR018181 Heat shock protein 70, conserved site BED34_16445 IPR013126 Heat shock protein 70 family BED34_16445 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily BED34_16445 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily BED34_16450 IPR036869 Chaperone J-domain superfamily BED34_16450 IPR001623 DnaJ domain BED34_16450 IPR036386 HscB, C-terminal domain superfamily BED34_16450 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain BED34_16450 IPR004640 Co-chaperone Hsc20 BED34_16455 IPR035903 HesB-like domain superfamily BED34_16455 IPR011302 Iron-binding protein IscA, proteobacteria BED34_16455 IPR016092 FeS cluster insertion protein BED34_16455 IPR000361 FeS cluster biogenesis BED34_16455 IPR017870 FeS cluster insertion, C-terminal, conserved site BED34_16460 IPR011339 ISC system FeS cluster assembly, IscU scaffold BED34_16460 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal BED34_16465 IPR000192 Aminotransferase class V domain BED34_16465 IPR010240 Cysteine desulfurase IscS BED34_16465 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site BED34_16465 IPR016454 Cysteine desulfurase BED34_16465 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED34_16465 IPR015424 Pyridoxal phosphate-dependent transferase BED34_16465 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED34_16470 IPR030489 Transcription regulator Rrf2-type, conserved site BED34_16470 IPR000944 Transcription regulator Rrf2-type BED34_16470 IPR036390 Winged helix DNA-binding domain superfamily BED34_16470 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_16470 IPR010242 Transcription factor HTH, IscR BED34_16475 IPR004384 RNA methyltransferase TrmJ/LasT BED34_16475 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BED34_16475 IPR001537 tRNA/rRNA methyltransferase, SpoU type BED34_16475 IPR029028 Alpha/beta knot methyltransferases BED34_16480 IPR000760 Inositol monophosphatase-like BED34_16480 IPR020583 Inositol monophosphatase, metal-binding site BED34_16480 IPR033942 Inositol monophosphatase BED34_16480 IPR022337 Inositol monophosphatase, SuhB BED34_16480 IPR020550 Inositol monophosphatase, conserved site BED34_16485 IPR011541 Nickel/cobalt transporter, high-affinity BED34_16490 IPR016537 Uncharacterised conserved protein UCP008159, BED34_16490 IPR010412 Protein of unknown function DUF1007 BED34_16500 IPR036259 MFS transporter superfamily BED34_16500 IPR024989 Major facilitator superfamily associated domain BED34_16500 IPR026032 Probable 3-phenylpropionic acid transporter BED34_16505 IPR015424 Pyridoxal phosphate-dependent transferase BED34_16505 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED34_16505 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED34_16505 IPR001085 Serine hydroxymethyltransferase BED34_16505 IPR039429 Serine hydroxymethyltransferase-like domain BED34_16505 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site BED34_16510 IPR000971 Globin BED34_16510 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain BED34_16510 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase BED34_16510 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BED34_16510 IPR017927 FAD-binding domain, ferredoxin reductase-type BED34_16510 IPR017938 Riboflavin synthase-like beta-barrel BED34_16510 IPR001433 Oxidoreductase FAD/NAD(P)-binding BED34_16510 IPR009050 Globin-like superfamily BED34_16510 IPR023950 Flavohemoprotein BED34_16510 IPR012292 Globin/Protoglobin BED34_16515 IPR032791 Uncharacterised protein YhfZ, C-terminal domain BED34_16515 IPR041444 YhfZ, helix-turn-helix domain BED34_16520 IPR036634 PRD domain superfamily BED34_16520 IPR011608 PRD domain BED34_16525 IPR001608 Alanine racemase, N-terminal BED34_16525 IPR029066 PLP-binding barrel BED34_16530 IPR017947 Aryldialkylphosphatase, zinc-binding site BED34_16530 IPR001559 Phosphotriesterase BED34_16530 IPR032466 Metal-dependent hydrolase BED34_16535 IPR021238 Protein of unknown function DUF2620 BED34_16545 IPR002187 Nitrogen regulatory protein PII BED34_16545 IPR011322 Nitrogen regulatory PII-like, alpha/beta BED34_16545 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BED34_16545 IPR002332 Nitrogen regulatory protein P-II, urydylation site BED34_16545 IPR017918 Nitrogen regulatory protein PII, conserved site BED34_16550 IPR036526 Carbon-nitrogen hydrolase superfamily BED34_16550 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED34_16550 IPR000132 Nitrilase/cyanide hydratase, conserved site BED34_16550 IPR003010 Carbon-nitrogen hydrolase BED34_16550 IPR003694 NAD(+) synthetase BED34_16550 IPR022310 NAD/GMP synthase BED34_16550 IPR014445 Glutamine-dependent NAD(+) synthetase BED34_16555 IPR002078 RNA polymerase sigma factor 54 interaction domain BED34_16555 IPR025944 Sigma-54 interaction domain, conserved site BED34_16555 IPR001789 Signal transduction response regulator, receiver domain BED34_16555 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BED34_16555 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BED34_16555 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_16555 IPR009057 Homeobox-like domain superfamily BED34_16555 IPR003593 AAA+ ATPase domain BED34_16555 IPR011006 CheY-like superfamily BED34_16560 IPR025262 Quorum-sensing regulator protein G BED34_16565 IPR005467 Histidine kinase domain BED34_16565 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BED34_16565 IPR003594 Histidine kinase/HSP90-like ATPase BED34_16565 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BED34_16565 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BED34_16565 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BED34_16575 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain BED34_16575 IPR010918 PurM-like, C-terminal domain BED34_16575 IPR036676 PurM-like, C-terminal domain superfamily BED34_16575 IPR010073 Phosphoribosylformylglycinamidine synthase PurL BED34_16575 IPR017926 Glutamine amidotransferase BED34_16575 IPR040707 Phosphoribosylformylglycinamidine synthase, N-terminal BED34_16575 IPR029062 Class I glutamine amidotransferase-like BED34_16575 IPR036921 PurM-like, N-terminal domain superfamily BED34_16575 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily BED34_16580 IPR008258 Transglycosylase SLT domain 1 BED34_16580 IPR023346 Lysozyme-like domain superfamily BED34_16580 IPR000189 Prokaryotic transglycosylase, active site BED34_16580 IPR023703 Membrane-bound lytic murein transglycosylase F BED34_16580 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BED34_16585 IPR016192 APOBEC/CMP deaminase, zinc-binding BED34_16585 IPR002125 Cytidine and deoxycytidylate deaminase domain BED34_16585 IPR016193 Cytidine deaminase-like BED34_16585 IPR028883 tRNA-specific adenosine deaminase BED34_16595 IPR023214 HAD superfamily BED34_16595 IPR036412 HAD-like superfamily BED34_16595 IPR006435 HAD-superfamily hydrolase, subfamily IF, YfhB BED34_16600 IPR001347 Sugar isomerase (SIS) BED34_16600 IPR040190 N-acetylmuramic acid 6-phosphate etherase/glucokinase regulatory protein BED34_16600 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ BED34_16600 IPR009060 UBA-like superfamily BED34_16600 IPR005486 Glucokinase regulatory protein, conserved site BED34_16605 IPR035472 RpiR-like, SIS domain BED34_16605 IPR001347 Sugar isomerase (SIS) BED34_16605 IPR000281 Helix-turn-helix protein RpiR BED34_16605 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_16605 IPR009057 Homeobox-like domain superfamily BED34_16610 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BED34_16610 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BED34_16620 IPR004568 Phosphopantetheine-protein transferase domain BED34_16620 IPR037143 4'-phosphopantetheinyl transferase domain superfamily BED34_16620 IPR008278 4'-phosphopantetheinyl transferase domain BED34_16620 IPR002582 Holo-[acyl carrier protein] synthase BED34_16625 IPR036130 Pyridoxine 5'-phosphate synthase BED34_16625 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ BED34_16625 IPR013785 Aldolase-type TIM barrel BED34_16630 IPR022572 DNA replication/recombination mediator RecO, N-terminal BED34_16630 IPR012340 Nucleic acid-binding, OB-fold BED34_16630 IPR003717 Recombination protein O, RecO BED34_16630 IPR037278 ARFGAP/RecO-like zinc finger BED34_16635 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_16635 IPR009019 K homology domain superfamily, prokaryotic type BED34_16635 IPR004044 K Homology domain, type 2 BED34_16635 IPR006073 GTP binding domain BED34_16635 IPR005225 Small GTP-binding protein domain BED34_16635 IPR015946 K homology domain-like, alpha/beta BED34_16635 IPR005662 GTP-binding protein Era BED34_16635 IPR030388 Era-type guanine nucleotide-binding (G) domain BED34_16640 IPR014720 Double-stranded RNA-binding domain BED34_16640 IPR000999 Ribonuclease III domain BED34_16640 IPR036389 Ribonuclease III, endonuclease domain superfamily BED34_16640 IPR011907 Ribonuclease III BED34_16645 IPR036286 LexA/Signal peptidase-like superfamily BED34_16645 IPR000223 Peptidase S26A, signal peptidase I BED34_16645 IPR019758 Peptidase S26A, signal peptidase I, conserved site BED34_16645 IPR019533 Peptidase S26 BED34_16645 IPR019756 Peptidase S26A, signal peptidase I, serine active site BED34_16645 IPR019757 Peptidase S26A, signal peptidase I, lysine active site BED34_16650 IPR006297 Elongation factor 4 BED34_16650 IPR031157 Tr-type G domain, conserved site BED34_16650 IPR035647 EF-G domain III/V-like BED34_16650 IPR005225 Small GTP-binding protein domain BED34_16650 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_16650 IPR035654 Elongation factor 4, domain IV BED34_16650 IPR013842 GTP-binding protein LepA, C-terminal BED34_16650 IPR000640 Elongation factor EFG, domain V-like BED34_16650 IPR000795 Transcription factor, GTP-binding domain BED34_16650 IPR038363 LepA, C-terminal domain superfamily BED34_16650 IPR004161 Translation elongation factor EFTu-like, domain 2 BED34_16660 IPR007359 Positive regulator of sigma(E), RseC/MucC BED34_16660 IPR026268 Protein RseC BED34_16665 IPR033434 MucB/RseB, N-terminal BED34_16665 IPR005588 MucB/RseB BED34_16665 IPR038484 MucB/RseB, C-terminal domain superfamily BED34_16665 IPR033436 MucB/RseB, C-terminal BED34_16670 IPR005572 Anti sigma-E protein RseA, N-terminal BED34_16670 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily BED34_16670 IPR026279 Sigma-E factor negative regulatory protein RseA BED34_16670 IPR005573 Anti sigma-E protein RseA, C-terminal BED34_16675 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_16675 IPR013325 RNA polymerase sigma factor, region 2 BED34_16675 IPR007627 RNA polymerase sigma-70 region 2 BED34_16675 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 BED34_16675 IPR013324 RNA polymerase sigma factor, region 3/4-like BED34_16675 IPR039425 RNA polymerase sigma-70 like BED34_16675 IPR014284 RNA polymerase sigma-70 like domain BED34_16675 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site BED34_16675 IPR014286 RNA polymerase sigma-70 RpoE type BED34_16680 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain BED34_16680 IPR036188 FAD/NAD(P)-binding domain superfamily BED34_16680 IPR005288 L-aspartate oxidase BED34_16680 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily BED34_16680 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal BED34_16680 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily BED34_16685 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase BED34_16685 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED34_16685 IPR007848 Methyltransferase small domain BED34_16685 IPR002052 DNA methylase, N-6 adenine-specific, conserved site BED34_16690 IPR014001 Helicase superfamily 1/2, ATP-binding domain BED34_16690 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site BED34_16690 IPR014014 RNA helicase, DEAD-box type, Q motif BED34_16690 IPR028621 ATP-dependent RNA helicase SrmB BED34_16690 IPR011545 DEAD/DEAH box helicase domain BED34_16690 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_16690 IPR001650 Helicase, C-terminal BED34_16695 IPR003346 Transposase, IS116/IS110/IS902 BED34_16695 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED34_16700 IPR003346 Transposase, IS116/IS110/IS902 BED34_16700 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED34_16705 IPR020683 Ankyrin repeat-containing domain BED34_16705 IPR036770 Ankyrin repeat-containing domain superfamily BED34_16705 IPR002110 Ankyrin repeat BED34_16720 IPR001150 Glycine radical domain BED34_16720 IPR019777 Formate C-acetyltransferase glycine radical, conserved site BED34_16720 IPR011140 Autonomous glycyl radical cofactor GrcA BED34_16725 IPR036895 Uracil-DNA glycosylase-like domain superfamily BED34_16725 IPR005122 Uracil-DNA glycosylase-like BED34_16725 IPR018085 Uracil-DNA glycosylase, active site BED34_16725 IPR002043 Uracil-DNA glycosylase family 1 BED34_16730 IPR013805 GrpE nucleotide exchange factor, coiled-coil BED34_16730 IPR009012 GrpE nucleotide exchange factor, head BED34_16730 IPR000740 GrpE nucleotide exchange factor BED34_16735 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily BED34_16735 IPR002504 NAD kinase BED34_16735 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal BED34_16735 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal BED34_16740 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_16740 IPR003395 RecF/RecN/SMC, N-terminal BED34_16740 IPR004604 DNA recombination/repair protein RecN BED34_16745 IPR037873 BamE-like BED34_16745 IPR026592 Outer membrane protein assembly factor BamE BED34_16745 IPR007450 Lipoprotein SmpA/OmlA BED34_16750 IPR005346 RnfH protein BED34_16750 IPR037021 RnfH superfamily BED34_16750 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp BED34_16755 IPR023393 START-like domain superfamily BED34_16755 IPR005031 Coenzyme Q-binding protein COQ10, START domain BED34_16760 IPR023620 Small protein B BED34_16760 IPR020081 SsrA-binding protein, conserved site BED34_16760 IPR000037 SsrA-binding protein BED34_16775 IPR002645 STAS domain BED34_16775 IPR001902 SLC26A/SulP transporter BED34_16775 IPR011547 SLC26A/SulP transporter domain BED34_16775 IPR018045 Sulphate anion transporter, conserved site BED34_16775 IPR036513 STAS domain superfamily BED34_16780 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria BED34_16780 IPR006879 Carbohydrate deacetylase YdjC-like BED34_16780 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel BED34_16785 IPR020449 Transcription regulator HTH, AraC- type BED34_16785 IPR009057 Homeobox-like domain superfamily BED34_16785 IPR013096 Cupin 2, conserved barrel BED34_16785 IPR018060 DNA binding HTH domain, AraC-type BED34_16785 IPR018062 HTH domain AraC-type, conserved site BED34_16785 IPR014710 RmlC-like jelly roll fold BED34_16785 IPR011051 RmlC-like cupin domain superfamily BED34_16790 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily BED34_16790 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit BED34_16795 IPR017853 Glycoside hydrolase superfamily BED34_16795 IPR018120 Glycoside hydrolase family 1, active site BED34_16795 IPR001360 Glycoside hydrolase family 1 BED34_16800 IPR003352 Phosphotransferase system, EIIC BED34_16800 IPR004501 Phosphotransferase system, EIIC component, type 3 BED34_16800 IPR004796 Phosphotransferase system, cellobiose-type IIC component BED34_16805 IPR003501 Phosphotransferase system, EIIB component, type 2/3 BED34_16805 IPR036095 PTS system IIB component-like superfamily BED34_16805 IPR013012 Phosphotransferase system, EIIB component, type 3 BED34_16815 IPR003346 Transposase, IS116/IS110/IS902 BED34_16815 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED34_16820 IPR023210 NADP-dependent oxidoreductase domain BED34_16820 IPR036812 NADP-dependent oxidoreductase domain superfamily BED34_16825 IPR003691 Putative fluoride ion transporter CrcB BED34_16830 IPR003691 Putative fluoride ion transporter CrcB BED34_16835 IPR003148 Regulator of K+ conductance, N-terminal BED34_16835 IPR013099 Potassium channel domain BED34_16835 IPR036291 NAD(P)-binding domain superfamily BED34_16840 IPR038303 HNS-dependent expression A/B superfamily BED34_16840 IPR028623 HNS-dependent expression B BED34_16840 IPR010486 HNS-dependent expression A/B BED34_16845 IPR011541 Nickel/cobalt transporter, high-affinity BED34_16845 IPR004688 Transition metal uptake transporter nickel/cobalt BED34_16850 IPR029020 Ammonium/urea transporter BED34_16850 IPR004937 Urea transporter BED34_16855 IPR002669 Urease accessory protein UreD BED34_16860 IPR004400 Urease accessory protein UreG BED34_16860 IPR003495 CobW/HypB/UreG, nucleotide-binding domain BED34_16860 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_16865 IPR038277 UreF domain superfamily BED34_16865 IPR002639 Urease accessory protein UreF BED34_16870 IPR007864 Urease accessory protein UreE, C-terminal domain BED34_16870 IPR004029 UreE urease accessory, N-terminal BED34_16870 IPR012406 Urease accessory protein UreE BED34_16870 IPR036118 UreE urease accessory, N-terminal domain superfamily BED34_16875 IPR029754 Urease nickel binding site BED34_16875 IPR032466 Metal-dependent hydrolase BED34_16875 IPR011059 Metal-dependent hydrolase, composite domain superfamily BED34_16875 IPR017951 Urease alpha subunit, C-terminal BED34_16875 IPR005848 Urease, alpha subunit BED34_16875 IPR006680 Amidohydrolase-related BED34_16875 IPR017950 Urease active site BED34_16875 IPR011612 Urease alpha-subunit, N-terminal domain BED34_16880 IPR036461 Urease, beta subunit superfamily BED34_16880 IPR002019 Urease, beta subunit BED34_16885 IPR002026 Urease, gamma/gamma-beta subunit BED34_16885 IPR012010 Urease, gamma subunit BED34_16885 IPR036463 Urease, gamma subunit superfamily BED34_16890 IPR014137 Nickel import ATP-binding protein NikE BED34_16890 IPR015858 ABC transporter, nickel import, NikE BED34_16890 IPR003593 AAA+ ATPase domain BED34_16890 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_16890 IPR003439 ABC transporter-like BED34_16890 IPR017871 ABC transporter, conserved site BED34_16895 IPR017871 ABC transporter, conserved site BED34_16895 IPR003593 AAA+ ATPase domain BED34_16895 IPR014138 Nickel import ATP-binding protein NikD BED34_16895 IPR015857 ABC transporter, nickel import, NikD BED34_16895 IPR003439 ABC transporter-like BED34_16895 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_16900 IPR035906 MetI-like superfamily BED34_16900 IPR025966 Oligopeptide transport permease C-like, N-terminal domain BED34_16900 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED34_16905 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED34_16905 IPR035906 MetI-like superfamily BED34_16910 IPR023765 Solute-binding protein family 5, conserved site BED34_16910 IPR039424 Solute-binding protein family 5 BED34_16910 IPR000914 Solute-binding protein family 5 domain BED34_16910 IPR030678 Peptide/nickel binding protein, MppA-type BED34_16940 IPR012340 Nucleic acid-binding, OB-fold BED34_16940 IPR012156 Cold shock, CspA BED34_16940 IPR011129 Cold shock domain BED34_16940 IPR019844 Cold-shock (CSD) domain BED34_16940 IPR002059 Cold-shock protein, DNA-binding BED34_16955 IPR018994 Protein of unknown function DUF2002 BED34_16960 IPR036259 MFS transporter superfamily BED34_16960 IPR023008 Uncharacterized MFS-type transporter YhhS-like BED34_16960 IPR020846 Major facilitator superfamily domain BED34_16960 IPR011701 Major facilitator superfamily BED34_16965 IPR018062 HTH domain AraC-type, conserved site BED34_16965 IPR009057 Homeobox-like domain superfamily BED34_16965 IPR018060 DNA binding HTH domain, AraC-type BED34_16975 IPR009435 Acid shock BED34_16975 IPR023497 Acid shock protein BED34_16980 IPR010279 Inner membrane protein YqjD/ElaB BED34_16985 IPR015424 Pyridoxal phosphate-dependent transferase BED34_16985 IPR004839 Aminotransferase, class I/classII BED34_16985 IPR000524 Transcription regulator HTH, GntR BED34_16985 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_16985 IPR036390 Winged helix DNA-binding domain superfamily BED34_16985 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED34_16990 IPR029032 AhpD-like BED34_16990 IPR004675 Alkylhydroperoxidase AhpD core BED34_16990 IPR003779 Carboxymuconolactone decarboxylase-like BED34_17000 IPR029039 Flavoprotein-like superfamily BED34_17000 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial BED34_17000 IPR004465 Ribonucleotide reductase Class Ib, NrdI BED34_17005 IPR013509 Ribonucleotide reductase large subunit, N-terminal BED34_17005 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE BED34_17005 IPR000788 Ribonucleotide reductase large subunit, C-terminal BED34_17005 IPR039718 Ribonucleoside-diphosphate reductase large subunit BED34_17005 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal BED34_17005 IPR013554 Ribonucleotide reductase N-terminal BED34_17005 IPR013346 Ribonucleotide reductase, class I , alpha subunit BED34_17010 IPR026494 Ribonucleoside reductase subunit beta, NrdF BED34_17010 IPR000358 Ribonucleotide reductase small subunit family BED34_17010 IPR009078 Ferritin-like superfamily BED34_17010 IPR012348 Ribonucleotide reductase-like BED34_17010 IPR030475 Ribonucleotide reductase small subunit, acitve site BED34_17010 IPR033909 Ribonucleotide reductase small subunit BED34_17015 IPR003593 AAA+ ATPase domain BED34_17015 IPR017871 ABC transporter, conserved site BED34_17015 IPR000644 CBS domain BED34_17015 IPR005892 Glycine betaine transport ATP-binding subunit BED34_17015 IPR003439 ABC transporter-like BED34_17015 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_17020 IPR035906 MetI-like superfamily BED34_17020 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED34_17025 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain BED34_17035 IPR006309 DNA polymerase 3, epsilon subunit BED34_17035 IPR013520 Exonuclease, RNase T/DNA polymerase III BED34_17035 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain BED34_17035 IPR012337 Ribonuclease H-like superfamily BED34_17035 IPR036397 Ribonuclease H superfamily BED34_17040 IPR036397 Ribonuclease H superfamily BED34_17040 IPR022892 Ribonuclease HI BED34_17040 IPR012337 Ribonuclease H-like superfamily BED34_17040 IPR002156 Ribonuclease H domain BED34_17045 IPR013216 Methyltransferase type 11 BED34_17045 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED34_17045 IPR026669 Arsenite methyltransferase-like BED34_17050 IPR017782 Hydroxyacylglutathione hydrolase BED34_17050 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain BED34_17050 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain BED34_17050 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BED34_17050 IPR001279 Metallo-beta-lactamase BED34_17055 IPR008258 Transglycosylase SLT domain 1 BED34_17055 IPR000189 Prokaryotic transglycosylase, active site BED34_17055 IPR023346 Lysozyme-like domain superfamily BED34_17055 IPR036779 LysM domain superfamily BED34_17055 IPR018392 LysM domain BED34_17060 IPR003346 Transposase, IS116/IS110/IS902 BED34_17060 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED34_17065 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BED34_17065 IPR005135 Endonuclease/exonuclease/phosphatase BED34_17065 IPR022958 Uncharacterised protein family UPF0294 BED34_17070 IPR011701 Major facilitator superfamily BED34_17070 IPR020846 Major facilitator superfamily domain BED34_17070 IPR036259 MFS transporter superfamily BED34_17075 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_17075 IPR005119 LysR, substrate-binding BED34_17075 IPR036390 Winged helix DNA-binding domain superfamily BED34_17075 IPR000847 Transcription regulator HTH, LysR BED34_17080 IPR018170 Aldo/keto reductase, conserved site BED34_17080 IPR020471 Aldo/keto reductase BED34_17080 IPR023210 NADP-dependent oxidoreductase domain BED34_17080 IPR036812 NADP-dependent oxidoreductase domain superfamily BED34_17090 IPR001207 Transposase, mutator type BED34_17130 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_17130 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain BED34_17130 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal BED34_17130 IPR018449 NIL domain BED34_17130 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria BED34_17130 IPR003439 ABC transporter-like BED34_17130 IPR017871 ABC transporter, conserved site BED34_17130 IPR003593 AAA+ ATPase domain BED34_17130 IPR026253 Methionine import ATP-binding protein MetN BED34_17135 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED34_17135 IPR035906 MetI-like superfamily BED34_17140 IPR004872 Lipoprotein NlpA family BED34_17145 IPR030852 Outer membrane lipoprotein RcsF BED34_17150 IPR041369 TrmO, C-terminal BED34_17150 IPR023368 Uncharacterised protein family UPF0066, conserved site BED34_17150 IPR023370 TrmO-like, N-terminal domain BED34_17150 IPR036414 YaeB, N-terminal domain superfamily BED34_17150 IPR036413 YaeB-like superfamily BED34_17150 IPR040372 YaeB-like BED34_17155 IPR033730 Prokaryote proline-tRNA ligase core domain BED34_17155 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily BED34_17155 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) BED34_17155 IPR006195 Aminoacyl-tRNA synthetase, class II BED34_17155 IPR004154 Anticodon-binding BED34_17155 IPR036621 Anticodon-binding domain superfamily BED34_17155 IPR002316 Proline-tRNA ligase, class IIa BED34_17155 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain BED34_17155 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 BED34_17155 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type BED34_17160 IPR038139 NlpE, C-terminal domain superfamily BED34_17160 IPR007298 Copper resistance lipoprotein NlpE BED34_17160 IPR033450 NlpE, C-terminal OB domain BED34_17165 IPR000352 Peptide chain release factor class I BED34_17170 IPR038590 YaeQ superfamily BED34_17170 IPR009822 YaeQ BED34_17170 IPR011335 Restriction endonuclease type II-like BED34_17180 IPR023534 Rof/RNase P-like BED34_17180 IPR038626 Rof-like superfamily BED34_17180 IPR009778 Modulator of Rho-dependent transcription termination BED34_17185 IPR009056 Cytochrome c-like domain BED34_17185 IPR036909 Cytochrome c-like domain superfamily BED34_17190 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain BED34_17190 IPR012094 tRNA(Ile)-lysidine synthase BED34_17190 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal BED34_17190 