BED34_00005	PF00589	Phage integrase family
BED34_00015	PF00816	H-NS histone family
BED34_00025	PF01464	Transglycosylase SLT domain
BED34_00040	PF04471	Restriction endonuclease
BED34_00045	PF08751	TrwC relaxase
BED34_00045	PF13604	AAA domain
BED34_00050	PF10412	Type IV secretion-system coupling protein DNA-binding domain
BED34_00055	PF10412	Type IV secretion-system coupling protein DNA-binding domain
BED34_00075	PF01381	Helix-turn-helix
BED34_00080	PF05973	BED34_00080
BED34_00160	PF08535	KorB domain
BED34_00165	PF13614	AAA domain
BED34_00170	PF04986	BED34_00170
BED34_00170	PF14319	BED34_00170
BED34_00205	PF10411	Disulfide bond isomerase protein N-terminus
BED34_00205	PF13098	Thioredoxin-like domain
BED34_00220	PF05309	BED34_00220
BED34_00225	PF06586	BED34_00225
BED34_00230	PF03743	Bacterial conjugation TrbI-like protein
BED34_00235	PF09676	BED34_00235
BED34_00250	PF06986	BED34_00250
BED34_00255	PF06834	BED34_00255
BED34_00260	PF09673	BED34_00260
BED34_00265	PF10502	Signal peptidase, peptidase S26
BED34_00270	PF08308	BED34_00270
BED34_00275	PF13728	F plasmid transfer operon protein
BED34_00280	PF06122	BED34_00280
BED34_00285	PF07916	BED34_00285
BED34_00285	PF13166	BED34_00285
BED34_00295	PF00589	Phage integrase family
BED34_00300	PF00239	Resolvase, N terminal domain
BED34_00305	PF03212	Pertactin
BED34_00305	PF03797	Autotransporter beta-domain
BED34_00305	PF16168	BED34_00305
BED34_00310	PF03865	Haemolysin secretion/activation protein ShlB/FhaC/HecB
BED34_00310	PF08479	POTRA domain, ShlB-type
BED34_00310	PF17287	BED34_00310
BED34_00315	PF05860	haemagglutination activity domain
BED34_00315	PF13018	BED34_00315
BED34_00340	PF13936	Helix-turn-helix domain
BED34_00345	PF09140	ATPase MipZ
BED34_00365	PF01527	Transposase
BED34_00370	PF05593	BED34_00370
BED34_00390	PF07180	Protein of unknown function (DUF1401)
BED34_00435	PF07180	Protein of unknown function (DUF1401)
BED34_00450	PF09134	Invasin, domain 3
BED34_00450	PF11924	Protein of unknown function (DUF3442)
BED34_00455	PF11924	Protein of unknown function (DUF3442)
BED34_00465	PF07876	Stress responsive A/B Barrel Domain
BED34_00480	PF13643	BED34_00480
BED34_00485	PF11638	DnaA N-terminal domain
BED34_00490	PF00712	DNA polymerase III beta subunit, N-terminal domain
BED34_00490	PF02767	DNA polymerase III beta subunit, central domain
BED34_00490	PF02768	DNA polymerase III beta subunit, C-terminal domain
BED34_00495	PF02463	RecF/RecN/SMC N terminal domain
BED34_00500	PF00204	DNA gyrase B
BED34_00500	PF00986	DNA gyrase B subunit, carboxyl terminus
BED34_00500	PF01751	Toprim domain
BED34_00500	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BED34_00505	PF08282	haloacid dehalogenase-like hydrolase
BED34_00510	PF02423	Ornithine cyclodeaminase/mu-crystallin family
BED34_00515	PF00291	Pyridoxal-phosphate dependent enzyme
BED34_00520	PF07676	WD40-like Beta Propeller Repeat
BED34_00520	PF12566	BED34_00520
BED34_00525	PF07119	BED34_00525
BED34_00530	PF00011	Hsp20/alpha crystallin family
BED34_00535	PF00011	Hsp20/alpha crystallin family
BED34_00540	PF01548	BED34_00540
BED34_00540	PF02371	BED34_00540
BED34_00550	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
BED34_00550	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
BED34_00555	PF00230	Major intrinsic protein
BED34_00565	PF06005	Protein of unknown function (DUF904)
BED34_00570	PF03737	Demethylmenaquinone methyltransferase
BED34_00575	PF01040	UbiA prenyltransferase family
BED34_00580	PF00004	ATPase family associated with various cellular activities (AAA)
BED34_00580	PF07724	AAA domain (Cdc48 subfamily)
BED34_00580	PF10431	C-terminal, D2-small domain, of ClpB protein
BED34_00585	PF00227	Proteasome subunit
BED34_00590	PF05036	Sporulation related domain
BED34_00595	PF00356	Bacterial regulatory proteins, lacI family
BED34_00595	PF13377	Periplasmic binding protein-like domain
BED34_00600	PF00270	DEAD/DEAH box helicase
BED34_00600	PF00271	Helicase conserved C-terminal domain
BED34_00605	PF01197	Ribosomal protein L31
BED34_00610	PF01340	Met Apo-repressor, MetJ
BED34_00615	PF01053	Cys/Met metabolism PLP-dependent enzyme
BED34_00620	PF00696	Amino acid kinase family
BED34_00620	PF00742	Homoserine dehydrogenase
BED34_00620	PF03447	Homoserine dehydrogenase, NAD binding domain
BED34_00625	PF02219	Methylenetetrahydrofolate reductase
BED34_00630	PF00311	Phosphoenolpyruvate carboxylase
BED34_00635	PF01546	Peptidase family M20/M25/M40
BED34_00635	PF07687	Peptidase dimerisation domain
BED34_00640	PF01118	Semialdehyde dehydrogenase, NAD binding domain
BED34_00640	PF02774	Semialdehyde dehydrogenase, dimerisation domain
BED34_00645	PF00696	Amino acid kinase family
BED34_00650	PF00206	Lyase
BED34_00650	PF14698	Argininosuccinate lyase C-terminal
BED34_00660	PF06438	Heme-binding protein A (HasA)
BED34_00665	PF06438	Heme-binding protein A (HasA)
BED34_00670	PF06438	Heme-binding protein A (HasA)
BED34_00680	PF00005	ABC transporter
BED34_00680	PF00664	ABC transporter transmembrane region
BED34_00685	PF13437	HlyD family secretion protein
BED34_00685	PF13533	Biotin-lipoyl like
BED34_00690	PF03544	Gram-negative bacterial TonB protein C-terminal
BED34_00705	PF00462	Glutaredoxin
BED34_00705	PF08534	Redoxin
BED34_00710	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BED34_00710	PF03466	LysR substrate binding domain
BED34_00715	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
BED34_00715	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BED34_00720	PF00440	Bacterial regulatory proteins, tetR family
BED34_00725	PF07226	BED34_00725
BED34_00730	PF05958	tRNA (Uracil-5-)-methyltransferase
BED34_00735	PF00593	TonB dependent receptor
BED34_00735	PF07715	TonB-dependent Receptor Plug Domain
BED34_00740	PF01177	Asp/Glu/Hydantoin racemase
BED34_00780	PF13407	Periplasmic binding protein domain
BED34_00785	PF00005	ABC transporter
BED34_00790	PF02653	BED34_00790
BED34_00795	PF02653	BED34_00795
BED34_00800	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BED34_00800	PF03466	LysR substrate binding domain
BED34_00805	PF04219	BED34_00805
BED34_00810	PF01078	Magnesium chelatase, subunit ChlI
BED34_00810	PF13335	BED34_00810
BED34_00810	PF13541	Subunit ChlI of Mg-chelatase
BED34_00815	PF00205	Thiamine pyrophosphate enzyme, central domain
BED34_00815	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
BED34_00815	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
BED34_00820	PF13710	ACT domain
BED34_00825	PF01063	Aminotransferase class IV
BED34_00830	PF00920	Dehydratase family
BED34_00835	PF00291	Pyridoxal-phosphate dependent enzyme
BED34_00835	PF00585	C-terminal regulatory domain of Threonine dehydratase
BED34_00850	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BED34_00850	PF03466	LysR substrate binding domain
BED34_00855	PF01450	Acetohydroxy acid isomeroreductase, catalytic domain
BED34_00855	PF07991	Acetohydroxy acid isomeroreductase, catalytic domain
BED34_00865	PF01320	Colicin immunity protein / pyocin immunity protein
BED34_00870	PF01320	Colicin immunity protein / pyocin immunity protein
BED34_00875	PF06530	BED34_00875
BED34_00880	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
BED34_00880	PF02753	Pili assembly chaperone PapD, C-terminal domain
BED34_00885	PF00419	Fimbrial protein
BED34_00890	PF13953	PapC C-terminal domain
BED34_00900	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
BED34_00900	PF02753	Pili assembly chaperone PapD, C-terminal domain
BED34_00905	PF13358	DDE superfamily endonuclease
BED34_00905	PF13384	Homeodomain-like domain
BED34_00915	PF00356	Bacterial regulatory proteins, lacI family
BED34_00915	PF13377	Periplasmic binding protein-like domain
BED34_00920	PF13673	Acetyltransferase (GNAT) domain
BED34_00925	PF13708	BED34_00925
BED34_00930	PF06755	BED34_00930
BED34_00940	PF00872	BED34_00940
BED34_00945	PF12146	Putative lysophospholipase
BED34_00980	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BED34_00980	PF05231	BED34_00980
BED34_00980	PF07730	Histidine kinase
BED34_00985	PF00072	Response regulator receiver domain
BED34_00985	PF00196	Bacterial regulatory proteins, luxR family
BED34_00990	PF00884	Sulfatase
BED34_00990	PF08019	BED34_00990
BED34_00995	PF02566	OsmC-like protein
BED34_01000	PF01548	BED34_01000
BED34_01000	PF02371	BED34_01000
BED34_01005	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
BED34_01010	PF00528	Binding-protein-dependent transport system inner membrane component
BED34_01015	PF00528	Binding-protein-dependent transport system inner membrane component
BED34_01015	PF12911	BED34_01015
BED34_01020	PF00005	ABC transporter
BED34_01020	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
BED34_01025	PF00005	ABC transporter
BED34_01025	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
BED34_01030	PF11658	BED34_01030
BED34_01035	PF11120	BED34_01035
BED34_01040	PF10995	BED34_01040
BED34_01045	PF10945	BED34_01045
BED34_01050	PF06564	YhjQ protein
BED34_01055	PF00535	Glycosyl transferase family 2
BED34_01055	PF03552	Cellulose synthase
BED34_01055	PF07238	PilZ domain
BED34_01060	PF03170	Bacterial cellulose synthase subunit
BED34_01065	PF01270	Glycosyl hydrolases family 8
BED34_01070	PF05420	BED34_01070
BED34_01070	PF13432	Tetratricopeptide repeat
BED34_01070	PF14559	Tetratricopeptide repeat
BED34_01080	PF00563	EAL domain
BED34_01080	PF17154	BED34_01080
BED34_01085	PF06178	Oligogalacturonate-specific porin protein (KdgM)
BED34_01090	PF06917	Periplasmic pectate lyase
BED34_01095	PF00754	F5/8 type C domain
BED34_01100	PF00375	Sodium:dicarboxylate symporter family
BED34_01105	PF00675	Insulinase (Peptidase family M16)
BED34_01105	PF05193	Peptidase M16 inactive domain
BED34_01110	PF00294	pfkB family carbohydrate kinase
BED34_01115	PF01361	Tautomerase enzyme
BED34_01120	PF00563	EAL domain
BED34_01130	PF02611	CDP-diacylglycerol pyrophosphatase
BED34_01135	PF03631	BED34_01135
BED34_01140	PF03212	Pertactin
BED34_01140	PF03797	Autotransporter beta-domain
BED34_01145	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
BED34_01145	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BED34_01150	PF04378	Ribosomal RNA small subunit methyltransferase D, RsmJ
BED34_01155	PF01432	Peptidase family M3
BED34_01160	PF04445	Putative SAM-dependent methyltransferase
BED34_01165	PF08548	Peptidase M10 serralysin C terminal
BED34_01170	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
BED34_01170	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
BED34_01175	PF00582	Universal stress protein family
BED34_01180	PF01548	BED34_01180
BED34_01180	PF02371	BED34_01180
BED34_01185	PF10625	BED34_01185
BED34_01190	PF01384	BED34_01190
BED34_01195	PF03486	HI0933-like protein
BED34_01200	PF08722	TnsA endonuclease N terminal
BED34_01205	PF00665	Integrase core domain
BED34_01210	PF13401	AAA domain
BED34_01225	PF16473	BED34_01225
BED34_01235	PF13610	BED34_01235
BED34_01240	PF07728	AAA domain (dynein-related subfamily)
BED34_01250	PF04607	Region found in RelA / SpoT proteins
BED34_01260	PF00375	Sodium:dicarboxylate symporter family
BED34_01265	PF14330	BED34_01265
BED34_01270	PF07287	BED34_01270
BED34_01275	PF05034	Methylaspartate ammonia-lyase N-terminus
BED34_01275	PF07476	Methylaspartate ammonia-lyase C-terminus
BED34_01280	PF06368	Methylaspartate mutase E chain (MutE)
BED34_01295	PF00288	GHMP kinases N terminal domain
BED34_01300	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
BED34_01305	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BED34_01305	PF03466	LysR substrate binding domain
BED34_01310	PF05681	BED34_01310
BED34_01310	PF05683	Fumarase C-terminus
BED34_01320	PF08282	haloacid dehalogenase-like hydrolase
BED34_01330	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BED34_01330	PF03466	LysR substrate binding domain
BED34_01335	PF07690	Major Facilitator Superfamily
BED34_01340	PF00171	Aldehyde dehydrogenase family
BED34_01345	PF04962	KduI/IolB family
BED34_01350	PF01380	SIS domain
BED34_01350	PF01418	Helix-turn-helix domain, rpiR family
BED34_01355	PF00294	pfkB family carbohydrate kinase
BED34_01355	PF09863	Uncharacterized protein conserved in bacteria (DUF2090)
BED34_01360	PF00205	Thiamine pyrophosphate enzyme, central domain
BED34_01360	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
BED34_01360	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
BED34_01365	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
BED34_01365	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
BED34_01370	PF01261	Xylose isomerase-like TIM barrel
BED34_01375	PF00583	Acetyltransferase (GNAT) family
BED34_01380	PF02678	Pirin
BED34_01385	PF00356	Bacterial regulatory proteins, lacI family
BED34_01385	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
BED34_01390	PF02447	BED34_01390
BED34_01395	PF01202	Shikimate kinase
BED34_01400	PF01914	BED34_01400
BED34_01405	PF01118	Semialdehyde dehydrogenase, NAD binding domain
BED34_01405	PF02774	Semialdehyde dehydrogenase, dimerisation domain
BED34_01410	PF00205	Thiamine pyrophosphate enzyme, central domain
BED34_01410	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
BED34_01410	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
BED34_01415	PF03306	Alpha-acetolactate decarboxylase
BED34_01420	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BED34_01420	PF03466	LysR substrate binding domain
BED34_01425	PF06580	BED34_01425
BED34_01425	PF07694	5TMR of 5TMR-LYT
BED34_01430	PF00128	Alpha amylase, catalytic domain
BED34_01430	PF02806	Alpha amylase, C-terminal all-beta domain
BED34_01430	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
BED34_01435	PF00128	Alpha amylase, catalytic domain
BED34_01435	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
BED34_01440	PF00483	Nucleotidyl transferase
BED34_01445	PF00534	Glycosyl transferases group 1
BED34_01445	PF08323	Starch synthase catalytic domain
BED34_01450	PF00343	Carbohydrate phosphorylase
BED34_01455	PF01266	FAD dependent oxidoreductase
BED34_01455	PF16901	BED34_01455
BED34_01465	PF01548	BED34_01465
BED34_01465	PF02371	BED34_01465
BED34_01470	PF00455	BED34_01470
BED34_01470	PF08220	DeoR-like helix-turn-helix domain
BED34_01475	PF01694	Rhomboid family
BED34_01475	PF12122	Protein of unknown function (DUF3582)
BED34_01480	PF00581	Rhodanese-like domain
BED34_01490	PF00196	Bacterial regulatory proteins, luxR family
BED34_01495	PF00343	Carbohydrate phosphorylase
BED34_01500	PF02446	4-alpha-glucanotransferase
BED34_01505	PF01106	NifU-like domain
BED34_01505	PF01521	Iron-sulphur cluster biosynthesis
BED34_01515	PF00561	alpha/beta hydrolase fold
BED34_01520	PF07338	Protein of unknown function (DUF1471)
BED34_01525	PF01548	BED34_01525
BED34_01525	PF02371	BED34_01525
BED34_01530	PF09012	FeoC like transcriptional regulator
BED34_01535	PF02421	Ferrous iron transport protein B
BED34_01535	PF07664	BED34_01535
BED34_01535	PF07670	Nucleoside recognition
BED34_01540	PF04023	FeoA domain
BED34_01545	PF00575	S1 RNA binding domain
BED34_01545	PF09371	Tex-like protein N-terminal domain
BED34_01545	PF12836	Helix-hairpin-helix motif
BED34_01545	PF16921	BED34_01545
BED34_01550	PF07690	Major Facilitator Superfamily
BED34_01570	PF01272	Transcription elongation factor, GreA/GreB, C-term
BED34_01570	PF03449	Transcription elongation factor, N-terminal
BED34_01575	PF00072	Response regulator receiver domain
BED34_01575	PF00486	Transcriptional regulatory protein, C terminal
BED34_01580	PF00512	His Kinase A (phospho-acceptor) domain
BED34_01580	PF00672	HAMP domain
BED34_01580	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BED34_01585	PF01293	Phosphoenolpyruvate carboxykinase
BED34_01590	PF01430	Hsp33 protein
BED34_01595	PF01479	S4 domain
BED34_01600	PF13419	Haloacid dehalogenase-like hydrolase
BED34_01605	PF07095	Intracellular growth attenuator protein IgaA
BED34_01610	PF00293	NUDIX domain
BED34_01615	PF00905	Penicillin binding protein transpeptidase domain
BED34_01615	PF00912	Transglycosylase
BED34_01615	PF17092	BED34_01615
BED34_01620	PF11104	Type IV pilus assembly protein PilM;
BED34_01625	PF05137	BED34_01625
BED34_01635	PF10748	BED34_01635
BED34_01640	PF00263	BED34_01640
BED34_01640	PF03958	Bacterial type II/III secretion system short domain
BED34_01645	PF01202	Shikimate kinase
BED34_01650	PF01761	3-dehydroquinate synthase
BED34_01655	PF05036	Sporulation related domain
BED34_01660	PF02086	D12 class N6 adenine-specific DNA methyltransferase
BED34_01665	PF00834	Ribulose-phosphate 3 epimerase family
BED34_01675	PF00579	tRNA synthetases class I (W and Y)
BED34_01680	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
BED34_01680	PF10414	Sirohaem synthase dimerisation region
BED34_01680	PF13241	Putative NAD(P)-binding
BED34_01680	PF14824	Sirohaem biosynthesis protein central
BED34_01690	PF13806	Rieske-like [2Fe-2S] domain
BED34_01695	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
BED34_01695	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
BED34_01695	PF04324	BFD-like [2Fe-2S] binding domain
BED34_01695	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BED34_01700	PF07969	Amidohydrolase family
BED34_01705	PF07690	Major Facilitator Superfamily
BED34_01710	PF00356	Bacterial regulatory proteins, lacI family
BED34_01710	PF13377	Periplasmic binding protein-like domain
BED34_01715	PF02056	Family 4 glycosyl hydrolase
BED34_01715	PF11975	Family 4 glycosyl hydrolase C-terminal domain
BED34_01720	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
BED34_01725	PF05872	BED34_01725
BED34_01730	PF00117	Glutamine amidotransferase class-I
BED34_01735	PF00202	Aminotransferase class-III
BED34_01745	PF00027	Cyclic nucleotide-binding domain
BED34_01745	PF00325	Bacterial regulatory proteins, crp family
BED34_01750	PF02566	OsmC-like protein
BED34_01755	PF00485	Phosphoribulokinase / Uridine kinase family
BED34_01760	PF06794	Uncharacterised protein family (UPF0270)
BED34_01765	PF00561	alpha/beta hydrolase fold
BED34_01770	PF01810	BED34_01770
BED34_01775	PF02567	Phenazine biosynthesis-like protein
BED34_01780	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
BED34_01790	PF00528	Binding-protein-dependent transport system inner membrane component
BED34_01795	PF02668	Taurine catabolism dioxygenase TauD, TfdA family
BED34_01800	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
BED34_01805	PF00535	Glycosyl transferase family 2
BED34_01810	PF00005	ABC transporter
BED34_01810	PF12848	ABC transporter
BED34_01815	PF02525	Flavodoxin-like fold
BED34_01820	PF00999	Sodium/hydrogen exchanger family
BED34_01820	PF02254	TrkA-N domain
BED34_01825	PF09526	BED34_01825
BED34_01830	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
BED34_01835	PF04102	SlyX
BED34_01840	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
BED34_01840	PF01346	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
BED34_01845	PF08348	BED34_01845
BED34_01845	PF13309	BED34_01845
BED34_01850	PF02635	DsrE/DsrF-like family
BED34_01855	PF02635	DsrE/DsrF-like family
BED34_01860	PF04077	DsrH like protein
BED34_01865	PF00164	Ribosomal protein S12/S23
BED34_01870	PF00177	Ribosomal protein S7p/S5e
BED34_01875	PF00009	Elongation factor Tu GTP binding domain
BED34_01875	PF00679	Elongation factor G C-terminus
BED34_01875	PF03144	Elongation factor Tu domain 2
BED34_01875	PF03764	Elongation factor G, domain IV
BED34_01875	PF14492	Elongation Factor G, domain II
BED34_01885	PF04324	BFD-like [2Fe-2S] binding domain
BED34_01890	PF00210	Ferritin-like domain
BED34_01895	PF00338	Ribosomal protein S10p/S20e
BED34_01900	PF00297	Ribosomal protein L3
BED34_01905	PF00573	Ribosomal protein L4/L1 family
BED34_01910	PF00276	Ribosomal protein L23
BED34_01915	PF00181	Ribosomal Proteins L2, RNA binding domain
BED34_01915	PF03947	Ribosomal Proteins L2, C-terminal domain
BED34_01920	PF00203	Ribosomal protein S19
BED34_01925	PF00237	Ribosomal protein L22p/L17e
BED34_01930	PF00189	Ribosomal protein S3, C-terminal domain
BED34_01930	PF07650	KH domain
BED34_01935	PF00252	Ribosomal protein L16p/L10e
BED34_01940	PF00831	Ribosomal L29 protein
BED34_01945	PF00366	Ribosomal protein S17
BED34_01950	PF00238	Ribosomal protein L14p/L23e
BED34_01955	PF00467	KOW motif
BED34_01955	PF17136	BED34_01955
BED34_01960	PF00281	Ribosomal protein L5
BED34_01960	PF00673	ribosomal L5P family C-terminus
BED34_01965	PF00253	Ribosomal protein S14p/S29e
BED34_01970	PF00410	Ribosomal protein S8
BED34_01975	PF00347	Ribosomal protein L6
BED34_01980	PF00861	Ribosomal L18p/L5e family
BED34_01985	PF00333	Ribosomal protein S5, N-terminal domain
BED34_01985	PF03719	Ribosomal protein S5, C-terminal domain
BED34_01990	PF00327	Ribosomal protein L30p/L7e
BED34_01995	PF00828	Ribosomal protein L18e/L15
BED34_02000	PF00344	SecY translocase
BED34_02005	PF00444	Ribosomal protein L36
BED34_02015	PF00411	Ribosomal protein S11
BED34_02020	PF00163	Ribosomal protein S4/S9 N-terminal domain
BED34_02020	PF01479	S4 domain
BED34_02025	PF01000	RNA polymerase Rpb3/RpoA insert domain
BED34_02025	PF01193	RNA polymerase Rpb3/Rpb11 dimerisation domain
BED34_02025	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
BED34_02030	PF01196	Ribosomal protein L17
BED34_02035	PF09350	BED34_02035
BED34_02040	PF13411	MerR HTH family regulatory protein
BED34_02045	PF03889	BED34_02045
BED34_02050	PF05598	BED34_02050
BED34_02050	PF13751	BED34_02050
BED34_02055	PF01741	Large-conductance mechanosensitive channel, MscL
BED34_02060	PF02080	TrkA-C domain
BED34_02060	PF02254	TrkA-N domain
BED34_02065	PF01029	NusB family
BED34_02065	PF01189	NOL1/NOP2/sun family
BED34_02070	PF00551	Formyl transferase
BED34_02070	PF02911	Formyl transferase, C-terminal domain
BED34_02075	PF01327	Polypeptide deformylase
BED34_02080	PF02481	DNA recombination-mediator protein A
BED34_02085	PF04361	BED34_02085
BED34_02090	PF01396	BED34_02090
BED34_02095	PF01300	Telomere recombination
BED34_02100	PF01488	Shikimate / quinate 5-dehydrogenase
BED34_02100	PF08501	Shikimate dehydrogenase substrate binding domain
BED34_02105	PF00132	Bacterial transferase hexapeptide (six repeats)
BED34_02140	PF04204	Homoserine O-succinyltransferase
BED34_02145	PF01274	Malate synthase
BED34_02150	PF00463	Isocitrate lyase family
BED34_02155	PF06315	Isocitrate dehydrogenase kinase/phosphatase (AceK)
BED34_02160	PF01614	Bacterial transcriptional regulator
BED34_02160	PF09339	IclR helix-turn-helix domain
BED34_02165	PF00809	Pterin binding enzyme
BED34_02165	PF02310	B12 binding domain
BED34_02165	PF02574	Homocysteine S-methyltransferase
BED34_02165	PF02607	B12 binding domain
BED34_02165	PF02965	Vitamin B12 dependent methionine synthase, activation domain
BED34_02170	PF05860	haemagglutination activity domain
BED34_02170	PF13332	BED34_02170
BED34_02175	PF03865	Haemolysin secretion/activation protein ShlB/FhaC/HecB
BED34_02175	PF08479	POTRA domain, ShlB-type
BED34_02175	PF17287	BED34_02175
BED34_02180	PF01758	Sodium Bile acid symporter family
BED34_02185	PF00696	Amino acid kinase family
BED34_02190	PF00342	Phosphoglucose isomerase
BED34_02195	PF06146	BED34_02195
BED34_02200	PF01548	BED34_02200
BED34_02200	PF02371	BED34_02200
BED34_02205	PF00528	Binding-protein-dependent transport system inner membrane component
BED34_02215	PF13416	Bacterial extracellular solute-binding protein
BED34_02220	PF00005	ABC transporter
BED34_02220	PF08402	TOBE domain
BED34_02225	PF02264	LamB porin
BED34_02230	PF07148	BED34_02230
BED34_02240	PF04345	Chorismate lyase
BED34_02245	PF01040	UbiA prenyltransferase family
BED34_02250	PF01553	Acyltransferase
BED34_02255	PF01219	Prokaryotic diacylglycerol kinase
BED34_02260	PF00717	Peptidase S24-like
BED34_02260	PF01726	LexA DNA binding domain
BED34_02265	PF05532	CsbD-like
BED34_02270	PF01475	Ferric uptake regulator family
BED34_02275	PF01757	BED34_02275
BED34_02280	PF01207	Dihydrouridine synthase (Dus)
BED34_02285	PF09583	BED34_02285
BED34_02295	PF00107	Zinc-binding dehydrogenase
BED34_02295	PF08240	Alcohol dehydrogenase GroES-like domain
BED34_02300	PF00772	DnaB-like helicase N terminal domain
BED34_02300	PF03796	DnaB-like helicase C terminal domain
BED34_02310	PF00155	Aminotransferase class I and II
BED34_02315	PF04237	YjbR
BED34_02325	PF00436	Single-strand binding protein family
BED34_02330	PF07804	HipA-like C-terminal domain
BED34_02330	PF13657	HipA N-terminal domain
BED34_02335	PF01381	Helix-turn-helix
BED34_02340	PF00043	Glutathione S-transferase, C-terminal domain
BED34_02340	PF02798	Glutathione S-transferase, N-terminal domain
BED34_02345	PF00860	Permease family
BED34_02350	PF00999	Sodium/hydrogen exchanger family
BED34_02355	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BED34_02355	PF03466	LysR substrate binding domain
BED34_02360	PF03788	BED34_02360
BED34_02370	PF00005	ABC transporter
BED34_02375	PF00528	Binding-protein-dependent transport system inner membrane component
BED34_02380	PF00528	Binding-protein-dependent transport system inner membrane component
BED34_02385	PF00497	Bacterial extracellular solute-binding proteins, family 3
BED34_02390	PF10142	PhoPQ-activated pathogenicity-related protein
BED34_02395	PF01548	BED34_02395
BED34_02395	PF02371	BED34_02395
BED34_02400	PF03279	BED34_02400
BED34_02405	PF00939	Sodium:sulfate symporter transmembrane region
BED34_02410	PF00313	'Cold-shock' DNA-binding domain
BED34_02415	PF00313	'Cold-shock' DNA-binding domain
BED34_02420	PF05433	BED34_02420
BED34_02430	PF02954	Bacterial regulatory protein, Fis family
BED34_02435	PF01207	Dihydrouridine synthase (Dus)
BED34_02440	PF06325	Ribosomal protein L11 methyltransferase (PrmA)
BED34_02445	PF00474	Sodium:solute symporter family
BED34_02450	PF06196	BED34_02450
BED34_02455	PF00289	Carbamoyl-phosphate synthase L chain, N-terminal domain
BED34_02455	PF02785	Biotin carboxylase C-terminal domain
BED34_02455	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
BED34_02460	PF00364	Biotin-requiring enzyme
BED34_02465	PF01220	Dehydroquinase class II
BED34_02470	PF01794	BED34_02470
BED34_02475	PF00174	Oxidoreductase molybdopterin binding domain
BED34_02480	PF00107	Zinc-binding dehydrogenase
BED34_02480	PF08240	Alcohol dehydrogenase GroES-like domain
BED34_02485	PF00563	EAL domain
BED34_02485	PF00990	GGDEF domain
BED34_02485	PF17157	BED34_02485
BED34_02490	PF06723	MreB/Mbl protein
BED34_02495	PF04085	rod shape-determining protein MreC
BED34_02500	PF04093	BED34_02500
BED34_02505	PF02545	Maf-like protein
BED34_02510	PF00575	S1 RNA binding domain
BED34_02510	PF10150	Ribonuclease E/G family
BED34_02515	PF13116	BED34_02515
BED34_02515	PF13502	BED34_02515
BED34_02520	PF00795	Carbon-nitrogen hydrolase
BED34_02525	PF01523	Putative modulator of DNA gyrase
BED34_02530	PF07804	HipA-like C-terminal domain
BED34_02530	PF13657	HipA N-terminal domain
BED34_02535	PF01381	Helix-turn-helix
BED34_02545	PF10828	BED34_02545
BED34_02550	PF13539	D-alanyl-D-alanine carboxypeptidase
BED34_02555	PF16083	BED34_02555
BED34_02560	PF03534	Salmonella virulence plasmid 65kDa B protein
BED34_02560	PF12255	Insecticide toxin TcdB middle/C-terminal region
BED34_02560	PF12256	Insecticide toxin TcdB middle/N-terminal region
BED34_02580	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BED34_02580	PF03466	LysR substrate binding domain
BED34_02585	PF07869	BED34_02585
BED34_02590	PF13437	HlyD family secretion protein
BED34_02590	PF13533	Biotin-lipoyl like
BED34_02595	PF04632	BED34_02595
BED34_02600	PF00171	Aldehyde dehydrogenase family
BED34_02605	PF00545	ribonuclease
BED34_02610	PF01337	Barstar (barnase inhibitor)
BED34_02615	PF04751	Protein of unknown function (DUF615)
BED34_02620	PF00589	Phage integrase family
BED34_02650	PF02086	D12 class N6 adenine-specific DNA methyltransferase
BED34_02655	PF01507	Phosphoadenosine phosphosulfate reductase family
BED34_02660	PF05840	BED34_02660
BED34_02665	PF04606	BED34_02665
BED34_02675	PF03237	Terminase-like family
BED34_02675	PF06056	Putative ATPase subunit of terminase (gpP-like)
BED34_02675	PF17289	BED34_02675
BED34_02680	PF05929	BED34_02680
BED34_02685	PF05125	BED34_02685
BED34_02690	PF05944	BED34_02690
BED34_02695	PF05926	BED34_02695
BED34_02700	PF06891	BED34_02700
BED34_02715	PF10772	BED34_02715
BED34_02720	PF04550	BED34_02720
BED34_02725	PF13539	D-alanyl-D-alanine carboxypeptidase
BED34_02735	PF10963	BED34_02735
BED34_02740	PF10145	BED34_02740
BED34_02745	PF10761	BED34_02745
BED34_02750	PF04865	BED34_02750
BED34_02765	PF02413	BED34_02765
BED34_02790	PF14355	BED34_02790
BED34_02795	PF01523	Putative modulator of DNA gyrase
BED34_02800	PF01548	BED34_02800
BED34_02800	PF02371	BED34_02800
BED34_02805	PF07361	Cytochrome b562
BED34_02810	PF01272	Transcription elongation factor, GreA/GreB, C-term
BED34_02810	PF14760	Rnk N-terminus
BED34_02815	PF00874	PRD domain
BED34_02820	PF14272	BED34_02820
BED34_02825	PF14189	BED34_02825
BED34_02830	PF14188	BED34_02830
BED34_02835	PF14187	BED34_02835
BED34_02840	PF01979	Amidohydrolase family
BED34_02845	PF03841	L-seryl-tRNA selenium transferase
BED34_02850	PF07071	Protein of unknown function (DUF1341)
BED34_02860	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
BED34_02860	PF00874	PRD domain
BED34_02860	PF05043	Mga helix-turn-helix domain
BED34_02860	PF08279	HTH domain
BED34_02865	PF01381	Helix-turn-helix
BED34_02870	PF05015	Plasmid maintenance system killer protein
BED34_02880	PF00356	Bacterial regulatory proteins, lacI family
BED34_02880	PF13377	Periplasmic binding protein-like domain
BED34_02890	PF00128	Alpha amylase, catalytic domain
BED34_02890	PF11941	Domain of unknown function (DUF3459)
BED34_02895	PF00227	Proteasome subunit
BED34_02900	PF01841	Transglutaminase-like superfamily
BED34_02900	PF08379	BED34_02900
BED34_02905	PF04168	BED34_02905
BED34_02910	PF14403	BED34_02910
BED34_02915	PF01042	Endoribonuclease L-PSP
BED34_02920	PF01948	Aspartate carbamoyltransferase regulatory chain, allosteric domain
BED34_02920	PF02748	Aspartate carbamoyltransferase regulatory chain, metal binding domain
BED34_02925	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
BED34_02925	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
BED34_02930	PF00381	PTS HPr component phosphorylation site
BED34_02935	PF03668	BED34_02935
BED34_02940	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
BED34_02945	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
BED34_02950	PF00309	BED34_02950
BED34_02950	PF04552	Sigma-54, DNA binding domain
BED34_02950	PF04963	Sigma-54 factor, core binding domain
BED34_02955	PF00005	ABC transporter
BED34_02955	PF12399	Branched-chain amino acid ATP-binding cassette transporter
BED34_02960	PF03968	OstA-like protein