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal BED34_17190 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED34_17190 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal BED34_17195 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BED34_17195 IPR037478 YwkD-like domain BED34_17195 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BED34_17195 IPR037523 Vicinal oxygen chelate (VOC) domain BED34_17205 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal BED34_17205 IPR029045 ClpP/crotonase-like domain superfamily BED34_17205 IPR001095 Acetyl-CoA carboxylase, alpha subunit BED34_17210 IPR016195 Polymerase/histidinol phosphatase-like BED34_17210 IPR003141 Polymerase/histidinol phosphatase, N-terminal BED34_17210 IPR004013 PHP domain BED34_17210 IPR004805 DNA polymerase III, alpha subunit BED34_17210 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type BED34_17210 IPR029460 DNA polymerase, helix-hairpin-helix motif BED34_17210 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain BED34_17210 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain BED34_17210 IPR040982 DNA polymerase III alpha subunit finger domain BED34_17215 IPR024567 Ribonuclease HII/HIII domain BED34_17215 IPR001352 Ribonuclease HII/HIII BED34_17215 IPR022898 Ribonuclease HII BED34_17215 IPR036397 Ribonuclease H superfamily BED34_17215 IPR012337 Ribonuclease H-like superfamily BED34_17220 IPR003835 Glycosyl transferase, family 19 BED34_17230 IPR029069 HotDog domain superfamily BED34_17230 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ BED34_17230 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ BED34_17235 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD BED34_17235 IPR018357 Hexapeptide transferase, conserved site BED34_17235 IPR001451 Hexapeptide repeat BED34_17235 IPR011004 Trimeric LpxA-like superfamily BED34_17235 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region BED34_17240 IPR024930 Skp domain superfamily BED34_17240 IPR005632 Chaperone protein Skp BED34_17245 IPR010827 POTRA domain, BamA/TamA-like BED34_17245 IPR039910 Surface antigen D15-like BED34_17245 IPR023707 Outer membrane protein assembly factor BamA BED34_17245 IPR034746 POTRA domain BED34_17245 IPR000184 Bacterial surface antigen (D15) BED34_17250 IPR041489 PDZ domain 6 BED34_17250 IPR036034 PDZ superfamily BED34_17250 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase BED34_17250 IPR001478 PDZ domain BED34_17250 IPR008915 Peptidase M50 BED34_17255 IPR000374 Phosphatidate cytidylyltransferase BED34_17260 IPR036424 Decaprenyl diphosphate synthase-like superfamily BED34_17260 IPR001441 Decaprenyl diphosphate synthase-like BED34_17260 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site BED34_17265 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal BED34_17265 IPR036169 DXP reductoisomerase, C-terminal domain superfamily BED34_17265 IPR036291 NAD(P)-binding domain superfamily BED34_17265 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase BED34_17265 IPR026877 DXP reductoisomerase C-terminal domain BED34_17265 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal BED34_17270 IPR036191 RRF superfamily BED34_17270 IPR023584 Ribosome recycling factor domain BED34_17270 IPR002661 Ribosome recycling factor BED34_17275 IPR015963 Uridylate kinase, bacteria BED34_17275 IPR011817 Uridylate kinase BED34_17275 IPR001048 Aspartate/glutamate/uridylate kinase BED34_17275 IPR036393 Acetylglutamate kinase-like superfamily BED34_17280 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation BED34_17280 IPR018101 Translation elongation factor Ts, conserved site BED34_17280 IPR009060 UBA-like superfamily BED34_17280 IPR001816 Translation elongation factor EFTs/EF1B BED34_17280 IPR036402 Elongation factor Ts, dimerisation domain superfamily BED34_17285 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid BED34_17285 IPR018130 Ribosomal protein S2, conserved site BED34_17285 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily BED34_17285 IPR001865 Ribosomal protein S2 BED34_17295 IPR003607 HD/PDEase domain BED34_17295 IPR006674 HD domain BED34_17295 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase BED34_17295 IPR002934 Polymerase, nucleotidyl transferase domain BED34_17295 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme BED34_17295 IPR002912 ACT domain BED34_17300 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily BED34_17300 IPR018357 Hexapeptide transferase, conserved site BED34_17300 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family BED34_17300 IPR011004 Trimeric LpxA-like superfamily BED34_17300 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 BED34_17300 IPR001451 Hexapeptide repeat BED34_17305 IPR020911 Uncharacterised protein family UPF0325 BED34_17310 IPR029039 Flavoprotein-like superfamily BED34_17310 IPR001094 Flavodoxin-like BED34_17310 IPR008254 Flavodoxin/nitric oxide synthase BED34_17315 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site BED34_17315 IPR020103 Pseudouridine synthase, catalytic domain superfamily BED34_17315 IPR006145 Pseudouridine synthase, RsuA/RluA BED34_17320 IPR036814 YqcC-like superfamily BED34_17320 IPR023376 YqcC-like domain BED34_17320 IPR007384 Protein of unknown function UCP006257 BED34_17325 IPR038228 Syd superfamily BED34_17325 IPR009948 Syd BED34_17330 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 BED34_17330 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF BED34_17330 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal BED34_17335 IPR031100 LOG family BED34_17335 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal BED34_17335 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily BED34_17335 IPR021826 Domain of unknown function DUF3412 BED34_17340 IPR002421 5'-3' exonuclease, N-terminal BED34_17340 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal BED34_17340 IPR038969 Flap endonuclease BED34_17340 IPR020045 DNA polymerase I-like, H3TH domain BED34_17340 IPR036279 5'-3' exonuclease, C-terminal domain superfamily BED34_17340 IPR022895 Flap endonuclease Xni BED34_17340 IPR008918 Helix-hairpin-helix motif, class 2 BED34_17340 IPR029060 PIN-like domain superfamily BED34_17345 IPR003346 Transposase, IS116/IS110/IS902 BED34_17345 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED34_17350 IPR002877 Ribosomal RNA methyltransferase FtsJ domain BED34_17350 IPR011224 Ribosomal RNA large subunit methyltransferase M BED34_17350 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED34_17350 IPR040739 RlmM ferredoxin-like domain BED34_17355 IPR006696 Protein of unknown function DUF423 BED34_17360 IPR000847 Transcription regulator HTH, LysR BED34_17360 IPR005119 LysR, substrate-binding BED34_17360 IPR036390 Winged helix DNA-binding domain superfamily BED34_17360 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_17365 IPR010920 LSM domain superfamily BED34_17365 IPR010305 Protein of unknown function DUF903 BED34_17370 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA BED34_17370 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site BED34_17370 IPR000192 Aminotransferase class V domain BED34_17370 IPR015424 Pyridoxal phosphate-dependent transferase BED34_17370 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED34_17370 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED34_17375 IPR003808 Fe-S metabolism associated domain, SufE-like BED34_17375 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE BED34_17380 IPR035985 Ubiquitin-activating enzyme BED34_17380 IPR000594 THIF-type NAD/FAD binding fold BED34_17385 IPR034654 MltA, 3D domain BED34_17385 IPR010611 3D domain BED34_17385 IPR026044 Membrane-bound lytic murein transglycosylase A BED34_17385 IPR005300 Lytic transglycosylase MltA, domain B BED34_17385 IPR036908 RlpA-like domain superfamily BED34_17405 IPR021731 AMIN domain BED34_17405 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain BED34_17405 IPR006311 Twin-arginine translocation pathway, signal sequence BED34_17410 IPR036393 Acetylglutamate kinase-like superfamily BED34_17410 IPR016181 Acyl-CoA N-acyltransferase BED34_17410 IPR001048 Aspartate/glutamate/uridylate kinase BED34_17410 IPR000182 GNAT domain BED34_17410 IPR033719 N-acetylglutamate synthase, kinase-like domain BED34_17410 IPR010167 Amino-acid N-acetyltransferase BED34_17415 IPR006344 RecBCD enzyme subunit RecD BED34_17415 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_17415 IPR041851 RecBCD enzyme subunit RecD, N-terminal domain BED34_17415 IPR027785 UvrD-like helicase C-terminal domain BED34_17415 IPR003593 AAA+ ATPase domain BED34_17420 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_17420 IPR004586 RecBCD enzyme subunit RecB BED34_17420 IPR034739 UvrD/AddA helicase, N-terminal BED34_17420 IPR014017 UvrD-like DNA helicase, C-terminal BED34_17420 IPR000212 DNA helicase, UvrD/REP type BED34_17420 IPR011604 Exonuclease, phage-type/RecB, C-terminal BED34_17420 IPR011335 Restriction endonuclease type II-like BED34_17420 IPR014016 UvrD-like helicase, ATP-binding domain BED34_17420 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type BED34_17425 IPR011765 Peptidase M16, N-terminal BED34_17425 IPR032632 Peptidase M16, middle/third domain BED34_17425 IPR001431 Peptidase M16, zinc-binding site BED34_17425 IPR007863 Peptidase M16, C-terminal BED34_17425 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like BED34_17430 IPR013986 DExx box DNA helicase domain superfamily BED34_17430 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_17430 IPR006697 RecBCD enzyme subunit RecC BED34_17430 IPR011335 Restriction endonuclease type II-like BED34_17430 IPR041500 RecC, C-terminal BED34_17435 IPR022204 Prepilin peptidase dependent protein C BED34_17435 IPR012902 Prokaryotic N-terminal methylation site BED34_17455 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily BED34_17455 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain BED34_17455 IPR020940 Thymidylate synthase, active site BED34_17455 IPR000398 Thymidylate synthase BED34_17460 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt BED34_17465 IPR008279 PEP-utilising enzyme, mobile domain BED34_17465 IPR000121 PEP-utilising enzyme, C-terminal BED34_17465 IPR023151 PEP-utilising enzyme, conserved site BED34_17465 IPR036637 Phosphohistidine domain superfamily BED34_17465 IPR006318 Phosphotransferase system, enzyme I-like BED34_17465 IPR029016 GAF-like domain superfamily BED34_17465 IPR018274 PEP-utilising enzyme, active site BED34_17465 IPR003018 GAF domain BED34_17465 IPR040442 Pyruvate kinase-like domain superfamily BED34_17465 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily BED34_17465 IPR036618 PtsI, HPr-binding domain superfamily BED34_17465 IPR008731 Phosphotransferase system, enzyme I N-terminal BED34_17480 IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II superfamily BED34_17480 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II BED34_17480 IPR004230 DNA mismatch repair protein MutH BED34_17480 IPR011335 Restriction endonuclease type II-like BED34_17485 IPR005496 Integral membrane protein TerC BED34_17490 IPR036812 NADP-dependent oxidoreductase domain superfamily BED34_17490 IPR023210 NADP-dependent oxidoreductase domain BED34_17490 IPR020471 Aldo/keto reductase BED34_17500 IPR000873 AMP-dependent synthetase/ligase BED34_17500 IPR020845 AMP-binding, conserved site BED34_17500 IPR025110 AMP-binding enzyme, C-terminal domain BED34_17500 IPR023775 Bifunctional protein Aas BED34_17500 IPR042099 AMP-dependent synthetase-like superfamily BED34_17500 IPR002123 Phospholipid/glycerol acyltransferase BED34_17505 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase BED34_17505 IPR006656 Molybdopterin oxidoreductase BED34_17505 IPR006657 Molybdopterin dinucleotide-binding domain BED34_17505 IPR009010 Aspartate decarboxylase-like domain superfamily BED34_17505 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site BED34_17510 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BED34_17510 IPR000843 LacI-type HTH domain BED34_17510 IPR028082 Periplasmic binding protein-like I BED34_17515 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal BED34_17515 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site BED34_17515 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal BED34_17515 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site BED34_17515 IPR000183 Ornithine/DAP/Arg decarboxylase BED34_17515 IPR029066 PLP-binding barrel BED34_17515 IPR002986 Diaminopimelate decarboxylase, LysA BED34_17515 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal BED34_17520 IPR036390 Winged helix DNA-binding domain superfamily BED34_17520 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_17520 IPR000847 Transcription regulator HTH, LysR BED34_17520 IPR005119 LysR, substrate-binding BED34_17520 IPR037414 Transcriptional activator protein LysR, PBP2 domain BED34_17595 IPR010054 General secretion pathway protein G BED34_17595 IPR000983 Bacterial general secretion pathway protein G-type pilin BED34_17595 IPR012902 Prokaryotic N-terminal methylation site BED34_17595 IPR013545 Type II secretion system protein G BED34_17610 IPR013356 Type II secretion system GspD BED34_17610 IPR004846 Type II/III secretion system BED34_17610 IPR004845 Type II secretion system GspD, conserved site BED34_17610 IPR038591 NolW-like superfamily BED34_17610 IPR005644 NolW-like BED34_17610 IPR001775 GspD/PilQ family BED34_17625 IPR001765 Carbonic anhydrase BED34_17625 IPR036874 Carbonic anhydrase superfamily BED34_17625 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site BED34_17630 IPR011991 ArsR-like helix-turn-helix domain BED34_17630 IPR036390 Winged helix DNA-binding domain superfamily BED34_17630 IPR002577 Helix-turn-helix, HxlR type BED34_17630 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_17635 IPR036291 NAD(P)-binding domain superfamily BED34_17635 IPR002347 Short-chain dehydrogenase/reductase SDR BED34_17640 IPR022835 Chaperone modulatory protein CbpM BED34_17645 IPR002939 Chaperone DnaJ, C-terminal BED34_17645 IPR018253 DnaJ domain, conserved site BED34_17645 IPR008971 HSP40/DnaJ peptide-binding BED34_17645 IPR036869 Chaperone J-domain superfamily BED34_17645 IPR023859 DNA-binding protein, curved-DNA BED34_17645 IPR001623 DnaJ domain BED34_17650 IPR003346 Transposase, IS116/IS110/IS902 BED34_17650 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED34_17655 IPR000700 PAS-associated, C-terminal BED34_17655 IPR035965 PAS domain superfamily BED34_17655 IPR013656 PAS fold-4 BED34_17655 IPR000014 PAS domain BED34_17655 IPR029787 Nucleotide cyclase BED34_17655 IPR000160 GGDEF domain BED34_17660 IPR032710 NTF2-like domain superfamily BED34_17660 IPR037401 SnoaL-like domain BED34_17675 IPR001207 Transposase, mutator type BED34_17680 IPR001387 Cro/C1-type helix-turn-helix domain BED34_17680 IPR022452 Antitoxin MqsA BED34_17680 IPR032758 Antitoxin MqsA/HigA-2 BED34_17680 IPR022453 Zinc finger, MqsA-type BED34_17680 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BED34_17685 IPR031451 mRNA interferase toxin MqsR BED34_17685 IPR038493 Toxin MqsR superfamily BED34_17700 IPR009057 Homeobox-like domain superfamily BED34_17700 IPR038717 Tc1-like transposase, DDE domain BED34_17700 IPR025959 Winged helix-turn helix domain BED34_17700 IPR012337 Ribonuclease H-like superfamily BED34_17705 IPR002104 Integrase, catalytic domain BED34_17705 IPR011010 DNA breaking-rejoining enzyme, catalytic core BED34_17705 IPR013762 Integrase-like, catalytic domain superfamily BED34_17705 IPR010998 Integrase/recombinase, N-terminal BED34_17745 IPR012337 Ribonuclease H-like superfamily BED34_17745 IPR009057 Homeobox-like domain superfamily BED34_17745 IPR025959 Winged helix-turn helix domain BED34_17745 IPR038717 Tc1-like transposase, DDE domain BED34_17780 IPR002104 Integrase, catalytic domain BED34_17780 IPR011010 DNA breaking-rejoining enzyme, catalytic core BED34_17780 IPR013762 Integrase-like, catalytic domain superfamily BED34_17790 IPR012340 Nucleic acid-binding, OB-fold BED34_17790 IPR006195 Aminoacyl-tRNA synthetase, class II BED34_17790 IPR002313 Lysine-tRNA ligase, class II BED34_17790 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal BED34_17790 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) BED34_17790 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type BED34_17790 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II BED34_17795 IPR005139 Peptide chain release factor BED34_17795 IPR000352 Peptide chain release factor class I BED34_17795 IPR004374 Peptide chain release factor 2 BED34_17800 IPR003156 DHHA1 domain BED34_17800 IPR038763 DHH phosphoesterase superfamily BED34_17800 IPR001667 DDH domain BED34_17800 IPR041122 RecJ, OB domain BED34_17800 IPR004610 Bacterial RecJ exonuclease BED34_17805 IPR033954 Disulphide bond isomerase, DsbC/G BED34_17805 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal BED34_17805 IPR013766 Thioredoxin domain BED34_17805 IPR017937 Thioredoxin, conserved site BED34_17805 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily BED34_17805 IPR036249 Thioredoxin-like superfamily BED34_17805 IPR012336 Thioredoxin-like fold BED34_17810 IPR011010 DNA breaking-rejoining enzyme, catalytic core BED34_17810 IPR013762 Integrase-like, catalytic domain superfamily BED34_17810 IPR004107 Integrase, SAM-like, N-terminal BED34_17810 IPR002104 Integrase, catalytic domain BED34_17810 IPR010998 Integrase/recombinase, N-terminal BED34_17810 IPR023009 Tyrosine recombinase XerC/XerD BED34_17810 IPR011932 Tyrosine recombinase XerD BED34_17815 IPR008254 Flavodoxin/nitric oxide synthase BED34_17815 IPR001226 Flavodoxin, conserved site BED34_17815 IPR029039 Flavoprotein-like superfamily BED34_17815 IPR010086 Flavodoxin, long chain BED34_17820 IPR010364 Uncharacterised protein family, inner membrane CreD BED34_17825 IPR029151 Periplasmic sensor-like domain superfamily BED34_17825 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BED34_17825 IPR003660 HAMP domain BED34_17825 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BED34_17825 IPR005467 Histidine kinase domain BED34_17825 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BED34_17825 IPR003594 Histidine kinase/HSP90-like ATPase BED34_17825 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BED34_17830 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_17830 IPR001867 OmpR/PhoB-type DNA-binding domain BED34_17830 IPR011006 CheY-like superfamily BED34_17830 IPR016032 Signal transduction response regulator, C-terminal effector BED34_17830 IPR001789 Signal transduction response regulator, receiver domain BED34_17830 IPR039420 Transcriptional regulatory protein WalR-like BED34_17835 IPR009883 Inner membrane protein YgfX BED34_17840 IPR005631 Flavinator of succinate dehydrogenase BED34_17840 IPR036714 Flavinator of succinate dehydrogenase superfamily BED34_17845 IPR006222 Aminomethyltransferase, folate-binding domain BED34_17845 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal BED34_17845 IPR023758 tRNA-modifying protein YgfZ BED34_17845 IPR017703 YgfZ/GcvT conserved site BED34_17850 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED34_17850 IPR003346 Transposase, IS116/IS110/IS902 BED34_17855 IPR004254 AdipoR/Haemolysin-III-related BED34_17855 IPR005744 Hly-III BED34_17865 IPR020904 Short-chain dehydrogenase/reductase, conserved site BED34_17865 IPR036291 NAD(P)-binding domain superfamily BED34_17865 IPR002347 Short-chain dehydrogenase/reductase SDR BED34_17875 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED34_17875 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED34_17875 IPR015424 Pyridoxal phosphate-dependent transferase BED34_17875 IPR020581 Glycine cleavage system P protein BED34_17875 IPR003437 Glycine dehydrogenase (decarboxylating) BED34_17880 IPR000089 Biotin/lipoyl attachment BED34_17880 IPR002930 Glycine cleavage system H-protein BED34_17880 IPR033753 Glycine cleavage system H-protein/Simiate BED34_17880 IPR017453 Glycine cleavage system H-protein, subgroup BED34_17880 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site BED34_17880 IPR011053 Single hybrid motif BED34_17885 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal BED34_17885 IPR022903 Glycine cleavage system T protein, bacteria BED34_17885 IPR006223 Glycine cleavage system T protein BED34_17885 IPR006222 Aminomethyltransferase, folate-binding domain BED34_17885 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain BED34_17885 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 BED34_17885 IPR028896 Aminomethyltransferase-like BED34_17890 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 BED34_17890 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site BED34_17890 IPR002938 FAD-binding domain BED34_17890 IPR036188 FAD/NAD(P)-binding domain superfamily BED34_17895 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site BED34_17895 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase BED34_17895 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 BED34_17895 IPR036188 FAD/NAD(P)-binding domain superfamily BED34_17895 IPR002938 FAD-binding domain BED34_17900 IPR007865 Aminopeptidase P, N-terminal BED34_17900 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal BED34_17900 IPR036005 Creatinase/aminopeptidase-like BED34_17900 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site BED34_17900 IPR000994 Peptidase M24 BED34_17900 IPR001714 Peptidase M24, methionine aminopeptidase BED34_17905 IPR011978 Uncharacterised protein family UPF0149 BED34_17905 IPR036255 YgfB-like superfamily BED34_17910 IPR007838 Cell division protein ZapA-like BED34_17910 IPR036192 Cell division protein ZapA-like superfamily BED34_17910 IPR023771 Cell division protein ZapA, eubacteria BED34_17920 IPR037171 NagB/RpiA transferase-like BED34_17920 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily BED34_17920 IPR002698 5-formyltetrahydrofolate cyclo-ligase BED34_17925 IPR020810 Enolase, C-terminal TIM barrel domain BED34_17925 IPR029017 Enolase-like, N-terminal BED34_17925 IPR020811 Enolase, N-terminal BED34_17925 IPR036849 Enolase-like, C-terminal domain superfamily BED34_17925 IPR000941 Enolase BED34_17925 IPR020809 Enolase, conserved site BED34_17930 IPR033828 CTP synthase GATase domain BED34_17930 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_17930 IPR004468 CTP synthase BED34_17930 IPR017456 CTP synthase, N-terminal BED34_17930 IPR029062 Class I glutamine amidotransferase-like BED34_17930 IPR017926 Glutamine amidotransferase BED34_17935 IPR011551 NTP pyrophosphohydrolase MazG BED34_17935 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core BED34_17940 IPR002912 ACT domain BED34_17940 IPR012675 Beta-grasp domain superfamily BED34_17940 IPR004811 RelA/SpoT family BED34_17940 IPR007685 RelA/SpoT BED34_17940 IPR004095 TGS BED34_17940 IPR012676 TGS-like BED34_17940 IPR033655 RelA, TGS domain BED34_17940 IPR003607 HD/PDEase domain BED34_17945 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD BED34_17945 IPR030390 RNA methyltransferase TrmA, active site BED34_17945 IPR030391 RNA methyltransferase TrmA, conserved site BED34_17945 IPR012340 Nucleic acid-binding, OB-fold BED34_17945 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED34_17945 IPR002792 TRAM domain BED34_17945 IPR010280 (Uracil-5)-methyltransferase family BED34_17950 IPR003660 HAMP domain BED34_17950 IPR011006 CheY-like superfamily BED34_17950 IPR003594 Histidine kinase/HSP90-like ATPase BED34_17950 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BED34_17950 IPR005467 Histidine kinase domain BED34_17950 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BED34_17950 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BED34_17950 IPR019247 Histidine kinase BarA, N-terminal BED34_17950 IPR036641 HPT domain superfamily BED34_17950 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain BED34_17950 IPR001789 Signal transduction response regulator, receiver domain BED34_17950 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BED34_17955 IPR001940 Peptidase S1C BED34_17955 IPR009003 Peptidase S1, PA clan BED34_17955 IPR036034 PDZ superfamily BED34_17955 IPR001478 PDZ domain BED34_17955 IPR011782 Peptidase S1C, Do BED34_17960 IPR026875 Phosphohydrolase-associated domain BED34_17960 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain superfamily BED34_17960 IPR006261 dNTP triphosphohydrolase BED34_17960 IPR020779 dNTP triphosphohydrolase, type 1 BED34_17960 IPR003607 HD/PDEase domain BED34_17960 IPR006674 HD domain BED34_17965 IPR000845 Nucleoside phosphorylase domain BED34_17965 IPR010049 MTA/SAH nucleosidase BED34_17965 IPR035994 Nucleoside phosphorylase superfamily BED34_17970 IPR002491 ABC transporter periplasmic binding domain BED34_17970 IPR023544 ABC transporter, vitamin B12-binding protein BED34_17975 IPR005115 Uncharacterised domain UPF0126 BED34_17980 IPR016092 FeS cluster insertion protein BED34_17980 IPR017870 FeS cluster insertion, C-terminal, conserved site BED34_17980 IPR023063 FeS cluster insertion protein ErpA BED34_17980 IPR035903 HesB-like domain superfamily BED34_17980 IPR000361 FeS cluster biogenesis BED34_17985 IPR023861 Chloride channel, ClcA BED34_17985 IPR014743 Chloride channel, core BED34_17985 IPR001807 Chloride channel, voltage gated BED34_17990 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED34_17990 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED34_17990 IPR015424 Pyridoxal phosphate-dependent transferase BED34_17990 IPR005814 Aminotransferase class-III BED34_17990 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase BED34_17995 IPR004737 Nitrate transporter BED34_17995 IPR011701 Major facilitator superfamily BED34_17995 IPR036259 MFS transporter superfamily BED34_18000 IPR037294 ABC transporter, BtuC-like BED34_18000 IPR000522 ABC transporter, permease protein, BtuC-like BED34_18005 IPR002491 ABC transporter periplasmic binding domain BED34_18010 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_18010 IPR017871 ABC transporter, conserved site BED34_18010 IPR003439 ABC transporter-like BED34_18010 IPR003593 AAA+ ATPase domain BED34_18015 IPR028166 Bifunctional transglycosylase second domain BED34_18015 IPR001460 Penicillin-binding protein, transpeptidase BED34_18015 IPR036950 Penicillin binding protein transglycosylase