BED34_02965	PF06835	Lipopolysaccharide-assembly, LptC-related
BED34_02970	PF08282	haloacid dehalogenase-like hydrolase
BED34_02975	PF00571	CBS domain
BED34_02975	PF01380	SIS domain
BED34_02985	PF00005	ABC transporter
BED34_02990	PF02405	BED34_02990
BED34_02995	PF02470	BED34_02995
BED34_03000	PF05494	Toluene tolerance, Ttg2
BED34_03005	PF13466	STAS domain
BED34_03010	PF01722	BolA-like protein
BED34_03015	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
BED34_03020	PF13180	PDZ domain
BED34_03020	PF13365	Trypsin-like peptidase domain
BED34_03025	PF00595	PDZ domain (Also known as DHR or GLGF)
BED34_03025	PF13180	PDZ domain
BED34_03025	PF13365	Trypsin-like peptidase domain
BED34_03030	PF06295	BED34_03030
BED34_03035	PF03969	AFG1-like ATPase
BED34_03040	PF00572	Ribosomal protein L13
BED34_03045	PF00380	Ribosomal protein S9/S16
BED34_03050	PF00043	Glutathione S-transferase, C-terminal domain
BED34_03050	PF02798	Glutathione S-transferase, N-terminal domain
BED34_03055	PF04386	Stringent starvation protein B
BED34_03070	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BED34_03070	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
BED34_03075	PF00310	Glutamine amidotransferases class-II
BED34_03075	PF01493	GXGXG motif
BED34_03075	PF01645	Conserved region in glutamate synthase
BED34_03075	PF04898	Glutamate synthase central domain
BED34_03080	PF04055	Radical SAM superfamily
BED34_03080	PF16199	BED34_03080
BED34_03085	PF00072	Response regulator receiver domain
BED34_03085	PF00512	His Kinase A (phospho-acceptor) domain
BED34_03085	PF00989	PAS fold
BED34_03085	PF01627	Hpt domain
BED34_03085	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BED34_03095	PF00912	Transglycosylase
BED34_03100	PF04972	BON domain
BED34_03105	PF13580	SIS domain
BED34_03110	PF02021	Uncharacterised protein family UPF0102
BED34_03115	PF04348	LppC putative lipoprotein
BED34_03120	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
BED34_03140	PF00239	Resolvase, N terminal domain
BED34_03150	PF00145	C-5 cytosine-specific DNA methylase
BED34_03160	PF01381	Helix-turn-helix
BED34_03170	PF16970	BED34_03170
BED34_03175	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
BED34_03175	PF02753	Pili assembly chaperone PapD, C-terminal domain
BED34_03180	PF00577	Outer membrane usher protein
BED34_03180	PF13953	PapC C-terminal domain
BED34_03180	PF13954	PapC N-terminal domain
BED34_03190	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BED34_03190	PF03466	LysR substrate binding domain
BED34_03195	PF00248	Aldo/keto reductase family
BED34_03200	PF00107	Zinc-binding dehydrogenase
BED34_03200	PF08240	Alcohol dehydrogenase GroES-like domain
BED34_03205	PF02678	Pirin
BED34_03210	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BED34_03210	PF03466	LysR substrate binding domain
BED34_03215	PF13409	Glutathione S-transferase, N-terminal domain
BED34_03215	PF13410	Glutathione S-transferase, C-terminal domain
BED34_03220	PF07681	BED34_03220
BED34_03225	PF13997	BED34_03225
BED34_03230	PF07332	BED34_03230
BED34_03235	PF05957	BED34_03235
BED34_03240	PF06476	BED34_03240
BED34_03245	PF13721	SecD export protein N-terminal TM region
BED34_03250	PF09335	BED34_03250
BED34_03260	PF00392	Bacterial regulatory proteins, gntR family
BED34_03260	PF07729	FCD domain
BED34_03265	PF07690	Major Facilitator Superfamily
BED34_03270	PF02614	Glucuronate isomerase
BED34_03275	PF01232	Mannitol dehydrogenase Rossmann domain
BED34_03275	PF08125	Mannitol dehydrogenase C-terminal domain
BED34_03280	PF04295	BED34_03280
BED34_03280	PF08666	SAF domain
BED34_03285	PF10688	BED34_03285
BED34_03290	PF00375	Sodium:dicarboxylate symporter family
BED34_03295	PF03741	BED34_03295
BED34_03305	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
BED34_03310	PF01863	Protein of unknown function DUF45
BED34_03315	PF03797	Autotransporter beta-domain
BED34_03325	PF03797	Autotransporter beta-domain
BED34_03330	PF05175	Methyltransferase small domain
BED34_03335	PF01548	BED34_03335
BED34_03335	PF02371	BED34_03335
BED34_03340	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
BED34_03340	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BED34_03345	PF00892	EamA-like transporter family
BED34_03350	PF03729	BED34_03350
BED34_03360	PF00282	Pyridoxal-dependent decarboxylase conserved domain
BED34_03365	PF13520	Amino acid permease
BED34_03370	PF04960	Glutaminase
BED34_03380	PF00872	BED34_03380
BED34_03385	PF00367	phosphotransferase system, EIIB
BED34_03390	PF13580	SIS domain
BED34_03395	PF01380	SIS domain
BED34_03395	PF01418	Helix-turn-helix domain, rpiR family
BED34_03400	PF00933	Glycosyl hydrolase family 3 N terminal domain
BED34_03410	PF07075	Protein of unknown function (DUF1343)
BED34_03420	PF01548	BED34_03420
BED34_03420	PF02371	BED34_03420
BED34_03425	PF00140	Sigma-70 factor, region 1
BED34_03425	PF03979	Sigma-70 factor, region 1
BED34_03425	PF04539	Sigma-70 region 3
BED34_03425	PF04542	Sigma-70 region 2
BED34_03425	PF04545	Sigma-70, region 4
BED34_03425	PF04546	Sigma-70, non-essential region
BED34_03430	PF01807	CHC2 zinc finger
BED34_03430	PF08275	DNA primase catalytic core, N-terminal domain
BED34_03430	PF08278	DNA primase DnaG DnaB-binding
BED34_03430	PF10410	DnaB-helicase binding domain of primase
BED34_03430	PF13155	Toprim-like
BED34_03435	PF01165	Ribosomal protein S21
BED34_03440	PF00814	Glycoprotease family
BED34_03445	PF02660	BED34_03445
BED34_03450	PF02152	Dihydroneopterin aldolase
BED34_03455	PF02673	BED34_03455
BED34_03460	PF01743	Poly A polymerase head domain
BED34_03460	PF01966	HD domain
BED34_03460	PF12627	Probable RNA and SrmB- binding site of polymerase A
BED34_03465	PF08239	Bacterial SH3 domain
BED34_03470	PF01928	CYTH domain
BED34_03475	PF03710	Glutamate-ammonia ligase adenylyltransferase
BED34_03475	PF08335	GlnD PII-uridylyltransferase
BED34_03480	PF00294	pfkB family carbohydrate kinase
BED34_03480	PF01467	Cytidylyltransferase
BED34_03485	PF13520	Amino acid permease
BED34_03490	PF04380	BED34_03490
BED34_03495	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
BED34_03500	PF02900	Catalytic LigB subunit of aromatic ring-opening dioxygenase
BED34_03505	PF03738	Glutathionylspermidine synthase preATP-grasp
BED34_03510	PF06693	BED34_03510
BED34_03520	PF02321	Outer membrane efflux protein
BED34_03525	PF00293	NUDIX domain
BED34_03530	PF06853	BED34_03530
BED34_03535	PF00149	Calcineurin-like phosphoesterase
BED34_03540	PF05728	Uncharacterised protein family (UPF0227)
BED34_03545	PF00204	DNA gyrase B
BED34_03545	PF00986	DNA gyrase B subunit, carboxyl terminus
BED34_03545	PF01751	Toprim domain
BED34_03545	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BED34_03550	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BED34_03550	PF03466	LysR substrate binding domain
BED34_03555	PF03992	Antibiotic biosynthesis monooxygenase
BED34_03560	PF02525	Flavodoxin-like fold
BED34_03565	PF00521	DNA gyrase/topoisomerase IV, subunit A
BED34_03565	PF03989	DNA gyrase C-terminal domain, beta-propeller
BED34_03570	PF01553	Acyltransferase
BED34_03575	PF00394	Multicopper oxidase
BED34_03575	PF07731	Multicopper oxidase
BED34_03575	PF07732	Multicopper oxidase
BED34_03580	PF04055	Radical SAM superfamily
BED34_03580	PF08497	BED34_03580
BED34_03580	PF11842	BED34_03580
BED34_03585	PF00248	Aldo/keto reductase family
BED34_03590	PF00465	Iron-containing alcohol dehydrogenase
BED34_03595	PF06719	BED34_03595
BED34_03595	PF12833	Helix-turn-helix domain
BED34_03600	PF09335	BED34_03600
BED34_03605	PF01053	Cys/Met metabolism PLP-dependent enzyme
BED34_03610	PF01618	BED34_03610
BED34_03615	PF02472	Biopolymer transport protein ExbD/TolR
BED34_03620	PF00092	von Willebrand factor type A domain
BED34_03625	PF16964	BED34_03625
BED34_03630	PF07811	BED34_03630
BED34_03645	PF00482	Type II secretion system (T2SS), protein F
BED34_03650	PF00437	Type II/IV secretion system protein
BED34_03665	PF00263	BED34_03665
BED34_03665	PF13629	BED34_03665
BED34_03675	PF01478	Type IV leader peptidase family
BED34_03685	PF00486	Transcriptional regulatory protein, C terminal
BED34_03690	PF13532	2OG-Fe(II) oxygenase superfamily
BED34_03695	PF00873	AcrB/AcrD/AcrF family
BED34_03700	PF13683	BED34_03700
BED34_03720	PF12833	Helix-turn-helix domain
BED34_03725	PF01527	Transposase
BED34_03735	PF02321	Outer membrane efflux protein
BED34_03745	PF00005	ABC transporter
BED34_03760	PF00665	Integrase core domain
BED34_03765	PF01527	Transposase
BED34_03775	PF00756	Putative esterase
BED34_03775	PF11806	Domain of unknown function (DUF3327)
BED34_03780	PF00005	ABC transporter
BED34_03785	PF01032	FecCD transport family
BED34_03790	PF01032	FecCD transport family
BED34_03795	PF01497	Periplasmic binding protein
BED34_03805	PF01370	NAD dependent epimerase/dehydratase family
BED34_03810	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BED34_03810	PF02203	Tar ligand binding domain homologue
BED34_03820	PF00771	FHIPEP family
BED34_03825	PF01312	FlhB HrpN YscU SpaS Family
BED34_03830	PF01311	BED34_03830
BED34_03835	PF01313	BED34_03835
BED34_03840	PF00813	BED34_03840
BED34_03845	PF01052	Surface presentation of antigens (SPOA)
BED34_03850	PF01052	Surface presentation of antigens (SPOA)
BED34_03855	PF00158	Sigma-54 interaction domain
BED34_03855	PF02954	Bacterial regulatory protein, Fis family
BED34_03860	PF02049	BED34_03860
BED34_03870	PF01706	FliG C-terminal domain
BED34_03870	PF14841	FliG middle domain
BED34_03870	PF14842	FliG N-terminal domain
BED34_03875	PF02108	BED34_03875
BED34_03875	PF09811	BED34_03875
BED34_03880	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
BED34_03885	PF02050	Flagellar FliJ protein
BED34_03890	PF05130	FlgN protein
BED34_03895	PF04316	Anti-sigma-28 factor, FlgM
BED34_03900	PF13144	SAF-like
BED34_03905	PF00460	Flagella basal body rod protein
BED34_03910	PF00460	Flagella basal body rod protein
BED34_03910	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
BED34_03915	PF03963	BED34_03915
BED34_03915	PF13860	FlgD Ig-like domain
BED34_03915	PF13861	FlgD Tudor-like domain
BED34_03920	PF00460	Flagella basal body rod protein
BED34_03920	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
BED34_03920	PF07559	Flagellar basal body protein FlaE
BED34_03925	PF00460	Flagella basal body rod protein
BED34_03925	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
BED34_03930	PF00460	Flagella basal body rod protein
BED34_03930	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
BED34_03935	PF02107	BED34_03935
BED34_03940	PF02119	BED34_03940
BED34_03945	PF10135	BED34_03945
BED34_03950	PF00460	Flagella basal body rod protein
BED34_03950	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
BED34_03955	PF00669	Bacterial flagellin N-terminal helical region
BED34_03955	PF00700	Bacterial flagellin C-terminal helical region
BED34_03975	PF00669	Bacterial flagellin N-terminal helical region
BED34_03975	PF00700	Bacterial flagellin C-terminal helical region
BED34_03985	PF02561	Flagellar protein FliS
BED34_04000	PF03748	BED34_04000
BED34_04005	PF04539	Sigma-70 region 3
BED34_04005	PF04542	Sigma-70 region 2
BED34_04005	PF04545	Sigma-70, region 4
BED34_04010	PF01618	BED34_04010
BED34_04015	PF00691	OmpA family
BED34_04015	PF13677	BED34_04015
BED34_04020	PF05433	BED34_04020
BED34_04025	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
BED34_04025	PF14720	NiFe/NiFeSe hydrogenase small subunit C-terminal
BED34_04030	PF13247	4Fe-4S dicluster domain
BED34_04040	PF00374	Nickel-dependent hydrogenase
BED34_04045	PF01750	Hydrogenase maturation protease
BED34_04050	PF11939	Protein of unknown function (DUF3457)
BED34_04055	PF01155	Hydrogenase expression/synthesis hypA family
BED34_04060	PF02492	CobW/HypB/UreG, nucleotide-binding domain
BED34_04065	PF01455	HupF/HypC family
BED34_04070	PF01924	Hydrogenase formation hypA family
BED34_04075	PF00586	AIR synthase related protein, N-terminal domain
BED34_04075	PF02769	AIR synthase related protein, C-terminal domain
BED34_04080	PF00708	Acylphosphatase
BED34_04080	PF01300	Telomere recombination
BED34_04080	PF07503	HypF finger
BED34_04085	PF02661	Fic/DOC family
BED34_04085	PF08279	HTH domain
BED34_04090	PF02110	Hydroxyethylthiazole kinase family
BED34_04100	PF11769	BED34_04100
BED34_04105	PF00563	EAL domain
BED34_04105	PF00989	PAS fold
BED34_04105	PF00990	GGDEF domain
BED34_04105	PF05228	BED34_04105
BED34_04110	PF16576	BED34_04110
BED34_04125	PF00083	Sugar (and other) transporter
BED34_04125	PF08946	Osmosensory transporter coiled coil
BED34_04135	PF00857	Isochorismatase family
BED34_04140	PF01895	PhoU domain
BED34_04140	PF02690	BED34_04140
BED34_04145	PF01156	Inosine-uridine preferring nucleoside hydrolase
BED34_04150	PF00356	Bacterial regulatory proteins, lacI family
BED34_04150	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
BED34_04155	PF01548	BED34_04155
BED34_04155	PF02371	BED34_04155
BED34_04160	PF00083	Sugar (and other) transporter
BED34_04170	PF00155	Aminotransferase class I and II
BED34_04170	PF00392	Bacterial regulatory proteins, gntR family
BED34_04180	PF00891	O-methyltransferase
BED34_04185	PF00891	O-methyltransferase
BED34_04190	PF01497	Periplasmic binding protein
BED34_04195	PF01032	FecCD transport family
BED34_04200	PF01032	FecCD transport family
BED34_04210	PF00557	Metallopeptidase family M24
BED34_04215	PF11903	BED34_04215
BED34_04225	PF17090	BED34_04225
BED34_04230	PF13437	HlyD family secretion protein
BED34_04230	PF13533	Biotin-lipoyl like
BED34_04235	PF04632	BED34_04235
BED34_04245	PF01276	Orn/Lys/Arg decarboxylase, major domain
BED34_04245	PF03709	Orn/Lys/Arg decarboxylase, N-terminal domain
BED34_04245	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
BED34_04250	PF13520	Amino acid permease
BED34_04260	PF02275	Linear amide C-N hydrolases, choloylglycine hydrolase family
BED34_04270	PF03811	BED34_04270
BED34_04270	PF12759	BED34_04270
BED34_04275	PF07514	Putative helicase
BED34_04275	PF07515	Protein of unknown function (DUF1528)
BED34_04290	PF00589	Phage integrase family
BED34_04305	PF01276	Orn/Lys/Arg decarboxylase, major domain
BED34_04305	PF03709	Orn/Lys/Arg decarboxylase, N-terminal domain
BED34_04305	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
BED34_04310	PF01925	BED34_04310
BED34_04315	PF01464	Transglycosylase SLT domain
BED34_04315	PF11873	Domain of unknown function (DUF3393)
BED34_04320	PF04362	Bacterial Fe(2+) trafficking
BED34_04325	PF00633	Helix-hairpin-helix motif
BED34_04325	PF00730	HhH-GPD superfamily base excision DNA repair protein
BED34_04325	PF10576	Iron-sulfur binding domain of endonuclease III
BED34_04325	PF14815	NUDIX domain
BED34_04330	PF02390	Putative methyltransferase
BED34_04335	PF04320	BED34_04335
BED34_04340	PF04960	Glutaminase
BED34_04345	PF11101	BED34_04345
BED34_04350	PF04055	Radical SAM superfamily
BED34_04350	PF06969	HemN C-terminal domain
BED34_04355	PF01725	Ham1 family
BED34_04360	PF02594	Uncharacterised ACR, YggU family COG1872
BED34_04365	PF02325	BED34_04365
BED34_04370	PF03807	NADP oxidoreductase coenzyme F420-dependent
BED34_04370	PF14748	Pyrroline-5-carboxylate reductase dimerisation
BED34_04375	PF01168	Alanine racemase, N-terminal domain
BED34_04380	PF00437	Type II/IV secretion system protein
BED34_04385	PF04371	Porphyromonas-type peptidyl-arginine deiminase
BED34_04390	PF00795	Carbon-nitrogen hydrolase
BED34_04395	PF03652	Uncharacterised protein family (UPF0081)
BED34_04400	PF02622	Uncharacterized ACR, COG1678
BED34_04405	PF02951	Prokaryotic glutathione synthetase, N-terminal domain
BED34_04405	PF02955	Prokaryotic glutathione synthetase, ATP-grasp domain
BED34_04410	PF04452	RNA methyltransferase
BED34_04415	PF04231	Endonuclease I
BED34_04420	PF10263	BED34_04420
BED34_04420	PF17283	BED34_04420
BED34_04425	PF01022	Bacterial regulatory protein, arsR family
BED34_04430	PF00872	BED34_04430
BED34_04435	PF04143	BED34_04435
BED34_04440	PF04143	BED34_04440
BED34_04445	PF00438	S-adenosylmethionine synthetase, N-terminal domain
BED34_04445	PF02772	S-adenosylmethionine synthetase, central domain
BED34_04445	PF02773	S-adenosylmethionine synthetase, C-terminal domain
BED34_04450	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
BED34_04455	PF00355	Rieske [2Fe-2S] domain
BED34_04460	PF01435	Peptidase family M48
BED34_04465	PF00456	Transketolase, thiamine diphosphate binding domain
BED34_04465	PF02779	Transketolase, pyrimidine binding domain
BED34_04465	PF02780	Transketolase, C-terminal domain
BED34_04470	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
BED34_04470	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
BED34_04475	PF00162	Phosphoglycerate kinase
BED34_04480	PF01116	Fructose-bisphosphate aldolase class-II
BED34_04485	PF00102	Protein-tyrosine phosphatase
BED34_04490	PF00924	Mechanosensitive ion channel
BED34_04490	PF05552	Conserved TM helix
BED34_04495	PF01548	BED34_04495
BED34_04495	PF02371	BED34_04495
BED34_04500	PF01810	BED34_04500
BED34_04505	PF04402	Protein of unknown function (DUF541)
BED34_04515	PF06026	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
BED34_04520	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
BED34_04520	PF01842	ACT domain
BED34_04520	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
BED34_04525	PF13518	Helix-turn-helix domain
BED34_04555	PF04055	Radical SAM superfamily
BED34_04555	PF13394	4Fe-4S single cluster domain
BED34_04575	PF01242	6-pyruvoyl tetrahydropterin synthase
BED34_04580	PF00175	Oxidoreductase NAD-binding domain
BED34_04580	PF00258	Flavodoxin
BED34_04580	PF00667	FAD binding domain
BED34_04585	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
BED34_04585	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
BED34_04590	PF01507	Phosphoadenosine phosphosulfate reductase family
BED34_04595	PF15919	BED34_04595
BED34_04600	PF07927	YcfA-like protein
BED34_04605	PF04389	Peptidase family M28
BED34_04610	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
BED34_04610	PF10414	Sirohaem synthase dimerisation region
BED34_04610	PF13241	Putative NAD(P)-binding
BED34_04610	PF14824	Sirohaem biosynthesis protein central
BED34_04615	PF01507	Phosphoadenosine phosphosulfate reductase family
BED34_04620	PF00009	Elongation factor Tu GTP binding domain
BED34_04625	PF01583	Adenylylsulphate kinase
BED34_04630	PF12084	BED34_04630
BED34_04635	PF04977	Septum formation initiator
BED34_04640	PF01128	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
BED34_04645	PF02542	YgbB family
BED34_04650	PF01142	tRNA pseudouridine synthase D (TruD)
BED34_04655	PF01975	Survival protein SurE
BED34_04660	PF01135	Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
BED34_04665	PF01476	LysM domain
BED34_04665	PF01551	Peptidase family M23
BED34_04670	PF00140	Sigma-70 factor, region 1
BED34_04670	PF04539	Sigma-70 region 3
BED34_04670	PF04542	Sigma-70 region 2
BED34_04670	PF04545	Sigma-70, region 4
BED34_04675	PF00488	MutS domain V
BED34_04675	PF01624	MutS domain I
BED34_04675	PF05188	MutS domain II
BED34_04675	PF05190	MutS family domain IV
BED34_04675	PF05192	MutS domain III
BED34_04680	PF04932	BED34_04680
BED34_04680	PF11846	BED34_04680
BED34_04680	PF15864	BED34_04680
BED34_04685	PF04703	FaeA-like protein
BED34_04690	PF00419	Fimbrial protein
BED34_04700	PF00577	Outer membrane usher protein
BED34_04700	PF13953	PapC C-terminal domain
BED34_04700	PF13954	PapC N-terminal domain
BED34_04705	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
BED34_04705	PF02753	Pili assembly chaperone PapD, C-terminal domain
BED34_04710	PF00419	Fimbrial protein
BED34_04715	PF00419	Fimbrial protein
BED34_04720	PF00419	Fimbrial protein
BED34_04730	PF15959	BED34_04730
BED34_04735	PF01323	DSBA-like thioredoxin domain
BED34_04745	PF00005	ABC transporter
BED34_04745	PF00664	ABC transporter transmembrane region
BED34_04745	PF03412	Peptidase C39 family
BED34_04750	PF16576	BED34_04750
BED34_04755	PF00005	ABC transporter
BED34_04755	PF02687	BED34_04755
BED34_04755	PF12704	MacB-like periplasmic core domain
BED34_04760	PF02321	Outer membrane efflux protein
BED34_04765	PF00109	Beta-ketoacyl synthase, N-terminal domain
BED34_04765	PF02801	Beta-ketoacyl synthase, C-terminal domain
BED34_04770	PF01575	MaoC like domain
BED34_04775	PF00550	Phosphopantetheine attachment site
BED34_04780	PF13561	Enoyl-(Acyl carrier protein) reductase
BED34_04785	PF00155	Aminotransferase class I and II
BED34_04790	PF00034	Cytochrome c
BED34_04790	PF03150	Di-haem cytochrome c peroxidase
BED34_04790	PF14376	BED34_04790
BED34_04795	PF07883	Cupin domain
BED34_04800	PF00009	Elongation factor Tu GTP binding domain
BED34_04800	PF00679	Elongation factor G C-terminus
BED34_04800	PF03144	Elongation factor Tu domain 2
BED34_04800	PF03764	Elongation factor G, domain IV
BED34_04800	PF14492	Elongation Factor G, domain II
BED34_04805	PF12840	Helix-turn-helix domain
BED34_04810	PF00107	Zinc-binding dehydrogenase
BED34_04810	PF08240	Alcohol dehydrogenase GroES-like domain
BED34_04815	PF03613	BED34_04815
BED34_04820	PF03609	BED34_04820
BED34_04830	PF03610	PTS system fructose IIA component
BED34_04835	PF04198	Putative sugar-binding domain
BED34_04840	PF00795	Carbon-nitrogen hydrolase
BED34_04845	PF03861	ANTAR domain
BED34_04850	PF13433	Periplasmic binding protein domain
BED34_04855	PF03069	Acetamidase/Formamidase family
BED34_04860	PF00005	ABC transporter
BED34_04865	PF00005	ABC transporter
BED34_04870	PF02653	BED34_04870
BED34_04875	PF02653	BED34_04875
BED34_04880	PF13433	Periplasmic binding protein domain
BED34_04885	PF05681	BED34_04885
BED34_04885	PF05683	Fumarase C-terminus
BED34_04890	PF00384	Molybdopterin oxidoreductase
BED34_04890	PF01568	Molydopterin dinucleotide binding domain
BED34_04890	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
BED34_04895	PF12800	4Fe-4S binding domain
BED34_04895	PF13247	4Fe-4S dicluster domain
BED34_04900	PF04976	BED34_04900
BED34_04905	PF02613	Nitrate reductase delta subunit
BED34_04910	PF01548	BED34_04910
BED34_04910	PF02371	BED34_04910
BED34_04915	PF07690	Major Facilitator Superfamily
BED34_04920	PF02464	Competence-damaged protein
BED34_04925	PF00154	recA bacterial DNA recombination protein
BED34_04930	PF02631	RecX family
BED34_04935	PF01411	tRNA synthetases class II (A)
BED34_04935	PF02272	DHHA1 domain
BED34_04935	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
BED34_04940	PF02599	Global regulator protein family
BED34_04960	PF13419	Haloacid dehalogenase-like hydrolase
BED34_04970	PF04262	Glutamate-cysteine ligase
BED34_04975	PF02664	S-Ribosylhomocysteinase (LuxS)
BED34_04980	PF03471	Transporter associated domain
BED34_04985	PF01548	BED34_04985
BED34_04985	PF02371	BED34_04985
BED34_04995	PF01578	BED34_04995
BED34_05000	PF00448	SRP54-type protein, GTPase domain
BED34_05000	PF02881	SRP54-type protein, helical bundle domain
BED34_05000	PF02978	Signal peptide binding domain
BED34_05005	PF00886	Ribosomal protein S16
BED34_05010	PF01782	RimM N-terminal domain
BED34_05010	PF05239	PRC-barrel domain
BED34_05015	PF01746	tRNA (Guanine-1)-methyltransferase
BED34_05020	PF01245	Ribosomal protein L19
BED34_05030	PF03605	BED34_05030
BED34_05035	PF00072	Response regulator receiver domain
BED34_05035	PF04397	LytTr DNA-binding domain
BED34_05040	PF00793	DAHP synthetase I family
BED34_05045	PF01817	Chorismate mutase type II
BED34_05045	PF02153	Prephenate dehydrogenase
BED34_05050	PF00800	Prephenate dehydratase
BED34_05050	PF01817	Chorismate mutase type II
BED34_05055	PF01548	BED34_05055
BED34_05055	PF02371	BED34_05055
BED34_05060	PF00004	ATPase family associated with various cellular activities (AAA)
BED34_05060	PF02861	Clp amino terminal domain
BED34_05060	PF07724	AAA domain (Cdc48 subfamily)
BED34_05060	PF10431	C-terminal, D2-small domain, of ClpB protein
BED34_05065	PF02578	Multi-copper polyphenol oxidoreductase laccase
BED34_05070	PF00849	RNA pseudouridylate synthase
BED34_05070	PF01479	S4 domain
BED34_05075	PF13525	Outer membrane lipoprotein
BED34_05085	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
BED34_05090	PF00872	BED34_05090
BED34_05095	PF01548	BED34_05095
BED34_05095	PF02371	BED34_05095
BED34_05125	PF10043	BED34_05125
BED34_05130	PF13091	PLD-like domain
BED34_05135	PF00583	Acetyltransferase (GNAT) family
BED34_05135	PF13380	CoA binding domain
BED34_05135	PF13549	ATP-grasp domain
BED34_05135	PF13607	Succinyl-CoA ligase like flavodoxin domain
BED34_05140	PF03942	BED34_05140
BED34_05145	PF00085	Thioredoxin
BED34_05150	PF00588	SpoU rRNA Methylase family
BED34_05150	PF08032	RNA 2'-O ribose methyltransferase substrate binding
BED34_05155	PF07690	Major Facilitator Superfamily
BED34_05160	PF00529	HlyD family secretion protein
BED34_05160	PF16576	BED34_05160
BED34_05165	PF02321	Outer membrane efflux protein
BED34_05170	PF01047	MarR family
BED34_05175	PF05437	BED34_05175
BED34_05180	PF03591	BED34_05180
BED34_05185	PF07690	Major Facilitator Superfamily
BED34_05195	PF11533	Protein of unknown function (DUF3225)
BED34_05200	PF01425	Amidase
BED34_05205	PF13318	BED34_05205
BED34_05210	PF01380	SIS domain
BED34_05210	PF01418	Helix-turn-helix domain, rpiR family
BED34_05215	PF00497	Bacterial extracellular solute-binding proteins, family 3
BED34_05220	PF00528	Binding-protein-dependent transport system inner membrane component
BED34_05225	PF00528	Binding-protein-dependent transport system inner membrane component
BED34_05230	PF00005	ABC transporter
BED34_05245	PF00795	Carbon-nitrogen hydrolase
BED34_05250	PF00155	Aminotransferase class I and II
BED34_05255	PF00589	Phage integrase family
BED34_05255	PF12167	BED34_05255
BED34_05260	PF06806	Putative excisionase (DUF1233)
BED34_05265	PF05063	BED34_05265
BED34_05305	PF03837	BED34_05305
BED34_05310	PF12684	PDDEXK-like domain of unknown function (DUF3799)
BED34_05350	PF10965	BED34_05350
BED34_05355	PF15968	BED34_05355
BED34_05360	PF15969	BED34_05360
BED34_05365	PF00717	Peptidase S24-like
BED34_05365	PF01381	Helix-turn-helix
BED34_05370	PF09048	Cro
BED34_05375	PF05269	Bacteriophage CII protein
BED34_05385	PF04492	BED34_05385
BED34_05390	PF01695	IstB-like ATP binding protein
BED34_05405	PF04448	BED34_05405
BED34_05415	PF05772	NinB protein
BED34_05425	PF07102	Protein of unknown function (DUF1364)
BED34_05430	PF05866	Endodeoxyribonuclease RusA
BED34_05440	PF03589	Antitermination protein
BED34_05455	PF00959	Phage lysozyme
BED34_05460	PF03245	BED34_05460
BED34_05465	PF09669	BED34_05465
BED34_05470	PF11133	Head fiber protein
BED34_05495	PF06381	BED34_05495
BED34_05500	PF04233	BED34_05500
BED34_05510	PF09979	BED34_05510
BED34_05530	PF13262	BED34_05530
BED34_05550	PF11863	BED34_05550
BED34_05565	PF01464	Transglycosylase SLT domain
BED34_05595	PF06890	Bacteriophage Mu Gp45 protein
BED34_05605	PF04865	BED34_05605
BED34_05625	PF00596	Class II Aldolase and Adducin N-terminal domain
BED34_05635	PF03079	ARD/ARD' family
BED34_05640	PF01008	Initiation factor 2 subunit family
BED34_05645	PF01636	Phosphotransferase enzyme family
BED34_05650	PF03865	Haemolysin secretion/activation protein ShlB/FhaC/HecB
BED34_05650	PF08479	POTRA domain, ShlB-type
BED34_05665	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
BED34_05665	PF02770	Acyl-CoA dehydrogenase, middle domain
BED34_05665	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
BED34_05665	PF09317	BED34_05665
BED34_05670	PF13580	SIS domain
BED34_05675	PF13230	Glutamine amidotransferases class-II
BED34_05680	PF03734	L,D-transpeptidase catalytic domain
BED34_05685	PF05896	BED34_05685
BED34_05685	PF11973	BED34_05685
BED34_05690	PF03116	BED34_05690
BED34_05695	PF04205	FMN-binding domain
BED34_05700	PF02508	BED34_05700
BED34_05710	PF00111	2Fe-2S iron-sulfur cluster binding domain
BED34_05710	PF00175	Oxidoreductase NAD-binding domain
BED34_05710	PF00970	Oxidoreductase FAD-binding domain
BED34_05715	PF02424	ApbE family
BED34_05720	PF04400	BED34_05720
BED34_05725	PF03009	Glycerophosphoryl diester phosphodiesterase family
BED34_05730	PF01820	D-ala D-ala ligase N-terminus
BED34_05730	PF07478	D-ala D-ala ligase C-terminus
BED34_05735	PF08348	BED34_05735
BED34_05735	PF13309	BED34_05735
BED34_05740	PF00291	Pyridoxal-phosphate dependent enzyme
BED34_05750	PF00817	impB/mucB/samB family
BED34_05750	PF11798	IMS family HHH motif
BED34_05750	PF11799	impB/mucB/samB family C-terminal domain
BED34_05755	PF01546	Peptidase family M20/M25/M40
BED34_05755	PF07687	Peptidase dimerisation domain
BED34_05760	PF00156	Phosphoribosyl transferase domain
BED34_05765	PF01548	BED34_05765
BED34_05765	PF02371	BED34_05765
BED34_05770	PF06500	Alpha/beta hydrolase of unknown function (DUF1100)
BED34_05775	PF07417	Transcriptional regulator Crl
BED34_05780	PF00696	Amino acid kinase family
BED34_05780	PF01472	PUA domain
BED34_05785	PF00171	Aldehyde dehydrogenase family
BED34_05790	PF00392	Bacterial regulatory proteins, gntR family
BED34_05790	PF07702	UTRA domain
BED34_05795	PF00367	phosphotransferase system, EIIB
BED34_05795	PF02378	Phosphotransferase system, EIIC
BED34_05800	PF02056	Family 4 glycosyl hydrolase
BED34_05800	PF11975	Family 4 glycosyl hydrolase C-terminal domain
BED34_05805	PF07238	PilZ domain
BED34_05805	PF07317	Flagellar regulator YcgR
BED34_05810	PF06165	Glycosyltransferase family 36
BED34_05810	PF10091	Putative glucoamylase
BED34_05810	PF17167	BED34_05810
BED34_05820	PF00583	Acetyltransferase (GNAT) family
BED34_05825	PF08241	Methyltransferase domain
BED34_05830	PF07338	Protein of unknown function (DUF1471)
BED34_05845	PF00593	TonB dependent receptor
BED34_05845	PF07715	TonB-dependent Receptor Plug Domain
BED34_05850	PF01202	Shikimate kinase
BED34_05855	PF06865	Protein of unknown function (DUF1255)
BED34_05860	PF04381	Putative exonuclease, RdgC
BED34_05865	PF00480	ROK family
BED34_05870	PF13476	AAA domain
BED34_05870	PF13558	Putative exonuclease SbcCD, C subunit
BED34_05875	PF00149	Calcineurin-like phosphoesterase
BED34_05875	PF12320	Type 5 capsule protein repressor C-terminal domain
BED34_05880	PF00072	Response regulator receiver domain
BED34_05880	PF00486	Transcriptional regulatory protein, C terminal
BED34_05885	PF00512	His Kinase A (phospho-acceptor) domain
BED34_05885	PF00989	PAS fold
BED34_05885	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BED34_05885	PF11808	BED34_05885
BED34_05890	PF12849	PBP superfamily domain
BED34_05895	PF05525	BED34_05895
BED34_05900	PF00324	Amino acid permease
BED34_05905	PF00128	Alpha amylase, catalytic domain
BED34_05905	PF02903	Alpha amylase, N-terminal ig-like domain
BED34_05910	PF00106	short chain dehydrogenase
BED34_05915	PF01019	Gamma-glutamyltranspeptidase
BED34_05920	PF01848	BED34_05920
BED34_05925	PF00578	AhpC/TSA family
BED34_05925	PF10417	C-terminal domain of 1-Cys peroxiredoxin