domain BED34_18015 IPR011813 Penicillin-binding protein 1B BED34_18015 IPR032730 Transglycosylase PBP1b, N-terminal transmembrane domain BED34_18015 IPR001264 Glycosyl transferase, family 51 BED34_18015 IPR012338 Beta-lactamase/transpeptidase-like BED34_18015 IPR023346 Lysozyme-like domain superfamily BED34_18020 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_18020 IPR011545 DEAD/DEAH box helicase domain BED34_18020 IPR007502 Helicase-associated domain BED34_18020 IPR014001 Helicase superfamily 1/2, ATP-binding domain BED34_18020 IPR001650 Helicase, C-terminal BED34_18020 IPR010225 ATP-dependent helicase HrpB BED34_18020 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal BED34_18025 IPR004175 RNA 2',3'-cyclic phosphodiesterase BED34_18025 IPR014051 Phosphoesterase, HXTX BED34_18025 IPR009097 Cyclic phosphodiesterase BED34_18030 IPR005224 Sugar fermentation stimulation protein BED34_18030 IPR040452 Sugar fermentation stimulation protein, C-terminal BED34_18030 IPR041465 SfsA, N-terminal OB domain BED34_18035 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria BED34_18035 IPR020458 Zinc finger, DksA/TraR C4-type conserved site BED34_18035 IPR000962 Zinc finger, DksA/TraR C4-type BED34_18035 IPR037187 DksA, N-terminal domain superfamily BED34_18035 IPR012784 RNA polymerase-binding transcription factor DksA BED34_18040 IPR022380 Glutamyl-Q tRNA(Asp) synthetase BED34_18040 IPR000924 Glutamyl/glutaminyl-tRNA synthetase BED34_18040 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain BED34_18040 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED34_18045 IPR002646 Poly A polymerase, head domain BED34_18045 IPR025866 Polymerase A arginine-rich C-terminal domain BED34_18045 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain BED34_18045 IPR010206 Poly(A) polymerase I BED34_18050 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK BED34_18050 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily BED34_18055 IPR040442 Pyruvate kinase-like domain superfamily BED34_18055 IPR003700 Ketopantoate hydroxymethyltransferase BED34_18055 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily BED34_18060 IPR003721 Pantoate-beta-alanine ligase BED34_18060 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain BED34_18060 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED34_18065 IPR003190 Aspartate decarboxylase BED34_18065 IPR009010 Aspartate decarboxylase-like domain superfamily BED34_18070 IPR002509 NodB homology domain BED34_18070 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel BED34_18075 IPR000412 ABC-2 transporter BED34_18075 IPR013525 ABC-2 type transporter BED34_18080 IPR003593 AAA+ ATPase domain BED34_18080 IPR003439 ABC transporter-like BED34_18080 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_18080 IPR017871 ABC transporter, conserved site BED34_18085 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site BED34_18085 IPR036874 Carbonic anhydrase superfamily BED34_18085 IPR001765 Carbonic anhydrase BED34_18090 IPR005904 Hypoxanthine phosphoribosyl transferase BED34_18090 IPR000836 Phosphoribosyltransferase domain BED34_18090 IPR029057 Phosphoribosyltransferase-like BED34_18095 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal BED34_18095 IPR001117 Multicopper oxidase, type 1 BED34_18095 IPR008972 Cupredoxin BED34_18095 IPR011706 Multicopper oxidase, type 2 BED34_18095 IPR011707 Multicopper oxidase, type 3 BED34_18095 IPR002355 Multicopper oxidase, copper-binding site BED34_18095 IPR006311 Twin-arginine translocation pathway, signal sequence BED34_18100 IPR019114 Chaperone lipoprotein, PulS/OutS-like BED34_18100 IPR038432 PulS/OutS-like superfamily BED34_18105 IPR037163 Spermidine synthase, tetramerisation domain superfamily BED34_18105 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED34_18105 IPR030374 Polyamine biosynthesis domain BED34_18105 IPR001045 Spermidine/spermine synthases BED34_18105 IPR035246 Spermidine synthase, tetramerisation domain BED34_18105 IPR030373 Polyamine biosynthesis domain, conserved site BED34_18110 IPR009165 S-adenosylmethionine decarboxylase, bacterial BED34_18110 IPR016067 S-adenosylmethionine decarboxylase, core BED34_18110 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic BED34_18115 IPR041256 CDI immunity protein BED34_18120 IPR000620 EamA domain BED34_18125 IPR008249 Uncharacterised protein family UPF0231 BED34_18135 IPR010105 TonB-dependent siderophore receptor BED34_18135 IPR037066 TonB-dependent receptor, plug domain superfamily BED34_18135 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BED34_18135 IPR000531 TonB-dependent receptor-like, beta-barrel BED34_18135 IPR010917 TonB-dependent receptor, conserved site BED34_18135 IPR039426 Vitamin B12 transporter BtuB-like BED34_18135 IPR012910 TonB-dependent receptor, plug domain BED34_18140 IPR029062 Class I glutamine amidotransferase-like BED34_18140 IPR009057 Homeobox-like domain superfamily BED34_18140 IPR018060 DNA binding HTH domain, AraC-type BED34_18140 IPR018062 HTH domain AraC-type, conserved site BED34_18140 IPR020449 Transcription regulator HTH, AraC- type BED34_18140 IPR002818 DJ-1/PfpI BED34_18150 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site BED34_18150 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I BED34_18150 IPR006258 Dihydrolipoamide dehydrogenase BED34_18150 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily BED34_18150 IPR023753 FAD/NAD(P)-binding domain BED34_18150 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BED34_18150 IPR036188 FAD/NAD(P)-binding domain superfamily BED34_18155 IPR011053 Single hybrid motif BED34_18155 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site BED34_18155 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain BED34_18155 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex BED34_18155 IPR000089 Biotin/lipoyl attachment BED34_18155 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily BED34_18155 IPR004167 Peripheral subunit-binding domain BED34_18155 IPR036625 E3-binding domain superfamily BED34_18160 IPR005474 Transketolase, N-terminal BED34_18160 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal BED34_18160 IPR004660 Pyruvate dehydrogenase E1 component BED34_18160 IPR041621 Pyruvate dehydrogenase E1 component, middle domain BED34_18160 IPR029061 Thiamin diphosphate-binding fold BED34_18160 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II BED34_18165 IPR008920 Transcription regulator FadR/GntR, C-terminal BED34_18165 IPR000524 Transcription regulator HTH, GntR BED34_18165 IPR036390 Winged helix DNA-binding domain superfamily BED34_18165 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_18165 IPR011711 GntR, C-terminal BED34_18170 IPR004840 Amino acid permease, conserved site BED34_18170 IPR004841 Amino acid permease/ SLC12A domain BED34_18175 IPR031347 Protein AmpE BED34_18180 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily BED34_18180 IPR002502 N-acetylmuramoyl-L-alanine amidase domain BED34_18185 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily BED34_18185 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal BED34_18185 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal BED34_18185 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal BED34_18185 IPR004393 Nicotinate-nucleotide pyrophosphorylase BED34_18185 IPR013785 Aldolase-type TIM barrel BED34_18185 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD BED34_18190 IPR012902 Prokaryotic N-terminal methylation site BED34_18195 IPR007831 General secretory system II, protein E, N-terminal BED34_18195 IPR001482 Type II/IV secretion system protein BED34_18195 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_18200 IPR042094 Type II secretion system F domain superfamily BED34_18200 IPR018076 Type II secretion system F domain BED34_18200 IPR001992 Type II secretion system conserved site BED34_18200 IPR003004 GspF/PilC family BED34_18205 IPR005993 GMP reductase BED34_18205 IPR013785 Aldolase-type TIM barrel BED34_18205 IPR001093 IMP dehydrogenase/GMP reductase BED34_18205 IPR015875 IMP dehydrogenase / GMP reductase, conserved site BED34_18210 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_18210 IPR001977 Dephospho-CoA kinase BED34_18215 IPR009777 Cell division protein ZapD BED34_18215 IPR036268 ZapD domain superfamily BED34_18215 IPR027462 Z ring-associated protein D, C-terminal BED34_18220 IPR005584 DNA gyrase inhibitor YacG BED34_18220 IPR013088 Zinc finger, NHR/GATA-type BED34_18225 IPR015797 NUDIX hydrolase-like domain superfamily BED34_18225 IPR020084 NUDIX hydrolase, conserved site BED34_18225 IPR000086 NUDIX hydrolase domain BED34_18225 IPR020476 NUDIX hydrolase BED34_18225 IPR003561 Mutator MutT BED34_18230 IPR036266 SecA, Wing/Scaffold superfamily BED34_18230 IPR036670 SecA, preprotein cross-linking domain superfamily BED34_18230 IPR011130 SecA, preprotein cross-linking domain BED34_18230 IPR014018 SecA motor DEAD BED34_18230 IPR011115 SecA DEAD-like, N-terminal BED34_18230 IPR020937 SecA conserved site BED34_18230 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_18230 IPR004027 SEC-C motif BED34_18230 IPR000185 Protein translocase subunit SecA BED34_18230 IPR011116 SecA Wing/Scaffold BED34_18235 IPR009502 Secretion monitor BED34_18245 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase BED34_18245 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal BED34_18245 IPR020568 Ribosomal protein S5 domain 2-type fold BED34_18245 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal BED34_18250 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain BED34_18250 IPR000158 Cell division protein FtsZ BED34_18250 IPR003008 Tubulin/FtsZ, GTPase domain BED34_18250 IPR036525 Tubulin/FtsZ, GTPase domain superfamily BED34_18250 IPR020805 Cell division protein FtsZ, conserved site BED34_18250 IPR008280 Tubulin/FtsZ, C-terminal BED34_18250 IPR024757 Cell division protein FtsZ, C-terminal BED34_18255 IPR003494 SHS2 domain inserted in FtsA BED34_18255 IPR020823 Cell division protein FtsA BED34_18260 IPR034746 POTRA domain BED34_18260 IPR013685 POTRA domain, FtsQ-type BED34_18260 IPR005548 Cell division protein FtsQ/DivIB BED34_18260 IPR026579 Cell division protein FtsQ BED34_18265 IPR011095 D-alanine--D-alanine ligase, C-terminal BED34_18265 IPR011127 D-alanine--D-alanine ligase, N-terminal domain BED34_18265 IPR013815 ATP-grasp fold, subdomain 1 BED34_18265 IPR016185 Pre-ATP-grasp domain superfamily BED34_18265 IPR005905 D-alanine--D-alanine ligase BED34_18265 IPR011761 ATP-grasp fold BED34_18265 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site BED34_18270 IPR000713 Mur ligase, N-terminal catalytic domain BED34_18270 IPR013221 Mur ligase, central BED34_18270 IPR004101 Mur ligase, C-terminal BED34_18270 IPR036565 Mur-like, catalytic domain superfamily BED34_18270 IPR036615 Mur ligase, C-terminal domain superfamily BED34_18270 IPR005758 UDP-N-acetylmuramate--L-alanine ligase BED34_18275 IPR006009 N-acetylglucosaminyltransferase, MurG BED34_18275 IPR007235 Glycosyl transferase, family 28, C-terminal BED34_18275 IPR004276 Glycosyltransferase family 28, N-terminal domain BED34_18280 IPR013437 Probable peptidoglycan glycosyltransferase FtsW BED34_18280 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site BED34_18280 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA BED34_18285 IPR004101 Mur ligase, C-terminal BED34_18285 IPR036565 Mur-like, catalytic domain superfamily BED34_18285 IPR013221 Mur ligase, central BED34_18285 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase BED34_18285 IPR036615 Mur ligase, C-terminal domain superfamily BED34_18290 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase BED34_18290 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site BED34_18290 IPR000715 Glycosyl transferase, family 4 BED34_18295 IPR013221 Mur ligase, central BED34_18295 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase BED34_18295 IPR035911 MurE/MurF, N-terminal BED34_18295 IPR000713 Mur ligase, N-terminal catalytic domain BED34_18295 IPR036615 Mur ligase, C-terminal domain superfamily BED34_18295 IPR036565 Mur-like, catalytic domain superfamily BED34_18295 IPR004101 Mur ligase, C-terminal BED34_18300 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase BED34_18300 IPR035911 MurE/MurF, N-terminal BED34_18300 IPR000713 Mur ligase, N-terminal catalytic domain BED34_18300 IPR013221 Mur ligase, central BED34_18300 IPR036615 Mur ligase, C-terminal domain superfamily BED34_18300 IPR004101 Mur ligase, C-terminal BED34_18300 IPR036565 Mur-like, catalytic domain superfamily BED34_18305 IPR036138 Penicillin-binding protein, dimerisation domain superfamily BED34_18305 IPR012338 Beta-lactamase/transpeptidase-like BED34_18305 IPR005311 Penicillin-binding protein, dimerisation domain BED34_18305 IPR037532 Peptidoglycan D,D-transpeptidase FtsI BED34_18305 IPR001460 Penicillin-binding protein, transpeptidase BED34_18315 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED34_18315 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily BED34_18315 IPR002903 Ribosomal RNA small subunit methyltransferase H BED34_18320 IPR038619 MraZ superfamily BED34_18320 IPR003444 Transcriptional regulator MraZ BED34_18320 IPR007159 SpoVT-AbrB domain BED34_18320 IPR035644 MraZ, C-terminal BED34_18320 IPR035642 MraZ, N-terminal BED34_18320 IPR037914 SpoVT-AbrB domain superfamily BED34_18320 IPR020603 MraZ domain BED34_18325 IPR010574 L-alanine exporter AlaE BED34_18330 IPR001761 Periplasmic binding protein/LacI sugar binding domain BED34_18330 IPR028082 Periplasmic binding protein-like I BED34_18330 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BED34_18330 IPR000843 LacI-type HTH domain BED34_18330 IPR012781 D-fructose-responsive transcription factor BED34_18335 IPR019455 Acetolactate synthase, small subunit, C-terminal BED34_18335 IPR004789 Acetolactate synthase, small subunit BED34_18335 IPR039557 AHAS, ACT domain BED34_18335 IPR002912 ACT domain BED34_18335 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal BED34_18340 IPR012846 Acetolactate synthase, large subunit, biosynthetic BED34_18340 IPR000399 TPP-binding enzyme, conserved site BED34_18340 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain BED34_18340 IPR012000 Thiamine pyrophosphate enzyme, central domain BED34_18340 IPR029061 Thiamin diphosphate-binding fold BED34_18340 IPR029035 DHS-like NAD/FAD-binding domain superfamily BED34_18340 IPR039368 Acetolactate synthase large subunit, TPP binding domain BED34_18340 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding BED34_18345 IPR042099 AMP-dependent synthetase-like superfamily BED34_18345 IPR020845 AMP-binding, conserved site BED34_18345 IPR000873 AMP-dependent synthetase/ligase BED34_18350 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_18350 IPR000847 Transcription regulator HTH, LysR BED34_18350 IPR005119 LysR, substrate-binding BED34_18350 IPR036390 Winged helix DNA-binding domain superfamily BED34_18355 IPR000891 Pyruvate carboxyltransferase BED34_18355 IPR005671 2-isopropylmalate synthase, bacterial-type BED34_18355 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain BED34_18355 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily BED34_18355 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site BED34_18355 IPR013785 Aldolase-type TIM barrel BED34_18360 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site BED34_18360 IPR024084 Isopropylmalate dehydrogenase-like domain BED34_18360 IPR004429 Isopropylmalate dehydrogenase BED34_18365 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 BED34_18365 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain BED34_18365 IPR033941 3-Isopropylmalate dehydratase, catalytic domain BED34_18365 IPR036008 Aconitase, iron-sulfur domain BED34_18365 IPR018136 Aconitase family, 4Fe-4S cluster binding site BED34_18365 IPR004430 3-isopropylmalate dehydratase, large subunit BED34_18370 IPR004431 3-isopropylmalate dehydratase, small subunit BED34_18370 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel BED34_18370 IPR033940 3-isopropylmalate dehydratase, swivel domain BED34_18370 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain BED34_18385 IPR020846 Major facilitator superfamily domain BED34_18385 IPR036259 MFS transporter superfamily BED34_18385 IPR004750 Sugar efflux BED34_18385 IPR011701 Major facilitator superfamily BED34_18400 IPR036390 Winged helix DNA-binding domain superfamily BED34_18400 IPR023767 Transcriptional regulator SgrR BED34_18400 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain BED34_18400 IPR039424 Solute-binding protein family 5 BED34_18400 IPR000914 Solute-binding protein family 5 domain BED34_18415 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria BED34_18415 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter BED34_18415 IPR006061 Solute-binding family 1, conserved site BED34_18420 IPR005947 Thiamine ABC transporter, permease protein BED34_18420 IPR035906 MetI-like superfamily BED34_18420 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED34_18425 IPR003593 AAA+ ATPase domain BED34_18425 IPR003439 ABC transporter-like BED34_18425 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ BED34_18425 IPR017871 ABC transporter, conserved site BED34_18425 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_18430 IPR032818 DedA family BED34_18430 IPR032816 SNARE associated Golgi protein BED34_18435 IPR042087 DNA polymerase family B, C-terminal domain BED34_18435 IPR036397 Ribonuclease H superfamily BED34_18435 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain BED34_18435 IPR006172 DNA-directed DNA polymerase, family B BED34_18435 IPR017964 DNA-directed DNA polymerase, family B, conserved site BED34_18435 IPR012337 Ribonuclease H-like superfamily BED34_18435 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain BED34_18435 IPR023211 DNA polymerase, palm domain superfamily BED34_18440 IPR023949 RNA polymerase-associated protein RapA BED34_18440 IPR000330 SNF2-related, N-terminal domain BED34_18440 IPR014001 Helicase superfamily 1/2, ATP-binding domain BED34_18440 IPR001650 Helicase, C-terminal BED34_18440 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_18440 IPR022737 RNA polymerase recycling, bacterial, C-terminal BED34_18440 IPR038718 SNF2-like, N-terminal domain superfamily BED34_18440 IPR040765 RapA, N-terminal Tudor like domain 1 BED34_18440 IPR040766 RapA, N-terminal Tudor-like domain 2 BED34_18445 IPR013117 Intimin, C-terminal BED34_18445 IPR003535 Intimin/invasin bacterial adhesion mediator protein BED34_18445 IPR013783 Immunoglobulin-like fold BED34_18445 IPR038177 Inverse autotransporter, beta-domain superfamily BED34_18445 IPR024519 Inverse autotransporter, beta-domain BED34_18445 IPR015217 Invasin, domain 3 BED34_18445 IPR008964 Invasin/intimin cell-adhesion fragments BED34_18445 IPR016187 C-type lectin fold BED34_18445 IPR016186 C-type lectin-like/link domain superfamily BED34_18445 IPR003344 Big-1 (bacterial Ig-like domain 1) domain BED34_18450 IPR006145 Pseudouridine synthase, RsuA/RluA BED34_18450 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site BED34_18450 IPR020103 Pseudouridine synthase, catalytic domain superfamily BED34_18455 IPR007791 Co-chaperone DjlA, N-terminal BED34_18455 IPR036869 Chaperone J-domain superfamily BED34_18455 IPR029024 TerB-like BED34_18455 IPR023749 Co-chaperone DjlA BED34_18455 IPR001623 DnaJ domain BED34_18460 IPR007543 LptD, C-terminal BED34_18460 IPR005653 Organic solvent tolerance-like, N-terminal BED34_18460 IPR020889 LPS-assembly protein LptD BED34_18465 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type BED34_18465 IPR027304 Trigger factor/SurA domain superfamily BED34_18465 IPR015391 SurA N-terminal BED34_18465 IPR023034 Peptidyl-prolyl isomerase SurA BED34_18470 IPR005255 PdxA family BED34_18470 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase BED34_18475 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED34_18475 IPR011530 Ribosomal RNA adenine dimethylase BED34_18475 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal BED34_18475 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site BED34_18475 IPR023165 rRNA adenine dimethylase-like BED34_18475 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm BED34_18480 IPR036767 ApaG domain superfamily BED34_18480 IPR007474 ApaG domain BED34_18480 IPR023065 Uncharacterised protein family ApaG BED34_18485 IPR029052 Metallo-dependent phosphatase-like BED34_18485 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type BED34_18485 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) BED34_18490 IPR001796 Dihydrofolate reductase domain BED34_18490 IPR024072 Dihydrofolate reductase-like domain superfamily BED34_18490 IPR017925 Dihydrofolate reductase conserved site BED34_18490 IPR012259 Dihydrofolate reductase BED34_18495 IPR024528 Threonine/Serine exporter, ThrE BED34_18495 IPR020914 Uncharacterised protein family UPF0442 BED34_18500 IPR010619 Putative threonine/serine exporter BED34_18505 IPR004778 Homoserine/Threonine efflux protein BED34_18505 IPR001123 Amino acid exporter protein, LeuE-type BED34_18510 IPR016185 Pre-ATP-grasp domain superfamily BED34_18510 IPR011761 ATP-grasp fold BED34_18510 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain BED34_18510 IPR036914 Methylglyoxal synthase-like domain superfamily BED34_18510 IPR011607 Methylglyoxal synthase-like domain BED34_18510 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain BED34_18510 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain BED34_18510 IPR006275 Carbamoyl-phosphate synthase, large subunit BED34_18510 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain BED34_18510 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily BED34_18515 IPR017926 Glutamine amidotransferase BED34_18515 IPR006274 Carbamoyl-phosphate synthase, small subunit BED34_18515 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain BED34_18515 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily BED34_18515 IPR029062 Class I glutamine amidotransferase-like BED34_18515 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain BED34_18520 IPR022663 Dihydrodipicolinate reductase, C-terminal BED34_18520 IPR036291 NAD(P)-binding domain superfamily BED34_18520 IPR023940 Dihydrodipicolinate reductase BED34_18520 IPR022664 Dihydrodipicolinate reductase, conserved site BED34_18520 IPR000846 Dihydrodipicolinate reductase, N-terminal BED34_18525 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase BED34_18530 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain BED34_18535 IPR001872 Peptidase A8, signal peptidase II BED34_18540 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain BED34_18540 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site BED34_18540 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding BED34_18540 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED34_18540 IPR002300 Aminoacyl-tRNA synthetase, class Ia BED34_18540 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain BED34_18540 IPR010663 Zinc finger, FPG/IleRS-type BED34_18540 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding BED34_18540 IPR023585 Isoleucine-tRNA ligase, type 1 BED34_18540 IPR002301 Isoleucine-tRNA ligase BED34_18545 IPR023465 Riboflavin kinase domain superfamily BED34_18545 IPR002606 Riboflavin kinase, bacterial BED34_18545 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED34_18545 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic BED34_18545 IPR023468 Riboflavin kinase BED34_18545 IPR015864 FAD synthetase BED34_18555 IPR036510 Ribosomal protein S20 superfamily BED34_18555 IPR002583 Ribosomal protein S20 BED34_18560 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_18560 IPR005119 LysR, substrate-binding BED34_18560 IPR000847 Transcription regulator HTH, LysR BED34_18560 IPR036390 Winged helix DNA-binding domain superfamily BED34_18565 IPR023171 Na/H antiporter domain superfamily BED34_18565 IPR004670 Na+/H+ antiporter NhaA BED34_18570 IPR001305 Heat shock protein DnaJ, cysteine-rich domain BED34_18570 IPR018253 DnaJ domain, conserved site BED34_18570 IPR001623 DnaJ domain BED34_18570 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily BED34_18570 IPR008971 HSP40/DnaJ peptide-binding BED34_18570 IPR036869 Chaperone J-domain superfamily BED34_18570 IPR012724 Chaperone DnaJ BED34_18570 IPR002939 Chaperone DnaJ, C-terminal BED34_18575 IPR013126 Heat shock protein 70 family BED34_18575 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily BED34_18575 IPR012725 Chaperone DnaK BED34_18575 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily BED34_18575 IPR018181 Heat shock protein 70, conserved site BED34_18580 IPR000791 Acetate transporter GPR1/FUN34/SatP family BED34_18590 IPR020846 Major facilitator superfamily domain BED34_18590 IPR005829 Sugar transporter, conserved site BED34_18590 IPR011701 Major facilitator superfamily BED34_18590 IPR036259 MFS transporter superfamily BED34_18595 IPR008284 Molybdenum cofactor biosynthesis, conserved site BED34_18595 IPR001453 MoaB/Mog domain BED34_18595 IPR036425 MoaB/Mog-like domain superfamily BED34_18600 IPR004730 Transaldolase type 1 BED34_18600 IPR013785 Aldolase-type TIM barrel BED34_18600 IPR018225 Transaldolase, active site BED34_18600 IPR001585 Transaldolase/Fructose-6-phosphate aldolase BED34_18605 IPR005583 Peroxide stress protein YaaA BED34_18610 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED34_18610 IPR003346 Transposase, IS116/IS110/IS902 BED34_18615 IPR001926 Pyridoxal-phosphate dependent enzyme BED34_18615 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site BED34_18615 IPR029144 Threonine synthase, N-terminal BED34_18615 IPR037158 Threonine synthase, N-terminal domain superfamily BED34_18615 IPR004450 Threonine synthase-like BED34_18615 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BED34_18620 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BED34_18620 IPR000870 Homoserine kinase BED34_18620 IPR013750 GHMP kinase, C-terminal domain BED34_18620 IPR036554 GHMP kinase, C-terminal domain superfamily BED34_18620 IPR006204 GHMP kinase N-terminal domain BED34_18620 IPR020568 Ribosomal protein S5 domain 2-type fold BED34_18620 IPR006203 GHMP kinase, ATP-binding, conserved site BED34_18625 IPR001048 Aspartate/glutamate/uridylate kinase BED34_18625 IPR036291 NAD(P)-binding domain superfamily BED34_18625 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding BED34_18625 IPR001341 Aspartate kinase BED34_18625 IPR002912 ACT domain BED34_18625 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I BED34_18625 IPR019811 Homoserine dehydrogenase, conserved site BED34_18625 IPR027795 CASTOR, ACT domain BED34_18625 IPR001342 Homoserine dehydrogenase, catalytic BED34_18625 IPR018042 Aspartate kinase, conserved site BED34_18625 IPR036393 Acetylglutamate kinase-like superfamily BED34_18625 IPR041743 Bifunctional aspartokinase/homoserine dehydrogenase, N-terminal catalytic domain BED34_18635 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_18635 IPR039420 Transcriptional regulatory protein WalR-like BED34_18635 IPR001789 Signal transduction response regulator, receiver domain BED34_18635 IPR011006 CheY-like superfamily BED34_18635 IPR001867 OmpR/PhoB-type DNA-binding domain BED34_18635 IPR016032 Signal transduction response regulator, C-terminal effector BED34_18640 IPR010292 Uncharacterised protein family CreA BED34_18645 IPR010499 Bacterial transcription activator, effector binding BED34_18645 IPR020449 Transcription regulator HTH, AraC- type BED34_18645 IPR018062 HTH domain AraC-type, conserved site BED34_18645 IPR029442 GyrI-like small molecule binding domain BED34_18645 IPR018060 DNA binding HTH domain, AraC-type BED34_18645 IPR011256 Regulatory factor, effector binding domain superfamily BED34_18645 IPR009057 Homeobox-like domain superfamily BED34_18650 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site BED34_18650 IPR013078 Histidine phosphatase superfamily, clade-1 BED34_18650 IPR023086 Phosphoglycerate mutase, GpmB, probable BED34_18650 IPR029033 Histidine phosphatase superfamily BED34_18660 IPR038116 TrpR-like superfamily BED34_18660 IPR013335 Trp repressor, bacterial BED34_18660 IPR010921 Trp repressor/replication initiator BED34_18660 IPR000831 Trp repressor BED34_18665 IPR023346 Lysozyme-like domain superfamily BED34_18665 IPR008258 Transglycosylase SLT domain 1 BED34_18665 IPR000189 Prokaryotic transglycosylase, active site BED34_18665 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily BED34_18665 IPR012289 Lytic transglycosylase, superhelical linker BED34_18665 IPR008939 Lytic transglycosylase, superhelical U-shaped BED34_18670 IPR036412 HAD-like superfamily BED34_18670 IPR008250 P-type ATPase, A domain superfamily BED34_18670 IPR023298 P-type ATPase, transmembrane domain superfamily BED34_18670 IPR018303 P-type ATPase, phosphorylation site BED34_18670 IPR023299 P-type ATPase, cytoplasmic domain N BED34_18670 IPR023214 HAD superfamily BED34_18670 IPR004014 Cation-transporting P-type ATPase, N-terminal BED34_18670 IPR001757 P-type ATPase BED34_18670 IPR006068 Cation-transporting P-type ATPase, C-terminal BED34_18680 IPR029787 Nucleotide cyclase BED34_18680 IPR003660 HAMP domain BED34_18680 IPR033417 Periplasmic sensor domain CHASE8 BED34_18680 IPR000160 GGDEF domain BED34_18685 IPR006665 OmpA-like domain BED34_18685 IPR006664 Outer membrane protein, bacterial BED34_18685 IPR036737 OmpA-like domain superfamily BED34_18690 IPR032781 ABC-transporter extension domain BED34_18690 IPR003593 AAA+ ATPase domain BED34_18690 IPR017871 ABC transporter, conserved site BED34_18690 IPR022374 Energy-dependent translational throttle protein EttA BED34_18690 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_18690 IPR003439 ABC transporter-like BED34_18700 IPR036390 Winged helix DNA-binding domain superfamily BED34_18700 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_18700 IPR000847 Transcription regulator HTH, LysR BED34_18700 IPR005119 LysR, substrate-binding BED34_18705 IPR013149 Alcohol dehydrogenase, C-terminal BED34_18705 IPR036291 NAD(P)-binding domain superfamily BED34_18705 IPR013154 Alcohol dehydrogenase, N-terminal BED34_18705 IPR020843 Polyketide synthase, enoylreductase domain BED34_18705 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 BED34_18705 IPR011032 GroES-like superfamily BED34_18705 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site BED34_18720 IPR023190 Phosphoserine phosphatase, domain 2 BED34_18720 IPR023214 HAD superfamily BED34_18720 IPR036412 HAD-like superfamily BED34_18720 IPR041449 Phosphoserine phosphatase, N-terminal BED34_18725 IPR019305 Uncharacterised protein family Smp BED34_18730 IPR035994 Nucleoside phosphorylase superfamily BED34_18730 IPR000845 Nucleoside phosphorylase domain BED34_18730 IPR004402 Purine nucleoside phosphorylase DeoD-type BED34_18730 IPR018016 Nucleoside phosphorylase, conserved site BED34_18735 IPR017850 Alkaline-phosphatase-like, core domain superfamily BED34_18735 IPR010045 Phosphopentomutase BED34_18735 IPR006124 Metalloenzyme BED34_18735 IPR024052 Phosphopentomutase DeoB cap domain superfamily BED34_18740 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily BED34_18740 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily BED34_18740 IPR000312 Glycosyl transferase, family 3 BED34_18740 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily BED34_18740 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal BED34_18740 IPR017459 Glycosyl transferase family 3, N-terminal domain BED34_18740 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic BED34_18740 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site BED34_18740 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase BED34_18740 IPR013465 Thymidine phosphorylase BED34_18745 IPR023649 Deoxyribose-phosphate aldolase type II BED34_18745 IPR011343 Deoxyribose-phosphate aldolase BED34_18745 IPR013785 Aldolase-type TIM barrel BED34_18745 IPR002915 DeoC/FbaB/ lacD aldolase BED34_18750 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial BED34_18750 IPR011657 Concentrative nucleoside transporter C-terminal domain BED34_18750 IPR002668 Concentrative nucleoside transporter N-terminal domain BED34_18750 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain BED34_18750 IPR008276 Concentrative nucleoside transporter BED34_18755 IPR001130 TatD family BED34_18755 IPR018228 Deoxyribonuclease, TatD-related, conserved site BED34_18755 IPR032466 Metal-dependent hydrolase BED34_18760 IPR002641 Patatin-like phospholipase domain BED34_18760 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase BED34_18760 IPR037483 YjjU-like BED34_18765 IPR009760 Protein of unknown function DUF1328 BED34_18770 IPR007055 BON domain BED34_18770 IPR014004 Transport-associated and nodulation domain, bacteria BED34_18775 IPR031157 Tr-type G domain, conserved site BED34_18775 IPR032090 Peptide chain release factor 3, C-terminal BED34_18775 IPR004548 Peptide chain release factor 3 BED34_18775 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily BED34_18775 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_18775 IPR005225 Small GTP-binding protein domain BED34_18775 IPR000795 Transcription factor, GTP-binding domain BED34_18775 IPR009000 Translation protein, beta-barrel domain superfamily BED34_18775 IPR035647 EF-G domain III/V-like BED34_18775 IPR004161 Translation elongation factor EFTu-like, domain 2 BED34_18775 IPR041732 Peptide chain release factor 3, GTP-binding domain BED34_18780 IPR000182 GNAT domain BED34_18780 IPR016181 Acyl-CoA N-acyltransferase BED34_18780 IPR006464 N-acetyltransferase RimI/Ard1 BED34_18785 IPR036654 DNA polymerase III, psi subunit superfamily BED34_18785 IPR018382 DNA polymerase III, psi subunit, subgroup BED34_18785 IPR004615 DNA polymerase III, psi subunit BED34_18790 IPR007848 Methyltransferase small domain BED34_18790 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED34_18790 IPR023543 rRNA small subunit methyltransferase C BED34_18790 IPR013675 Methyltransferase small, N-terminal BED34_18790 IPR002052 DNA methylase, N-6 adenine-specific, conserved site BED34_18795 IPR023210 NADP-dependent oxidoreductase domain BED34_18795 IPR018170 Aldo/keto reductase, conserved site BED34_18795 IPR036812 NADP-dependent oxidoreductase domain superfamily BED34_18795 IPR020471 Aldo/keto reductase BED34_18810 IPR009885 Protein of unknown function DUF1435 BED34_18815 IPR039435 Diguanylate cyclase DosC, globin sensor domain BED34_18815 IPR000160 GGDEF domain BED34_18815 IPR009050 Globin-like superfamily BED34_18815 IPR012292 Globin/Protoglobin BED34_18815 IPR029787 Nucleotide cyclase BED34_18820 IPR010916 TonB box, conserved site BED34_18820 IPR012910 TonB-dependent receptor, plug domain BED34_18820 IPR000531 TonB-dependent receptor-like, beta-barrel BED34_18820 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BED34_18820 IPR011662 Secretin/TonB, short N-terminal domain BED34_18820 IPR010917 TonB-dependent receptor, conserved site BED34_18820 IPR010105 TonB-dependent siderophore receptor BED34_18820 IPR037066 TonB-dependent receptor, plug domain superfamily BED34_18830 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site BED34_18830 IPR011611 Carbohydrate kinase PfkB BED34_18830 IPR029056 Ribokinase-like BED34_18830 IPR002139 Ribokinase/fructokinase BED34_18835 IPR036998 Porin, LamB-type superfamily BED34_18835 IPR003192 Porin, LamB-type BED34_18835 IPR021570 LamB-type porin N-terminal domain BED34_18840 IPR036878 Glucose permease domain IIB BED34_18840 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site BED34_18840 IPR010973 Phosphotransferase system, sucrose-specific IIBC component BED34_18840 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component BED34_18840 IPR003352 Phosphotransferase system, EIIC BED34_18840 IPR001996 Phosphotransferase system, IIB component, type 1 BED34_18840 IPR013013 Phosphotransferase system, EIIC component, type 1 BED34_18845 IPR013148 Glycosyl hydrolase family 32, N-terminal BED34_18845 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily BED34_18845 IPR006232 Sucrose-6-phosphate hydrolase BED34_18845 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily BED34_18845 IPR001362 Glycoside hydrolase, family 32 BED34_18845 IPR013189 Glycosyl hydrolase family 32, C-terminal BED34_18845 IPR018053 Glycoside hydrolase, family 32, active site BED34_18850 IPR025997 Periplasmic binding protein BED34_18850 IPR028082 Periplasmic binding protein-like I BED34_18850 IPR012781 D-fructose-responsive transcription factor BED34_18850 IPR000843 LacI-type HTH domain BED34_18850 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BED34_18855 IPR035965 PAS domain superfamily BED34_18855 IPR002078 RNA polymerase sigma factor 54 interaction domain BED34_18855 IPR013767 PAS fold BED34_18855 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BED34_18855 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BED34_18855 IPR029016 GAF-like domain superfamily BED34_18855 IPR009057 Homeobox-like domain superfamily BED34_18855 IPR002197 DNA binding HTH domain, Fis-type BED34_18855 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_18855 IPR003593 AAA+ ATPase domain BED34_18855 IPR000014 PAS domain BED34_18860 IPR012334 Pectin lyase fold BED34_18860 IPR000070 Pectinesterase, catalytic BED34_18860 IPR033131 Pectinesterase, Asp active site BED34_18860 IPR011050 Pectin lyase fold/virulence factor BED34_18885 IPR009057 Homeobox-like domain superfamily BED34_18885 IPR038717 Tc1-like transposase, DDE domain BED34_18885 IPR012337 Ribonuclease H-like superfamily BED34_18885 IPR025959 Winged helix-turn helix domain BED34_18890 IPR031730 Carbamoyltransferase, C-terminal BED34_18890 IPR038152 Carbamoyltransferase, C-terminal domain superfamily BED34_18890 IPR003696 Carbamoyltransferase BED34_18905 IPR012737 Dihydroxyacetone kinase, subunit L BED34_18905 IPR004007 DhaL domain BED34_18905 IPR036117 DhaL domain superfamily BED34_18910 IPR004006 DhaK domain BED34_18910 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 BED34_18915 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA BED34_18915 IPR016205 Glycerol dehydrogenase BED34_18915 IPR018211 Alcohol dehydrogenase, iron-type, conserved site BED34_18920 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BED34_18920 IPR001036 Acriflavin resistance protein BED34_18925 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BED34_18925 IPR006143 RND efflux pump, membrane fusion protein BED34_18930 IPR003876 Arginine deiminase BED34_18945 IPR002201 Glycosyl transferase, family 9 BED34_18945 IPR011916 Lipopolysaccharide heptosyltransferase III, putative BED34_18950 IPR033676 Autoinducer-2 kinase BED34_18950 IPR000577 Carbohydrate kinase, FGGY BED34_18950 IPR018485 Carbohydrate kinase, FGGY, C-terminal BED34_18950 IPR018484 Carbohydrate kinase, FGGY, N-terminal BED34_18955 IPR012318 Crp-type HTH domain BED34_18955 IPR037171 NagB/RpiA transferase-like BED34_18955 IPR007324 Sugar-binding domain, putative BED34_18955 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_18960 IPR030281 Autoinducer 2 import ATP-binding protein LsrA BED34_18960 IPR003593 AAA+ ATPase domain BED34_18960 IPR003439 ABC transporter-like BED34_18960 IPR017871 ABC transporter, conserved site BED34_18960 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_18965 IPR001851 ABC transporter, permease BED34_18970 IPR001851 ABC transporter, permease BED34_18975 IPR028082 Periplasmic binding protein-like I BED34_18975 IPR025997 Periplasmic binding protein BED34_18975 IPR030159 Autoinducer 2 ABC transporter, substrate-binding protein LsrB BED34_18980 IPR033673 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase BED34_18980 IPR013785 Aldolase-type TIM barrel BED34_18980 IPR041720 Aldolase FbaB-like, archaeal-type BED34_18980 IPR002915 DeoC/FbaB/ lacD aldolase BED34_18985 IPR033672 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase BED34_18985 IPR007138 Antibiotic biosynthesis monooxygenase domain BED34_18985 IPR011008 Dimeric alpha-beta barrel BED34_18995 IPR019637 Protein of unknown function DUF2501 BED34_19000 IPR001207 Transposase, mutator type BED34_19010 IPR009057 Homeobox-like domain superfamily BED34_19010 IPR002514 Transposase IS3/IS911family BED34_19030 IPR005495 Permease LptG/LptF-related BED34_19030 IPR030923 LPS export ABC transporter permease LptG BED34_19035 IPR005495 Permease LptG/LptF-related BED34_19035 IPR030922 LPS export ABC transporter permease LptF BED34_19040 IPR023042 Peptidase M17, leucine aminopeptidase BED34_19040 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal BED34_19040 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B BED34_19040 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal BED34_19045 IPR007459 DNA polymerase III chi subunit, HolC BED34_19045 IPR036768 DNA polymerase III subunit chi superfamily BED34_19050 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding BED34_19050 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm BED34_19050 IPR002303 Valine-tRNA ligase BED34_19050 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED34_19050 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily BED34_19050 IPR033705 Valyl tRNA synthetase, anticodon-binding domain BED34_19050 IPR002300 Aminoacyl-tRNA synthetase, class Ia BED34_19050 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site BED34_19050 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm BED34_19050 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding BED34_19050 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain BED34_19055 IPR016181 Acyl-CoA N-acyltransferase BED34_19055 IPR000182 GNAT domain BED34_19060 IPR036701 RraB-like superfamily BED34_19060 IPR016716 Regulator of ribonuclease activity B BED34_19060 IPR009671 Regulator of ribonuclease activity B domain BED34_19065 IPR002292 Ornithine/putrescine carbamoyltransferase BED34_19065 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding BED34_19065 IPR006130 Aspartate/ornithine carbamoyltransferase BED34_19065 IPR024904 Ornithine carbamoyltransferase BED34_19065 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain BED34_19065 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily BED34_19070 IPR037012 YhcH/YjgK/YiaL superfamily BED34_19070 IPR004375 YhcH/YjgK/YiaL family BED34_19080 IPR035906 MetI-like superfamily BED34_19080 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED34_19090 IPR003593 AAA+ ATPase domain BED34_19090 IPR003439 ABC transporter-like BED34_19090 IPR017871 ABC transporter, conserved site BED34_19090 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal BED34_19090 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_19095 IPR003439 ABC transporter-like BED34_19095 IPR003593 AAA+ ATPase domain BED34_19095 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal BED34_19095 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_19095 IPR017871 ABC transporter, conserved site BED34_19110 IPR013785 Aldolase-type TIM barrel BED34_19110 IPR034457 Organic radical-activating enzymes BED34_19110 IPR001989 Radical-activating enzyme, conserved site BED34_19110 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic BED34_19125 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily BED34_19125 IPR012702 Phosphonate C-P lyase system, transcriptional regulator PhnF BED34_19125 IPR011663 UbiC transcription regulator-associated BED34_19125 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_19125 IPR036390 Winged helix DNA-binding domain superfamily BED34_19125 IPR000524 Transcription regulator HTH, GntR BED34_19130 IPR009609 Phosphonate metabolism PhnG BED34_19135 IPR038058 PhnH-like superfamily BED34_19135 IPR008772 Bacterial phosphonate metabolism, PhnH BED34_19140 IPR008773 Phosphonate metabolism protein PhnI BED34_19145 IPR010306 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase BED34_19150 IPR003593 AAA+ ATPase domain BED34_19150 IPR003439 ABC transporter-like BED34_19150 IPR017871 ABC transporter, conserved site BED34_19150 IPR012700 Phosphonate C-P lyase system, PhnK BED34_19150 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_19155 IPR003593 AAA+ ATPase domain BED34_19155 IPR003439 ABC transporter-like BED34_19155 IPR017871 ABC transporter, conserved site BED34_19155 IPR012701 Phosphonate C-P lyase system, PhnL BED34_19155 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_19160 IPR013108 Amidohydrolase 3 BED34_19160 IPR011059 Metal-dependent hydrolase, composite domain superfamily BED34_19160 IPR032466 Metal-dependent hydrolase BED34_19160 IPR012696 Phosphonate metabolism PhnM BED34_19170 IPR017693 Phosphonate metabolism protein PhnP BED34_19170 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BED34_19170 IPR035682 Phosphonate metabolism protein, MBL domain BED34_19170 IPR001279 Metallo-beta-lactamase BED34_19175 IPR016040 NAD(P)-binding domain BED34_19175 IPR036291 NAD(P)-binding domain superfamily BED34_19175 IPR000534 Semialdehyde dehydrogenase, NAD-binding BED34_19180 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily BED34_19180 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family BED34_19190 IPR012349 FMN-binding split barrel BED34_19190 IPR011194 Uncharacterised protein family UPF0306 BED34_19200 IPR040582 MalK, OB fold domain BED34_19200 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_19200 IPR003593 AAA+ ATPase domain BED34_19200 IPR003439 ABC transporter-like BED34_19200 IPR008995 Molybdate/tungstate binding, C-terminal BED34_19200 IPR005116 Transport-associated OB, type 1 BED34_19200 IPR017871 ABC transporter, conserved site BED34_19205 IPR035906 MetI-like superfamily BED34_19205 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED34_19215 IPR006059 Bacterial extracellular solute-binding protein BED34_19225 IPR012480 Heparinase II/III-like BED34_19225 IPR008929 Chondroitin AC/alginate lyase BED34_19225 IPR008397 Alginate lyase domain BED34_19230 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED34_19230 IPR000310 Orn/Lys/Arg decarboxylase, major domain BED34_19230 IPR027464 Ornithine decarboxylase, N-terminal BED34_19230 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal BED34_19230 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED34_19230 IPR027568 Ornithine decarboxylase SpeF BED34_19230 IPR015424 Pyridoxal phosphate-dependent transferase BED34_19230 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily BED34_19230 IPR011193 Ornithine/lysine/arginine decarboxylase BED34_19230 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal BED34_19230 IPR011006 CheY-like superfamily BED34_19235 IPR002293 Amino acid/polyamine transporter I BED34_19235 IPR004754 Amino acid antiporter BED34_19235 IPR027566 Putrescine transporter PotE BED34_19245 IPR016181 Acyl-CoA N-acyltransferase BED34_19245 IPR000182 GNAT domain BED34_19265 IPR005130 Serine dehydratase-like, alpha subunit BED34_19265 IPR021144 Uncharacterised protein family UPF0597 BED34_19275 IPR010131 RND efflux system, outer membrane lipoprotein, NodT BED34_19275 IPR012640 Membrane lipoprotein, lipid attachment site BED34_19275 IPR003423 Outer membrane efflux protein BED34_19280 IPR019949 Luciferase family oxidoreductase, group 1 BED34_19280 IPR011251 Luciferase-like domain BED34_19280 IPR036661 Luciferase-like domain superfamily BED34_19290 IPR028618 ATP-dependent RNA helicase DeaD BED34_19290 IPR014001 Helicase superfamily 1/2, ATP-binding domain BED34_19290 IPR021046 Cold-shock protein, DEAD box A, C-terminal BED34_19290 IPR034415 CsdA, RNA recognition motif BED34_19290 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain BED34_19290 IPR011545 DEAD/DEAH box helicase domain BED34_19290 IPR001650 Helicase, C-terminal BED34_19290 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site BED34_19290 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_19290 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily BED34_19290 IPR014014 RNA helicase, DEAD-box type, Q motif BED34_19295 IPR013026 Tetratricopeptide repeat-containing domain BED34_19295 IPR019734 Tetratricopeptide repeat BED34_19295 IPR013105 Tetratricopeptide repeat 2 BED34_19295 IPR011990 Tetratricopeptide-like helical domain superfamily BED34_19295 IPR023605 Lipoprotein NlpI BED34_19300 IPR003029 S1 domain BED34_19300 IPR036345 Exoribonuclease, PH domain 2 superfamily BED34_19300 IPR004087 K Homology domain BED34_19300 IPR036612 K Homology domain, type 1 superfamily BED34_19300 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain BED34_19300 IPR012162 Polyribonucleotide nucleotidyltransferase BED34_19300 IPR027408 PNPase/RNase PH domain superfamily BED34_19300 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily BED34_19300 IPR020568 Ribosomal protein S5 domain 2-type fold BED34_19300 IPR015847 Exoribonuclease, phosphorolytic domain 2 BED34_19300 IPR001247 Exoribonuclease, phosphorolytic domain 1 BED34_19300 IPR022967 RNA-binding domain, S1 BED34_19300 IPR012340 Nucleic acid-binding, OB-fold BED34_19300 IPR004088 K Homology domain, type 1 BED34_19305 IPR005290 Ribosomal protein S15, bacterial-type BED34_19305 IPR009068 S15/NS1, RNA-binding BED34_19305 IPR000589 Ribosomal protein S15 BED34_19310 IPR002501 Pseudouridine synthase II, N-terminal BED34_19310 IPR020103 Pseudouridine synthase, catalytic domain superfamily BED34_19310 IPR032819 tRNA pseudouridylate synthase B, C-terminal BED34_19310 IPR014780 tRNA pseudouridine synthase II, TruB BED34_19310 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal BED34_19310 IPR036974 PUA domain superfamily BED34_19310 IPR015947 PUA-like superfamily BED34_19315 IPR020053 Ribosome-binding factor A, conserved site BED34_19315 IPR023799 Ribosome-binding factor A domain superfamily BED34_19315 IPR000238 Ribosome-binding factor A BED34_19315 IPR015946 K homology domain-like, alpha/beta BED34_19320 IPR015760 Translation initiation factor IF- 2 BED34_19320 IPR023115 Translation initiation factor IF- 2, domain 3 BED34_19320 IPR000178 Translation initiation factor aIF-2, bacterial-like BED34_19320 IPR000795 Transcription factor, GTP-binding domain BED34_19320 IPR036925 Translation initiation factor IF-2, domain 3 superfamily BED34_19320 IPR005225 Small GTP-binding protein domain BED34_19320 IPR006847 Translation initiation factor IF-2, N-terminal BED34_19320 IPR013575 Initiation factor 2 associated domain, bacterial BED34_19320 IPR004161 Translation elongation factor EFTu-like, domain 2 BED34_19320 IPR009061 Putative DNA-binding domain superfamily BED34_19320 IPR009000 Translation protein, beta-barrel domain superfamily BED34_19320 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_19325 IPR025249 KH domain, NusA-like BED34_19325 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical BED34_19325 IPR015946 K homology domain-like, alpha/beta BED34_19325 IPR009019 K homology domain superfamily, prokaryotic type BED34_19325 IPR030842 Transcription termination/antitermination protein NusA, bacterial BED34_19325 IPR003029 S1 domain BED34_19325 IPR036555 NusA, N-terminal domain superfamily BED34_19325 IPR022967 RNA-binding domain, S1 BED34_19325 IPR013735 Transcription factor NusA, N-terminal BED34_19325 IPR010214 Transcription termination factor NusA, C-terminal duplication BED34_19325 IPR010213 Transcription termination factor NusA BED34_19325 IPR012340 Nucleic acid-binding, OB-fold BED34_19330 IPR003728 Ribosome maturation factor RimP BED34_19330 IPR028998 Ribosome maturation factor RimP, C-terminal BED34_19330 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily BED34_19330 IPR035956 RimP, N-terminal domain superfamily BED34_19330 IPR028989 Ribosome maturation factor RimP, N-terminal BED34_19345 IPR004692 Preprotein translocase SecG subunit BED34_19350 IPR005843 Alpha-D-phosphohexomutase, C-terminal BED34_19350 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily BED34_19350 IPR016066 Alpha-D-phosphohexomutase, conserved site BED34_19350 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III BED34_19350 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I BED34_19350 IPR005841 Alpha-D-phosphohexomutase superfamily BED34_19350 IPR006352 Phosphoglucosamine mutase, bacterial type BED34_19350 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II BED34_19350 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III BED34_19355 IPR011005 Dihydropteroate synthase-like BED34_19355 IPR000489 Pterin-binding domain BED34_19355 IPR006390 Dihydropteroate synthase BED34_19360 IPR041569 AAA ATPase, AAA+ lid domain BED34_19360 IPR003959 ATPase, AAA-type, core