BED34_05930	PF04336	BED34_05930
BED34_05935	PF02547	Queuosine biosynthesis protein
BED34_05940	PF12697	Alpha/beta hydrolase family
BED34_05945	PF01702	Queuine tRNA-ribosyltransferase
BED34_05950	PF02699	Preprotein translocase subunit
BED34_05955	PF02355	Protein export membrane protein
BED34_05955	PF07549	SecD/SecF GG Motif
BED34_05955	PF13721	SecD export protein N-terminal TM region
BED34_05960	PF02355	Protein export membrane protein
BED34_05960	PF07549	SecD/SecF GG Motif
BED34_05975	PF03477	ATP cone domain
BED34_05980	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
BED34_05980	PF01872	RibD C-terminal domain
BED34_05985	PF00885	6,7-dimethyl-8-ribityllumazine synthase
BED34_05990	PF01029	NusB family
BED34_05995	PF00586	AIR synthase related protein, N-terminal domain
BED34_05995	PF02769	AIR synthase related protein, C-terminal domain
BED34_06000	PF04608	Phosphatidylglycerophosphatase A
BED34_06005	PF01548	BED34_06005
BED34_06005	PF02371	BED34_06005
BED34_06010	PF02779	Transketolase, pyrimidine binding domain
BED34_06010	PF02780	Transketolase, C-terminal domain
BED34_06010	PF13292	1-deoxy-D-xylulose-5-phosphate synthase
BED34_06015	PF00348	Polyprenyl synthetase
BED34_06020	PF02609	Exonuclease VII small subunit
BED34_06025	PF02568	Thiamine biosynthesis protein (ThiI)
BED34_06025	PF02926	THUMP domain
BED34_06030	PF01965	DJ-1/PfpI family
BED34_06035	PF02558	Ketopantoate reductase PanE/ApbA
BED34_06035	PF08546	Ketopantoate reductase PanE/ApbA C terminal
BED34_06040	PF04461	Protein of unknown function (DUF520)
BED34_06045	PF07690	Major Facilitator Superfamily
BED34_06050	PF01040	UbiA prenyltransferase family
BED34_06055	PF03626	BED34_06055
BED34_06060	PF00510	Cytochrome c oxidase subunit III
BED34_06065	PF00115	Cytochrome C and Quinol oxidase polypeptide I
BED34_06070	PF00116	Cytochrome C oxidase subunit II, periplasmic domain
BED34_06070	PF06481	COX Aromatic Rich Motif
BED34_06075	PF03502	Nucleoside-specific channel-forming protein, Tsx
BED34_06080	PF07690	Major Facilitator Superfamily
BED34_06085	PF03923	BED34_06085
BED34_06085	PF08139	BED34_06085
BED34_06090	PF01722	BolA-like protein
BED34_06100	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
BED34_06100	PF05697	Bacterial trigger factor protein (TF)
BED34_06100	PF05698	Bacterial trigger factor protein (TF) C-terminus
BED34_06105	PF00574	Clp protease
BED34_06110	PF06689	ClpX C4-type zinc finger
BED34_06110	PF07724	AAA domain (Cdc48 subfamily)
BED34_06110	PF10431	C-terminal, D2-small domain, of ClpB protein
BED34_06115	PF00004	ATPase family associated with various cellular activities (AAA)
BED34_06115	PF02190	ATP-dependent protease La (LON) domain
BED34_06115	PF05362	Lon protease (S16) C-terminal proteolytic domain
BED34_06120	PF00216	Bacterial DNA-binding protein
BED34_06125	PF13145	PPIC-type PPIASE domain
BED34_06125	PF13624	SurA N-terminal domain
BED34_06130	PF12836	Helix-hairpin-helix motif
BED34_06135	PF13279	Thioesterase-like superfamily
BED34_06140	PF06508	Queuosine biosynthesis protein QueC
BED34_06145	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
BED34_06145	PF12793	BED34_06145
BED34_06150	PF08282	haloacid dehalogenase-like hydrolase
BED34_06155	PF00291	Pyridoxal-phosphate dependent enzyme
BED34_06160	PF01037	AsnC family
BED34_06160	PF13412	Winged helix-turn-helix DNA-binding
BED34_06165	PF00005	ABC transporter
BED34_06165	PF00664	ABC transporter transmembrane region
BED34_06170	PF00005	ABC transporter
BED34_06170	PF00664	ABC transporter transmembrane region
BED34_06175	PF00543	Nitrogen regulatory protein P-II
BED34_06180	PF00909	Ammonium Transporter Family
BED34_06185	PF13622	Thioesterase-like superfamily
BED34_06190	PF09619	Type III secretion system lipoprotein chaperone (YscW)
BED34_06195	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
BED34_06205	PF05321	Haemolysin expression modulating protein
BED34_06210	PF10757	BED34_06210
BED34_06220	PF00005	ABC transporter
BED34_06225	PF00950	BED34_06225
BED34_06230	PF01297	Periplasmic solute binding protein family
BED34_06235	PF00444	Ribosomal protein L36
BED34_06240	PF01197	Ribosomal protein L31
BED34_06245	PF10797	BED34_06245
BED34_06250	PF10941	BED34_06250
BED34_06255	PF01676	Metalloenzyme superfamily
BED34_06260	PF01168	Alanine racemase, N-terminal domain
BED34_06265	PF00874	PRD domain
BED34_06270	PF00873	AcrB/AcrD/AcrF family
BED34_06275	PF00529	HlyD family secretion protein
BED34_06275	PF16576	BED34_06275
BED34_06280	PF00440	Bacterial regulatory proteins, tetR family
BED34_06280	PF08361	MAATS-type transcriptional repressor, C-terminal region
BED34_06285	PF02635	DsrE/DsrF-like family
BED34_06295	PF10689	BED34_06295
BED34_06300	PF07445	Primosomal replication protein priB and priC
BED34_06305	PF04304	BED34_06305
BED34_06310	PF00156	Phosphoribosyl transferase domain
BED34_06315	PF12168	BED34_06315
BED34_06315	PF12169	DNA polymerase III subunits gamma and tau domain III
BED34_06315	PF12170	DNA polymerase III tau subunit V interacting with alpha
BED34_06315	PF13177	DNA polymerase III, delta subunit
BED34_06320	PF02575	YbaB/EbfC DNA-binding family
BED34_06325	PF02132	RecR protein
BED34_06325	PF13662	Toprim domain
BED34_06330	PF00183	Hsp90 protein
BED34_06330	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BED34_06335	PF00406	Adenylate kinase
BED34_06335	PF05191	Adenylate kinase, active site lid
BED34_06340	PF00762	Ferrochelatase
BED34_06350	PF00535	Glycosyl transferase family 2
BED34_06355	PF00535	Glycosyl transferase family 2
BED34_06360	PF00534	Glycosyl transferases group 1
BED34_06360	PF13439	Glycosyltransferase Family 4
BED34_06365	PF00534	Glycosyl transferases group 1
BED34_06370	PF00953	Glycosyl transferase family 4
BED34_06375	PF02719	Polysaccharide biosynthesis protein
BED34_06380	PF00534	Glycosyl transferases group 1
BED34_06380	PF13439	Glycosyltransferase Family 4
BED34_06385	PF01370	NAD dependent epimerase/dehydratase family
BED34_06390	PF00294	pfkB family carbohydrate kinase
BED34_06395	PF00999	Sodium/hydrogen exchanger family
BED34_06395	PF02254	TrkA-N domain
BED34_06400	PF07690	Major Facilitator Superfamily
BED34_06415	PF04073	Aminoacyl-tRNA editing domain
BED34_06420	PF01963	BED34_06420
BED34_06425	PF00122	E1-E2 ATPase
BED34_06425	PF00403	Heavy-metal-associated domain
BED34_06425	PF00702	haloacid dehalogenase-like hydrolase
BED34_06430	PF13411	MerR HTH family regulatory protein
BED34_06435	PF01957	NfeD-like C-terminal, partner-binding
BED34_06440	PF01145	SPFH domain / Band 7 family
BED34_06445	PF00085	Thioredoxin
BED34_06445	PF14559	Tetratricopeptide repeat
BED34_06445	PF14561	Tetratricopeptide repeat
BED34_06450	PF00106	short chain dehydrogenase
BED34_06455	PF13472	GDSL-like Lipase/Acylhydrolase family
BED34_06460	PF00005	ABC transporter
BED34_06465	PF02687	BED34_06465
BED34_06470	PF02222	ATP-grasp domain
BED34_06475	PF00731	AIR carboxylase
BED34_06480	PF00149	Calcineurin-like phosphoesterase
BED34_06485	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
BED34_06490	PF01406	tRNA synthetases class I (C) catalytic domain
BED34_06490	PF09190	DALR domain
BED34_06495	PF13275	S4 domain
BED34_06500	PF00763	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
BED34_06500	PF02882	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
BED34_06510	PF00589	Phage integrase family
BED34_06515	PF05063	BED34_06515
BED34_06555	PF03837	BED34_06555
BED34_06560	PF12684	PDDEXK-like domain of unknown function (DUF3799)
BED34_06600	PF00717	Peptidase S24-like
BED34_06610	PF05269	Bacteriophage CII protein
BED34_06625	PF01695	IstB-like ATP binding protein
BED34_06640	PF04448	BED34_06640
BED34_06650	PF05772	NinB protein
BED34_06660	PF07102	Protein of unknown function (DUF1364)
BED34_06665	PF05866	Endodeoxyribonuclease RusA
BED34_06675	PF03589	Antitermination protein
BED34_06685	PF16083	BED34_06685
BED34_06690	PF13539	D-alanyl-D-alanine carboxypeptidase
BED34_06695	PF10721	BED34_06695
BED34_06710	PF06440	DNA polymerase III, theta subunit
BED34_06730	PF05876	BED34_06730
BED34_06735	PF02831	gpW
BED34_06740	PF05136	BED34_06740
BED34_06745	PF01343	Peptidase family S49
BED34_06755	PF02924	Bacteriophage lambda head decoration protein D
BED34_06760	PF03864	Phage major capsid protein E
BED34_06780	PF10948	BED34_06780
BED34_06785	PF04984	Phage tail sheath protein
BED34_06785	PF17482	BED34_06785
BED34_06790	PF10618	BED34_06790
BED34_06795	PF10109	BED34_06795
BED34_06800	PF01464	Transglycosylase SLT domain
BED34_06805	PF07157	BED34_06805
BED34_06810	PF05954	Phage late control gene D protein (GPD)
BED34_06815	PF06890	Bacteriophage Mu Gp45 protein
BED34_06820	PF07409	BED34_06820
BED34_06825	PF04865	BED34_06825
BED34_06830	PF10076	BED34_06830
BED34_06845	PF01757	BED34_06845
BED34_06850	PF00589	Phage integrase family
BED34_06855	PF05063	BED34_06855
BED34_06935	PF10965	BED34_06935
BED34_06940	PF15968	BED34_06940
BED34_06945	PF15969	BED34_06945
BED34_06950	PF00717	Peptidase S24-like
BED34_06950	PF01381	Helix-turn-helix
BED34_06955	PF15943	BED34_06955
BED34_06960	PF05269	Bacteriophage CII protein
BED34_06965	PF02767	DNA polymerase III beta subunit, central domain
BED34_06970	PF04492	BED34_06970
BED34_06975	PF00772	DnaB-like helicase N terminal domain
BED34_06975	PF03796	DnaB-like helicase C terminal domain
BED34_07000	PF15944	BED34_07000
BED34_07005	PF07105	BED34_07005
BED34_07015	PF01844	HNH endonuclease
BED34_07020	PF10765	Protein of unknown function (DUF2591)
BED34_07025	PF00149	Calcineurin-like phosphoesterase
BED34_07035	PF05766	BED34_07035
BED34_07045	PF06530	BED34_07045
BED34_07060	PF16083	BED34_07060
BED34_07065	PF00959	Phage lysozyme
BED34_07070	PF03245	BED34_07070
BED34_07075	PF04383	KilA-N domain
BED34_07095	PF10045	BED34_07095
BED34_07105	PF13264	BED34_07105
BED34_07115	PF11651	P22 coat protein - gene protein 5
BED34_07160	PF03869	Arc-like DNA binding domain
BED34_07165	PF02498	BED34_07165
BED34_07170	PF03374	BED34_07170
BED34_07170	PF04383	KilA-N domain
BED34_07210	PF04865	BED34_07210
BED34_07230	PF13356	Domain of unknown function (DUF4102)
BED34_07235	PF00589	Phage integrase family
BED34_07255	PF02661	Fic/DOC family
BED34_07255	PF13784	Fic/DOC family N-terminal
BED34_07265	PF05973	BED34_07265
BED34_07270	PF05930	Prophage CP4-57 regulatory protein (AlpA)
BED34_07320	PF00072	Response regulator receiver domain
BED34_07320	PF00486	Transcriptional regulatory protein, C terminal
BED34_07325	PF01738	Dienelactone hydrolase family
BED34_07330	PF01548	BED34_07330
BED34_07330	PF02371	BED34_07330
BED34_07340	PF08007	Cupin superfamily protein
BED34_07350	PF01977	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
BED34_07355	PF00005	ABC transporter
BED34_07355	PF00664	ABC transporter transmembrane region
BED34_07360	PF03992	Antibiotic biosynthesis monooxygenase
BED34_07365	PF08971	Glycogen synthesis protein
BED34_07370	PF00149	Calcineurin-like phosphoesterase
BED34_07385	PF00313	'Cold-shock' DNA-binding domain
BED34_07390	PF00313	'Cold-shock' DNA-binding domain
BED34_07395	PF02537	BED34_07395
BED34_07400	PF00990	GGDEF domain
BED34_07400	PF05230	BED34_07400
BED34_07405	PF02416	mttA/Hcf106 family
BED34_07410	PF04055	Radical SAM superfamily
BED34_07410	PF16881	BED34_07410
BED34_07415	PF03099	Biotin/lipoate A/B protein ligase family
BED34_07420	PF04359	Protein of unknown function (DUF493)
BED34_07425	PF00768	D-alanyl-D-alanine carboxypeptidase
BED34_07425	PF07943	Penicillin-binding protein 5, C-terminal domain
BED34_07430	PF03330	Rare lipoprotein A (RlpA)-like double-psi beta-barrel
BED34_07430	PF05036	Sporulation related domain
BED34_07435	PF01098	BED34_07435
BED34_07440	PF00905	Penicillin binding protein transpeptidase domain
BED34_07440	PF03717	Penicillin-binding Protein dimerisation domain
BED34_07445	PF02590	Predicted SPOUT methyltransferase
BED34_07450	PF02410	Oligomerisation domain
BED34_07455	PF01467	Cytidylyltransferase
BED34_07460	PF06144	DNA polymerase III, delta subunit
BED34_07460	PF14840	Processivity clamp loader gamma complex DNA pol III C-term
BED34_07465	PF04390	Lipopolysaccharide-assembly
BED34_07470	PF00133	tRNA synthetases class I (I, L, M and V)
BED34_07470	PF08264	Anticodon-binding domain of tRNA
BED34_07470	PF13603	Leucyl-tRNA synthetase, Domain 2
BED34_07475	PF07295	BED34_07475
BED34_07480	PF00005	ABC transporter
BED34_07485	PF00528	Binding-protein-dependent transport system inner membrane component
BED34_07490	PF00528	Binding-protein-dependent transport system inner membrane component
BED34_07495	PF00497	Bacterial extracellular solute-binding proteins, family 3
BED34_07500	PF01243	Pyridoxamine 5'-phosphate oxidase
BED34_07505	PF00795	Carbon-nitrogen hydrolase
BED34_07510	PF00571	CBS domain
BED34_07510	PF03471	Transporter associated domain
BED34_07520	PF02562	PhoH-like protein
BED34_07525	PF00919	Uncharacterized protein family UPF0004
BED34_07525	PF01938	TRAM domain
BED34_07525	PF04055	Radical SAM superfamily
BED34_07530	PF01494	FAD binding domain
BED34_07565	PF00733	Asparagine synthase
BED34_07565	PF13537	Glutamine amidotransferase domain
BED34_07570	PF13242	HAD-hyrolase-like
BED34_07570	PF13344	Haloacid dehalogenase-like hydrolase
BED34_07575	PF00480	ROK family
BED34_07575	PF01047	MarR family
BED34_07580	PF01979	Amidohydrolase family
BED34_07585	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
BED34_07595	PF00749	tRNA synthetases class I (E and Q), catalytic domain
BED34_07595	PF03950	tRNA synthetases class I (E and Q), anti-codon binding domain
BED34_07600	PF03573	outer membrane porin, OprD family
BED34_07605	PF13982	BED34_07605
BED34_07610	PF00728	Glycosyl hydrolase family 20, catalytic domain
BED34_07610	PF02838	Glycosyl hydrolase family 20, domain 2
BED34_07610	PF03173	Putative carbohydrate binding domain
BED34_07610	PF03174	Chitobiase/beta-hexosaminidase C-terminal domain
BED34_07615	PF01475	Ferric uptake regulator family
BED34_07620	PF00258	Flavodoxin
BED34_07625	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BED34_07625	PF02203	Tar ligand binding domain homologue
BED34_07630	PF01402	Ribbon-helix-helix protein, copG family
BED34_07635	PF12697	Alpha/beta hydrolase family
BED34_07640	PF03925	SeqA protein
BED34_07640	PF17206	BED34_07640
BED34_07645	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
BED34_07645	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
BED34_07645	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
BED34_07645	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
BED34_07655	PF00892	EamA-like transporter family
BED34_07660	PF00072	Response regulator receiver domain
BED34_07660	PF00486	Transcriptional regulatory protein, C terminal
BED34_07670	PF02669	BED34_07670
BED34_07675	PF00122	E1-E2 ATPase
BED34_07675	PF00702	haloacid dehalogenase-like hydrolase
BED34_07680	PF03814	BED34_07680
BED34_07685	PF09604	BED34_07685
BED34_07690	PF10725	BED34_07690
BED34_07700	PF02794	BED34_07700
BED34_07710	PF08349	BED34_07710
BED34_07715	PF00875	DNA photolyase
BED34_07715	PF03441	FAD binding domain of DNA photolyase
BED34_07720	PF02112	BED34_07720
BED34_07725	PF01784	NIF3 (NGG1p interacting factor 3)
BED34_07730	PF02682	Allophanate hydrolase subunit 1
BED34_07735	PF02626	Allophanate hydrolase subunit 2
BED34_07740	PF03746	LamB/YcsF family
BED34_07745	PF06149	BED34_07745
BED34_07750	PF06166	BED34_07750
BED34_07755	PF01470	Pyroglutamyl peptidase
BED34_07760	PF00285	Citrate synthase
BED34_07765	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
BED34_07775	PF00890	FAD binding domain
BED34_07775	PF02910	Fumarate reductase flavoprotein C-term
BED34_07780	PF13085	2Fe-2S iron-sulfur cluster binding domain
BED34_07780	PF13534	4Fe-4S dicluster domain
BED34_07785	PF00676	Dehydrogenase E1 component
BED34_07785	PF02779	Transketolase, pyrimidine binding domain
BED34_07785	PF16078	BED34_07785
BED34_07785	PF16870	BED34_07785
BED34_07790	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
BED34_07790	PF00364	Biotin-requiring enzyme
BED34_07790	PF02817	e3 binding domain
BED34_07795	PF00549	CoA-ligase
BED34_07795	PF08442	ATP-grasp domain
BED34_07800	PF00549	CoA-ligase
BED34_07800	PF02629	CoA binding domain
BED34_07805	PF00149	Calcineurin-like phosphoesterase
BED34_07805	PF02872	5'-nucleotidase, C-terminal domain
BED34_07810	PF01654	BED34_07810
BED34_07815	PF02322	BED34_07815
BED34_07820	PF08173	BED34_07820
BED34_07825	PF09600	BED34_07825
BED34_07830	PF03061	Thioesterase superfamily
BED34_07835	PF01618	BED34_07835
BED34_07840	PF02472	Biopolymer transport protein ExbD/TolR
BED34_07845	PF06519	TolA C-terminal
BED34_07850	PF04052	TolB amino-terminal domain
BED34_07850	PF07676	WD40-like Beta Propeller Repeat
BED34_07855	PF00691	OmpA family
BED34_07860	PF13174	Tetratricopeptide repeat
BED34_07860	PF13432	Tetratricopeptide repeat
BED34_07860	PF16331	BED34_07860
BED34_07885	PF02445	Quinolinate synthetase A protein
BED34_07890	PF04973	BED34_07890
BED34_07895	PF01545	Cation efflux family
BED34_07900	PF00793	DAHP synthetase I family
BED34_07905	PF00300	Histidine phosphatase superfamily (branch 1)
BED34_07910	PF01223	DNA/RNA non-specific endonuclease
BED34_07920	PF00082	Subtilase family
BED34_07925	PF07769	BED34_07925
BED34_07930	PF01263	Aldose 1-epimerase
BED34_07935	PF00288	GHMP kinases N terminal domain
BED34_07935	PF08544	GHMP kinases C terminal
BED34_07935	PF10509	Galactokinase galactose-binding signature
BED34_07940	PF01087	Galactose-1-phosphate uridyl transferase, N-terminal domain
BED34_07940	PF02744	Galactose-1-phosphate uridyl transferase, C-terminal domain
BED34_07945	PF16363	BED34_07945
BED34_07950	PF02517	CAAX protease self-immunity
BED34_07955	PF00005	ABC transporter
BED34_07960	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BED34_07960	PF03459	TOBE domain
BED34_07965	PF10766	Protein of unknown function (DUF2592)
BED34_07970	PF13531	Bacterial extracellular solute-binding protein
BED34_07975	PF00528	Binding-protein-dependent transport system inner membrane component
BED34_07980	PF00005	ABC transporter
BED34_07980	PF03459	TOBE domain
BED34_07985	PF08282	haloacid dehalogenase-like hydrolase
BED34_07990	PF10282	Lactonase, 7-bladed beta-propeller
BED34_07995	PF00202	Aminotransferase class-III
BED34_08000	PF04055	Radical SAM superfamily
BED34_08000	PF06968	Biotin and Thiamin Synthesis associated domain
BED34_08005	PF00155	Aminotransferase class I and II
BED34_08010	PF08241	Methyltransferase domain
BED34_08015	PF13500	AAA domain
BED34_08020	PF00005	ABC transporter
BED34_08025	PF00271	Helicase conserved C-terminal domain
BED34_08025	PF02151	UvrB/uvrC motif
BED34_08025	PF04851	Type III restriction enzyme, res subunit
BED34_08025	PF12344	Ultra-violet resistance protein B
BED34_08030	PF09905	Uncharacterized conserved protein (DUF2132)
BED34_08035	PF01933	Uncharacterised protein family UPF0052
BED34_08040	PF04055	Radical SAM superfamily
BED34_08040	PF06463	Molybdenum Cofactor Synthesis C
BED34_08040	PF13353	4Fe-4S single cluster domain
BED34_08045	PF01967	MoaC family
BED34_08050	PF02597	ThiS family
BED34_08055	PF02391	MoaE protein
BED34_08060	PF01027	Inhibitor of apoptosis-promoting Bax1
BED34_08065	PF12698	ABC-2 family transporter protein
BED34_08070	PF12698	ABC-2 family transporter protein
BED34_08075	PF00005	ABC transporter
BED34_08080	PF16576	BED34_08080
BED34_08085	PF00440	Bacterial regulatory proteins, tetR family
BED34_08085	PF09209	Domain of unknown function (DUF1956)
BED34_08090	PF00270	DEAD/DEAH box helicase
BED34_08090	PF00271	Helicase conserved C-terminal domain
BED34_08095	PF01207	Dihydrouridine synthase (Dus)
BED34_08105	PF00571	CBS domain
BED34_08105	PF01769	Divalent cation transporter
BED34_08110	PF00768	D-alanyl-D-alanine carboxypeptidase
BED34_08115	PF01565	FAD binding domain
BED34_08115	PF09330	D-lactate dehydrogenase, membrane binding
BED34_08120	PF01928	CYTH domain
BED34_08125	PF01844	HNH endonuclease
BED34_08130	PF05076	Suppressor of fused protein (SUFU)
BED34_08135	PF04226	BED34_08135
BED34_08140	PF00005	ABC transporter
BED34_08145	PF12974	ABC transporter, phosphonate, periplasmic substrate-binding protein
BED34_08150	PF00528	Binding-protein-dependent transport system inner membrane component
BED34_08155	PF00528	Binding-protein-dependent transport system inner membrane component
BED34_08160	PF07308	BED34_08160
BED34_08165	PF13433	Periplasmic binding protein domain
BED34_08170	PF02653	BED34_08170
BED34_08170	PF13646	HEAT repeats
BED34_08175	PF02653	BED34_08175
BED34_08180	PF00005	ABC transporter
BED34_08180	PF12399	Branched-chain amino acid ATP-binding cassette transporter
BED34_08185	PF00005	ABC transporter
BED34_08190	PF00581	Rhodanese-like domain
BED34_08200	PF00487	BED34_08200
BED34_08205	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
BED34_08215	PF00005	ABC transporter
BED34_08220	PF00528	Binding-protein-dependent transport system inner membrane component
BED34_08225	PF12974	ABC transporter, phosphonate, periplasmic substrate-binding protein
BED34_08230	PF13561	Enoyl-(Acyl carrier protein) reductase
BED34_08235	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BED34_08235	PF03466	LysR substrate binding domain
BED34_08245	PF00892	EamA-like transporter family
BED34_08250	PF05426	Alginate lyase
BED34_08255	PF00267	Gram-negative porin
BED34_08260	PF06733	DEAD_2
BED34_08260	PF13307	Helicase C-terminal domain
BED34_08265	PF00230	Major intrinsic protein
BED34_08270	PF02885	Glycosyl transferase family, helical bundle domain
BED34_08280	PF07338	Protein of unknown function (DUF1471)
BED34_08285	PF01613	Flavin reductase like domain
BED34_08290	PF05971	Protein of unknown function (DUF890)
BED34_08295	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BED34_08295	PF08447	PAS fold
BED34_08300	PF00005	ABC transporter
BED34_08305	PF00528	Binding-protein-dependent transport system inner membrane component
BED34_08310	PF00497	Bacterial extracellular solute-binding proteins, family 3
BED34_08315	PF01258	Prokaryotic dksA/traR C4-type zinc finger
BED34_08320	PF00210	Ferritin-like domain
BED34_08325	PF13649	Methyltransferase domain
BED34_08330	PF10099	BED34_08330
BED34_08335	PF04542	Sigma-70 region 2
BED34_08335	PF08281	Sigma-70, region 4
BED34_08340	PF02469	Fasciclin domain
BED34_08345	PF00583	Acetyltransferase (GNAT) family
BED34_08350	PF00892	EamA-like transporter family
BED34_08360	PF13505	Outer membrane protein beta-barrel domain
BED34_08365	PF12697	Alpha/beta hydrolase family
BED34_08370	PF01545	Cation efflux family
BED34_08380	PF00005	ABC transporter
BED34_08380	PF12848	ABC transporter
BED34_08385	PF01548	BED34_08385
BED34_08385	PF02371	BED34_08385
BED34_08390	PF00899	ThiF family
BED34_08395	PF00994	Probable molybdopterin binding domain
BED34_08395	PF03453	MoeA N-terminal region (domain I and II)
BED34_08395	PF03454	MoeA C-terminal region (domain IV)
BED34_08400	PF06041	Bacterial protein of unknown function (DUF924)
BED34_08405	PF04055	Radical SAM superfamily
BED34_08410	PF00005	ABC transporter
BED34_08415	PF13437	HlyD family secretion protein
BED34_08430	PF00756	Putative esterase
BED34_08435	PF00107	Zinc-binding dehydrogenase
BED34_08435	PF08240	Alcohol dehydrogenase GroES-like domain
BED34_08440	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BED34_08440	PF03466	LysR substrate binding domain
BED34_08445	PF06779	BED34_08445
BED34_08450	PF01227	GTP cyclohydrolase I
BED34_08455	PF04235	BED34_08455
BED34_08460	PF00356	Bacterial regulatory proteins, lacI family
BED34_08460	PF13377	Periplasmic binding protein-like domain
BED34_08465	PF13407	Periplasmic binding protein domain
BED34_08470	PF00005	ABC transporter
BED34_08475	PF02653	BED34_08475
BED34_08480	PF00158	Sigma-54 interaction domain
BED34_08480	PF01590	GAF domain
BED34_08490	PF00037	4Fe-4S binding domain
BED34_08490	PF12800	4Fe-4S binding domain
BED34_08495	PF01750	Hydrogenase maturation protease
BED34_08500	PF07450	BED34_08500
BED34_08505	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
BED34_08510	PF12838	4Fe-4S dicluster domain
BED34_08515	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
BED34_08515	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
BED34_08515	PF00374	Nickel-dependent hydrogenase
BED34_08520	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
BED34_08520	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
BED34_08525	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
BED34_08530	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
BED34_08530	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
BED34_08535	PF00146	NADH dehydrogenase
BED34_08540	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
BED34_08545	PF00037	4Fe-4S binding domain
BED34_08545	PF12798	4Fe-4S binding domain
BED34_08550	PF01155	Hydrogenase expression/synthesis hypA family
BED34_08555	PF01455	HupF/HypC family
BED34_08560	PF02698	DUF218 domain
BED34_08565	PF00390	Malic enzyme, N-terminal domain
BED34_08565	PF03949	Malic enzyme, NAD binding domain
BED34_08575	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
BED34_08575	PF08211	Cytidine and deoxycytidylate deaminase zinc-binding region
BED34_08580	PF04172	BED34_08580
BED34_08585	PF03788	BED34_08585
BED34_08590	PF07690	Major Facilitator Superfamily
BED34_08595	PF08309	BED34_08595
BED34_08600	PF13407	Periplasmic binding protein domain
BED34_08610	PF01588	Putative tRNA binding domain
BED34_08610	PF09334	tRNA synthetases class I (M)
BED34_08615	PF10609	ParA/MinD ATPase like
BED34_08620	PF00485	Phosphoribulokinase / Uridine kinase family
BED34_08625	PF00692	dUTPase
BED34_08630	PF05170	BED34_08630
BED34_08630	PF13502	BED34_08630
BED34_08635	PF03606	BED34_08635
BED34_08640	PF00571	CBS domain
BED34_08640	PF03471	Transporter associated domain
BED34_08640	PF03741	BED34_08640
BED34_08645	PF05598	BED34_08645
BED34_08645	PF13751	BED34_08645
BED34_08650	PF00483	Nucleotidyl transferase
BED34_08655	PF00535	Glycosyl transferase family 2
BED34_08660	PF00535	Glycosyl transferase family 2
BED34_08665	PF01061	BED34_08665
BED34_08670	PF00005	ABC transporter
BED34_08675	PF00908	dTDP-4-dehydrorhamnose 3,5-epimerase
BED34_08680	PF04321	RmlD substrate binding domain
BED34_08685	PF13692	Glycosyl transferases group 1
BED34_08700	PF00872	BED34_08700
BED34_08725	PF00483	Nucleotidyl transferase
BED34_08730	PF00483	Nucleotidyl transferase
BED34_08735	PF00393	6-phosphogluconate dehydrogenase, C-terminal domain
BED34_08735	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
BED34_08740	PF01502	Phosphoribosyl-AMP cyclohydrolase
BED34_08740	PF01503	Phosphoribosyl-ATP pyrophosphohydrolase
BED34_08745	PF00977	Histidine biosynthesis protein
BED34_08750	PF00977	Histidine biosynthesis protein
BED34_08755	PF00117	Glutamine amidotransferase class-I
BED34_08760	PF00475	Imidazoleglycerol-phosphate dehydratase
BED34_08760	PF08645	Polynucleotide kinase 3 phosphatase
BED34_08765	PF00155	Aminotransferase class I and II
BED34_08770	PF00815	Histidinol dehydrogenase
BED34_08775	PF01634	ATP phosphoribosyltransferase
BED34_08775	PF08029	HisG, C-terminal domain
BED34_08780	PF01370	NAD dependent epimerase/dehydratase family
BED34_08785	PF02653	BED34_08785
BED34_08790	PF00005	ABC transporter
BED34_08795	PF00465	Iron-containing alcohol dehydrogenase
BED34_08805	PF13520	Amino acid permease
BED34_08810	PF00929	Exonuclease
BED34_08810	PF08411	Exonuclease C-terminal
BED34_08815	PF07993	Male sterility protein
BED34_08820	PF13515	BED34_08820
BED34_08825	PF04363	BED34_08825
BED34_08830	PF02653	BED34_08830
BED34_08835	PF02653	BED34_08835
BED34_08840	PF00005	ABC transporter
BED34_08845	PF13407	Periplasmic binding protein domain
BED34_08850	PF00288	GHMP kinases N terminal domain
BED34_08855	PF00155	Aminotransferase class I and II
BED34_08860	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
BED34_08865	PF00871	Acetokinase family
BED34_08870	PF10662	Ethanolamine utilisation - propanediol utilisation
BED34_08875	PF00936	BMC domain
BED34_08880	PF00936	BMC domain
BED34_08885	PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit
BED34_08885	PF10531	SLBB domain
BED34_08885	PF13375	RnfC Barrel sandwich hybrid domain
BED34_08885	PF13534	4Fe-4S dicluster domain
BED34_08890	PF00465	Iron-containing alcohol dehydrogenase
BED34_08895	PF00171	Aldehyde dehydrogenase family
BED34_08900	PF01923	Cobalamin adenosyltransferase
BED34_08900	PF03928	Domain of unknown function (DUF336)
BED34_08905	PF03319	Ethanolamine utilisation protein EutN/carboxysome
BED34_08910	PF15953	BED34_08910
BED34_08915	PF06130	BED34_08915
BED34_08920	PF00936	BMC domain
BED34_08925	PF00936	BMC domain
BED34_08930	PF02288	Dehydratase medium subunit
BED34_08935	PF08841	Diol dehydratase reactivase ATPase-like domain
BED34_08940	PF02287	Dehydratase small subunit
BED34_08945	PF02288	Dehydratase medium subunit
BED34_08950	PF02286	Dehydratase large subunit
BED34_08955	PF00936	BMC domain
BED34_08960	PF00936	BMC domain
BED34_08965	PF00230	Major intrinsic protein
BED34_08970	PF10114	BED34_08970
BED34_08970	PF12833	Helix-turn-helix domain
BED34_08975	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
BED34_08975	PF07685	CobB/CobQ-like glutamine amidotransferase domain
BED34_08985	PF02570	Precorrin-8X methylmutase
BED34_08990	PF01888	CbiD
BED34_08995	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
BED34_09000	PF13847	Methyltransferase domain
BED34_09005	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
BED34_09010	PF01890	Cobalamin synthesis G C-terminus
BED34_09010	PF11760	Cobalamin synthesis G N-terminal
BED34_09010	PF11761	BED34_09010
BED34_09015	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
BED34_09020	PF02571	BED34_09020
BED34_09025	PF06180	Cobalt chelatase (CbiK)
BED34_09030	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
BED34_09035	PF01891	Cobalt uptake substrate-specific transmembrane region
BED34_09040	PF02553	BED34_09040
BED34_09045	PF02361	Cobalt transport protein
BED34_09050	PF00005	ABC transporter
BED34_09055	PF07685	CobB/CobQ-like glutamine amidotransferase domain
BED34_09055	PF13500	AAA domain
BED34_09065	PF02654	BED34_09065
BED34_09070	PF00300	Histidine phosphatase superfamily (branch 1)
BED34_09075	PF02277	Phosphoribosyltransferase
BED34_09090	PF00196	Bacterial regulatory proteins, luxR family
BED34_09095	PF08786	Domain of unknown function (DUF1795)
BED34_09100	PF00691	OmpA family
BED34_09115	PF06744	BED34_09115
BED34_09115	PF06761	BED34_09115
BED34_09115	PF14331	BED34_09115
BED34_09120	PF05954	Phage late control gene D protein (GPD)
BED34_09125	PF05488	PAAR motif
BED34_09135	PF07024	ImpE protein
BED34_09140	PF04965	Gene 25-like lysozyme