BED34_19360 IPR003960 ATPase, AAA-type, conserved site BED34_19360 IPR005936 Peptidase, FtsH BED34_19360 IPR003593 AAA+ ATPase domain BED34_19360 IPR011546 Peptidase M41, FtsH extracellular BED34_19360 IPR000642 Peptidase M41 BED34_19360 IPR037219 Peptidase M41-like BED34_19360 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_19365 IPR002877 Ribosomal RNA methyltransferase FtsJ domain BED34_19365 IPR015507 Ribosomal RNA large subunit methyltransferase E BED34_19365 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED34_19365 IPR004512 Ribosomal RNA methyltransferase E, gammaproteobacteria BED34_19370 IPR035920 YhbY-like superfamily BED34_19370 IPR001890 RNA-binding, CRM domain BED34_19370 IPR017924 RNA-binding protein YhbY BED34_19375 IPR006359 Transcription elongation factor GreA BED34_19375 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal BED34_19375 IPR023459 Transcription elongation factor GreA/GreB family BED34_19375 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal BED34_19375 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily BED34_19375 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily BED34_19375 IPR028624 Transcription elongation factor GreA/GreB BED34_19375 IPR018151 Transcription elongation factor, GreA/GreB, conserved site BED34_19380 IPR012338 Beta-lactamase/transpeptidase-like BED34_19380 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C BED34_19385 IPR011006 CheY-like superfamily BED34_19385 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_19385 IPR039420 Transcriptional regulatory protein WalR-like BED34_19385 IPR001789 Signal transduction response regulator, receiver domain BED34_19385 IPR001867 OmpR/PhoB-type DNA-binding domain BED34_19390 IPR003660 HAMP domain BED34_19390 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BED34_19390 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BED34_19390 IPR003594 Histidine kinase/HSP90-like ATPase BED34_19390 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BED34_19390 IPR005467 Histidine kinase domain BED34_19390 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BED34_19395 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_19395 IPR006073 GTP binding domain BED34_19395 IPR031167 OBG-type guanine nucleotide-binding (G) domain BED34_19395 IPR035101 GTP-binding protein, Obg-type BED34_19395 IPR014100 GTP-binding protein Obg/CgtA BED34_19395 IPR006074 GTP1/OBG, conserved site BED34_19395 IPR006169 GTP1/OBG domain BED34_19395 IPR036726 GTP1/OBG domain superfamily BED34_19400 IPR000620 EamA domain BED34_19405 IPR001684 Ribosomal protein L27 BED34_19405 IPR018261 Ribosomal protein L27, conserved site BED34_19410 IPR001787 Ribosomal protein L21 BED34_19410 IPR018258 Ribosomal protein L21, conserved site BED34_19410 IPR036164 L21-like superfamily BED34_19410 IPR028909 Ribosomal protein L21-like BED34_19415 IPR033749 Polyprenyl synthetase, conserved site BED34_19415 IPR008949 Isoprenoid synthase domain superfamily BED34_19415 IPR000092 Polyprenyl synthetase BED34_19425 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BED34_19425 IPR038722 Ner, winged helix-turn-helix DNA-binding domain BED34_19430 IPR036291 NAD(P)-binding domain superfamily BED34_19430 IPR001236 Lactate/malate dehydrogenase, N-terminal BED34_19430 IPR001557 L-lactate/malate dehydrogenase BED34_19430 IPR023958 Malate dehydrogenase, type 1, bacterial BED34_19430 IPR010097 Malate dehydrogenase, type 1 BED34_19430 IPR022383 Lactate/malate dehydrogenase, C-terminal BED34_19430 IPR001252 Malate dehydrogenase, active site BED34_19430 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal BED34_19435 IPR001669 Arginine repressor BED34_19435 IPR036390 Winged helix DNA-binding domain superfamily BED34_19435 IPR020899 Arginine repressor, C-terminal BED34_19435 IPR020900 Arginine repressor, DNA-binding domain BED34_19435 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_19435 IPR036251 Arginine repressor, C-terminal domain superfamily BED34_19445 IPR036615 Mur ligase, C-terminal domain superfamily BED34_19445 IPR004101 Mur ligase, C-terminal BED34_19445 IPR000713 Mur ligase, N-terminal catalytic domain BED34_19445 IPR013221 Mur ligase, central BED34_19445 IPR036565 Mur-like, catalytic domain superfamily BED34_19445 IPR005757 Murein peptide ligase BED34_19450 IPR028343 Fructose-1,6-bisphosphatase BED34_19450 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal BED34_19450 IPR020548 Fructose-1,6-bisphosphatase, active site BED34_19450 IPR000146 Fructose-1,6-bisphosphatase class 1 BED34_19455 IPR004090 Chemotaxis methyl-accepting receptor BED34_19455 IPR003660 HAMP domain BED34_19455 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BED34_19455 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding BED34_19455 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily BED34_19455 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site BED34_19460 IPR008162 Inorganic pyrophosphatase BED34_19460 IPR036649 Inorganic pyrophosphatase superfamily BED34_19465 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like BED34_19465 IPR039126 Gamma-glutamylaminecyclotransferase BED34_19465 IPR013024 Gamma-glutamyl cyclotransferase-like BED34_19465 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily BED34_19470 IPR007452 Translocation and assembly module TamB BED34_19475 IPR034746 POTRA domain BED34_19475 IPR035243 TamA, POTRA domain 1 BED34_19475 IPR039910 Surface antigen D15-like BED34_19475 IPR010827 POTRA domain, BamA/TamA-like BED34_19475 IPR000184 Bacterial surface antigen (D15) BED34_19480 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily BED34_19480 IPR002569 Peptide methionine sulphoxide reductase MsrA BED34_19485 IPR002550 CNNM, transmembrane domain BED34_19485 IPR036318 FAD-binding, type PCMH-like superfamily BED34_19485 IPR016169 FAD-binding, type PCMH, subdomain 2 BED34_19485 IPR000644 CBS domain BED34_19485 IPR005170 Transporter-associated domain BED34_19490 IPR009491 Protein of unknown function DUF1107 BED34_19495 IPR006513 Conserved hypothetical protein CHP01626, YtfJ BED34_19500 IPR020550 Inositol monophosphatase, conserved site BED34_19500 IPR000760 Inositol monophosphatase-like BED34_19500 IPR020583 Inositol monophosphatase, metal-binding site BED34_19500 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ BED34_19505 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase BED34_19505 IPR029052 Metallo-dependent phosphatase-like BED34_19505 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type BED34_19505 IPR041827 CpdB, N-terminal metallophosphatase domain BED34_19505 IPR006179 5'-Nucleotidase/apyrase BED34_19505 IPR006146 5'-Nucleotidase, conserved site BED34_19505 IPR008334 5'-Nucleotidase, C-terminal BED34_19505 IPR036907 5'-Nucleotidase, C-terminal domain superfamily BED34_19515 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily BED34_19515 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain BED34_19515 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal BED34_19520 IPR007340 Opacity-associated protein A BED34_19520 IPR013731 Opacity-associated protein A, N-terminal BED34_19530 IPR036935 Ribosomal protein L9, N-terminal domain superfamily BED34_19530 IPR009027 Ribosomal protein L9/RNase H1, N-terminal BED34_19530 IPR020594 Ribosomal protein L9, bacteria/chloroplast BED34_19530 IPR000244 Ribosomal protein L9 BED34_19530 IPR036791 Ribosomal protein L9, C-terminal domain superfamily BED34_19530 IPR020070 Ribosomal protein L9, N-terminal BED34_19530 IPR020069 Ribosomal protein L9, C-terminal BED34_19535 IPR001648 Ribosomal protein S18 BED34_19535 IPR018275 Ribosomal protein S18, conserved site BED34_19535 IPR036870 Ribosomal protein S18 superfamily BED34_19540 IPR000424 Primosome PriB/single-strand DNA-binding BED34_19540 IPR012340 Nucleic acid-binding, OB-fold BED34_19540 IPR023646 Primosomal replication protein PriB BED34_19545 IPR020814 Ribosomal protein S6, plastid/chloroplast BED34_19545 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 BED34_19545 IPR035980 Ribosomal protein S6 superfamily BED34_19545 IPR020815 Ribosomal protein S6, conserved site BED34_19545 IPR000529 Ribosomal protein S6 BED34_19555 IPR029058 Alpha/Beta hydrolase fold BED34_19555 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain BED34_19560 IPR036275 YdgH-like superfamily BED34_19560 IPR010854 Domain of unknown function DUF1471 BED34_19560 IPR025543 Dodecin-like BED34_19565 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain BED34_19565 IPR006089 Acyl-CoA dehydrogenase, conserved site BED34_19565 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily BED34_19565 IPR034184 Putative acyl-CoA dehydrogenase AidB BED34_19565 IPR041504 Adaptive response protein AidB, N-terminal BED34_19565 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal BED34_19565 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal BED34_19570 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED34_19570 IPR003346 Transposase, IS116/IS110/IS902 BED34_19575 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BED34_19575 IPR013123 RNA 2-O ribose methyltransferase, substrate binding BED34_19575 IPR029064 50S ribosomal protein L30e-like BED34_19575 IPR001537 tRNA/rRNA methyltransferase, SpoU type BED34_19575 IPR004441 RNA methyltransferase TrmH family BED34_19575 IPR029028 Alpha/beta knot methyltransferases BED34_19575 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB BED34_19580 IPR001900 Ribonuclease II/R BED34_19580 IPR003029 S1 domain BED34_19580 IPR013223 Ribonuclease B, N-terminal OB domain BED34_19580 IPR022966 Ribonuclease II/R, conserved site BED34_19580 IPR022967 RNA-binding domain, S1 BED34_19580 IPR004476 Ribonuclease II/ribonuclease R BED34_19580 IPR012340 Nucleic acid-binding, OB-fold BED34_19580 IPR013668 Ribonuclease R winged-helix domain BED34_19580 IPR011805 Ribonuclease R BED34_19580 IPR040476 RNase II/RNase R, cold shock domain BED34_19580 IPR011129 Cold shock domain BED34_19585 IPR036390 Winged helix DNA-binding domain superfamily BED34_19585 IPR023761 Transcriptional repressor HTH, NsrR BED34_19585 IPR000944 Transcription regulator Rrf2-type BED34_19585 IPR030489 Transcription regulator Rrf2-type, conserved site BED34_19585 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_19590 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_19590 IPR001114 Adenylosuccinate synthetase BED34_19590 IPR042111 Adenylosuccinate synthetase, domain 3 BED34_19590 IPR042110 Adenylosuccinate synthetase, domain 2 BED34_19590 IPR042109 Adenylosuccinate synthetase, domain 1 BED34_19590 IPR033128 Adenylosuccinate synthase, active site BED34_19590 IPR018220 Adenylosuccinate synthase, GTP-binding site BED34_19595 IPR019201 Protein of unknown function DUF2065 BED34_19600 IPR001107 Band 7 domain BED34_19600 IPR010200 HflC BED34_19600 IPR036013 Band 7/SPFH domain superfamily BED34_19605 IPR010201 HflK BED34_19605 IPR001972 Stomatin family BED34_19605 IPR020980 Menbrane protein HflK, N-terminal BED34_19605 IPR036013 Band 7/SPFH domain superfamily BED34_19605 IPR001107 Band 7 domain BED34_19610 IPR025121 GTPase HflX, N-terminal BED34_19610 IPR042108 GTPase HflX, N-terminal domain superfamily BED34_19610 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_19610 IPR016496 GTPase HflX BED34_19610 IPR006073 GTP binding domain BED34_19610 IPR032305 GTP-binding protein, middle domain BED34_19610 IPR035647 EF-G domain III/V-like BED34_19610 IPR030394 HflX-type guanine nucleotide-binding (G) domain BED34_19615 IPR005001 RNA-binding protein Hfq BED34_19615 IPR010920 LSM domain superfamily BED34_19620 IPR018022 IPP transferase BED34_19620 IPR039657 Dimethylallyltransferase BED34_19620 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_19625 IPR037198 MutL, C-terminal domain superfamily BED34_19625 IPR042120 MutL, C-terminal domain, dimerisation subdomain BED34_19625 IPR020568 Ribosomal protein S5 domain 2-type fold BED34_19625 IPR014790 MutL, C-terminal, dimerisation BED34_19625 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms BED34_19625 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BED34_19625 IPR013507 DNA mismatch repair protein, S5 domain 2-like BED34_19625 IPR002099 DNA mismatch repair protein family, N-terminal BED34_19625 IPR020667 DNA mismatch repair protein, MutL BED34_19625 IPR014762 DNA mismatch repair, conserved site BED34_19625 IPR042121 MutL, C-terminal domain, regulatory subdomain BED34_19625 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BED34_19630 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain BED34_19635 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE BED34_19635 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_19640 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr BED34_19640 IPR017953 Carbohydrate kinase, predicted, conserved site BED34_19640 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase BED34_19640 IPR036652 YjeF N-terminal domain superfamily BED34_19640 IPR004443 YjeF N-terminal domain BED34_19640 IPR029056 Ribokinase-like BED34_19645 IPR004453 Epoxyqueuosine reductase QueG BED34_19645 IPR009051 Alpha-helical ferredoxin BED34_19645 IPR013542 Domain of unknown function DUF1730 BED34_19645 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BED34_19645 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BED34_19660 IPR013520 Exonuclease, RNase T/DNA polymerase III BED34_19660 IPR012337 Ribonuclease H-like superfamily BED34_19660 IPR036397 Ribonuclease H superfamily BED34_19660 IPR022894 Oligoribonuclease BED34_19665 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain BED34_19665 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_19665 IPR004881 Ribosome biogenesis GTPase RsgA BED34_19665 IPR010914 RsgA GTPase domain BED34_19670 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 BED34_19670 IPR033177 Phosphatidylserine decarboxylase BED34_19670 IPR003817 Phosphatidylserine decarboxylase-related BED34_19675 IPR010920 LSM domain superfamily BED34_19675 IPR023408 Mechanosensitive ion channel MscS domain superfamily BED34_19675 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 BED34_19675 IPR025692 Mechanosensitive ion channel inner membrane domain 1 BED34_19675 IPR024393 Mechanosensitive ion channel MscS, porin domain BED34_19675 IPR006686 Mechanosensitive ion channel MscS, conserved site BED34_19675 IPR006685 Mechanosensitive ion channel MscS BED34_19675 IPR011066 Mechanosensitive ion channel MscS, C-terminal BED34_19680 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) BED34_19680 IPR004525 Elongation factor P--(R)-beta-lysine ligase BED34_19680 IPR006195 Aminoacyl-tRNA synthetase, class II BED34_19680 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal BED34_19685 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit BED34_19685 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site BED34_19685 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily BED34_19685 IPR005884 Fumarate reductase, flavoprotein subunit BED34_19685 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily BED34_19685 IPR036188 FAD/NAD(P)-binding domain superfamily BED34_19685 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal BED34_19685 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain BED34_19690 IPR036010 2Fe-2S ferredoxin-like superfamily BED34_19690 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain BED34_19690 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site BED34_19690 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BED34_19690 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BED34_19690 IPR012675 Beta-grasp domain superfamily BED34_19690 IPR009051 Alpha-helical ferredoxin BED34_19690 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein BED34_19690 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal BED34_19695 IPR003510 Fumarate reductase, subunit C BED34_19695 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit BED34_19700 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit BED34_19700 IPR003418 Fumarate reductase, subunit D BED34_19705 IPR022272 Lipocalin family conserved site BED34_19705 IPR000566 Lipocalin/cytosolic fatty-acid binding domain BED34_19705 IPR002446 Lipocalin, bacterial BED34_19705 IPR012674 Calycin BED34_19705 IPR022271 Lipocalin, ApoD type BED34_19710 IPR000390 Small multidrug resistance protein family BED34_19715 IPR012556 Entericidin A/B BED34_19720 IPR015365 Elongation factor P, C-terminal BED34_19720 IPR014722 Ribosomal protein L2, domain 2 BED34_19720 IPR020599 Translation elongation factor P/YeiP BED34_19720 IPR012340 Nucleic acid-binding, OB-fold BED34_19720 IPR013185 Translation elongation factor, KOW-like BED34_19720 IPR001059 Translation elongation factor P/YeiP, central BED34_19720 IPR013852 Translation elongation factor P/YeiP, conserved site BED34_19720 IPR011768 Translation elongation factor P BED34_19720 IPR008991 Translation protein SH3-like domain superfamily BED34_19725 IPR013785 Aldolase-type TIM barrel BED34_19725 IPR007197 Radical SAM BED34_19725 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase BED34_19725 IPR022462 Lysine-2,3-aminomutase-like BED34_19730 IPR025294 Protein of unknown function DUF4156 BED34_19740 IPR027410 TCP-1-like chaperonin intermediate domain superfamily BED34_19740 IPR027413 GroEL-like equatorial domain superfamily BED34_19740 IPR027409 GroEL-like apical domain superfamily BED34_19740 IPR002423 Chaperonin Cpn60/TCP-1 family BED34_19740 IPR001844 Chaperonin Cpn60 BED34_19740 IPR018370 Chaperonin Cpn60, conserved site BED34_19745 IPR018369 Chaperonin GroES, conserved site BED34_19745 IPR037124 GroES chaperonin superfamily BED34_19745 IPR020818 GroES chaperonin family BED34_19745 IPR011032 GroES-like superfamily BED34_19750 IPR007313 FxsA cytoplasmic membrane protein BED34_19755 IPR020557 Fumarate lyase, conserved site BED34_19755 IPR004708 Aspartate ammonia-lyase BED34_19755 IPR000362 Fumarate lyase family BED34_19755 IPR022761 Fumarate lyase, N-terminal BED34_19755 IPR008948 L-Aspartase-like BED34_19755 IPR024083 Fumarase/histidase, N-terminal BED34_19755 IPR018951 Fumarase C, C-terminal BED34_19760 IPR004668 Anaerobic c4-dicarboxylate membrane transporter BED34_19765 IPR011322 Nitrogen regulatory PII-like, alpha/beta BED34_19765 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BED34_19765 IPR004323 Divalent ion tolerance protein, CutA BED34_19765 IPR023700 Divalent cation tolerance protein CutA, Enterobacteria BED34_19770 IPR017937 Thioredoxin, conserved site BED34_19770 IPR036249 Thioredoxin-like superfamily BED34_19770 IPR022910 Thiol:disulphide interchange protein DsbD BED34_19770 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily BED34_19770 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain BED34_19770 IPR035671 DsbD gamma BED34_19770 IPR003834 Cytochrome C biogenesis protein, transmembrane domain BED34_19770 IPR013766 Thioredoxin domain BED34_19775 IPR018193 Glycerate kinase, flavodoxin-like fold BED34_19775 IPR004381 Glycerate kinase BED34_19775 IPR018197 Glycerate kinase, restriction-enzyme-like fold BED34_19775 IPR036129 Glycerate kinase superfamily BED34_19780 IPR001647 DNA-binding HTH domain, TetR-type BED34_19780 IPR009057 Homeobox-like domain superfamily BED34_19780 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BED34_19790 IPR001150 Glycine radical domain BED34_19790 IPR019777 Formate C-acetyltransferase glycine radical, conserved site BED34_19790 IPR005949 Formate acetyltransferase BED34_19790 IPR004184 Pyruvate formate lyase domain BED34_19795 IPR004372 Acetate/propionate kinase BED34_19795 IPR024917 Propionate kinase BED34_19795 IPR000890 Aliphatic acid kinase, short-chain BED34_19795 IPR023865 Aliphatic acid kinase, short-chain, conserved site BED34_19800 IPR023726 Threonine/serine transporter TdcC BED34_19800 IPR004694 Hydroxy amino acid transporter BED34_19800 IPR013057 Amino acid transporter, transmembrane domain BED34_19805 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BED34_19805 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site BED34_19805 IPR001926 Pyridoxal-phosphate dependent enzyme BED34_19805 IPR005789 Threonine dehydratase, catabolic BED34_19810 IPR023404 Radical SAM, alpha/beta horseshoe BED34_19810 IPR026332 Anaerobilin synthase HutW BED34_19810 IPR006638 Elp3/MiaB/NifB BED34_19810 IPR034505 Anaerobic coproporphyrinogen-III oxidase BED34_19810 IPR007197 Radical SAM BED34_19815 IPR010413 Intracellular heme transport protein HutX-like BED34_19825 IPR019600 Hemin uptake protein HemP BED34_19830 IPR039426 Vitamin B12 transporter BtuB-like BED34_19830 IPR012910 TonB-dependent receptor, plug domain BED34_19830 IPR037066 TonB-dependent receptor, plug domain superfamily BED34_19830 IPR000531 TonB-dependent receptor-like, beta-barrel BED34_19830 IPR010916 TonB box, conserved site BED34_19830 IPR011276 TonB-dependent haem/haemoglobin receptor BED34_19830 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor BED34_19830 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BED34_19835 IPR007845 Haemin-degrading HemS/ChuX domain BED34_19840 IPR002491 ABC transporter periplasmic binding domain BED34_19845 IPR000522 ABC transporter, permease protein, BtuC-like BED34_19845 IPR037294 ABC transporter, BtuC-like BED34_19850 IPR003439 ABC transporter-like BED34_19850 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_19850 IPR003593 AAA+ ATPase domain BED34_19850 IPR017871 ABC transporter, conserved site BED34_19850 IPR015863 ABC transporter, hemin import, HmuV BED34_19865 IPR010105 TonB-dependent siderophore receptor BED34_19865 IPR012910 TonB-dependent receptor, plug domain BED34_19865 IPR000531 TonB-dependent receptor-like, beta-barrel BED34_19865 IPR039423 TonB-dependent receptor-like BED34_19865 IPR037066 TonB-dependent receptor, plug domain superfamily BED34_19865 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BED34_19865 IPR010917 TonB-dependent receptor, conserved site BED34_19880 IPR036165 YefM-like superfamily BED34_19880 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM BED34_19890 IPR003439 ABC transporter-like BED34_19890 IPR036640 ABC transporter type 1, transmembrane domain superfamily BED34_19890 IPR011527 ABC transporter type 1, transmembrane domain BED34_19890 IPR003593 AAA+ ATPase domain BED34_19890 IPR017871 ABC transporter, conserved site BED34_19890 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_19895 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BED34_19895 IPR037066 TonB-dependent receptor, plug domain superfamily BED34_19895 IPR012910 TonB-dependent receptor, plug domain BED34_19900 IPR006860 FecR protein BED34_19900 IPR032623 FecR, N-terminal BED34_19900 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component BED34_19915 IPR036868 TusA-like domain superfamily BED34_19915 IPR001455 TusA-like domain BED34_19920 IPR007272 Sulphur transport domain BED34_19925 IPR029025 Type III secretion system substrate exporter, C-terminal BED34_19925 IPR006135 Type III secretion system substrate exporter BED34_19925 IPR006307 Type III exporter system, secretion apparatus protein BsaZ BED34_19930 IPR002010 Type III secretion system inner membrane R protein BED34_19930 IPR006304 Type III secretion protein SpaR/YscT BED34_19935 IPR002191 Bacterial export protein family 3 BED34_19935 IPR006306 Type III secretion protein HrpO BED34_19940 IPR005838 Type III secretion system inner membrane P protein BED34_19940 IPR005773 Yop virulence translocation protein R BED34_19945 IPR036429 SpoA-like superfamily BED34_19945 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb BED34_19945 IPR001543 Surface presentation of antigen (SpoA) BED34_19945 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO BED34_19960 IPR013380 ATPase, type III secretion system, H+-transporting BED34_19960 IPR005714 ATPase, type III secretion system, FliI/YscN BED34_19960 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain BED34_19960 IPR003593 AAA+ ATPase domain BED34_19960 IPR040627 T3SS EscN ATPase, C-terminal BED34_19960 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_19965 IPR042193 FHIPEP, domain 3 BED34_19965 IPR042196 FHIPEP, domain 4 BED34_19965 IPR025505 FHIPEP conserved site BED34_19965 IPR001712 Type III secretion system FHIPEP BED34_19965 IPR006302 Type III secretion protein HrcV BED34_19970 IPR017033 Type III secretion system apparatus protein SsaM BED34_19975 IPR010812 Hypersensitivity response secretion-like, HrpJ BED34_19975 IPR013351 Type III secretion system effector delivery regulator TyeA-related BED34_19990 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ BED34_19990 IPR006182 Secretory protein YscJ/FliF BED34_20010 IPR018062 HTH domain AraC-type, conserved site BED34_20010 IPR018060 DNA binding HTH domain, AraC-type BED34_20010 IPR009057 Homeobox-like domain superfamily BED34_20010 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like BED34_20035 IPR006972 Secretion system effector C, SseC-like BED34_20080 IPR001789 Signal transduction response regulator, receiver domain BED34_20080 IPR000792 Transcription regulator LuxR, C-terminal BED34_20080 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_20080 IPR011006 CheY-like superfamily BED34_20080 IPR016032 Signal transduction response regulator, C-terminal effector BED34_20085 IPR034703 Proton/glutamate-aspartate symporter GltP BED34_20085 IPR036458 Sodium:dicarboxylate symporter superfamily BED34_20085 IPR033380 Glutamate-aspartate symport protein GltP/GltT BED34_20085 IPR001991 Sodium:dicarboxylate symporter BED34_20085 IPR018107 Sodium:dicarboxylate symporter, conserved site BED34_20090 IPR011904 Acetate-CoA ligase BED34_20090 IPR025110 AMP-binding enzyme, C-terminal domain BED34_20090 IPR042099 AMP-dependent synthetase-like superfamily BED34_20090 IPR000873 AMP-dependent synthetase/ligase BED34_20090 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain BED34_20090 IPR020845 AMP-binding, conserved site BED34_20095 IPR007436 Protein of unknown function DUF485 BED34_20100 IPR038377 Sodium/glucose symporter superfamily BED34_20100 IPR014083 Cation/acetate symporter ActP BED34_20100 IPR001734 Sodium/solute symporter BED34_20100 IPR018212 Sodium/solute symporter, conserved site BED34_20145 IPR024051 AICAR transformylase, duplicated domain superfamily BED34_20145 IPR002695 