BED34_09145	PF00764	Arginosuccinate synthase
BED34_09150	PF01554	MatE
BED34_09165	PF08282	haloacid dehalogenase-like hydrolase
BED34_09170	PF00455	BED34_09170
BED34_09170	PF08220	DeoR-like helix-turn-helix domain
BED34_09175	PF00144	Beta-lactamase
BED34_09180	PF00072	Response regulator receiver domain
BED34_09180	PF01584	CheW-like domain
BED34_09185	PF00440	Bacterial regulatory proteins, tetR family
BED34_09190	PF00155	Aminotransferase class I and II
BED34_09190	PF00392	Bacterial regulatory proteins, gntR family
BED34_09195	PF00583	Acetyltransferase (GNAT) family
BED34_09200	PF02558	Ketopantoate reductase PanE/ApbA
BED34_09200	PF08546	Ketopantoate reductase PanE/ApbA C terminal
BED34_09210	PF00005	ABC transporter
BED34_09210	PF08402	TOBE domain
BED34_09215	PF00528	Binding-protein-dependent transport system inner membrane component
BED34_09220	PF13343	Bacterial extracellular solute-binding protein
BED34_09225	PF07690	Major Facilitator Superfamily
BED34_09230	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BED34_09230	PF05231	BED34_09230
BED34_09230	PF07730	Histidine kinase
BED34_09235	PF00072	Response regulator receiver domain
BED34_09235	PF00196	Bacterial regulatory proteins, luxR family
BED34_09240	PF00072	Response regulator receiver domain
BED34_09240	PF12431	BED34_09240
BED34_09245	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BED34_09260	PF08218	Citrate lyase ligase C-terminal domain
BED34_09265	PF06857	BED34_09265
BED34_09270	PF03328	HpcH/HpaI aldolase/citrate lyase family
BED34_09275	PF04223	Citrate lyase, alpha subunit (CitF)
BED34_09280	PF03802	BED34_09280
BED34_09285	PF01874	ATP:dephospho-CoA triphosphoribosyl transferase
BED34_09290	PF00939	Sodium:sulfate symporter transmembrane region
BED34_09300	PF04290	BED34_09300
BED34_09305	PF03480	Bacterial extracellular solute-binding protein, family 7
BED34_09315	PF01648	4'-phosphopantetheinyl transferase superfamily
BED34_09320	PF05118	Aspartyl/Asparaginyl beta-hydroxylase
BED34_09325	PF00083	Sugar (and other) transporter
BED34_09330	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
BED34_09335	PF09831	BED34_09335
BED34_09340	PF00849	RNA pseudouridylate synthase
BED34_09355	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
BED34_09355	PF02753	Pili assembly chaperone PapD, C-terminal domain
BED34_09360	PF00419	Fimbrial protein
BED34_09365	PF00577	Outer membrane usher protein
BED34_09365	PF13953	PapC C-terminal domain
BED34_09365	PF13954	PapC N-terminal domain
BED34_09370	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
BED34_09370	PF02753	Pili assembly chaperone PapD, C-terminal domain
BED34_09375	PF00419	Fimbrial protein
BED34_09385	PF00072	Response regulator receiver domain
BED34_09385	PF00196	Bacterial regulatory proteins, luxR family
BED34_09395	PF06167	Glucose-regulated metallo-peptidase M90
BED34_09405	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
BED34_09405	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
BED34_09410	PF06551	BED34_09410
BED34_09415	PF06551	BED34_09415
BED34_09430	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
BED34_09435	PF01548	BED34_09435
BED34_09435	PF02371	BED34_09435
BED34_09440	PF00483	Nucleotidyl transferase
BED34_09450	PF14001	BED34_09450
BED34_09460	PF01037	AsnC family
BED34_09460	PF13412	Winged helix-turn-helix DNA-binding
BED34_09465	PF10777	BED34_09465
BED34_09470	PF00107	Zinc-binding dehydrogenase
BED34_09470	PF08240	Alcohol dehydrogenase GroES-like domain
BED34_09475	PF00872	BED34_09475
BED34_09480	PF00703	Glycosyl hydrolases family 2
BED34_09480	PF02836	Glycosyl hydrolases family 2, TIM barrel domain
BED34_09480	PF02837	Glycosyl hydrolases family 2, sugar binding domain
BED34_09480	PF02929	Beta galactosidase small chain
BED34_09480	PF16353	BED34_09480
BED34_09485	PF00356	Bacterial regulatory proteins, lacI family
BED34_09485	PF13377	Periplasmic binding protein-like domain
BED34_09490	PF00313	'Cold-shock' DNA-binding domain
BED34_09495	PF10781	BED34_09495
BED34_09500	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BED34_09500	PF00672	HAMP domain
BED34_09500	PF02203	Tar ligand binding domain homologue
BED34_09515	PF02308	BED34_09515
BED34_09520	PF00122	E1-E2 ATPase
BED34_09520	PF00689	Cation transporting ATPase, C-terminus
BED34_09520	PF00690	Cation transporter/ATPase, N-terminus
BED34_09520	PF00702	haloacid dehalogenase-like hydrolase
BED34_09525	PF00107	Zinc-binding dehydrogenase
BED34_09525	PF16884	BED34_09525
BED34_09530	PF00582	Universal stress protein family
BED34_09535	PF05247	Flagellar transcriptional activator (FlhD)
BED34_09540	PF05280	Flagellar transcriptional activator (FlhC)
BED34_09545	PF01618	BED34_09545
BED34_09550	PF00691	OmpA family
BED34_09550	PF13677	BED34_09550
BED34_09555	PF01584	CheW-like domain
BED34_09555	PF01627	Hpt domain
BED34_09555	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BED34_09555	PF02895	Signal transducing histidine kinase, homodimeric domain
BED34_09555	PF09078	CheY binding
BED34_09560	PF01584	CheW-like domain
BED34_09565	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BED34_09565	PF00672	HAMP domain
BED34_09565	PF02203	Tar ligand binding domain homologue
BED34_09570	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BED34_09570	PF00672	HAMP domain
BED34_09570	PF02203	Tar ligand binding domain homologue
BED34_09575	PF01739	CheR methyltransferase, SAM binding domain
BED34_09575	PF03705	CheR methyltransferase, all-alpha domain
BED34_09580	PF00072	Response regulator receiver domain
BED34_09580	PF01339	CheB methylesterase
BED34_09585	PF00072	Response regulator receiver domain
BED34_09590	PF04344	Chemotaxis phosphatase, CheZ
BED34_09595	PF00082	Subtilase family
BED34_09600	PF01312	FlhB HrpN YscU SpaS Family
BED34_09605	PF00771	FHIPEP family
BED34_09610	PF06366	BED34_09610
BED34_09620	PF05130	FlgN protein
BED34_09625	PF04316	Anti-sigma-28 factor, FlgM
BED34_09630	PF13144	SAF-like
BED34_09635	PF00460	Flagella basal body rod protein
BED34_09640	PF00460	Flagella basal body rod protein
BED34_09640	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
BED34_09645	PF03963	BED34_09645
BED34_09645	PF13860	FlgD Ig-like domain
BED34_09645	PF13861	FlgD Tudor-like domain
BED34_09650	PF00460	Flagella basal body rod protein
BED34_09650	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
BED34_09650	PF07559	Flagellar basal body protein FlaE
BED34_09655	PF00460	Flagella basal body rod protein
BED34_09655	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
BED34_09660	PF00460	Flagella basal body rod protein
BED34_09660	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
BED34_09665	PF02107	BED34_09665
BED34_09670	PF02119	BED34_09670
BED34_09675	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
BED34_09675	PF10135	BED34_09675
BED34_09680	PF00460	Flagella basal body rod protein
BED34_09680	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
BED34_09685	PF00669	Bacterial flagellin N-terminal helical region
BED34_09690	PF01311	BED34_09690
BED34_09695	PF01313	BED34_09695
BED34_09700	PF00813	BED34_09700
BED34_09705	PF04347	BED34_09705
BED34_09710	PF01052	Surface presentation of antigens (SPOA)
BED34_09710	PF16973	BED34_09710
BED34_09715	PF01052	Surface presentation of antigens (SPOA)
BED34_09715	PF02154	Flagellar motor switch protein FliM
BED34_09720	PF03748	BED34_09720
BED34_09725	PF02120	Flagellar hook-length control protein FliK
BED34_09730	PF02050	Flagellar FliJ protein
BED34_09735	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
BED34_09740	PF02108	BED34_09740
BED34_09745	PF01706	FliG C-terminal domain
BED34_09745	PF14841	FliG middle domain
BED34_09745	PF14842	FliG N-terminal domain
BED34_09750	PF01514	Secretory protein of YscJ/FliF family
BED34_09750	PF08345	BED34_09750
BED34_09755	PF02049	BED34_09755
BED34_09780	PF00730	HhH-GPD superfamily base excision DNA repair protein
BED34_09785	PF13487	HD domain
BED34_09790	PF12833	Helix-turn-helix domain
BED34_09795	PF05400	Flagellar protein FliT
BED34_09800	PF02561	Flagellar protein FliS
BED34_09805	PF02465	BED34_09805
BED34_09805	PF07195	BED34_09805
BED34_09805	PF07196	Flagellin hook IN motif
BED34_09810	PF00669	Bacterial flagellin N-terminal helical region
BED34_09810	PF00700	Bacterial flagellin C-terminal helical region
BED34_09815	PF00669	Bacterial flagellin N-terminal helical region
BED34_09815	PF00700	Bacterial flagellin C-terminal helical region
BED34_09825	PF04539	Sigma-70 region 3
BED34_09825	PF04542	Sigma-70 region 2
BED34_09825	PF04545	Sigma-70, region 4
BED34_09830	PF02899	Phage integrase, N-terminal SAM-like domain
BED34_09835	PF00291	Pyridoxal-phosphate dependent enzyme
BED34_09840	PF00497	Bacterial extracellular solute-binding proteins, family 3
BED34_09845	PF00528	Binding-protein-dependent transport system inner membrane component
BED34_09850	PF00005	ABC transporter
BED34_09865	PF00171	Aldehyde dehydrogenase family
BED34_09865	PF01619	Proline dehydrogenase
BED34_09865	PF14850	DNA-binding domain of Proline dehydrogenase
BED34_09870	PF00474	Sodium:solute symporter family
BED34_09890	PF03239	BED34_09890
BED34_09895	PF09375	Imelysin
BED34_09895	PF13473	Cupredoxin-like domain
BED34_09900	PF04261	Dyp-type peroxidase family
BED34_09905	PF03358	NADPH-dependent FMN reductase
BED34_09910	PF01381	Helix-turn-helix
BED34_09910	PF13239	BED34_09910
BED34_09915	PF01344	Kelch motif
BED34_09930	PF01613	Flavin reductase like domain
BED34_09935	PF00881	Nitroreductase family
BED34_09940	PF00561	alpha/beta hydrolase fold
BED34_09945	PF01042	Endoribonuclease L-PSP
BED34_09950	PF00857	Isochorismatase family
BED34_09960	PF00440	Bacterial regulatory proteins, tetR family
BED34_09960	PF08362	YcdC-like protein, C-terminal region
BED34_09965	PF00324	Amino acid permease
BED34_09975	PF00589	Phage integrase family
BED34_09980	PF01527	Transposase
BED34_09985	PF13683	BED34_09985
BED34_09995	PF08459	UvrC Helix-hairpin-helix N-terminal
BED34_09995	PF14520	Helix-hairpin-helix domain
BED34_10000	PF01066	CDP-alcohol phosphatidyltransferase
BED34_10020	PF04606	BED34_10020
BED34_10030	PF05954	Phage late control gene D protein (GPD)
BED34_10050	PF05069	BED34_10050
BED34_10055	PF06891	BED34_10055
BED34_10065	PF13539	D-alanyl-D-alanine carboxypeptidase
BED34_10085	PF05598	BED34_10085
BED34_10085	PF13751	BED34_10085
BED34_10090	PF07690	Major Facilitator Superfamily
BED34_10095	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BED34_10095	PF03466	LysR substrate binding domain
BED34_10100	PF01381	Helix-turn-helix
BED34_10105	PF00132	Bacterial transferase hexapeptide (six repeats)
BED34_10115	PF06530	BED34_10115
BED34_10120	PF10753	BED34_10120
BED34_10125	PF16080	BED34_10125
BED34_10130	PF00959	Phage lysozyme
BED34_10135	PF00561	alpha/beta hydrolase fold
BED34_10140	PF04391	BED34_10140
BED34_10145	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BED34_10145	PF03466	LysR substrate binding domain
BED34_10150	PF00144	Beta-lactamase
BED34_10155	PF01926	50S ribosome-binding GTPase
BED34_10155	PF06071	Protein of unknown function (DUF933)
BED34_10165	PF01195	Peptidyl-tRNA hydrolase
BED34_10170	PF10762	BED34_10170
BED34_10180	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
BED34_10180	PF14572	Phosphoribosyl synthetase-associated domain
BED34_10185	PF00288	GHMP kinases N terminal domain
BED34_10185	PF08544	GHMP kinases C terminal
BED34_10190	PF03550	Outer membrane lipoprotein LolB
BED34_10195	PF00745	Glutamyl-tRNAGlu reductase, dimerisation domain
BED34_10195	PF01488	Shikimate / quinate 5-dehydrogenase
BED34_10195	PF05201	Glutamyl-tRNAGlu reductase, N-terminal domain
BED34_10200	PF00472	RF-1 domain
BED34_10200	PF03462	PCRF domain
BED34_10205	PF13847	Methyltransferase domain
BED34_10210	PF04247	BED34_10210
BED34_10215	PF13369	BED34_10215
BED34_10215	PF13371	Tetratricopeptide repeat
BED34_10220	PF00793	DAHP synthetase I family
BED34_10225	PF00916	BED34_10225
BED34_10225	PF01740	STAS domain
BED34_10230	PF00990	GGDEF domain
BED34_10255	PF02811	PHP domain
BED34_10260	PF02613	Nitrate reductase delta subunit
BED34_10265	PF07273	Protein of unknown function (DUF1439)
BED34_10270	PF07690	Major Facilitator Superfamily
BED34_10280	PF13988	BED34_10280
BED34_10285	PF13302	Acetyltransferase (GNAT) domain
BED34_10290	PF04337	Protein of unknown function, DUF480
BED34_10295	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
BED34_10300	PF03023	BED34_10300
BED34_10305	PF01699	Sodium/calcium exchanger protein
BED34_10310	PF04954	Siderophore-interacting protein
BED34_10310	PF08021	Siderophore-interacting FAD-binding domain
BED34_10315	PF07690	Major Facilitator Superfamily
BED34_10320	PF01548	BED34_10320
BED34_10320	PF02371	BED34_10320
BED34_10330	PF00672	HAMP domain
BED34_10330	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BED34_10330	PF07730	Histidine kinase
BED34_10330	PF13675	Type IV pili methyl-accepting chemotaxis transducer N-term
BED34_10335	PF02322	BED34_10335
BED34_10340	PF01654	BED34_10340
BED34_10345	PF00155	Aminotransferase class I and II
BED34_10345	PF00392	Bacterial regulatory proteins, gntR family
BED34_10350	PF00202	Aminotransferase class-III
BED34_10355	PF04958	Arginine N-succinyltransferase beta subunit
BED34_10360	PF00171	Aldehyde dehydrogenase family
BED34_10365	PF04996	Succinylarginine dihydrolase
BED34_10370	PF04952	Succinylglutamate desuccinylase / Aspartoacylase family
BED34_10375	PF01548	BED34_10375
BED34_10375	PF02371	BED34_10375
BED34_10380	PF00267	Gram-negative porin
BED34_10385	PF00665	Integrase core domain
BED34_10390	PF13518	Helix-turn-helix domain
BED34_10395	PF05013	N-formylglutamate amidohydrolase
BED34_10400	PF01979	Amidohydrolase family
BED34_10405	PF00392	Bacterial regulatory proteins, gntR family
BED34_10405	PF07702	UTRA domain
BED34_10410	PF01979	Amidohydrolase family
BED34_10430	PF03797	Autotransporter beta-domain
BED34_10435	PF02502	Ribose/Galactose Isomerase
BED34_10435	PF12408	Ribose-5-phosphate isomerase
BED34_10440	PF01476	LysM domain
BED34_10440	PF01551	Peptidase family M23
BED34_10445	PF01116	Fructose-bisphosphate aldolase class-II
BED34_10450	PF01380	SIS domain
BED34_10455	PF03610	PTS system fructose IIA component
BED34_10460	PF03613	BED34_10460
BED34_10470	PF03830	PTS system sorbose subfamily IIB component
BED34_10475	PF08013	Tagatose 6 phosphate kinase
BED34_10480	PF00455	BED34_10480
BED34_10480	PF08220	DeoR-like helix-turn-helix domain
BED34_10490	PF01548	BED34_10490
BED34_10490	PF02371	BED34_10490
BED34_10495	PF06551	BED34_10495
BED34_10500	PF00849	RNA pseudouridylate synthase
BED34_10500	PF01479	S4 domain
BED34_10505	PF03616	BED34_10505
BED34_10515	PF01548	BED34_10515
BED34_10520	PF02371	BED34_10520
BED34_10525	PF08003	Protein of unknown function (DUF1698)
BED34_10530	PF13649	Methyltransferase domain
BED34_10535	PF01124	MAPEG family
BED34_10540	PF01904	Protein of unknown function DUF72
BED34_10545	PF00857	Isochorismatase family
BED34_10550	PF00152	tRNA synthetases class II (D, K and N)
BED34_10550	PF01336	OB-fold nucleic acid binding domain
BED34_10550	PF02938	GAD domain
BED34_10555	PF00293	NUDIX domain
BED34_10560	PF01709	Transcriptional regulator
BED34_10565	PF02075	Crossover junction endodeoxyribonuclease RuvC
BED34_10570	PF01330	RuvA N terminal domain
BED34_10570	PF07499	RuvA, C-terminal domain
BED34_10570	PF14520	Helix-hairpin-helix domain
BED34_10575	PF05491	Holliday junction DNA helicase ruvB C-terminus
BED34_10575	PF05496	Holliday junction DNA helicase ruvB N-terminus
BED34_10580	PF00854	POT family
BED34_10585	PF00950	BED34_10585
BED34_10590	PF00005	ABC transporter
BED34_10595	PF01297	Periplasmic solute binding protein family
BED34_10600	PF01551	Peptidase family M23
BED34_10600	PF04225	Opacity-associated protein A LysM-like domain
BED34_10600	PF08525	BED34_10600
BED34_10605	PF03279	BED34_10605
BED34_10620	PF00224	Pyruvate kinase, barrel domain
BED34_10620	PF02887	Pyruvate kinase, alpha/beta domain
BED34_10625	PF01380	SIS domain
BED34_10625	PF01418	Helix-turn-helix domain, rpiR family
BED34_10630	PF00479	Glucose-6-phosphate dehydrogenase, NAD binding domain
BED34_10630	PF02781	Glucose-6-phosphate dehydrogenase, C-terminal domain
BED34_10635	PF01081	KDPG and KHG aldolase
BED34_10640	PF00893	Small Multidrug Resistance protein
BED34_10645	PF00893	Small Multidrug Resistance protein
BED34_10650	PF01042	Endoribonuclease L-PSP
BED34_10655	PF06733	DEAD_2
BED34_10655	PF13307	Helicase C-terminal domain
BED34_10660	PF00814	Glycoprotease family
BED34_10670	PF00501	AMP-binding enzyme
BED34_10670	PF13193	AMP-binding enzyme C-terminal domain
BED34_10675	PF00570	HRDC domain
BED34_10675	PF01612	3'-5' exonuclease
BED34_10680	PF03776	Septum formation topological specificity factor MinE
BED34_10685	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
BED34_10690	PF03775	Septum formation inhibitor MinC, C-terminal domain
BED34_10690	PF05209	Septum formation inhibitor MinC, N-terminal domain
BED34_10700	PF05166	YcgL domain
BED34_10705	PF13406	Transglycosylase SLT domain
BED34_10710	PF01557	Fumarylacetoacetate (FAA) hydrolase family
BED34_10715	PF03692	BED34_10715
BED34_10730	PF00892	EamA-like transporter family
BED34_10740	PF00924	Mechanosensitive ion channel
BED34_10745	PF13417	Glutathione S-transferase, N-terminal domain
BED34_10745	PF14834	Glutathione S-transferase, C-terminal domain
BED34_10750	PF13302	Acetyltransferase (GNAT) domain
BED34_10760	PF04266	ASCH domain
BED34_10765	PF07351	BED34_10765
BED34_10775	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
BED34_10780	PF05229	BED34_10780
BED34_10785	PF05229	BED34_10785
BED34_10790	PF05229	BED34_10790
BED34_10795	PF07690	Major Facilitator Superfamily
BED34_10800	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BED34_10800	PF03466	LysR substrate binding domain
BED34_10805	PF02470	BED34_10805
BED34_10810	PF04403	BED34_10810
BED34_10815	PF13185	GAF domain
BED34_10820	PF04352	ProQ/FINO family
BED34_10820	PF17516	BED34_10820
BED34_10825	PF00595	PDZ domain (Also known as DHR or GLGF)
BED34_10825	PF03572	Peptidase family S41
BED34_10825	PF11818	BED34_10825
BED34_10830	PF01435	Peptidase family M48
BED34_10845	PF14583	Oligogalacturonate lyase
BED34_10850	PF01614	Bacterial transcriptional regulator
BED34_10850	PF09339	IclR helix-turn-helix domain
BED34_10855	PF01471	Putative peptidoglycan binding domain
BED34_10855	PF01510	N-acetylmuramoyl-L-alanine amidase
BED34_10865	PF04307	BED34_10865
BED34_10875	PF06178	Oligogalacturonate-specific porin protein (KdgM)
BED34_10880	PF13416	Bacterial extracellular solute-binding protein
BED34_10885	PF00005	ABC transporter
BED34_10885	PF08402	TOBE domain
BED34_10890	PF00528	Binding-protein-dependent transport system inner membrane component
BED34_10895	PF00528	Binding-protein-dependent transport system inner membrane component
BED34_10900	PF06917	Periplasmic pectate lyase
BED34_10905	PF13561	Enoyl-(Acyl carrier protein) reductase
BED34_10910	PF04962	KduI/IolB family
BED34_10915	PF07883	Cupin domain
BED34_10920	PF00872	BED34_10920
BED34_10925	PF13419	Haloacid dehalogenase-like hydrolase
BED34_10930	PF14002	BED34_10930
BED34_10935	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BED34_10935	PF03466	LysR substrate binding domain
BED34_10940	PF02550	Acetyl-CoA hydrolase/transferase N-terminal domain
BED34_10940	PF13336	Acetyl-CoA hydrolase/transferase C-terminal domain
BED34_10945	PF00378	Enoyl-CoA hydratase/isomerase family
BED34_10950	PF03308	ArgK protein
BED34_10960	PF03881	Fructosamine kinase
BED34_10965	PF00950	BED34_10965
BED34_10970	PF00950	BED34_10970
BED34_10975	PF00005	ABC transporter
BED34_10980	PF01297	Periplasmic solute binding protein family
BED34_10985	PF01464	Transglycosylase SLT domain
BED34_10990	PF01914	BED34_10990
BED34_11015	PF04474	BED34_11015
BED34_11020	PF13619	BED34_11020
BED34_11025	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
BED34_11025	PF02824	TGS domain
BED34_11025	PF03129	Anticodon binding domain
BED34_11025	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
BED34_11030	PF00707	Translation initiation factor IF-3, C-terminal domain
BED34_11035	PF01632	Ribosomal protein L35
BED34_11040	PF00453	Ribosomal protein L20
BED34_11045	PF01409	tRNA synthetases class II core domain (F)
BED34_11045	PF02912	Aminoacyl tRNA synthetase class II, N-terminal domain
BED34_11050	PF01588	Putative tRNA binding domain
BED34_11050	PF03147	Ferredoxin-fold anticodon binding domain
BED34_11050	PF03483	B3/4 domain
BED34_11050	PF03484	tRNA synthetase B5 domain
BED34_11055	PF00216	Bacterial DNA-binding protein
BED34_11060	PF13358	DDE superfamily endonuclease
BED34_11060	PF13384	Homeodomain-like domain
BED34_11065	PF10697	BED34_11065
BED34_11070	PF01032	FecCD transport family
BED34_11075	PF00255	Glutathione peroxidase
BED34_11080	PF00005	ABC transporter
BED34_11085	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
BED34_11090	PF00535	Glycosyl transferase family 2
BED34_11095	PF00551	Formyl transferase
BED34_11095	PF01370	NAD dependent epimerase/dehydratase family
BED34_11095	PF02911	Formyl transferase, C-terminal domain
BED34_11100	PF01522	Polysaccharide deacetylase
BED34_11105	PF02366	BED34_11105
BED34_11110	PF00892	EamA-like transporter family
BED34_11120	PF00877	NlpC/P60 family
BED34_11130	PF02696	BED34_11130
BED34_11145	PF00593	TonB dependent receptor
BED34_11145	PF07715	TonB-dependent Receptor Plug Domain
BED34_11150	PF10636	Hemin uptake protein hemP
BED34_11155	PF00793	DAHP synthetase I family
BED34_11160	PF03618	BED34_11160
BED34_11165	PF00391	PEP-utilising enzyme, mobile domain
BED34_11165	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
BED34_11165	PF02896	PEP-utilising enzyme, TIM barrel domain
BED34_11175	PF01594	BED34_11175
BED34_11180	PF01565	FAD binding domain
BED34_11180	PF02913	FAD linked oxidases, C-terminal domain
BED34_11180	PF13183	4Fe-4S dicluster domain
BED34_11185	PF03061	Thioesterase superfamily
BED34_11190	PF01521	Iron-sulphur cluster biosynthesis
BED34_11195	PF01458	Uncharacterized protein family (UPF0051)
BED34_11200	PF00005	ABC transporter
BED34_11205	PF01458	Uncharacterized protein family (UPF0051)
BED34_11210	PF00266	Aminotransferase class-V
BED34_11215	PF02657	Fe-S metabolism associated domain
BED34_11220	PF03734	L,D-transpeptidase catalytic domain
BED34_11225	PF04728	Lipoprotein leucine-zipper
BED34_11230	PF00224	Pyruvate kinase, barrel domain
BED34_11230	PF02887	Pyruvate kinase, alpha/beta domain
BED34_11250	PF00677	Lumazine binding domain
BED34_11255	PF02353	Mycolic acid cyclopropane synthetase
BED34_11260	PF07690	Major Facilitator Superfamily
BED34_11265	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BED34_11265	PF03466	LysR substrate binding domain
BED34_11270	PF00356	Bacterial regulatory proteins, lacI family
BED34_11270	PF13377	Periplasmic binding protein-like domain
BED34_11275	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
BED34_11275	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
BED34_11280	PF00877	NlpC/P60 family
BED34_11285	PF00462	Glutaredoxin
BED34_11290	PF00929	Exonuclease
BED34_11295	PF05598	BED34_11295
BED34_11295	PF13751	BED34_11295
BED34_11300	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BED34_11310	PF00440	Bacterial regulatory proteins, tetR family
BED34_11310	PF16925	BED34_11310
BED34_11315	PF00884	Sulfatase
BED34_11315	PF08019	BED34_11315
BED34_11320	PF06945	BED34_11320
BED34_11325	PF00248	Aldo/keto reductase family
BED34_11330	PF04632	BED34_11330
BED34_11340	PF07869	BED34_11340
BED34_11345	PF01047	MarR family
BED34_11350	PF05433	BED34_11350
BED34_11355	PF03702	Uncharacterised protein family (UPF0075)
BED34_11360	PF09864	Membrane-bound lysozyme-inhibitor of c-type lysozyme
BED34_11365	PF01243	Pyridoxamine 5'-phosphate oxidase
BED34_11365	PF10590	Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region
BED34_11370	PF00579	tRNA synthetases class I (W and Y)
BED34_11370	PF01479	S4 domain
BED34_11380	PF00043	Glutathione S-transferase, C-terminal domain
BED34_11380	PF02798	Glutathione S-transferase, N-terminal domain
BED34_11385	PF11656	BED34_11385
BED34_11390	PF06930	BED34_11390
BED34_11395	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BED34_11400	PF01548	BED34_11400
BED34_11400	PF02371	BED34_11400
BED34_11405	PF00854	POT family
BED34_11410	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BED34_11410	PF03466	LysR substrate binding domain
BED34_11425	PF00005	ABC transporter
BED34_11430	PF00005	ABC transporter
BED34_11430	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
BED34_11435	PF00528	Binding-protein-dependent transport system inner membrane component
BED34_11435	PF12911	BED34_11435
BED34_11440	PF00528	Binding-protein-dependent transport system inner membrane component
BED34_11445	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
BED34_11460	PF00158	Sigma-54 interaction domain
BED34_11460	PF02954	Bacterial regulatory protein, Fis family
BED34_11465	PF04012	BED34_11465
BED34_11470	PF06667	BED34_11470
BED34_11475	PF04024	BED34_11475
BED34_11480	PF09584	BED34_11480
BED34_11485	PF04317	BED34_11485
BED34_11490	PF05128	BED34_11490
BED34_11495	PF08808	BED34_11495
BED34_11500	PF09722	BED34_11500
BED34_11505	PF00158	Sigma-54 interaction domain
BED34_11505	PF00989	PAS fold
BED34_11510	PF08534	Redoxin
BED34_11515	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
BED34_11515	PF13378	Enolase C-terminal domain-like
BED34_11520	PF00246	Zinc carboxypeptidase
BED34_11525	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
BED34_11530	PF01544	CorA-like Mg2+ transporter protein
BED34_11535	PF01171	PP-loop family
BED34_11540	PF00388	Phosphatidylinositol-specific phospholipase C, X domain
BED34_11550	PF00893	Small Multidrug Resistance protein
BED34_11555	PF02308	BED34_11555
BED34_11560	PF03891	BED34_11560
BED34_11565	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
BED34_11565	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
BED34_11570	PF11739	BED34_11570
BED34_11575	PF13617	BED34_11575
BED34_11580	PF07027	BED34_11580
BED34_11585	PF02525	Flavodoxin-like fold
BED34_11590	PF00270	DEAD/DEAH box helicase
BED34_11590	PF00271	Helicase conserved C-terminal domain
BED34_11590	PF04408	Helicase associated domain (HA2)
BED34_11590	PF07717	Oligonucleotide/oligosaccharide-binding (OB)-fold
BED34_11590	PF11898	BED34_11590
BED34_11595	PF05973	BED34_11595
BED34_11600	PF01381	Helix-turn-helix
BED34_11605	PF00089	Trypsin
BED34_11615	PF02074	Carboxypeptidase Taq (M32) metallopeptidase
BED34_11620	PF00672	HAMP domain
BED34_11620	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BED34_11625	PF00072	Response regulator receiver domain
BED34_11625	PF00486	Transcriptional regulatory protein, C terminal
BED34_11635	PF13520	Amino acid permease
BED34_11640	PF07338	Protein of unknown function (DUF1471)
BED34_11650	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
BED34_11650	PF05222	Alanine dehydrogenase/PNT, N-terminal domain
BED34_11650	PF12769	Domain of unknown function (DUF3814)
BED34_11655	PF02233	NAD(P) transhydrogenase beta subunit
BED34_11660	PF00582	Universal stress protein family
BED34_11665	PF00027	Cyclic nucleotide-binding domain
BED34_11665	PF13545	Crp-like helix-turn-helix domain
BED34_11670	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
BED34_11670	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
BED34_11675	PF05013	N-formylglutamate amidohydrolase
BED34_11680	PF04463	BED34_11680
BED34_11685	PF06445	GyrI-like small molecule binding domain
BED34_11690	PF13561	Enoyl-(Acyl carrier protein) reductase
BED34_11710	PF13208	BED34_11710
BED34_11710	PF15615	BED34_11710
BED34_11715	PF13419	Haloacid dehalogenase-like hydrolase
BED34_11720	PF13710	ACT domain
BED34_11725	PF00205	Thiamine pyrophosphate enzyme, central domain
BED34_11725	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
BED34_11725	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
BED34_11730	PF07313	Protein of unknown function (DUF1460)
BED34_11735	PF01510	N-acetylmuramoyl-L-alanine amidase
BED34_11745	PF07520	BED34_11745
BED34_11765	PF13449	Esterase-like activity of phytase
BED34_11775	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BED34_11780	PF07690	Major Facilitator Superfamily
BED34_11785	PF13396	BED34_11785
BED34_11790	PF13354	Beta-lactamase enzyme family
BED34_11795	PF05472	DNA replication terminus site-binding protein (Ter protein)
BED34_11800	PF00196	Bacterial regulatory proteins, luxR family
BED34_11800	PF08448	PAS fold
BED34_11805	PF00206	Lyase
BED34_11805	PF10415	Fumarase C C-terminus
BED34_11810	PF01238	Phosphomannose isomerase type I
BED34_11815	PF06097	BED34_11815
BED34_11825	PF00356	Bacterial regulatory proteins, lacI family
BED34_11825	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
BED34_11830	PF00367	phosphotransferase system, EIIB
BED34_11830	PF02378	Phosphotransferase system, EIIC
BED34_11835	PF00155	Aminotransferase class I and II
BED34_11840	PF00962	Adenosine/AMP deaminase
BED34_11845	PF13593	SBF-like CPA transporter family (DUF4137)
BED34_11850	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
BED34_11850	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
BED34_11855	PF02311	AraC-like ligand binding domain
BED34_11855	PF12833	Helix-turn-helix domain
BED34_11865	PF00005	ABC transporter
BED34_11870	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
BED34_11875	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
BED34_11875	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
BED34_11880	PF02610	L-arabinose isomerase
BED34_11880	PF11762	L-arabinose isomerase C-terminal domain
BED34_11890	PF13175	AAA ATPase domain
BED34_11890	PF13304	AAA domain
BED34_11900	PF13437	HlyD family secretion protein
BED34_11900	PF13533	Biotin-lipoyl like
BED34_11915	PF10754	BED34_11915
BED34_11920	PF02508	BED34_11920
BED34_11925	PF04060	Putative Fe-S cluster
BED34_11925	PF14697	4Fe-4S dicluster domain
BED34_11930	PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit
BED34_11930	PF10531	SLBB domain
BED34_11930	PF13237	4Fe-4S dicluster domain
BED34_11930	PF13375	RnfC Barrel sandwich hybrid domain
BED34_11940	PF06445	GyrI-like small molecule binding domain
BED34_11940	PF12833	Helix-turn-helix domain
BED34_11945	PF03116	BED34_11945
BED34_11950	PF04205	FMN-binding domain
BED34_11955	PF02508	BED34_11955
BED34_11960	PF00633	Helix-hairpin-helix motif
BED34_11960	PF00730	HhH-GPD superfamily base excision DNA repair protein
BED34_11960	PF10576	Iron-sulfur binding domain of endonuclease III
BED34_12035	PF00293	NUDIX domain
BED34_12035	PF09979	BED34_12035
BED34_12045	PF06381	BED34_12045
BED34_12050	PF03237	Terminase-like family
BED34_12060	PF03245	BED34_12060
BED34_12065	PF00959	Phage lysozyme
BED34_12090	PF05766	BED34_12090
BED34_12100	PF05772	NinB protein
BED34_12110	PF04448	BED34_12110
BED34_12125	PF01695	IstB-like ATP binding protein
BED34_12130	PF04492	BED34_12130
BED34_12140	PF05269	Bacteriophage CII protein
BED34_12145	PF13560	Helix-turn-helix domain
BED34_12150	PF00717	Peptidase S24-like
BED34_12150	PF01381	Helix-turn-helix
BED34_12160	PF08861	BED34_12160
BED34_12165	PF10965	BED34_12165
BED34_12205	PF12684	PDDEXK-like domain of unknown function (DUF3799)
BED34_12210	PF03837	BED34_12210
BED34_12225	PF00575	S1 RNA binding domain
BED34_12225	PF00773	RNB domain
BED34_12225	PF08206	Ribonuclease B OB domain
BED34_12230	PF02554	BED34_12230
BED34_12230	PF13722	BED34_12230
BED34_12235	PF04328	BED34_12235
BED34_12240	PF00923	Transaldolase
BED34_12245	PF00455	BED34_12245
BED34_12245	PF08220	DeoR-like helix-turn-helix domain
BED34_12250	PF09932	BED34_12250
BED34_12255	PF00596	Class II Aldolase and Adducin N-terminal domain
BED34_12260	PF05433	BED34_12260
BED34_12265	PF01253	Translation initiation factor SUI1
BED34_12270	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
BED34_12275	PF07338	Protein of unknown function (DUF1471)
BED34_12280	PF03594	BED34_12280
BED34_12285	PF01381	Helix-turn-helix
BED34_12285	PF07883	Cupin domain
BED34_12295	PF13176	Tetratricopeptide repeat
BED34_12295	PF13432	Tetratricopeptide repeat
BED34_12300	PF06305	BED34_12300
BED34_12305	PF01569	PAP2 superfamily
BED34_12310	PF00925	GTP cyclohydrolase II
BED34_12315	PF00330	Aconitase family (aconitate hydratase)
BED34_12315	PF00694	Aconitase C-terminal domain
BED34_12325	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BED34_12325	PF03466	LysR substrate binding domain
BED34_12330	PF01131	DNA topoisomerase
BED34_12330	PF01396	BED34_12330
BED34_12330	PF01751	Toprim domain
BED34_12330	PF08272	Topoisomerase I zinc-ribbon-like
BED34_12335	PF10692	Protein of unknown function (DUF2498)
BED34_12340	PF01343	Peptidase family S49
BED34_12340	PF08496	BED34_12340
BED34_12345	PF00106	short chain dehydrogenase
BED34_12350	PF02572	ATP:corrinoid adenosyltransferase BtuR/CobO/CobP
BED34_12350	PF12557	Cob(I)alamin adenosyltransferase N terminal
BED34_12360	PF00849	RNA pseudouridylate synthase
BED34_12360	PF01479	S4 domain
BED34_12365	PF01300	Telomere recombination
BED34_12370	PF02811	PHP domain
BED34_12375	PF00425	chorismate binding enzyme
BED34_12375	PF04715	Anthranilate synthase component I, N terminal region
BED34_12380	PF00117	Glutamine amidotransferase class-I
BED34_12385	PF00591	Glycosyl transferase family, a/b domain
BED34_12385	PF02885	Glycosyl transferase family, helical bundle domain
BED34_12390	PF00218	Indole-3-glycerol phosphate synthase
BED34_12390	PF00697	N-(5'phosphoribosyl)anthranilate (PRA) isomerase
BED34_12395	PF00291	Pyridoxal-phosphate dependent enzyme
BED34_12400	PF00290	Tryptophan synthase alpha chain
BED34_12405	PF04972	BON domain
BED34_12410	PF03922	OmpW family
BED34_12415	PF03692	BED34_12415
BED34_12420	PF06790	BED34_12420
BED34_12425	PF00916	BED34_12425
BED34_12425	PF01740	STAS domain
BED34_12430	PF04279	BED34_12430
BED34_12435	PF03061	Thioesterase superfamily
BED34_12440	PF03544	Gram-negative bacterial TonB protein C-terminal
BED34_12440	PF16031	BED34_12440
BED34_12445	PF03795	YCII-related domain
BED34_12455	PF00563	EAL domain
BED34_12460	PF13091	PLD-like domain
BED34_12460	PF13396	BED34_12460
BED34_12465	PF04269	Protein of unknown function, DUF440
BED34_12470	PF00005	ABC transporter
BED34_12470	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
BED34_12475	PF00005	ABC transporter
BED34_12475	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
BED34_12480	PF00528	Binding-protein-dependent transport system inner membrane component
BED34_12480	PF12911	BED34_12480
BED34_12485	PF00528	Binding-protein-dependent transport system inner membrane component
BED34_12490	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
BED34_12495	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
BED34_12500	PF01914	BED34_12500
BED34_12505	PF00171	Aldehyde dehydrogenase family
BED34_12505	PF00465	Iron-containing alcohol dehydrogenase
BED34_12510	PF00265	Thymidine kinase
BED34_12520	PF00816	H-NS histone family
BED34_12525	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
BED34_12525	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
BED34_12525	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
BED34_12530	PF00072	Response regulator receiver domain
BED34_12535	PF01734	Patatin-like phospholipase
BED34_12545	PF02810	SEC-C motif
BED34_12550	PF00551	Formyl transferase
BED34_12550	PF01842	ACT domain
BED34_12565	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BED34_12570	PF03372	Endonuclease/Exonuclease/phosphatase family
BED34_12575	PF00293	NUDIX domain
BED34_12580	PF07383	BED34_12580
BED34_12585	PF01131	DNA topoisomerase
BED34_12585	PF01751	Toprim domain
BED34_12590	PF00586	AIR synthase related protein, N-terminal domain
BED34_12590	PF02769	AIR synthase related protein, C-terminal domain
BED34_12595	PF00881	Nitroreductase family
BED34_12605	PF00710	Asparaginase
BED34_12610	PF00857	Isochorismatase family
BED34_12625	PF01641	SelR domain
BED34_12630	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
BED34_12630	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
BED34_12635	PF01263	Aldose 1-epimerase
BED34_12640	PF06629	BED34_12640
BED34_12645	PF06798	BED34_12645
BED34_12645	PF08298	PrkA AAA domain
BED34_12650	PF04285	BED34_12650
BED34_12655	PF00892	EamA-like transporter family
BED34_12665	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BED34_12665	PF03466	LysR substrate binding domain
BED34_12670	PF02678	Pirin
BED34_12670	PF05726	Pirin C-terminal cupin domain
BED34_12675	PF00563	EAL domain
BED34_12675	PF00990	GGDEF domain
BED34_12675	PF08447	PAS fold
BED34_12675	PF13185	GAF domain
BED34_12675	PF13426	PAS domain
BED34_12685	PF00842	Alanine racemase, C-terminal domain
BED34_12685	PF01168	Alanine racemase, N-terminal domain
BED34_12690	PF01266	FAD dependent oxidoreductase
BED34_12695	PF04293	BED34_12695
BED34_12700	PF00392	Bacterial regulatory proteins, gntR family
BED34_12700	PF07840	FadR C-terminal domain
BED34_12705	PF06450	BED34_12705
BED34_12710	PF02600	Disulfide bond formation protein DsbB
BED34_12730	PF03932	CutC family
BED34_12735	PF06185	YecM protein
BED34_12740	PF00750	tRNA synthetases class I (R)
BED34_12740	PF03485	Arginyl tRNA synthetase N terminal domain
BED34_12740	PF05746	DALR anticodon binding domain
BED34_12745	PF05598	BED34_12745
BED34_12745	PF13751	BED34_12745
BED34_12750	PF02562	PhoH-like protein
BED34_12760	PF13302	Acetyltransferase (GNAT) domain
BED34_12765	PF13994	BED34_12765
BED34_12770	PF00535	Glycosyl transferase family 2
BED34_12785	PF00557	Metallopeptidase family M24
BED34_12785	PF01321	Creatinase/Prolidase N-terminal domain
BED34_12795	PF01411	tRNA synthetases class II (A)
BED34_12795	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
BED34_12805	PF03848	Tellurite resistance protein TehB
BED34_12805	PF09313	Domain of unknown function (DUF1971)
BED34_12810	PF13442	Cytochrome C oxidase, cbb3-type, subunit III
BED34_12815	PF08534	Redoxin
BED34_12820	PF00005	ABC transporter
BED34_12830	PF02687	BED34_12830
BED34_12835	PF04945	YHS domain
BED34_12835	PF10080	BED34_12835
BED34_12840	PF10634	Fe2+ transport protein
BED34_12845	PF03239	BED34_12845
BED34_12860	PF04960	Glutaminase
BED34_12865	PF01261	Xylose isomerase-like TIM barrel
BED34_12870	PF00596	Class II Aldolase and Adducin N-terminal domain
BED34_12875	PF07005	Protein of unknown function, DUF1537
BED34_12875	PF17042	BED34_12875
BED34_12880	PF00455	BED34_12880
BED34_12880	PF08220	DeoR-like helix-turn-helix domain
BED34_12885	PF00989	PAS fold
BED34_12885	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BED34_12885	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
BED34_12885	PF17203	BED34_12885
BED34_12890	PF00072	Response regulator receiver domain
BED34_12895	PF03390	BED34_12895
BED34_12900	PF00324	Amino acid permease
BED34_12905	PF04343	BED34_12905
BED34_12910	PF00480	ROK family
BED34_12915	PF07690	Major Facilitator Superfamily
BED34_12920	PF08282	haloacid dehalogenase-like hydrolase
BED34_12930	PF00872	BED34_12930
BED34_12935	PF08242	Methyltransferase domain
BED34_12945	PF00872	BED34_12945
BED34_12955	PF02133	Permease for cytosine/purines, uracil, thiamine, allantoin
BED34_12960	PF08448	PAS fold
BED34_12975	PF06995	BED34_12975
BED34_12980	PF05954	Phage late control gene D protein (GPD)
BED34_12990	PF00589	Phage integrase family
BED34_12995	PF10709	BED34_12995
BED34_13000	PF05425	BED34_13000
BED34_13005	PF04234	CopC domain
BED34_13010	PF00210	Ferritin-like domain
BED34_13015	PF06440	DNA polymerase III, theta subunit
BED34_13020	PF00561	alpha/beta hydrolase fold
BED34_13025	PF00929	Exonuclease
BED34_13030	PF00326	Prolyl oligopeptidase family
BED34_13030	PF02897	Prolyl oligopeptidase, N-terminal beta-propeller domain
BED34_13035	PF13995	YebF-like protein
BED34_13040	PF04266	ASCH domain
BED34_13045	PF07130	YebG protein
BED34_13050	PF00270	DEAD/DEAH box helicase
BED34_13050	PF00271	Helicase conserved C-terminal domain
BED34_13050	PF03880	DbpA RNA binding domain
BED34_13055	PF02222	ATP-grasp domain
BED34_13060	PF03701	BED34_13060
BED34_13065	PF00425	chorismate binding enzyme
BED34_13065	PF04715	Anthranilate synthase component I, N terminal region
BED34_13070	PF00293	NUDIX domain
BED34_13075	PF03313	BED34_13075
BED34_13075	PF03315	Serine dehydratase beta chain
BED34_13080	PF01548	BED34_13080
BED34_13080	PF02371	BED34_13080
BED34_13085	PF00571	CBS domain
BED34_13085	PF03471	Transporter associated domain
BED34_13085	PF03741	BED34_13085
BED34_13090	PF03610	PTS system fructose IIA component
BED34_13090	PF03830	PTS system sorbose subfamily IIB component
BED34_13095	PF03609	BED34_13095
BED34_13100	PF03613	BED34_13100
BED34_13105	PF06173	BED34_13105
BED34_13110	PF02659	BED34_13110
BED34_13115	PF00593	TonB dependent receptor
BED34_13115	PF07715	TonB-dependent Receptor Plug Domain
BED34_13120	PF00989	PAS fold
BED34_13120	PF00990	GGDEF domain
BED34_13120	PF08448	PAS fold
BED34_13120	PF13426	PAS domain
BED34_13130	PF13847	Methyltransferase domain
BED34_13135	PF00905	Penicillin binding protein transpeptidase domain
BED34_13135	PF03717	Penicillin-binding Protein dimerisation domain
BED34_13140	PF02578	Multi-copper polyphenol oxidoreductase laccase
BED34_13145	PF00313	'Cold-shock' DNA-binding domain
BED34_13150	PF10736	BED34_13150
BED34_13155	PF07017	Antimicrobial peptide resistance and lipid A acylation protein PagP
BED34_13165	PF13269	BED34_13165
BED34_13170	PF10765	Protein of unknown function (DUF2591)
BED34_13175	PF13974	BED34_13175
BED34_13180	PF13996	BED34_13180
BED34_13185	PF10964	BED34_13185
BED34_13190	PF12833	Helix-turn-helix domain
BED34_13200	PF13520	Amino acid permease
BED34_13205	PF00583	Acetyltransferase (GNAT) family
BED34_13210	PF00005	ABC transporter
BED34_13210	PF00664	ABC transporter transmembrane region
BED34_13215	PF01163	RIO1 family
BED34_13220	PF03372	Endonuclease/Exonuclease/phosphatase family
BED34_13225	PF03498	Cytolethal distending toxin A/C family
BED34_13230	PF00990	GGDEF domain
BED34_13230	PF08447	PAS fold
BED34_13230	PF13426	PAS domain
BED34_13240	PF06411	HdeA/HdeB family
BED34_13245	PF07007	Protein of unknown function (DUF1311)
BED34_13250	PF12833	Helix-turn-helix domain
BED34_13255	PF00892	EamA-like transporter family
BED34_13265	PF03795	YCII-related domain
BED34_13270	PF01638	HxlR-like helix-turn-helix
BED34_13275	PF13460	NADH(P)-binding
BED34_13280	PF01053	Cys/Met metabolism PLP-dependent enzyme
BED34_13290	PF00717	Peptidase S24-like
BED34_13295	PF00817	impB/mucB/samB family
BED34_13295	PF11798	IMS family HHH motif
BED34_13295	PF11799	impB/mucB/samB family C-terminal domain
BED34_13295	PF13438	BED34_13295
BED34_13300	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BED34_13300	PF08447	PAS fold
BED34_13310	PF00356	Bacterial regulatory proteins, lacI family
BED34_13310	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
BED34_13315	PF00251	Glycosyl hydrolases family 32 N-terminal domain
BED34_13315	PF08244	Glycosyl hydrolases family 32 C terminal
BED34_13320	PF01306	LacY proton/sugar symporter
BED34_13325	PF04932	BED34_13325
BED34_13330	PF00535	Glycosyl transferase family 2
BED34_13335	PF00180	Isocitrate/isopropylmalate dehydrogenase
BED34_13340	PF09982	Uncharacterized protein conserved in bacteria (DUF2219)
BED34_13365	PF00180	Isocitrate/isopropylmalate dehydrogenase
BED34_13370	PF00849	RNA pseudouridylate synthase
BED34_13375	PF00293	NUDIX domain
BED34_13380	PF03054	tRNA methyl transferase
BED34_13385	PF04356	Protein of unknown function (DUF489)
BED34_13390	PF00206	Lyase
BED34_13390	PF08328	Adenylosuccinate lyase C-terminal
BED34_13395	PF13505	Outer membrane protein beta-barrel domain
BED34_13400	PF00072	Response regulator receiver domain
BED34_13400	PF00486	Transcriptional regulatory protein, C terminal
BED34_13405	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BED34_13405	PF08918	PhoQ Sensor
BED34_13415	PF01546	Peptidase family M20/M25/M40
BED34_13415	PF07687	Peptidase dimerisation domain
BED34_13420	PF02146	Sir2 family
BED34_13430	PF02687	BED34_13430
BED34_13430	PF12704	MacB-like periplasmic core domain
BED34_13435	PF00005	ABC transporter
BED34_13440	PF02687	BED34_13440
BED34_13440	PF12704	MacB-like periplasmic core domain
BED34_13445	PF00270	DEAD/DEAH box helicase
BED34_13445	PF00271	Helicase conserved C-terminal domain
BED34_13445	PF02559	CarD-like/TRCF domain
BED34_13445	PF03461	TRCF domain
BED34_13450	PF05433	BED34_13450
BED34_13455	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BED34_13460	PF05728	Uncharacterised protein family (UPF0227)
BED34_13465	PF00933	Glycosyl hydrolase family 3 N terminal domain
BED34_13470	PF01636	Phosphotransferase enzyme family
BED34_13475	PF13036	Protein of unknown function (DUF3897)
BED34_13480	PF07233	Protein of unknown function (DUF1425)
BED34_13485	PF01230	HIT domain
BED34_13490	PF08501	Shikimate dehydrogenase substrate binding domain
BED34_13495	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
BED34_13495	PF12793	BED34_13495
BED34_13500	PF04055	Radical SAM superfamily
BED34_13500	PF13394	4Fe-4S single cluster domain
BED34_13505	PF13437	HlyD family secretion protein
BED34_13510	PF00005	ABC transporter
BED34_13510	PF00664	ABC transporter transmembrane region
BED34_13510	PF03412	Peptidase C39 family
BED34_13515	PF13650	Aspartyl protease
BED34_13520	PF00367	phosphotransferase system, EIIB
BED34_13520	PF02378	Phosphotransferase system, EIIC
BED34_13525	PF01026	TatD related DNase
BED34_13530	PF09115	DNA polymerase III, delta subunit, C terminal
BED34_13530	PF13177	DNA polymerase III, delta subunit
BED34_13535	PF02223	Thymidylate kinase
BED34_13540	PF02618	YceG-like family
BED34_13545	PF01063	Aminotransferase class IV
BED34_13550	PF00109	Beta-ketoacyl synthase, N-terminal domain
BED34_13550	PF02801	Beta-ketoacyl synthase, C-terminal domain
BED34_13555	PF00550	Phosphopantetheine attachment site
BED34_13560	PF13561	Enoyl-(Acyl carrier protein) reductase
BED34_13565	PF00698	Acyl transferase domain
BED34_13570	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
BED34_13570	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
BED34_13575	PF02504	Fatty acid synthesis protein
BED34_13580	PF01783	Ribosomal L32p protein family
BED34_13585	PF02620	BED34_13585
BED34_13590	PF02545	Maf-like protein
BED34_13595	PF00849	RNA pseudouridylate synthase
BED34_13595	PF01479	S4 domain
BED34_13600	PF00575	S1 RNA binding domain
BED34_13600	PF10150	Ribonuclease E/G family
BED34_13600	PF12111	Polyribonucleotide phosphorylase C terminal
BED34_13605	PF03992	Antibiotic biosynthesis monooxygenase
BED34_13610	PF01979	Amidohydrolase family
BED34_13615	PF06183	DinI-like family
BED34_13620	PF13991	BED34_13620
BED34_13625	PF01266	FAD dependent oxidoreductase
BED34_13630	PF00196	Bacterial regulatory proteins, luxR family
BED34_13635	PF01594	BED34_13635
BED34_13640	PF00581	Rhodanese-like domain
BED34_13640	PF12368	BED34_13640
BED34_13650	PF03916	BED34_13650
BED34_13655	PF13247	4Fe-4S dicluster domain
BED34_13665	PF00072	Response regulator receiver domain
BED34_13665	PF00196	Bacterial regulatory proteins, luxR family
BED34_13670	PF03279	BED34_13670
BED34_13680	PF07681	BED34_13680
BED34_13690	PF07690	Major Facilitator Superfamily
BED34_13695	PF00854	POT family
BED34_13700	PF00535	Glycosyl transferase family 2
BED34_13705	PF04349	Periplasmic glucan biosynthesis protein, MdoG
BED34_13710	PF01757	BED34_13710
BED34_13720	PF01548	BED34_13720
BED34_13720	PF02371	BED34_13720
BED34_13725	PF00999	Sodium/hydrogen exchanger family
BED34_13725	PF02080	TrkA-C domain
BED34_13725	PF03471	Transporter associated domain
BED34_13730	PF00892	EamA-like transporter family
BED34_13735	PF00765	Autoinducer synthetase
BED34_13740	PF00196	Bacterial regulatory proteins, luxR family
BED34_13740	PF03472	Autoinducer binding domain
BED34_13755	PF08534	Redoxin
BED34_13765	PF03916	BED34_13765
BED34_13770	PF12800	4Fe-4S binding domain
BED34_13770	PF13247	4Fe-4S dicluster domain
BED34_13775	PF13435	Cytochrome c554 and c-prime
BED34_13780	PF02335	Cytochrome c552
BED34_13790	PF04358	DsrC like protein
BED34_13795	PF00708	Acylphosphatase
BED34_13800	PF07784	BED34_13800
BED34_13810	PF10672	S-adenosylmethionine-dependent methyltransferase
BED34_13815	PF08755	Hemimethylated DNA-binding protein YccV like
BED34_13820	PF13380	CoA binding domain
BED34_13825	PF09829	BED34_13825
BED34_13830	PF02142	MGS-like domain
BED34_13835	PF00580	UvrD/REP helicase N-terminal domain
BED34_13835	PF12462	BED34_13835
BED34_13835	PF13361	UvrD-like helicase C-terminal domain
BED34_13840	PF03733	BED34_13840
BED34_13845	PF12805	BED34_13845
BED34_13845	PF13515	BED34_13845
BED34_13850	PF04993	TfoX N-terminal domain
BED34_13850	PF04994	TfoX C-terminal domain
BED34_13860	PF00691	OmpA family
BED34_13860	PF01389	OmpA-like transmembrane domain
BED34_13865	PF06303	Organiser of macrodomain of Terminus of chromosome
BED34_13865	PF17414	BED34_13865
BED34_13870	PF05362	Lon protease (S16) C-terminal proteolytic domain
BED34_13870	PF13654	AAA domain
BED34_13875	PF07977	FabA-like domain
BED34_13880	PF01638	HxlR-like helix-turn-helix
BED34_13885	PF00109	Beta-ketoacyl synthase, N-terminal domain
BED34_13885	PF02801	Beta-ketoacyl synthase, C-terminal domain
BED34_13890	PF03886	Protein of unknown function (DUF330)
BED34_13895	PF02470	BED34_13895
BED34_13900	PF04403	BED34_13900
BED34_13905	PF00005	ABC transporter
BED34_13905	PF12848	ABC transporter
BED34_13905	PF16326	BED34_13905
BED34_13910	PF01170	Putative RNA methylase family UPF0020
BED34_13910	PF02926	THUMP domain
BED34_13910	PF10672	S-adenosylmethionine-dependent methyltransferase
BED34_13915	PF00111	2Fe-2S iron-sulfur cluster binding domain
BED34_13915	PF03473	MOSC domain
BED34_13915	PF03476	MOSC N-terminal beta barrel domain
BED34_13920	PF07126	BED34_13920
BED34_13925	PF01180	Dihydroorotate dehydrogenase
BED34_13930	PF01433	Peptidase family M1
BED34_13930	PF11940	Domain of unknown function (DUF3458)
BED34_13930	PF17432	BED34_13930
BED34_13935	PF04095	Nicotinate phosphoribosyltransferase (NAPRTase) family
BED34_13940	PF00152	tRNA synthetases class II (D, K and N)
BED34_13940	PF01336	OB-fold nucleic acid binding domain
BED34_13945	PF00267	Gram-negative porin
BED34_13950	PF00155	Aminotransferase class I and II
BED34_13960	PF00753	Metallo-beta-lactamase superfamily
BED34_13965	PF05951	BED34_13965
BED34_13970	PF01471	Putative peptidoglycan binding domain
BED34_13970	PF03734	L,D-transpeptidase catalytic domain
BED34_13975	PF04310	MukB N-terminal
BED34_13975	PF13558	Putative exonuclease SbcCD, C subunit
BED34_13975	PF16330	BED34_13975
BED34_13980	PF04288	MukE-like family
BED34_13985	PF03882	KicB killing factor
BED34_13985	PF17192	BED34_13985
BED34_13985	PF17193	BED34_13985
BED34_13990	PF13847	Methyltransferase domain
BED34_13995	PF02698	DUF218 domain
BED34_14000	PF03881	Fructosamine kinase
BED34_14005	PF02348	Cytidylyltransferase
BED34_14010	PF03966	Trm112p-like protein
BED34_14015	PF00313	'Cold-shock' DNA-binding domain
BED34_14020	PF00313	'Cold-shock' DNA-binding domain
BED34_14025	PF07063	Domain of unknown function (DUF1338)
BED34_14030	PF02606	Tetraacyldisaccharide-1-P 4'-kinase
BED34_14035	PF00005	ABC transporter
BED34_14035	PF00664	ABC transporter transmembrane region
BED34_14040	PF00753	Metallo-beta-lactamase superfamily
BED34_14040	PF03772	BED34_14040
BED34_14040	PF13567	BED34_14040
BED34_14045	PF00216	Bacterial DNA-binding protein
BED34_14050	PF00575	S1 RNA binding domain
BED34_14055	PF02224	Cytidylate kinase
BED34_14060	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
BED34_14065	PF00266	Aminotransferase class-V
BED34_14070	PF04239	Protein of unknown function (DUF421)
BED34_14075	PF00710	Asparaginase
BED34_14080	PF02624	YcaO-like family
BED34_14085	PF01226	Formate/nitrite transporter
BED34_14090	PF01228	Glycine radical
BED34_14090	PF02901	Pyruvate formate lyase
BED34_14095	PF04055	Radical SAM superfamily
BED34_14095	PF13353	4Fe-4S single cluster domain
BED34_14100	PF07690	Major Facilitator Superfamily
BED34_14105	PF00872	BED34_14105
BED34_14115	PF01548	BED34_14115
BED34_14115	PF02371	BED34_14115
BED34_14120	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
BED34_14120	PF02403	Seryl-tRNA synthetase N-terminal domain
BED34_14125	PF00004	ATPase family associated with various cellular activities (AAA)
BED34_14125	PF12002	MgsA AAA+ ATPase C terminal
BED34_14125	PF16193	BED34_14125
BED34_14130	PF03548	Outer membrane lipoprotein carrier protein LolA
BED34_14135	PF01580	FtsK/SpoIIIE family
BED34_14135	PF09397	Ftsk gamma domain
BED34_14135	PF13491	BED34_14135
BED34_14140	PF01037	AsnC family
BED34_14140	PF13412	Winged helix-turn-helix DNA-binding
BED34_14145	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BED34_14150	PF00005	ABC transporter
BED34_14150	PF00664	ABC transporter transmembrane region
BED34_14155	PF00005	ABC transporter
BED34_14155	PF00664	ABC transporter transmembrane region
BED34_14160	PF03588	Leucyl/phenylalanyl-tRNA protein transferase
BED34_14165	PF01176	Translation initiation factor 1A / IF-1
BED34_14170	PF00004	ATPase family associated with various cellular activities (AAA)
BED34_14170	PF02861	Clp amino terminal domain
BED34_14170	PF07724	AAA domain (Cdc48 subfamily)
BED34_14170	PF10431	C-terminal, D2-small domain, of ClpB protein
BED34_14175	PF02617	ATP-dependent Clp protease adaptor protein ClpS
BED34_14180	PF00313	'Cold-shock' DNA-binding domain
BED34_14185	PF00005	ABC transporter
BED34_14185	PF02687	BED34_14185
BED34_14185	PF12704	MacB-like periplasmic core domain
BED34_14190	PF16576	BED34_14190
BED34_14195	PF04393	BED34_14195
BED34_14200	PF11398	Protein of unknown function (DUF2813)
BED34_14205	PF03956	BED34_14205
BED34_14210	PF03063	Prismane/CO dehydrogenase family
BED34_14215	PF00111	2Fe-2S iron-sulfur cluster binding domain
BED34_14215	PF00175	Oxidoreductase NAD-binding domain
BED34_14215	PF00970	Oxidoreductase FAD-binding domain
BED34_14220	PF00205	Thiamine pyrophosphate enzyme, central domain
BED34_14220	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
BED34_14220	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
BED34_14225	PF04072	Leucine carboxyl methyltransferase
BED34_14230	PF01212	Beta-eliminating lyase
BED34_14235	PF11066	BED34_14235
BED34_14235	PF13460	NADH(P)-binding
BED34_14240	PF01370	NAD dependent epimerase/dehydratase family
BED34_14245	PF12883	Protein of unknown function (DUF3828)
BED34_14250	PF00005	ABC transporter
BED34_14255	PF00497	Bacterial extracellular solute-binding proteins, family 3
BED34_14260	PF00528	Binding-protein-dependent transport system inner membrane component
BED34_14265	PF00528	Binding-protein-dependent transport system inner membrane component
BED34_14270	PF00497	Bacterial extracellular solute-binding proteins, family 3
BED34_14275	PF05958	tRNA (Uracil-5-)-methyltransferase
BED34_14280	PF10767	BED34_14280
BED34_14285	PF00528	Binding-protein-dependent transport system inner membrane component
BED34_14290	PF00528	Binding-protein-dependent transport system inner membrane component
BED34_14295	PF00005	ABC transporter
BED34_14295	PF08402	TOBE domain
BED34_14300	PF13416	Bacterial extracellular solute-binding protein
BED34_14305	PF10722	Putative bacterial sensory transduction regulator
BED34_14310	PF07214	BED34_14310
BED34_14315	PF00462	Glutaredoxin
BED34_14320	PF02080	TrkA-C domain
BED34_14320	PF06826	BED34_14320
BED34_14325	PF01569	PAP2 superfamily
BED34_14330	PF01569	PAP2 superfamily
BED34_14335	PF01791	DeoC/LacD family aldolase
BED34_14340	PF00455	BED34_14340
BED34_14340	PF08220	DeoR-like helix-turn-helix domain
BED34_14345	PF03222	Tryptophan/tyrosine permease family
BED34_14350	PF03313	BED34_14350
BED34_14350	PF03315	Serine dehydratase beta chain
BED34_14355	PF01548	BED34_14355
BED34_14355	PF02371	BED34_14355
BED34_14360	PF00768	D-alanyl-D-alanine carboxypeptidase
BED34_14360	PF07943	Penicillin-binding protein 5, C-terminal domain
BED34_14365	PF00291	Pyridoxal-phosphate dependent enzyme
BED34_14365	PF00571	CBS domain
BED34_14370	PF01053	Cys/Met metabolism PLP-dependent enzyme
BED34_14375	PF00528	Binding-protein-dependent transport system inner membrane component
BED34_14380	PF00005	ABC transporter
BED34_14380	PF09383	NIL domain
BED34_14385	PF03180	NLPA lipoprotein
BED34_14390	PF03171	2OG-Fe(II) oxygenase superfamily
BED34_14390	PF14226	non-haem dioxygenase in morphine synthesis N-terminal
BED34_14395	PF12710	haloacid dehalogenase-like hydrolase
BED34_14400	PF00043	Glutathione S-transferase, C-terminal domain
BED34_14400	PF02798	Glutathione S-transferase, N-terminal domain
BED34_14405	PF00593	TonB dependent receptor
BED34_14405	PF07715	TonB-dependent Receptor Plug Domain
BED34_14410	PF00005	ABC transporter
BED34_14415	PF01032	FecCD transport family
BED34_14420	PF00324	Amino acid permease
BED34_14425	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BED34_14425	PF03466	LysR substrate binding domain
BED34_14440	PF03601	BED34_14440
BED34_14445	PF01261	Xylose isomerase-like TIM barrel
BED34_14450	PF00577	Outer membrane usher protein
BED34_14450	PF13953	PapC C-terminal domain
BED34_14450	PF13954	PapC N-terminal domain
BED34_14455	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
BED34_14455	PF02753	Pili assembly chaperone PapD, C-terminal domain
BED34_14465	PF17550	BED34_14465
BED34_14470	PF00486	Transcriptional regulatory protein, C terminal
BED34_14475	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
BED34_14475	PF02378	Phosphotransferase system, EIIC
BED34_14480	PF00294	pfkB family carbohydrate kinase
BED34_14485	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
BED34_14485	PF00381	PTS HPr component phosphorylation site
BED34_14490	PF00293	NUDIX domain
BED34_14495	PF03264	NapC/NirT cytochrome c family, N-terminal region
BED34_14500	PF00384	Molybdopterin oxidoreductase
BED34_14500	PF01568	Molydopterin dinucleotide binding domain
BED34_14505	PF03692	BED34_14505
BED34_14510	PF03222	Tryptophan/tyrosine permease family
BED34_14515	PF01132	Elongation factor P (EF-P) OB domain
BED34_14515	PF08207	Elongation factor P (EF-P) KOW-like domain
BED34_14515	PF09285	Elongation factor P, C-terminal
BED34_14520	PF03786	D-mannonate dehydratase (UxuA)
BED34_14530	PF01232	Mannitol dehydrogenase Rossmann domain
BED34_14530	PF08125	Mannitol dehydrogenase C-terminal domain
BED34_14535	PF00392	Bacterial regulatory proteins, gntR family
BED34_14535	PF07729	FCD domain
BED34_14545	PF02492	CobW/HypB/UreG, nucleotide-binding domain
BED34_14545	PF07683	Cobalamin synthesis protein cobW C-terminal domain
BED34_14550	PF01569	PAP2 superfamily
BED34_14555	PF00877	NlpC/P60 family
BED34_14565	PF00563	EAL domain
BED34_14565	PF12792	BED34_14565
BED34_14570	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
BED34_14575	PF00528	Binding-protein-dependent transport system inner membrane component
BED34_14580	PF00528	Binding-protein-dependent transport system inner membrane component
BED34_14580	PF12911	BED34_14580
BED34_14585	PF00005	ABC transporter
BED34_14585	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
BED34_14590	PF13989	BED34_14590
BED34_14595	PF07690	Major Facilitator Superfamily
BED34_14600	PF00849	RNA pseudouridylate synthase
BED34_14600	PF01479	S4 domain
BED34_14605	PF00271	Helicase conserved C-terminal domain
BED34_14605	PF04851	Type III restriction enzyme, res subunit
BED34_14610	PF01386	Ribosomal L25p family
BED34_14615	PF04245	BED34_14615
BED34_14620	PF07208	Protein of unknown function (DUF1414)
BED34_14625	PF00884	Sulfatase
BED34_14625	PF11893	BED34_14625
BED34_14640	PF07377	Protein of unknown function (DUF1493)
BED34_14645	PF00872	BED34_14645
BED34_14650	PF06551	BED34_14650
BED34_14655	PF01527	Transposase
BED34_14660	PF13276	BED34_14660
BED34_14670	PF00891	O-methyltransferase
BED34_14675	PF00194	Eukaryotic-type carbonic anhydrase
BED34_14680	PF00232	Glycosyl hydrolase family 1
BED34_14685	PF00367	phosphotransferase system, EIIB
BED34_14685	PF02378	Phosphotransferase system, EIIC
BED34_14690	PF01380	SIS domain
BED34_14690	PF01418	Helix-turn-helix domain, rpiR family
BED34_14700	PF10828	BED34_14700
BED34_14710	PF06530	BED34_14710
BED34_14715	PF00717	Peptidase S24-like
BED34_14715	PF01381	Helix-turn-helix
BED34_14720	PF06183	DinI-like family
BED34_14725	PF01278	Omptin family
BED34_14730	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BED34_14730	PF00672	HAMP domain
BED34_14730	PF02743	Cache domain
BED34_14735	PF12706	Beta-lactamase superfamily domain
BED34_14740	PF13347	MFS/sugar transport protein
BED34_14745	PF00144	Beta-lactamase
BED34_14760	PF00267	Gram-negative porin
BED34_14765	PF00529	HlyD family secretion protein
BED34_14770	PF13533	Biotin-lipoyl like
BED34_14775	PF07690	Major Facilitator Superfamily
BED34_14780	PF01627	Hpt domain
BED34_14780	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BED34_14780	PF16359	BED34_14780
BED34_14785	PF00072	Response regulator receiver domain
BED34_14785	PF00196	Bacterial regulatory proteins, luxR family
BED34_14790	PF00072	Response regulator receiver domain
BED34_14790	PF00512	His Kinase A (phospho-acceptor) domain
BED34_14790	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BED34_14790	PF09456	RcsC Alpha-Beta-Loop (ABL)