Bifunctional purine biosynthesis protein PurH-like BED34_20145 IPR011607 Methylglyoxal synthase-like domain BED34_20145 IPR036914 Methylglyoxal synthase-like domain superfamily BED34_20145 IPR016193 Cytidine deaminase-like BED34_20150 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily BED34_20150 IPR020559 Phosphoribosylglycinamide synthetase, conserved site BED34_20150 IPR020560 Phosphoribosylglycinamide synthetase, C-domain BED34_20150 IPR000115 Phosphoribosylglycinamide synthetase BED34_20150 IPR016185 Pre-ATP-grasp domain superfamily BED34_20150 IPR013815 ATP-grasp fold, subdomain 1 BED34_20150 IPR011761 ATP-grasp fold BED34_20150 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal BED34_20150 IPR011054 Rudiment single hybrid motif BED34_20150 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BED34_20155 IPR016500 Uncharacterised conserved protein UCP006993 BED34_20155 IPR010858 Protein of unknown function DUF1481 BED34_20160 IPR020816 Histone-like DNA-binding protein, conserved site BED34_20160 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily BED34_20160 IPR000119 Histone-like DNA-binding protein BED34_20165 IPR007338 Protein of unknown function DUF416 BED34_20165 IPR023381 YP001051499.1-like domain superfamily BED34_20170 IPR007581 Endonuclease V BED34_20175 IPR006361 Uroporphyrinogen decarboxylase HemE BED34_20175 IPR000257 Uroporphyrinogen decarboxylase (URO-D) BED34_20175 IPR038071 UROD/MetE-like superfamily BED34_20180 IPR022925 NADH pyrophosphatase NudC BED34_20180 IPR015797 NUDIX hydrolase-like domain superfamily BED34_20180 IPR020084 NUDIX hydrolase, conserved site BED34_20180 IPR000086 NUDIX hydrolase domain BED34_20180 IPR015376 Zinc ribbon, NADH pyrophosphatase BED34_20185 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ BED34_20185 IPR038309 Rsd/AlgQ superfamily BED34_20185 IPR023785 Regulator of RNA polymerase sigma(70) subunit, Rsd BED34_20190 IPR038521 ThiC/Bza superfamily BED34_20190 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B BED34_20190 IPR037509 Phosphomethylpyrimidine synthase BED34_20190 IPR025747 ThiC-associated domain BED34_20195 IPR013785 Aldolase-type TIM barrel BED34_20195 IPR036206 Thiamin phosphate synthase superfamily BED34_20195 IPR022998 Thiamine phosphate synthase/TenI BED34_20195 IPR034291 Thiamine phosphate synthase BED34_20200 IPR012731 Thiazole biosynthesis adenylyltransferase ThiF BED34_20200 IPR000594 THIF-type NAD/FAD binding fold BED34_20200 IPR035985 Ubiquitin-activating enzyme BED34_20205 IPR003749 Sulfur carrier ThiS/MoaD-like BED34_20205 IPR010035 ThiS, thiamine-biosynthesis BED34_20205 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp BED34_20205 IPR012675 Beta-grasp domain superfamily BED34_20210 IPR013785 Aldolase-type TIM barrel BED34_20210 IPR033983 Thiazole synthase ThiG BED34_20210 IPR008867 Thiazole synthase BED34_20215 IPR007197 Radical SAM BED34_20215 IPR034428 ThiH/NocL/HydG-like BED34_20215 IPR012726 Thiazole biosynthesis ThiH BED34_20215 IPR013785 Aldolase-type TIM barrel BED34_20215 IPR010722 Biotin and thiamin synthesis-associated domain BED34_20220 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED34_20220 IPR003346 Transposase, IS116/IS110/IS902 BED34_20225 IPR000722 RNA polymerase, alpha subunit BED34_20225 IPR012754 DNA-directed RNA polymerase, subunit beta-prime BED34_20225 IPR007066 RNA polymerase Rpb1, domain 3 BED34_20225 IPR042102 RNA polymerase Rpb1, domain 3 superfamily BED34_20225 IPR006592 RNA polymerase, N-terminal BED34_20225 IPR007083 RNA polymerase Rpb1, domain 4 BED34_20225 IPR007081 RNA polymerase Rpb1, domain 5 BED34_20225 IPR007080 RNA polymerase Rpb1, domain 1 BED34_20225 IPR038120 RNA polymerase Rpb1, funnel domain superfamily BED34_20230 IPR007642 RNA polymerase Rpb2, domain 2 BED34_20230 IPR007644 RNA polymerase, beta subunit, protrusion BED34_20230 IPR007645 RNA polymerase Rpb2, domain 3 BED34_20230 IPR015712 DNA-directed RNA polymerase, subunit 2 BED34_20230 IPR007641 RNA polymerase Rpb2, domain 7 BED34_20230 IPR014724 RNA polymerase Rpb2, OB-fold BED34_20230 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain BED34_20230 IPR007121 RNA polymerase, beta subunit, conserved site BED34_20230 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type BED34_20230 IPR037034 RNA polymerase Rpb2, domain 2 superfamily BED34_20230 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain BED34_20230 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily BED34_20235 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily BED34_20235 IPR008932 Ribosomal protein L7/L12, oligomerisation BED34_20235 IPR000206 Ribosomal protein L7/L12 BED34_20235 IPR013823 Ribosomal protein L7/L12, C-terminal BED34_20235 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like BED34_20240 IPR001790 Ribosomal protein L10P BED34_20240 IPR022973 Ribosomal protein L10 BED34_20240 IPR002363 Ribosomal protein L10, eubacterial, conserved site BED34_20245 IPR002143 Ribosomal protein L1 BED34_20245 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich BED34_20245 IPR005878 Ribosomal protein L1, bacterial-type BED34_20245 IPR023674 Ribosomal protein L1-like BED34_20245 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein BED34_20245 IPR023673 Ribosomal protein L1, conserved site BED34_20250 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily BED34_20250 IPR000911 Ribosomal protein L11/L12 BED34_20250 IPR020785 Ribosomal protein L11, conserved site BED34_20250 IPR036769 Ribosomal protein L11, C-terminal domain superfamily BED34_20250 IPR006519 Ribosomal protein L11, bacterial-type BED34_20250 IPR020783 Ribosomal protein L11, C-terminal BED34_20250 IPR020784 Ribosomal protein L11, N-terminal BED34_20255 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site BED34_20255 IPR008991 Translation protein SH3-like domain superfamily BED34_20255 IPR014722 Ribosomal protein L2, domain 2 BED34_20255 IPR036735 NusG, N-terminal domain superfamily BED34_20255 IPR005824 KOW BED34_20255 IPR006645 NusG, N-terminal BED34_20255 IPR001062 Transcription antitermination protein, NusG BED34_20260 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit BED34_20260 IPR038379 SecE superfamily BED34_20260 IPR005807 SecE subunit of protein translocation complex, bacterial-like BED34_20265 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain BED34_20265 IPR004161 Translation elongation factor EFTu-like, domain 2 BED34_20265 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle BED34_20265 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal BED34_20265 IPR033720 Elongation factor Tu, domain 2 BED34_20265 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal BED34_20265 IPR009000 Translation protein, beta-barrel domain superfamily BED34_20265 IPR000795 Transcription factor, GTP-binding domain BED34_20265 IPR005225 Small GTP-binding protein domain BED34_20265 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_20265 IPR031157 Tr-type G domain, conserved site BED34_20300 IPR004566 Pantothenate kinase BED34_20300 IPR006083 Phosphoribulokinase/uridine kinase BED34_20300 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_20305 IPR036390 Winged helix DNA-binding domain superfamily BED34_20305 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_20305 IPR008988 Transcriptional repressor, C-terminal BED34_20305 IPR013196 Helix-turn-helix, type 11 BED34_20305 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain BED34_20305 IPR003142 Biotin protein ligase, C-terminal BED34_20305 IPR004409 Biotin operon repressor, helix-turn-helix domain BED34_20305 IPR004408 Biotin--acetyl-CoA-carboxylase ligase BED34_20305 IPR030855 Bifunctional ligase/repressor BirA BED34_20310 IPR016166 FAD-binding domain, PCMH-type BED34_20310 IPR036318 FAD-binding, type PCMH-like superfamily BED34_20310 IPR016167 FAD-binding, type PCMH, subdomain 1 BED34_20310 IPR016169 FAD-binding, type PCMH, subdomain 2 BED34_20310 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily BED34_20310 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal BED34_20310 IPR006094 FAD linked oxidase, N-terminal BED34_20310 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase BED34_20315 IPR003346 Transposase, IS116/IS110/IS902 BED34_20315 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED34_20345 IPR008254 Flavodoxin/nitric oxide synthase BED34_20345 IPR001226 Flavodoxin, conserved site BED34_20345 IPR026816 Flavodoxin domain BED34_20345 IPR029039 Flavoprotein-like superfamily BED34_20350 IPR003445 Cation transporter BED34_20350 IPR004772 TrkH potassium transport family BED34_20355 IPR015796 Impact family, bacterial/archaeal BED34_20355 IPR023582 Impact family BED34_20355 IPR035647 EF-G domain III/V-like BED34_20355 IPR036956 Impact, N-terminal domain superfamily BED34_20355 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site BED34_20355 IPR020568 Ribosomal protein S5 domain 2-type fold BED34_20355 IPR001498 Impact, N-terminal BED34_20355 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal BED34_20360 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site BED34_20360 IPR022846 Xaa-Pro dipeptidase BED34_20360 IPR000994 Peptidase M24 BED34_20360 IPR036005 Creatinase/aminopeptidase-like BED34_20360 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal BED34_20365 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding BED34_20365 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal BED34_20365 IPR029045 ClpP/crotonase-like domain superfamily BED34_20365 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site BED34_20365 IPR001753 Enoyl-CoA hydratase/isomerase BED34_20365 IPR012799 Fatty oxidation complex, alpha subunit FadB BED34_20365 IPR036291 NAD(P)-binding domain superfamily BED34_20365 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site BED34_20365 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BED34_20370 IPR020615 Thiolase, acyl-enzyme intermediate active site BED34_20370 IPR016039 Thiolase-like BED34_20370 IPR020610 Thiolase, active site BED34_20370 IPR020617 Thiolase, C-terminal BED34_20370 IPR020613 Thiolase, conserved site BED34_20370 IPR012805 Acetyl-CoA C-acyltransferase FadA BED34_20370 IPR002155 Thiolase BED34_20370 IPR020616 Thiolase, N-terminal BED34_20375 IPR017927 FAD-binding domain, ferredoxin reductase-type BED34_20375 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain BED34_20375 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BED34_20375 IPR017938 Riboflavin synthase-like beta-barrel BED34_20375 IPR001433 Oxidoreductase FAD/NAD(P)-binding BED34_20380 IPR023677 UbiD decarboxylyase, bacteria BED34_20380 IPR002830 UbiD decarboxylyase family BED34_20385 IPR006645 NusG, N-terminal BED34_20385 IPR036735 NusG, N-terminal domain superfamily BED34_20385 IPR010215 Transcription antitermination protein RfaH BED34_20390 IPR013785 Aldolase-type TIM barrel BED34_20390 IPR030656 Delta-aminolevulinic acid dehydratase, active site BED34_20390 IPR001731 Delta-aminolevulinic acid dehydratase BED34_20395 IPR001130 TatD family BED34_20395 IPR018228 Deoxyribonuclease, TatD-related, conserved site BED34_20395 IPR024918 3'-5' ssDNA/RNA exonuclease TatD BED34_20395 IPR032466 Metal-dependent hydrolase BED34_20400 IPR002033 Sec-independent periplasmic protein translocase TatC BED34_20400 IPR019820 Sec-independent periplasmic protein translocase, conserved site BED34_20405 IPR018448 Twin-arginine translocation protein TatB BED34_20410 IPR003369 Sec-independent protein translocase protein TatA/B/E BED34_20410 IPR006312 Sec-independent protein translocase protein TatA/E BED34_20415 IPR011009 Protein kinase-like domain superfamily BED34_20415 IPR004147 UbiB domain BED34_20415 IPR010232 Probable protein kinase UbiB BED34_20420 IPR038989 Ubiquinone biosynthesis protein UbiJ BED34_20420 IPR036527 SCP2 sterol-binding domain superfamily BED34_20420 IPR003033 SCP2 sterol-binding domain BED34_20425 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED34_20425 IPR023576 UbiE/COQ5 methyltransferase, conserved site BED34_20425 IPR004033 UbiE/COQ5 methyltransferase BED34_20440 IPR025299 CstA, C-terminal domain BED34_20440 IPR003706 CstA, N-terminal domain BED34_20450 IPR018016 Nucleoside phosphorylase, conserved site BED34_20450 IPR010058 Uridine phosphorylase BED34_20450 IPR035994 Nucleoside phosphorylase superfamily BED34_20450 IPR000845 Nucleoside phosphorylase domain BED34_20455 IPR002925 Dienelactone hydrolase BED34_20455 IPR029058 Alpha/Beta hydrolase fold BED34_20460 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal BED34_20460 IPR006276 Cobalamin-independent methionine synthase BED34_20460 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal BED34_20460 IPR038071 UROD/MetE-like superfamily BED34_20465 IPR005119 LysR, substrate-binding BED34_20465 IPR037406 HTH-type transcriptional regulator MetR, PBP2 domain BED34_20465 IPR000847 Transcription regulator HTH, LysR BED34_20465 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_20465 IPR036390 Winged helix DNA-binding domain superfamily BED34_20470 IPR004779 Carboxylate/Amino Acid/Amine Transporter BED34_20470 IPR000620 EamA domain BED34_20475 IPR004776 Membrane transport protein BED34_20480 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily BED34_20480 IPR030395 Glycerophosphodiester phosphodiesterase domain BED34_20485 IPR017922 sn-Glycerol-3-phosphate import ATP-binding protein UgpC BED34_20485 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_20485 IPR040582 MalK, OB fold domain BED34_20485 IPR008995 Molybdate/tungstate binding, C-terminal BED34_20485 IPR003439 ABC transporter-like BED34_20485 IPR003593 AAA+ ATPase domain BED34_20485 IPR017871 ABC transporter, conserved site BED34_20490 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED34_20490 IPR035906 MetI-like superfamily BED34_20490 IPR030165 sn-Glycerol-3-phosphate transport system permease protein UgpE BED34_20495 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED34_20495 IPR035906 MetI-like superfamily BED34_20500 IPR006061 Solute-binding family 1, conserved site BED34_20500 IPR006059 Bacterial extracellular solute-binding protein BED34_20535 IPR003593 AAA+ ATPase domain BED34_20535 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_20535 IPR017871 ABC transporter, conserved site BED34_20535 IPR003439 ABC transporter-like BED34_20535 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein BED34_20540 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_20540 IPR003439 ABC transporter-like BED34_20540 IPR017871 ABC transporter, conserved site BED34_20540 IPR003593 AAA+ ATPase domain BED34_20540 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal BED34_20545 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal BED34_20545 IPR001851 ABC transporter, permease BED34_20550 IPR001851 ABC transporter, permease BED34_20555 IPR028081 Leucine-binding protein domain BED34_20555 IPR000709 Leu/Ile/Val-binding protein BED34_20555 IPR028082 Periplasmic binding protein-like I BED34_20560 IPR040448 PanZ, acetyltransferase (GNAT) domain BED34_20560 IPR032900 PanD regulatory factor PanZ BED34_20560 IPR016181 Acyl-CoA N-acyltransferase BED34_20560 IPR000182 GNAT domain BED34_20575 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_20575 IPR013324 RNA polymerase sigma factor, region 3/4-like BED34_20575 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria BED34_20575 IPR013325 RNA polymerase sigma factor, region 2 BED34_20575 IPR007630 RNA polymerase sigma-70 region 4 BED34_20575 IPR000943 RNA polymerase sigma-70 BED34_20575 IPR009042 RNA polymerase sigma-70 region 1.2 BED34_20575 IPR014284 RNA polymerase sigma-70 like domain BED34_20575 IPR007627 RNA polymerase sigma-70 region 2 BED34_20580 IPR003838 ABC transporter permease protein domain BED34_20580 IPR004513 Cell division protein FtsX BED34_20580 IPR040690 FtsX, extracellular domain BED34_20585 IPR003593 AAA+ ATPase domain BED34_20585 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_20585 IPR005286 Cell division protein FtsE, ATP-binding BED34_20585 IPR017871 ABC transporter, conserved site BED34_20585 IPR003439 ABC transporter-like BED34_20590 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_20590 IPR013822 Signal recognition particle SRP54, helical bundle BED34_20590 IPR004390 Signal-recognition particle receptor FtsY BED34_20590 IPR036225 SRP/SRP receptor, N-terminal BED34_20590 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain BED34_20590 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily BED34_20590 IPR003593 AAA+ ATPase domain BED34_20595 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED34_20595 IPR004398 RNA methyltransferase, RsmD BED34_20595 IPR002052 DNA methylase, N-6 adenine-specific, conserved site BED34_20600 IPR009525 Protein of unknown function DUF1145 BED34_20615 IPR012506 YhhN-like BED34_20620 IPR008250 P-type ATPase, A domain superfamily BED34_20620 IPR036412 HAD-like superfamily BED34_20620 IPR018303 P-type ATPase, phosphorylation site BED34_20620 IPR023299 P-type ATPase, cytoplasmic domain N BED34_20620 IPR023214 HAD superfamily BED34_20620 IPR017969 Heavy-metal-associated, conserved site BED34_20620 IPR006121 Heavy metal-associated domain, HMA BED34_20620 IPR036163 Heavy metal-associated domain superfamily BED34_20620 IPR027256 P-type ATPase, subfamily IB BED34_20620 IPR001757 P-type ATPase BED34_20620 IPR023298 P-type ATPase, transmembrane domain superfamily BED34_20625 IPR036868 TusA-like domain superfamily BED34_20625 IPR022931 Sulfur carrier protein TusA BED34_20625 IPR001455 TusA-like domain BED34_20630 IPR003744 Queuosine precursor transporter BED34_20635 IPR014894 Protein DcrB BED34_20635 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich BED34_20640 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit BED34_20640 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BED34_20640 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BED34_20640 IPR004017 Cysteine-rich domain BED34_20640 IPR009051 Alpha-helical ferredoxin BED34_20645 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain BED34_20645 IPR036188 FAD/NAD(P)-binding domain superfamily BED34_20645 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit BED34_20650 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit BED34_20650 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase BED34_20650 IPR036188 FAD/NAD(P)-binding domain superfamily BED34_20650 IPR006076 FAD dependent oxidoreductase BED34_20650 IPR007419 BFD-like [2Fe-2S]-binding domain BED34_20650 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily BED34_20655 IPR000849 Sugar phosphate transporter BED34_20655 IPR036259 MFS transporter superfamily BED34_20655 IPR020846 Major facilitator superfamily domain BED34_20655 IPR021159 Glycerate/sugar phosphate transporter, conserved site BED34_20655 IPR011701 Major facilitator superfamily BED34_20655 IPR005267 Glycerol-3-phosphate transporter BED34_20660 IPR030395 Glycerophosphodiester phosphodiesterase domain BED34_20660 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily BED34_20665 IPR036412 HAD-like superfamily BED34_20665 IPR000150 Cof family BED34_20665 IPR023214 HAD superfamily BED34_20665 IPR006379 HAD-superfamily hydrolase, subfamily IIB BED34_20670 IPR029058 Alpha/Beta hydrolase fold BED34_20670 IPR022742 Serine aminopeptidase, S33 BED34_20675 IPR004778 Homoserine/Threonine efflux protein BED34_20675 IPR001123 Amino acid exporter protein, LeuE-type BED34_20680 IPR001123 Amino acid exporter protein, LeuE-type BED34_20680 IPR004778 Homoserine/Threonine efflux protein BED34_20685 IPR011545 DEAD/DEAH box helicase domain BED34_20685 IPR004589 DNA helicase, ATP-dependent, RecQ type BED34_20685 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial BED34_20685 IPR014001 Helicase superfamily 1/2, ATP-binding domain BED34_20685 IPR018982 RQC domain BED34_20685 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_20685 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_20685 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain BED34_20685 IPR001650 Helicase, C-terminal BED34_20685 IPR010997 HRDC-like superfamily BED34_20685 IPR002121 HRDC domain BED34_20690 IPR003187 Phospholipase A1 BED34_20690 IPR036541 Phospholipase A1 superfamily BED34_20695 IPR029069 HotDog domain superfamily BED34_20695 IPR003736 Phenylacetic acid degradation-related domain BED34_20695 IPR006683 Thioesterase domain BED34_20700 IPR000620 EamA domain BED34_20700 IPR004626 RarD protein BED34_20705 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB BED34_20705 IPR004488 Magnesium/cobalt transport protein CorA BED34_20710 IPR009215 TIM-barrel domain, IGPS-like BED34_20710 IPR013785 Aldolase-type TIM barrel BED34_20710 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily BED34_20715 IPR008322 Uncharacterised protein family UPF0261 BED34_20725 IPR000212 DNA helicase, UvrD/REP type BED34_20725 IPR013986 DExx box DNA helicase domain superfamily BED34_20725 IPR005753 DNA helicase, ATP-dependent, UvrD type BED34_20725 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_20725 IPR034739 UvrD/AddA helicase, N-terminal BED34_20725 IPR014017 UvrD-like DNA helicase, C-terminal BED34_20725 IPR014016 UvrD-like helicase, ATP-binding domain BED34_20730 IPR023214 HAD superfamily BED34_20730 IPR041492 Haloacid dehalogenase-like hydrolase BED34_20730 IPR006439 HAD hydrolase, subfamily IA BED34_20730 IPR036412 HAD-like superfamily BED34_20735 IPR002104 Integrase, catalytic domain BED34_20735 IPR011931 Tyrosine recombinase XerC BED34_20735 IPR023009 Tyrosine recombinase XerC/XerD BED34_20735 IPR011010 DNA breaking-rejoining enzyme, catalytic core BED34_20735 IPR004107 Integrase, SAM-like, N-terminal BED34_20735 IPR013762 Integrase-like, catalytic domain superfamily BED34_20735 IPR010998 Integrase/recombinase, N-terminal BED34_20740 IPR029016 GAF-like domain superfamily BED34_20740 IPR007435 Protein of unknown function DUF484 BED34_20745 IPR001653 Diaminopimelate epimerase, DapF BED34_20745 IPR018510 Diaminopimelate epimerase, active site BED34_20750 IPR032831 Prokaryotic lipoprotein-attachment site BED34_20755 IPR020895 Frataxin conserved site BED34_20755 IPR002908 Frataxin/CyaY BED34_20755 IPR036524 Frataxin/CyaY superfamily BED34_20765 IPR024686 Adenylate cyclase class-I, conserved site BED34_20765 IPR024685 Adenylate cyclase class-I, N-terminal domain BED34_20765 IPR000274 Adenylate cyclase, class-I BED34_20770 IPR000860 Porphobilinogen deaminase BED34_20770 IPR022418 Porphobilinogen deaminase, C-terminal BED34_20770 IPR022417 Porphobilinogen deaminase, N-terminal BED34_20770 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily BED34_20770 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site BED34_20775 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily BED34_20775 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase BED34_20775 IPR039793 Uroporphyrinogen-III synthase BED34_20780 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX BED34_20785 IPR019734 Tetratricopeptide repeat BED34_20785 IPR011990 Tetratricopeptide-like helical domain superfamily BED34_20785 IPR013026 Tetratricopeptide repeat-containing domain BED34_20785 IPR010817 HemY, N-terminal BED34_20785 IPR005254 Heme biosynthesis-associated TPR protein BED34_20785 IPR013105 Tetratricopeptide repeat 2 BED34_20790 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED34_20790 IPR003346 Transposase, IS116/IS110/IS902 BED34_20820 IPR004629 Glycosyl transferase WecB/TagA/CpsF BED34_20820 IPR023085 UDP-N-acetyl-D-mannosaminuronic acid transferase BED34_20825 IPR010691 Probable ECA polymerase WzyE BED34_20830 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase BED34_20835 IPR032896 Lipid III flippase WzxE BED34_20835 IPR002797 Polysaccharide biosynthesis protein BED34_20840 IPR012749 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE-like BED34_20840 IPR015424 Pyridoxal phosphate-dependent transferase BED34_20840 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase BED34_20840 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED34_20840 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED34_20840 IPR032894 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE BED34_20845 IPR012752 dTDP-fucosamine acetyltransferase WecD BED34_20845 IPR016181 Acyl-CoA N-acyltransferase BED34_20845 IPR002110 Ankyrin repeat BED34_20845 IPR000182 GNAT domain BED34_20845 IPR020683 Ankyrin repeat-containing domain BED34_20850 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form BED34_20850 IPR005835 Nucleotidyl transferase domain BED34_20850 IPR029044 Nucleotide-diphospho-sugar transferases BED34_20855 IPR005888 dTDP-glucose 4,6-dehydratase BED34_20855 IPR036291 NAD(P)-binding domain superfamily BED34_20855 IPR016040 NAD(P)-binding domain BED34_20860 IPR032891 UDP-N-acetyl-D-mannosamine dehydrogenase WecC BED34_20860 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase BED34_20860 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BED34_20860 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation BED34_20860 IPR036291 NAD(P)-binding domain superfamily BED34_20860 IPR017476 UDP-glucose/GDP-mannose dehydrogenase BED34_20860 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal BED34_20860 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily BED34_20860 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal BED34_20865 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain BED34_20865 IPR032892 UDP-N-acetylglucosamine 2-epimerase WecB BED34_20865 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like BED34_20870 IPR003856 Polysaccharide chain length determinant N-terminal domain BED34_20870 IPR032895 ECA polysaccharide chain length modulation protein WzzE BED34_20875 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase BED34_20875 IPR000715 Glycosyl transferase, family 4 BED34_20880 IPR003346 Transposase, IS116/IS110/IS902 BED34_20880 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED34_20885 IPR041703 Transcription termination factor Rho, ATP binding domain BED34_20885 IPR003593 AAA+ ATPase domain BED34_20885 IPR011129 Cold shock domain BED34_20885 IPR004665 Transcription termination factor Rho BED34_20885 IPR011113 Rho termination factor, RNA-binding domain BED34_20885 IPR036269 Rho termination factor, N-terminal domain superfamily