BED34_14795	PF00521	DNA gyrase/topoisomerase IV, subunit A
BED34_14795	PF03989	DNA gyrase C-terminal domain, beta-propeller
BED34_14800	PF13489	Methyltransferase domain
BED34_14805	PF00317	Ribonucleotide reductase, all-alpha domain
BED34_14805	PF02867	Ribonucleotide reductase, barrel domain
BED34_14805	PF03477	ATP cone domain
BED34_14810	PF00268	Ribonucleotide reductase, small chain
BED34_14820	PF03974	Ecotin
BED34_14835	PF00994	Probable molybdopterin binding domain
BED34_14840	PF03222	Tryptophan/tyrosine permease family
BED34_14845	PF07437	BED34_14845
BED34_14850	PF00199	Catalase
BED34_14850	PF06628	Catalase-related immune-responsive
BED34_14855	PF00501	AMP-binding enzyme
BED34_14855	PF13193	AMP-binding enzyme C-terminal domain
BED34_14860	PF13378	Enolase C-terminal domain-like
BED34_14865	PF00378	Enoyl-CoA hydratase/isomerase family
BED34_14870	PF12697	Alpha/beta hydrolase family
BED34_14875	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
BED34_14875	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
BED34_14875	PF16582	BED34_14875
BED34_14880	PF00425	chorismate binding enzyme
BED34_14885	PF05957	BED34_14885
BED34_14890	PF00920	Dehydratase family
BED34_14895	PF03928	Domain of unknown function (DUF336)
BED34_14900	PF07690	Major Facilitator Superfamily
BED34_14905	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
BED34_14905	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
BED34_14910	PF00356	Bacterial regulatory proteins, lacI family
BED34_14910	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
BED34_14915	PF00106	short chain dehydrogenase
BED34_14920	PF01202	Shikimate kinase
BED34_14925	PF04074	Domain of unknown function (DUF386)
BED34_14930	PF06496	BED34_14930
BED34_14940	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
BED34_14945	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
BED34_14950	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
BED34_14950	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
BED34_14955	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
BED34_14960	PF00499	NADH-ubiquinone/plastoquinone oxidoreductase chain 6
BED34_14965	PF12838	4Fe-4S dicluster domain
BED34_14970	PF00146	NADH dehydrogenase
BED34_14975	PF00384	Molybdopterin oxidoreductase
BED34_14975	PF01568	Molydopterin dinucleotide binding domain
BED34_14975	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
BED34_14975	PF10588	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
BED34_14975	PF13510	2Fe-2S iron-sulfur cluster binding domain
BED34_14980	PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit
BED34_14980	PF10589	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
BED34_14985	PF01257	Thioredoxin-like [2Fe-2S] ferredoxin
BED34_14990	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
BED34_14990	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
BED34_14995	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
BED34_15000	PF00507	NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
BED34_15005	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BED34_15005	PF03466	LysR substrate binding domain
BED34_15010	PF00155	Aminotransferase class I and II
BED34_15015	PF13023	HD domain
BED34_15020	PF02080	TrkA-C domain
BED34_15020	PF03600	Citrate transporter
BED34_15030	PF13419	Haloacid dehalogenase-like hydrolase
BED34_15035	PF03887	YfbU domain
BED34_15040	PF04217	BED34_15040
BED34_15045	PF00871	Acetokinase family
BED34_15050	PF01515	Phosphate acetyl/butaryl transferase
BED34_15050	PF07085	DRTGG domain
BED34_15050	PF13500	AAA domain
BED34_15055	PF00356	Bacterial regulatory proteins, lacI family
BED34_15055	PF13377	Periplasmic binding protein-like domain
BED34_15060	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
BED34_15065	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
BED34_15070	PF03611	BED34_15070
BED34_15075	PF01548	BED34_15075
BED34_15075	PF02371	BED34_15075
BED34_15080	PF00293	NUDIX domain
BED34_15090	PF00563	EAL domain
BED34_15095	PF01370	NAD dependent epimerase/dehydratase family
BED34_15095	PF08338	Domain of unknown function (DUF1731)
BED34_15105	PF00005	ABC transporter
BED34_15110	PF00528	Binding-protein-dependent transport system inner membrane component
BED34_15115	PF00528	Binding-protein-dependent transport system inner membrane component
BED34_15120	PF00497	Bacterial extracellular solute-binding proteins, family 3
BED34_15125	PF02441	Flavoprotein
BED34_15130	PF00156	Phosphoribosyl transferase domain
BED34_15130	PF13522	Glutamine amidotransferase domain
BED34_15135	PF02674	BED34_15135
BED34_15140	PF05036	Sporulation related domain
BED34_15145	PF02875	Mur ligase family, glutamate ligase domain
BED34_15145	PF08245	Mur ligase middle domain
BED34_15150	PF01039	Carboxyl transferase domain
BED34_15155	PF09335	BED34_15155
BED34_15160	PF01416	tRNA pseudouridine synthase
BED34_15165	PF01118	Semialdehyde dehydrogenase, NAD binding domain
BED34_15165	PF02774	Semialdehyde dehydrogenase, dimerisation domain
BED34_15170	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
BED34_15170	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
BED34_15170	PF11890	Domain of unknown function (DUF3410)
BED34_15175	PF07883	Cupin domain
BED34_15175	PF12833	Helix-turn-helix domain
BED34_15185	PF00892	EamA-like transporter family
BED34_15190	PF00155	Aminotransferase class I and II
BED34_15190	PF00392	Bacterial regulatory proteins, gntR family
BED34_15195	PF00578	AhpC/TSA family
BED34_15200	PF13462	Thioredoxin
BED34_15205	PF02683	BED34_15205
BED34_15205	PF11412	Disulphide bond corrector protein DsbC
BED34_15205	PF13899	Thioredoxin-like
BED34_15220	PF03600	Citrate transporter
BED34_15225	PF00328	Histidine phosphatase superfamily (branch 2)
BED34_15230	PF00356	Bacterial regulatory proteins, lacI family
BED34_15230	PF13377	Periplasmic binding protein-like domain
BED34_15235	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
BED34_15240	PF02378	Phosphotransferase system, EIIC
BED34_15245	PF00232	Glycosyl hydrolase family 1
BED34_15250	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit
BED34_15255	PF02264	LamB porin
BED34_15260	PF01177	Asp/Glu/Hydantoin racemase
BED34_15270	PF00109	Beta-ketoacyl synthase, N-terminal domain
BED34_15270	PF02801	Beta-ketoacyl synthase, C-terminal domain
BED34_15275	PF01266	FAD dependent oxidoreductase
BED34_15275	PF05430	S-adenosyl-L-methionine-dependent methyltransferase
BED34_15280	PF08891	BED34_15280
BED34_15285	PF04315	BED34_15285
BED34_15290	PF01925	BED34_15290
BED34_15295	PF03411	Penicillin-insensitive murein endopeptidase
BED34_15300	PF01264	Chorismate synthase
BED34_15305	PF05175	Methyltransferase small domain
BED34_15310	PF01713	Smr domain
BED34_15315	PF00300	Histidine phosphatase superfamily (branch 1)
BED34_15320	PF00378	Enoyl-CoA hydratase/isomerase family
BED34_15320	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
BED34_15320	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
BED34_15325	PF00108	Thiolase, N-terminal domain
BED34_15325	PF02803	Thiolase, C-terminal domain
BED34_15330	PF04175	Protein of unknown function (DUF406)
BED34_15335	PF03349	Outer membrane protein transport protein (OMPP1/FadL/TodX)
BED34_15340	PF04333	BED34_15340
BED34_15345	PF14559	Tetratricopeptide repeat
BED34_15350	PF03918	Cytochrome C biogenesis protein
BED34_15355	PF08534	Redoxin
BED34_15360	PF01578	BED34_15360
BED34_15360	PF16327	BED34_15360
BED34_15365	PF03100	CcmE
BED34_15370	PF04995	BED34_15370
BED34_15375	PF01578	BED34_15375
BED34_15380	PF03379	BED34_15380
BED34_15385	PF00005	ABC transporter
BED34_15390	PF01548	BED34_15390
BED34_15390	PF02371	BED34_15390
BED34_15395	PF01226	Formate/nitrite transporter
BED34_15405	PF00589	Phage integrase family
BED34_15405	PF13356	Domain of unknown function (DUF4102)
BED34_15415	PF04606	BED34_15415
BED34_15420	PF06048	BED34_15420
BED34_15420	PF08273	Zinc-binding domain of primase-helicase
BED34_15420	PF13362	Toprim domain
BED34_15440	PF05929	BED34_15440
BED34_15445	PF05125	BED34_15445
BED34_15455	PF05930	Prophage CP4-57 regulatory protein (AlpA)
BED34_15465	PF03831	PhnA protein
BED34_15465	PF08274	PhnA Zinc-Ribbon
BED34_15470	PF03551	Transcriptional regulator PadR-like family
BED34_15475	PF12977	Domain of Unknown Function with PDB structure (DUF3861)
BED34_15480	PF00232	Glycosyl hydrolase family 1
BED34_15485	PF00367	phosphotransferase system, EIIB
BED34_15485	PF02378	Phosphotransferase system, EIIC
BED34_15490	PF00356	Bacterial regulatory proteins, lacI family
BED34_15490	PF13377	Periplasmic binding protein-like domain
BED34_15495	PF04264	YceI-like domain
BED34_15500	PF01292	Prokaryotic cytochrome b561
BED34_15505	PF07859	alpha/beta hydrolase fold
BED34_15515	PF03886	Protein of unknown function (DUF330)
BED34_15520	PF02470	BED34_15520
BED34_15525	PF00005	ABC transporter
BED34_15530	PF02405	BED34_15530
BED34_15535	PF07690	Major Facilitator Superfamily
BED34_15540	PF00440	Bacterial regulatory proteins, tetR family
BED34_15540	PF13977	Bacterial transcriptional repressor
BED34_15545	PF07969	Amidohydrolase family
BED34_15550	PF00324	Amino acid permease
BED34_15555	PF13406	Transglycosylase SLT domain
BED34_15560	PF13343	Bacterial extracellular solute-binding protein
BED34_15565	PF00528	Binding-protein-dependent transport system inner membrane component
BED34_15570	PF00005	ABC transporter
BED34_15580	PF09900	BED34_15580
BED34_15585	PF15970	BED34_15585
BED34_15590	PF01292	Prokaryotic cytochrome b561
BED34_15595	PF00155	Aminotransferase class I and II
BED34_15600	PF13302	Acetyltransferase (GNAT) domain
BED34_15605	PF07350	Protein of unknown function (DUF1479)
BED34_15615	PF00072	Response regulator receiver domain
BED34_15615	PF04397	LytTr DNA-binding domain
BED34_15625	PF02685	Glucokinase
BED34_15630	PF05232	BED34_15630
BED34_15635	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BED34_15635	PF03466	LysR substrate binding domain
BED34_15640	PF00205	Thiamine pyrophosphate enzyme, central domain
BED34_15640	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
BED34_15640	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
BED34_15645	PF00248	Aldo/keto reductase family
BED34_15650	PF10697	BED34_15650
BED34_15655	PF01566	BED34_15655
BED34_15660	PF01773	Na+ dependent nucleoside transporter N-terminus
BED34_15660	PF07662	Na+ dependent nucleoside transporter C-terminus
BED34_15660	PF07670	Nucleoside recognition
BED34_15690	PF00749	tRNA synthetases class I (E and Q), catalytic domain
BED34_15705	PF06042	Bacterial protein of unknown function (DUF925)
BED34_15710	PF14282	BED34_15710
BED34_15715	PF12843	BED34_15715
BED34_15720	PF00533	BRCA1 C Terminus (BRCT) domain
BED34_15720	PF01653	NAD-dependent DNA ligase adenylation domain
BED34_15720	PF03119	NAD-dependent DNA ligase C4 zinc finger domain
BED34_15720	PF03120	NAD-dependent DNA ligase OB-fold domain
BED34_15720	PF12826	Helix-hairpin-helix motif
BED34_15720	PF14520	Helix-hairpin-helix domain
BED34_15725	PF04354	ZipA, C-terminal FtsZ-binding domain
BED34_15730	PF07264	Etoposide-induced protein 2
BED34_15735	PF00291	Pyridoxal-phosphate dependent enzyme
BED34_15740	PF00381	PTS HPr component phosphorylation site
BED34_15745	PF00391	PEP-utilising enzyme, mobile domain
BED34_15745	PF02896	PEP-utilising enzyme, TIM barrel domain
BED34_15745	PF05524	PEP-utilising enzyme, N-terminal
BED34_15750	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
BED34_15755	PF00512	His Kinase A (phospho-acceptor) domain
BED34_15755	PF00672	HAMP domain
BED34_15755	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BED34_15760	PF00072	Response regulator receiver domain
BED34_15760	PF00486	Transcriptional regulatory protein, C terminal
BED34_15765	PF16576	BED34_15765
BED34_15770	PF00005	ABC transporter
BED34_15770	PF02687	BED34_15770
BED34_15770	PF12704	MacB-like periplasmic core domain
BED34_15775	PF00291	Pyridoxal-phosphate dependent enzyme
BED34_15780	PF00005	ABC transporter
BED34_15785	PF00528	Binding-protein-dependent transport system inner membrane component
BED34_15790	PF00528	Binding-protein-dependent transport system inner membrane component
BED34_15795	PF13531	Bacterial extracellular solute-binding protein
BED34_15800	PF07690	Major Facilitator Superfamily
BED34_15805	PF01380	SIS domain
BED34_15805	PF01418	Helix-turn-helix domain, rpiR family
BED34_15810	PF04074	Domain of unknown function (DUF386)
BED34_15815	PF00480	ROK family
BED34_15820	PF04131	Putative N-acetylmannosamine-6-phosphate epimerase
BED34_15825	PF00701	Dihydrodipicolinate synthetase family
BED34_15830	PF01548	BED34_15830
BED34_15830	PF02371	BED34_15830
BED34_15835	PF04261	Dyp-type peroxidase family
BED34_15840	PF06572	Protein of unknown function (DUF1131)
BED34_15845	PF04076	Bacterial OB fold (BOF) protein
BED34_15850	PF00583	Acetyltransferase (GNAT) family
BED34_15855	PF01218	Coproporphyrinogen III oxidase
BED34_15860	PF02639	BED34_15860
BED34_15870	PF00390	Malic enzyme, N-terminal domain
BED34_15870	PF01515	Phosphate acetyl/butaryl transferase
BED34_15870	PF03949	Malic enzyme, NAD binding domain
BED34_15875	PF00293	NUDIX domain
BED34_15885	PF03892	Nitrate reductase cytochrome c-type subunit (NapB)
BED34_15890	PF00384	Molybdopterin oxidoreductase
BED34_15890	PF01568	Molydopterin dinucleotide binding domain
BED34_15890	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
BED34_15890	PF10518	TAT (twin-arginine translocation) pathway signal sequence
BED34_15895	PF03927	NapD protein
BED34_15900	PF12838	4Fe-4S dicluster domain
BED34_15900	PF13187	4Fe-4S dicluster domain
BED34_15905	PF00072	Response regulator receiver domain
BED34_15905	PF00196	Bacterial regulatory proteins, luxR family
BED34_15910	PF09904	Winged helix-turn helix
BED34_15915	PF00873	AcrB/AcrD/AcrF family
BED34_15925	PF02624	YcaO-like family
BED34_15930	PF12688	Tetratrico peptide repeat
BED34_15935	PF03960	ArsC family
BED34_15940	PF01546	Peptidase family M20/M25/M40
BED34_15940	PF07687	Peptidase dimerisation domain
BED34_15945	PF02557	D-alanyl-D-alanine carboxypeptidase
BED34_15950	PF13980	BED34_15950
BED34_15965	PF13505	Outer membrane protein beta-barrel domain
BED34_15980	PF01548	BED34_15980
BED34_15980	PF02371	BED34_15980
BED34_15985	PF03245	BED34_15985
BED34_15990	PF02230	Phospholipase/Carboxylesterase
BED34_16005	PF05127	Helicase
BED34_16005	PF08351	Domain of unknown function (DUF1726)
BED34_16005	PF13718	GNAT acetyltransferase 2
BED34_16005	PF17176	BED34_16005
BED34_16010	PF04284	BED34_16010
BED34_16015	PF04228	BED34_16015
BED34_16020	PF01259	SAICAR synthetase
BED34_16025	PF06804	NlpB/DapX lipoprotein
BED34_16030	PF00701	Dihydrodipicolinate synthetase family
BED34_16035	PF13740	ACT domain
BED34_16040	PF00578	AhpC/TSA family
BED34_16045	PF01594	BED34_16045
BED34_16050	PF01435	Peptidase family M48
BED34_16050	PF14559	Tetratricopeptide repeat
BED34_16055	PF03960	ArsC family
BED34_16060	PF00308	Bacterial dnaA  protein
BED34_16065	PF00860	Permease family
BED34_16070	PF14681	Uracil phosphoribosyltransferase
BED34_16080	PF00551	Formyl transferase
BED34_16085	PF13302	Acetyltransferase (GNAT) domain
BED34_16095	PF00005	ABC transporter
BED34_16100	PF00528	Binding-protein-dependent transport system inner membrane component
BED34_16105	PF00528	Binding-protein-dependent transport system inner membrane component
BED34_16110	PF02503	Polyphosphate kinase middle domain
BED34_16110	PF13089	Polyphosphate kinase N-terminal domain
BED34_16110	PF13090	Polyphosphate kinase C-terminal domain
BED34_16115	PF02541	Ppx/GppA phosphatase family
BED34_16120	PF11119	BED34_16120
BED34_16130	PF00563	EAL domain
BED34_16130	PF00990	GGDEF domain
BED34_16130	PF05231	BED34_16130
BED34_16130	PF08447	PAS fold
BED34_16130	PF08448	PAS fold
BED34_16135	PF00012	Hsp70 protein
BED34_16140	PF13437	HlyD family secretion protein
BED34_16140	PF13533	Biotin-lipoyl like
BED34_16145	PF00873	AcrB/AcrD/AcrF family
BED34_16150	PF00873	AcrB/AcrD/AcrF family
BED34_16155	PF07690	Major Facilitator Superfamily
BED34_16160	PF00512	His Kinase A (phospho-acceptor) domain
BED34_16160	PF00672	HAMP domain
BED34_16160	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BED34_16165	PF00072	Response regulator receiver domain
BED34_16165	PF00486	Transcriptional regulatory protein, C terminal
BED34_16170	PF07411	Domain of unknown function (DUF1508)
BED34_16175	PF01136	BED34_16175
BED34_16175	PF16325	BED34_16175
BED34_16180	PF00781	Diacylglycerol kinase catalytic domain
BED34_16185	PF03608	BED34_16185
BED34_16190	PF03612	BED34_16190
BED34_16190	PF07663	BED34_16190
BED34_16195	PF03829	PTS system glucitol/sorbitol-specific IIA component
BED34_16200	PF00106	short chain dehydrogenase
BED34_16205	PF06923	BED34_16205
BED34_16210	PF00455	BED34_16210
BED34_16210	PF08220	DeoR-like helix-turn-helix domain
BED34_16215	PF00571	CBS domain
BED34_16215	PF01380	SIS domain
BED34_16220	PF08816	Inhibitor of vertebrate lysozyme (Ivy)
BED34_16230	PF08543	Phosphomethylpyrimidine kinase
BED34_16245	PF03864	Phage major capsid protein E
BED34_16260	PF00872	BED34_16260
BED34_16290	PF00589	Phage integrase family
BED34_16300	PF01548	BED34_16300
BED34_16300	PF02371	BED34_16300
BED34_16305	PF00034	Cytochrome c
BED34_16305	PF13442	Cytochrome C oxidase, cbb3-type, subunit III
BED34_16315	PF12318	BED34_16315
BED34_16325	PF00117	Glutamine amidotransferase class-I
BED34_16325	PF00958	GMP synthase C terminal domain
BED34_16325	PF02540	NAD synthase
BED34_16330	PF00478	IMP dehydrogenase / GMP reductase domain
BED34_16330	PF00571	CBS domain
BED34_16335	PF02601	BED34_16335
BED34_16335	PF13742	BED34_16335
BED34_16340	PF07191	zinc-ribbons
BED34_16345	PF03547	BED34_16345
BED34_16350	PF01548	BED34_16350
BED34_16350	PF02371	BED34_16350
BED34_16355	PF01926	50S ribosome-binding GTPase
BED34_16355	PF14714	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
BED34_16365	PF13360	PQQ-like domain
BED34_16375	PF03129	Anticodon binding domain
BED34_16375	PF13393	Histidyl-tRNA synthetase
BED34_16380	PF04551	GcpE protein
BED34_16385	PF13413	Helix-turn-helix domain
BED34_16385	PF13464	BED34_16385
BED34_16390	PF13181	Tetratricopeptide repeat
BED34_16395	PF04055	Radical SAM superfamily
BED34_16400	PF00334	Nucleoside diphosphate kinase
BED34_16410	PF00905	Penicillin binding protein transpeptidase domain
BED34_16410	PF00912	Transglycosylase
BED34_16410	PF06832	BED34_16410
BED34_16415	PF00207	Alpha-2-macroglobulin family
BED34_16415	PF01835	MG2 domain
BED34_16415	PF07703	Alpha-2-macroglobulin family N-terminal region
BED34_16415	PF10569	Alpha-macro-globulin thiol-ester bond-forming region
BED34_16415	PF11974	Alpha-2-macroglobulin MG1 domain
BED34_16420	PF03212	Pertactin
BED34_16420	PF03797	Autotransporter beta-domain
BED34_16425	PF07179	BED34_16425
BED34_16425	PF14581	BED34_16425
BED34_16430	PF00883	Cytosol aminopeptidase family, catalytic domain
BED34_16430	PF12404	BED34_16430
BED34_16435	PF04384	Iron-sulphur cluster assembly
BED34_16440	PF00111	2Fe-2S iron-sulfur cluster binding domain
BED34_16445	PF00012	Hsp70 protein
BED34_16450	PF00226	DnaJ domain
BED34_16450	PF07743	HSCB C-terminal oligomerisation domain
BED34_16455	PF01521	Iron-sulphur cluster biosynthesis
BED34_16460	PF01592	NifU-like N terminal domain
BED34_16465	PF00266	Aminotransferase class-V
BED34_16470	PF02082	Transcriptional regulator
BED34_16475	PF00588	SpoU rRNA Methylase family
BED34_16480	PF00459	Inositol monophosphatase family
BED34_16485	PF03824	BED34_16485
BED34_16490	PF06226	BED34_16490
BED34_16500	PF12832	MFS_1 like family
BED34_16505	PF00464	Serine hydroxymethyltransferase
BED34_16510	PF00042	Globin
BED34_16510	PF00175	Oxidoreductase NAD-binding domain
BED34_16510	PF00970	Oxidoreductase FAD-binding domain
BED34_16515	PF14502	Helix-turn-helix domain
BED34_16515	PF14503	YhfZ C-terminal domain
BED34_16520	PF00874	PRD domain
BED34_16525	PF01168	Alanine racemase, N-terminal domain
BED34_16530	PF02126	Phosphotriesterase family
BED34_16535	PF10941	BED34_16535
BED34_16545	PF00543	Nitrogen regulatory protein P-II
BED34_16550	PF00795	Carbon-nitrogen hydrolase
BED34_16550	PF02540	NAD synthase
BED34_16555	PF00072	Response regulator receiver domain
BED34_16555	PF00158	Sigma-54 interaction domain
BED34_16560	PF13942	BED34_16560
BED34_16565	PF00512	His Kinase A (phospho-acceptor) domain
BED34_16565	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BED34_16575	PF02769	AIR synthase related protein, C-terminal domain
BED34_16575	PF13507	CobB/CobQ-like glutamine amidotransferase domain
BED34_16580	PF00497	Bacterial extracellular solute-binding proteins, family 3
BED34_16580	PF01464	Transglycosylase SLT domain
BED34_16585	PF14437	BED34_16585
BED34_16590	PF09925	BED34_16590
BED34_16595	PF12710	haloacid dehalogenase-like hydrolase
BED34_16600	PF01380	SIS domain
BED34_16605	PF01380	SIS domain
BED34_16605	PF01418	Helix-turn-helix domain, rpiR family
BED34_16610	PF12838	4Fe-4S dicluster domain
BED34_16620	PF01648	4'-phosphopantetheinyl transferase superfamily
BED34_16625	PF03740	Pyridoxal phosphate biosynthesis protein PdxJ
BED34_16630	PF02565	Recombination protein O C terminal
BED34_16630	PF11967	Recombination protein O N terminal
BED34_16635	PF01926	50S ribosome-binding GTPase
BED34_16635	PF07650	KH domain
BED34_16640	PF00035	Double-stranded RNA binding motif
BED34_16640	PF14622	Ribonuclease-III-like
BED34_16645	PF00717	Peptidase S24-like
BED34_16645	PF10502	Signal peptidase, peptidase S26
BED34_16650	PF00009	Elongation factor Tu GTP binding domain
BED34_16650	PF00679	Elongation factor G C-terminus
BED34_16650	PF03144	Elongation factor Tu domain 2
BED34_16650	PF06421	GTP-binding protein LepA C-terminus
BED34_16660	PF04246	BED34_16660
BED34_16665	PF03888	MucB/RseB family
BED34_16665	PF17188	BED34_16665
BED34_16670	PF03872	Anti sigma-E protein RseA, N-terminal domain
BED34_16670	PF03873	Anti sigma-E protein RseA, C-terminal domain
BED34_16675	PF04542	Sigma-70 region 2
BED34_16675	PF08281	Sigma-70, region 4
BED34_16680	PF00890	FAD binding domain
BED34_16680	PF02910	Fumarate reductase flavoprotein C-term
BED34_16685	PF05175	Methyltransferase small domain
BED34_16690	PF00270	DEAD/DEAH box helicase
BED34_16690	PF00271	Helicase conserved C-terminal domain
BED34_16695	PF01548	BED34_16695
BED34_16695	PF02371	BED34_16695
BED34_16700	PF01548	BED34_16700
BED34_16700	PF02371	BED34_16700
BED34_16705	PF00023	Ankyrin repeat
BED34_16705	PF12796	Ankyrin repeats (3 copies)
BED34_16720	PF01228	Glycine radical
BED34_16725	PF03167	Uracil DNA glycosylase superfamily
BED34_16730	PF01025	GrpE
BED34_16735	PF01513	ATP-NAD kinase
BED34_16740	PF02463	RecF/RecN/SMC N terminal domain
BED34_16745	PF04355	SmpA / OmlA family
BED34_16750	PF03658	RnfH family Ubiquitin
BED34_16755	PF03364	Polyketide cyclase / dehydrase and lipid transport
BED34_16760	PF01668	SmpB protein
BED34_16775	PF00916	BED34_16775
BED34_16775	PF01740	STAS domain
BED34_16780	PF04794	YdjC-like protein
BED34_16785	PF07883	Cupin domain
BED34_16785	PF12833	Helix-turn-helix domain
BED34_16790	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit
BED34_16795	PF00232	Glycosyl hydrolase family 1
BED34_16800	PF02378	Phosphotransferase system, EIIC
BED34_16805	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
BED34_16815	PF01548	BED34_16815
BED34_16815	PF02371	BED34_16815
BED34_16820	PF00248	Aldo/keto reductase family
BED34_16825	PF02537	BED34_16825
BED34_16830	PF02537	BED34_16830
BED34_16835	PF02254	TrkA-N domain
BED34_16835	PF07885	Ion channel
BED34_16840	PF06411	HdeA/HdeB family
BED34_16845	PF03824	BED34_16845
BED34_16850	PF03253	Urea transporter
BED34_16855	PF01774	UreD urease accessory protein
BED34_16860	PF02492	CobW/HypB/UreG, nucleotide-binding domain
BED34_16865	PF01730	UreF
BED34_16870	PF02814	UreE urease accessory protein, N-terminal domain
BED34_16870	PF05194	UreE urease accessory protein, C-terminal domain
BED34_16875	PF00449	Urease alpha-subunit, N-terminal domain
BED34_16875	PF01979	Amidohydrolase family
BED34_16880	PF00699	Urease beta subunit
BED34_16885	PF00547	Urease, gamma subunit
BED34_16890	PF00005	ABC transporter
BED34_16895	PF00005	ABC transporter
BED34_16900	PF00528	Binding-protein-dependent transport system inner membrane component
BED34_16905	PF00528	Binding-protein-dependent transport system inner membrane component
BED34_16910	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
BED34_16925	PF00581	Rhodanese-like domain
BED34_16935	PF12833	Helix-turn-helix domain
BED34_16940	PF00313	'Cold-shock' DNA-binding domain
BED34_16945	PF04899	BED34_16945
BED34_16955	PF09400	Protein of unknown function (DUF2002)
BED34_16960	PF07690	Major Facilitator Superfamily
BED34_16965	PF12833	Helix-turn-helix domain
BED34_16970	PF03403	Platelet-activating factor acetylhydrolase, isoform II
BED34_16975	PF06392	BED34_16975
BED34_16980	PF05957	BED34_16980
BED34_16985	PF00155	Aminotransferase class I and II
BED34_16985	PF00392	Bacterial regulatory proteins, gntR family
BED34_16990	PF02627	Carboxymuconolactone decarboxylase family
BED34_16995	PF00462	Glutaredoxin
BED34_17000	PF07972	NrdI Flavodoxin like
BED34_17005	PF00317	Ribonucleotide reductase, all-alpha domain
BED34_17005	PF02867	Ribonucleotide reductase, barrel domain
BED34_17005	PF08343	Ribonucleotide reductase N-terminal
BED34_17010	PF00268	Ribonucleotide reductase, small chain
BED34_17015	PF00005	ABC transporter
BED34_17015	PF00571	CBS domain
BED34_17020	PF00528	Binding-protein-dependent transport system inner membrane component
BED34_17025	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
BED34_17035	PF00929	Exonuclease
BED34_17040	PF00075	RNase H
BED34_17045	PF08241	Methyltransferase domain
BED34_17050	PF00753	Metallo-beta-lactamase superfamily
BED34_17050	PF16123	BED34_17050
BED34_17055	PF01464	Transglycosylase SLT domain
BED34_17055	PF01476	LysM domain
BED34_17060	PF01548	BED34_17060
BED34_17060	PF02371	BED34_17060
BED34_17065	PF03372	Endonuclease/Exonuclease/phosphatase family
BED34_17070	PF07690	Major Facilitator Superfamily
BED34_17075	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BED34_17075	PF03466	LysR substrate binding domain
BED34_17080	PF00248	Aldo/keto reductase family
BED34_17090	PF00872	BED34_17090
BED34_17130	PF00005	ABC transporter
BED34_17130	PF09383	NIL domain
BED34_17135	PF00528	Binding-protein-dependent transport system inner membrane component
BED34_17140	PF03180	NLPA lipoprotein
BED34_17145	PF16358	BED34_17145
BED34_17150	PF01980	Uncharacterised protein family UPF0066
BED34_17155	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
BED34_17155	PF03129	Anticodon binding domain
BED34_17155	PF04073	Aminoacyl-tRNA editing domain
BED34_17160	PF04170	NlpE N-terminal domain
BED34_17160	PF17185	BED34_17160
BED34_17165	PF00472	RF-1 domain
BED34_17170	PF07152	YaeQ protein
BED34_17180	PF07073	Modulator of Rho-dependent transcription termination (ROF)
BED34_17185	PF00034	Cytochrome c
BED34_17190	PF01171	PP-loop family
BED34_17190	PF09179	TilS substrate binding domain
BED34_17190	PF11734	TilS substrate C-terminal domain
BED34_17195	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BED34_17200	PF01276	Orn/Lys/Arg decarboxylase, major domain
BED34_17200	PF03709	Orn/Lys/Arg decarboxylase, N-terminal domain
BED34_17200	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
BED34_17205	PF03255	Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
BED34_17210	PF01336	OB-fold nucleic acid binding domain
BED34_17210	PF02811	PHP domain
BED34_17210	PF07733	Bacterial DNA polymerase III alpha subunit
BED34_17210	PF14579	Helix-hairpin-helix motif
BED34_17215	PF01351	Ribonuclease HII
BED34_17220	PF02684	BED34_17220
BED34_17230	PF07977	FabA-like domain
BED34_17235	PF00132	Bacterial transferase hexapeptide (six repeats)
BED34_17235	PF04613	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD
BED34_17240	PF03938	Outer membrane protein (OmpH-like)
BED34_17245	PF01103	Surface antigen
BED34_17245	PF07244	Surface antigen variable number repeat
BED34_17250	PF02163	Peptidase family M50
BED34_17250	PF13180	PDZ domain
BED34_17255	PF01148	Cytidylyltransferase family
BED34_17260	PF01255	Putative undecaprenyl diphosphate synthase
BED34_17265	PF02670	1-deoxy-D-xylulose 5-phosphate reductoisomerase
BED34_17265	PF08436	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal
BED34_17265	PF13288	DXP reductoisomerase C-terminal domain
BED34_17270	PF01765	Ribosome recycling factor
BED34_17275	PF00696	Amino acid kinase family
BED34_17280	PF00889	Elongation factor TS
BED34_17285	PF00318	Ribosomal protein S2
BED34_17295	PF01842	ACT domain
BED34_17295	PF01909	Nucleotidyltransferase domain
BED34_17295	PF01966	HD domain
BED34_17295	PF08335	GlnD PII-uridylyltransferase
BED34_17300	PF00132	Bacterial transferase hexapeptide (six repeats)
BED34_17300	PF14602	Hexapeptide repeat of succinyl-transferase
BED34_17300	PF14805	Tetrahydrodipicolinate N-succinyltransferase N-terminal
BED34_17305	PF11944	BED34_17305
BED34_17310	PF00258	Flavodoxin
BED34_17315	PF00849	RNA pseudouridylate synthase
BED34_17320	PF04287	tRNA pseudouridine synthase C
BED34_17325	PF07348	Syd protein (SUKH-2)
BED34_17330	PF14489	QueF-like protein
BED34_17330	PF14819	Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term
BED34_17335	PF03641	Possible lysine decarboxylase
BED34_17335	PF11892	Domain of unknown function (DUF3412)
BED34_17335	PF14793	Domain of unknown function (DUF4478)
BED34_17340	PF01367	5'-3' exonuclease, C-terminal SAM fold
BED34_17340	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
BED34_17345	PF01548	BED34_17345
BED34_17345	PF02371	BED34_17345
BED34_17350	PF01728	FtsJ-like methyltransferase
BED34_17355	PF04241	BED34_17355
BED34_17360	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BED34_17360	PF03466	LysR substrate binding domain
BED34_17365	PF06004	Bacterial protein of unknown function (DUF903)
BED34_17370	PF00266	Aminotransferase class-V
BED34_17375	PF02657	Fe-S metabolism associated domain
BED34_17380	PF00899	ThiF family
BED34_17385	PF03562	MltA specific insert domain
BED34_17385	PF06725	3D domain
BED34_17405	PF01520	N-acetylmuramoyl-L-alanine amidase
BED34_17405	PF11741	AMIN domain
BED34_17410	PF00583	Acetyltransferase (GNAT) family
BED34_17410	PF00696	Amino acid kinase family
BED34_17415	PF13538	UvrD-like helicase C-terminal domain
BED34_17415	PF13604	AAA domain
BED34_17420	PF00580	UvrD/REP helicase N-terminal domain
BED34_17420	PF12705	PD-(D/E)XK nuclease superfamily
BED34_17420	PF13361	UvrD-like helicase C-terminal domain
BED34_17425	PF00675	Insulinase (Peptidase family M16)
BED34_17425	PF05193	Peptidase M16 inactive domain
BED34_17425	PF16187	BED34_17425
BED34_17430	PF04257	Exodeoxyribonuclease V, gamma subunit
BED34_17435	PF12528	BED34_17435
BED34_17440	PF10713	BED34_17440
BED34_17445	PF07963	Prokaryotic N-terminal methylation motif
BED34_17450	PF07963	Prokaryotic N-terminal methylation motif
BED34_17455	PF00303	Thymidylate synthase
BED34_17460	PF01790	BED34_17460
BED34_17465	PF00391	PEP-utilising enzyme, mobile domain
BED34_17465	PF01590	GAF domain
BED34_17465	PF02896	PEP-utilising enzyme, TIM barrel domain
BED34_17465	PF05524	PEP-utilising enzyme, N-terminal
BED34_17480	PF02976	DNA mismatch repair enzyme MutH
BED34_17485	PF03741	BED34_17485
BED34_17490	PF00248	Aldo/keto reductase family
BED34_17500	PF00501	AMP-binding enzyme
BED34_17500	PF01553	Acyltransferase
BED34_17500	PF13193	AMP-binding enzyme C-terminal domain
BED34_17505	PF00384	Molybdopterin oxidoreductase
BED34_17505	PF01568	Molydopterin dinucleotide binding domain
BED34_17510	PF00356	Bacterial regulatory proteins, lacI family
BED34_17510	PF13377	Periplasmic binding protein-like domain
BED34_17515	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
BED34_17515	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
BED34_17520	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BED34_17520	PF03466	LysR substrate binding domain
BED34_17535	PF00753	Metallo-beta-lactamase superfamily
BED34_17555	PF00486	Transcriptional regulatory protein, C terminal
BED34_17560	PF09691	Bacterial chaperone lipoprotein (PulS_OutS)
BED34_17575	PF05134	Type II secretion system (T2SS), protein L
BED34_17580	PF03934	Type II secretion system (T2SS), protein K
BED34_17585	PF11612	Type II secretion system (T2SS), protein J
BED34_17590	PF02501	Type II secretion system (T2SS), protein I
BED34_17595	PF07963	Prokaryotic N-terminal methylation motif
BED34_17595	PF08334	Type II secretion system (T2SS), protein G
BED34_17605	PF00437	Type II/IV secretion system protein
BED34_17610	PF00263	BED34_17610
BED34_17610	PF03958	Bacterial type II/III secretion system short domain
BED34_17615	PF11356	Type IV pilus biogenesis
BED34_17625	PF00484	Carbonic anhydrase
BED34_17630	PF01638	HxlR-like helix-turn-helix
BED34_17635	PF13561	Enoyl-(Acyl carrier protein) reductase
BED34_17640	PF13591	MerR HTH family regulatory protein
BED34_17645	PF00226	DnaJ domain
BED34_17645	PF01556	DnaJ C terminal domain
BED34_17650	PF01548	BED34_17650
BED34_17650	PF02371	BED34_17650
BED34_17655	PF00990	GGDEF domain
BED34_17655	PF08448	PAS fold
BED34_17660	PF13474	SnoaL-like domain
BED34_17665	PF02661	Fic/DOC family
BED34_17670	PF05930	Prophage CP4-57 regulatory protein (AlpA)
BED34_17675	PF00872	BED34_17675
BED34_17680	PF15731	BED34_17680
BED34_17685	PF15723	BED34_17685
BED34_17690	PF01381	Helix-turn-helix
BED34_17695	PF05016	Plasmid stabilisation system protein
BED34_17700	PF13358	DDE superfamily endonuclease
BED34_17700	PF13384	Homeodomain-like domain
BED34_17705	PF00589	Phage integrase family
BED34_17705	PF02899	Phage integrase, N-terminal SAM-like domain
BED34_17735	PF03864	Phage major capsid protein E
BED34_17745	PF13358	DDE superfamily endonuclease
BED34_17745	PF13384	Homeodomain-like domain
BED34_17765	PF04851	Type III restriction enzyme, res subunit
BED34_17780	PF00589	Phage integrase family
BED34_17790	PF00152	tRNA synthetases class II (D, K and N)
BED34_17790	PF01336	OB-fold nucleic acid binding domain
BED34_17795	PF00472	RF-1 domain
BED34_17795	PF03462	PCRF domain
BED34_17800	PF01368	DHH family
BED34_17800	PF02272	DHHA1 domain
BED34_17805	PF10411	Disulfide bond isomerase protein N-terminus
BED34_17805	PF13098	Thioredoxin-like domain
BED34_17810	PF00589	Phage integrase family
BED34_17810	PF02899	Phage integrase, N-terminal SAM-like domain
BED34_17815	PF00258	Flavodoxin
BED34_17820	PF06123	BED34_17820
BED34_17825	PF00512	His Kinase A (phospho-acceptor) domain
BED34_17825	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BED34_17825	PF14827	Sensory domain of two-component sensor kinase
BED34_17830	PF00072	Response regulator receiver domain
BED34_17830	PF00486	Transcriptional regulatory protein, C terminal
BED34_17835	PF07254	BED34_17835
BED34_17840	PF03937	Flavinator of succinate dehydrogenase
BED34_17845	PF01571	Aminomethyltransferase folate-binding domain
BED34_17850	PF01548	BED34_17850
BED34_17850	PF02371	BED34_17850
BED34_17855	PF03006	BED34_17855
BED34_17860	PF13023	HD domain
BED34_17865	PF13561	Enoyl-(Acyl carrier protein) reductase
BED34_17870	PF13924	BED34_17870
BED34_17875	PF02347	Glycine cleavage system P-protein
BED34_17880	PF01597	Glycine cleavage H-protein
BED34_17885	PF01571	Aminomethyltransferase folate-binding domain
BED34_17885	PF08669	Glycine cleavage T-protein C-terminal barrel domain
BED34_17890	PF01494	FAD binding domain
BED34_17895	PF01494	FAD binding domain
BED34_17900	PF00557	Metallopeptidase family M24
BED34_17900	PF05195	Aminopeptidase P, N-terminal domain
BED34_17905	PF03695	Uncharacterised protein family (UPF0149)
BED34_17910	PF05164	Cell division protein ZapA
BED34_17920	PF01812	5-formyltetrahydrofolate cyclo-ligase family
BED34_17925	PF00113	Enolase, C-terminal TIM barrel domain
BED34_17925	PF03952	Enolase, N-terminal domain
BED34_17930	PF00117	Glutamine amidotransferase class-I
BED34_17930	PF06418	CTP synthase N-terminus
BED34_17935	PF03819	MazG nucleotide pyrophosphohydrolase domain
BED34_17940	PF02824	TGS domain
BED34_17940	PF04607	Region found in RelA / SpoT proteins
BED34_17940	PF13291	ACT domain
BED34_17940	PF13328	HD domain
BED34_17945	PF01938	TRAM domain
BED34_17945	PF05958	tRNA (Uracil-5-)-methyltransferase
BED34_17950	PF00072	Response regulator receiver domain
BED34_17950	PF00512	His Kinase A (phospho-acceptor) domain
BED34_17950	PF01627	Hpt domain
BED34_17950	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BED34_17950	PF09984	BED34_17950
BED34_17955	PF00595	PDZ domain (Also known as DHR or GLGF)
BED34_17955	PF13180	PDZ domain
BED34_17955	PF13365	Trypsin-like peptidase domain
BED34_17960	PF01966	HD domain
BED34_17960	PF13286	Phosphohydrolase-associated domain
BED34_17965	PF01048	Phosphorylase superfamily
BED34_17970	PF01497	Periplasmic binding protein
BED34_17975	PF03458	BED34_17975
BED34_17980	PF01521	Iron-sulphur cluster biosynthesis
BED34_17985	PF00654	Voltage gated chloride channel
BED34_17990	PF00202	Aminotransferase class-III
BED34_17995	PF07690	Major Facilitator Superfamily
BED34_18000	PF01032	FecCD transport family
BED34_18005	PF01497	Periplasmic binding protein
BED34_18010	PF00005	ABC transporter
BED34_18015	PF00905	Penicillin binding protein transpeptidase domain
BED34_18015	PF00912	Transglycosylase
BED34_18015	PF14812	BED34_18015
BED34_18015	PF14814	Bifunctional transglycosylase second domain
BED34_18020	PF00270	DEAD/DEAH box helicase
BED34_18020	PF00271	Helicase conserved C-terminal domain
BED34_18020	PF04408	Helicase associated domain (HA2)
BED34_18020	PF08482	BED34_18020
BED34_18025	PF13563	2'-5' RNA ligase superfamily
BED34_18030	PF03749	Sugar fermentation stimulation protein
BED34_18035	PF01258	Prokaryotic dksA/traR C4-type zinc finger
BED34_18040	PF00749	tRNA synthetases class I (E and Q), catalytic domain
BED34_18045	PF01743	Poly A polymerase head domain
BED34_18045	PF12626	Polymerase A arginine-rich C-terminus
BED34_18045	PF12627	Probable RNA and SrmB- binding site of polymerase A
BED34_18050	PF01288	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
BED34_18055	PF02548	Ketopantoate hydroxymethyltransferase
BED34_18060	PF02569	Pantoate-beta-alanine ligase
BED34_18065	PF02261	Aspartate decarboxylase
BED34_18070	PF01522	Polysaccharide deacetylase
BED34_18075	PF01061	BED34_18075
BED34_18080	PF00005	ABC transporter
BED34_18085	PF00484	Carbonic anhydrase
BED34_18090	PF00156	Phosphoribosyl transferase domain
BED34_18095	PF00394	Multicopper oxidase
BED34_18095	PF07731	Multicopper oxidase
BED34_18095	PF07732	Multicopper oxidase
BED34_18095	PF10518	TAT (twin-arginine translocation) pathway signal sequence
BED34_18100	PF09691	Bacterial chaperone lipoprotein (PulS_OutS)
BED34_18105	PF01564	Spermine/spermidine synthase
BED34_18105	PF17284	BED34_18105
BED34_18110	PF02675	S-adenosylmethionine decarboxylase
BED34_18120	PF00892	EamA-like transporter family
BED34_18125	PF06062	BED34_18125
BED34_18135	PF00593	TonB dependent receptor
BED34_18135	PF07715	TonB-dependent Receptor Plug Domain
BED34_18140	PF12833	Helix-turn-helix domain
BED34_18150	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
BED34_18150	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BED34_18155	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
BED34_18155	PF00364	Biotin-requiring enzyme
BED34_18155	PF02817	e3 binding domain
BED34_18160	PF00456	Transketolase, thiamine diphosphate binding domain
BED34_18165	PF00392	Bacterial regulatory proteins, gntR family
BED34_18165	PF07729	FCD domain
BED34_18170	PF00324	Amino acid permease
BED34_18175	PF17113	BED34_18175
BED34_18180	PF01510	N-acetylmuramoyl-L-alanine amidase
BED34_18185	PF01729	Quinolinate phosphoribosyl transferase, C-terminal domain
BED34_18185	PF02749	Quinolinate phosphoribosyl transferase, N-terminal domain
BED34_18190	PF00114	Pilin (bacterial filament)
BED34_18190	PF07963	Prokaryotic N-terminal methylation motif
BED34_18195	PF00437	Type II/IV secretion system protein
BED34_18195	PF05157	Type II secretion system (T2SS), protein E, N-terminal domain
BED34_18200	PF00482	Type II secretion system (T2SS), protein F
BED34_18205	PF00478	IMP dehydrogenase / GMP reductase domain
BED34_18210	PF01121	Dephospho-CoA kinase
BED34_18215	PF07072	Protein of unknown function (DUF1342)
BED34_18220	PF03884	Domain of unknown function (DUF329)
BED34_18225	PF00293	NUDIX domain
BED34_18230	PF01043	SecA preprotein cross-linking domain
BED34_18230	PF02810	SEC-C motif
BED34_18230	PF07516	SecA Wing and Scaffold domain
BED34_18230	PF07517	SecA DEAD-like domain
BED34_18235	PF06558	BED34_18235
BED34_18240	PF05258	BED34_18240
BED34_18245	PF03331	UDP-3-O-acyl N-acetylglycosamine deacetylase
BED34_18250	PF00091	Tubulin/FtsZ family, GTPase domain
BED34_18250	PF12327	FtsZ family, C-terminal domain
BED34_18255	PF02491	SHS2 domain inserted in FTSA
BED34_18255	PF14450	Cell division protein FtsA
BED34_18260	PF03799	Cell division protein FtsQ
BED34_18260	PF08478	POTRA domain, FtsQ-type
BED34_18265	PF01820	D-ala D-ala ligase N-terminus
BED34_18265	PF07478	D-ala D-ala ligase C-terminus
BED34_18270	PF01225	Mur ligase family, catalytic domain
BED34_18270	PF02875	Mur ligase family, glutamate ligase domain
BED34_18270	PF08245	Mur ligase middle domain
BED34_18275	PF03033	Glycosyltransferase family 28 N-terminal domain
BED34_18275	PF04101	Glycosyltransferase family 28 C-terminal domain
BED34_18280	PF01098	BED34_18280
BED34_18285	PF02875	Mur ligase family, glutamate ligase domain
BED34_18285	PF08245	Mur ligase middle domain
BED34_18290	PF00953	Glycosyl transferase family 4
BED34_18290	PF10555	Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1
BED34_18295	PF01225	Mur ligase family, catalytic domain
BED34_18295	PF02875	Mur ligase family, glutamate ligase domain
BED34_18295	PF08245	Mur ligase middle domain
BED34_18300	PF01225	Mur ligase family, catalytic domain
BED34_18300	PF02875	Mur ligase family, glutamate ligase domain
BED34_18300	PF08245	Mur ligase middle domain
BED34_18305	PF00905	Penicillin binding protein transpeptidase domain
BED34_18305	PF03717	Penicillin-binding Protein dimerisation domain
BED34_18315	PF01795	MraW methylase family
BED34_18320	PF02381	MraZ protein
BED34_18325	PF06610	BED34_18325
BED34_18330	PF00356	Bacterial regulatory proteins, lacI family
BED34_18330	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
BED34_18335	PF01842	ACT domain
BED34_18335	PF10369	Small subunit of acetolactate synthase
BED34_18340	PF00205	Thiamine pyrophosphate enzyme, central domain
BED34_18340	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
BED34_18340	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
BED34_18345	PF00501	AMP-binding enzyme
BED34_18350	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BED34_18350	PF03466	LysR substrate binding domain
BED34_18355	PF00682	HMGL-like
BED34_18355	PF08502	LeuA allosteric (dimerisation) domain
BED34_18360	PF00180	Isocitrate/isopropylmalate dehydrogenase
BED34_18365	PF00330	Aconitase family (aconitate hydratase)
BED34_18370	PF00694	Aconitase C-terminal domain
BED34_18385	PF07690	Major Facilitator Superfamily
BED34_18390	PF01228	Glycine radical
BED34_18390	PF02901	Pyruvate formate lyase
BED34_18400	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
BED34_18400	PF12793	BED34_18400
BED34_18410	PF13988	BED34_18410
BED34_18415	PF01547	Bacterial extracellular solute-binding protein
BED34_18420	PF00528	Binding-protein-dependent transport system inner membrane component
BED34_18425	PF00005	ABC transporter
BED34_18430	PF09335	BED34_18430
BED34_18435	PF00136	DNA polymerase family B
BED34_18435	PF03104	DNA polymerase family B, exonuclease domain
BED34_18440	PF00176	SNF2 family N-terminal domain
BED34_18440	PF00271	Helicase conserved C-terminal domain
BED34_18440	PF12137	RNA polymerase recycling family C-terminal
BED34_18445	PF02369	Bacterial Ig-like domain (group 1)
BED34_18445	PF09134	Invasin, domain 3
BED34_18445	PF11924	Protein of unknown function (DUF3442)
BED34_18450	PF00849	RNA pseudouridylate synthase
BED34_18455	PF00226	DnaJ domain
BED34_18455	PF05099	Tellurite resistance protein TerB
BED34_18460	PF03968	OstA-like protein
BED34_18460	PF04453	Organic solvent tolerance protein
BED34_18465	PF00639	PPIC-type PPIASE domain
BED34_18465	PF09312	SurA N-terminal domain
BED34_18470	PF04166	Pyridoxal phosphate biosynthetic protein PdxA
BED34_18475	PF00398	Ribosomal RNA adenine dimethylase
BED34_18480	PF04379	Protein of unknown function (DUF525)
BED34_18485	PF00149	Calcineurin-like phosphoesterase
BED34_18490	PF00186	Dihydrofolate reductase
BED34_18495	PF12821	BED34_18495
BED34_18500	PF06738	BED34_18500
BED34_18505	PF01810	BED34_18505
BED34_18510	PF02142	MGS-like domain
BED34_18510	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
BED34_18510	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
BED34_18515	PF00117	Glutamine amidotransferase class-I
BED34_18515	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain
BED34_18520	PF01113	Dihydrodipicolinate reductase, N-terminus
BED34_18520	PF05173	Dihydrodipicolinate reductase, C-terminus
BED34_18525	PF02401	LytB protein
BED34_18530	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
BED34_18535	PF01252	BED34_18535
BED34_18540	PF00133	tRNA synthetases class I (I, L, M and V)
BED34_18540	PF06827	Zinc finger found in FPG and IleRS
BED34_18540	PF08264	Anticodon-binding domain of tRNA
BED34_18545	PF01687	Riboflavin kinase
BED34_18545	PF06574	FAD synthetase
BED34_18555	PF01649	Ribosomal protein S20
BED34_18560	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BED34_18560	PF03466	LysR substrate binding domain
BED34_18565	PF06965	Na+/H+ antiporter 1
BED34_18570	PF00226	DnaJ domain
BED34_18570	PF00684	DnaJ central domain
BED34_18570	PF01556	DnaJ C terminal domain
BED34_18575	PF00012	Hsp70 protein
BED34_18580	PF01184	BED34_18580
BED34_18585	PF03995	Peptidase inhibitor family I36
BED34_18590	PF07690	Major Facilitator Superfamily
BED34_18595	PF00994	Probable molybdopterin binding domain
BED34_18600	PF00923	Transaldolase
BED34_18605	PF03883	BED34_18605
BED34_18610	PF01548	BED34_18610
BED34_18610	PF02371	BED34_18610
BED34_18615	PF00291	Pyridoxal-phosphate dependent enzyme
BED34_18615	PF14821	Threonine synthase N terminus
BED34_18620	PF00288	GHMP kinases N terminal domain
BED34_18620	PF08544	GHMP kinases C terminal
BED34_18625	PF00696	Amino acid kinase family
BED34_18625	PF00742	Homoserine dehydrogenase
BED34_18625	PF01842	ACT domain
BED34_18625	PF03447	Homoserine dehydrogenase, NAD binding domain
BED34_18625	PF13840	ACT domain
BED34_18635	PF00072	Response regulator receiver domain
BED34_18635	PF00486	Transcriptional regulatory protein, C terminal
BED34_18640	PF05981	BED34_18640
BED34_18645	PF06445	GyrI-like small molecule binding domain
BED34_18645	PF12833	Helix-turn-helix domain
BED34_18650	PF00300	Histidine phosphatase superfamily (branch 1)
BED34_18660	PF01371	Trp repressor protein
BED34_18665	PF01464	Transglycosylase SLT domain
BED34_18665	PF14718	Soluble lytic murein transglycosylase L domain
BED34_18670	PF00122	E1-E2 ATPase
BED34_18670	PF00689	Cation transporting ATPase, C-terminus
BED34_18670	PF00690	Cation transporter/ATPase, N-terminus
BED34_18670	PF00702	haloacid dehalogenase-like hydrolase
BED34_18675	PF13689	BED34_18675
BED34_18680	PF00990	GGDEF domain
BED34_18680	PF17152	BED34_18680
BED34_18685	PF00691	OmpA family
BED34_18690	PF00005	ABC transporter
BED34_18690	PF12848	ABC transporter
BED34_18695	PF02661	Fic/DOC family
BED34_18695	PF13776	BED34_18695
BED34_18700	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BED34_18700	PF03466	LysR substrate binding domain
BED34_18705	PF08240	Alcohol dehydrogenase GroES-like domain
BED34_18705	PF13602	Zinc-binding dehydrogenase
BED34_18720	PF12710	haloacid dehalogenase-like hydrolase
BED34_18725	PF10144	BED34_18725
BED34_18730	PF01048	Phosphorylase superfamily
BED34_18735	PF01676	Metalloenzyme superfamily
BED34_18740	PF00591	Glycosyl transferase family, a/b domain
BED34_18740	PF02885	Glycosyl transferase family, helical bundle domain
BED34_18740	PF07831	Pyrimidine nucleoside phosphorylase C-terminal domain
BED34_18745	PF01791	DeoC/LacD family aldolase
BED34_18750	PF01773	Na+ dependent nucleoside transporter N-terminus
BED34_18750	PF07662	Na+ dependent nucleoside transporter C-terminus
BED34_18750	PF07670	Nucleoside recognition
BED34_18755	PF01026	TatD related DNase
BED34_18760	PF01734	Patatin-like phospholipase
BED34_18765	PF07043	BED34_18765
BED34_18770	PF04972	BON domain
BED34_18775	PF00009	Elongation factor Tu GTP binding domain
BED34_18775	PF03144	Elongation factor Tu domain 2
BED34_18775	PF16658	BED34_18775
BED34_18780	PF00583	Acetyltransferase (GNAT) family
BED34_18785	PF03603	DNA polymerase III psi subunit
BED34_18790	PF05175	Methyltransferase small domain
BED34_18790	PF08468	Methyltransferase small domain N-terminal
BED34_18795	PF00248	Aldo/keto reductase family
BED34_18810	PF07256	BED34_18810
BED34_18815	PF00990	GGDEF domain
BED34_18820	PF00593	TonB dependent receptor
BED34_18820	PF07715	TonB-dependent Receptor Plug Domain
BED34_18825	PF01497	Periplasmic binding protein
BED34_18830	PF00294	pfkB family carbohydrate kinase
BED34_18835	PF02264	LamB porin
BED34_18835	PF11471	BED34_18835
BED34_18840	PF00367	phosphotransferase system, EIIB
BED34_18840	PF02378	Phosphotransferase system, EIIC
BED34_18845	PF00251	Glycosyl hydrolases family 32 N-terminal domain
BED34_18845	PF08244	Glycosyl hydrolases family 32 C terminal
BED34_18850	PF00356	Bacterial regulatory proteins, lacI family
BED34_18850	PF13377	Periplasmic binding protein-like domain
BED34_18855	PF00158	Sigma-54 interaction domain
BED34_18855	PF00989	PAS fold
BED34_18855	PF02954	Bacterial regulatory protein, Fis family
BED34_18860	PF01095	Pectinesterase
BED34_18865	PF10014	2OG-Fe dioxygenase
BED34_18870	PF07690	Major Facilitator Superfamily
BED34_18885	PF13358	DDE superfamily endonuclease
BED34_18885	PF13384	Homeodomain-like domain
BED34_18890	PF02543	Carbamoyltransferase
BED34_18890	PF16861	BED34_18890
BED34_18895	PF00534	Glycosyl transferases group 1
BED34_18905	PF02734	DAK2 domain
BED34_18910	PF02733	Dak1 domain
BED34_18915	PF00465	Iron-containing alcohol dehydrogenase
BED34_18920	PF00873	AcrB/AcrD/AcrF family
BED34_18925	PF16576	BED34_18925
BED34_18930	PF02274	Amidinotransferase
BED34_18940	PF04932	BED34_18940
BED34_18945	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
BED34_18950	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
BED34_18950	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
BED34_18955	PF04198	Putative sugar-binding domain
BED34_18960	PF00005	ABC transporter
BED34_18965	PF02653	BED34_18965
BED34_18970	PF02653	BED34_18970
BED34_18975	PF13407	Periplasmic binding protein domain
BED34_18980	PF01791	DeoC/LacD family aldolase
BED34_18985	PF03992	Antibiotic biosynthesis monooxygenase
BED34_18995	PF10696	BED34_18995
BED34_19000	PF00872	BED34_19000
BED34_19005	PF06551	BED34_19005
BED34_19010	PF01527	Transposase
BED34_19030	PF03739	BED34_19030
BED34_19035	PF03739	BED34_19035
BED34_19040	PF00883	Cytosol aminopeptidase family, catalytic domain
BED34_19040	PF02789	Cytosol aminopeptidase family, N-terminal domain
BED34_19045	PF04364	DNA polymerase III chi subunit, HolC
BED34_19050	PF00133	tRNA synthetases class I (I, L, M and V)
BED34_19050	PF08264	Anticodon-binding domain of tRNA
BED34_19050	PF10458	Valyl tRNA synthetase tRNA binding arm
BED34_19055	PF00583	Acetyltransferase (GNAT) family
BED34_19060	PF06877	Regulator of ribonuclease activity B
BED34_19065	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
BED34_19065	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
BED34_19070	PF04074	Domain of unknown function (DUF386)
BED34_19075	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
BED34_19080	PF00528	Binding-protein-dependent transport system inner membrane component
BED34_19085	PF00528	Binding-protein-dependent transport system inner membrane component
BED34_19085	PF12911	BED34_19085
BED34_19090	PF00005	ABC transporter
BED34_19095	PF00005	ABC transporter
BED34_19100	PF03466	LysR substrate binding domain
BED34_19110	PF13353	4Fe-4S single cluster domain
BED34_19115	PF03865	Haemolysin secretion/activation protein ShlB/FhaC/HecB
BED34_19115	PF08479	POTRA domain, ShlB-type
BED34_19120	PF15984	BED34_19120
BED34_19125	PF00392	Bacterial regulatory proteins, gntR family
BED34_19125	PF07702	UTRA domain
BED34_19130	PF06754	BED34_19130
BED34_19135	PF05845	Bacterial phosphonate metabolism protein (PhnH)
BED34_19140	PF05861	BED34_19140
BED34_19145	PF06007	BED34_19145
BED34_19150	PF00005	ABC transporter
BED34_19155	PF00005	ABC transporter
BED34_19160	PF07969	Amidohydrolase family
BED34_19170	PF12706	Beta-lactamase superfamily domain
BED34_19180	PF05016	Plasmid stabilisation system protein
BED34_19185	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
BED34_19195	PF05426	Alginate lyase
BED34_19200	PF00005	ABC transporter
BED34_19200	PF08402	TOBE domain
BED34_19205	PF00528	Binding-protein-dependent transport system inner membrane component
BED34_19210	PF00528	Binding-protein-dependent transport system inner membrane component
BED34_19215	PF01547	Bacterial extracellular solute-binding protein
BED34_19220	PF05426	Alginate lyase
BED34_19225	PF07940	Heparinase II/III-like protein
BED34_19230	PF01276	Orn/Lys/Arg decarboxylase, major domain
BED34_19230	PF03709	Orn/Lys/Arg decarboxylase, N-terminal domain
BED34_19230	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
BED34_19235	PF13520	Amino acid permease
BED34_19245	PF00583	Acetyltransferase (GNAT) family
BED34_19250	PF02036	SCP-2 sterol transfer family
BED34_19255	PF01136	BED34_19255
BED34_19260	PF01136	BED34_19260
BED34_19265	PF03313	BED34_19265
BED34_19275	PF02321	Outer membrane efflux protein
BED34_19275	PF13533	Biotin-lipoyl like
BED34_19280	PF00296	Luciferase-like monooxygenase
BED34_19290	PF00270	DEAD/DEAH box helicase
BED34_19290	PF00271	Helicase conserved C-terminal domain
BED34_19290	PF03880	DbpA RNA binding domain
BED34_19290	PF12343	BED34_19290
BED34_19295	PF07719	Tetratricopeptide repeat
BED34_19295	PF13181	Tetratricopeptide repeat
BED34_19300	PF00013	KH domain
BED34_19300	PF00575	S1 RNA binding domain
BED34_19300	PF01138	3' exoribonuclease family, domain 1
BED34_19300	PF03725	3' exoribonuclease family, domain 2
BED34_19300	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
BED34_19305	PF00312	Ribosomal protein S15
BED34_19310	PF01509	TruB family pseudouridylate synthase (N terminal domain)
BED34_19310	PF09157	Pseudouridine synthase II TruB, C-terminal
BED34_19310	PF16198	BED34_19310
BED34_19315	PF02033	Ribosome-binding factor A
BED34_19320	PF00009	Elongation factor Tu GTP binding domain
BED34_19320	PF03144	Elongation factor Tu domain 2
BED34_19320	PF04760	Translation initiation factor IF-2, N-terminal region
BED34_19320	PF08364	BED34_19320
BED34_19320	PF11987	Translation-initiation factor 2
BED34_19325	PF08529	NusA N-terminal domain
BED34_19325	PF13184	NusA-like KH domain
BED34_19325	PF14520	Helix-hairpin-helix domain
BED34_19330	PF02576	Uncharacterised BCR, YhbC family COG0779
BED34_19330	PF17384	BED34_19330
BED34_19345	PF03840	Preprotein translocase SecG subunit
BED34_19350	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
BED34_19350	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
BED34_19350	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
BED34_19350	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
BED34_19355	PF00809	Pterin binding enzyme
BED34_19360	PF00004	ATPase family associated with various cellular activities (AAA)
BED34_19360	PF01434	Peptidase family M41
BED34_19360	PF06480	FtsH Extracellular
BED34_19365	PF01728	FtsJ-like methyltransferase
BED34_19370	PF01985	CRS1 / YhbY (CRM) domain
BED34_19375	PF01272	Transcription elongation factor, GreA/GreB, C-term
BED34_19375	PF03449	Transcription elongation factor, N-terminal
BED34_19380	PF02113	D-Ala-D-Ala carboxypeptidase 3 (S13) family
BED34_19385	PF00072	Response regulator receiver domain
BED34_19385	PF00486	Transcriptional regulatory protein, C terminal
BED34_19390	PF00512	His Kinase A (phospho-acceptor) domain
BED34_19390	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BED34_19395	PF01018	GTP1/OBG
BED34_19395	PF01926	50S ribosome-binding GTPase
BED34_19400	PF00892	EamA-like transporter family
BED34_19405	PF01016	Ribosomal L27 protein
BED34_19410	PF00829	Ribosomal prokaryotic L21 protein
BED34_19415	PF00348	Polyprenyl synthetase
BED34_19420	PF02316	Mu DNA-binding domain
BED34_19425	PF13693	Winged helix-turn-helix DNA-binding
BED34_19430	PF00056	lactate/malate dehydrogenase, NAD binding domain
BED34_19430	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
BED34_19435	PF01316	Arginine repressor, DNA binding domain
BED34_19435	PF02863	Arginine repressor, C-terminal domain
BED34_19440	PF07338	Protein of unknown function (DUF1471)
BED34_19445	PF01225	Mur ligase family, catalytic domain
BED34_19445	PF02875	Mur ligase family, glutamate ligase domain
BED34_19445	PF08245	Mur ligase middle domain
BED34_19450	PF00316	Fructose-1-6-bisphosphatase
BED34_19455	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BED34_19455	PF02203	Tar ligand binding domain homologue
BED34_19460	PF00719	Inorganic pyrophosphatase
BED34_19465	PF06094	AIG2-like family
BED34_19470	PF04357	BED34_19470
BED34_19475	PF01103	Surface antigen
BED34_19475	PF07244	Surface antigen variable number repeat
BED34_19475	PF17243	BED34_19475
BED34_19480	PF01625	Peptide methionine sulfoxide reductase
BED34_19485	PF00571	CBS domain
BED34_19485	PF01595	BED34_19485
BED34_19485	PF03471	Transporter associated domain
BED34_19490	PF06526	Protein of unknown function (DUF1107)
BED34_19495	PF09695	BED34_19495
BED34_19500	PF00459	Inositol monophosphatase family
BED34_19505	PF00149	Calcineurin-like phosphoesterase
BED34_19505	PF02872	5'-nucleotidase, C-terminal domain
BED34_19515	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
BED34_19515	PF01346	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
BED34_19520	PF04225	Opacity-associated protein A LysM-like domain
BED34_19520	PF08525	BED34_19520
BED34_19525	PF12582	BED34_19525
BED34_19530	PF01281	Ribosomal protein L9, N-terminal domain
BED34_19530	PF03948	Ribosomal protein L9, C-terminal domain
BED34_19535	PF01084	Ribosomal protein S18
BED34_19540	PF00436	Single-strand binding protein family
BED34_19545	PF01250	Ribosomal protein S6
BED34_19550	PF07338	Protein of unknown function (DUF1471)
BED34_19555	PF00326	Prolyl oligopeptidase family
BED34_19560	PF07338	Protein of unknown function (DUF1471)
BED34_19565	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
BED34_19570	PF01548	BED34_19570
BED34_19570	PF02371	BED34_19570
BED34_19575	PF00588	SpoU rRNA Methylase family
BED34_19575	PF08032	RNA 2'-O ribose methyltransferase substrate binding
BED34_19580	PF00575	S1 RNA binding domain
BED34_19580	PF00773	RNB domain
BED34_19580	PF08206	Ribonuclease B OB domain
BED34_19580	PF08461	Ribonuclease R winged-helix domain
BED34_19585	PF02082	Transcriptional regulator
BED34_19590	PF00709	Adenylosuccinate synthetase
BED34_19595	PF09838	BED34_19595
BED34_19600	PF01145	SPFH domain / Band 7 family
BED34_19605	PF01145	SPFH domain / Band 7 family
BED34_19605	PF12221	BED34_19605
BED34_19610	PF01926	50S ribosome-binding GTPase
BED34_19610	PF13167	BED34_19610
BED34_19610	PF16360	BED34_19610
BED34_19615	PF17209	BED34_19615
BED34_19620	PF01715	IPP transferase
BED34_19625	PF01119	DNA mismatch repair protein, C-terminal domain
BED34_19625	PF08676	MutL C terminal dimerisation domain
BED34_19625	PF13589	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BED34_19630	PF01476	LysM domain
BED34_19630	PF01520	N-acetylmuramoyl-L-alanine amidase
BED34_19630	PF11741	AMIN domain
BED34_19635	PF02367	Uncharacterised P-loop hydrolase UPF0079
BED34_19640	PF01256	Carbohydrate kinase
BED34_19640	PF03853	YjeF-related protein N-terminus
BED34_19645	PF08331	BED34_19645
BED34_19645	PF13484	BED34_19645
BED34_19660	PF00929	Exonuclease
BED34_19665	PF03193	Protein of unknown function, DUF258
BED34_19670	PF02666	BED34_19670
BED34_19675	PF00924	Mechanosensitive ion channel
BED34_19675	PF12794	BED34_19675
BED34_19675	PF12795	BED34_19675
BED34_19680	PF00152	tRNA synthetases class II (D, K and N)
BED34_19685	PF00890	FAD binding domain
BED34_19685	PF02910	Fumarate reductase flavoprotein C-term
BED34_19690	PF13085	2Fe-2S iron-sulfur cluster binding domain
BED34_19690	PF13183	4Fe-4S dicluster domain
BED34_19695	PF02300	Fumarate reductase subunit C
BED34_19700	PF02313	Fumarate reductase subunit D
BED34_19705	PF08212	Lipocalin-like domain
BED34_19710	PF00893	Small Multidrug Resistance protein
BED34_19715	PF08085	BED34_19715
BED34_19720	PF01132	Elongation factor P (EF-P) OB domain
BED34_19720	PF08207	Elongation factor P (EF-P) KOW-like domain
BED34_19720	PF09285	Elongation factor P, C-terminal
BED34_19725	PF04055	Radical SAM superfamily
BED34_19725	PF13353	4Fe-4S single cluster domain
BED34_19730	PF13698	BED34_19730
BED34_19740	PF00118	TCP-1/cpn60 chaperonin family
BED34_19745	PF00166	Chaperonin 10 Kd subunit
BED34_19750	PF04186	BED34_19750
BED34_19755	PF00206	Lyase