BED34_20885 IPR011112 Rho termination factor, N-terminal BED34_20885 IPR012340 Nucleic acid-binding, OB-fold BED34_20885 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_20885 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain BED34_20890 IPR013766 Thioredoxin domain BED34_20890 IPR017937 Thioredoxin, conserved site BED34_20890 IPR036249 Thioredoxin-like superfamily BED34_20890 IPR005746 Thioredoxin BED34_20895 IPR023554 ATP-dependent RNA helicase RhlB type BED34_20895 IPR014014 RNA helicase, DEAD-box type, Q motif BED34_20895 IPR011545 DEAD/DEAH box helicase domain BED34_20895 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site BED34_20895 IPR014001 Helicase superfamily 1/2, ATP-binding domain BED34_20895 IPR001650 Helicase, C-terminal BED34_20895 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_20900 IPR030673 Pyrophosphatase, GppA/Ppx-type BED34_20900 IPR003695 Ppx/GppA phosphatase BED34_20900 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase BED34_20900 IPR022371 Exopolyphosphatase BED34_20905 IPR003961 Fibronectin type III BED34_20905 IPR012334 Pectin lyase fold BED34_20905 IPR011050 Pectin lyase fold/virulence factor BED34_20905 IPR036116 Fibronectin type III superfamily BED34_20905 IPR013783 Immunoglobulin-like fold BED34_20905 IPR000743 Glycoside hydrolase, family 28 BED34_20910 IPR005752 ATP-dependent DNA helicase Rep BED34_20910 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_20910 IPR014016 UvrD-like helicase, ATP-binding domain BED34_20910 IPR014017 UvrD-like DNA helicase, C-terminal BED34_20910 IPR013986 DExx box DNA helicase domain superfamily BED34_20910 IPR000212 DNA helicase, UvrD/REP type BED34_20910 IPR034739 UvrD/AddA helicase, N-terminal BED34_20915 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type BED34_20915 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site BED34_20925 IPR009057 Homeobox-like domain superfamily BED34_20925 IPR012337 Ribonuclease H-like superfamily BED34_20925 IPR038717 Tc1-like transposase, DDE domain BED34_20925 IPR025959 Winged helix-turn helix domain BED34_20945 IPR025758 Fic/DOC N-terminal BED34_20945 IPR003812 Fido domain BED34_20945 IPR036597 Fido-like domain superfamily BED34_20945 IPR040198 Fido domain-containing protein BED34_20945 IPR026287 Protein adenylyltransferase SoFic-like BED34_20980 IPR038488 Integrase, DNA-binding domain superfamily BED34_20980 IPR011010 DNA breaking-rejoining enzyme, catalytic core BED34_20980 IPR002104 Integrase, catalytic domain BED34_20980 IPR025166 Integrase, DNA-binding domain BED34_20980 IPR004107 Integrase, SAM-like, N-terminal BED34_20980 IPR013762 Integrase-like, catalytic domain superfamily BED34_20980 IPR010998 Integrase/recombinase, N-terminal BED34_20985 IPR018062 HTH domain AraC-type, conserved site BED34_20985 IPR018060 DNA binding HTH domain, AraC-type BED34_20985 IPR009057 Homeobox-like domain superfamily BED34_20985 IPR028082 Periplasmic binding protein-like I BED34_20985 IPR020449 Transcription regulator HTH, AraC- type BED34_20990 IPR001851 ABC transporter, permease BED34_20995 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_20995 IPR017871 ABC transporter, conserved site BED34_20995 IPR003439 ABC transporter-like BED34_20995 IPR003593 AAA+ ATPase domain BED34_20995 IPR013455 ABC transporter, D-xylose, ATP-binding protein BED34_21000 IPR028082 Periplasmic binding protein-like I BED34_21000 IPR025997 Periplasmic binding protein BED34_21000 IPR013456 D-xylose ABC transporter, substrate-binding protein BED34_21005 IPR013452 Xylose isomerase, bacterial-type BED34_21005 IPR001998 Xylose isomerase BED34_21005 IPR036237 Xylose isomerase-like superfamily BED34_21010 IPR018485 Carbohydrate kinase, FGGY, C-terminal BED34_21010 IPR000577 Carbohydrate kinase, FGGY BED34_21010 IPR018483 Carbohydrate kinase, FGGY, conserved site BED34_21010 IPR018484 Carbohydrate kinase, FGGY, N-terminal BED34_21010 IPR006000 Xylulokinase BED34_21015 IPR016148 Pili assembly chaperone, C-terminal BED34_21015 IPR001829 Pili assembly chaperone, bacterial BED34_21015 IPR036316 Pili assembly chaperone, C-terminal domain superfamily BED34_21015 IPR008962 PapD-like superfamily BED34_21015 IPR018046 Pili assembly chaperone, conserved site BED34_21015 IPR016147 Pili assembly chaperone, N-terminal BED34_21015 IPR013783 Immunoglobulin-like fold BED34_21030 IPR002656 Acyltransferase 3 BED34_21030 IPR032905 O-acetyltransferase WecH BED34_21035 IPR036259 MFS transporter superfamily BED34_21035 IPR020846 Major facilitator superfamily domain BED34_21035 IPR011701 Major facilitator superfamily BED34_21040 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_21040 IPR004535 Translation elongation factor, selenocysteine-specific BED34_21040 IPR031157 Tr-type G domain, conserved site BED34_21040 IPR036390 Winged helix DNA-binding domain superfamily BED34_21040 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_21040 IPR015190 Translation elongation factor SelB, winged helix, type 2 BED34_21040 IPR009000 Translation protein, beta-barrel domain superfamily BED34_21040 IPR004161 Translation elongation factor EFTu-like, domain 2 BED34_21040 IPR000795 Transcription factor, GTP-binding domain BED34_21040 IPR015191 Translation elongation factor SelB, winged helix, type 3 BED34_21040 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal BED34_21045 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED34_21045 IPR004534 L-seryl-tRNA(Sec) selenium transferase BED34_21045 IPR018319 L-seryl-tRNA selenium transferase-like BED34_21045 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain BED34_21045 IPR015424 Pyridoxal phosphate-dependent transferase BED34_21050 IPR024064 FdhE-like superfamily BED34_21050 IPR006452 Formate dehydrogenase accessory protein BED34_21055 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase BED34_21055 IPR006471 Formate dehydrogenase, gamma subunit BED34_21055 IPR016174 Di-haem cytochrome, transmembrane BED34_21060 IPR014603 Formate dehydrogenase iron-sulphur subunit BED34_21060 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BED34_21060 IPR015246 Formate dehydrogenase, transmembrane BED34_21060 IPR038384 Formate dehydrogenase, C-terminal domain superfamily BED34_21060 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria BED34_21060 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BED34_21065 IPR006656 Molybdopterin oxidoreductase BED34_21065 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site BED34_21065 IPR006657 Molybdopterin dinucleotide-binding domain BED34_21065 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site BED34_21065 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain BED34_21065 IPR006311 Twin-arginine translocation pathway, signal sequence BED34_21065 IPR006443 Formate dehydrogenase-N, alpha subunit BED34_21065 IPR009010 Aspartate decarboxylase-like domain superfamily BED34_21070 IPR009010 Aspartate decarboxylase-like domain superfamily BED34_21070 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site BED34_21070 IPR006657 Molybdopterin dinucleotide-binding domain BED34_21070 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site BED34_21070 IPR006443 Formate dehydrogenase-N, alpha subunit BED34_21070 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain BED34_21070 IPR006656 Molybdopterin oxidoreductase BED34_21070 IPR006311 Twin-arginine translocation pathway, signal sequence BED34_21075 IPR016193 Cytidine deaminase-like BED34_21075 IPR003786 Sulfur carrier protein FdhD BED34_21080 IPR001189 Manganese/iron superoxide dismutase BED34_21080 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily BED34_21080 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily BED34_21080 IPR019831 Manganese/iron superoxide dismutase, N-terminal BED34_21080 IPR019832 Manganese/iron superoxide dismutase, C-terminal BED34_21080 IPR019833 Manganese/iron superoxide dismutase, binding site BED34_21085 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily BED34_21085 IPR004090 Chemotaxis methyl-accepting receptor BED34_21085 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding BED34_21085 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site BED34_21085 IPR003660 HAMP domain BED34_21085 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BED34_21090 IPR011037 Pyruvate kinase-like, insert domain superfamily BED34_21090 IPR005302 Molybdenum cofactor sulfurase, C-terminal BED34_21090 IPR005163 3-alpha domain BED34_21095 IPR002716 PIN domain BED34_21095 IPR029060 PIN-like domain superfamily BED34_21095 IPR022907 VapC family BED34_21100 IPR007159 SpoVT-AbrB domain BED34_21100 IPR037914 SpoVT-AbrB domain superfamily BED34_21105 IPR021230 Protein of unknown function DUF2810 BED34_21110 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_21110 IPR000524 Transcription regulator HTH, GntR BED34_21110 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED34_21110 IPR015424 Pyridoxal phosphate-dependent transferase BED34_21110 IPR004839 Aminotransferase, class I/classII BED34_21110 IPR036390 Winged helix DNA-binding domain superfamily BED34_21110 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED34_21120 IPR038026 MtlR-like superfamily BED34_21120 IPR007761 Mannitol repressor MtlR-like BED34_21125 IPR013328 6-phosphogluconate dehydrogenase, domain 2 BED34_21125 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BED34_21125 IPR023028 Mannitol-1-phosphate 5-dehydrogenase BED34_21125 IPR000669 Mannitol dehydrogenase BED34_21125 IPR023027 Mannitol dehydrogenase, conserved site BED34_21125 IPR013118 Mannitol dehydrogenase, C-terminal BED34_21125 IPR036291 NAD(P)-binding domain superfamily BED34_21125 IPR013131 Mannitol dehydrogenase, N-terminal BED34_21130 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC BED34_21130 IPR013014 Phosphotransferase system, EIIC component, type 2 BED34_21130 IPR003352 Phosphotransferase system, EIIC BED34_21130 IPR003501 Phosphotransferase system, EIIB component, type 2/3 BED34_21130 IPR029503 Phosphotransferase system EIIB component, mannitol-specific BED34_21130 IPR016152 Phosphotransferase/anion transporter BED34_21130 IPR036095 PTS system IIB component-like superfamily BED34_21130 IPR002178 PTS EIIA type-2 domain BED34_21130 IPR013011 Phosphotransferase system, EIIB component, type 2 BED34_21135 IPR021413 Protein of unknown function DUF3053 BED34_21140 IPR006194 Glycine-tRNA synthetase, heterodimeric BED34_21140 IPR008909 DALR anticodon binding BED34_21140 IPR015944 Glycine-tRNA ligase, beta subunit BED34_21145 IPR006194 Glycine-tRNA synthetase, heterodimeric BED34_21145 IPR002310 Glycine-tRNA ligase, alpha subunit BED34_21150 IPR004597 DNA-3-methyladenine glycosylase I BED34_21150 IPR011257 DNA glycosylase BED34_21150 IPR005019 Methyladenine glycosylase BED34_21155 IPR000182 GNAT domain BED34_21155 IPR016181 Acyl-CoA N-acyltransferase BED34_21180 IPR011701 Major facilitator superfamily BED34_21180 IPR020846 Major facilitator superfamily domain BED34_21180 IPR036259 MFS transporter superfamily BED34_21185 IPR023756 Glyoxylate/hydroxypyruvate reductase B BED34_21185 IPR036291 NAD(P)-binding domain superfamily BED34_21185 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 BED34_21185 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site BED34_21185 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain BED34_21185 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BED34_21190 IPR017853 Glycoside hydrolase superfamily BED34_21190 IPR006047 Glycosyl hydrolase, family 13, catalytic domain BED34_21190 IPR014635 Alpha-amylase, MalS type BED34_21195 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED34_21195 IPR015424 Pyridoxal phosphate-dependent transferase BED34_21195 IPR004839 Aminotransferase, class I/classII BED34_21200 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily BED34_21200 IPR006037 Regulator of K+ conductance, C-terminal BED34_21200 IPR006512 YidE/YbjL duplication BED34_21200 IPR023018 Transport protein YidE, putative BED34_21205 IPR003346 Transposase, IS116/IS110/IS902 BED34_21205 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BED34_21210 IPR004734 Multidrug resistance protein BED34_21210 IPR036259 MFS transporter superfamily BED34_21210 IPR020846 Major facilitator superfamily domain BED34_21210 IPR011701 Major facilitator superfamily BED34_21225 IPR017938 Riboflavin synthase-like beta-barrel BED34_21225 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BED34_21225 IPR033892 Ferredoxin--NADP reductase, bacteria BED34_21225 IPR017927 FAD-binding domain, ferredoxin reductase-type BED34_21225 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain BED34_21225 IPR001433 Oxidoreductase FAD/NAD(P)-binding BED34_21230 IPR008523 Protein of unknown function DUF805 BED34_21235 IPR009918 Protein of unknown function DUF1454 BED34_21240 IPR013785 Aldolase-type TIM barrel BED34_21240 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic BED34_21240 IPR035990 Triosephosphate isomerase superfamily BED34_21240 IPR000652 Triosephosphate isomerase BED34_21240 IPR020861 Triosephosphate isomerase, active site BED34_21250 IPR000957 Sulphate/thiosulphate-binding, conserved site BED34_21250 IPR005669 Thiosulphate/Sulfate-binding protein BED34_21250 IPR034408 Sulphate/thiosulphate-binding site BED34_21255 IPR015912 Phosphofructokinase, conserved site BED34_21255 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic BED34_21255 IPR000023 Phosphofructokinase domain BED34_21255 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type BED34_21255 IPR035966 Phosphofructokinase superfamily BED34_21255 IPR022953 ATP-dependent 6-phosphofructokinase BED34_21260 IPR023783 Cation efflux pump FieF BED34_21260 IPR002524 Cation efflux protein BED34_21260 IPR027469 Cation efflux transmembrane domain superfamily BED34_21260 IPR027470 Cation efflux protein, cytoplasmic domain BED34_21260 IPR036837 Cation efflux protein, cytoplasmic domain superfamily BED34_21265 IPR012899 LTXXQ motif family protein BED34_21270 IPR039420 Transcriptional regulatory protein WalR-like BED34_21270 IPR001867 OmpR/PhoB-type DNA-binding domain BED34_21270 IPR001789 Signal transduction response regulator, receiver domain BED34_21270 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_21270 IPR011006 CheY-like superfamily BED34_21275 IPR032404 Two-component sensor protein CpxA, periplasmic domain BED34_21275 IPR038515 CpxA, periplasmic domain superfamily BED34_21275 IPR003660 HAMP domain BED34_21275 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BED34_21275 IPR005467 Histidine kinase domain BED34_21275 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BED34_21275 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BED34_21275 IPR003594 Histidine kinase/HSP90-like ATPase BED34_21275 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BED34_21280 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding BED34_21280 IPR018060 DNA binding HTH domain, AraC-type BED34_21280 IPR018062 HTH domain AraC-type, conserved site BED34_21280 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site BED34_21280 IPR035451 Ada-like domain superfamily BED34_21280 IPR004026 Ada DNA repair, metal-binding BED34_21280 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain BED34_21280 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily BED34_21280 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_21280 IPR009057 Homeobox-like domain superfamily BED34_21280 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain BED34_21280 IPR016221 Bifunctional regulatory protein Ada BED34_21285 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase BED34_21285 IPR029028 Alpha/beta knot methyltransferases BED34_21285 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BED34_21285 IPR001537 tRNA/rRNA methyltransferase, SpoU type BED34_21290 IPR010493 Serine acetyltransferase, N-terminal BED34_21290 IPR042122 Serine acetyltransferase, N-terminal domain superfamily BED34_21290 IPR018357 Hexapeptide transferase, conserved site BED34_21290 IPR005881 Serine O-acetyltransferase BED34_21290 IPR011004 Trimeric LpxA-like superfamily BED34_21290 IPR001451 Hexapeptide repeat BED34_21295 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent BED34_21295 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal BED34_21295 IPR013328 6-phosphogluconate dehydrogenase, domain 2 BED34_21295 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal BED34_21295 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BED34_21295 IPR036291 NAD(P)-binding domain superfamily BED34_21300 IPR035958 SecB-like superfamily BED34_21300 IPR003708 Bacterial protein export chaperone SecB BED34_21305 IPR002109 Glutaredoxin BED34_21305 IPR011900 Glutaredoxin, GrxC BED34_21305 IPR036249 Thioredoxin-like superfamily BED34_21305 IPR011767 Glutaredoxin active site BED34_21305 IPR014025 Glutaredoxin subgroup BED34_21310 IPR036873 Rhodanese-like domain superfamily BED34_21310 IPR001763 Rhodanese-like domain BED34_21315 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent BED34_21315 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily BED34_21315 IPR017850 Alkaline-phosphatase-like, core domain superfamily BED34_21315 IPR006124 Metalloenzyme BED34_21315 IPR011258 BPG-independent PGAM, N-terminal BED34_21320 IPR011055 Duplicated hybrid motif BED34_21320 IPR016047 Peptidase M23 BED34_21325 IPR006837 Divergent polysaccharide deacetylase BED34_21325 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel BED34_21340 IPR013149 Alcohol dehydrogenase, C-terminal BED34_21340 IPR011032 GroES-like superfamily BED34_21340 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site BED34_21340 IPR004627 L-threonine 3-dehydrogenase BED34_21340 IPR036291 NAD(P)-binding domain superfamily BED34_21340 IPR020843 Polyketide synthase, enoylreductase domain BED34_21340 IPR013154 Alcohol dehydrogenase, N-terminal BED34_21345 IPR004839 Aminotransferase, class I/classII BED34_21345 IPR015424 Pyridoxal phosphate-dependent transferase BED34_21345 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BED34_21345 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BED34_21345 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site BED34_21345 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase BED34_21350 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase BED34_21350 IPR001509 NAD-dependent epimerase/dehydratase BED34_21350 IPR036291 NAD(P)-binding domain superfamily BED34_21355 IPR002201 Glycosyl transferase, family 9 BED34_21355 IPR011910 ADP-heptose--LPS heptosyltransferase 2 BED34_21360 IPR011908 Lipopolysaccharide heptosyltransferase I BED34_21360 IPR002201 Glycosyl transferase, family 9 BED34_21365 IPR039901 3-deoxy-D-manno-octulosonic acid transferase BED34_21365 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily BED34_21365 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal BED34_21370 IPR029044 Nucleotide-diphospho-sugar transferases BED34_21370 IPR001173 Glycosyltransferase 2-like BED34_21375 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BED34_21375 IPR001980 Phosphopantetheine adenylyltransferase BED34_21375 IPR004821 Cytidyltransferase-like domain BED34_21380 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding BED34_21380 IPR010663 Zinc finger, FPG/IleRS-type BED34_21380 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type BED34_21380 IPR035937 MutM-like, N-terminal BED34_21380 IPR010979 Ribosomal protein S13-like, H2TH BED34_21380 IPR020629 Formamidopyrimidine-DNA glycosylase BED34_21380 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain BED34_21380 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site BED34_21385 IPR011332 Zinc-binding ribosomal protein BED34_21385 IPR038584 Ribosomal protein L33 superfamily BED34_21385 IPR018264 Ribosomal protein L33, conserved site BED34_21385 IPR001705 Ribosomal protein L33 BED34_21390 IPR001383 Ribosomal protein L28 BED34_21390 IPR034704 L28p-like BED34_21390 IPR037147 Ribosomal protein L28/L24 superfamily BED34_21390 IPR026569 Ribosomal protein L28/L24 BED34_21395 IPR010994 RuvA domain 2-like BED34_21395 IPR022820 Uncharacterised protein family UPF0758, YicR subfamily BED34_21395 IPR037518 MPN domain BED34_21395 IPR025657 RadC-like JAB domain BED34_21395 IPR001405 Uncharacterised protein family UPF0758 BED34_21395 IPR020891 Uncharacterised protein family UPF0758, conserved site BED34_21400 IPR035929 CoaB-like superfamily BED34_21400 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC BED34_21400 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal BED34_21400 IPR036551 Flavin prenyltransferase-like BED34_21400 IPR003382 Flavoprotein BED34_21405 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase BED34_21405 IPR036157 dUTPase-like superfamily BED34_21405 IPR029054 dUTPase-like BED34_21405 IPR033704 dUTPase, trimeric BED34_21410 IPR009057 Homeobox-like domain superfamily BED34_21410 IPR001647 DNA-binding HTH domain, TetR-type BED34_21410 IPR023769 Nucleoid occlusion factor SlmA BED34_21410 IPR023772 DNA-binding HTH domain, TetR-type, conserved site BED34_21410 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BED34_21415 IPR023031 Orotate phosphoribosyltransferase BED34_21415 IPR000836 Phosphoribosyltransferase domain BED34_21415 IPR004467 Orotate phosphoribosyl transferase domain BED34_21415 IPR029057 Phosphoribosyltransferase-like BED34_21420 IPR027408 PNPase/RNase PH domain superfamily BED34_21420 IPR036345 Exoribonuclease, PH domain 2 superfamily BED34_21420 IPR015847 Exoribonuclease, phosphorolytic domain 2 BED34_21420 IPR001247 Exoribonuclease, phosphorolytic domain 1 BED34_21420 IPR018336 Ribonuclease PH, conserved site BED34_21420 IPR002381 Ribonuclease PH, bacterial-type BED34_21420 IPR020568 Ribosomal protein S5 domain 2-type fold BED34_21425 IPR013527 YicC-like, N-terminal BED34_21425 IPR013551 Domain of unknown function DUF1732 BED34_21425 IPR005229 Conserved hypothetical protein CHP00255 BED34_21430 IPR002104 Integrase, catalytic domain BED34_21430 IPR038488 Integrase, DNA-binding domain superfamily BED34_21430 IPR025166 Integrase, DNA-binding domain BED34_21430 IPR011010 DNA breaking-rejoining enzyme, catalytic core BED34_21430 IPR010998 Integrase/recombinase, N-terminal BED34_21430 IPR013762 Integrase-like, catalytic domain superfamily BED34_21450 IPR018876 Bacteriophage P22, antirepressor protein, C-terminal BED34_21450 IPR013557 AntA/AntB antirepressor BED34_21530 IPR000160 GGDEF domain BED34_21530 IPR001633 EAL domain BED34_21530 IPR035919 EAL domain superfamily BED34_21530 IPR029787 Nucleotide cyclase BED34_21530 IPR000014 PAS domain BED34_21530 IPR035965 PAS domain superfamily BED34_21535 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site BED34_21535 IPR014748 Enoyl-CoA hydratase, C-terminal BED34_21535 IPR001753 Enoyl-CoA hydratase/isomerase BED34_21535 IPR029045 ClpP/crotonase-like domain superfamily BED34_21540 IPR008276 Concentrative nucleoside transporter BED34_21540 IPR002668 Concentrative nucleoside transporter N-terminal domain BED34_21540 IPR011657 Concentrative nucleoside transporter C-terminal domain BED34_21540 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial BED34_21540 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain BED34_21545 IPR009057 Homeobox-like domain superfamily BED34_21545 IPR025959 Winged helix-turn helix domain BED34_21545 IPR038717 Tc1-like transposase, DDE domain BED34_21545 IPR012337 Ribonuclease H-like superfamily BED34_21555 IPR005115 Uncharacterised domain UPF0126 BED34_21565 IPR020590 Guanylate kinase, conserved site BED34_21565 IPR008145 Guanylate kinase/L-type calcium channel beta subunit BED34_21565 IPR008144 Guanylate kinase-like domain BED34_21565 IPR017665 Guanylate kinase BED34_21565 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_21570 IPR012293 RNA polymerase subunit, RPB6/omega BED34_21570 IPR003716 DNA-directed RNA polymerase, omega subunit BED34_21570 IPR006110 RNA polymerase, subunit omega/K/RPB6 BED34_21570 IPR036161 RPB6/omega subunit-like superfamily BED34_21575 IPR012675 Beta-grasp domain superfamily BED34_21575 IPR002912 ACT domain BED34_21575 IPR003607 HD/PDEase domain BED34_21575 IPR004811 RelA/SpoT family BED34_21575 IPR004095 TGS BED34_21575 IPR012676 TGS-like BED34_21575 IPR033655 RelA, TGS domain BED34_21575 IPR007685 RelA/SpoT BED34_21580 IPR001537 tRNA/rRNA methyltransferase, SpoU type BED34_21580 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase BED34_21580 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BED34_21580 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal BED34_21580 IPR029028 Alpha/beta knot methyltransferases BED34_21585 IPR011545 DEAD/DEAH box helicase domain BED34_21585 IPR014001 Helicase superfamily 1/2, ATP-binding domain BED34_21585 IPR012340 Nucleic acid-binding, OB-fold BED34_21585 IPR004609 ATP-dependent DNA helicase RecG BED34_21585 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_21585 IPR033454 RecG, wedge domain BED34_21585 IPR001650 Helicase, C-terminal BED34_21590 IPR004445 Sodium/glutamate symport carrier protein GltS BED34_21595 IPR006042 Xanthine/uracil permease BED34_21595 IPR006043 Xanthine/uracil/vitamin C permease BED34_21600 IPR007844 AsmA BED34_21615 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BED34_21615 IPR038722 Ner, winged helix-turn-helix DNA-binding domain BED34_21620 IPR016181 Acyl-CoA N-acyltransferase BED34_21620 IPR029069 HotDog domain superfamily BED34_21620 IPR000182 GNAT domain BED34_21620 IPR012660 Thioesterase, putative BED34_21625 IPR003732 D-aminoacyl-tRNA deacylase DTD BED34_21625 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily BED34_21630 IPR017039 Virulence factor BrkB BED34_21630 IPR023679 Uncharacterised protein family UPF0761, bacterial BED34_21635 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BED34_21635 IPR023214 HAD superfamily BED34_21635 IPR036412 HAD-like superfamily BED34_21635 IPR041492 Haloacid dehalogenase-like hydrolase BED34_21635 IPR006439 HAD hydrolase, subfamily IA BED34_21645 IPR008147 Glutamine synthetase, beta-Grasp domain BED34_21645 IPR036651 Glutamine synthetase, N-terminal domain superfamily BED34_21645 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain BED34_21645 IPR008146 Glutamine synthetase, catalytic domain BED34_21645 IPR027303 Glutamine