BED34_19755	PF10415	Fumarase C C-terminus
BED34_19760	PF03605	BED34_19760
BED34_19765	PF03091	CutA1 divalent ion tolerance protein
BED34_19770	PF02683	BED34_19770
BED34_19770	PF11412	Disulphide bond corrector protein DsbC
BED34_19770	PF13899	Thioredoxin-like
BED34_19775	PF02595	Glycerate kinase family
BED34_19780	PF00440	Bacterial regulatory proteins, tetR family
BED34_19790	PF01228	Glycine radical
BED34_19790	PF02901	Pyruvate formate lyase
BED34_19795	PF00871	Acetokinase family
BED34_19800	PF01490	BED34_19800
BED34_19805	PF00291	Pyridoxal-phosphate dependent enzyme
BED34_19810	PF04055	Radical SAM superfamily
BED34_19815	PF06228	Haem utilisation ChuX/HutX
BED34_19820	PF13460	NADH(P)-binding
BED34_19825	PF10636	Hemin uptake protein hemP
BED34_19830	PF00593	TonB dependent receptor
BED34_19830	PF07715	TonB-dependent Receptor Plug Domain
BED34_19835	PF05171	Haemin-degrading HemS
BED34_19840	PF01497	Periplasmic binding protein
BED34_19845	PF01032	FecCD transport family
BED34_19850	PF00005	ABC transporter
BED34_19860	PF06568	BED34_19860
BED34_19865	PF00593	TonB dependent receptor
BED34_19865	PF07715	TonB-dependent Receptor Plug Domain
BED34_19880	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
BED34_19890	PF00005	ABC transporter
BED34_19890	PF06472	BED34_19890
BED34_19895	PF07660	Secretin and TonB N terminus short domain
BED34_19895	PF07715	TonB-dependent Receptor Plug Domain
BED34_19900	PF04773	FecR protein
BED34_19900	PF16220	BED34_19900
BED34_19905	PF04542	Sigma-70 region 2
BED34_19905	PF08281	Sigma-70, region 4
BED34_19910	PF03544	Gram-negative bacterial TonB protein C-terminal
BED34_19915	PF01206	Sulfurtransferase TusA
BED34_19920	PF04143	BED34_19920
BED34_19925	PF01312	FlhB HrpN YscU SpaS Family
BED34_19930	PF01311	BED34_19930
BED34_19935	PF01313	BED34_19935
BED34_19940	PF00813	BED34_19940
BED34_19945	PF01052	Surface presentation of antigens (SPOA)
BED34_19945	PF06622	BED34_19945
BED34_19960	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
BED34_19965	PF00771	FHIPEP family
BED34_19975	PF07201	HrpJ-like domain
BED34_19975	PF09059	TyeA
BED34_19985	PF13327	BED34_19985
BED34_19990	PF01514	Secretory protein of YscJ/FliF family
BED34_20000	PF06287	BED34_20000
BED34_20005	PF09392	Type III secretion needle MxiH like
BED34_20010	PF12833	Helix-turn-helix domain
BED34_20025	PF09621	BED34_20025
BED34_20030	PF05802	BED34_20030
BED34_20035	PF04888	BED34_20035
BED34_20045	PF03433	EspA-like secreted protein
BED34_20055	PF08988	Protein of unknown function (DUF1895)
BED34_20060	PF16693	BED34_20060
BED34_20065	PF00263	BED34_20065
BED34_20065	PF03958	Bacterial type II/III secretion system short domain
BED34_20080	PF00072	Response regulator receiver domain
BED34_20080	PF00196	Bacterial regulatory proteins, luxR family
BED34_20085	PF00375	Sodium:dicarboxylate symporter family
BED34_20090	PF00501	AMP-binding enzyme
BED34_20090	PF13193	AMP-binding enzyme C-terminal domain
BED34_20090	PF16177	BED34_20090
BED34_20095	PF04341	BED34_20095
BED34_20100	PF00474	Sodium:solute symporter family
BED34_20145	PF01808	AICARFT/IMPCHase bienzyme
BED34_20145	PF02142	MGS-like domain
BED34_20150	PF01071	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
BED34_20150	PF02843	Phosphoribosylglycinamide synthetase, C domain
BED34_20150	PF02844	Phosphoribosylglycinamide synthetase, N domain
BED34_20155	PF07356	BED34_20155
BED34_20160	PF00216	Bacterial DNA-binding protein
BED34_20165	PF04222	Protein of unknown function (DUF416)
BED34_20170	PF04493	Endonuclease V
BED34_20175	PF01208	Uroporphyrinogen decarboxylase (URO-D)
BED34_20180	PF00293	NUDIX domain
BED34_20180	PF09297	NADH pyrophosphatase zinc ribbon domain
BED34_20185	PF04353	Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ
BED34_20190	PF01964	ThiC family
BED34_20190	PF13667	ThiC-associated domain
BED34_20195	PF02581	Thiamine monophosphate synthase/TENI
BED34_20200	PF00899	ThiF family
BED34_20205	PF02597	ThiS family
BED34_20210	PF05690	Thiazole biosynthesis protein ThiG
BED34_20215	PF04055	Radical SAM superfamily
BED34_20215	PF06968	Biotin and Thiamin Synthesis associated domain
BED34_20220	PF01548	BED34_20220
BED34_20220	PF02371	BED34_20220
BED34_20225	PF00623	RNA polymerase Rpb1, domain 2
BED34_20225	PF04983	RNA polymerase Rpb1, domain 3
BED34_20225	PF04997	RNA polymerase Rpb1, domain 1
BED34_20225	PF04998	RNA polymerase Rpb1, domain 5
BED34_20225	PF05000	RNA polymerase Rpb1, domain 4
BED34_20230	PF00562	RNA polymerase Rpb2, domain 6
BED34_20230	PF04560	RNA polymerase Rpb2, domain 7
BED34_20230	PF04561	RNA polymerase Rpb2, domain 2
BED34_20230	PF04563	RNA polymerase beta subunit
BED34_20230	PF04565	RNA polymerase Rpb2, domain 3
BED34_20230	PF10385	RNA polymerase beta subunit external 1 domain
BED34_20235	PF00542	Ribosomal protein L7/L12 C-terminal domain
BED34_20235	PF16320	BED34_20235
BED34_20240	PF00466	Ribosomal protein L10
BED34_20245	PF00687	Ribosomal protein L1p/L10e family
BED34_20250	PF00298	Ribosomal protein L11, RNA binding domain
BED34_20250	PF03946	Ribosomal protein L11, N-terminal domain
BED34_20255	PF00467	KOW motif
BED34_20255	PF02357	Transcription termination factor nusG
BED34_20260	PF00584	SecE/Sec61-gamma subunits of protein translocation complex
BED34_20265	PF00009	Elongation factor Tu GTP binding domain
BED34_20265	PF03143	Elongation factor Tu C-terminal domain
BED34_20265	PF03144	Elongation factor Tu domain 2
BED34_20300	PF00485	Phosphoribulokinase / Uridine kinase family
BED34_20305	PF02237	Biotin protein ligase C terminal domain
BED34_20305	PF03099	Biotin/lipoate A/B protein ligase family
BED34_20305	PF08279	HTH domain
BED34_20310	PF01565	FAD binding domain
BED34_20310	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
BED34_20315	PF02371	BED34_20315
BED34_20320	PF13518	Helix-turn-helix domain
BED34_20345	PF12724	Flavodoxin domain
BED34_20350	PF02386	Cation transport protein
BED34_20355	PF01205	Uncharacterized protein family UPF0029
BED34_20355	PF09186	Domain of unknown function (DUF1949)
BED34_20360	PF00557	Metallopeptidase family M24
BED34_20365	PF00378	Enoyl-CoA hydratase/isomerase family
BED34_20365	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
BED34_20365	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
BED34_20370	PF00108	Thiolase, N-terminal domain
BED34_20370	PF02803	Thiolase, C-terminal domain
BED34_20375	PF00175	Oxidoreductase NAD-binding domain
BED34_20375	PF00970	Oxidoreductase FAD-binding domain
BED34_20380	PF01977	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
BED34_20385	PF02357	Transcription termination factor nusG
BED34_20390	PF00490	Delta-aminolevulinic acid dehydratase
BED34_20395	PF01026	TatD related DNase
BED34_20400	PF00902	Sec-independent protein translocase protein (TatC)
BED34_20410	PF02416	mttA/Hcf106 family
BED34_20415	PF03109	BED34_20415
BED34_20420	PF02036	SCP-2 sterol transfer family
BED34_20425	PF01209	ubiE/COQ5 methyltransferase family
BED34_20440	PF02554	BED34_20440
BED34_20440	PF13722	BED34_20440
BED34_20445	PF13350	Tyrosine phosphatase family
BED34_20450	PF01048	Phosphorylase superfamily
BED34_20455	PF01738	Dienelactone hydrolase family
BED34_20460	PF01717	Cobalamin-independent synthase, Catalytic domain
BED34_20460	PF08267	Cobalamin-independent synthase, N-terminal domain
BED34_20465	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BED34_20465	PF03466	LysR substrate binding domain
BED34_20470	PF00892	EamA-like transporter family
BED34_20475	PF03547	BED34_20475
BED34_20480	PF03009	Glycerophosphoryl diester phosphodiesterase family
BED34_20485	PF00005	ABC transporter
BED34_20485	PF08402	TOBE domain
BED34_20490	PF00528	Binding-protein-dependent transport system inner membrane component
BED34_20495	PF00528	Binding-protein-dependent transport system inner membrane component
BED34_20500	PF13416	Bacterial extracellular solute-binding protein
BED34_20505	PF04449	CS1 type fimbrial major subunit
BED34_20510	PF16967	BED34_20510
BED34_20515	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
BED34_20535	PF00005	ABC transporter
BED34_20540	PF00005	ABC transporter
BED34_20540	PF12399	Branched-chain amino acid ATP-binding cassette transporter
BED34_20545	PF02653	BED34_20545
BED34_20545	PF11862	BED34_20545
BED34_20550	PF02653	BED34_20550
BED34_20555	PF13458	Periplasmic binding protein
BED34_20560	PF12568	Acetyltransferase (GNAT) domain
BED34_20575	PF00140	Sigma-70 factor, region 1
BED34_20575	PF04542	Sigma-70 region 2
BED34_20575	PF04545	Sigma-70, region 4
BED34_20580	PF02687	BED34_20580
BED34_20585	PF00005	ABC transporter
BED34_20590	PF00448	SRP54-type protein, GTPase domain
BED34_20590	PF02881	SRP54-type protein, helical bundle domain
BED34_20595	PF03602	Conserved hypothetical protein 95
BED34_20600	PF06611	BED34_20600
BED34_20605	PF10694	Protein of unknown function (DUF2500)
BED34_20610	PF08850	BED34_20610
BED34_20615	PF07947	BED34_20615
BED34_20620	PF00122	E1-E2 ATPase
BED34_20620	PF00403	Heavy-metal-associated domain
BED34_20620	PF00702	haloacid dehalogenase-like hydrolase
BED34_20625	PF01206	Sulfurtransferase TusA
BED34_20630	PF02592	BED34_20630
BED34_20635	PF08786	Domain of unknown function (DUF1795)
BED34_20640	PF02754	BED34_20640
BED34_20640	PF13183	4Fe-4S dicluster domain
BED34_20645	PF00890	FAD binding domain
BED34_20650	PF01266	FAD dependent oxidoreductase
BED34_20650	PF04324	BFD-like [2Fe-2S] binding domain
BED34_20655	PF07690	Major Facilitator Superfamily
BED34_20660	PF03009	Glycerophosphoryl diester phosphodiesterase family
BED34_20665	PF08282	haloacid dehalogenase-like hydrolase
BED34_20670	PF12146	Putative lysophospholipase
BED34_20675	PF01810	BED34_20675
BED34_20680	PF01810	BED34_20680
BED34_20685	PF00270	DEAD/DEAH box helicase
BED34_20685	PF00271	Helicase conserved C-terminal domain
BED34_20685	PF00570	HRDC domain
BED34_20685	PF09382	RQC domain
BED34_20685	PF16124	BED34_20685
BED34_20690	PF02253	Phospholipase A1
BED34_20695	PF03061	Thioesterase superfamily
BED34_20700	PF00892	EamA-like transporter family
BED34_20705	PF01544	CorA-like Mg2+ transporter protein
BED34_20710	PF09370	TIM-barrel signal transduction protein
BED34_20715	PF06792	Uncharacterised protein family (UPF0261)
BED34_20720	PF00440	Bacterial regulatory proteins, tetR family
BED34_20725	PF00580	UvrD/REP helicase N-terminal domain
BED34_20725	PF13361	UvrD-like helicase C-terminal domain
BED34_20730	PF13419	Haloacid dehalogenase-like hydrolase
BED34_20735	PF00589	Phage integrase family
BED34_20735	PF02899	Phage integrase, N-terminal SAM-like domain
BED34_20740	PF04340	Protein of unknown function, DUF484
BED34_20745	PF01678	Diaminopimelate epimerase
BED34_20750	PF13627	BED34_20750
BED34_20755	PF01491	Frataxin-like domain
BED34_20760	PF13454	FAD-NAD(P)-binding
BED34_20765	PF01295	BED34_20765
BED34_20765	PF12633	BED34_20765
BED34_20770	PF01379	Porphobilinogen deaminase, dipyromethane cofactor binding domain
BED34_20770	PF03900	Porphobilinogen deaminase, C-terminal domain
BED34_20775	PF02602	Uroporphyrinogen-III synthase HemD
BED34_20780	PF04375	BED34_20780
BED34_20785	PF07219	BED34_20785
BED34_20790	PF01548	BED34_20790
BED34_20790	PF02371	BED34_20790
BED34_20820	PF03808	BED34_20820
BED34_20825	PF06899	BED34_20825
BED34_20830	PF07429	BED34_20830
BED34_20835	PF01943	BED34_20835
BED34_20840	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
BED34_20845	PF00583	Acetyltransferase (GNAT) family
BED34_20850	PF00483	Nucleotidyl transferase
BED34_20855	PF16363	BED34_20855
BED34_20860	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
BED34_20860	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
BED34_20860	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
BED34_20865	PF02350	UDP-N-acetylglucosamine 2-epimerase
BED34_20870	PF02706	Chain length determinant protein
BED34_20875	PF00953	Glycosyl transferase family 4
BED34_20880	PF01548	BED34_20880
BED34_20880	PF02371	BED34_20880
BED34_20885	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
BED34_20885	PF07497	Rho termination factor, RNA-binding domain
BED34_20885	PF07498	Rho termination factor, N-terminal domain
BED34_20890	PF00085	Thioredoxin
BED34_20895	PF00270	DEAD/DEAH box helicase
BED34_20895	PF00271	Helicase conserved C-terminal domain
BED34_20900	PF02541	Ppx/GppA phosphatase family
BED34_20905	PF00295	Glycosyl hydrolases family 28
BED34_20910	PF00580	UvrD/REP helicase N-terminal domain
BED34_20910	PF13361	UvrD-like helicase C-terminal domain
BED34_20915	PF13616	PPIC-type PPIASE domain
BED34_20925	PF13358	DDE superfamily endonuclease
BED34_20925	PF13384	Homeodomain-like domain
BED34_20930	PF08843	Nucleotidyl transferase of unknown function (DUF1814)
BED34_20945	PF02661	Fic/DOC family
BED34_20945	PF13784	Fic/DOC family N-terminal
BED34_20950	PF03288	Poxvirus D5 protein-like
BED34_20950	PF08273	Zinc-binding domain of primase-helicase
BED34_20950	PF08706	BED34_20950
BED34_20950	PF13362	Toprim domain
BED34_20955	PF05973	BED34_20955
BED34_20960	PF05930	Prophage CP4-57 regulatory protein (AlpA)
BED34_20980	PF00589	Phage integrase family
BED34_20980	PF13356	Domain of unknown function (DUF4102)
BED34_20985	PF12833	Helix-turn-helix domain
BED34_20985	PF13377	Periplasmic binding protein-like domain
BED34_20990	PF02653	BED34_20990
BED34_20995	PF00005	ABC transporter
BED34_21000	PF13407	Periplasmic binding protein domain
BED34_21010	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
BED34_21010	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
BED34_21015	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
BED34_21015	PF02753	Pili assembly chaperone PapD, C-terminal domain
BED34_21020	PF00857	Isochorismatase family
BED34_21025	PF01965	DJ-1/PfpI family
BED34_21025	PF12833	Helix-turn-helix domain
BED34_21030	PF01757	BED34_21030
BED34_21035	PF07690	Major Facilitator Superfamily
BED34_21040	PF00009	Elongation factor Tu GTP binding domain
BED34_21040	PF09106	Elongation factor SelB, winged helix
BED34_21040	PF09107	Elongation factor SelB, winged helix
BED34_21045	PF03841	L-seryl-tRNA selenium transferase
BED34_21045	PF12390	BED34_21045
BED34_21050	PF04216	Protein involved in formate dehydrogenase formation
BED34_21055	PF01292	Prokaryotic cytochrome b561
BED34_21060	PF09163	Formate dehydrogenase N, transmembrane
BED34_21060	PF13247	4Fe-4S dicluster domain
BED34_21065	PF00384	Molybdopterin oxidoreductase
BED34_21065	PF01568	Molydopterin dinucleotide binding domain
BED34_21070	PF00384	Molybdopterin oxidoreductase
BED34_21070	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
BED34_21075	PF02634	FdhD/NarQ family
BED34_21080	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
BED34_21080	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
BED34_21085	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BED34_21085	PF00672	HAMP domain
BED34_21085	PF16591	BED34_21085
BED34_21090	PF03473	MOSC domain
BED34_21090	PF03475	3-alpha domain
BED34_21095	PF01850	PIN domain
BED34_21100	PF04014	Antidote-toxin recognition MazE
BED34_21105	PF10928	Protein of unknown function (DUF2810)
BED34_21110	PF00155	Aminotransferase class I and II
BED34_21110	PF00392	Bacterial regulatory proteins, gntR family
BED34_21115	PF01810	BED34_21115
BED34_21120	PF05068	Mannitol repressor
BED34_21125	PF01232	Mannitol dehydrogenase Rossmann domain
BED34_21125	PF08125	Mannitol dehydrogenase C-terminal domain
BED34_21130	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
BED34_21130	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
BED34_21130	PF02378	Phosphotransferase system, EIIC
BED34_21135	PF11254	BED34_21135
BED34_21140	PF02092	BED34_21140
BED34_21140	PF05746	DALR anticodon binding domain
BED34_21145	PF02091	Glycyl-tRNA synthetase alpha subunit
BED34_21150	PF03352	Methyladenine glycosylase
BED34_21155	PF13673	Acetyltransferase (GNAT) domain
BED34_21165	PF08964	Beta/Gamma crystallin
BED34_21180	PF07690	Major Facilitator Superfamily
BED34_21185	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
BED34_21185	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
BED34_21190	PF00128	Alpha amylase, catalytic domain
BED34_21195	PF00155	Aminotransferase class I and II
BED34_21200	PF02080	TrkA-C domain
BED34_21200	PF06826	BED34_21200
BED34_21205	PF01548	BED34_21205
BED34_21205	PF02371	BED34_21205
BED34_21210	PF07690	Major Facilitator Superfamily
BED34_21225	PF00175	Oxidoreductase NAD-binding domain
BED34_21225	PF00970	Oxidoreductase FAD-binding domain
BED34_21230	PF05656	BED34_21230
BED34_21235	PF07305	BED34_21235
BED34_21240	PF00121	Triosephosphate isomerase
BED34_21245	PF15644	Papain fold toxin 1
BED34_21250	PF13531	Bacterial extracellular solute-binding protein
BED34_21255	PF00365	Phosphofructokinase
BED34_21260	PF01545	Cation efflux family
BED34_21260	PF16916	BED34_21260
BED34_21265	PF07813	LTXXQ motif family protein
BED34_21270	PF00072	Response regulator receiver domain
BED34_21270	PF00486	Transcriptional regulatory protein, C terminal
BED34_21275	PF00512	His Kinase A (phospho-acceptor) domain
BED34_21275	PF00672	HAMP domain
BED34_21275	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BED34_21275	PF16527	BED34_21275
BED34_21280	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
BED34_21280	PF02805	Metal binding domain of Ada
BED34_21280	PF12833	Helix-turn-helix domain
BED34_21285	PF00588	SpoU rRNA Methylase family
BED34_21290	PF00132	Bacterial transferase hexapeptide (six repeats)
BED34_21290	PF06426	Serine acetyltransferase, N-terminal
BED34_21295	PF01210	NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
BED34_21295	PF07479	NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
BED34_21300	PF02556	Preprotein translocase subunit SecB
BED34_21305	PF00462	Glutaredoxin
BED34_21310	PF00581	Rhodanese-like domain
BED34_21315	PF01676	Metalloenzyme superfamily
BED34_21315	PF06415	BPG-independent PGAM N-terminus (iPGM_N)
BED34_21320	PF01551	Peptidase family M23
BED34_21325	PF04748	Divergent polysaccharide deacetylase
BED34_21340	PF00107	Zinc-binding dehydrogenase
BED34_21340	PF08240	Alcohol dehydrogenase GroES-like domain
BED34_21345	PF00155	Aminotransferase class I and II
BED34_21350	PF01370	NAD dependent epimerase/dehydratase family
BED34_21355	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
BED34_21360	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
BED34_21365	PF00534	Glycosyl transferases group 1
BED34_21365	PF04413	3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)
BED34_21370	PF00535	Glycosyl transferase family 2
BED34_21375	PF01467	Cytidylyltransferase
BED34_21380	PF01149	Formamidopyrimidine-DNA glycosylase N-terminal domain
BED34_21380	PF06827	Zinc finger found in FPG and IleRS
BED34_21380	PF06831	Formamidopyrimidine-DNA glycosylase H2TH domain
BED34_21385	PF00471	Ribosomal protein L33
BED34_21390	PF00830	Ribosomal L28 family
BED34_21395	PF04002	RadC-like JAB domain
BED34_21400	PF02441	Flavoprotein
BED34_21400	PF04127	DNA / pantothenate metabolism flavoprotein
BED34_21405	PF00692	dUTPase
BED34_21410	PF00440	Bacterial regulatory proteins, tetR family
BED34_21415	PF00156	Phosphoribosyl transferase domain
BED34_21420	PF01138	3' exoribonuclease family, domain 1
BED34_21420	PF03725	3' exoribonuclease family, domain 2
BED34_21425	PF03755	BED34_21425
BED34_21425	PF08340	BED34_21425
BED34_21430	PF00589	Phage integrase family
BED34_21430	PF13356	Domain of unknown function (DUF4102)
BED34_21440	PF05930	Prophage CP4-57 regulatory protein (AlpA)
BED34_21450	PF08346	BED34_21450
BED34_21470	PF13973	BED34_21470
BED34_21480	PF06048	BED34_21480
BED34_21480	PF08273	Zinc-binding domain of primase-helicase
BED34_21480	PF13362	Toprim domain
BED34_21515	PF04326	Divergent AAA domain
BED34_21520	PF00753	Metallo-beta-lactamase superfamily
BED34_21530	PF00563	EAL domain
BED34_21530	PF00990	GGDEF domain
BED34_21530	PF13426	PAS domain
BED34_21535	PF00378	Enoyl-CoA hydratase/isomerase family
BED34_21540	PF01773	Na+ dependent nucleoside transporter N-terminus
BED34_21540	PF07662	Na+ dependent nucleoside transporter C-terminus
BED34_21545	PF13358	DDE superfamily endonuclease
BED34_21545	PF13384	Homeodomain-like domain
BED34_21555	PF03458	BED34_21555
BED34_21565	PF00625	Guanylate kinase
BED34_21570	PF01192	RNA polymerase Rpb6
BED34_21575	PF02824	TGS domain
BED34_21575	PF04607	Region found in RelA / SpoT proteins
BED34_21575	PF13291	ACT domain
BED34_21575	PF13328	HD domain
BED34_21580	PF00588	SpoU rRNA Methylase family
BED34_21580	PF12105	SpoU, rRNA methylase, C-terminal
BED34_21585	PF00270	DEAD/DEAH box helicase
BED34_21585	PF00271	Helicase conserved C-terminal domain
BED34_21585	PF17191	BED34_21585
BED34_21590	PF03616	BED34_21590
BED34_21595	PF00860	Permease family
BED34_21605	PF00196	Bacterial regulatory proteins, luxR family
BED34_21605	PF08448	PAS fold
BED34_21610	PF00196	Bacterial regulatory proteins, luxR family
BED34_21610	PF08448	PAS fold
BED34_21615	PF13693	Winged helix-turn-helix DNA-binding
BED34_21620	PF00583	Acetyltransferase (GNAT) family
BED34_21620	PF09500	Putative thioesterase (yiiD_Cterm)
BED34_21625	PF02580	D-Tyr-tRNA(Tyr) deacylase
BED34_21630	PF03631	BED34_21630
BED34_21635	PF13419	Haloacid dehalogenase-like hydrolase
BED34_21640	PF00009	Elongation factor Tu GTP binding domain
BED34_21640	PF00679	Elongation factor G C-terminus
BED34_21640	PF03144	Elongation factor Tu domain 2
BED34_21645	PF00120	Glutamine synthetase, catalytic domain
BED34_21645	PF03951	Glutamine synthetase, beta-Grasp domain
BED34_21655	PF00512	His Kinase A (phospho-acceptor) domain
BED34_21655	PF00989	PAS fold
BED34_21655	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BED34_21660	PF00072	Response regulator receiver domain
BED34_21660	PF00158	Sigma-54 interaction domain
BED34_21660	PF02954	Bacterial regulatory protein, Fis family
BED34_21665	PF04055	Radical SAM superfamily
BED34_21665	PF06969	HemN C-terminal domain
BED34_21670	PF04220	BED34_21670
BED34_21675	PF01926	50S ribosome-binding GTPase
BED34_21680	PF00476	DNA polymerase family A
BED34_21680	PF01367	5'-3' exonuclease, C-terminal SAM fold
BED34_21680	PF01612	3'-5' exonuclease
BED34_21680	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
BED34_21685	PF01323	DSBA-like thioredoxin domain
BED34_21690	PF01636	Phosphotransferase enzyme family
BED34_21695	PF06288	Protein of unknown function (DUF1040)
BED34_21700	PF12804	MobA-like NTP transferase domain
BED34_21705	PF03205	Molybdopterin guanine dinucleotide synthesis protein B
BED34_21710	PF00665	Integrase core domain
BED34_21715	PF13518	Helix-turn-helix domain
BED34_21740	PF00392	Bacterial regulatory proteins, gntR family
BED34_21740	PF07729	FCD domain
BED34_21745	PF07690	Major Facilitator Superfamily
BED34_21750	PF00356	Bacterial regulatory proteins, lacI family
BED34_21750	PF13377	Periplasmic binding protein-like domain
BED34_21755	PF00294	pfkB family carbohydrate kinase
BED34_21760	PF13407	Periplasmic binding protein domain
BED34_21765	PF02653	BED34_21765
BED34_21770	PF00005	ABC transporter
BED34_21775	PF05025	RbsD / FucU transport protein family
BED34_21780	PF02705	BED34_21780
BED34_21785	PF07728	AAA domain (dynein-related subfamily)
BED34_21785	PF12592	Protein of unknown function (DUF3763)
BED34_21790	PF05762	VWA domain containing CoxE-like protein
BED34_21795	PF07077	BED34_21795
BED34_21800	PF03590	Aspartate-ammonia ligase
BED34_21805	PF01037	AsnC family
BED34_21805	PF13404	AsnC-type helix-turn-helix domain
BED34_21810	PF00258	Flavodoxin
BED34_21815	PF01134	Glucose inhibited division protein A
BED34_21815	PF13932	GidA associated domain 3
BED34_21820	PF02527	rRNA small subunit methyltransferase G
BED34_21825	PF03899	BED34_21825
BED34_21830	PF00119	ATP synthase A chain
BED34_21835	PF00137	ATP synthase subunit C
BED34_21840	PF00430	ATP synthase B/B' CF(0)
BED34_21845	PF00213	ATP synthase delta (OSCP) subunit
BED34_21850	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
BED34_21850	PF00306	ATP synthase alpha/beta chain, C terminal domain
BED34_21850	PF02874	ATP synthase alpha/beta family, beta-barrel domain
BED34_21855	PF00231	ATP synthase
BED34_21860	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
BED34_21860	PF02874	ATP synthase alpha/beta family, beta-barrel domain
BED34_21865	PF00401	ATP synthase, Delta/Epsilon chain, long alpha-helix domain
BED34_21865	PF02823	ATP synthase, Delta/Epsilon chain, beta-sandwich domain
BED34_21870	PF00132	Bacterial transferase hexapeptide (six repeats)
BED34_21870	PF12804	MobA-like NTP transferase domain
BED34_21875	PF01380	SIS domain
BED34_21875	PF13522	Glutamine amidotransferase domain
BED34_21880	PF12849	PBP superfamily domain
BED34_21885	PF00528	Binding-protein-dependent transport system inner membrane component
BED34_21890	PF00528	Binding-protein-dependent transport system inner membrane component
BED34_21895	PF00005	ABC transporter
BED34_21900	PF01895	PhoU domain
BED34_21905	PF04519	BED34_21905
BED34_21910	PF00497	Bacterial extracellular solute-binding proteins, family 3
BED34_21920	PF00528	Binding-protein-dependent transport system inner membrane component
BED34_21925	PF13419	Haloacid dehalogenase-like hydrolase
BED34_21930	PF00860	Permease family
BED34_21935	PF03928	Domain of unknown function (DUF336)
BED34_21940	PF00072	Response regulator receiver domain
BED34_21940	PF00196	Bacterial regulatory proteins, luxR family
BED34_21945	PF00512	His Kinase A (phospho-acceptor) domain
BED34_21945	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BED34_21950	PF03358	NADPH-dependent FMN reductase
BED34_21955	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BED34_21955	PF02743	Cache domain
BED34_21960	PF00528	Binding-protein-dependent transport system inner membrane component
BED34_21965	PF00005	ABC transporter
BED34_21965	PF09383	NIL domain
BED34_21970	PF03180	NLPA lipoprotein
BED34_21975	PF07055	Enoyl reductase FAD binding domain
BED34_21975	PF12241	Trans-2-enoyl-CoA reductase catalytic region
BED34_21975	PF12242	NAD(P)H binding domain of trans-2-enoyl-CoA reductase
BED34_21980	PF01926	50S ribosome-binding GTPase
BED34_21980	PF10396	GTP-binding protein TrmE N-terminus
BED34_21980	PF12631	Catalytic cysteine-containing C-terminus of GTPase, MnmE
BED34_21985	PF02096	60Kd inner membrane protein
BED34_21985	PF14849	YidC periplasmic domain
BED34_21990	PF01809	BED34_21990
BED34_21995	PF00825	Ribonuclease P
BED34_22000	PF00468	Ribosomal protein L34
BED34_22010	PF05932	Tir chaperone protein (CesT) family
BED34_22025	PF05932	Tir chaperone protein (CesT) family
BED34_22030	PF03545	Yersinia virulence determinant (YopE)
BED34_22030	PF09020	YopE, N terminal
BED34_22035	PF05016	Plasmid stabilisation system protein
BED34_22040	PF03693	Uncharacterised protein family (UPF0156)
BED34_22045	PF02195	ParB-like nuclease domain
BED34_22050	PF00376	MerR family regulatory protein
BED34_22050	PF13614	AAA domain
BED34_22070	PF00665	Integrase core domain
BED34_22070	PF13276	BED34_22070
BED34_22075	PF13683	BED34_22075
BED34_22080	PF09013	YopH, N-terminal
BED34_22090	PF00665	Integrase core domain
BED34_22095	PF03895	YadA-like C-terminal region
BED34_22100	PF00892	EamA-like transporter family
BED34_22105	PF00196	Bacterial regulatory proteins, luxR family
BED34_22110	PF01526	BED34_22110
BED34_22110	PF13700	BED34_22110
BED34_22115	PF00239	Resolvase, N terminal domain
BED34_22115	PF02796	Helix-turn-helix domain of resolvase
BED34_22120	PF03960	ArsC family
BED34_22125	PF02040	BED34_22125
BED34_22130	PF01022	Bacterial regulatory protein, arsR family
BED34_22135	PF03358	NADPH-dependent FMN reductase
BED34_22150	PF07057	DNA helicase TraI
BED34_22155	PF00665	Integrase core domain
BED34_22155	PF13276	BED34_22155
BED34_22160	PF13091	PLD-like domain
BED34_22165	PF10723	Replication regulatory protein RepB
BED34_22170	PF02387	BED34_22170
BED34_22190	PF01526	BED34_22190
BED34_22195	PF00665	Integrase core domain
BED34_22200	PF01527	Transposase
BED34_22215	PF00069	Protein kinase domain
BED34_22215	PF09632	Rac1-binding domain
BED34_22220	PF03421	BED34_22220
BED34_22225	PF05818	BED34_22225
BED34_22240	PF03543	Yersinia/Haemophilus virulence surface antigen
BED34_22245	PF05932	Tir chaperone protein (CesT) family
BED34_22250	PF01527	Transposase
BED34_22255	PF00665	Integrase core domain
BED34_22255	PF13276	BED34_22255
BED34_22270	PF12468	Type III secretion system leucine rich repeat protein
BED34_22280	PF00872	BED34_22280
BED34_22285	PF05844	YopD protein
BED34_22290	PF04888	BED34_22290
BED34_22295	PF07720	Tetratricopeptide repeat
BED34_22300	PF04792	V antigen (LcrV) protein
BED34_22305	PF07216	BED34_22305
BED34_22310	PF09621	BED34_22310
BED34_22315	PF00771	FHIPEP family
BED34_22325	PF09474	BED34_22325
BED34_22335	PF09059	TyeA
BED34_22340	PF07201	HrpJ-like domain
BED34_22345	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
BED34_22345	PF02874	ATP synthase alpha/beta family, beta-barrel domain
BED34_22350	PF07321	Type III secretion protein YscO
BED34_22365	PF01052	Surface presentation of antigens (SPOA)
BED34_22370	PF00813	BED34_22370
BED34_22375	PF01313	BED34_22375
BED34_22380	PF01311	BED34_22380
BED34_22385	PF01312	FlhB HrpN YscU SpaS Family
BED34_22390	PF09619	Type III secretion system lipoprotein chaperone (YscW)
BED34_22395	PF12833	Helix-turn-helix domain
BED34_22400	PF17551	BED34_22400
BED34_22405	PF05932	Tir chaperone protein (CesT) family
BED34_22410	PF00263	BED34_22410
BED34_22410	PF03958	Bacterial type II/III secretion system short domain
BED34_22415	PF16693	BED34_22415
BED34_22420	PF08988	Protein of unknown function (DUF1895)
BED34_22425	PF09392	Type III secretion needle MxiH like
BED34_22430	PF09477	Bacterial type II secretion system chaperone protein (type_III_yscG)
BED34_22435	PF09025	YopR Core
BED34_22440	PF17001	BED34_22440
BED34_22445	PF01514	Secretory protein of YscJ/FliF family
BED34_22450	PF06578	BED34_22450
BED34_22455	PF02108	BED34_22455
BED34_22460	PF09013	YopH, N-terminal
BED34_22465	PF00102	Protein-tyrosine phosphatase
BED34_22465	PF09013	YopH, N-terminal
BED34_22470	PF05932	Tir chaperone protein (CesT) family
BED34_22485	PF05932	Tir chaperone protein (CesT) family
BED34_22490	PF03545	Yersinia virulence determinant (YopE)
BED34_22490	PF09020	YopE, N terminal
BED34_22495	PF05016	Plasmid stabilisation system protein
BED34_22500	PF03693	Uncharacterised protein family (UPF0156)
BED34_22505	PF02195	ParB-like nuclease domain
BED34_22510	PF00376	MerR family regulatory protein
BED34_22510	PF13614	AAA domain
BED34_22525	PF00665	Integrase core domain
BED34_22525	PF13276	BED34_22525
BED34_22530	PF09013	YopH, N-terminal
BED34_22540	PF00665	Integrase core domain