synthetase, glycine-rich site BED34_21645 IPR004809 Glutamine synthetase type I BED34_21645 IPR001637 Glutamine synthetase class-I, adenylation site BED34_21645 IPR027302 Glutamine synthetase, N-terminal conserved site BED34_21655 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BED34_21655 IPR003594 Histidine kinase/HSP90-like ATPase BED34_21655 IPR035965 PAS domain superfamily BED34_21655 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BED34_21655 IPR005467 Histidine kinase domain BED34_21655 IPR013767 PAS fold BED34_21655 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BED34_21655 IPR000014 PAS domain BED34_21655 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BED34_21660 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BED34_21660 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BED34_21660 IPR002078 RNA polymerase sigma factor 54 interaction domain BED34_21660 IPR001789 Signal transduction response regulator, receiver domain BED34_21660 IPR009057 Homeobox-like domain superfamily BED34_21660 IPR002197 DNA binding HTH domain, Fis-type BED34_21660 IPR025944 Sigma-54 interaction domain, conserved site BED34_21660 IPR010114 DNA-binding transcriptional regulator NtrC BED34_21660 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_21660 IPR003593 AAA+ ATPase domain BED34_21660 IPR011006 CheY-like superfamily BED34_21665 IPR034505 Anaerobic coproporphyrinogen-III oxidase BED34_21665 IPR010723 HemN, C-terminal BED34_21665 IPR007197 Radical SAM BED34_21665 IPR006638 Elp3/MiaB/NifB BED34_21665 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN BED34_21665 IPR023404 Radical SAM, alpha/beta horseshoe BED34_21670 IPR007336 Der GTPase activator BED34_21675 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_21675 IPR006073 GTP binding domain BED34_21675 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC BED34_21675 IPR030393 EngB-type guanine nucleotide-binding (G) domain BED34_21680 IPR002562 3'-5' exonuclease domain BED34_21680 IPR002421 5'-3' exonuclease, N-terminal BED34_21680 IPR036279 5'-3' exonuclease, C-terminal domain superfamily BED34_21680 IPR019760 DNA-directed DNA polymerase, family A, conserved site BED34_21680 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal BED34_21680 IPR012337 Ribonuclease H-like superfamily BED34_21680 IPR020045 DNA polymerase I-like, H3TH domain BED34_21680 IPR018320 DNA polymerase 1 BED34_21680 IPR002298 DNA polymerase A BED34_21680 IPR008918 Helix-hairpin-helix motif, class 2 BED34_21680 IPR029060 PIN-like domain superfamily BED34_21680 IPR036397 Ribonuclease H superfamily BED34_21680 IPR001098 DNA-directed DNA polymerase, family A, palm domain BED34_21685 IPR001853 DSBA-like thioredoxin domain BED34_21685 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL BED34_21685 IPR036249 Thioredoxin-like superfamily BED34_21685 IPR017937 Thioredoxin, conserved site BED34_21685 IPR013766 Thioredoxin domain BED34_21690 IPR011009 Protein kinase-like domain superfamily BED34_21690 IPR002575 Aminoglycoside phosphotransferase BED34_21690 IPR032882 SrkA/RdoA protein kinase BED34_21695 IPR009383 Protein of unknown function DUF1040 BED34_21695 IPR038134 YihD-like superfamily BED34_21700 IPR013482 Molybdenum cofactor guanylyltransferase BED34_21700 IPR025877 MobA-like NTP transferase BED34_21700 IPR029044 Nucleotide-diphospho-sugar transferases BED34_21705 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_21705 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain BED34_21710 IPR001584 Integrase, catalytic core BED34_21710 IPR025948 HTH-like domain BED34_21710 IPR012337 Ribonuclease H-like superfamily BED34_21710 IPR036397 Ribonuclease H superfamily BED34_21740 IPR011711 GntR, C-terminal BED34_21740 IPR008920 Transcription regulator FadR/GntR, C-terminal BED34_21740 IPR000524 Transcription regulator HTH, GntR BED34_21740 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_21740 IPR036390 Winged helix DNA-binding domain superfamily BED34_21745 IPR011701 Major facilitator superfamily BED34_21745 IPR020846 Major facilitator superfamily domain BED34_21745 IPR004638 Drug resistance transporter EmrB-like BED34_21745 IPR036259 MFS transporter superfamily BED34_21750 IPR028082 Periplasmic binding protein-like I BED34_21750 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BED34_21750 IPR000843 LacI-type HTH domain BED34_21755 IPR029056 Ribokinase-like BED34_21755 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site BED34_21755 IPR011877 Ribokinase BED34_21755 IPR002139 Ribokinase/fructokinase BED34_21755 IPR011611 Carbohydrate kinase PfkB BED34_21760 IPR025997 Periplasmic binding protein BED34_21760 IPR028082 Periplasmic binding protein-like I BED34_21765 IPR001851 ABC transporter, permease BED34_21770 IPR003593 AAA+ ATPase domain BED34_21770 IPR003439 ABC transporter-like BED34_21770 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_21770 IPR015861 ABC transporter, ribose import, RbsA BED34_21770 IPR017871 ABC transporter, conserved site BED34_21775 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU BED34_21775 IPR023064 D-ribose pyranase BED34_21775 IPR023750 RbsD-like superfamily BED34_21780 IPR003855 Potassium transporter BED34_21780 IPR023051 Potassium uptake protein, low affinity, Kup BED34_21785 IPR041538 ATPase RavA-like, AAA lid domain BED34_21785 IPR003593 AAA+ ATPase domain BED34_21785 IPR011704 ATPase, dynein-related, AAA domain BED34_21785 IPR023671 ATPase RavA BED34_21785 IPR022547 ATPase, RavA, C-terminal BED34_21785 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_21790 IPR008912 Uncharacterised protein family CoxE-like BED34_21790 IPR023481 Uncharacterised protein family ViaA BED34_21790 IPR002035 von Willebrand factor, type A BED34_21790 IPR036465 von Willebrand factor A-like domain superfamily BED34_21800 IPR006195 Aminoacyl-tRNA synthetase, class II BED34_21800 IPR004618 Aspartate--ammonia ligase BED34_21805 IPR011991 ArsR-like helix-turn-helix domain BED34_21805 IPR000485 AsnC-type HTH domain BED34_21805 IPR036390 Winged helix DNA-binding domain superfamily BED34_21805 IPR019888 Transcription regulator AsnC-type BED34_21805 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain BED34_21805 IPR019885 Transcription regulator HTH, AsnC-type, conserved site BED34_21805 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_21805 IPR011008 Dimeric alpha-beta barrel BED34_21810 IPR029039 Flavoprotein-like superfamily BED34_21810 IPR008254 Flavodoxin/nitric oxide synthase BED34_21815 IPR036188 FAD/NAD(P)-binding domain superfamily BED34_21815 IPR026904 GidA associated domain 3 BED34_21815 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related BED34_21815 IPR020595 MnmG-related, conserved site BED34_21815 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG BED34_21820 IPR003682 rRNA small subunit methyltransferase G BED34_21820 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BED34_21825 IPR005598 ATP synthase protein I BED34_21830 IPR023011 ATP synthase, F0 complex, subunit A, active site BED34_21830 IPR035908 ATP synthase, F0 complex, subunit A superfamily BED34_21830 IPR000568 ATP synthase, F0 complex, subunit A BED34_21835 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast BED34_21835 IPR000454 ATP synthase, F0 complex, subunit C BED34_21835 IPR002379 V-ATPase proteolipid subunit C-like domain BED34_21835 IPR038662 F1F0 ATP synthase subunit C superfamily BED34_21835 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site BED34_21835 IPR035921 F/V-ATP synthase subunit C superfamily BED34_21840 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast BED34_21840 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily BED34_21840 IPR005864 ATP synthase, F0 complex, subunit b, bacterial BED34_21845 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily BED34_21845 IPR000711 ATPase, OSCP/delta subunit BED34_21845 IPR020781 ATPase, OSCP/delta subunit, conserved site BED34_21850 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily BED34_21850 IPR000793 ATP synthase, alpha subunit, C-terminal BED34_21850 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily BED34_21850 IPR005294 ATP synthase, F1 complex, alpha subunit BED34_21850 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain BED34_21850 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily BED34_21850 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site BED34_21850 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_21850 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain BED34_21850 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain BED34_21855 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site BED34_21855 IPR000131 ATP synthase, F1 complex, gamma subunit BED34_21855 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily BED34_21860 IPR005722 ATP synthase, F1 complex, beta subunit BED34_21860 IPR003593 AAA+ ATPase domain BED34_21860 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_21860 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal BED34_21860 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily BED34_21860 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain BED34_21860 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain BED34_21860 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site BED34_21865 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal BED34_21865 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal BED34_21865 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain BED34_21865 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily BED34_21865 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit BED34_21870 IPR025877 MobA-like NTP transferase BED34_21870 IPR018357 Hexapeptide transferase, conserved site BED34_21870 IPR038009 GlmU, C-terminal LbH domain BED34_21870 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase BED34_21870 IPR029044 Nucleotide-diphospho-sugar transferases BED34_21870 IPR001451 Hexapeptide repeat BED34_21870 IPR011004 Trimeric LpxA-like superfamily BED34_21875 IPR001347 Sugar isomerase (SIS) BED34_21875 IPR029055 Nucleophile aminohydrolases, N-terminal BED34_21875 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising BED34_21875 IPR035490 GlmS/FrlB, SIS domain 2 BED34_21875 IPR035466 GlmS/AgaS, SIS domain 1 BED34_21875 IPR017932 Glutamine amidotransferase type 2 domain BED34_21880 IPR024370 PBP domain BED34_21880 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS BED34_21885 IPR011864 Phosphate ABC transporter, permease protein PstC BED34_21885 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED34_21885 IPR035906 MetI-like superfamily BED34_21890 IPR005672 Phosphate transport system permease protein PstA BED34_21890 IPR035906 MetI-like superfamily BED34_21890 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED34_21895 IPR017871 ABC transporter, conserved site BED34_21895 IPR015850 ABC transporter, phosphate import, PstB BED34_21895 IPR003593 AAA+ ATPase domain BED34_21895 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_21895 IPR005670 Phosphate transport system permease protein 1 BED34_21895 IPR003439 ABC transporter-like BED34_21900 IPR028366 Phosphate transport system protein PhoU BED34_21900 IPR026022 PhoU domain BED34_21900 IPR038078 PhoU-like domain superfamily BED34_21910 IPR001320 Ionotropic glutamate receptor BED34_21910 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter BED34_21910 IPR018313 Solute-binding protein family 3, conserved site BED34_21910 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BED34_21920 IPR035906 MetI-like superfamily BED34_21920 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED34_21920 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain BED34_21925 IPR023214 HAD superfamily BED34_21925 IPR041492 Haloacid dehalogenase-like hydrolase BED34_21925 IPR006439 HAD hydrolase, subfamily IA BED34_21925 IPR036412 HAD-like superfamily BED34_21925 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BED34_21930 IPR026033 Azaguanine-like transporters BED34_21930 IPR006043 Xanthine/uracil/vitamin C permease BED34_21940 IPR011006 CheY-like superfamily BED34_21940 IPR016032 Signal transduction response regulator, C-terminal effector BED34_21940 IPR000792 Transcription regulator LuxR, C-terminal BED34_21940 IPR001789 Signal transduction response regulator, receiver domain BED34_21940 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_21945 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BED34_21945 IPR003594 Histidine kinase/HSP90-like ATPase BED34_21945 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BED34_21945 IPR029151 Periplasmic sensor-like domain superfamily BED34_21945 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BED34_21945 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BED34_21945 IPR005467 Histidine kinase domain BED34_21950 IPR005025 NADPH-dependent FMN reductase-like BED34_21950 IPR029039 Flavoprotein-like superfamily BED34_21955 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site BED34_21955 IPR003660 HAMP domain BED34_21955 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BED34_21955 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding BED34_21955 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily BED34_21955 IPR004090 Chemotaxis methyl-accepting receptor BED34_21960 IPR035906 MetI-like superfamily BED34_21960 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BED34_21965 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_21965 IPR018449 NIL domain BED34_21965 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain BED34_21965 IPR003593 AAA+ ATPase domain BED34_21965 IPR026253 Methionine import ATP-binding protein MetN BED34_21965 IPR003439 ABC transporter-like BED34_21965 IPR017871 ABC transporter, conserved site BED34_21965 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal BED34_21975 IPR024906 Enoyl reductase FAD binding domain BED34_21975 IPR010758 Trans-2-enoyl-CoA reductase BED34_21975 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative BED34_21980 IPR006073 GTP binding domain BED34_21980 IPR004520 tRNA modification GTPase MnmE BED34_21980 IPR027368 tRNA modification GTPase MnmE domain 2 BED34_21980 IPR025867 MnmE, helical domain BED34_21980 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_21980 IPR005225 Small GTP-binding protein domain BED34_21980 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 BED34_21980 IPR018948 GTP-binding protein TrmE, N-terminal BED34_21980 IPR031168 TrmE-type guanine nucleotide-binding domain BED34_21985 IPR028053 Membrane insertase YidC, N-terminal BED34_21985 IPR038221 YidC, periplasmic domain superfamily BED34_21985 IPR038210 Membrane insertase YidC, periplasmic domain BED34_21985 IPR019998 Membrane insertase YidC BED34_21985 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 BED34_21985 IPR028055 Membrane insertase YidC/Oxa1, C-terminal BED34_21990 IPR002696 Putative membrane protein insertion efficiency factor BED34_21995 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BED34_21995 IPR000100 Ribonuclease P BED34_21995 IPR020568 Ribosomal protein S5 domain 2-type fold BED34_21995 IPR020539 Ribonuclease P, conserved site BED34_22000 IPR020939 Ribosomal protein L34, conserved site BED34_22000 IPR000271 Ribosomal protein L34 BED34_22020 IPR009057 Homeobox-like domain superfamily BED34_22020 IPR002514 Transposase IS3/IS911family BED34_22025 IPR005416 Type III secretion chaperone SycE BED34_22025 IPR010261 Tir chaperone protein (CesT) family BED34_22030 IPR015110 YopE, N-terminal domain BED34_22030 IPR003537 Yersinia virulence determinant YopE BED34_22030 IPR037168 Virulence factor YopE, GAP domain superfamily BED34_22030 IPR014773 Virulence factor YopE, GAP domain BED34_22040 IPR010985 Ribbon-helix-helix BED34_22040 IPR038296 Antitoxin ParD superfamily BED34_22040 IPR022789 Antitoxin ParD BED34_22045 IPR003115 ParB/Sulfiredoxin BED34_22045 IPR036086 ParB/Sulfiredoxin superfamily BED34_22045 IPR040873 SopB, HTH domain BED34_22045 IPR004437 ParB/RepB/Spo0J partition protein BED34_22050 IPR025669 AAA domain BED34_22050 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_22080 IPR015103 Protein-tyrosine phosphatase, YopH, N-terminal BED34_22080 IPR036484 Protein-tyrosine phosphatase, YopH, N-terminal domain superfamily BED34_22095 IPR008635 Coiled stalk of trimeric autotransporter adhesin BED34_22095 IPR005594 YadA-like, C-terminal BED34_22095 IPR008640 Head domain of trimeric autotransporter adhesin BED34_22095 IPR008126 Outer membrane adhesion, Yersinia BED34_22095 IPR011049 Serralysin-like metalloprotease, C-terminal BED34_22100 IPR000620 EamA domain BED34_22110 IPR002513 Tn3 transposase DDE domain BED34_22110 IPR025296 Domain of unknown function DUF4158 BED34_22110 IPR002513 Tn3 transposase DDE domain BED34_22110 IPR025296 Domain of unknown function DUF4158 BED34_22115 IPR006120 Resolvase, HTH domain BED34_22115 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily BED34_22115 IPR006119 Resolvase, N-terminal catalytic domain BED34_22115 IPR009057 Homeobox-like domain superfamily BED34_22115 IPR006118 Recombinase, conserved site BED34_22120 IPR006660 Arsenate reductase-like BED34_22120 IPR006659 Arsenate reductase BED34_22120 IPR036249 Thioredoxin-like superfamily BED34_22125 IPR000802 Arsenical pump membrane protein, ArsB BED34_22130 IPR018334 ArsR-type transcription regulator, HTH motif BED34_22130 IPR036388 Winged helix-like DNA-binding domain superfamily BED34_22130 IPR036390 Winged helix DNA-binding domain superfamily BED34_22130 IPR001845 HTH ArsR-type DNA-binding domain BED34_22130 IPR011991 ArsR-like helix-turn-helix domain BED34_22135 IPR005025 NADPH-dependent FMN reductase-like BED34_22135 IPR014063 Arsenate resistance ArsH BED34_22135 IPR029039 Flavoprotein-like superfamily BED34_22150 IPR014129 Conjugative transfer relaxase protein TraI BED34_22150 IPR040987 TraI, N-terminal subdomain BED34_22150 IPR014059 Conjugative relaxase, N-terminal BED34_22150 IPR040668 TraI, 2B/2B-like domain BED34_22150 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_22150 IPR014862 TrwC relaxase BED34_22150 IPR009767 DNA helicase, TraI type BED34_22165 IPR019661 Replication regulatory protein RepA2 BED34_22170 IPR017837 Plasmid replication initiator, RepA, IncFII type BED34_22170 IPR003446 Plasmid replication initiation, RepA BED34_22190 IPR002513 Tn3 transposase DDE domain BED34_22190 IPR025296 Domain of unknown function DUF4158 BED34_22195 IPR038965 Transposase InsF-like BED34_22195 IPR012337 Ribonuclease H-like superfamily BED34_22195 IPR001584 Integrase, catalytic core BED34_22195 IPR036397 Ribonuclease H superfamily BED34_22200 IPR009057 Homeobox-like domain superfamily BED34_22200 IPR002514 Transposase IS3/IS911family BED34_22215 IPR011009 Protein kinase-like domain superfamily BED34_22215 IPR000719 Protein kinase domain BED34_22215 IPR003547 Serine/threonine protein kinase, yersinia-type BED34_22215 IPR019093 Rac1-binding domain BED34_22215 IPR008271 Serine/threonine-protein kinase, active site BED34_22225 IPR008874 Enterobacterial TraT complement resistance BED34_22235 IPR016505 Type III secretion system YopQ BED34_22240 IPR038765 Papain-like cysteine peptidase superfamily BED34_22240 IPR003951 Peptidase C58, Yersinia/Haemophilus virulence surface antigen BED34_22240 IPR006473 Peptidase C58, YopT-type domain BED34_22245 IPR010261 Tir chaperone protein (CesT) family BED34_22250 IPR009057 Homeobox-like domain superfamily BED34_22250 IPR002514 Transposase IS3/IS911family BED34_22270 IPR032675 Leucine-rich repeat domain superfamily BED34_22270 IPR001611 Leucine-rich repeat BED34_22270 IPR032674 LRR-containing bacterial E3 ligase, N-terminal BED34_22270 IPR001611 Leucine-rich repeat BED34_22270 IPR032675 Leucine-rich repeat domain superfamily BED34_22270 IPR032674 LRR-containing bacterial E3 ligase, N-terminal BED34_22280 IPR001207 Transposase, mutator type BED34_22285 IPR008898 YopD-like BED34_22290 IPR006972 Secretion system effector C, SseC-like BED34_22295 IPR011990 Tetratricopeptide-like helical domain superfamily BED34_22295 IPR011716 Tetratricopeptide TPR-3 BED34_22295 IPR016379 Type III secretion system, low calcium response, chaperone LcrH/SycD, subgroup BED34_22295 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD BED34_22295 IPR013026 Tetratricopeptide repeat-containing domain BED34_22300 IPR036139 Virulence-associated V antigen superfamily BED34_22300 IPR005413 Low calcium response V antigen BED34_22305 IPR009863 Type III secretion protein, LcrG BED34_22310 IPR013405 Type III secretion system regulator, LcrR BED34_22310 IPR022797 Type III secretion system regulator LcrR/Chaperone CesD2 BED34_22315 IPR025505 FHIPEP conserved site BED34_22315 IPR042196 FHIPEP, domain 4 BED34_22315 IPR006302 Type III secretion protein HrcV BED34_22315 IPR042193 FHIPEP, domain 3 BED34_22315 IPR042194 FHIPEP, domain 1 BED34_22315 IPR001712 Type III secretion system FHIPEP BED34_22320 IPR011990 Tetratricopeptide-like helical domain superfamily BED34_22320 IPR016684 Type III secretion system chaperone, YscY BED34_22325 IPR012672 Type III secretion system YscX BED34_22330 IPR012673 Type III secretion system chaperone SycN BED34_22335 IPR038347 TyeA superfamily BED34_22335 IPR013351 Type III secretion system effector delivery regulator TyeA-related BED34_22335 IPR015144 Type III secretion system effector delivery regulator TyeA BED34_22340 IPR010812 Hypersensitivity response secretion-like, HrpJ BED34_22340 IPR013401 Type III secretion regulator, YopN/LcrE/InvE/MxiC BED34_22345 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain BED34_22345 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain BED34_22345 IPR005714 ATPase, type III secretion system, FliI/YscN BED34_22345 IPR013380 ATPase, type III secretion system, H+-transporting BED34_22345 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site BED34_22345 IPR040627 T3SS EscN ATPase, C-terminal BED34_22345 IPR003593 AAA+ ATPase domain BED34_22345 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_22350 IPR009929 Type III secretion sytem,YscO BED34_22365 IPR003283 Type III secretion system outer membrane, SpaO BED34_22365 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO BED34_22365 IPR036429 SpoA-like superfamily BED34_22365 IPR001543 Surface presentation of antigen (SpoA) BED34_22370 IPR005838 Type III secretion system inner membrane P protein BED34_22370 IPR005773 Yop virulence translocation protein R BED34_22375 IPR002191 Bacterial export protein family 3 BED34_22375 IPR006306 Type III secretion protein HrpO BED34_22380 IPR006304 Type III secretion protein SpaR/YscT BED34_22380 IPR002010 Type III secretion system inner membrane R protein BED34_22385 IPR029025 Type III secretion system substrate exporter, C-terminal BED34_22385 IPR006307 Type III exporter system, secretion apparatus protein BsaZ BED34_22385 IPR006135 Type III secretion system substrate exporter BED34_22395 IPR018062 HTH domain AraC-type, conserved site BED34_22395 IPR018060 DNA binding HTH domain, AraC-type BED34_22395 IPR037923 Transcription regulator HTH-like BED34_22395 IPR009057 Homeobox-like domain superfamily BED34_22395 IPR020449 Transcription regulator HTH, AraC- type BED34_22400 IPR035181 Protein of unknown function DUF5463 BED34_22405 IPR013353 Type III secretion system chaperone YscB BED34_22405 IPR010261 Tir chaperone protein (CesT) family BED34_22415 IPR008984 SMAD/FHA domain superfamily BED34_22415 IPR012843 Type III secretion system YscD/HrpQ BED34_22415 IPR032030 YscD, cytoplasmic domain BED34_22415 IPR032034 Yop protein translocation protein D, periplasmic domain BED34_22415 IPR000253 Forkhead-associated (FHA) domain BED34_22420 IPR012671 Type III secretion system, secretion protein E BED34_22425 IPR021123 Type III secretion, needle-protein-like BED34_22425 IPR037203 Type III secretion, needle-protein-like superfamily BED34_22425 IPR011841 Type III secretion system, needle protein BED34_22430 IPR011990 Tetratricopeptide-like helical domain superfamily BED34_22430 IPR013348 Type III secretion system YscG BED34_22435 IPR013349 Type III secretion system effector YopR BED34_22435 IPR041814 Type III secretion system virulence factor YopR, core domain BED34_22440 IPR012670 Type III secretion system, YscI/HrpB BED34_22445 IPR006182 Secretory protein YscJ/FliF BED34_22445 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ BED34_22450 IPR009510 Type III secretion system, secretion protein K BED34_22455 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE BED34_22455 IPR012842 Type III secretion system HrpE/YscL BED34_22460 IPR015103 Protein-tyrosine phosphatase, YopH, N-terminal BED34_22460 IPR036484 Protein-tyrosine phosphatase, YopH, N-terminal domain superfamily BED34_22465 IPR003546 Type III secreted modular tyrosine phosphatase, SptP/YopH BED34_22465 IPR015103 Protein-tyrosine phosphatase, YopH, N-terminal BED34_22465 IPR029021 Protein-tyrosine phosphatase-like BED34_22465 IPR000242 PTP type protein phosphatase BED34_22465 IPR016130 Protein-tyrosine phosphatase, active site BED34_22465 IPR036484 Protein-tyrosine phosphatase, YopH, N-terminal domain superfamily BED34_22465 IPR003595 Protein-tyrosine phosphatase, catalytic BED34_22465 IPR000387 Tyrosine specific protein phosphatases domain BED34_22480 IPR009057 Homeobox-like domain superfamily BED34_22480 IPR002514 Transposase IS3/IS911family BED34_22485 IPR005416 Type III secretion chaperone SycE BED34_22485 IPR010261 Tir chaperone protein (CesT) family BED34_22490 IPR037168 Virulence factor YopE, GAP domain superfamily BED34_22490 IPR003537 Yersinia virulence determinant YopE BED34_22490 IPR015110 YopE, N-terminal domain BED34_22490 IPR014773 Virulence factor YopE, GAP domain BED34_22500 IPR010985 Ribbon-helix-helix BED34_22500 IPR038296 Antitoxin ParD superfamily BED34_22500 IPR022789 Antitoxin ParD BED34_22505 IPR040873 SopB, HTH domain BED34_22505 IPR036086 ParB/Sulfiredoxin superfamily BED34_22505 IPR004437 ParB/RepB/Spo0J partition protein BED34_22505 IPR003115 ParB/Sulfiredoxin BED34_22510 IPR027417 P-loop containing nucleoside triphosphate hydrolase BED34_22510 IPR025669 AAA domain BED34_22530 IPR036484 Protein-tyrosine phosphatase, YopH, N-terminal domain superfamily BED34_22530 IPR015103 Protein-tyrosine phosphatase, YopH, N-terminal